JV59_21095 778b5d194b4c20022f6b5be6c86a7c9f 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 7.0E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_21095 778b5d194b4c20022f6b5be6c86a7c9f 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 298 327 7.0E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_21095 778b5d194b4c20022f6b5be6c86a7c9f 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 7.0E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_21095 778b5d194b4c20022f6b5be6c86a7c9f 539 Gene3D G3DSA:3.30.450.20 37 184 5.3E-46 T 14-10-2018 JV59_21095 778b5d194b4c20022f6b5be6c86a7c9f 539 SMART SM01049 35 127 2.1E-32 T 14-10-2018 IPR033480 Single Cache domain 2 JV59_21095 778b5d194b4c20022f6b5be6c86a7c9f 539 Pfam PF00672 HAMP domain 211 259 3.7E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_21095 778b5d194b4c20022f6b5be6c86a7c9f 539 SUPERFAMILY SSF58104 230 539 9.42E-72 T 14-10-2018 JV59_21095 778b5d194b4c20022f6b5be6c86a7c9f 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 330 502 2.2E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_21095 778b5d194b4c20022f6b5be6c86a7c9f 539 Gene3D G3DSA:1.10.287.950 209 539 1.9E-72 T 14-10-2018 JV59_21095 778b5d194b4c20022f6b5be6c86a7c9f 539 SMART SM00283 277 538 1.2E-62 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_21095 778b5d194b4c20022f6b5be6c86a7c9f 539 SMART SM00304 210 262 8.6E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_21095 778b5d194b4c20022f6b5be6c86a7c9f 539 Pfam PF17200 Single Cache domain 2 40 185 1.5E-39 T 14-10-2018 IPR033480 Single Cache domain 2 JV59_31680 9290877633d2da95a79052150e066432 868 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 443 544 6.4E-35 T 14-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold JV59_31680 9290877633d2da95a79052150e066432 868 Gene3D G3DSA:1.25.50.10 545 867 9.6E-113 T 14-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily JV59_31680 9290877633d2da95a79052150e066432 868 SUPERFAMILY SSF55486 203 449 1.06E-74 T 14-10-2018 JV59_31680 9290877633d2da95a79052150e066432 868 Gene3D G3DSA:2.60.40.1730 15 193 1.8E-70 T 14-10-2018 JV59_31680 9290877633d2da95a79052150e066432 868 SUPERFAMILY SSF63737 3 192 3.92E-45 T 14-10-2018 JV59_31680 9290877633d2da95a79052150e066432 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 4.0E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JV59_31680 9290877633d2da95a79052150e066432 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 4.0E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JV59_31680 9290877633d2da95a79052150e066432 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 4.0E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JV59_31680 9290877633d2da95a79052150e066432 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 4.0E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JV59_31680 9290877633d2da95a79052150e066432 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 257 267 4.0E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JV59_31680 9290877633d2da95a79052150e066432 868 Gene3D G3DSA:1.10.390.10 279 442 1.4E-65 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily JV59_31680 9290877633d2da95a79052150e066432 868 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 547 867 1.6E-110 T 14-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal JV59_31680 9290877633d2da95a79052150e066432 868 Gene3D G3DSA:1.10.1740.60 194 278 5.2E-39 T 14-10-2018 JV59_31680 9290877633d2da95a79052150e066432 868 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 866 0.0 T 14-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 JV59_31680 9290877633d2da95a79052150e066432 868 Gene3D G3DSA:2.60.40.1840 443 544 6.7E-38 T 14-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily JV59_31680 9290877633d2da95a79052150e066432 868 Pfam PF01433 Peptidase family M1 domain 207 435 2.2E-58 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JV59_37185 e591fc2363f66f07be0bb793f07ff3d6 522 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 522 217.336 T 14-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 JV59_37185 e591fc2363f66f07be0bb793f07ff3d6 522 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 11 515 2.0E-207 T 14-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 JV59_37185 e591fc2363f66f07be0bb793f07ff3d6 522 SUPERFAMILY SSF55931 7 513 7.85E-201 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 JV59_37185 e591fc2363f66f07be0bb793f07ff3d6 522 Gene3D G3DSA:3.30.590.20 17 522 7.9E-192 T 14-10-2018 JV59_37185 e591fc2363f66f07be0bb793f07ff3d6 522 Pfam PF04262 Glutamate-cysteine ligase 14 378 2.7E-168 T 14-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 5278 5296 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 SUPERFAMILY SSF141072 663 790 2.49E-9 T 14-10-2018 IPR038081 CalX-like domain superfamily JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 SUPERFAMILY SSF141072 2048 2154 9.42E-8 T 14-10-2018 IPR038081 CalX-like domain superfamily JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 SUPERFAMILY SSF53300 4883 5042 3.5E-17 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 SUPERFAMILY SSF141072 2181 2286 1.31E-8 T 14-10-2018 IPR038081 CalX-like domain superfamily JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 PRINTS PR00313 NodO calcium binding signature 5191 5202 3.2E-8 T 14-10-2018 JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 PRINTS PR00313 NodO calcium binding signature 5309 5318 3.2E-8 T 14-10-2018 JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 PRINTS PR00313 NodO calcium binding signature 5282 5290 3.2E-8 T 14-10-2018 JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 PRINTS PR00313 NodO calcium binding signature 5264 5272 3.2E-8 T 14-10-2018 JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 Pfam PF00629 MAM domain, meprin/A5/mu 4004 4096 2.4E-5 T 14-10-2018 IPR000998 MAM domain GO:0016020 JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 SUPERFAMILY SSF141072 2453 2562 7.32E-11 T 14-10-2018 IPR038081 CalX-like domain superfamily JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 Gene3D G3DSA:2.150.10.10 5251 5398 1.0E-23 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 SUPERFAMILY SSF141072 944 1050 7.59E-8 T 14-10-2018 IPR038081 CalX-like domain superfamily JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 5287 5305 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 SUPERFAMILY SSF141072 1496 1602 9.29E-8 T 14-10-2018 IPR038081 CalX-like domain superfamily JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 Pfam PF00092 von Willebrand factor type A domain 4923 5044 3.3E-11 T 14-10-2018 IPR002035 von Willebrand factor, type A JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 SUPERFAMILY SSF141072 1772 1878 4.97E-8 T 14-10-2018 IPR038081 CalX-like domain superfamily JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 SUPERFAMILY SSF141072 525 654 1.22E-8 T 14-10-2018 IPR038081 CalX-like domain superfamily JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 SUPERFAMILY SSF141072 258 364 6.93E-6 T 14-10-2018 IPR038081 CalX-like domain superfamily JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 5269 5287 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 SUPERFAMILY SSF141072 3403 3525 1.44E-7 T 14-10-2018 IPR038081 CalX-like domain superfamily JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 SUPERFAMILY SSF141072 390 492 3.01E-6 T 14-10-2018 IPR038081 CalX-like domain superfamily JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 SUPERFAMILY SSF51120 5188 5387 4.81E-28 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 Pfam PF03160 Calx-beta domain 3323 3361 130.0 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 Pfam PF03160 Calx-beta domain 462 491 8.1 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 Pfam PF03160 Calx-beta domain 742 769 1.5 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 Pfam PF03160 Calx-beta domain 3392 3467 15.0 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 Pfam PF03160 Calx-beta domain 2305 2371 4.1 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 Pfam PF03160 Calx-beta domain 935 1001 3.4 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 Pfam PF03160 Calx-beta domain 2039 2105 5.8 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 Pfam PF03160 Calx-beta domain 1212 1277 13.0 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 Pfam PF03160 Calx-beta domain 2173 2238 5.0 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 Pfam PF03160 Calx-beta domain 2485 2541 4.7 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 Pfam PF03160 Calx-beta domain 1763 1829 7.0 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 Pfam PF03160 Calx-beta domain 3200 3243 41.0 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 Pfam PF03160 Calx-beta domain 1488 1553 5.0 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 Pfam PF03160 Calx-beta domain 602 631 0.28 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 SUPERFAMILY SSF141072 2314 2420 2.49E-8 T 14-10-2018 IPR038081 CalX-like domain superfamily JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 Gene3D G3DSA:2.60.120.200 3986 4102 1.3E-5 T 14-10-2018 JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 SUPERFAMILY SSF141072 1220 1324 2.49E-7 T 14-10-2018 IPR038081 CalX-like domain superfamily JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 Gene3D G3DSA:2.60.40.10 152 248 1.5E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 SMART SM00327 4921 5140 0.0014 T 14-10-2018 IPR002035 von Willebrand factor, type A JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 SUPERFAMILY SSF141072 3264 3377 6.15E-8 T 14-10-2018 IPR038081 CalX-like domain superfamily JV59_31805 b9f549b9d2bf2764639fb8480bd6e499 5420 Gene3D G3DSA:3.40.50.410 4918 5063 5.0E-15 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JV59_36660 80a3305fe8df529a2feed25390b38738 311 SMART SM00904 183 307 1.3E-62 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 JV59_36660 80a3305fe8df529a2feed25390b38738 311 Gene3D G3DSA:2.40.30.30 188 311 1.8E-39 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 JV59_36660 80a3305fe8df529a2feed25390b38738 311 Pfam PF01687 Riboflavin kinase 184 306 9.1E-38 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 JV59_36660 80a3305fe8df529a2feed25390b38738 311 PIRSF PIRSF004491 1 311 9.6E-108 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 JV59_36660 80a3305fe8df529a2feed25390b38738 311 SUPERFAMILY SSF52374 16 175 5.04E-35 T 14-10-2018 JV59_36660 80a3305fe8df529a2feed25390b38738 311 Pfam PF06574 FAD synthetase 12 167 7.8E-59 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 JV59_36660 80a3305fe8df529a2feed25390b38738 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 2.1E-107 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 JV59_36660 80a3305fe8df529a2feed25390b38738 311 Gene3D G3DSA:3.40.50.620 1 187 3.3E-62 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_36660 80a3305fe8df529a2feed25390b38738 311 SUPERFAMILY SSF82114 174 308 5.01E-45 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 JV59_28205 f037aedf76b42db2f3229379989db28a 399 Pfam PF07670 Nucleoside recognition 87 182 9.7E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 JV59_28205 f037aedf76b42db2f3229379989db28a 399 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 1 395 1.1E-134 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 JV59_28205 f037aedf76b42db2f3229379989db28a 399 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 189 396 1.9E-72 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 JV59_28205 f037aedf76b42db2f3229379989db28a 399 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 1.9E-24 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 JV59_33415 7d9303a0b88d66b7e4913b89810808de 151 Pfam PF05099 Tellurite resistance protein TerB 21 143 1.7E-38 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal JV59_33415 7d9303a0b88d66b7e4913b89810808de 151 SUPERFAMILY SSF158682 3 147 1.7E-30 T 14-10-2018 IPR029024 TerB-like JV59_33415 7d9303a0b88d66b7e4913b89810808de 151 Gene3D G3DSA:1.10.3680.10 16 139 6.1E-19 T 14-10-2018 IPR029024 TerB-like JV59_16650 151d7629d75f6e01caabbe2c375d1497 390 Pfam PF00042 Globin 8 102 1.4E-12 T 14-10-2018 IPR000971 Globin GO:0020037 JV59_16650 151d7629d75f6e01caabbe2c375d1497 390 SUPERFAMILY SSF63380 152 259 7.15E-26 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JV59_16650 151d7629d75f6e01caabbe2c375d1497 390 Pfam PF00970 Oxidoreductase FAD-binding domain 157 259 2.6E-10 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 JV59_16650 151d7629d75f6e01caabbe2c375d1497 390 Gene3D G3DSA:2.40.30.10 152 258 2.6E-34 T 14-10-2018 JV59_16650 151d7629d75f6e01caabbe2c375d1497 390 Pfam PF00175 Oxidoreductase NAD-binding domain 268 366 1.6E-13 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 JV59_16650 151d7629d75f6e01caabbe2c375d1497 390 PRINTS PR00410 Phenol hydroxylase reductase family signature 267 286 2.6E-10 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JV59_16650 151d7629d75f6e01caabbe2c375d1497 390 PRINTS PR00410 Phenol hydroxylase reductase family signature 252 261 2.6E-10 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JV59_16650 151d7629d75f6e01caabbe2c375d1497 390 PRINTS PR00410 Phenol hydroxylase reductase family signature 185 197 2.6E-10 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JV59_16650 151d7629d75f6e01caabbe2c375d1497 390 PRINTS PR00410 Phenol hydroxylase reductase family signature 352 360 2.6E-10 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JV59_16650 151d7629d75f6e01caabbe2c375d1497 390 Gene3D G3DSA:1.10.490.10 1 144 3.8E-53 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 JV59_16650 151d7629d75f6e01caabbe2c375d1497 390 SUPERFAMILY SSF46458 2 143 6.48E-39 T 14-10-2018 IPR009050 Globin-like superfamily JV59_16650 151d7629d75f6e01caabbe2c375d1497 390 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 267 286 1.8E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JV59_16650 151d7629d75f6e01caabbe2c375d1497 390 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 352 360 1.8E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JV59_16650 151d7629d75f6e01caabbe2c375d1497 390 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 185 195 1.8E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JV59_16650 151d7629d75f6e01caabbe2c375d1497 390 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 206 213 1.8E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JV59_16650 151d7629d75f6e01caabbe2c375d1497 390 SUPERFAMILY SSF52343 258 387 2.1E-31 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JV59_16650 151d7629d75f6e01caabbe2c375d1497 390 Hamap MF_01252 Flavohemoprotein [hmp]. 1 390 51.702 T 14-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 JV59_16650 151d7629d75f6e01caabbe2c375d1497 390 Gene3D G3DSA:3.40.50.80 259 389 7.7E-31 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 SUPERFAMILY SSF52172 690 816 1.57E-37 T 14-10-2018 IPR011006 CheY-like superfamily JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 Gene3D G3DSA:1.10.287.130 280 363 6.9E-29 T 14-10-2018 JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 Gene3D G3DSA:1.20.120.160 853 966 7.4E-17 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 SUPERFAMILY SSF55874 354 524 1.57E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 Pfam PF00512 His Kinase A (phospho-acceptor) domain 301 365 3.0E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 SMART SM00387 412 528 1.6E-39 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 Gene3D G3DSA:3.40.50.2300 680 826 2.1E-42 T 14-10-2018 JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 SMART SM00448 694 812 3.9E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 SMART SM00448 546 665 1.5E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 SUPERFAMILY SSF47226 795 947 3.01E-16 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 SMART SM00091 163 229 2.6E-7 T 14-10-2018 IPR000014 PAS domain JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 160 287 1.1E-12 T 14-10-2018 IPR000014 PAS domain JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 SUPERFAMILY SSF55785 150 278 1.54E-15 T 14-10-2018 IPR035965 PAS domain superfamily JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 Pfam PF00989 PAS fold 166 276 5.2E-10 T 14-10-2018 IPR013767 PAS fold GO:0006355 JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 Gene3D G3DSA:3.30.565.10 364 528 9.2E-51 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 506 1.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 525 1.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 467 1.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 481 1.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 SUPERFAMILY SSF52172 544 670 3.27E-25 T 14-10-2018 IPR011006 CheY-like superfamily JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 SUPERFAMILY SSF47384 285 366 6.08E-23 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 412 524 2.1E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 Pfam PF01627 Hpt domain 878 944 8.3E-9 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 Gene3D G3DSA:3.40.50.2300 545 670 9.2E-27 T 14-10-2018 JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 Gene3D G3DSA:3.30.450.20 157 279 1.9E-15 T 14-10-2018 JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 Pfam PF00072 Response regulator receiver domain 549 663 2.0E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 Pfam PF00072 Response regulator receiver domain 696 812 2.0E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_20080 90749bb9363e63a8c0437de8b1936667 1057 SMART SM00388 300 365 1.4E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_31095 3c312a90fc83c99600a9725293a4d730 223 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 211 2.1E-54 T 14-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain JV59_28200 ae2675f354a21b78df48d6361f3e56bf 315 Gene3D G3DSA:1.10.10.10 5 92 1.2E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_28200 ae2675f354a21b78df48d6361f3e56bf 315 Gene3D G3DSA:3.40.190.10 94 292 1.3E-59 T 14-10-2018 JV59_28200 ae2675f354a21b78df48d6361f3e56bf 315 Pfam PF03466 LysR substrate binding domain 90 295 1.8E-44 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_28200 ae2675f354a21b78df48d6361f3e56bf 315 SUPERFAMILY SSF53850 90 299 3.26E-46 T 14-10-2018 JV59_28200 ae2675f354a21b78df48d6361f3e56bf 315 SUPERFAMILY SSF46785 7 90 3.46E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_28200 ae2675f354a21b78df48d6361f3e56bf 315 Gene3D G3DSA:3.40.190.10 165 267 1.3E-59 T 14-10-2018 JV59_28200 ae2675f354a21b78df48d6361f3e56bf 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.9E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_35995 edccaf77b816d6ff6e65d6e1e72f73e8 1153 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1149 20.749 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 JV59_35995 edccaf77b816d6ff6e65d6e1e72f73e8 1153 SUPERFAMILY SSF52540 365 816 6.37E-102 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_35995 edccaf77b816d6ff6e65d6e1e72f73e8 1153 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1111 0.0 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 JV59_35995 edccaf77b816d6ff6e65d6e1e72f73e8 1153 Gene3D G3DSA:3.40.50.10930 4 321 1.2E-126 T 14-10-2018 JV59_35995 edccaf77b816d6ff6e65d6e1e72f73e8 1153 Gene3D G3DSA:1.10.10.160 79 187 1.2E-126 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily JV59_35995 edccaf77b816d6ff6e65d6e1e72f73e8 1153 Gene3D G3DSA:3.40.50.300 339 812 6.6E-193 T 14-10-2018 JV59_35995 edccaf77b816d6ff6e65d6e1e72f73e8 1153 Gene3D G3DSA:1.10.486.10 457 669 6.6E-193 T 14-10-2018 JV59_35995 edccaf77b816d6ff6e65d6e1e72f73e8 1153 SUPERFAMILY SSF52540 2 351 2.39E-123 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_35995 edccaf77b816d6ff6e65d6e1e72f73e8 1153 SUPERFAMILY SSF52980 832 1136 9.12E-75 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JV59_35995 edccaf77b816d6ff6e65d6e1e72f73e8 1153 PIRSF PIRSF000980 1 1151 0.0 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 JV59_35995 edccaf77b816d6ff6e65d6e1e72f73e8 1153 Gene3D G3DSA:1.10.10.990 873 951 2.6E-21 T 14-10-2018 JV59_35995 edccaf77b816d6ff6e65d6e1e72f73e8 1153 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 810 3.5E-302 T 14-10-2018 JV59_18450 782e3c3f68cc57237fa4eec70bac9ca9 300 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 296 4.6E-123 T 14-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 JV59_18450 782e3c3f68cc57237fa4eec70bac9ca9 300 SUPERFAMILY SSF51735 3 167 1.6E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_18450 782e3c3f68cc57237fa4eec70bac9ca9 300 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 169 295 3.2E-29 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 JV59_18450 782e3c3f68cc57237fa4eec70bac9ca9 300 PIRSF PIRSF000103 1 300 5.6E-77 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 JV59_18450 782e3c3f68cc57237fa4eec70bac9ca9 300 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 166 7.1E-53 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 JV59_18450 782e3c3f68cc57237fa4eec70bac9ca9 300 Gene3D G3DSA:3.40.50.720 1 167 1.5E-54 T 14-10-2018 JV59_18450 782e3c3f68cc57237fa4eec70bac9ca9 300 SUPERFAMILY SSF48179 168 297 5.44E-38 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JV59_18450 782e3c3f68cc57237fa4eec70bac9ca9 300 Gene3D G3DSA:1.10.1040.10 169 300 2.2E-41 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JV59_18450 782e3c3f68cc57237fa4eec70bac9ca9 300 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 JV59_26555 63f6a1dc92f440fc4f3e47982eadf3d6 117 Gene3D G3DSA:3.30.1130.10 1 115 3.8E-45 T 14-10-2018 JV59_26555 63f6a1dc92f440fc4f3e47982eadf3d6 117 SMART SM00905 4 114 9.1E-48 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 JV59_26555 63f6a1dc92f440fc4f3e47982eadf3d6 117 Pfam PF02152 Dihydroneopterin aldolase 4 113 1.2E-31 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 JV59_26555 63f6a1dc92f440fc4f3e47982eadf3d6 117 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 1.0E-28 T 14-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 JV59_26555 63f6a1dc92f440fc4f3e47982eadf3d6 117 TIGRFAM TIGR00526 folB_dom: FolB domain 1 115 3.6E-36 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 JV59_26555 63f6a1dc92f440fc4f3e47982eadf3d6 117 SUPERFAMILY SSF55620 1 114 2.45E-36 T 14-10-2018 JV59_20270 c5187d1adcf696909f8eb9700ceb941e 134 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 121 7.2E-17 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JV59_20270 c5187d1adcf696909f8eb9700ceb941e 134 SUPERFAMILY SSF54593 9 127 3.76E-27 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_20270 c5187d1adcf696909f8eb9700ceb941e 134 Gene3D G3DSA:3.10.180.10 3 133 8.0E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_00130 d8f1bd1a496c4249d6f18fc082ffcd52 461 SMART SM00304 189 242 1.6E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_00130 d8f1bd1a496c4249d6f18fc082ffcd52 461 SMART SM00388 243 305 2.6E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_00130 d8f1bd1a496c4249d6f18fc082ffcd52 461 Gene3D G3DSA:3.30.565.10 308 458 1.7E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_00130 d8f1bd1a496c4249d6f18fc082ffcd52 461 Gene3D G3DSA:1.10.287.130 193 306 1.8E-34 T 14-10-2018 JV59_00130 d8f1bd1a496c4249d6f18fc082ffcd52 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 412 2.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_00130 d8f1bd1a496c4249d6f18fc082ffcd52 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 2.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_00130 d8f1bd1a496c4249d6f18fc082ffcd52 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 2.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_00130 d8f1bd1a496c4249d6f18fc082ffcd52 461 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 303 1.7E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_00130 d8f1bd1a496c4249d6f18fc082ffcd52 461 Pfam PF00672 HAMP domain 190 237 3.3E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_00130 d8f1bd1a496c4249d6f18fc082ffcd52 461 SUPERFAMILY SSF47384 229 303 7.26E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_00130 d8f1bd1a496c4249d6f18fc082ffcd52 461 SMART SM00387 349 459 1.4E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_00130 d8f1bd1a496c4249d6f18fc082ffcd52 461 Gene3D G3DSA:3.30.450.210 31 156 2.9E-50 T 14-10-2018 IPR038515 CpxA, periplasmic domain superfamily JV59_00130 d8f1bd1a496c4249d6f18fc082ffcd52 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 457 6.1E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_00130 d8f1bd1a496c4249d6f18fc082ffcd52 461 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 36 167 4.7E-55 T 14-10-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain JV59_00130 d8f1bd1a496c4249d6f18fc082ffcd52 461 SUPERFAMILY SSF55874 295 458 7.07E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_16910 f5810c6033d93ad0fa4c46cb07224958 603 SMART SM00267 429 597 1.9E-48 T 14-10-2018 IPR000160 GGDEF domain JV59_16910 f5810c6033d93ad0fa4c46cb07224958 603 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 441 597 4.9E-44 T 14-10-2018 IPR000160 GGDEF domain JV59_16910 f5810c6033d93ad0fa4c46cb07224958 603 Gene3D G3DSA:1.20.1480.50 348 436 5.4E-8 T 14-10-2018 JV59_16910 f5810c6033d93ad0fa4c46cb07224958 603 Pfam PF00990 Diguanylate cyclase, GGDEF domain 443 593 5.1E-37 T 14-10-2018 IPR000160 GGDEF domain JV59_16910 f5810c6033d93ad0fa4c46cb07224958 603 Gene3D G3DSA:3.30.70.270 437 601 2.6E-46 T 14-10-2018 JV59_16910 f5810c6033d93ad0fa4c46cb07224958 603 SUPERFAMILY SSF55073 445 597 1.1E-40 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_26965 1cea8ffde019f298a54758a5ed91dacc 192 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.174 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 JV59_26965 1cea8ffde019f298a54758a5ed91dacc 192 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 5.1E-82 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 JV59_26965 1cea8ffde019f298a54758a5ed91dacc 192 Pfam PF13580 SIS domain 24 146 1.9E-31 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 JV59_26965 1cea8ffde019f298a54758a5ed91dacc 192 Gene3D G3DSA:3.40.50.10490 1 191 1.2E-71 T 14-10-2018 JV59_26965 1cea8ffde019f298a54758a5ed91dacc 192 SUPERFAMILY SSF53697 1 190 3.24E-52 T 14-10-2018 JV59_39610 656ed568effcfc5a38e104dec24529bd 78 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 3.4E-21 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 JV59_39610 656ed568effcfc5a38e104dec24529bd 78 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 77 25.365 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 JV59_39610 656ed568effcfc5a38e104dec24529bd 78 Pfam PF02416 mttA/Hcf106 family 4 49 7.4E-13 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 JV59_18915 815e4e80fb89ddda539bf044cc409b17 399 Gene3D G3DSA:3.30.390.10 6 396 1.2E-169 T 14-10-2018 IPR029017 Enolase-like, N-terminal JV59_18915 815e4e80fb89ddda539bf044cc409b17 399 Gene3D G3DSA:3.20.20.120 109 363 1.2E-169 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily JV59_18915 815e4e80fb89ddda539bf044cc409b17 399 SMART SM00922 132 252 5.7E-7 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal JV59_18915 815e4e80fb89ddda539bf044cc409b17 399 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 89 114 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 JV59_18915 815e4e80fb89ddda539bf044cc409b17 399 Pfam PF13378 Enolase C-terminal domain-like 146 372 4.6E-37 T 14-10-2018 IPR029065 Enolase C-terminal domain-like JV59_18915 815e4e80fb89ddda539bf044cc409b17 399 SUPERFAMILY SSF54826 6 116 3.68E-29 T 14-10-2018 JV59_18915 815e4e80fb89ddda539bf044cc409b17 399 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 17 114 1.9E-23 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain JV59_18915 815e4e80fb89ddda539bf044cc409b17 399 SUPERFAMILY SSF51604 102 379 4.72E-64 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily JV59_36920 4a7828f53217e1c2dd295c42ee9b0265 927 SMART SM00448 664 777 8.7E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_36920 4a7828f53217e1c2dd295c42ee9b0265 927 SMART SM00073 824 922 1.9E-8 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 JV59_36920 4a7828f53217e1c2dd295c42ee9b0265 927 Pfam PF01627 Hpt domain 834 917 3.6E-12 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 JV59_36920 4a7828f53217e1c2dd295c42ee9b0265 927 SUPERFAMILY SSF52172 532 644 2.56E-8 T 14-10-2018 IPR011006 CheY-like superfamily JV59_36920 4a7828f53217e1c2dd295c42ee9b0265 927 SMART SM00388 289 354 6.6E-25 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_36920 4a7828f53217e1c2dd295c42ee9b0265 927 SMART SM00387 401 517 3.3E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_36920 4a7828f53217e1c2dd295c42ee9b0265 927 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 470 1.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_36920 4a7828f53217e1c2dd295c42ee9b0265 927 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 514 1.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_36920 4a7828f53217e1c2dd295c42ee9b0265 927 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 456 1.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_36920 4a7828f53217e1c2dd295c42ee9b0265 927 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 495 1.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_36920 4a7828f53217e1c2dd295c42ee9b0265 927 Gene3D G3DSA:3.40.50.2300 652 787 3.2E-38 T 14-10-2018 JV59_36920 4a7828f53217e1c2dd295c42ee9b0265 927 SUPERFAMILY SSF55874 343 515 2.75E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_36920 4a7828f53217e1c2dd295c42ee9b0265 927 Pfam PF00512 His Kinase A (phospho-acceptor) domain 290 354 1.0E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_36920 4a7828f53217e1c2dd295c42ee9b0265 927 Pfam PF00072 Response regulator receiver domain 666 776 9.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_36920 4a7828f53217e1c2dd295c42ee9b0265 927 Gene3D G3DSA:1.10.287.130 275 355 6.9E-27 T 14-10-2018 JV59_36920 4a7828f53217e1c2dd295c42ee9b0265 927 SUPERFAMILY SSF158472 199 246 1.7E-6 T 14-10-2018 JV59_36920 4a7828f53217e1c2dd295c42ee9b0265 927 SUPERFAMILY SSF52172 663 781 1.37E-35 T 14-10-2018 IPR011006 CheY-like superfamily JV59_36920 4a7828f53217e1c2dd295c42ee9b0265 927 SMART SM00304 197 249 1.1E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_36920 4a7828f53217e1c2dd295c42ee9b0265 927 SUPERFAMILY SSF47384 274 355 1.16E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_36920 4a7828f53217e1c2dd295c42ee9b0265 927 Gene3D G3DSA:1.20.1480.50 164 269 2.3E-7 T 14-10-2018 JV59_36920 4a7828f53217e1c2dd295c42ee9b0265 927 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 174 3.1E-49 T 14-10-2018 IPR019247 Histidine kinase BarA, N-terminal JV59_36920 4a7828f53217e1c2dd295c42ee9b0265 927 Gene3D G3DSA:1.20.120.160 812 925 4.7E-31 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_36920 4a7828f53217e1c2dd295c42ee9b0265 927 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 401 516 6.6E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_36920 4a7828f53217e1c2dd295c42ee9b0265 927 Gene3D G3DSA:3.30.565.10 356 520 1.4E-51 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_36920 4a7828f53217e1c2dd295c42ee9b0265 927 SUPERFAMILY SSF47226 760 917 9.68E-23 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_31050 e47b1f5813415775a02186e241fa863e 345 Gene3D G3DSA:3.40.190.10 29 312 5.0E-121 T 14-10-2018 JV59_31050 e47b1f5813415775a02186e241fa863e 345 Pfam PF13416 Bacterial extracellular solute-binding protein 40 311 1.6E-41 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein JV59_31050 e47b1f5813415775a02186e241fa863e 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 7.5E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_31050 e47b1f5813415775a02186e241fa863e 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 245 264 7.5E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_31050 e47b1f5813415775a02186e241fa863e 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 146 160 7.5E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_31050 e47b1f5813415775a02186e241fa863e 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 7.5E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_31050 e47b1f5813415775a02186e241fa863e 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 7.5E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_31050 e47b1f5813415775a02186e241fa863e 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 7.5E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_31050 e47b1f5813415775a02186e241fa863e 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 164 183 7.5E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_31050 e47b1f5813415775a02186e241fa863e 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 7.5E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_31050 e47b1f5813415775a02186e241fa863e 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 290 316 7.5E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_31050 e47b1f5813415775a02186e241fa863e 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 201 220 7.5E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_31050 e47b1f5813415775a02186e241fa863e 345 SUPERFAMILY SSF53850 24 342 8.89E-93 T 14-10-2018 JV59_31050 e47b1f5813415775a02186e241fa863e 345 PIRSF PIRSF019574 1 345 1.6E-125 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_31050 e47b1f5813415775a02186e241fa863e 345 Gene3D G3DSA:3.40.190.10 129 318 5.0E-121 T 14-10-2018 JV59_01800 ffa43227ebfd972ecb6a19397730f3d6 679 SMART SM00052 420 666 7.5E-108 T 14-10-2018 IPR001633 EAL domain JV59_01800 ffa43227ebfd972ecb6a19397730f3d6 679 ProSitePatterns PS00284 Serpins signature. 13 23 - T 14-10-2018 IPR023795 Serpin, conserved site JV59_01800 ffa43227ebfd972ecb6a19397730f3d6 679 SMART SM00091 131 198 2.6 T 14-10-2018 IPR000014 PAS domain JV59_01800 ffa43227ebfd972ecb6a19397730f3d6 679 SMART SM00091 8 74 0.0011 T 14-10-2018 IPR000014 PAS domain JV59_01800 ffa43227ebfd972ecb6a19397730f3d6 679 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 252 407 2.1E-37 T 14-10-2018 IPR000160 GGDEF domain JV59_01800 ffa43227ebfd972ecb6a19397730f3d6 679 Pfam PF08448 PAS fold 16 120 4.2E-7 T 14-10-2018 IPR013656 PAS fold-4 JV59_01800 ffa43227ebfd972ecb6a19397730f3d6 679 Pfam PF00563 EAL domain 427 661 1.0E-72 T 14-10-2018 IPR001633 EAL domain JV59_01800 ffa43227ebfd972ecb6a19397730f3d6 679 Gene3D G3DSA:3.30.450.20 128 241 1.6E-6 T 14-10-2018 JV59_01800 ffa43227ebfd972ecb6a19397730f3d6 679 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 120 4.5E-7 T 14-10-2018 IPR000014 PAS domain JV59_01800 ffa43227ebfd972ecb6a19397730f3d6 679 SMART SM00267 243 410 3.0E-58 T 14-10-2018 IPR000160 GGDEF domain JV59_01800 ffa43227ebfd972ecb6a19397730f3d6 679 Pfam PF00990 Diguanylate cyclase, GGDEF domain 253 406 1.4E-42 T 14-10-2018 IPR000160 GGDEF domain JV59_01800 ffa43227ebfd972ecb6a19397730f3d6 679 SUPERFAMILY SSF55785 5 112 1.05E-8 T 14-10-2018 IPR035965 PAS domain superfamily JV59_01800 ffa43227ebfd972ecb6a19397730f3d6 679 SUPERFAMILY SSF141868 427 675 2.88E-85 T 14-10-2018 IPR035919 EAL domain superfamily JV59_01800 ffa43227ebfd972ecb6a19397730f3d6 679 SUPERFAMILY SSF55785 118 184 4.38E-6 T 14-10-2018 IPR035965 PAS domain superfamily JV59_01800 ffa43227ebfd972ecb6a19397730f3d6 679 SUPERFAMILY SSF55073 258 412 1.02E-46 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_01800 ffa43227ebfd972ecb6a19397730f3d6 679 Pfam PF13188 PAS domain 132 179 6.9E-6 T 14-10-2018 IPR000014 PAS domain JV59_01800 ffa43227ebfd972ecb6a19397730f3d6 679 Gene3D G3DSA:3.20.20.450 421 675 4.2E-95 T 14-10-2018 IPR035919 EAL domain superfamily JV59_01800 ffa43227ebfd972ecb6a19397730f3d6 679 Gene3D G3DSA:3.30.450.20 3 127 3.5E-10 T 14-10-2018 JV59_01800 ffa43227ebfd972ecb6a19397730f3d6 679 Gene3D G3DSA:3.30.70.270 253 416 1.0E-50 T 14-10-2018 JV59_23365 10acb0c58cf6a7119999cbc6c7af4042 297 Gene3D G3DSA:1.10.10.10 5 69 6.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_23365 10acb0c58cf6a7119999cbc6c7af4042 297 Gene3D G3DSA:3.40.190.10 163 268 2.3E-15 T 14-10-2018 JV59_23365 10acb0c58cf6a7119999cbc6c7af4042 297 Pfam PF03466 LysR substrate binding domain 89 288 3.1E-21 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_23365 10acb0c58cf6a7119999cbc6c7af4042 297 SUPERFAMILY SSF53850 88 290 3.44E-23 T 14-10-2018 JV59_23365 10acb0c58cf6a7119999cbc6c7af4042 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 7.7E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_23365 10acb0c58cf6a7119999cbc6c7af4042 297 Gene3D G3DSA:3.40.190.10 91 282 2.3E-15 T 14-10-2018 JV59_23365 10acb0c58cf6a7119999cbc6c7af4042 297 SUPERFAMILY SSF46785 2 110 1.93E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_23365 10acb0c58cf6a7119999cbc6c7af4042 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_23365 10acb0c58cf6a7119999cbc6c7af4042 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_23365 10acb0c58cf6a7119999cbc6c7af4042 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_36180 e01799ac472222fc4b76c8204b624d19 343 SUPERFAMILY SSF51161 90 323 1.94E-33 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JV59_36180 e01799ac472222fc4b76c8204b624d19 343 Gene3D G3DSA:3.30.70.2010 1 130 2.3E-38 T 14-10-2018 JV59_36180 e01799ac472222fc4b76c8204b624d19 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 45.871 T 14-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 JV59_36180 e01799ac472222fc4b76c8204b624d19 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 2.8E-11 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_36180 e01799ac472222fc4b76c8204b624d19 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 343 6.3E-179 T 14-10-2018 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 JV59_36180 e01799ac472222fc4b76c8204b624d19 343 Gene3D G3DSA:2.160.10.10 172 343 2.2E-68 T 14-10-2018 JV59_36180 e01799ac472222fc4b76c8204b624d19 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 6.9E-16 T 14-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 JV59_36180 e01799ac472222fc4b76c8204b624d19 343 Gene3D G3DSA:3.30.60.70 131 171 1.1E-20 T 14-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 JV59_32775 650609d2eec43abf961e1f5985176cfc 154 SUPERFAMILY SSF55729 1 154 1.54E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_32775 650609d2eec43abf961e1f5985176cfc 154 Gene3D G3DSA:3.40.630.30 1 154 4.5E-29 T 14-10-2018 JV59_32775 650609d2eec43abf961e1f5985176cfc 154 Pfam PF13673 Acetyltransferase (GNAT) domain 30 153 4.7E-16 T 14-10-2018 IPR000182 GNAT domain JV59_37800 a7cce014599a851da5a362b0f6ba5fe0 129 SUPERFAMILY SSF53137 14 129 6.54E-48 T 14-10-2018 JV59_37800 a7cce014599a851da5a362b0f6ba5fe0 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.665 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 JV59_37800 a7cce014599a851da5a362b0f6ba5fe0 129 Pfam PF00411 Ribosomal protein S11 19 128 1.5E-52 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 JV59_37800 a7cce014599a851da5a362b0f6ba5fe0 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.2E-55 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_37800 a7cce014599a851da5a362b0f6ba5fe0 129 PIRSF PIRSF002131 1 129 2.1E-52 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 JV59_37800 a7cce014599a851da5a362b0f6ba5fe0 129 Gene3D G3DSA:3.30.420.80 1 129 3.3E-57 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 JV59_37800 a7cce014599a851da5a362b0f6ba5fe0 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site JV59_16685 f206f6b8cb298d4102869a84468b2df4 388 Gene3D G3DSA:2.60.410.10 279 369 3.5E-28 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JV59_16685 f206f6b8cb298d4102869a84468b2df4 388 SUPERFAMILY SSF69189 279 371 1.0E-24 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JV59_16685 f206f6b8cb298d4102869a84468b2df4 388 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 279 369 4.1E-25 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JV59_16685 f206f6b8cb298d4102869a84468b2df4 388 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 259 6.1E-85 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 JV59_16685 f206f6b8cb298d4102869a84468b2df4 388 SUPERFAMILY SSF56601 5 279 2.82E-84 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JV59_16685 f206f6b8cb298d4102869a84468b2df4 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 4.3E-18 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JV59_16685 f206f6b8cb298d4102869a84468b2df4 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 118 135 4.3E-18 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JV59_16685 f206f6b8cb298d4102869a84468b2df4 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 145 158 4.3E-18 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JV59_16685 f206f6b8cb298d4102869a84468b2df4 388 SMART SM00936 279 369 1.7E-32 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JV59_16685 f206f6b8cb298d4102869a84468b2df4 388 Gene3D G3DSA:3.40.710.10 17 277 2.3E-90 T 14-10-2018 JV59_36695 7420e1277b849623de2f9646c7c0a10f 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 32.464 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 JV59_36695 7420e1277b849623de2f9646c7c0a10f 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 9.7E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 JV59_36695 7420e1277b849623de2f9646c7c0a10f 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 9.7E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 JV59_36695 7420e1277b849623de2f9646c7c0a10f 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 9.7E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 JV59_36695 7420e1277b849623de2f9646c7c0a10f 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 9.7E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 JV59_36695 7420e1277b849623de2f9646c7c0a10f 283 Gene3D G3DSA:3.30.572.10 1 283 5.3E-79 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 JV59_36695 7420e1277b849623de2f9646c7c0a10f 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 9.2E-41 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 JV59_36695 7420e1277b849623de2f9646c7c0a10f 283 Pfam PF00303 Thymidylate synthase 2 283 8.9E-73 T 14-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 JV59_36695 7420e1277b849623de2f9646c7c0a10f 283 SUPERFAMILY SSF55831 2 283 2.22E-91 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 JV59_36695 7420e1277b849623de2f9646c7c0a10f 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 14-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 JV59_19500 e3fd0a48ec1c4697b3dd3c0f1b213f30 208 ProSitePatterns PS00194 Thioredoxin family active site. 46 64 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 JV59_19500 e3fd0a48ec1c4697b3dd3c0f1b213f30 208 Pfam PF13462 Thioredoxin 46 200 8.2E-9 T 14-10-2018 IPR012336 Thioredoxin-like fold JV59_19500 e3fd0a48ec1c4697b3dd3c0f1b213f30 208 SUPERFAMILY SSF52833 43 202 1.69E-25 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_19500 e3fd0a48ec1c4697b3dd3c0f1b213f30 208 Gene3D G3DSA:3.40.30.10 23 205 7.6E-41 T 14-10-2018 JV59_21715 9db34e8519ddd66cfc107e92dc47f185 376 SMART SM00267 201 372 8.9E-37 T 14-10-2018 IPR000160 GGDEF domain JV59_21715 9db34e8519ddd66cfc107e92dc47f185 376 Gene3D G3DSA:3.30.70.270 209 370 5.6E-43 T 14-10-2018 JV59_21715 9db34e8519ddd66cfc107e92dc47f185 376 SUPERFAMILY SSF55073 218 363 1.1E-40 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_21715 9db34e8519ddd66cfc107e92dc47f185 376 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 211 364 3.9E-33 T 14-10-2018 IPR000160 GGDEF domain JV59_21715 9db34e8519ddd66cfc107e92dc47f185 376 Pfam PF00990 Diguanylate cyclase, GGDEF domain 214 361 1.8E-35 T 14-10-2018 IPR000160 GGDEF domain JV59_24040 6811b689936b7c4bf3c545a53792582d 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 385 8.7E-12 T 14-10-2018 IPR000160 GGDEF domain JV59_24040 6811b689936b7c4bf3c545a53792582d 636 Pfam PF16448 LapD/MoxY periplasmic domain 23 146 6.6E-37 T 14-10-2018 IPR032244 LapD/MoxY, periplasmic domain JV59_24040 6811b689936b7c4bf3c545a53792582d 636 SMART SM00052 403 635 3.3E-11 T 14-10-2018 IPR001633 EAL domain JV59_24040 6811b689936b7c4bf3c545a53792582d 636 SMART SM00267 226 390 1.1E-7 T 14-10-2018 IPR000160 GGDEF domain JV59_24040 6811b689936b7c4bf3c545a53792582d 636 SUPERFAMILY SSF141868 411 635 1.03E-42 T 14-10-2018 IPR035919 EAL domain superfamily JV59_24040 6811b689936b7c4bf3c545a53792582d 636 Gene3D G3DSA:3.30.70.270 223 390 1.8E-19 T 14-10-2018 JV59_24040 6811b689936b7c4bf3c545a53792582d 636 Gene3D G3DSA:3.30.1040.50 102 150 1.5E-16 T 14-10-2018 JV59_24040 6811b689936b7c4bf3c545a53792582d 636 Gene3D G3DSA:3.20.20.450 401 636 7.0E-42 T 14-10-2018 IPR035919 EAL domain superfamily JV59_24040 6811b689936b7c4bf3c545a53792582d 636 Pfam PF00563 EAL domain 411 634 6.7E-43 T 14-10-2018 IPR001633 EAL domain JV59_24040 6811b689936b7c4bf3c545a53792582d 636 SUPERFAMILY SSF55073 243 385 8.63E-16 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_27755 914c15e927b798eac03e4d1ad01af7b4 128 Pfam PF02561 Flagellar protein FliS 7 122 3.8E-34 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 JV59_27755 914c15e927b798eac03e4d1ad01af7b4 128 SUPERFAMILY SSF101116 8 125 5.36E-35 T 14-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 JV59_27755 914c15e927b798eac03e4d1ad01af7b4 128 PIRSF PIRSF039090 1 128 8.3E-40 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 JV59_27755 914c15e927b798eac03e4d1ad01af7b4 128 Gene3D G3DSA:1.20.120.340 1 127 3.9E-37 T 14-10-2018 JV59_27755 914c15e927b798eac03e4d1ad01af7b4 128 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 122 3.5E-24 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 JV59_26015 6a8f662a1e11cbb5ef1963a03e1ef759 164 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 3 154 1.7E-53 T 14-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 JV59_26015 6a8f662a1e11cbb5ef1963a03e1ef759 164 Gene3D G3DSA:1.20.120.1370 1 157 2.2E-50 T 14-10-2018 IPR038309 Rsd/AlgQ superfamily JV59_26015 6a8f662a1e11cbb5ef1963a03e1ef759 164 PIRSF PIRSF016548 3 164 7.1E-65 T 14-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 JV59_28940 8dd9a26c24fbfa23984a8e4b2062c2ef 204 Pfam PF00117 Glutamine amidotransferase class-I 8 202 4.3E-18 T 14-10-2018 IPR017926 Glutamine amidotransferase JV59_28940 8dd9a26c24fbfa23984a8e4b2062c2ef 204 PIRSF PIRSF000495 4 204 1.5E-64 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 JV59_28940 8dd9a26c24fbfa23984a8e4b2062c2ef 204 Gene3D G3DSA:3.40.50.880 2 204 2.2E-73 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_28940 8dd9a26c24fbfa23984a8e4b2062c2ef 204 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 6 203 2.0E-68 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 JV59_28940 8dd9a26c24fbfa23984a8e4b2062c2ef 204 SUPERFAMILY SSF52317 5 203 8.56E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_28940 8dd9a26c24fbfa23984a8e4b2062c2ef 204 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 5 204 33.568 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 JV59_22415 4822b4ebe982e8b8148b365680e1a4e7 213 Gene3D G3DSA:2.40.30.130 1 83 3.5E-17 T 14-10-2018 JV59_22415 4822b4ebe982e8b8148b365680e1a4e7 213 Gene3D G3DSA:3.30.980.10 84 212 4.2E-26 T 14-10-2018 JV59_22415 4822b4ebe982e8b8148b365680e1a4e7 213 SUPERFAMILY SSF50447 1 83 5.65E-17 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JV59_22415 4822b4ebe982e8b8148b365680e1a4e7 213 Pfam PF01411 tRNA synthetases class II (A) 12 86 6.9E-10 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 JV59_22415 4822b4ebe982e8b8148b365680e1a4e7 213 SMART SM00863 166 208 2.5E-6 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 JV59_22415 4822b4ebe982e8b8148b365680e1a4e7 213 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 178 208 2.5E-5 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 JV59_22415 4822b4ebe982e8b8148b365680e1a4e7 213 SUPERFAMILY SSF55186 84 209 7.72E-24 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 JV59_38800 ebf3d47057e8f1dc106f14d94bdd64f2 275 Gene3D G3DSA:3.30.540.10 6 159 7.4E-46 T 14-10-2018 JV59_38800 ebf3d47057e8f1dc106f14d94bdd64f2 275 Pfam PF00459 Inositol monophosphatase family 8 253 3.2E-50 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JV59_38800 ebf3d47057e8f1dc106f14d94bdd64f2 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 11 260 5.8E-105 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 JV59_38800 ebf3d47057e8f1dc106f14d94bdd64f2 275 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 10 262 38.977 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 JV59_38800 ebf3d47057e8f1dc106f14d94bdd64f2 275 Gene3D G3DSA:3.40.190.80 160 264 7.2E-26 T 14-10-2018 JV59_38800 ebf3d47057e8f1dc106f14d94bdd64f2 275 SUPERFAMILY SSF56655 6 272 8.25E-76 T 14-10-2018 JV59_38800 ebf3d47057e8f1dc106f14d94bdd64f2 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 1.5E-5 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JV59_38800 ebf3d47057e8f1dc106f14d94bdd64f2 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 1.5E-5 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JV59_38800 ebf3d47057e8f1dc106f14d94bdd64f2 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 1.5E-5 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JV59_34530 bc7c2f170ec39eb9e623df40998d2a90 314 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 312 4.0E-92 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_34530 bc7c2f170ec39eb9e623df40998d2a90 314 Pfam PF01479 S4 domain 20 66 7.6E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_34530 bc7c2f170ec39eb9e623df40998d2a90 314 Pfam PF00849 RNA pseudouridylate synthase 102 247 1.3E-30 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_34530 bc7c2f170ec39eb9e623df40998d2a90 314 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_34530 bc7c2f170ec39eb9e623df40998d2a90 314 Gene3D G3DSA:3.30.2350.10 93 314 5.0E-78 T 14-10-2018 JV59_34530 bc7c2f170ec39eb9e623df40998d2a90 314 SUPERFAMILY SSF55174 19 71 1.06E-8 T 14-10-2018 JV59_34530 bc7c2f170ec39eb9e623df40998d2a90 314 Gene3D G3DSA:3.10.290.10 8 76 2.7E-16 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 JV59_34530 bc7c2f170ec39eb9e623df40998d2a90 314 SMART SM00363 20 77 6.6E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_34530 bc7c2f170ec39eb9e623df40998d2a90 314 SUPERFAMILY SSF55120 91 310 5.28E-63 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_13570 f6fde54cf43d694da124a11e0c6392fe 123 SUPERFAMILY SSF50193 2 122 3.27E-51 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 JV59_13570 f6fde54cf43d694da124a11e0c6392fe 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_13570 f6fde54cf43d694da124a11e0c6392fe 123 Gene3D G3DSA:2.40.150.20 1 123 3.5E-56 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 JV59_13570 f6fde54cf43d694da124a11e0c6392fe 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 1.8E-54 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 JV59_13570 f6fde54cf43d694da124a11e0c6392fe 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.468 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 JV59_13570 f6fde54cf43d694da124a11e0c6392fe 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 1.0E-58 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 JV59_13570 f6fde54cf43d694da124a11e0c6392fe 123 SMART SM01374 1 123 2.0E-85 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 JV59_37215 fe78f902c1ebe619948c5e5e0ca40978 85 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 10 80 1.9E-19 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 JV59_37215 fe78f902c1ebe619948c5e5e0ca40978 85 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 83 7.1E-22 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 JV59_37215 fe78f902c1ebe619948c5e5e0ca40978 85 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 85 35.004 T 14-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 JV59_26290 0873209d5d4db0d61562b3076b902cc6 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 2.7E-125 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 JV59_26290 0873209d5d4db0d61562b3076b902cc6 290 Gene3D G3DSA:3.90.550.10 1 277 2.7E-82 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_26290 0873209d5d4db0d61562b3076b902cc6 290 SUPERFAMILY SSF53448 2 272 2.92E-65 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_26290 0873209d5d4db0d61562b3076b902cc6 290 Pfam PF00483 Nucleotidyl transferase 9 265 8.2E-32 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 JV59_38785 c4b03cb1a09d90743d397596befc200a 707 Gene3D G3DSA:3.10.20.30 382 456 3.0E-29 T 14-10-2018 IPR012675 Beta-grasp domain superfamily JV59_38785 c4b03cb1a09d90743d397596befc200a 707 SUPERFAMILY SSF81271 376 448 1.64E-20 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 JV59_38785 c4b03cb1a09d90743d397596befc200a 707 Gene3D G3DSA:3.30.70.260 628 707 3.0E-14 T 14-10-2018 JV59_38785 c4b03cb1a09d90743d397596befc200a 707 Gene3D G3DSA:1.10.3210.10 3 190 2.9E-79 T 14-10-2018 JV59_38785 c4b03cb1a09d90743d397596befc200a 707 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 704 7.5E-271 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 JV59_38785 c4b03cb1a09d90743d397596befc200a 707 SUPERFAMILY SSF81301 180 393 8.5E-59 T 14-10-2018 JV59_38785 c4b03cb1a09d90743d397596befc200a 707 Pfam PF04607 Region found in RelA / SpoT proteins 235 344 2.1E-34 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 JV59_38785 c4b03cb1a09d90743d397596befc200a 707 Pfam PF13328 HD domain 28 175 2.1E-52 T 14-10-2018 IPR003607 HD/PDEase domain JV59_38785 c4b03cb1a09d90743d397596befc200a 707 Pfam PF13291 ACT domain 628 704 1.3E-14 T 14-10-2018 IPR002912 ACT domain JV59_38785 c4b03cb1a09d90743d397596befc200a 707 Pfam PF02824 TGS domain 389 447 3.8E-19 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 JV59_38785 c4b03cb1a09d90743d397596befc200a 707 SMART SM00954 235 345 1.8E-58 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 JV59_38785 c4b03cb1a09d90743d397596befc200a 707 SUPERFAMILY SSF109604 3 190 7.22E-74 T 14-10-2018 JV59_38785 c4b03cb1a09d90743d397596befc200a 707 SMART SM00471 41 153 5.4E-11 T 14-10-2018 IPR003607 HD/PDEase domain JV59_38785 c4b03cb1a09d90743d397596befc200a 707 SUPERFAMILY SSF55021 632 704 1.11E-8 T 14-10-2018 JV59_38785 c4b03cb1a09d90743d397596befc200a 707 Gene3D G3DSA:3.30.460.10 193 325 5.2E-46 T 14-10-2018 JV59_22980 0b9d1d0374cd772c7addfff443f4b79e 472 Pfam PF03606 C4-dicarboxylate anaerobic carrier 26 466 5.6E-68 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 JV59_28170 3a1928eaf733660edb58d3a1840ab59f 900 Gene3D G3DSA:3.40.605.10 399 455 1.7E-7 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JV59_28170 3a1928eaf733660edb58d3a1840ab59f 900 PIRSF PIRSF000111 1 865 0.0 T 14-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 JV59_28170 3a1928eaf733660edb58d3a1840ab59f 900 Gene3D G3DSA:3.40.309.10 217 398 8.9E-171 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JV59_28170 3a1928eaf733660edb58d3a1840ab59f 900 SUPERFAMILY SSF56796 452 863 8.11E-116 T 14-10-2018 JV59_28170 3a1928eaf733660edb58d3a1840ab59f 900 SUPERFAMILY SSF53720 5 454 2.88E-84 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JV59_28170 3a1928eaf733660edb58d3a1840ab59f 900 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 JV59_28170 3a1928eaf733660edb58d3a1840ab59f 900 Gene3D G3DSA:3.40.50.1970 456 642 4.1E-58 T 14-10-2018 JV59_28170 3a1928eaf733660edb58d3a1840ab59f 900 Pfam PF00171 Aldehyde dehydrogenase family 4 402 1.4E-25 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JV59_28170 3a1928eaf733660edb58d3a1840ab59f 900 Gene3D G3DSA:3.40.605.10 15 216 8.9E-171 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JV59_28170 3a1928eaf733660edb58d3a1840ab59f 900 Gene3D G3DSA:1.20.1090.10 643 864 3.9E-60 T 14-10-2018 JV59_28170 3a1928eaf733660edb58d3a1840ab59f 900 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 848 1.1E-113 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 JV59_28170 3a1928eaf733660edb58d3a1840ab59f 900 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 JV59_26625 f588e88d5f2bff01847445e68c17d752 683 Pfam PF00563 EAL domain 420 655 3.4E-74 T 14-10-2018 IPR001633 EAL domain JV59_26625 f588e88d5f2bff01847445e68c17d752 683 Pfam PF00990 Diguanylate cyclase, GGDEF domain 242 398 9.9E-45 T 14-10-2018 IPR000160 GGDEF domain JV59_26625 f588e88d5f2bff01847445e68c17d752 683 SUPERFAMILY SSF55073 247 404 6.59E-47 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_26625 f588e88d5f2bff01847445e68c17d752 683 SUPERFAMILY SSF141868 418 666 1.7E-89 T 14-10-2018 IPR035919 EAL domain superfamily JV59_26625 f588e88d5f2bff01847445e68c17d752 683 SMART SM00267 231 402 6.6E-60 T 14-10-2018 IPR000160 GGDEF domain JV59_26625 f588e88d5f2bff01847445e68c17d752 683 Gene3D G3DSA:3.20.20.450 415 668 8.1E-98 T 14-10-2018 IPR035919 EAL domain superfamily JV59_26625 f588e88d5f2bff01847445e68c17d752 683 SUPERFAMILY SSF158472 185 229 5.1E-5 T 14-10-2018 JV59_26625 f588e88d5f2bff01847445e68c17d752 683 Gene3D G3DSA:3.30.70.270 239 414 1.5E-57 T 14-10-2018 JV59_26625 f588e88d5f2bff01847445e68c17d752 683 SMART SM00052 412 660 4.1E-112 T 14-10-2018 IPR001633 EAL domain JV59_26625 f588e88d5f2bff01847445e68c17d752 683 Gene3D G3DSA:1.20.1480.50 146 238 5.8E-6 T 14-10-2018 JV59_26625 f588e88d5f2bff01847445e68c17d752 683 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 238 400 3.1E-39 T 14-10-2018 IPR000160 GGDEF domain JV59_36250 bb83ef6832b90a5c3d5d764ebd5711b8 1029 Gene3D G3DSA:2.60.40.10 601 702 1.6E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_36250 bb83ef6832b90a5c3d5d764ebd5711b8 1029 SMART SM01038 728 999 7.7E-123 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 JV59_36250 bb83ef6832b90a5c3d5d764ebd5711b8 1029 Gene3D G3DSA:2.60.40.10 209 319 3.2E-25 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_36250 bb83ef6832b90a5c3d5d764ebd5711b8 1029 Gene3D G3DSA:3.20.20.80 320 600 1.5E-101 T 14-10-2018 JV59_36250 bb83ef6832b90a5c3d5d764ebd5711b8 1029 Gene3D G3DSA:2.70.98.10 733 1004 4.0E-83 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 JV59_36250 bb83ef6832b90a5c3d5d764ebd5711b8 1029 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 436 450 - T 14-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 JV59_36250 bb83ef6832b90a5c3d5d764ebd5711b8 1029 SUPERFAMILY SSF51445 321 599 1.92E-84 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_36250 bb83ef6832b90a5c3d5d764ebd5711b8 1029 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 44 205 8.1E-49 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 JV59_36250 bb83ef6832b90a5c3d5d764ebd5711b8 1029 Pfam PF16353 Domain of unknown function(DUF4981) 616 700 2.0E-13 T 14-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 JV59_36250 bb83ef6832b90a5c3d5d764ebd5711b8 1029 SUPERFAMILY SSF49785 2 206 8.79E-62 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily JV59_36250 bb83ef6832b90a5c3d5d764ebd5711b8 1029 Gene3D G3DSA:2.60.120.260 1 208 1.4E-73 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily JV59_36250 bb83ef6832b90a5c3d5d764ebd5711b8 1029 SUPERFAMILY SSF49303 608 704 7.91E-20 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily JV59_36250 bb83ef6832b90a5c3d5d764ebd5711b8 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 330 344 7.6E-32 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 JV59_36250 bb83ef6832b90a5c3d5d764ebd5711b8 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 436 451 7.6E-32 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 JV59_36250 bb83ef6832b90a5c3d5d764ebd5711b8 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 361 379 7.6E-32 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 JV59_36250 bb83ef6832b90a5c3d5d764ebd5711b8 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 507 522 7.6E-32 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 JV59_36250 bb83ef6832b90a5c3d5d764ebd5711b8 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 135 150 7.6E-32 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 JV59_36250 bb83ef6832b90a5c3d5d764ebd5711b8 1029 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 371 396 - T 14-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 JV59_36250 bb83ef6832b90a5c3d5d764ebd5711b8 1029 Pfam PF00703 Glycosyl hydrolases family 2 209 319 2.0E-17 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 JV59_36250 bb83ef6832b90a5c3d5d764ebd5711b8 1029 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 321 605 2.6E-114 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 JV59_36250 bb83ef6832b90a5c3d5d764ebd5711b8 1029 Pfam PF02929 Beta galactosidase small chain 730 998 1.6E-69 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 JV59_36250 bb83ef6832b90a5c3d5d764ebd5711b8 1029 SUPERFAMILY SSF49303 209 319 2.04E-23 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily JV59_36250 bb83ef6832b90a5c3d5d764ebd5711b8 1029 SUPERFAMILY SSF74650 714 1001 1.99E-86 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 JV59_26785 1b6a36413ef06b10f7267735b7082d29 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 1.4E-109 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 JV59_26785 1b6a36413ef06b10f7267735b7082d29 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.755 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 JV59_26785 1b6a36413ef06b10f7267735b7082d29 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 2.6E-62 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 JV59_26785 1b6a36413ef06b10f7267735b7082d29 210 PIRSF PIRSF006102 3 210 4.3E-73 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 JV59_33860 941889546e036025ed3add820eb14a32 1153 Gene3D G3DSA:3.40.50.300 478 990 9.2E-237 T 14-10-2018 JV59_33860 941889546e036025ed3add820eb14a32 1153 Gene3D G3DSA:3.40.50.11180 26 333 6.8E-119 T 14-10-2018 JV59_33860 941889546e036025ed3add820eb14a32 1153 SUPERFAMILY SSF141259 470 548 9.42E-25 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily JV59_33860 941889546e036025ed3add820eb14a32 1153 SUPERFAMILY SSF52540 782 990 5.88E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_33860 941889546e036025ed3add820eb14a32 1153 SMART SM00490 826 910 3.0E-18 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_33860 941889546e036025ed3add820eb14a32 1153 SMART SM00982 1008 1108 1.8E-46 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 JV59_33860 941889546e036025ed3add820eb14a32 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 30 1109 27.978 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 JV59_33860 941889546e036025ed3add820eb14a32 1153 SMART SM00487 600 790 1.5E-34 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JV59_33860 941889546e036025ed3add820eb14a32 1153 SUPERFAMILY SSF52540 351 467 3.19E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_33860 941889546e036025ed3add820eb14a32 1153 Gene3D G3DSA:3.30.2060.10 130 215 6.8E-119 T 14-10-2018 JV59_33860 941889546e036025ed3add820eb14a32 1153 SUPERFAMILY SSF52540 14 342 2.81E-98 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_33860 941889546e036025ed3add820eb14a32 1153 Gene3D G3DSA:2.30.30.840 483 541 9.2E-237 T 14-10-2018 JV59_33860 941889546e036025ed3add820eb14a32 1153 SUPERFAMILY SSF52540 524 783 1.63E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_33860 941889546e036025ed3add820eb14a32 1153 Gene3D G3DSA:3.40.50.11140 355 453 8.6E-35 T 14-10-2018 JV59_33860 941889546e036025ed3add820eb14a32 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1082 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 JV59_33860 941889546e036025ed3add820eb14a32 1153 Pfam PF02559 CarD-like/TRCF domain 480 575 1.7E-25 T 14-10-2018 IPR003711 CarD-like/TRCF domain JV59_33860 941889546e036025ed3add820eb14a32 1153 Gene3D G3DSA:3.40.50.300 542 781 9.2E-237 T 14-10-2018 JV59_33860 941889546e036025ed3add820eb14a32 1153 SMART SM01058 479 576 1.9E-51 T 14-10-2018 IPR003711 CarD-like/TRCF domain JV59_33860 941889546e036025ed3add820eb14a32 1153 Pfam PF00271 Helicase conserved C-terminal domain 807 909 2.7E-16 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_33860 941889546e036025ed3add820eb14a32 1153 Gene3D G3DSA:3.90.1150.50 1004 1150 2.2E-43 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain JV59_33860 941889546e036025ed3add820eb14a32 1153 SUPERFAMILY SSF143517 994 1146 6.28E-43 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain JV59_33860 941889546e036025ed3add820eb14a32 1153 Pfam PF03461 TRCF domain 1010 1101 3.8E-27 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 JV59_33860 941889546e036025ed3add820eb14a32 1153 Pfam PF00270 DEAD/DEAH box helicase 605 765 1.3E-20 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JV59_32020 2f4368fd268f84ec60ef5abdba17c44e 375 Pfam PF12698 ABC-2 family transporter protein 22 368 2.9E-38 T 14-10-2018 JV59_32050 0363b7d2102abea1f7c2b2fc587a7052 224 SUPERFAMILY SSF81901 31 194 4.45E-20 T 14-10-2018 JV59_32050 0363b7d2102abea1f7c2b2fc587a7052 224 SMART SM00028 31 64 0.0043 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_32050 0363b7d2102abea1f7c2b2fc587a7052 224 SMART SM00028 135 168 1.5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_32050 0363b7d2102abea1f7c2b2fc587a7052 224 SMART SM00028 169 202 170.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_32050 0363b7d2102abea1f7c2b2fc587a7052 224 SMART SM00028 65 98 1.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_32050 0363b7d2102abea1f7c2b2fc587a7052 224 Pfam PF13432 Tetratricopeptide repeat 36 94 0.0022 T 14-10-2018 JV59_32050 0363b7d2102abea1f7c2b2fc587a7052 224 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 5 216 1.0E-64 T 14-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW JV59_32050 0363b7d2102abea1f7c2b2fc587a7052 224 Pfam PF14559 Tetratricopeptide repeat 145 192 1.8E-6 T 14-10-2018 JV59_32050 0363b7d2102abea1f7c2b2fc587a7052 224 Gene3D G3DSA:1.25.40.10 26 221 1.1E-37 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_01760 b25d35814d7be8cc9268d61383f23a01 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site JV59_01760 b25d35814d7be8cc9268d61383f23a01 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.087 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 JV59_01760 b25d35814d7be8cc9268d61383f23a01 529 Gene3D G3DSA:3.40.50.300 110 275 2.1E-114 T 14-10-2018 JV59_01760 b25d35814d7be8cc9268d61383f23a01 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 1.1E-45 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_01760 b25d35814d7be8cc9268d61383f23a01 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 529 5.2E-300 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 JV59_01760 b25d35814d7be8cc9268d61383f23a01 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_01760 b25d35814d7be8cc9268d61383f23a01 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_01760 b25d35814d7be8cc9268d61383f23a01 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_01760 b25d35814d7be8cc9268d61383f23a01 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_01760 b25d35814d7be8cc9268d61383f23a01 529 SUPERFAMILY SSF52540 10 277 4.71E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_01760 b25d35814d7be8cc9268d61383f23a01 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 2.7E-7 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 JV59_01760 b25d35814d7be8cc9268d61383f23a01 529 Gene3D G3DSA:3.40.50.300 72 379 2.1E-114 T 14-10-2018 JV59_01760 b25d35814d7be8cc9268d61383f23a01 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 172 9.1E-20 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JV59_01760 b25d35814d7be8cc9268d61383f23a01 529 SUPERFAMILY SSF54980 393 468 6.47E-17 T 14-10-2018 IPR035647 EF-G domain III/V-like JV59_01760 b25d35814d7be8cc9268d61383f23a01 529 SUPERFAMILY SSF50447 262 393 5.3E-27 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JV59_01760 b25d35814d7be8cc9268d61383f23a01 529 Gene3D G3DSA:3.30.70.3280 390 529 2.2E-52 T 14-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily JV59_01760 b25d35814d7be8cc9268d61383f23a01 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 1.4E-46 T 14-10-2018 IPR032090 Peptide chain release factor 3, C-terminal JV59_29435 105e6f44027de51d233ff754354f7d42 615 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 416 569 2.6E-32 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JV59_29435 105e6f44027de51d233ff754354f7d42 615 Gene3D G3DSA:3.40.50.970 5 204 1.0E-32 T 14-10-2018 JV59_29435 105e6f44027de51d233ff754354f7d42 615 SUPERFAMILY SSF52518 2 211 1.25E-33 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_29435 105e6f44027de51d233ff754354f7d42 615 SUPERFAMILY SSF52518 395 605 6.29E-49 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_29435 105e6f44027de51d233ff754354f7d42 615 Gene3D G3DSA:3.40.50.970 393 581 5.6E-41 T 14-10-2018 JV59_29435 105e6f44027de51d233ff754354f7d42 615 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 8 197 1.8E-41 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 JV59_29435 105e6f44027de51d233ff754354f7d42 615 SUPERFAMILY SSF52467 186 367 2.08E-41 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JV59_29435 105e6f44027de51d233ff754354f7d42 615 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 452 471 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 JV59_29435 105e6f44027de51d233ff754354f7d42 615 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 222 353 5.8E-35 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 JV59_29435 105e6f44027de51d233ff754354f7d42 615 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 6 613 9.3E-296 T 14-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 JV59_29435 105e6f44027de51d233ff754354f7d42 615 Gene3D G3DSA:3.40.50.1220 216 391 2.1E-37 T 14-10-2018 JV59_34225 7e08cad84f7e691fb7e15338eacf3e90 261 SMART SM00346 12 101 1.3E-6 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JV59_34225 7e08cad84f7e691fb7e15338eacf3e90 261 Gene3D G3DSA:1.10.10.10 14 83 1.2E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_34225 7e08cad84f7e691fb7e15338eacf3e90 261 Pfam PF09339 IclR helix-turn-helix domain 16 64 3.7E-11 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JV59_34225 7e08cad84f7e691fb7e15338eacf3e90 261 SUPERFAMILY SSF55781 88 252 9.16E-43 T 14-10-2018 JV59_34225 7e08cad84f7e691fb7e15338eacf3e90 261 SUPERFAMILY SSF46785 16 80 7.26E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_34225 7e08cad84f7e691fb7e15338eacf3e90 261 Gene3D G3DSA:3.30.450.40 85 257 1.3E-46 T 14-10-2018 IPR029016 GAF-like domain superfamily JV59_34225 7e08cad84f7e691fb7e15338eacf3e90 261 Pfam PF01614 Bacterial transcriptional regulator 130 252 6.1E-27 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal JV59_34855 4072b355323a65e502826b243c9300b6 291 Gene3D G3DSA:3.40.190.290 90 290 6.7E-73 T 14-10-2018 JV59_34855 4072b355323a65e502826b243c9300b6 291 SUPERFAMILY SSF46785 1 84 1.32E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_34855 4072b355323a65e502826b243c9300b6 291 Pfam PF03466 LysR substrate binding domain 88 286 3.1E-41 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_34855 4072b355323a65e502826b243c9300b6 291 SUPERFAMILY SSF53850 88 288 5.84E-38 T 14-10-2018 JV59_34855 4072b355323a65e502826b243c9300b6 291 Gene3D G3DSA:1.10.10.10 1 89 9.0E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_34855 4072b355323a65e502826b243c9300b6 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.6E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 Gene3D G3DSA:1.10.287.610 1 71 5.1E-28 T 14-10-2018 JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 665 7.6E-266 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 408 435 1.3E-7 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 Gene3D G3DSA:3.30.470.90 72 318 5.1E-103 T 14-10-2018 JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 332 347 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 323 399 3.2E-35 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 SMART SM00292 595 669 2.7E-10 T 14-10-2018 IPR001357 BRCT domain JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 SUPERFAMILY SSF47781 404 584 1.67E-57 T 14-10-2018 IPR010994 RuvA domain 2-like JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 SMART SM00532 4 449 4.2E-282 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 SUPERFAMILY SSF50249 319 400 1.63E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 Gene3D G3DSA:2.20.70.80 392 432 3.3E-18 T 14-10-2018 JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 Gene3D G3DSA:3.40.50.10190 592 669 3.6E-25 T 14-10-2018 IPR036420 BRCT domain superfamily JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 SUPERFAMILY SSF56091 3 317 2.4E-126 T 14-10-2018 JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 PIRSF PIRSF001604 1 669 1.6E-256 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 Gene3D G3DSA:1.10.150.20 433 505 2.0E-28 T 14-10-2018 JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 SUPERFAMILY SSF52113 592 669 6.98E-19 T 14-10-2018 IPR036420 BRCT domain superfamily JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 Hamap MF_01588 DNA ligase [ligA]. 3 669 54.312 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 669 4.2E-13 T 14-10-2018 IPR001357 BRCT domain JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 Gene3D G3DSA:2.40.50.140 319 391 3.7E-34 T 14-10-2018 JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 Pfam PF12826 Helix-hairpin-helix motif 511 574 8.7E-23 T 14-10-2018 JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 Gene3D G3DSA:1.10.150.20 507 587 1.9E-29 T 14-10-2018 JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 SMART SM00278 545 564 210.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 SMART SM00278 447 466 23.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 SMART SM00278 481 500 110.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 Pfam PF14520 Helix-hairpin-helix domain 447 501 7.8E-6 T 14-10-2018 JV59_02845 942df80f8b4b81219c0eaf10f87d7361 669 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 319 3.9E-135 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 JV59_28610 7dab0254cc440c880f0892a82dc9dab3 100 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 8 98 1.3E-37 T 14-10-2018 IPR011846 Cyd operon protein YbgE JV59_28610 7dab0254cc440c880f0892a82dc9dab3 100 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 20 97 2.3E-29 T 14-10-2018 IPR011846 Cyd operon protein YbgE JV59_22805 9c13ea63e2457cb993c976886cb10dd0 423 SMART SM01119 314 410 2.6E-31 T 14-10-2018 IPR026956 D-serine dehydratase-like domain JV59_22805 9c13ea63e2457cb993c976886cb10dd0 423 Gene3D G3DSA:3.20.20.10 54 284 5.3E-135 T 14-10-2018 IPR029066 PLP-binding barrel JV59_22805 9c13ea63e2457cb993c976886cb10dd0 423 Pfam PF01168 Alanine racemase, N-terminal domain 52 278 1.4E-15 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_22805 9c13ea63e2457cb993c976886cb10dd0 423 SUPERFAMILY SSF51419 52 284 2.88E-30 T 14-10-2018 IPR029066 PLP-binding barrel JV59_22805 9c13ea63e2457cb993c976886cb10dd0 423 Gene3D G3DSA:2.40.37.20 38 423 5.3E-135 T 14-10-2018 JV59_22805 9c13ea63e2457cb993c976886cb10dd0 423 Pfam PF14031 Putative serine dehydratase domain 314 408 1.7E-14 T 14-10-2018 IPR026956 D-serine dehydratase-like domain JV59_32185 e9f71df1562e86ddfb415a2dd19ae23d 97 Pfam PF12802 MarR family 33 82 4.5E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_32185 e9f71df1562e86ddfb415a2dd19ae23d 97 Gene3D G3DSA:1.10.10.10 10 84 1.4E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_32185 e9f71df1562e86ddfb415a2dd19ae23d 97 SUPERFAMILY SSF46785 29 86 1.59E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 Gene3D G3DSA:3.40.1110.10 592 711 3.1E-92 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 SUPERFAMILY SSF55008 150 226 4.71E-18 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 158 221 7.1E-13 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 726 736 1.7E-26 T 14-10-2018 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 704 715 1.7E-26 T 14-10-2018 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 802 814 1.7E-26 T 14-10-2018 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 779 798 1.7E-26 T 14-10-2018 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 429 443 1.7E-26 T 14-10-2018 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 581 595 1.7E-26 T 14-10-2018 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 312 888 2.7E-182 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 293 889 6.4E-184 T 14-10-2018 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 SUPERFAMILY SSF56784 579 885 1.92E-55 T 14-10-2018 IPR036412 HAD-like superfamily JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 Pfam PF00702 haloacid dehalogenase-like hydrolase 577 793 3.3E-40 T 14-10-2018 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 351 857 2.3E-83 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 SUPERFAMILY SSF81653 382 479 3.14E-23 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 SUPERFAMILY SSF81665 328 837 4.84E-9 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 Pfam PF00122 E1-E2 ATPase 380 560 2.5E-48 T 14-10-2018 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 Gene3D G3DSA:3.30.70.100 143 230 2.2E-20 T 14-10-2018 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 PRINTS PR00943 Copper-transporting ATPase signature 170 184 3.7E-12 T 14-10-2018 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 PRINTS PR00943 Copper-transporting ATPase signature 756 773 3.7E-12 T 14-10-2018 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 PRINTS PR00943 Copper-transporting ATPase signature 502 516 3.7E-12 T 14-10-2018 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 PRINTS PR00943 Copper-transporting ATPase signature 297 316 3.7E-12 T 14-10-2018 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 PRINTS PR00943 Copper-transporting ATPase signature 564 579 3.7E-12 T 14-10-2018 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 PRINTS PR00943 Copper-transporting ATPase signature 200 220 3.7E-12 T 14-10-2018 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 PRINTS PR00943 Copper-transporting ATPase signature 369 387 3.7E-12 T 14-10-2018 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 Gene3D G3DSA:3.40.50.1000 562 831 3.1E-92 T 14-10-2018 IPR023214 HAD superfamily JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 SUPERFAMILY SSF55008 65 126 1.1E-7 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 SUPERFAMILY SSF55008 3 62 1.57E-5 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 Gene3D G3DSA:2.70.150.20 367 483 1.9E-35 T 14-10-2018 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 583 589 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 ProSitePatterns PS01047 Heavy-metal-associated domain. 160 189 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 Pfam PF00403 Heavy-metal-associated domain 158 219 2.7E-14 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 ProSitePatterns PS01229 Hypothetical cof family signature 2. 779 801 - T 14-10-2018 JV59_02960 9fe900dd36a04664dbf7a1e792ecef38 897 Gene3D G3DSA:3.30.70.100 66 126 5.2E-6 T 14-10-2018 JV59_20890 dc194c01c109df92da11a2c0bdc2a067 710 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 95 166 1.2E-10 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JV59_20890 dc194c01c109df92da11a2c0bdc2a067 710 SUPERFAMILY SSF51998 171 694 7.02E-184 T 14-10-2018 JV59_20890 dc194c01c109df92da11a2c0bdc2a067 710 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 99 693 7.3E-168 T 14-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JV59_20890 dc194c01c109df92da11a2c0bdc2a067 710 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 11 710 0.0 T 14-10-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JV59_20890 dc194c01c109df92da11a2c0bdc2a067 710 Pfam PF08343 Ribonucleotide reductase N-terminal 12 93 4.9E-31 T 14-10-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JV59_20890 dc194c01c109df92da11a2c0bdc2a067 710 Gene3D G3DSA:1.10.1650.20 290 341 1.5E-26 T 14-10-2018 JV59_20890 dc194c01c109df92da11a2c0bdc2a067 710 PRINTS PR01183 Ribonucleotide reductase large chain signature 489 512 4.7E-34 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JV59_20890 dc194c01c109df92da11a2c0bdc2a067 710 PRINTS PR01183 Ribonucleotide reductase large chain signature 461 483 4.7E-34 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JV59_20890 dc194c01c109df92da11a2c0bdc2a067 710 PRINTS PR01183 Ribonucleotide reductase large chain signature 247 266 4.7E-34 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JV59_20890 dc194c01c109df92da11a2c0bdc2a067 710 PRINTS PR01183 Ribonucleotide reductase large chain signature 573 600 4.7E-34 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JV59_20890 dc194c01c109df92da11a2c0bdc2a067 710 PRINTS PR01183 Ribonucleotide reductase large chain signature 378 389 4.7E-34 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JV59_20890 dc194c01c109df92da11a2c0bdc2a067 710 PRINTS PR01183 Ribonucleotide reductase large chain signature 422 445 4.7E-34 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JV59_20890 dc194c01c109df92da11a2c0bdc2a067 710 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 562 584 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JV59_20890 dc194c01c109df92da11a2c0bdc2a067 710 Pfam PF02867 Ribonucleotide reductase, barrel domain 173 689 3.3E-141 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JV59_20890 dc194c01c109df92da11a2c0bdc2a067 710 SUPERFAMILY SSF48168 11 170 1.57E-55 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JV59_16260 0b3649dca110da381f2fe7ba9e019d57 282 Pfam PF02678 Pirin 26 121 2.2E-33 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 JV59_16260 0b3649dca110da381f2fe7ba9e019d57 282 SUPERFAMILY SSF51182 5 280 4.22E-72 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JV59_16260 0b3649dca110da381f2fe7ba9e019d57 282 Pfam PF05726 Pirin C-terminal cupin domain 182 279 4.2E-28 T 14-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 JV59_16260 0b3649dca110da381f2fe7ba9e019d57 282 PIRSF PIRSF006232 3 282 4.9E-83 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 JV59_16260 0b3649dca110da381f2fe7ba9e019d57 282 Gene3D G3DSA:2.60.120.10 143 249 1.7E-84 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_16260 0b3649dca110da381f2fe7ba9e019d57 282 Gene3D G3DSA:2.60.120.10 18 275 1.7E-84 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_25430 fd4cfa1e296d9646c72adb3885f2985d 700 SUPERFAMILY SSF51445 289 614 1.01E-100 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_25430 fd4cfa1e296d9646c72adb3885f2985d 700 Gene3D G3DSA:3.20.20.70 274 589 1.5E-117 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_25430 fd4cfa1e296d9646c72adb3885f2985d 700 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 22 244 4.1E-47 T 14-10-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JV59_25430 fd4cfa1e296d9646c72adb3885f2985d 700 Gene3D G3DSA:2.70.98.60 2 273 4.1E-54 T 14-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JV59_25430 fd4cfa1e296d9646c72adb3885f2985d 700 Pfam PF02065 Melibiase 253 591 2.8E-118 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JV59_25430 fd4cfa1e296d9646c72adb3885f2985d 700 ProSitePatterns PS00512 Alpha-galactosidase signature. 322 341 - T 14-10-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JV59_25430 fd4cfa1e296d9646c72adb3885f2985d 700 PIRSF PIRSF005536 1 700 4.4E-223 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JV59_25430 fd4cfa1e296d9646c72adb3885f2985d 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 205 220 7.1E-54 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JV59_25430 fd4cfa1e296d9646c72adb3885f2985d 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 256 276 7.1E-54 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JV59_25430 fd4cfa1e296d9646c72adb3885f2985d 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 502 518 7.1E-54 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JV59_25430 fd4cfa1e296d9646c72adb3885f2985d 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 321 336 7.1E-54 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JV59_25430 fd4cfa1e296d9646c72adb3885f2985d 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 477 493 7.1E-54 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JV59_25430 fd4cfa1e296d9646c72adb3885f2985d 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 293 307 7.1E-54 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JV59_25430 fd4cfa1e296d9646c72adb3885f2985d 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 371 393 7.1E-54 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JV59_25430 fd4cfa1e296d9646c72adb3885f2985d 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 429 444 7.1E-54 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JV59_21565 f68d8fec6ae0457423507692c2382cd4 332 SUPERFAMILY SSF53187 40 330 2.88E-47 T 14-10-2018 JV59_21565 f68d8fec6ae0457423507692c2382cd4 332 Gene3D G3DSA:3.40.630.10 11 330 8.4E-72 T 14-10-2018 JV59_21565 f68d8fec6ae0457423507692c2382cd4 332 PIRSF PIRSF039012 12 332 6.0E-87 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 JV59_21565 f68d8fec6ae0457423507692c2382cd4 332 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 56 329 8.5E-65 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 JV59_20240 828cfaa0b54cfb4dd40a8582fbf093ac 958 SUPERFAMILY SSF109604 577 684 4.08E-8 T 14-10-2018 JV59_20240 828cfaa0b54cfb4dd40a8582fbf093ac 958 Pfam PF02743 Cache domain 67 291 9.3E-12 T 14-10-2018 IPR033479 Double Cache domain 1 JV59_20240 828cfaa0b54cfb4dd40a8582fbf093ac 958 Gene3D G3DSA:1.10.3210.10 802 931 1.2E-29 T 14-10-2018 JV59_20240 828cfaa0b54cfb4dd40a8582fbf093ac 958 Gene3D G3DSA:1.10.3210.10 561 671 1.7E-19 T 14-10-2018 JV59_20240 828cfaa0b54cfb4dd40a8582fbf093ac 958 SUPERFAMILY SSF109604 810 921 1.48E-9 T 14-10-2018 JV59_20240 828cfaa0b54cfb4dd40a8582fbf093ac 958 Gene3D G3DSA:3.30.450.20 223 303 6.2E-13 T 14-10-2018 JV59_20240 828cfaa0b54cfb4dd40a8582fbf093ac 958 SUPERFAMILY SSF55781 422 566 4.37E-6 T 14-10-2018 JV59_20240 828cfaa0b54cfb4dd40a8582fbf093ac 958 SUPERFAMILY SSF103190 167 233 7.85E-7 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JV59_20240 828cfaa0b54cfb4dd40a8582fbf093ac 958 Gene3D G3DSA:3.30.450.20 165 222 6.2E-13 T 14-10-2018 JV59_20240 828cfaa0b54cfb4dd40a8582fbf093ac 958 SMART SM00471 582 891 5.2E-5 T 14-10-2018 IPR003607 HD/PDEase domain JV59_20240 828cfaa0b54cfb4dd40a8582fbf093ac 958 Gene3D G3DSA:3.30.450.40 400 558 3.8E-8 T 14-10-2018 IPR029016 GAF-like domain superfamily JV59_20240 828cfaa0b54cfb4dd40a8582fbf093ac 958 Pfam PF13487 HD domain 808 873 3.6E-23 T 14-10-2018 JV59_35745 a3862eea3e5b473787e864e85815c0fd 554 SUPERFAMILY SSF52540 4 504 4.07E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_35745 a3862eea3e5b473787e864e85815c0fd 554 Gene3D G3DSA:3.40.50.300 1 226 1.4E-42 T 14-10-2018 JV59_35745 a3862eea3e5b473787e864e85815c0fd 554 Gene3D G3DSA:3.40.50.300 241 553 7.6E-51 T 14-10-2018 JV59_35745 a3862eea3e5b473787e864e85815c0fd 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 507 8.8E-17 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal JV59_35745 a3862eea3e5b473787e864e85815c0fd 554 PIRSF PIRSF003128 1 554 2.6E-162 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 JV59_35745 a3862eea3e5b473787e864e85815c0fd 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 9.0E-172 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 JV59_35745 a3862eea3e5b473787e864e85815c0fd 554 SUPERFAMILY SSF52540 1 217 1.5E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_19790 ccb6415bffa289e09ccf06fead87f8c2 462 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 243 7.8E-25 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_19790 ccb6415bffa289e09ccf06fead87f8c2 462 SUPERFAMILY SSF55073 300 445 1.41E-35 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_19790 ccb6415bffa289e09ccf06fead87f8c2 462 SMART SM00062 25 247 1.1E-4 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_19790 ccb6415bffa289e09ccf06fead87f8c2 462 Pfam PF00990 Diguanylate cyclase, GGDEF domain 296 441 2.7E-32 T 14-10-2018 IPR000160 GGDEF domain JV59_19790 ccb6415bffa289e09ccf06fead87f8c2 462 Gene3D G3DSA:3.40.190.10 22 243 5.0E-36 T 14-10-2018 JV59_19790 ccb6415bffa289e09ccf06fead87f8c2 462 SMART SM00267 284 446 1.0E-42 T 14-10-2018 IPR000160 GGDEF domain JV59_19790 ccb6415bffa289e09ccf06fead87f8c2 462 Gene3D G3DSA:3.40.190.10 110 206 5.0E-36 T 14-10-2018 JV59_19790 ccb6415bffa289e09ccf06fead87f8c2 462 SUPERFAMILY SSF53850 26 245 5.92E-33 T 14-10-2018 JV59_19790 ccb6415bffa289e09ccf06fead87f8c2 462 Gene3D G3DSA:3.30.70.270 280 447 5.1E-42 T 14-10-2018 JV59_19790 ccb6415bffa289e09ccf06fead87f8c2 462 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 293 445 3.7E-34 T 14-10-2018 IPR000160 GGDEF domain JV59_38110 6ae211384e3ad51a43360ed6cdf45c6f 154 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 4.0E-39 T 14-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal JV59_38110 6ae211384e3ad51a43360ed6cdf45c6f 154 Gene3D G3DSA:2.30.30.20 101 153 1.2E-23 T 14-10-2018 JV59_38110 6ae211384e3ad51a43360ed6cdf45c6f 154 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 4.2E-60 T 14-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 JV59_38110 6ae211384e3ad51a43360ed6cdf45c6f 154 Gene3D G3DSA:3.30.70.140 1 100 9.6E-36 T 14-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily JV59_38110 6ae211384e3ad51a43360ed6cdf45c6f 154 SUPERFAMILY SSF54893 2 100 1.83E-35 T 14-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily JV59_38110 6ae211384e3ad51a43360ed6cdf45c6f 154 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 103 149 2.2E-18 T 14-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal JV59_38110 6ae211384e3ad51a43360ed6cdf45c6f 154 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 32.847 T 14-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 JV59_38110 6ae211384e3ad51a43360ed6cdf45c6f 154 SUPERFAMILY SSF57825 101 151 2.88E-15 T 14-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily JV59_38110 6ae211384e3ad51a43360ed6cdf45c6f 154 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 2.2E-30 T 14-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal JV59_25685 109e319a8618fed7ddfdaabc62ce647c 545 SUPERFAMILY SSF103473 1 385 3.4E-51 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_25685 109e319a8618fed7ddfdaabc62ce647c 545 Pfam PF00582 Universal stress protein family 403 539 2.0E-8 T 14-10-2018 IPR006016 UspA JV59_25685 109e319a8618fed7ddfdaabc62ce647c 545 Gene3D G3DSA:3.40.50.620 396 538 2.1E-13 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_25685 109e319a8618fed7ddfdaabc62ce647c 545 Pfam PF07690 Major Facilitator Superfamily 15 348 1.1E-32 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_25685 109e319a8618fed7ddfdaabc62ce647c 545 Gene3D G3DSA:1.20.1250.20 3 383 3.8E-51 T 14-10-2018 JV59_25685 109e319a8618fed7ddfdaabc62ce647c 545 PRINTS PR01035 Tetracycline resistance protein signature 162 182 1.2E-8 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 JV59_25685 109e319a8618fed7ddfdaabc62ce647c 545 PRINTS PR01035 Tetracycline resistance protein signature 20 36 1.2E-8 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 JV59_25685 109e319a8618fed7ddfdaabc62ce647c 545 PRINTS PR01035 Tetracycline resistance protein signature 134 156 1.2E-8 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 JV59_25685 109e319a8618fed7ddfdaabc62ce647c 545 SUPERFAMILY SSF52402 404 540 3.6E-15 T 14-10-2018 JV59_21555 0c2232b9a097b0272207ba7313a9a251 329 Gene3D G3DSA:3.40.630.10 12 328 6.9E-68 T 14-10-2018 JV59_21555 0c2232b9a097b0272207ba7313a9a251 329 PIRSF PIRSF039012 9 329 7.7E-86 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 JV59_21555 0c2232b9a097b0272207ba7313a9a251 329 SUPERFAMILY SSF53187 27 328 6.62E-51 T 14-10-2018 JV59_21555 0c2232b9a097b0272207ba7313a9a251 329 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 54 326 3.2E-62 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 JV59_34255 1dbb7eb57d9f8cef41ed2a619062b28f 656 Gene3D G3DSA:3.30.70.270 486 641 1.0E-33 T 14-10-2018 JV59_34255 1dbb7eb57d9f8cef41ed2a619062b28f 656 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 24 187 6.8E-20 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_34255 1dbb7eb57d9f8cef41ed2a619062b28f 656 SUPERFAMILY SSF55073 497 640 2.75E-28 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_34255 1dbb7eb57d9f8cef41ed2a619062b28f 656 SMART SM00062 229 454 4.1E-5 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_34255 1dbb7eb57d9f8cef41ed2a619062b28f 656 SMART SM00062 9 210 1.1E-10 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_34255 1dbb7eb57d9f8cef41ed2a619062b28f 656 SMART SM00267 481 641 4.2E-25 T 14-10-2018 IPR000160 GGDEF domain JV59_34255 1dbb7eb57d9f8cef41ed2a619062b28f 656 SUPERFAMILY SSF53850 24 201 3.42E-22 T 14-10-2018 JV59_34255 1dbb7eb57d9f8cef41ed2a619062b28f 656 Gene3D G3DSA:3.40.190.10 19 94 2.1E-10 T 14-10-2018 JV59_34255 1dbb7eb57d9f8cef41ed2a619062b28f 656 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 488 636 4.7E-30 T 14-10-2018 IPR000160 GGDEF domain JV59_34255 1dbb7eb57d9f8cef41ed2a619062b28f 656 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 242 439 2.5E-21 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_34255 1dbb7eb57d9f8cef41ed2a619062b28f 656 SUPERFAMILY SSF53850 243 450 4.83E-27 T 14-10-2018 JV59_34255 1dbb7eb57d9f8cef41ed2a619062b28f 656 Gene3D G3DSA:3.40.190.10 239 445 4.2E-25 T 14-10-2018 JV59_34255 1dbb7eb57d9f8cef41ed2a619062b28f 656 Gene3D G3DSA:3.40.190.10 95 162 4.2E-7 T 14-10-2018 JV59_34255 1dbb7eb57d9f8cef41ed2a619062b28f 656 Gene3D G3DSA:3.40.190.10 316 414 4.2E-25 T 14-10-2018 JV59_34255 1dbb7eb57d9f8cef41ed2a619062b28f 656 Pfam PF00990 Diguanylate cyclase, GGDEF domain 493 636 4.0E-27 T 14-10-2018 IPR000160 GGDEF domain JV59_22715 b845ccbf616ce00d386e569fb8014c3b 705 Pfam PF00182 Chitinase class I 588 650 2.9E-7 T 14-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 JV59_22715 b845ccbf616ce00d386e569fb8014c3b 705 SUPERFAMILY SSF53955 531 701 2.17E-33 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily JV59_22715 b845ccbf616ce00d386e569fb8014c3b 705 Gene3D G3DSA:1.10.530.70 528 704 6.1E-20 T 14-10-2018 JV59_38325 8df890e5c89a438d1ccac49e5b580016 127 Gene3D G3DSA:1.20.1300.10 1 127 1.7E-47 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_38325 8df890e5c89a438d1ccac49e5b580016 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 3.0E-49 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 JV59_38325 8df890e5c89a438d1ccac49e5b580016 127 Pfam PF02300 Fumarate reductase subunit C 2 127 3.3E-49 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 JV59_38325 8df890e5c89a438d1ccac49e5b580016 127 SUPERFAMILY SSF81343 1 127 1.37E-52 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_38325 8df890e5c89a438d1ccac49e5b580016 127 PIRSF PIRSF000180 1 127 5.7E-58 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 JV59_38325 8df890e5c89a438d1ccac49e5b580016 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 27.083 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 JV59_01780 98a58d88bbd661e3fecb78855f20e186 299 SMART SM00937 19 129 1.1E-55 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 JV59_01780 98a58d88bbd661e3fecb78855f20e186 299 Gene3D G3DSA:3.30.160.20 160 255 5.8E-96 T 14-10-2018 JV59_01780 98a58d88bbd661e3fecb78855f20e186 299 Pfam PF03462 PCRF domain 1 153 1.3E-49 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 JV59_01780 98a58d88bbd661e3fecb78855f20e186 299 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 297 3.8E-151 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 JV59_01780 98a58d88bbd661e3fecb78855f20e186 299 Gene3D G3DSA:3.30.70.1660 64 292 5.8E-96 T 14-10-2018 JV59_01780 98a58d88bbd661e3fecb78855f20e186 299 SUPERFAMILY SSF75620 1 298 3.66E-125 T 14-10-2018 JV59_01780 98a58d88bbd661e3fecb78855f20e186 299 Gene3D G3DSA:1.20.58.410 1 50 9.7E-12 T 14-10-2018 JV59_01780 98a58d88bbd661e3fecb78855f20e186 299 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 3 299 32.392 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 JV59_01780 98a58d88bbd661e3fecb78855f20e186 299 Pfam PF00472 RF-1 domain 162 271 1.7E-40 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 JV59_01780 98a58d88bbd661e3fecb78855f20e186 299 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 179 195 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 JV59_23295 e06c194508006d54d0b00528cab15472 294 Gene3D G3DSA:1.10.3720.10 52 292 1.6E-71 T 14-10-2018 IPR035906 MetI-like superfamily JV59_23295 e06c194508006d54d0b00528cab15472 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 291 4.9E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_23295 e06c194508006d54d0b00528cab15472 294 SUPERFAMILY SSF161098 56 281 2.35E-62 T 14-10-2018 IPR035906 MetI-like superfamily JV59_25855 263d9371e3f4434d4c9259e3e690714d 237 SUPERFAMILY SSF46894 132 231 1.3E-27 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_25855 263d9371e3f4434d4c9259e3e690714d 237 SMART SM00862 154 230 8.0E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_25855 263d9371e3f4434d4c9259e3e690714d 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 2.0E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_25855 263d9371e3f4434d4c9259e3e690714d 237 SMART SM00448 7 117 2.2E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_25855 263d9371e3f4434d4c9259e3e690714d 237 Gene3D G3DSA:1.10.10.10 132 236 2.9E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_25855 263d9371e3f4434d4c9259e3e690714d 237 Pfam PF00072 Response regulator receiver domain 9 117 7.6E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_25855 263d9371e3f4434d4c9259e3e690714d 237 Gene3D G3DSA:3.40.50.2300 2 131 9.9E-34 T 14-10-2018 JV59_25855 263d9371e3f4434d4c9259e3e690714d 237 SUPERFAMILY SSF52172 4 127 5.12E-37 T 14-10-2018 IPR011006 CheY-like superfamily JV59_35230 d56520a23e836f92c029d0e73f42c184 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 103 16.509 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JV59_35230 d56520a23e836f92c029d0e73f42c184 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 5.7E-12 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JV59_35230 d56520a23e836f92c029d0e73f42c184 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 5.7E-12 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JV59_35230 d56520a23e836f92c029d0e73f42c184 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 5.7E-12 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JV59_35230 d56520a23e836f92c029d0e73f42c184 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 18 102 7.6E-19 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JV59_35230 d56520a23e836f92c029d0e73f42c184 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 103 1.9E-29 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JV59_18920 2c81d34b40467abc65e9edf2e8c4c94d 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 54 2.2E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_18920 2c81d34b40467abc65e9edf2e8c4c94d 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 24 38 2.2E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_18920 2c81d34b40467abc65e9edf2e8c4c94d 237 SMART SM00345 7 64 7.8E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_18920 2c81d34b40467abc65e9edf2e8c4c94d 237 Gene3D G3DSA:3.40.1410.10 76 224 4.1E-20 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JV59_18920 2c81d34b40467abc65e9edf2e8c4c94d 237 SUPERFAMILY SSF46785 2 66 2.06E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_18920 2c81d34b40467abc65e9edf2e8c4c94d 237 SMART SM00866 82 219 3.4E-5 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 JV59_18920 2c81d34b40467abc65e9edf2e8c4c94d 237 SUPERFAMILY SSF64288 88 224 1.73E-26 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JV59_18920 2c81d34b40467abc65e9edf2e8c4c94d 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 64 1.0E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_18920 2c81d34b40467abc65e9edf2e8c4c94d 237 Pfam PF07702 UTRA domain 87 208 4.5E-17 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 JV59_18920 2c81d34b40467abc65e9edf2e8c4c94d 237 Gene3D G3DSA:1.10.10.10 1 64 2.7E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_36940 07dab207f6a48aab252b5c0ea5e8a4cc 324 Gene3D G3DSA:3.30.300.20 208 322 1.7E-42 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JV59_36940 07dab207f6a48aab252b5c0ea5e8a4cc 324 Pfam PF07650 KH domain 231 308 4.4E-21 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_36940 07dab207f6a48aab252b5c0ea5e8a4cc 324 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 30 192 1.4E-38 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JV59_36940 07dab207f6a48aab252b5c0ea5e8a4cc 324 SUPERFAMILY SSF54814 204 320 2.81E-41 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 JV59_36940 07dab207f6a48aab252b5c0ea5e8a4cc 324 Gene3D G3DSA:3.40.50.300 24 206 9.8E-52 T 14-10-2018 JV59_36940 07dab207f6a48aab252b5c0ea5e8a4cc 324 TIGRFAM TIGR00436 era: GTP-binding protein Era 31 303 5.2E-110 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_36940 07dab207f6a48aab252b5c0ea5e8a4cc 324 Hamap MF_00367 GTPase Era [era]. 28 320 35.733 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_36940 07dab207f6a48aab252b5c0ea5e8a4cc 324 Pfam PF01926 50S ribosome-binding GTPase 33 147 1.2E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JV59_36940 07dab207f6a48aab252b5c0ea5e8a4cc 324 SUPERFAMILY SSF52540 33 228 2.63E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_34840 c39abacb2c9d22e89cab4e8c9e402181 130 PIRSF PIRSF016789 4 125 1.2E-43 T 14-10-2018 IPR007401 Protein of unknown function DUF454 JV59_34840 c39abacb2c9d22e89cab4e8c9e402181 130 Pfam PF04304 Protein of unknown function (DUF454) 8 118 5.0E-39 T 14-10-2018 IPR007401 Protein of unknown function DUF454 JV59_19475 901f284141224e3ee9721ea58aa5ffa8 545 Pfam PF01266 FAD dependent oxidoreductase 8 357 8.9E-51 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JV59_19475 901f284141224e3ee9721ea58aa5ffa8 545 Gene3D G3DSA:3.30.9.10 84 316 5.8E-78 T 14-10-2018 JV59_19475 901f284141224e3ee9721ea58aa5ffa8 545 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 309 315 2.1E-20 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JV59_19475 901f284141224e3ee9721ea58aa5ffa8 545 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 345 357 2.1E-20 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JV59_19475 901f284141224e3ee9721ea58aa5ffa8 545 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 20 30 2.1E-20 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JV59_19475 901f284141224e3ee9721ea58aa5ffa8 545 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 36 48 2.1E-20 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JV59_19475 901f284141224e3ee9721ea58aa5ffa8 545 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 7 19 2.1E-20 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JV59_19475 901f284141224e3ee9721ea58aa5ffa8 545 SUPERFAMILY SSF51905 7 370 8.17E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_19475 901f284141224e3ee9721ea58aa5ffa8 545 Pfam PF04324 BFD-like [2Fe-2S] binding domain 429 480 1.4E-11 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain JV59_19475 901f284141224e3ee9721ea58aa5ffa8 545 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 8 533 2.9E-258 T 14-10-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 JV59_19475 901f284141224e3ee9721ea58aa5ffa8 545 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 350 360 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JV59_19475 901f284141224e3ee9721ea58aa5ffa8 545 Gene3D G3DSA:3.50.50.60 8 364 5.8E-78 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_19475 901f284141224e3ee9721ea58aa5ffa8 545 Gene3D G3DSA:1.10.10.1100 417 491 3.3E-20 T 14-10-2018 JV59_19475 901f284141224e3ee9721ea58aa5ffa8 545 SUPERFAMILY SSF54373 224 315 5.89E-12 T 14-10-2018 JV59_17585 cfb560518f772207f5619f65f0a5aadc 132 Pfam PF02566 OsmC-like protein 29 127 3.0E-17 T 14-10-2018 IPR003718 OsmC/Ohr family JV59_17585 cfb560518f772207f5619f65f0a5aadc 132 Gene3D G3DSA:3.30.300.20 35 132 2.9E-24 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JV59_17585 cfb560518f772207f5619f65f0a5aadc 132 Gene3D G3DSA:2.20.25.10 1 34 7.8E-20 T 14-10-2018 JV59_17585 cfb560518f772207f5619f65f0a5aadc 132 SUPERFAMILY SSF82784 1 131 8.38E-39 T 14-10-2018 IPR036102 OsmC/Ohr superfamily JV59_33545 167adfdfb27255fe9b6a6505638a1c89 296 Gene3D G3DSA:3.40.190.10 92 286 2.2E-58 T 14-10-2018 JV59_33545 167adfdfb27255fe9b6a6505638a1c89 296 SUPERFAMILY SSF53850 89 292 1.71E-43 T 14-10-2018 JV59_33545 167adfdfb27255fe9b6a6505638a1c89 296 SUPERFAMILY SSF46785 4 88 1.52E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_33545 167adfdfb27255fe9b6a6505638a1c89 296 Gene3D G3DSA:1.10.10.10 3 91 6.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_33545 167adfdfb27255fe9b6a6505638a1c89 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.4E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_33545 167adfdfb27255fe9b6a6505638a1c89 296 Gene3D G3DSA:3.40.190.10 163 262 2.2E-58 T 14-10-2018 JV59_33545 167adfdfb27255fe9b6a6505638a1c89 296 Pfam PF03466 LysR substrate binding domain 89 290 7.8E-42 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_17660 fa91ec99b4be5fe464074443f7bbddb6 306 Pfam PF00892 EamA-like transporter family 156 286 1.3E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_17660 fa91ec99b4be5fe464074443f7bbddb6 306 Pfam PF00892 EamA-like transporter family 9 139 6.1E-23 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_17660 fa91ec99b4be5fe464074443f7bbddb6 306 SUPERFAMILY SSF103481 40 141 2.88E-11 T 14-10-2018 JV59_17660 fa91ec99b4be5fe464074443f7bbddb6 306 SUPERFAMILY SSF103481 188 289 2.48E-6 T 14-10-2018 JV59_01380 0b3fc14db60c3c5c3628dc7a2766d547 463 SUPERFAMILY SSF47446 329 430 3.6E-38 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 JV59_01380 0b3fc14db60c3c5c3628dc7a2766d547 463 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 453 34.144 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 JV59_01380 0b3fc14db60c3c5c3628dc7a2766d547 463 Gene3D G3DSA:1.20.120.140 4 305 6.3E-122 T 14-10-2018 JV59_01380 0b3fc14db60c3c5c3628dc7a2766d547 463 Gene3D G3DSA:1.10.260.30 328 454 4.1E-45 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 JV59_01380 0b3fc14db60c3c5c3628dc7a2766d547 463 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 6.3E-178 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 JV59_01380 0b3fc14db60c3c5c3628dc7a2766d547 463 Pfam PF02978 Signal peptide binding domain 329 427 1.2E-33 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 JV59_01380 0b3fc14db60c3c5c3628dc7a2766d547 463 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 6.8E-74 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JV59_01380 0b3fc14db60c3c5c3628dc7a2766d547 463 SMART SM00962 100 296 6.6E-115 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JV59_01380 0b3fc14db60c3c5c3628dc7a2766d547 463 SMART SM00382 99 247 2.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_01380 0b3fc14db60c3c5c3628dc7a2766d547 463 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.6E-21 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JV59_01380 0b3fc14db60c3c5c3628dc7a2766d547 463 SUPERFAMILY SSF52540 42 353 9.03E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_01380 0b3fc14db60c3c5c3628dc7a2766d547 463 Gene3D G3DSA:3.40.50.300 90 285 6.3E-122 T 14-10-2018 JV59_01380 0b3fc14db60c3c5c3628dc7a2766d547 463 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JV59_01380 0b3fc14db60c3c5c3628dc7a2766d547 463 SMART SM00963 1 86 3.4E-36 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JV59_01100 a365a4a86784227029f62bb19b9228d8 628 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 353 463 1.8E-8 T 14-10-2018 IPR000014 PAS domain JV59_01100 a365a4a86784227029f62bb19b9228d8 628 Gene3D G3DSA:3.30.450.20 208 303 9.9E-38 T 14-10-2018 JV59_01100 a365a4a86784227029f62bb19b9228d8 628 Gene3D G3DSA:3.30.450.20 348 463 1.0E-13 T 14-10-2018 JV59_01100 a365a4a86784227029f62bb19b9228d8 628 SUPERFAMILY SSF55785 353 464 8.9E-12 T 14-10-2018 IPR035965 PAS domain superfamily JV59_01100 a365a4a86784227029f62bb19b9228d8 628 SUPERFAMILY SSF55073 472 621 5.65E-36 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_01100 a365a4a86784227029f62bb19b9228d8 628 Pfam PF00989 PAS fold 353 432 5.9E-5 T 14-10-2018 IPR013767 PAS fold GO:0006355 JV59_01100 a365a4a86784227029f62bb19b9228d8 628 SMART SM00267 456 621 1.3E-42 T 14-10-2018 IPR000160 GGDEF domain JV59_01100 a365a4a86784227029f62bb19b9228d8 628 SUPERFAMILY SSF103190 208 298 4.71E-26 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JV59_01100 a365a4a86784227029f62bb19b9228d8 628 SUPERFAMILY SSF103190 38 207 5.34E-50 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JV59_01100 a365a4a86784227029f62bb19b9228d8 628 Gene3D G3DSA:3.30.70.270 464 625 6.2E-43 T 14-10-2018 JV59_01100 a365a4a86784227029f62bb19b9228d8 628 Gene3D G3DSA:3.30.450.20 74 207 9.2E-43 T 14-10-2018 JV59_01100 a365a4a86784227029f62bb19b9228d8 628 Pfam PF00990 Diguanylate cyclase, GGDEF domain 469 617 7.0E-34 T 14-10-2018 IPR000160 GGDEF domain JV59_01100 a365a4a86784227029f62bb19b9228d8 628 Gene3D G3DSA:1.20.5.170 27 73 8.6E-25 T 14-10-2018 JV59_01100 a365a4a86784227029f62bb19b9228d8 628 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 466 620 5.6E-38 T 14-10-2018 IPR000160 GGDEF domain JV59_34835 b86b0d760ae713220793db68e64fa073 181 SUPERFAMILY SSF53271 11 178 2.56E-51 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like JV59_34835 b86b0d760ae713220793db68e64fa073 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 177 1.3E-72 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 JV59_34835 b86b0d760ae713220793db68e64fa073 181 Pfam PF00156 Phosphoribosyl transferase domain 36 147 3.7E-13 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 JV59_34835 b86b0d760ae713220793db68e64fa073 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 38.065 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 JV59_34835 b86b0d760ae713220793db68e64fa073 181 Gene3D G3DSA:3.40.50.2020 1 181 7.9E-66 T 14-10-2018 JV59_01730 dfc7ea29e6ee5b6e8ae73668c497d012 650 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 102 594 6.1E-243 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 JV59_01730 dfc7ea29e6ee5b6e8ae73668c497d012 650 Gene3D G3DSA:1.20.58.760 398 601 6.3E-73 T 14-10-2018 JV59_01730 dfc7ea29e6ee5b6e8ae73668c497d012 650 SUPERFAMILY SSF140990 403 597 1.57E-75 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 JV59_01730 dfc7ea29e6ee5b6e8ae73668c497d012 650 SMART SM00382 185 324 5.1E-26 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_01730 dfc7ea29e6ee5b6e8ae73668c497d012 650 Pfam PF01434 Peptidase family M41 383 592 1.1E-81 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 JV59_01730 dfc7ea29e6ee5b6e8ae73668c497d012 650 Gene3D G3DSA:1.10.8.60 324 397 2.1E-27 T 14-10-2018 JV59_01730 dfc7ea29e6ee5b6e8ae73668c497d012 650 ProSitePatterns PS00674 AAA-protein family signature. 292 310 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 JV59_01730 dfc7ea29e6ee5b6e8ae73668c497d012 650 Gene3D G3DSA:3.40.50.300 137 323 6.6E-70 T 14-10-2018 JV59_01730 dfc7ea29e6ee5b6e8ae73668c497d012 650 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 613 37.302 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 JV59_01730 dfc7ea29e6ee5b6e8ae73668c497d012 650 Pfam PF06480 FtsH Extracellular 5 94 3.5E-12 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 JV59_01730 dfc7ea29e6ee5b6e8ae73668c497d012 650 SUPERFAMILY SSF52540 144 392 1.26E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_01730 dfc7ea29e6ee5b6e8ae73668c497d012 650 Gene3D G3DSA:2.40.50.920 24 100 3.7E-31 T 14-10-2018 JV59_01730 dfc7ea29e6ee5b6e8ae73668c497d012 650 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 189 321 5.1E-46 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JV59_23260 d44b1067d25a721cc3f3436dd2f0aef2 400 SUPERFAMILY SSF103473 2 378 9.55E-54 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_23260 d44b1067d25a721cc3f3436dd2f0aef2 400 Pfam PF07690 Major Facilitator Superfamily 15 230 3.5E-32 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_23260 d44b1067d25a721cc3f3436dd2f0aef2 400 Gene3D G3DSA:1.20.1720.10 9 383 2.4E-79 T 14-10-2018 JV59_36965 57bbd774d909bfc2c25210300e860088 321 Gene3D G3DSA:2.50.20.10 24 208 3.0E-54 T 14-10-2018 JV59_36965 57bbd774d909bfc2c25210300e860088 321 Pfam PF17188 MucB/RseB C-terminal domain 217 311 7.8E-27 T 14-10-2018 IPR033436 MucB/RseB, C-terminal JV59_36965 57bbd774d909bfc2c25210300e860088 321 Gene3D G3DSA:3.30.200.100 218 317 1.2E-27 T 14-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily JV59_36965 57bbd774d909bfc2c25210300e860088 321 PIRSF PIRSF005427 1 318 3.0E-85 T 14-10-2018 IPR005588 MucB/RseB JV59_36965 57bbd774d909bfc2c25210300e860088 321 Pfam PF03888 MucB/RseB N-terminal domain 26 195 9.1E-61 T 14-10-2018 IPR033434 MucB/RseB, N-terminal JV59_16350 fe65ee79996a8044a348f0dd658b6561 384 Gene3D G3DSA:1.10.287.90 47 118 1.4E-80 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_16350 fe65ee79996a8044a348f0dd658b6561 384 SUPERFAMILY SSF49503 121 259 2.49E-52 T 14-10-2018 IPR008972 Cupredoxin JV59_16350 fe65ee79996a8044a348f0dd658b6561 384 Gene3D G3DSA:2.60.40.420 119 255 1.4E-80 T 14-10-2018 IPR008972 Cupredoxin JV59_16350 fe65ee79996a8044a348f0dd658b6561 384 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 27 108 1.1E-14 T 14-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_16350 fe65ee79996a8044a348f0dd658b6561 384 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 39 255 9.3E-61 T 14-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_16350 fe65ee79996a8044a348f0dd658b6561 384 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 283 356 3.2E-11 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_16350 fe65ee79996a8044a348f0dd658b6561 384 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 191 239 - T 14-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_16350 fe65ee79996a8044a348f0dd658b6561 384 SUPERFAMILY SSF81464 28 117 3.27E-26 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_16350 fe65ee79996a8044a348f0dd658b6561 384 SUPERFAMILY SSF46626 225 364 7.76E-24 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_16350 fe65ee79996a8044a348f0dd658b6561 384 Gene3D G3DSA:1.10.760.10 263 384 3.5E-27 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_16350 fe65ee79996a8044a348f0dd658b6561 384 PRINTS PR01166 Cytochrome c oxidase subunit II signature 190 210 3.3E-41 T 14-10-2018 JV59_16350 fe65ee79996a8044a348f0dd658b6561 384 PRINTS PR01166 Cytochrome c oxidase subunit II signature 210 227 3.3E-41 T 14-10-2018 JV59_16350 fe65ee79996a8044a348f0dd658b6561 384 PRINTS PR01166 Cytochrome c oxidase subunit II signature 228 245 3.3E-41 T 14-10-2018 JV59_16350 fe65ee79996a8044a348f0dd658b6561 384 PRINTS PR01166 Cytochrome c oxidase subunit II signature 119 138 3.3E-41 T 14-10-2018 JV59_16350 fe65ee79996a8044a348f0dd658b6561 384 PRINTS PR01166 Cytochrome c oxidase subunit II signature 97 117 3.3E-41 T 14-10-2018 JV59_16350 fe65ee79996a8044a348f0dd658b6561 384 PRINTS PR01166 Cytochrome c oxidase subunit II signature 166 187 3.3E-41 T 14-10-2018 JV59_16350 fe65ee79996a8044a348f0dd658b6561 384 PRINTS PR01166 Cytochrome c oxidase subunit II signature 85 97 3.3E-41 T 14-10-2018 JV59_16350 fe65ee79996a8044a348f0dd658b6561 384 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 123 245 3.3E-36 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_23170 177bcda9653053b66774c25bada6645a 179 SMART SM00260 30 169 8.2E-29 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JV59_23170 177bcda9653053b66774c25bada6645a 179 Pfam PF01584 CheW-like domain 35 170 1.3E-32 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JV59_23170 177bcda9653053b66774c25bada6645a 179 SUPERFAMILY SSF50341 33 171 4.32E-33 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 JV59_23170 177bcda9653053b66774c25bada6645a 179 Gene3D G3DSA:2.30.30.40 37 163 6.9E-34 T 14-10-2018 JV59_23170 177bcda9653053b66774c25bada6645a 179 Gene3D G3DSA:2.40.50.180 53 164 6.9E-34 T 14-10-2018 JV59_29635 0f32ba6029e1727227c373dc76352110 327 Gene3D G3DSA:3.30.360.10 138 268 3.2E-98 T 14-10-2018 JV59_29635 0f32ba6029e1727227c373dc76352110 327 SUPERFAMILY SSF55347 124 287 2.13E-33 T 14-10-2018 JV59_29635 0f32ba6029e1727227c373dc76352110 327 SUPERFAMILY SSF51735 2 144 1.58E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_29635 0f32ba6029e1727227c373dc76352110 327 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 132 238 3.6E-10 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 JV59_29635 0f32ba6029e1727227c373dc76352110 327 Gene3D G3DSA:3.40.50.720 5 320 3.2E-98 T 14-10-2018 JV59_29635 0f32ba6029e1727227c373dc76352110 327 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 119 5.5E-22 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 JV59_29635 0f32ba6029e1727227c373dc76352110 327 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 1 325 5.0E-131 T 14-10-2018 IPR030827 Inositol 2-dehydrogenase JV59_23485 16e95c6b15f1c513d922f5b2e93007de 455 SUPERFAMILY SSF53738 151 259 1.96E-27 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_23485 16e95c6b15f1c513d922f5b2e93007de 455 Gene3D G3DSA:3.30.310.50 372 454 4.7E-25 T 14-10-2018 JV59_23485 16e95c6b15f1c513d922f5b2e93007de 455 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_23485 16e95c6b15f1c513d922f5b2e93007de 455 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 449 1.2E-10 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_23485 16e95c6b15f1c513d922f5b2e93007de 455 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 261 369 8.5E-25 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_23485 16e95c6b15f1c513d922f5b2e93007de 455 Gene3D G3DSA:3.40.120.10 170 252 1.9E-29 T 14-10-2018 JV59_23485 16e95c6b15f1c513d922f5b2e93007de 455 SUPERFAMILY SSF53738 261 366 1.57E-32 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_23485 16e95c6b15f1c513d922f5b2e93007de 455 Gene3D G3DSA:3.40.120.10 253 369 1.2E-35 T 14-10-2018 JV59_23485 16e95c6b15f1c513d922f5b2e93007de 455 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 135 2.0E-34 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_23485 16e95c6b15f1c513d922f5b2e93007de 455 SUPERFAMILY SSF55957 372 454 1.5E-19 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_23485 16e95c6b15f1c513d922f5b2e93007de 455 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 207 220 1.1E-29 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_23485 16e95c6b15f1c513d922f5b2e93007de 455 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 1.1E-29 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_23485 16e95c6b15f1c513d922f5b2e93007de 455 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 1.1E-29 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_23485 16e95c6b15f1c513d922f5b2e93007de 455 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 168 187 1.1E-29 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_23485 16e95c6b15f1c513d922f5b2e93007de 455 SUPERFAMILY SSF53738 4 174 4.32E-39 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_23485 16e95c6b15f1c513d922f5b2e93007de 455 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 152 256 1.3E-21 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_23485 16e95c6b15f1c513d922f5b2e93007de 455 Gene3D G3DSA:3.40.120.10 2 147 3.5E-50 T 14-10-2018 JV59_34740 af953957c468da9cd514b95ce8982bad 434 Hamap MF_00303 Trigger factor [tig]. 1 418 21.908 T 14-10-2018 IPR005215 Trigger factor GO:0015031 JV59_34740 af953957c468da9cd514b95ce8982bad 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 233 1.9E-12 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain JV59_34740 af953957c468da9cd514b95ce8982bad 434 SUPERFAMILY SSF54534 90 241 3.54E-35 T 14-10-2018 JV59_34740 af953957c468da9cd514b95ce8982bad 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 1.2E-42 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 JV59_34740 af953957c468da9cd514b95ce8982bad 434 TIGRFAM TIGR00115 tig: trigger factor 11 412 7.9E-144 T 14-10-2018 IPR005215 Trigger factor GO:0015031 JV59_34740 af953957c468da9cd514b95ce8982bad 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 3.5E-41 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 JV59_34740 af953957c468da9cd514b95ce8982bad 434 Gene3D G3DSA:1.10.3120.10 116 417 3.8E-108 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 JV59_34740 af953957c468da9cd514b95ce8982bad 434 SUPERFAMILY SSF109998 248 429 4.22E-50 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily JV59_34740 af953957c468da9cd514b95ce8982bad 434 SUPERFAMILY SSF102735 1 131 3.01E-41 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 JV59_34740 af953957c468da9cd514b95ce8982bad 434 Gene3D G3DSA:3.30.70.1050 1 115 3.3E-41 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 JV59_34740 af953957c468da9cd514b95ce8982bad 434 PIRSF PIRSF003095 1 434 5.1E-130 T 14-10-2018 IPR005215 Trigger factor GO:0015031 JV59_34740 af953957c468da9cd514b95ce8982bad 434 Gene3D G3DSA:3.10.50.40 150 246 3.8E-108 T 14-10-2018 JV59_01560 f45c3e5a8f7a8d32951012594efe8255 786 PIRSF PIRSF002799 3 786 0.0 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JV59_01560 f45c3e5a8f7a8d32951012594efe8255 786 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 44 766 0.0 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JV59_01560 f45c3e5a8f7a8d32951012594efe8255 786 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 189 723 1.5E-156 T 14-10-2018 JV59_01560 f45c3e5a8f7a8d32951012594efe8255 786 Gene3D G3DSA:3.30.2060.10 87 176 3.5E-259 T 14-10-2018 JV59_01560 f45c3e5a8f7a8d32951012594efe8255 786 SUPERFAMILY SSF53955 181 378 3.94E-69 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily JV59_01560 f45c3e5a8f7a8d32951012594efe8255 786 Gene3D G3DSA:1.10.3810.10 177 380 3.5E-259 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JV59_01560 f45c3e5a8f7a8d32951012594efe8255 786 Pfam PF00912 Transglycosylase 185 356 4.1E-59 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JV59_01560 f45c3e5a8f7a8d32951012594efe8255 786 Gene3D G3DSA:3.40.710.10 79 736 3.5E-259 T 14-10-2018 JV59_01560 f45c3e5a8f7a8d32951012594efe8255 786 Pfam PF14814 Bifunctional transglycosylase second domain 89 172 2.9E-24 T 14-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JV59_01560 f45c3e5a8f7a8d32951012594efe8255 786 Pfam PF00905 Penicillin binding protein transpeptidase domain 447 686 2.6E-24 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 JV59_01560 f45c3e5a8f7a8d32951012594efe8255 786 SUPERFAMILY SSF56601 338 772 1.18E-108 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JV59_00010 fe2b1a2292b77264cc4c428be1bedecb 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 1.2E-119 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 JV59_00010 fe2b1a2292b77264cc4c428be1bedecb 334 SUPERFAMILY SSF55347 154 308 1.2E-49 T 14-10-2018 JV59_00010 fe2b1a2292b77264cc4c428be1bedecb 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 14-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 JV59_00010 fe2b1a2292b77264cc4c428be1bedecb 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 37.9 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 JV59_00010 fe2b1a2292b77264cc4c428be1bedecb 334 Gene3D G3DSA:3.40.50.720 6 329 3.0E-121 T 14-10-2018 JV59_00010 fe2b1a2292b77264cc4c428be1bedecb 334 Gene3D G3DSA:3.30.360.10 153 312 3.0E-121 T 14-10-2018 JV59_00010 fe2b1a2292b77264cc4c428be1bedecb 334 SMART SM00859 3 146 7.9E-43 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 JV59_00010 fe2b1a2292b77264cc4c428be1bedecb 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 1.8E-15 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 JV59_00010 fe2b1a2292b77264cc4c428be1bedecb 334 SUPERFAMILY SSF51735 3 182 8.35E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_00010 fe2b1a2292b77264cc4c428be1bedecb 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 145 7.9E-29 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 JV59_21710 53fe2479c2fd4a8c2c1c75c25bddcacc 160 SUPERFAMILY SSF56524 21 125 3.01E-17 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 JV59_21710 53fe2479c2fd4a8c2c1c75c25bddcacc 160 Pfam PF00174 Oxidoreductase molybdopterin binding domain 51 120 5.6E-9 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 JV59_21710 53fe2479c2fd4a8c2c1c75c25bddcacc 160 Gene3D G3DSA:3.90.420.10 15 125 8.2E-8 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 JV59_19665 2d1989a927baa8fe6183f39003dfb87c 461 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 12 454 2.5E-39 T 14-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein JV59_19665 2d1989a927baa8fe6183f39003dfb87c 461 SMART SM00240 28 79 3.8E-5 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 JV59_19665 2d1989a927baa8fe6183f39003dfb87c 461 Gene3D G3DSA:2.60.200.20 3 113 2.6E-19 T 14-10-2018 JV59_19665 2d1989a927baa8fe6183f39003dfb87c 461 SUPERFAMILY SSF49879 20 105 4.97E-22 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 JV59_19665 2d1989a927baa8fe6183f39003dfb87c 461 Pfam PF00498 FHA domain 30 96 2.8E-14 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 JV59_35885 7110742b7141b7c64236035c7493e2b5 551 Gene3D G3DSA:3.30.20.10 178 248 8.5E-79 T 14-10-2018 JV59_35885 7110742b7141b7c64236035c7493e2b5 551 Pfam PF00182 Chitinase class I 106 326 2.3E-32 T 14-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 JV59_35885 7110742b7141b7c64236035c7493e2b5 551 Gene3D G3DSA:1.10.530.10 104 346 8.5E-79 T 14-10-2018 JV59_35885 7110742b7141b7c64236035c7493e2b5 551 SUPERFAMILY SSF51055 426 476 1.44E-15 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_35885 7110742b7141b7c64236035c7493e2b5 551 Gene3D G3DSA:2.10.10.20 433 475 1.7E-16 T 14-10-2018 JV59_35885 7110742b7141b7c64236035c7493e2b5 551 SMART SM00495 503 548 0.022 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_35885 7110742b7141b7c64236035c7493e2b5 551 SMART SM00495 433 475 1.0E-15 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_35885 7110742b7141b7c64236035c7493e2b5 551 Pfam PF02839 Carbohydrate binding domain 450 472 2.5E-5 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_35885 7110742b7141b7c64236035c7493e2b5 551 SUPERFAMILY SSF53955 89 350 1.35E-54 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily JV59_01115 b6fe4a0895b22d1be2a955861ed24a43 253 SUPERFAMILY SSF100950 79 233 8.58E-30 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JV59_01115 b6fe4a0895b22d1be2a955861ed24a43 253 SMART SM01134 73 234 2.6E-54 T 14-10-2018 JV59_01115 b6fe4a0895b22d1be2a955861ed24a43 253 Pfam PF00455 DeoR C terminal sensor domain 78 232 8.7E-43 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain JV59_01115 b6fe4a0895b22d1be2a955861ed24a43 253 SMART SM00420 9 61 4.1E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 JV59_01115 b6fe4a0895b22d1be2a955861ed24a43 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 JV59_01115 b6fe4a0895b22d1be2a955861ed24a43 253 SUPERFAMILY SSF46785 4 64 1.06E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_01115 b6fe4a0895b22d1be2a955861ed24a43 253 Pfam PF08220 DeoR-like helix-turn-helix domain 9 61 6.6E-14 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 JV59_19060 be4430e93d39fc569cfd3b0d5b943fa4 484 Gene3D G3DSA:3.30.565.10 350 482 2.0E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_19060 be4430e93d39fc569cfd3b0d5b943fa4 484 SUPERFAMILY SSF47384 271 342 7.06E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_19060 be4430e93d39fc569cfd3b0d5b943fa4 484 SUPERFAMILY SSF55874 356 479 8.76E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_19060 be4430e93d39fc569cfd3b0d5b943fa4 484 SMART SM00388 276 343 8.1E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_19060 be4430e93d39fc569cfd3b0d5b943fa4 484 Pfam PF00512 His Kinase A (phospho-acceptor) domain 281 332 2.7E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_19060 be4430e93d39fc569cfd3b0d5b943fa4 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 386 477 7.4E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_19060 be4430e93d39fc569cfd3b0d5b943fa4 484 Pfam PF11884 Domain of unknown function (DUF3404) 17 275 3.1E-107 T 14-10-2018 IPR021821 Protein of unknown function DUF3404 JV59_19060 be4430e93d39fc569cfd3b0d5b943fa4 484 SMART SM00387 381 479 7.4E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_19060 be4430e93d39fc569cfd3b0d5b943fa4 484 Gene3D G3DSA:1.10.287.130 269 340 5.2E-5 T 14-10-2018 JV59_33960 b843ae4df4329459db9e86794d44a263 398 Gene3D G3DSA:3.30.420.40 2 194 1.8E-74 T 14-10-2018 JV59_33960 b843ae4df4329459db9e86794d44a263 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 2.4E-169 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JV59_33960 b843ae4df4329459db9e86794d44a263 398 SUPERFAMILY SSF53067 3 195 4.99E-66 T 14-10-2018 JV59_33960 b843ae4df4329459db9e86794d44a263 398 Pfam PF00871 Acetokinase family 5 390 7.3E-165 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JV59_33960 b843ae4df4329459db9e86794d44a263 398 SUPERFAMILY SSF53067 155 395 1.67E-87 T 14-10-2018 JV59_33960 b843ae4df4329459db9e86794d44a263 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JV59_33960 b843ae4df4329459db9e86794d44a263 398 Gene3D G3DSA:3.30.420.40 195 397 3.5E-83 T 14-10-2018 JV59_33960 b843ae4df4329459db9e86794d44a263 398 PIRSF PIRSF000722 1 397 1.5E-147 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JV59_33960 b843ae4df4329459db9e86794d44a263 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 191.728 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JV59_33960 b843ae4df4329459db9e86794d44a263 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JV59_33960 b843ae4df4329459db9e86794d44a263 398 PRINTS PR00471 Acetate kinase family signature 172 185 5.4E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JV59_33960 b843ae4df4329459db9e86794d44a263 398 PRINTS PR00471 Acetate kinase family signature 377 389 5.4E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JV59_33960 b843ae4df4329459db9e86794d44a263 398 PRINTS PR00471 Acetate kinase family signature 298 311 5.4E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JV59_33960 b843ae4df4329459db9e86794d44a263 398 PRINTS PR00471 Acetate kinase family signature 202 223 5.4E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JV59_33960 b843ae4df4329459db9e86794d44a263 398 PRINTS PR00471 Acetate kinase family signature 321 337 5.4E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JV59_33960 b843ae4df4329459db9e86794d44a263 398 PRINTS PR00471 Acetate kinase family signature 5 16 5.4E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JV59_17685 4d4ea776b7b6552253ff2725961c66c9 229 Gene3D G3DSA:3.40.50.2300 1 134 1.7E-31 T 14-10-2018 JV59_17685 4d4ea776b7b6552253ff2725961c66c9 229 Pfam PF00072 Response regulator receiver domain 7 116 2.8E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_17685 4d4ea776b7b6552253ff2725961c66c9 229 SMART SM00448 5 115 1.2E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_17685 4d4ea776b7b6552253ff2725961c66c9 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 8.7E-12 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_17685 4d4ea776b7b6552253ff2725961c66c9 229 Gene3D G3DSA:1.10.10.10 135 229 2.3E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_17685 4d4ea776b7b6552253ff2725961c66c9 229 SUPERFAMILY SSF52172 3 127 7.4E-36 T 14-10-2018 IPR011006 CheY-like superfamily JV59_17685 4d4ea776b7b6552253ff2725961c66c9 229 SMART SM00862 149 224 2.4E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_17685 4d4ea776b7b6552253ff2725961c66c9 229 SUPERFAMILY SSF46894 141 224 6.24E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_23275 2b6148a0292186791922260a6b6e8528 361 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 269 9.4E-10 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JV59_23275 2b6148a0292186791922260a6b6e8528 361 SUPERFAMILY SSF111369 53 268 1.57E-18 T 14-10-2018 JV59_23275 2b6148a0292186791922260a6b6e8528 361 Gene3D G3DSA:1.10.287.470 97 170 1.1E-47 T 14-10-2018 JV59_23275 2b6148a0292186791922260a6b6e8528 361 Gene3D G3DSA:2.40.50.100 63 209 1.1E-47 T 14-10-2018 JV59_23275 2b6148a0292186791922260a6b6e8528 361 Gene3D G3DSA:2.40.420.20 282 357 1.1E-47 T 14-10-2018 JV59_23275 2b6148a0292186791922260a6b6e8528 361 Gene3D G3DSA:2.40.30.170 50 281 1.1E-47 T 14-10-2018 JV59_23275 2b6148a0292186791922260a6b6e8528 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 51 358 1.8E-55 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 JV59_19555 c84f2e117d076e8ae625222fbf619e60 567 Gene3D G3DSA:3.50.50.60 3 361 1.2E-186 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_19555 c84f2e117d076e8ae625222fbf619e60 567 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 327 5.0E-54 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JV59_19555 c84f2e117d076e8ae625222fbf619e60 567 Gene3D G3DSA:3.40.250.10 471 563 3.2E-24 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JV59_19555 c84f2e117d076e8ae625222fbf619e60 567 Pfam PF00581 Rhodanese-like domain 484 562 1.1E-9 T 14-10-2018 IPR001763 Rhodanese-like domain JV59_19555 c84f2e117d076e8ae625222fbf619e60 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 9.1E-17 T 14-10-2018 JV59_19555 c84f2e117d076e8ae625222fbf619e60 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 9.1E-17 T 14-10-2018 JV59_19555 c84f2e117d076e8ae625222fbf619e60 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 9.1E-17 T 14-10-2018 JV59_19555 c84f2e117d076e8ae625222fbf619e60 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 9.1E-17 T 14-10-2018 JV59_19555 c84f2e117d076e8ae625222fbf619e60 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 5.5E-22 T 14-10-2018 JV59_19555 c84f2e117d076e8ae625222fbf619e60 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 5.5E-22 T 14-10-2018 JV59_19555 c84f2e117d076e8ae625222fbf619e60 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 5.5E-22 T 14-10-2018 JV59_19555 c84f2e117d076e8ae625222fbf619e60 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 5.5E-22 T 14-10-2018 JV59_19555 c84f2e117d076e8ae625222fbf619e60 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 5.5E-22 T 14-10-2018 JV59_19555 c84f2e117d076e8ae625222fbf619e60 567 Gene3D G3DSA:3.50.50.60 115 461 1.2E-186 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_19555 c84f2e117d076e8ae625222fbf619e60 567 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 451 2.1E-15 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 JV59_19555 c84f2e117d076e8ae625222fbf619e60 567 SUPERFAMILY SSF55424 344 467 1.62E-34 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JV59_19555 c84f2e117d076e8ae625222fbf619e60 567 SUPERFAMILY SSF52821 456 562 3.54E-23 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JV59_19555 c84f2e117d076e8ae625222fbf619e60 567 SMART SM00450 473 567 8.9E-13 T 14-10-2018 IPR001763 Rhodanese-like domain JV59_19555 c84f2e117d076e8ae625222fbf619e60 567 SUPERFAMILY SSF51905 155 340 1.94E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_19555 c84f2e117d076e8ae625222fbf619e60 567 SUPERFAMILY SSF51905 2 198 1.77E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_29860 3d8624058f275aa3d9119f40ef37f3b0 457 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 442 8.1E-155 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_29860 3d8624058f275aa3d9119f40ef37f3b0 457 PRINTS PR00175 Sodium/alanine symporter signature 352 374 7.7E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_29860 3d8624058f275aa3d9119f40ef37f3b0 457 PRINTS PR00175 Sodium/alanine symporter signature 211 230 7.7E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_29860 3d8624058f275aa3d9119f40ef37f3b0 457 PRINTS PR00175 Sodium/alanine symporter signature 306 324 7.7E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_29860 3d8624058f275aa3d9119f40ef37f3b0 457 PRINTS PR00175 Sodium/alanine symporter signature 411 431 7.7E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_29860 3d8624058f275aa3d9119f40ef37f3b0 457 PRINTS PR00175 Sodium/alanine symporter signature 91 113 7.7E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_29860 3d8624058f275aa3d9119f40ef37f3b0 457 PRINTS PR00175 Sodium/alanine symporter signature 183 201 7.7E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_29860 3d8624058f275aa3d9119f40ef37f3b0 457 Pfam PF01235 Sodium:alanine symporter family 53 451 1.3E-138 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_29860 3d8624058f275aa3d9119f40ef37f3b0 457 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 91 106 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_38270 388ccd063b3f56ee13c45635dda6285a 144 SUPERFAMILY SSF52821 15 142 4.98E-31 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JV59_38270 388ccd063b3f56ee13c45635dda6285a 144 Gene3D G3DSA:3.40.250.10 22 143 6.2E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JV59_38270 388ccd063b3f56ee13c45635dda6285a 144 Pfam PF00581 Rhodanese-like domain 42 135 4.9E-18 T 14-10-2018 IPR001763 Rhodanese-like domain JV59_38270 388ccd063b3f56ee13c45635dda6285a 144 SMART SM00450 40 138 4.3E-22 T 14-10-2018 IPR001763 Rhodanese-like domain JV59_35420 159b62483ab95aa0e347ee39683ee50e 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 3.0E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_35420 159b62483ab95aa0e347ee39683ee50e 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.7E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_35420 159b62483ab95aa0e347ee39683ee50e 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.7E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_35420 159b62483ab95aa0e347ee39683ee50e 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.7E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_35420 159b62483ab95aa0e347ee39683ee50e 302 Gene3D G3DSA:3.40.190.10 163 261 9.5E-60 T 14-10-2018 JV59_35420 159b62483ab95aa0e347ee39683ee50e 302 Gene3D G3DSA:1.10.10.10 7 95 2.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_35420 159b62483ab95aa0e347ee39683ee50e 302 Gene3D G3DSA:3.40.190.10 103 288 9.5E-60 T 14-10-2018 JV59_35420 159b62483ab95aa0e347ee39683ee50e 302 SUPERFAMILY SSF53850 92 295 2.71E-39 T 14-10-2018 JV59_35420 159b62483ab95aa0e347ee39683ee50e 302 Pfam PF03466 LysR substrate binding domain 91 292 1.2E-37 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_35420 159b62483ab95aa0e347ee39683ee50e 302 SUPERFAMILY SSF46785 3 85 2.2E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_13275 17926ae55b2e0272fab5067a723bad2c 1225 SUPERFAMILY SSF47644 654 740 1.96E-29 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JV59_13275 17926ae55b2e0272fab5067a723bad2c 1225 Gene3D G3DSA:3.40.50.280 745 896 3.1E-56 T 14-10-2018 JV59_13275 17926ae55b2e0272fab5067a723bad2c 1225 SUPERFAMILY SSF56507 903 1225 3.14E-130 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JV59_13275 17926ae55b2e0272fab5067a723bad2c 1225 SUPERFAMILY SSF52242 745 895 1.15E-45 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 JV59_13275 17926ae55b2e0272fab5067a723bad2c 1225 TIGRFAM TIGR02082 metH: methionine synthase 13 1194 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JV59_13275 17926ae55b2e0272fab5067a723bad2c 1225 Gene3D G3DSA:3.20.20.330 2 340 1.7E-129 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 JV59_13275 17926ae55b2e0272fab5067a723bad2c 1225 Pfam PF00809 Pterin binding enzyme 361 599 4.8E-59 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JV59_13275 17926ae55b2e0272fab5067a723bad2c 1225 SUPERFAMILY SSF82282 8 400 5.1E-119 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 JV59_13275 17926ae55b2e0272fab5067a723bad2c 1225 Gene3D G3DSA:3.20.20.20 341 643 1.5E-129 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JV59_13275 17926ae55b2e0272fab5067a723bad2c 1225 SUPERFAMILY SSF51717 357 631 8.37E-87 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JV59_13275 17926ae55b2e0272fab5067a723bad2c 1225 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1210 1.1E-122 T 14-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JV59_13275 17926ae55b2e0272fab5067a723bad2c 1225 Gene3D G3DSA:3.10.196.10 909 1224 1.2E-145 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JV59_13275 17926ae55b2e0272fab5067a723bad2c 1225 Pfam PF02574 Homocysteine S-methyltransferase 18 326 2.0E-81 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 JV59_13275 17926ae55b2e0272fab5067a723bad2c 1225 PIRSF PIRSF000381 3 1197 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JV59_13275 17926ae55b2e0272fab5067a723bad2c 1225 Pfam PF02607 B12 binding domain 660 734 1.0E-25 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JV59_13275 17926ae55b2e0272fab5067a723bad2c 1225 SMART SM01018 658 741 5.1E-46 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JV59_13275 17926ae55b2e0272fab5067a723bad2c 1225 Pfam PF02310 B12 binding domain 749 842 2.9E-18 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 JV59_13275 17926ae55b2e0272fab5067a723bad2c 1225 Gene3D G3DSA:1.10.1240.10 650 738 9.9E-41 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JV59_13275 17926ae55b2e0272fab5067a723bad2c 1225 Gene3D G3DSA:1.10.288.10 938 1094 1.2E-145 T 14-10-2018 JV59_37070 c496d697e475708f1c2936903960e817 319 Gene3D G3DSA:1.10.10.10 14 104 2.3E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_37070 c496d697e475708f1c2936903960e817 319 Gene3D G3DSA:3.40.190.10 108 307 3.4E-40 T 14-10-2018 JV59_37070 c496d697e475708f1c2936903960e817 319 Gene3D G3DSA:3.40.190.10 187 283 3.4E-40 T 14-10-2018 JV59_37070 c496d697e475708f1c2936903960e817 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_37070 c496d697e475708f1c2936903960e817 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_37070 c496d697e475708f1c2936903960e817 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_37070 c496d697e475708f1c2936903960e817 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 1.3E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_37070 c496d697e475708f1c2936903960e817 319 SUPERFAMILY SSF46785 22 99 2.72E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_37070 c496d697e475708f1c2936903960e817 319 SUPERFAMILY SSF53850 106 309 5.97E-39 T 14-10-2018 JV59_37070 c496d697e475708f1c2936903960e817 319 Pfam PF03466 LysR substrate binding domain 124 306 1.7E-22 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_31625 f92288bb75fef485301be1b90503a240 547 Gene3D G3DSA:3.30.230.10 291 533 3.7E-91 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JV59_31625 f92288bb75fef485301be1b90503a240 547 SUPERFAMILY SSF54211 314 505 6.83E-34 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JV59_31625 f92288bb75fef485301be1b90503a240 547 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 400 504 1.3E-10 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 JV59_31625 f92288bb75fef485301be1b90503a240 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 427 446 1.2E-10 T 14-10-2018 JV59_31625 f92288bb75fef485301be1b90503a240 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 314 330 1.2E-10 T 14-10-2018 JV59_31625 f92288bb75fef485301be1b90503a240 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 397 416 1.2E-10 T 14-10-2018 JV59_31625 f92288bb75fef485301be1b90503a240 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 457 475 1.2E-10 T 14-10-2018 JV59_31625 f92288bb75fef485301be1b90503a240 547 Gene3D G3DSA:3.40.50.300 33 193 6.3E-10 T 14-10-2018 JV59_31625 f92288bb75fef485301be1b90503a240 547 Pfam PF13654 AAA domain 79 288 2.3E-21 T 14-10-2018 JV59_03340 f0238a7dbbb0cdeb1e35c028e840ac35 211 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 10 193 3.6E-66 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 JV59_03340 f0238a7dbbb0cdeb1e35c028e840ac35 211 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 194 27.144 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 JV59_03340 f0238a7dbbb0cdeb1e35c028e840ac35 211 Pfam PF04205 FMN-binding domain 100 188 9.8E-20 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 JV59_03340 f0238a7dbbb0cdeb1e35c028e840ac35 211 PIRSF PIRSF006091 1 206 1.5E-80 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 JV59_03340 f0238a7dbbb0cdeb1e35c028e840ac35 211 SMART SM00900 100 192 1.5E-34 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 JV59_25260 5509dc33a9d73918f3ab4f7a603dfe7b 1033 SUPERFAMILY SSF56801 410 973 7.06E-129 T 14-10-2018 JV59_25260 5509dc33a9d73918f3ab4f7a603dfe7b 1033 ProSitePatterns PS00455 Putative AMP-binding domain signature. 588 599 - T 14-10-2018 IPR020845 AMP-binding, conserved site JV59_25260 5509dc33a9d73918f3ab4f7a603dfe7b 1033 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 468 874 8.4E-104 T 14-10-2018 IPR010071 Amino acid adenylation domain JV59_25260 5509dc33a9d73918f3ab4f7a603dfe7b 1033 Gene3D G3DSA:1.10.1200.10 953 1031 3.3E-20 T 14-10-2018 IPR036736 ACP-like superfamily JV59_25260 5509dc33a9d73918f3ab4f7a603dfe7b 1033 SUPERFAMILY SSF52777 211 416 9.78E-19 T 14-10-2018 JV59_25260 5509dc33a9d73918f3ab4f7a603dfe7b 1033 Pfam PF13193 AMP-binding enzyme C-terminal domain 860 934 1.4E-9 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JV59_25260 5509dc33a9d73918f3ab4f7a603dfe7b 1033 Gene3D G3DSA:3.30.300.30 847 952 4.2E-27 T 14-10-2018 JV59_25260 5509dc33a9d73918f3ab4f7a603dfe7b 1033 Pfam PF00501 AMP-binding enzyme 447 852 3.4E-78 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JV59_25260 5509dc33a9d73918f3ab4f7a603dfe7b 1033 Pfam PF00550 Phosphopantetheine attachment site 964 1027 1.2E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain JV59_25260 5509dc33a9d73918f3ab4f7a603dfe7b 1033 Gene3D G3DSA:3.30.559.30 190 433 2.7E-21 T 14-10-2018 JV59_25260 5509dc33a9d73918f3ab4f7a603dfe7b 1033 SUPERFAMILY SSF47336 954 1027 3.4E-14 T 14-10-2018 IPR036736 ACP-like superfamily JV59_25260 5509dc33a9d73918f3ab4f7a603dfe7b 1033 Gene3D G3DSA:3.40.50.12780 434 846 3.0E-103 T 14-10-2018 JV59_25260 5509dc33a9d73918f3ab4f7a603dfe7b 1033 ProSitePatterns PS00012 Phosphopantetheine attachment site. 986 1001 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site JV59_25260 5509dc33a9d73918f3ab4f7a603dfe7b 1033 SUPERFAMILY SSF52777 29 178 4.11E-15 T 14-10-2018 JV59_25260 5509dc33a9d73918f3ab4f7a603dfe7b 1033 Pfam PF00668 Condensation domain 33 427 1.5E-24 T 14-10-2018 IPR001242 Condensation domain JV59_25260 5509dc33a9d73918f3ab4f7a603dfe7b 1033 Gene3D G3DSA:3.30.559.10 7 187 1.8E-17 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JV59_36335 7625b1abdc2bd9c2f86715639cc23390 496 Gene3D G3DSA:3.30.450.380 12 240 1.3E-42 T 14-10-2018 JV59_36335 7625b1abdc2bd9c2f86715639cc23390 496 Pfam PF00437 Type II/IV secretion system protein 145 422 1.2E-83 T 14-10-2018 IPR001482 Type II/IV secretion system protein JV59_36335 7625b1abdc2bd9c2f86715639cc23390 496 Gene3D G3DSA:3.40.50.300 241 466 1.0E-69 T 14-10-2018 JV59_36335 7625b1abdc2bd9c2f86715639cc23390 496 SUPERFAMILY SSF52540 128 459 1.55E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_28810 3f00bacb39b13a1dfe3dc3659e33548d 690 Pfam PF06733 DEAD_2 195 261 1.5E-4 T 14-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 JV59_28810 3f00bacb39b13a1dfe3dc3659e33548d 690 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 33 690 36.475 T 14-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 JV59_28810 3f00bacb39b13a1dfe3dc3659e33548d 690 SUPERFAMILY SSF52540 15 666 8.8E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_28810 3f00bacb39b13a1dfe3dc3659e33548d 690 Gene3D G3DSA:3.40.50.300 496 688 1.1E-34 T 14-10-2018 JV59_28810 3f00bacb39b13a1dfe3dc3659e33548d 690 SMART SM00491 535 671 1.3E-29 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 JV59_28810 3f00bacb39b13a1dfe3dc3659e33548d 690 Pfam PF13307 Helicase C-terminal domain 526 684 7.7E-38 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 JV59_28810 3f00bacb39b13a1dfe3dc3659e33548d 690 Gene3D G3DSA:3.40.50.300 25 305 5.3E-39 T 14-10-2018 JV59_32090 f691bba7d48c92daadb9fc8d20343857 289 Pfam PF03466 LysR substrate binding domain 88 287 3.1E-42 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_32090 f691bba7d48c92daadb9fc8d20343857 289 SUPERFAMILY SSF46785 1 86 2.87E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_32090 f691bba7d48c92daadb9fc8d20343857 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.1E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_32090 f691bba7d48c92daadb9fc8d20343857 289 Gene3D G3DSA:1.10.10.10 1 91 4.7E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_32090 f691bba7d48c92daadb9fc8d20343857 289 Gene3D G3DSA:3.40.190.290 92 289 5.3E-44 T 14-10-2018 JV59_32090 f691bba7d48c92daadb9fc8d20343857 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.5E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_32090 f691bba7d48c92daadb9fc8d20343857 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.5E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_32090 f691bba7d48c92daadb9fc8d20343857 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.5E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_32090 f691bba7d48c92daadb9fc8d20343857 289 SUPERFAMILY SSF53850 90 288 1.09E-39 T 14-10-2018 JV59_34305 490a5e57f3607285697e9b6496db33fb 292 Pfam PF04280 Tim44-like domain 170 291 3.7E-14 T 14-10-2018 IPR007379 Tim44-like domain JV59_34305 490a5e57f3607285697e9b6496db33fb 292 Gene3D G3DSA:3.10.450.240 167 291 5.5E-6 T 14-10-2018 JV59_34305 490a5e57f3607285697e9b6496db33fb 292 SMART SM00978 161 292 9.7E-35 T 14-10-2018 IPR007379 Tim44-like domain JV59_34305 490a5e57f3607285697e9b6496db33fb 292 SUPERFAMILY SSF54427 171 291 1.4E-15 T 14-10-2018 IPR032710 NTF2-like domain superfamily JV59_23780 914ee7a93cb440be65f11d38f5e8daf4 142 Pfam PF11747 Killing trait 35 80 1.3E-10 T 14-10-2018 IPR021070 Killing trait, RebB JV59_28050 c585fdf267ba6f44112ea7d61d491990 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 70 81 2.6E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_28050 c585fdf267ba6f44112ea7d61d491990 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 2.6E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_28050 c585fdf267ba6f44112ea7d61d491990 226 Pfam PF00106 short chain dehydrogenase 2 187 2.3E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_28050 c585fdf267ba6f44112ea7d61d491990 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 70 81 2.5E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_28050 c585fdf267ba6f44112ea7d61d491990 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.5E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_28050 c585fdf267ba6f44112ea7d61d491990 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 2.5E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_28050 c585fdf267ba6f44112ea7d61d491990 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 2.5E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_28050 c585fdf267ba6f44112ea7d61d491990 226 SUPERFAMILY SSF51735 1 226 3.02E-77 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_28050 c585fdf267ba6f44112ea7d61d491990 226 Gene3D G3DSA:3.40.50.720 1 226 7.9E-62 T 14-10-2018 JV59_26325 c917675d93e91612d52ab7a42c31ac97 281 SMART SM00382 42 184 1.2E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_26325 c917675d93e91612d52ab7a42c31ac97 281 Gene3D G3DSA:3.40.50.300 28 183 6.6E-14 T 14-10-2018 JV59_26325 c917675d93e91612d52ab7a42c31ac97 281 SUPERFAMILY SSF52540 19 262 6.7E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_26325 c917675d93e91612d52ab7a42c31ac97 281 Pfam PF13401 AAA domain 42 168 3.5E-22 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_38455 0524ab45e3b6f455fb6aa6285358fcee 320 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 80 317 8.6E-69 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JV59_38455 0524ab45e3b6f455fb6aa6285358fcee 320 Pfam PF03099 Biotin/lipoate A/B protein ligase family 83 207 1.4E-20 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 JV59_38455 0524ab45e3b6f455fb6aa6285358fcee 320 Gene3D G3DSA:2.30.30.100 271 313 4.8E-20 T 14-10-2018 JV59_38455 0524ab45e3b6f455fb6aa6285358fcee 320 Gene3D G3DSA:1.10.10.10 1 64 7.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_38455 0524ab45e3b6f455fb6aa6285358fcee 320 SUPERFAMILY SSF46785 3 60 1.43E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_38455 0524ab45e3b6f455fb6aa6285358fcee 320 SUPERFAMILY SSF55681 71 268 7.71E-60 T 14-10-2018 JV59_38455 0524ab45e3b6f455fb6aa6285358fcee 320 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 33.349 T 14-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 JV59_38455 0524ab45e3b6f455fb6aa6285358fcee 320 SUPERFAMILY SSF50037 271 317 7.78E-11 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal JV59_38455 0524ab45e3b6f455fb6aa6285358fcee 320 Pfam PF08279 HTH domain 8 59 2.5E-14 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 JV59_38455 0524ab45e3b6f455fb6aa6285358fcee 320 Gene3D G3DSA:3.30.930.10 65 270 3.7E-66 T 14-10-2018 JV59_38455 0524ab45e3b6f455fb6aa6285358fcee 320 Pfam PF02237 Biotin protein ligase C terminal domain 271 317 1.2E-11 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JV59_17255 caf98f9c125e7c33940ae7c00443e984 449 PIRSF PIRSF000124 1 447 4.9E-144 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 JV59_17255 caf98f9c125e7c33940ae7c00443e984 449 PIRSF PIRSF500134 1 449 4.6E-180 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 JV59_17255 caf98f9c125e7c33940ae7c00443e984 449 SMART SM00984 328 432 4.6E-46 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 JV59_17255 caf98f9c125e7c33940ae7c00443e984 449 SUPERFAMILY SSF52413 321 443 3.53E-35 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 JV59_17255 caf98f9c125e7c33940ae7c00443e984 449 SUPERFAMILY SSF51735 1 201 6.91E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_17255 caf98f9c125e7c33940ae7c00443e984 449 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 187 1.6E-64 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 JV59_17255 caf98f9c125e7c33940ae7c00443e984 449 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 210 301 3.3E-38 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 JV59_17255 caf98f9c125e7c33940ae7c00443e984 449 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 328 431 9.4E-27 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 JV59_17255 caf98f9c125e7c33940ae7c00443e984 449 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 428 1.5E-133 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 JV59_17255 caf98f9c125e7c33940ae7c00443e984 449 Gene3D G3DSA:3.40.50.720 241 449 1.1E-71 T 14-10-2018 JV59_17255 caf98f9c125e7c33940ae7c00443e984 449 SUPERFAMILY SSF48179 210 307 5.1E-33 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JV59_17255 caf98f9c125e7c33940ae7c00443e984 449 Gene3D G3DSA:1.20.5.100 209 240 4.5E-18 T 14-10-2018 JV59_17255 caf98f9c125e7c33940ae7c00443e984 449 Gene3D G3DSA:3.40.50.720 1 208 2.7E-76 T 14-10-2018 JV59_22620 e8a9680b140286812e798d908cece749 328 TIGRFAM TIGR02961 allantoicase: allantoicase 7 324 1.3E-147 T 14-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 JV59_22620 e8a9680b140286812e798d908cece749 328 Gene3D G3DSA:2.60.120.260 166 328 3.7E-58 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily JV59_22620 e8a9680b140286812e798d908cece749 328 Gene3D G3DSA:2.60.120.260 1 165 2.9E-57 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily JV59_22620 e8a9680b140286812e798d908cece749 328 Hamap MF_00813 Probable allantoicase [alc]. 1 327 47.282 T 14-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 JV59_22620 e8a9680b140286812e798d908cece749 328 Pfam PF03561 Allantoicase repeat 184 324 7.9E-49 T 14-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 JV59_22620 e8a9680b140286812e798d908cece749 328 Pfam PF03561 Allantoicase repeat 17 161 6.2E-45 T 14-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 JV59_22620 e8a9680b140286812e798d908cece749 328 SUPERFAMILY SSF49785 3 163 1.55E-60 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily JV59_22620 e8a9680b140286812e798d908cece749 328 SUPERFAMILY SSF49785 168 325 3.57E-56 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily JV59_22620 e8a9680b140286812e798d908cece749 328 PIRSF PIRSF016516 2 328 1.1E-151 T 14-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 JV59_19765 4d2df0c9a83971dbdf2dc6aeeadfb8ae 1581 Gene3D G3DSA:3.30.1330.60 631 751 4.2E-14 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_19765 4d2df0c9a83971dbdf2dc6aeeadfb8ae 1581 SUPERFAMILY SSF103088 644 750 2.22E-13 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_19765 4d2df0c9a83971dbdf2dc6aeeadfb8ae 1581 Pfam PF00691 OmpA family 649 743 6.5E-8 T 14-10-2018 IPR006665 OmpA-like domain JV59_22215 1052a4d730fa88dc727c6018533eb5b3 278 Gene3D G3DSA:3.40.50.1820 21 264 6.9E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_22215 1052a4d730fa88dc727c6018533eb5b3 278 SUPERFAMILY SSF53474 20 256 2.14E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_22215 1052a4d730fa88dc727c6018533eb5b3 278 Pfam PF00975 Thioesterase domain 21 257 2.1E-37 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 JV59_32130 7eec7039c77c7ff6c7114a5004d233e1 342 Gene3D G3DSA:3.40.630.10 1 342 6.4E-119 T 14-10-2018 JV59_32130 7eec7039c77c7ff6c7114a5004d233e1 342 SUPERFAMILY SSF53187 14 329 3.97E-77 T 14-10-2018 JV59_32130 7eec7039c77c7ff6c7114a5004d233e1 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 129.804 T 14-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 JV59_32130 7eec7039c77c7ff6c7114a5004d233e1 342 PIRSF PIRSF017020 4 336 5.8E-121 T 14-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 JV59_32130 7eec7039c77c7ff6c7114a5004d233e1 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 54 329 2.6E-66 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 JV59_30275 c2f3b1fbca1ee9e4e29808dc9ed79a92 413 SUPERFAMILY SSF142433 252 386 6.67E-8 T 14-10-2018 IPR036653 CinA-like, C-terminal JV59_30275 c2f3b1fbca1ee9e4e29808dc9ed79a92 413 Gene3D G3DSA:3.40.980.10 1 172 9.1E-49 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily JV59_30275 c2f3b1fbca1ee9e4e29808dc9ed79a92 413 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 357 3.4E-83 T 14-10-2018 IPR008135 Competence-induced protein CinA JV59_30275 c2f3b1fbca1ee9e4e29808dc9ed79a92 413 Pfam PF00994 Probable molybdopterin binding domain 5 170 3.3E-32 T 14-10-2018 IPR001453 MoaB/Mog domain JV59_30275 c2f3b1fbca1ee9e4e29808dc9ed79a92 413 SMART SM00852 5 172 6.4E-34 T 14-10-2018 IPR001453 MoaB/Mog domain JV59_30275 c2f3b1fbca1ee9e4e29808dc9ed79a92 413 PIRSF PIRSF006728 1 392 9.0E-113 T 14-10-2018 IPR008135 Competence-induced protein CinA JV59_30275 c2f3b1fbca1ee9e4e29808dc9ed79a92 413 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 412 106.358 T 14-10-2018 IPR008135 Competence-induced protein CinA JV59_30275 c2f3b1fbca1ee9e4e29808dc9ed79a92 413 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 166 1.6E-27 T 14-10-2018 IPR001453 MoaB/Mog domain JV59_30275 c2f3b1fbca1ee9e4e29808dc9ed79a92 413 SUPERFAMILY SSF53218 2 205 3.01E-36 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily JV59_18245 bed710e7a95e763829ab4b297cfc09db 1222 SUPERFAMILY SSF52540 22 111 2.95E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_18245 bed710e7a95e763829ab4b297cfc09db 1222 Pfam PF12128 Protein of unknown function (DUF3584) 12 1191 1.2E-153 T 14-10-2018 IPR021979 Protein of unknown function DUF3584 JV59_15940 25d68ae67866889982a8c58d6905d92e 595 SUPERFAMILY SSF55920 307 561 1.44E-50 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like JV59_15940 25d68ae67866889982a8c58d6905d92e 595 Pfam PF00557 Metallopeptidase family M24 313 525 9.2E-42 T 14-10-2018 IPR000994 Peptidase M24 JV59_15940 25d68ae67866889982a8c58d6905d92e 595 Pfam PF16188 C-terminal region of peptidase_M24 536 595 3.2E-22 T 14-10-2018 IPR032416 Peptidase M24, C-terminal domain JV59_15940 25d68ae67866889982a8c58d6905d92e 595 SUPERFAMILY SSF53092 8 135 1.33E-12 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JV59_15940 25d68ae67866889982a8c58d6905d92e 595 Pfam PF16189 Creatinase/Prolidase N-terminal domain 152 310 4.7E-39 T 14-10-2018 JV59_15940 25d68ae67866889982a8c58d6905d92e 595 Gene3D G3DSA:3.40.350.10 151 302 9.7E-37 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JV59_15940 25d68ae67866889982a8c58d6905d92e 595 Pfam PF01321 Creatinase/Prolidase N-terminal domain 9 147 1.7E-19 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 JV59_15940 25d68ae67866889982a8c58d6905d92e 595 Gene3D G3DSA:3.40.350.10 1 150 3.2E-44 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JV59_15940 25d68ae67866889982a8c58d6905d92e 595 Gene3D G3DSA:3.90.230.10 304 595 1.4E-91 T 14-10-2018 JV59_18415 5f4ce9812a88eb95e9b67992545b4d70 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JV59_18415 5f4ce9812a88eb95e9b67992545b4d70 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 124 2.8E-35 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JV59_18415 5f4ce9812a88eb95e9b67992545b4d70 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JV59_18415 5f4ce9812a88eb95e9b67992545b4d70 389 SUPERFAMILY SSF47203 234 386 6.93E-50 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JV59_18415 5f4ce9812a88eb95e9b67992545b4d70 389 SUPERFAMILY SSF56645 5 249 1.83E-85 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JV59_18415 5f4ce9812a88eb95e9b67992545b4d70 389 Gene3D G3DSA:1.20.140.10 241 385 4.4E-50 T 14-10-2018 JV59_18415 5f4ce9812a88eb95e9b67992545b4d70 389 PIRSF PIRSF016578 137 389 4.1E-12 T 14-10-2018 JV59_18415 5f4ce9812a88eb95e9b67992545b4d70 389 PIRSF PIRSF016578 12 102 0.013 T 14-10-2018 JV59_18415 5f4ce9812a88eb95e9b67992545b4d70 389 Gene3D G3DSA:1.10.540.10 2 127 3.7E-44 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JV59_18415 5f4ce9812a88eb95e9b67992545b4d70 389 Gene3D G3DSA:2.40.110.10 128 240 7.0E-47 T 14-10-2018 JV59_18415 5f4ce9812a88eb95e9b67992545b4d70 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 1.7E-45 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JV59_18415 5f4ce9812a88eb95e9b67992545b4d70 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 1.5E-26 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JV59_37920 8bf69e05039b95aa2e8652c0d09f3bc2 245 SUPERFAMILY SSF75217 69 244 7.19E-48 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases JV59_37920 8bf69e05039b95aa2e8652c0d09f3bc2 245 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 2.5E-86 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 JV59_37920 8bf69e05039b95aa2e8652c0d09f3bc2 245 SMART SM00967 5 81 1.6E-18 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 JV59_37920 8bf69e05039b95aa2e8652c0d09f3bc2 245 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.589 T 14-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB JV59_37920 8bf69e05039b95aa2e8652c0d09f3bc2 245 Gene3D G3DSA:3.30.1330.30 1 77 4.9E-26 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like JV59_37920 8bf69e05039b95aa2e8652c0d09f3bc2 245 Pfam PF00588 SpoU rRNA Methylase family 97 237 1.8E-38 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 JV59_37920 8bf69e05039b95aa2e8652c0d09f3bc2 245 SUPERFAMILY SSF55315 3 77 9.89E-19 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like JV59_37920 8bf69e05039b95aa2e8652c0d09f3bc2 245 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 5.4E-20 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 JV59_37920 8bf69e05039b95aa2e8652c0d09f3bc2 245 Gene3D G3DSA:3.40.1280.10 78 244 1.3E-63 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JV59_38790 8487f068bf2460010dae6679e90fbd78 227 Pfam PF00588 SpoU rRNA Methylase family 20 158 1.4E-34 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 JV59_38790 8487f068bf2460010dae6679e90fbd78 227 SUPERFAMILY SSF75217 4 176 3.01E-46 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases JV59_38790 8487f068bf2460010dae6679e90fbd78 227 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 196 34.92 T 14-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 JV59_38790 8487f068bf2460010dae6679e90fbd78 227 Gene3D G3DSA:3.40.1280.10 1 204 2.2E-59 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JV59_38790 8487f068bf2460010dae6679e90fbd78 227 Pfam PF12105 SpoU, rRNA methylase, C-terminal 162 217 3.1E-25 T 14-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 JV59_19760 0b075990415453bbdd1a9cb813c1100a 545 SUPERFAMILY SSF46689 489 542 2.01E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_19760 0b075990415453bbdd1a9cb813c1100a 545 Pfam PF00158 Sigma-54 interaction domain 213 377 2.4E-69 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JV59_19760 0b075990415453bbdd1a9cb813c1100a 545 Pfam PF01590 GAF domain 26 167 1.3E-4 T 14-10-2018 IPR003018 GAF domain GO:0005515 JV59_19760 0b075990415453bbdd1a9cb813c1100a 545 SUPERFAMILY SSF52540 214 449 8.82E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_19760 0b075990415453bbdd1a9cb813c1100a 545 Gene3D G3DSA:1.10.10.60 478 543 5.8E-13 T 14-10-2018 JV59_19760 0b075990415453bbdd1a9cb813c1100a 545 Gene3D G3DSA:3.30.450.40 4 173 2.0E-16 T 14-10-2018 IPR029016 GAF-like domain superfamily JV59_19760 0b075990415453bbdd1a9cb813c1100a 545 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 425 434 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site JV59_19760 0b075990415453bbdd1a9cb813c1100a 545 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 297 312 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JV59_19760 0b075990415453bbdd1a9cb813c1100a 545 Pfam PF02954 Bacterial regulatory protein, Fis family 501 539 1.1E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_19760 0b075990415453bbdd1a9cb813c1100a 545 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 522 542 9.0E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_19760 0b075990415453bbdd1a9cb813c1100a 545 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 505 522 9.0E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_19760 0b075990415453bbdd1a9cb813c1100a 545 Gene3D G3DSA:3.40.50.300 196 382 3.4E-62 T 14-10-2018 JV59_19760 0b075990415453bbdd1a9cb813c1100a 545 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 235 248 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JV59_19760 0b075990415453bbdd1a9cb813c1100a 545 SMART SM00065 25 180 0.0011 T 14-10-2018 IPR003018 GAF domain GO:0005515 JV59_19760 0b075990415453bbdd1a9cb813c1100a 545 Gene3D G3DSA:1.10.8.60 383 470 1.1E-21 T 14-10-2018 JV59_19760 0b075990415453bbdd1a9cb813c1100a 545 SMART SM00382 231 378 7.5E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_19760 0b075990415453bbdd1a9cb813c1100a 545 SUPERFAMILY SSF55781 6 179 3.71E-16 T 14-10-2018 JV59_18775 38cc89095920c271921e08cc2609bab7 458 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JV59_18775 38cc89095920c271921e08cc2609bab7 458 Gene3D G3DSA:3.40.50.300 210 369 3.8E-46 T 14-10-2018 JV59_18775 38cc89095920c271921e08cc2609bab7 458 Pfam PF00270 DEAD/DEAH box helicase 27 193 6.4E-47 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JV59_18775 38cc89095920c271921e08cc2609bab7 458 Gene3D G3DSA:3.30.70.330 385 458 2.0E-19 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily JV59_18775 38cc89095920c271921e08cc2609bab7 458 SMART SM00487 22 219 3.7E-60 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JV59_18775 38cc89095920c271921e08cc2609bab7 458 SUPERFAMILY SSF52540 72 354 2.39E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_18775 38cc89095920c271921e08cc2609bab7 458 Pfam PF00271 Helicase conserved C-terminal domain 230 337 4.8E-28 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_18775 38cc89095920c271921e08cc2609bab7 458 Pfam PF03880 DbpA RNA binding domain 385 455 8.3E-22 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain JV59_18775 38cc89095920c271921e08cc2609bab7 458 SMART SM00490 256 337 5.5E-30 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_18775 38cc89095920c271921e08cc2609bab7 458 Gene3D G3DSA:3.40.50.300 3 209 6.4E-74 T 14-10-2018 JV59_01870 0a580f365579830299028c569d542ce7 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 4.4E-23 T 14-10-2018 JV59_01870 0a580f365579830299028c569d542ce7 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 4.4E-23 T 14-10-2018 JV59_01870 0a580f365579830299028c569d542ce7 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 4.4E-23 T 14-10-2018 JV59_01870 0a580f365579830299028c569d542ce7 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 4.4E-23 T 14-10-2018 JV59_01870 0a580f365579830299028c569d542ce7 489 Gene3D G3DSA:3.50.50.60 252 406 1.2E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_01870 0a580f365579830299028c569d542ce7 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 459 1.4E-25 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JV59_01870 0a580f365579830299028c569d542ce7 489 SUPERFAMILY SSF46548 2 155 3.4E-36 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JV59_01870 0a580f365579830299028c569d542ce7 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 38 131 2.9E-24 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 JV59_01870 0a580f365579830299028c569d542ce7 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 1.0E-199 T 14-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 JV59_01870 0a580f365579830299028c569d542ce7 489 Gene3D G3DSA:1.10.1060.10 10 143 4.2E-24 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JV59_01870 0a580f365579830299028c569d542ce7 489 Gene3D G3DSA:3.40.50.720 144 251 2.5E-15 T 14-10-2018 JV59_01870 0a580f365579830299028c569d542ce7 489 SUPERFAMILY SSF51971 143 407 3.47E-65 T 14-10-2018 JV59_32080 fb03ce5a1b6b7f87afc9b2a1384ee490 404 Gene3D G3DSA:3.40.50.2300 40 348 5.2E-33 T 14-10-2018 JV59_32080 fb03ce5a1b6b7f87afc9b2a1384ee490 404 Gene3D G3DSA:3.40.50.2300 144 280 5.2E-33 T 14-10-2018 JV59_32080 fb03ce5a1b6b7f87afc9b2a1384ee490 404 SUPERFAMILY SSF53822 41 361 2.49E-31 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_32080 fb03ce5a1b6b7f87afc9b2a1384ee490 404 Pfam PF13458 Periplasmic binding protein 31 362 7.6E-16 T 14-10-2018 IPR028081 Leucine-binding protein domain JV59_37460 f93d22cf8efb5efc041c2005f7d40f13 323 Pfam PF01699 Sodium/calcium exchanger protein 5 143 3.5E-26 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 JV59_37460 f93d22cf8efb5efc041c2005f7d40f13 323 Pfam PF01699 Sodium/calcium exchanger protein 177 317 1.8E-27 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 JV59_37460 f93d22cf8efb5efc041c2005f7d40f13 323 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 4 313 1.0E-80 T 14-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 JV59_37460 f93d22cf8efb5efc041c2005f7d40f13 323 Gene3D G3DSA:1.20.58.1130 9 208 7.2E-86 T 14-10-2018 JV59_37460 f93d22cf8efb5efc041c2005f7d40f13 323 Gene3D G3DSA:1.20.1420.30 35 311 7.2E-86 T 14-10-2018 JV59_35720 bfe28a667d5e1f3fcf968f8e7cbbbdc2 381 Pfam PF00684 DnaJ central domain 149 209 2.9E-15 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 JV59_35720 bfe28a667d5e1f3fcf968f8e7cbbbdc2 381 SUPERFAMILY SSF57938 136 212 2.75E-23 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily JV59_35720 bfe28a667d5e1f3fcf968f8e7cbbbdc2 381 SUPERFAMILY SSF49493 261 346 7.98E-23 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 JV59_35720 bfe28a667d5e1f3fcf968f8e7cbbbdc2 381 Pfam PF00226 DnaJ domain 5 67 1.1E-26 T 14-10-2018 IPR001623 DnaJ domain JV59_35720 bfe28a667d5e1f3fcf968f8e7cbbbdc2 381 SUPERFAMILY SSF49493 116 264 2.49E-19 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 JV59_35720 bfe28a667d5e1f3fcf968f8e7cbbbdc2 381 Gene3D G3DSA:1.10.287.110 1 113 2.2E-36 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JV59_35720 bfe28a667d5e1f3fcf968f8e7cbbbdc2 381 Gene3D G3DSA:2.10.230.10 148 211 6.9E-22 T 14-10-2018 JV59_35720 bfe28a667d5e1f3fcf968f8e7cbbbdc2 381 SUPERFAMILY SSF46565 1 110 1.19E-35 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JV59_35720 bfe28a667d5e1f3fcf968f8e7cbbbdc2 381 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 6.7E-141 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 JV59_35720 bfe28a667d5e1f3fcf968f8e7cbbbdc2 381 Pfam PF01556 DnaJ C terminal domain 123 335 1.2E-45 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal JV59_35720 bfe28a667d5e1f3fcf968f8e7cbbbdc2 381 PRINTS PR00625 DnaJ domain signature 25 40 2.9E-32 T 14-10-2018 IPR001623 DnaJ domain JV59_35720 bfe28a667d5e1f3fcf968f8e7cbbbdc2 381 PRINTS PR00625 DnaJ domain signature 42 62 2.9E-32 T 14-10-2018 IPR001623 DnaJ domain JV59_35720 bfe28a667d5e1f3fcf968f8e7cbbbdc2 381 PRINTS PR00625 DnaJ domain signature 62 81 2.9E-32 T 14-10-2018 IPR001623 DnaJ domain JV59_35720 bfe28a667d5e1f3fcf968f8e7cbbbdc2 381 PRINTS PR00625 DnaJ domain signature 7 25 2.9E-32 T 14-10-2018 IPR001623 DnaJ domain JV59_35720 bfe28a667d5e1f3fcf968f8e7cbbbdc2 381 Gene3D G3DSA:2.60.260.20 257 365 1.0E-28 T 14-10-2018 JV59_35720 bfe28a667d5e1f3fcf968f8e7cbbbdc2 381 SMART SM00271 4 62 7.8E-31 T 14-10-2018 IPR001623 DnaJ domain JV59_35720 bfe28a667d5e1f3fcf968f8e7cbbbdc2 381 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 14-10-2018 IPR018253 DnaJ domain, conserved site JV59_35720 bfe28a667d5e1f3fcf968f8e7cbbbdc2 381 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 375 42.842 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 JV59_28005 f6fcc0707e24eb30b1aefe6cbb9d7a7e 163 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 130 5.4E-23 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 JV59_28005 f6fcc0707e24eb30b1aefe6cbb9d7a7e 163 SUPERFAMILY SSF55083 1 154 2.09E-40 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 JV59_28005 f6fcc0707e24eb30b1aefe6cbb9d7a7e 163 Gene3D G3DSA:3.30.70.560 1 155 3.0E-32 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 JV59_28005 f6fcc0707e24eb30b1aefe6cbb9d7a7e 163 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 130 2.8E-23 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 JV59_28005 f6fcc0707e24eb30b1aefe6cbb9d7a7e 163 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 85 96 - T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 JV59_29255 fd4cb1d8298f75b67862bcdd706fd890 796 SUPERFAMILY SSF82866 158 383 3.79E-32 T 14-10-2018 JV59_29255 fd4cb1d8298f75b67862bcdd706fd890 796 PRINTS PR00702 Acriflavin resistance protein family signature 666 690 1.0E-4 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29255 fd4cb1d8298f75b67862bcdd706fd890 796 PRINTS PR00702 Acriflavin resistance protein family signature 250 274 1.0E-4 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29255 fd4cb1d8298f75b67862bcdd706fd890 796 PRINTS PR00702 Acriflavin resistance protein family signature 611 634 1.0E-4 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29255 fd4cb1d8298f75b67862bcdd706fd890 796 PRINTS PR00702 Acriflavin resistance protein family signature 741 764 1.0E-4 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29255 fd4cb1d8298f75b67862bcdd706fd890 796 Gene3D G3DSA:1.20.1640.10 198 399 1.7E-12 T 14-10-2018 JV59_29255 fd4cb1d8298f75b67862bcdd706fd890 796 SUPERFAMILY SSF82866 568 768 3.4E-32 T 14-10-2018 JV59_29255 fd4cb1d8298f75b67862bcdd706fd890 796 Gene3D G3DSA:1.20.1640.10 591 780 3.0E-16 T 14-10-2018 JV59_29255 fd4cb1d8298f75b67862bcdd706fd890 796 Pfam PF03176 MMPL family 111 385 5.2E-21 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JV59_29255 fd4cb1d8298f75b67862bcdd706fd890 796 Pfam PF03176 MMPL family 561 766 4.8E-15 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JV59_26185 59cd37d676ec10ea018e6d4b732323ec 235 Pfam PF00005 ABC transporter 31 181 1.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_26185 59cd37d676ec10ea018e6d4b732323ec 235 SUPERFAMILY SSF52540 7 226 1.22E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_26185 59cd37d676ec10ea018e6d4b732323ec 235 SMART SM00382 36 229 1.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_26185 59cd37d676ec10ea018e6d4b732323ec 235 Gene3D G3DSA:3.40.50.300 7 233 5.8E-55 T 14-10-2018 JV59_25350 689b20b2d7f3bca5617227ab40ffd7c4 602 Pfam PF01935 Domain of unknown function DUF87 129 266 5.9E-17 T 14-10-2018 IPR002789 Helicase HerA, central domain JV59_25350 689b20b2d7f3bca5617227ab40ffd7c4 602 SUPERFAMILY SSF52540 125 581 2.2E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_25350 689b20b2d7f3bca5617227ab40ffd7c4 602 Gene3D G3DSA:3.40.50.300 112 274 2.9E-22 T 14-10-2018 JV59_25350 689b20b2d7f3bca5617227ab40ffd7c4 602 Gene3D G3DSA:3.40.50.300 370 590 1.7E-42 T 14-10-2018 JV59_30000 84aff76bc8940c3d337a152ab9fa735e 351 Gene3D G3DSA:2.40.30.170 237 351 2.5E-39 T 14-10-2018 JV59_30000 84aff76bc8940c3d337a152ab9fa735e 351 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 53 297 1.6E-22 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JV59_30000 84aff76bc8940c3d337a152ab9fa735e 351 Gene3D G3DSA:1.10.287.470 121 189 1.5E-8 T 14-10-2018 JV59_30000 84aff76bc8940c3d337a152ab9fa735e 351 SUPERFAMILY SSF111369 53 138 5.49E-13 T 14-10-2018 JV59_30000 84aff76bc8940c3d337a152ab9fa735e 351 Gene3D G3DSA:2.40.50.100 54 120 2.9E-13 T 14-10-2018 JV59_30000 84aff76bc8940c3d337a152ab9fa735e 351 Pfam PF00529 HlyD membrane-fusion protein of T1SS 31 348 1.4E-9 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 JV59_30000 84aff76bc8940c3d337a152ab9fa735e 351 SUPERFAMILY SSF111369 117 296 1.11E-16 T 14-10-2018 JV59_33585 4ed1d4e763f4792827a836d67e8be143 829 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 132 243 5.5E-10 T 14-10-2018 IPR000014 PAS domain JV59_33585 4ed1d4e763f4792827a836d67e8be143 829 Gene3D G3DSA:3.10.580.10 671 817 2.9E-8 T 14-10-2018 JV59_33585 4ed1d4e763f4792827a836d67e8be143 829 SMART SM00052 419 666 1.6E-54 T 14-10-2018 IPR001633 EAL domain JV59_33585 4ed1d4e763f4792827a836d67e8be143 829 Pfam PF00563 EAL domain 426 661 9.4E-57 T 14-10-2018 IPR001633 EAL domain JV59_33585 4ed1d4e763f4792827a836d67e8be143 829 Gene3D G3DSA:3.30.450.20 129 273 2.5E-17 T 14-10-2018 JV59_33585 4ed1d4e763f4792827a836d67e8be143 829 SUPERFAMILY SSF55785 132 241 1.17E-14 T 14-10-2018 IPR035965 PAS domain superfamily JV59_33585 4ed1d4e763f4792827a836d67e8be143 829 Gene3D G3DSA:3.20.20.450 406 669 2.4E-67 T 14-10-2018 IPR035919 EAL domain superfamily JV59_33585 4ed1d4e763f4792827a836d67e8be143 829 SUPERFAMILY SSF141868 425 669 1.83E-64 T 14-10-2018 IPR035919 EAL domain superfamily JV59_33585 4ed1d4e763f4792827a836d67e8be143 829 SUPERFAMILY SSF54631 690 819 5.09E-11 T 14-10-2018 JV59_33585 4ed1d4e763f4792827a836d67e8be143 829 Pfam PF13426 PAS domain 142 242 4.7E-6 T 14-10-2018 IPR000014 PAS domain JV59_18275 e46f0c3d384f0f60879a5350d76cdeff 286 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 283 8.2E-95 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 JV59_18275 e46f0c3d384f0f60879a5350d76cdeff 286 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 283 45.043 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 JV59_18275 e46f0c3d384f0f60879a5350d76cdeff 286 SUPERFAMILY SSF55021 2 86 2.75E-10 T 14-10-2018 JV59_18275 e46f0c3d384f0f60879a5350d76cdeff 286 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 89 111 3.9E-47 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 JV59_18275 e46f0c3d384f0f60879a5350d76cdeff 286 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 3.9E-47 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 JV59_18275 e46f0c3d384f0f60879a5350d76cdeff 286 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 3.9E-47 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 JV59_18275 e46f0c3d384f0f60879a5350d76cdeff 286 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 111 138 3.9E-47 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 JV59_18275 e46f0c3d384f0f60879a5350d76cdeff 286 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 235 257 3.9E-47 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 JV59_18275 e46f0c3d384f0f60879a5350d76cdeff 286 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 257 282 3.9E-47 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 JV59_18275 e46f0c3d384f0f60879a5350d76cdeff 286 SUPERFAMILY SSF53328 89 285 3.66E-60 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JV59_18275 e46f0c3d384f0f60879a5350d76cdeff 286 Gene3D G3DSA:3.40.50.170 88 283 2.1E-71 T 14-10-2018 JV59_18275 e46f0c3d384f0f60879a5350d76cdeff 286 Gene3D G3DSA:3.30.70.260 1 87 3.6E-22 T 14-10-2018 JV59_18275 e46f0c3d384f0f60879a5350d76cdeff 286 PIRSF PIRSF036480 1 284 3.9E-106 T 14-10-2018 JV59_18275 e46f0c3d384f0f60879a5350d76cdeff 286 Pfam PF00551 Formyl transferase 89 264 5.9E-38 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JV59_17410 1cec219609467f020042afc1cc58ada0 176 TIGRFAM TIGR04110 heme_HutZ: heme utilization protein HutZ 4 171 7.5E-91 T 14-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain JV59_17410 1cec219609467f020042afc1cc58ada0 176 PIRSF PIRSF004633 1 176 6.4E-80 T 14-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain JV59_17410 1cec219609467f020042afc1cc58ada0 176 Gene3D G3DSA:2.30.110.10 12 176 3.0E-56 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JV59_17410 1cec219609467f020042afc1cc58ada0 176 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 15 105 8.9E-18 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JV59_17410 1cec219609467f020042afc1cc58ada0 176 SUPERFAMILY SSF50475 12 162 1.05E-35 T 14-10-2018 JV59_17820 8155933aaa3a7e8ffe737cf2d95ca271 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 281 1.2E-25 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 JV59_17820 8155933aaa3a7e8ffe737cf2d95ca271 297 Gene3D G3DSA:1.20.1510.10 9 214 2.6E-19 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily JV59_17820 8155933aaa3a7e8ffe737cf2d95ca271 297 SUPERFAMILY SSF161111 9 214 1.96E-32 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily JV59_17820 8155933aaa3a7e8ffe737cf2d95ca271 297 Pfam PF01545 Cation efflux family 13 214 4.6E-32 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 JV59_27605 9948800e2e22c89781f91396f8b3d59e 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 JV59_27605 9948800e2e22c89781f91396f8b3d59e 138 Gene3D G3DSA:3.10.180.10 3 135 3.3E-50 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_27605 9948800e2e22c89781f91396f8b3d59e 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 4.6E-25 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JV59_27605 9948800e2e22c89781f91396f8b3d59e 138 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 5 136 1.7E-68 T 14-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 JV59_27605 9948800e2e22c89781f91396f8b3d59e 138 SUPERFAMILY SSF54593 3 130 6.98E-36 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_21410 0ad071a4d1cc709f85445db29a1c1b79 272 Gene3D G3DSA:3.40.190.10 119 217 1.3E-14 T 14-10-2018 JV59_21410 0ad071a4d1cc709f85445db29a1c1b79 272 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 255 2.6E-9 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_21410 0ad071a4d1cc709f85445db29a1c1b79 272 Gene3D G3DSA:3.40.190.10 37 253 1.3E-14 T 14-10-2018 JV59_21410 0ad071a4d1cc709f85445db29a1c1b79 272 SUPERFAMILY SSF53850 32 255 2.47E-20 T 14-10-2018 JV59_21385 11a0886eafcdf384ba4c077bf16c5de1 566 SUPERFAMILY SSF53850 120 564 7.42E-54 T 14-10-2018 JV59_21385 11a0886eafcdf384ba4c077bf16c5de1 566 Gene3D G3DSA:3.10.105.10 415 542 1.3E-7 T 14-10-2018 JV59_21385 11a0886eafcdf384ba4c077bf16c5de1 566 Pfam PF12793 Sugar transport-related sRNA regulator N-term 22 101 1.0E-15 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain JV59_21385 11a0886eafcdf384ba4c077bf16c5de1 566 Gene3D G3DSA:3.40.190.10 110 309 5.8E-27 T 14-10-2018 JV59_21385 11a0886eafcdf384ba4c077bf16c5de1 566 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 163 308 5.9E-19 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain JV59_20405 f7f05d7ffe0b0f1e0b44e72992fc85ae 315 Gene3D G3DSA:2.120.10.30 76 315 4.2E-15 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like JV59_20405 f7f05d7ffe0b0f1e0b44e72992fc85ae 315 SUPERFAMILY SSF50969 18 300 1.18E-11 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like JV59_26945 55ef06ac9d482c2311fc6ce72c131c8d 252 Gene3D G3DSA:3.60.15.10 1 252 2.7E-93 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JV59_26945 55ef06ac9d482c2311fc6ce72c131c8d 252 Pfam PF00753 Metallo-beta-lactamase superfamily 14 166 3.5E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase JV59_26945 55ef06ac9d482c2311fc6ce72c131c8d 252 PIRSF PIRSF005457 1 252 1.8E-98 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 JV59_26945 55ef06ac9d482c2311fc6ce72c131c8d 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 9.9E-28 T 14-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 JV59_26945 55ef06ac9d482c2311fc6ce72c131c8d 252 SUPERFAMILY SSF56281 3 252 9.04E-69 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JV59_26945 55ef06ac9d482c2311fc6ce72c131c8d 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 44.77 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 JV59_26945 55ef06ac9d482c2311fc6ce72c131c8d 252 SMART SM00849 12 166 3.6E-31 T 14-10-2018 IPR001279 Metallo-beta-lactamase JV59_26945 55ef06ac9d482c2311fc6ce72c131c8d 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 4.1E-104 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 JV59_17500 22a345a3abc054f21aeecb26fe626b3b 407 Gene3D G3DSA:2.40.50.100 70 98 1.5E-13 T 14-10-2018 JV59_17500 22a345a3abc054f21aeecb26fe626b3b 407 SUPERFAMILY SSF111369 196 294 1.57E-6 T 14-10-2018 JV59_17500 22a345a3abc054f21aeecb26fe626b3b 407 Gene3D G3DSA:1.10.287.470 99 160 1.5E-13 T 14-10-2018 JV59_17500 22a345a3abc054f21aeecb26fe626b3b 407 Gene3D G3DSA:2.40.50.100 249 281 4.9E-15 T 14-10-2018 JV59_17500 22a345a3abc054f21aeecb26fe626b3b 407 Gene3D G3DSA:1.10.287.470 182 248 4.9E-15 T 14-10-2018 JV59_17500 22a345a3abc054f21aeecb26fe626b3b 407 SUPERFAMILY SSF111369 71 156 8.11E-10 T 14-10-2018 JV59_17500 22a345a3abc054f21aeecb26fe626b3b 407 Pfam PF13533 Biotin-lipoyl like 70 110 6.5E-11 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain JV59_17500 22a345a3abc054f21aeecb26fe626b3b 407 Gene3D G3DSA:2.40.30.170 282 354 4.9E-15 T 14-10-2018 JV59_19615 3685ea887f4022304a42ca097f49a9d0 1020 Pfam PF00873 AcrB/AcrD/AcrF family 3 1011 3.6E-180 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_19615 3685ea887f4022304a42ca097f49a9d0 1020 Gene3D G3DSA:1.20.1640.10 10 508 7.8E-264 T 14-10-2018 JV59_19615 3685ea887f4022304a42ca097f49a9d0 1020 Gene3D G3DSA:3.30.2090.10 706 796 7.8E-264 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_19615 3685ea887f4022304a42ca097f49a9d0 1020 SUPERFAMILY SSF82714 184 266 1.83E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_19615 3685ea887f4022304a42ca097f49a9d0 1020 SUPERFAMILY SSF82693 41 135 3.31E-18 T 14-10-2018 JV59_19615 3685ea887f4022304a42ca097f49a9d0 1020 SUPERFAMILY SSF82693 136 326 9.68E-24 T 14-10-2018 JV59_19615 3685ea887f4022304a42ca097f49a9d0 1020 SUPERFAMILY SSF82714 712 788 3.66E-11 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_19615 3685ea887f4022304a42ca097f49a9d0 1020 Gene3D G3DSA:3.30.70.1430 556 654 7.8E-264 T 14-10-2018 JV59_19615 3685ea887f4022304a42ca097f49a9d0 1020 Gene3D G3DSA:3.30.70.1440 655 856 7.8E-264 T 14-10-2018 JV59_19615 3685ea887f4022304a42ca097f49a9d0 1020 Gene3D G3DSA:3.30.2090.10 179 270 7.8E-264 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_19615 3685ea887f4022304a42ca097f49a9d0 1020 Gene3D G3DSA:3.30.70.1320 135 328 7.8E-264 T 14-10-2018 JV59_19615 3685ea887f4022304a42ca097f49a9d0 1020 Gene3D G3DSA:1.20.1640.10 509 1008 7.8E-264 T 14-10-2018 JV59_19615 3685ea887f4022304a42ca097f49a9d0 1020 SUPERFAMILY SSF82866 796 1015 2.62E-44 T 14-10-2018 JV59_19615 3685ea887f4022304a42ca097f49a9d0 1020 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 2.5E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_19615 3685ea887f4022304a42ca097f49a9d0 1020 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 2.5E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_19615 3685ea887f4022304a42ca097f49a9d0 1020 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 2.5E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_19615 3685ea887f4022304a42ca097f49a9d0 1020 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 2.5E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_19615 3685ea887f4022304a42ca097f49a9d0 1020 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.5E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_19615 3685ea887f4022304a42ca097f49a9d0 1020 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.5E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_19615 3685ea887f4022304a42ca097f49a9d0 1020 SUPERFAMILY SSF82866 292 491 8.37E-39 T 14-10-2018 JV59_19615 3685ea887f4022304a42ca097f49a9d0 1020 Gene3D G3DSA:3.30.70.1430 40 804 7.8E-264 T 14-10-2018 JV59_38845 435bed997bae68fc72ee0ad0f03537b3 239 Gene3D G3DSA:1.10.10.10 130 239 1.6E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_38845 435bed997bae68fc72ee0ad0f03537b3 239 Pfam PF00072 Response regulator receiver domain 7 117 1.5E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_38845 435bed997bae68fc72ee0ad0f03537b3 239 SMART SM00448 5 116 3.4E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_38845 435bed997bae68fc72ee0ad0f03537b3 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 1.1E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_38845 435bed997bae68fc72ee0ad0f03537b3 239 SUPERFAMILY SSF46894 132 234 1.76E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_38845 435bed997bae68fc72ee0ad0f03537b3 239 SUPERFAMILY SSF52172 3 126 7.83E-42 T 14-10-2018 IPR011006 CheY-like superfamily JV59_38845 435bed997bae68fc72ee0ad0f03537b3 239 Gene3D G3DSA:3.40.50.2300 1 126 3.4E-40 T 14-10-2018 JV59_38845 435bed997bae68fc72ee0ad0f03537b3 239 SMART SM00862 156 232 1.4E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_37175 3897a26225814d53c9c3d0e32b68bb27 172 Gene3D G3DSA:3.30.1360.80 1 172 5.5E-72 T 14-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 JV59_37175 3897a26225814d53c9c3d0e32b68bb27 172 SUPERFAMILY SSF63411 4 162 4.12E-65 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JV59_37175 3897a26225814d53c9c3d0e32b68bb27 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 154 2.0E-75 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 JV59_37175 3897a26225814d53c9c3d0e32b68bb27 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 34.794 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 JV59_37175 3897a26225814d53c9c3d0e32b68bb27 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 8.9E-52 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 JV59_37175 3897a26225814d53c9c3d0e32b68bb27 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 8.9E-52 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 JV59_37175 3897a26225814d53c9c3d0e32b68bb27 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 8.9E-52 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 JV59_37175 3897a26225814d53c9c3d0e32b68bb27 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 8.9E-52 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 JV59_37175 3897a26225814d53c9c3d0e32b68bb27 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 8.9E-52 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 JV59_37175 3897a26225814d53c9c3d0e32b68bb27 172 PIRSF PIRSF006160 1 162 2.0E-66 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 JV59_37175 3897a26225814d53c9c3d0e32b68bb27 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 153 1.7E-60 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 JV59_32040 4e262ce44dfe4ac18fdc661aa3abe564 313 Gene3D G3DSA:3.40.50.880 1 301 3.0E-124 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_32040 4e262ce44dfe4ac18fdc661aa3abe564 313 SUPERFAMILY SSF52317 17 297 2.62E-101 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_32040 4e262ce44dfe4ac18fdc661aa3abe564 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 1.9E-163 T 14-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 JV59_32040 4e262ce44dfe4ac18fdc661aa3abe564 313 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 41.231 T 14-10-2018 IPR033752 MetA family JV59_32040 4e262ce44dfe4ac18fdc661aa3abe564 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.9E-135 T 14-10-2018 IPR033752 MetA family JV59_32040 4e262ce44dfe4ac18fdc661aa3abe564 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 3.0E-127 T 14-10-2018 JV59_32040 4e262ce44dfe4ac18fdc661aa3abe564 313 PIRSF PIRSF000450 1 309 1.6E-147 T 14-10-2018 IPR033752 MetA family JV59_01950 442a0485b449a54cb0762596c0b23422 367 Gene3D G3DSA:3.40.50.300 7 189 2.8E-21 T 14-10-2018 JV59_01950 442a0485b449a54cb0762596c0b23422 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 53.367 T 14-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 JV59_01950 442a0485b449a54cb0762596c0b23422 367 SUPERFAMILY SSF52540 62 180 2.01E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_01950 442a0485b449a54cb0762596c0b23422 367 Pfam PF03969 AFG1-like ATPase 1 364 3.5E-154 T 14-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 JV59_20255 03d94dc5292e7785ffc18fb1aabd385a 482 Gene3D G3DSA:3.40.50.720 1 180 4.8E-56 T 14-10-2018 JV59_20255 03d94dc5292e7785ffc18fb1aabd385a 482 SUPERFAMILY SSF51735 4 174 3.02E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_20255 03d94dc5292e7785ffc18fb1aabd385a 482 SMART SM01350 179 469 1.7E-214 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JV59_20255 03d94dc5292e7785ffc18fb1aabd385a 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 469 1.1E-233 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JV59_20255 03d94dc5292e7785ffc18fb1aabd385a 482 PIRSF PIRSF000109 1 477 4.2E-240 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JV59_20255 03d94dc5292e7785ffc18fb1aabd385a 482 SUPERFAMILY SSF48179 177 472 1.7E-126 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JV59_20255 03d94dc5292e7785ffc18fb1aabd385a 482 Gene3D G3DSA:1.10.1040.10 181 434 1.9E-102 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JV59_20255 03d94dc5292e7785ffc18fb1aabd385a 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 7.8E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JV59_20255 03d94dc5292e7785ffc18fb1aabd385a 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 7.8E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JV59_20255 03d94dc5292e7785ffc18fb1aabd385a 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 7.8E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JV59_20255 03d94dc5292e7785ffc18fb1aabd385a 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 7.8E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JV59_20255 03d94dc5292e7785ffc18fb1aabd385a 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 7.8E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JV59_20255 03d94dc5292e7785ffc18fb1aabd385a 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 7.8E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JV59_20255 03d94dc5292e7785ffc18fb1aabd385a 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 169 9.1E-51 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 JV59_20255 03d94dc5292e7785ffc18fb1aabd385a 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 5.7E-126 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JV59_20255 03d94dc5292e7785ffc18fb1aabd385a 482 Gene3D G3DSA:1.20.5.320 435 482 9.4E-25 T 14-10-2018 JV59_20255 03d94dc5292e7785ffc18fb1aabd385a 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 14-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JV59_19040 29528bbce9d76e0aeb3671b50555353e 123 Pfam PF10719 Late competence development protein ComFB 8 84 1.7E-13 T 14-10-2018 IPR019657 Late competence development protein ComFB JV59_30175 ff1de2fd8c3ee529d0e190719b647c87 219 Gene3D G3DSA:1.10.10.10 122 219 7.5E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_30175 ff1de2fd8c3ee529d0e190719b647c87 219 SUPERFAMILY SSF52172 1 118 6.4E-36 T 14-10-2018 IPR011006 CheY-like superfamily JV59_30175 ff1de2fd8c3ee529d0e190719b647c87 219 SUPERFAMILY SSF46894 119 217 1.67E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_30175 ff1de2fd8c3ee529d0e190719b647c87 219 SMART SM00448 1 112 1.8E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_30175 ff1de2fd8c3ee529d0e190719b647c87 219 Pfam PF00072 Response regulator receiver domain 3 113 8.0E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_30175 ff1de2fd8c3ee529d0e190719b647c87 219 SMART SM00862 145 216 4.2E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_30175 ff1de2fd8c3ee529d0e190719b647c87 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 3.0E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_30175 ff1de2fd8c3ee529d0e190719b647c87 219 Gene3D G3DSA:3.40.50.2300 1 121 1.5E-35 T 14-10-2018 JV59_25095 aba0a6a337acde73b7a14a73f35cfbaf 1685 TIGRFAM TIGR02760 TraI_TIGR: conjugative transfer relaxase protein TraI 1 1592 0.0 T 14-10-2018 IPR014129 Conjugative transfer relaxase protein TraI JV59_25095 aba0a6a337acde73b7a14a73f35cfbaf 1685 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 14 293 8.0E-78 T 14-10-2018 IPR014059 Conjugative relaxase, N-terminal JV59_25095 aba0a6a337acde73b7a14a73f35cfbaf 1685 SUPERFAMILY SSF52540 991 1461 4.91E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_25095 aba0a6a337acde73b7a14a73f35cfbaf 1685 SMART SM00382 1008 1260 7.6E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_25095 aba0a6a337acde73b7a14a73f35cfbaf 1685 SUPERFAMILY SSF55464 1 308 6.87E-70 T 14-10-2018 JV59_25095 aba0a6a337acde73b7a14a73f35cfbaf 1685 Gene3D G3DSA:3.40.50.300 956 1173 4.8E-30 T 14-10-2018 JV59_25095 aba0a6a337acde73b7a14a73f35cfbaf 1685 Pfam PF08751 TrwC relaxase 12 288 3.6E-65 T 14-10-2018 IPR014862 TrwC relaxase JV59_25095 aba0a6a337acde73b7a14a73f35cfbaf 1685 Pfam PF13604 AAA domain 992 1183 1.4E-36 T 14-10-2018 JV59_22175 179a4b724685b2843eaf5d0c15be0f43 326 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 304 320 4.9E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_22175 179a4b724685b2843eaf5d0c15be0f43 326 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 289 304 4.9E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_22175 179a4b724685b2843eaf5d0c15be0f43 326 Pfam PF12833 Helix-turn-helix domain 243 321 4.5E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_22175 179a4b724685b2843eaf5d0c15be0f43 326 Gene3D G3DSA:1.10.10.60 217 326 2.6E-26 T 14-10-2018 JV59_22175 179a4b724685b2843eaf5d0c15be0f43 326 SMART SM00342 237 320 6.3E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_22175 179a4b724685b2843eaf5d0c15be0f43 326 SUPERFAMILY SSF46689 221 268 3.81E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_22175 179a4b724685b2843eaf5d0c15be0f43 326 SUPERFAMILY SSF46689 274 321 2.02E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_25860 5850630b543d777de58d8036e9e2151d 545 SMART SM00388 305 371 5.9E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_25860 5850630b543d777de58d8036e9e2151d 545 SMART SM00387 417 527 2.5E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_25860 5850630b543d777de58d8036e9e2151d 545 Gene3D G3DSA:1.10.287.130 256 372 1.3E-20 T 14-10-2018 JV59_25860 5850630b543d777de58d8036e9e2151d 545 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 418 524 5.0E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_25860 5850630b543d777de58d8036e9e2151d 545 SUPERFAMILY SSF55874 374 530 6.68E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_25860 5850630b543d777de58d8036e9e2151d 545 SUPERFAMILY SSF47384 288 368 1.82E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_25860 5850630b543d777de58d8036e9e2151d 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 505 3.7E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_25860 5850630b543d777de58d8036e9e2151d 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 524 3.7E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_25860 5850630b543d777de58d8036e9e2151d 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 466 3.7E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_25860 5850630b543d777de58d8036e9e2151d 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 480 3.7E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_25860 5850630b543d777de58d8036e9e2151d 545 Gene3D G3DSA:3.30.565.10 381 527 4.9E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_25860 5850630b543d777de58d8036e9e2151d 545 Pfam PF00512 His Kinase A (phospho-acceptor) domain 307 367 2.5E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_25860 5850630b543d777de58d8036e9e2151d 545 SMART SM00304 252 304 2.2E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 PIRSF PIRSF002111 1 534 6.0E-218 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 SMART SM00316 190 260 8.4E-28 T 14-10-2018 IPR022967 RNA-binding domain, S1 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 SMART SM00316 19 87 9.9E-4 T 14-10-2018 IPR022967 RNA-binding domain, S1 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 SMART SM00316 275 347 8.1E-27 T 14-10-2018 IPR022967 RNA-binding domain, S1 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 SMART SM00316 449 520 3.2E-19 T 14-10-2018 IPR022967 RNA-binding domain, S1 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 SMART SM00316 103 171 1.2E-7 T 14-10-2018 IPR022967 RNA-binding domain, S1 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 SMART SM00316 362 434 6.5E-21 T 14-10-2018 IPR022967 RNA-binding domain, S1 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 7.5E-97 T 14-10-2018 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 7.5E-97 T 14-10-2018 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 7.5E-97 T 14-10-2018 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 7.5E-97 T 14-10-2018 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 7.5E-97 T 14-10-2018 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 7.5E-97 T 14-10-2018 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 7.5E-97 T 14-10-2018 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 7.5E-97 T 14-10-2018 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 7.5E-97 T 14-10-2018 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 Gene3D G3DSA:2.40.50.140 6 98 1.1E-16 T 14-10-2018 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 Gene3D G3DSA:2.40.50.140 358 443 3.0E-23 T 14-10-2018 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 Gene3D G3DSA:2.40.50.140 269 357 2.2E-31 T 14-10-2018 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 Pfam PF00575 S1 RNA binding domain 362 434 2.0E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 Pfam PF00575 S1 RNA binding domain 275 347 4.1E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 Pfam PF00575 S1 RNA binding domain 448 520 1.1E-14 T 14-10-2018 IPR003029 S1 domain GO:0003676 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 Pfam PF00575 S1 RNA binding domain 189 260 1.0E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 Pfam PF00575 S1 RNA binding domain 18 86 4.5E-7 T 14-10-2018 IPR003029 S1 domain GO:0003676 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 Pfam PF00575 S1 RNA binding domain 103 171 5.9E-8 T 14-10-2018 IPR003029 S1 domain GO:0003676 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 SUPERFAMILY SSF50249 363 448 7.16E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 SUPERFAMILY SSF50249 4 112 1.03E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 SUPERFAMILY SSF50249 88 174 2.61E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 SUPERFAMILY SSF50249 255 360 6.04E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 SUPERFAMILY SSF50249 190 277 6.64E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 5.8E-230 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 Gene3D G3DSA:2.40.50.140 187 268 6.1E-28 T 14-10-2018 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 SUPERFAMILY SSF50249 429 539 1.79E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 Gene3D G3DSA:2.40.50.140 444 528 3.5E-19 T 14-10-2018 JV59_34700 32813616dfaf21cba8eeb6132f48a3c9 556 Gene3D G3DSA:2.40.50.140 99 178 1.5E-5 T 14-10-2018 JV59_20060 68f3f9d5f477b430c183b5aa7c67c6fd 493 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 235 490 5.7E-65 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 JV59_20060 68f3f9d5f477b430c183b5aa7c67c6fd 493 PIRSF PIRSF017184 5 492 5.8E-135 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 JV59_20060 68f3f9d5f477b430c183b5aa7c67c6fd 493 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 11 210 5.1E-49 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 JV59_20060 68f3f9d5f477b430c183b5aa7c67c6fd 493 Pfam PF01256 Carbohydrate kinase 248 483 3.6E-58 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 JV59_20060 68f3f9d5f477b430c183b5aa7c67c6fd 493 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 430 440 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site JV59_20060 68f3f9d5f477b430c183b5aa7c67c6fd 493 SUPERFAMILY SSF53613 233 490 5.58E-71 T 14-10-2018 IPR029056 Ribokinase-like JV59_20060 68f3f9d5f477b430c183b5aa7c67c6fd 493 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 9 210 23.163 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 JV59_20060 68f3f9d5f477b430c183b5aa7c67c6fd 493 Gene3D G3DSA:3.40.1190.20 228 491 6.4E-81 T 14-10-2018 IPR029056 Ribokinase-like JV59_20060 68f3f9d5f477b430c183b5aa7c67c6fd 493 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 226 491 21.17 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 JV59_20060 68f3f9d5f477b430c183b5aa7c67c6fd 493 Gene3D G3DSA:3.40.50.10260 4 215 6.3E-56 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 JV59_20060 68f3f9d5f477b430c183b5aa7c67c6fd 493 SUPERFAMILY SSF64153 6 246 2.62E-60 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 JV59_20060 68f3f9d5f477b430c183b5aa7c67c6fd 493 Pfam PF03853 YjeF-related protein N-terminus 30 189 5.0E-45 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 JV59_16660 3f329e564c0db83783b64a305e19f6ef 179 Gene3D G3DSA:3.10.640.10 1 179 7.6E-65 T 14-10-2018 IPR038590 YaeQ superfamily JV59_16660 3f329e564c0db83783b64a305e19f6ef 179 Pfam PF07152 YaeQ protein 1 171 1.5E-64 T 14-10-2018 IPR009822 YaeQ JV59_16660 3f329e564c0db83783b64a305e19f6ef 179 SUPERFAMILY SSF52980 2 178 2.39E-64 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JV59_16660 3f329e564c0db83783b64a305e19f6ef 179 PIRSF PIRSF011484 1 179 7.4E-65 T 14-10-2018 IPR009822 YaeQ JV59_16660 3f329e564c0db83783b64a305e19f6ef 179 SMART SM01322 1 174 2.0E-88 T 14-10-2018 IPR009822 YaeQ JV59_25025 e2e44a59b2cc918faab52f5274ec6778 179 SUPERFAMILY SSF50182 100 167 4.9E-12 T 14-10-2018 IPR010920 LSM domain superfamily JV59_25025 e2e44a59b2cc918faab52f5274ec6778 179 Pfam PF00924 Mechanosensitive ion channel 62 164 1.5E-10 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 JV59_38415 c80a84c0ebca9019b1baca883c05b644 548 SUPERFAMILY SSF48592 373 525 1.98E-31 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily JV59_38415 c80a84c0ebca9019b1baca883c05b644 548 Gene3D G3DSA:3.50.7.10 173 379 2.2E-236 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily JV59_38415 c80a84c0ebca9019b1baca883c05b644 548 SUPERFAMILY SSF48592 3 230 1.15E-65 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily JV59_38415 c80a84c0ebca9019b1baca883c05b644 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.417 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JV59_38415 c80a84c0ebca9019b1baca883c05b644 548 Gene3D G3DSA:1.10.560.10 8 521 2.2E-236 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily JV59_38415 c80a84c0ebca9019b1baca883c05b644 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 3.0E-96 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 JV59_38415 c80a84c0ebca9019b1baca883c05b644 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JV59_38415 c80a84c0ebca9019b1baca883c05b644 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JV59_38415 c80a84c0ebca9019b1baca883c05b644 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JV59_38415 c80a84c0ebca9019b1baca883c05b644 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JV59_38415 c80a84c0ebca9019b1baca883c05b644 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JV59_38415 c80a84c0ebca9019b1baca883c05b644 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JV59_38415 c80a84c0ebca9019b1baca883c05b644 548 SUPERFAMILY SSF52029 185 376 1.79E-82 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily JV59_38415 c80a84c0ebca9019b1baca883c05b644 548 Gene3D G3DSA:3.30.260.10 138 410 2.2E-236 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily JV59_38415 c80a84c0ebca9019b1baca883c05b644 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 5.1E-253 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JV59_27205 546a83a7d9fdaae8f9248675483fb32b 116 Gene3D G3DSA:3.30.70.120 1 103 2.3E-14 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JV59_27205 546a83a7d9fdaae8f9248675483fb32b 116 SUPERFAMILY SSF54913 1 102 6.12E-21 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta JV59_27205 546a83a7d9fdaae8f9248675483fb32b 116 SMART SM00938 6 104 5.7E-6 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JV59_27775 59239d29b2c9f3b9ef488421aaeab0d0 696 Gene3D G3DSA:1.10.8.540 502 589 2.0E-12 T 14-10-2018 JV59_27775 59239d29b2c9f3b9ef488421aaeab0d0 696 Gene3D G3DSA:1.10.490.80 592 695 4.9E-10 T 14-10-2018 JV59_27775 59239d29b2c9f3b9ef488421aaeab0d0 696 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 141 164 - T 14-10-2018 IPR025505 FHIPEP conserved site JV59_27775 59239d29b2c9f3b9ef488421aaeab0d0 696 Pfam PF00771 FHIPEP family 25 686 3.7E-241 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JV59_27775 59239d29b2c9f3b9ef488421aaeab0d0 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 155 173 6.2E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JV59_27775 59239d29b2c9f3b9ef488421aaeab0d0 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 236 250 6.2E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JV59_27775 59239d29b2c9f3b9ef488421aaeab0d0 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 136 152 6.2E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JV59_27775 59239d29b2c9f3b9ef488421aaeab0d0 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 32 45 6.2E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JV59_27775 59239d29b2c9f3b9ef488421aaeab0d0 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 185 202 6.2E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JV59_27775 59239d29b2c9f3b9ef488421aaeab0d0 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 69 88 6.2E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JV59_27775 59239d29b2c9f3b9ef488421aaeab0d0 696 Gene3D G3DSA:3.40.30.60 358 501 3.6E-46 T 14-10-2018 JV59_27775 59239d29b2c9f3b9ef488421aaeab0d0 696 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 18 694 5.2E-234 T 14-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 JV59_27775 59239d29b2c9f3b9ef488421aaeab0d0 696 PIRSF PIRSF005419 2 696 1.9E-221 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JV59_37820 8e8c9a354e9228f5ffcd82dfe261996c 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.052 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 JV59_37820 8e8c9a354e9228f5ffcd82dfe261996c 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37820 8e8c9a354e9228f5ffcd82dfe261996c 144 Gene3D G3DSA:3.100.10.10 70 144 3.9E-13 T 14-10-2018 JV59_37820 8e8c9a354e9228f5ffcd82dfe261996c 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 3.1E-31 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P JV59_37820 8e8c9a354e9228f5ffcd82dfe261996c 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 3.1E-50 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37820 8e8c9a354e9228f5ffcd82dfe261996c 144 SUPERFAMILY SSF52080 4 143 1.44E-46 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily JV59_39515 63c21eb21ce0ff247bd9f5097423310b 1048 SUPERFAMILY SSF141868 795 1040 8.37E-71 T 14-10-2018 IPR035919 EAL domain superfamily JV59_39515 63c21eb21ce0ff247bd9f5097423310b 1048 SUPERFAMILY SSF55785 478 602 5.8E-20 T 14-10-2018 IPR035965 PAS domain superfamily JV59_39515 63c21eb21ce0ff247bd9f5097423310b 1048 SUPERFAMILY SSF55073 620 776 1.26E-40 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_39515 63c21eb21ce0ff247bd9f5097423310b 1048 SMART SM00052 788 1035 2.3E-62 T 14-10-2018 IPR001633 EAL domain JV59_39515 63c21eb21ce0ff247bd9f5097423310b 1048 SUPERFAMILY SSF55785 355 479 2.27E-8 T 14-10-2018 IPR035965 PAS domain superfamily JV59_39515 63c21eb21ce0ff247bd9f5097423310b 1048 Pfam PF00990 Diguanylate cyclase, GGDEF domain 615 772 2.6E-34 T 14-10-2018 IPR000160 GGDEF domain JV59_39515 63c21eb21ce0ff247bd9f5097423310b 1048 Gene3D G3DSA:3.30.450.20 495 605 5.3E-19 T 14-10-2018 JV59_39515 63c21eb21ce0ff247bd9f5097423310b 1048 Gene3D G3DSA:3.30.70.270 606 775 7.7E-48 T 14-10-2018 JV59_39515 63c21eb21ce0ff247bd9f5097423310b 1048 SMART SM00091 368 434 0.074 T 14-10-2018 IPR000014 PAS domain JV59_39515 63c21eb21ce0ff247bd9f5097423310b 1048 SMART SM00091 493 559 2.8E-5 T 14-10-2018 IPR000014 PAS domain JV59_39515 63c21eb21ce0ff247bd9f5097423310b 1048 Gene3D G3DSA:3.30.450.20 375 494 4.2E-12 T 14-10-2018 JV59_39515 63c21eb21ce0ff247bd9f5097423310b 1048 Gene3D G3DSA:3.20.20.450 776 1037 2.4E-77 T 14-10-2018 IPR035919 EAL domain superfamily JV59_39515 63c21eb21ce0ff247bd9f5097423310b 1048 Pfam PF13426 PAS domain 383 479 0.013 T 14-10-2018 IPR000014 PAS domain JV59_39515 63c21eb21ce0ff247bd9f5097423310b 1048 Pfam PF13426 PAS domain 505 603 9.0E-12 T 14-10-2018 IPR000014 PAS domain JV59_39515 63c21eb21ce0ff247bd9f5097423310b 1048 SMART SM00267 604 776 1.7E-44 T 14-10-2018 IPR000160 GGDEF domain JV59_39515 63c21eb21ce0ff247bd9f5097423310b 1048 Pfam PF00563 EAL domain 797 1030 3.8E-58 T 14-10-2018 IPR001633 EAL domain JV59_39515 63c21eb21ce0ff247bd9f5097423310b 1048 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 611 774 1.2E-33 T 14-10-2018 IPR000160 GGDEF domain JV59_39515 63c21eb21ce0ff247bd9f5097423310b 1048 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 364 488 1.7E-8 T 14-10-2018 IPR000014 PAS domain JV59_39515 63c21eb21ce0ff247bd9f5097423310b 1048 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 490 611 1.4E-16 T 14-10-2018 IPR000014 PAS domain JV59_39325 f32725998b7608cad6554e7b3a513423 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 14-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39325 f32725998b7608cad6554e7b3a513423 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 4.7E-29 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39325 f32725998b7608cad6554e7b3a513423 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 4.7E-29 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39325 f32725998b7608cad6554e7b3a513423 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 4.7E-29 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39325 f32725998b7608cad6554e7b3a513423 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 4.7E-29 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39325 f32725998b7608cad6554e7b3a513423 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 4.7E-29 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39325 f32725998b7608cad6554e7b3a513423 177 Gene3D G3DSA:1.10.520.20 2 106 3.9E-39 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39325 f32725998b7608cad6554e7b3a513423 177 SUPERFAMILY SSF47928 3 105 9.15E-29 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39325 f32725998b7608cad6554e7b3a513423 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.885 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39325 f32725998b7608cad6554e7b3a513423 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 1.8E-64 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39325 f32725998b7608cad6554e7b3a513423 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 4.1E-54 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_21480 5b9f5f49a4fa8aa5ee730eb71f9520b0 302 Gene3D G3DSA:3.40.190.10 162 266 8.3E-40 T 14-10-2018 JV59_21480 5b9f5f49a4fa8aa5ee730eb71f9520b0 302 Pfam PF03466 LysR substrate binding domain 87 293 3.9E-31 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_21480 5b9f5f49a4fa8aa5ee730eb71f9520b0 302 SUPERFAMILY SSF46785 2 83 3.1E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_21480 5b9f5f49a4fa8aa5ee730eb71f9520b0 302 Gene3D G3DSA:3.40.190.10 91 292 8.3E-40 T 14-10-2018 JV59_21480 5b9f5f49a4fa8aa5ee730eb71f9520b0 302 Gene3D G3DSA:1.10.10.10 3 89 2.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_21480 5b9f5f49a4fa8aa5ee730eb71f9520b0 302 SUPERFAMILY SSF53850 89 298 3.41E-34 T 14-10-2018 JV59_21480 5b9f5f49a4fa8aa5ee730eb71f9520b0 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.8E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_30590 c6c9e73ea0d7cd1a218ad3fb2486e1db 254 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_30590 c6c9e73ea0d7cd1a218ad3fb2486e1db 254 Gene3D G3DSA:3.40.50.300 1 249 1.1E-66 T 14-10-2018 JV59_30590 c6c9e73ea0d7cd1a218ad3fb2486e1db 254 SMART SM00382 26 214 2.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_30590 c6c9e73ea0d7cd1a218ad3fb2486e1db 254 Pfam PF00005 ABC transporter 17 165 1.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_30590 c6c9e73ea0d7cd1a218ad3fb2486e1db 254 SUPERFAMILY SSF52540 2 231 7.31E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_02145 1c8ffd934dbc4e9b75d25b4d1116902e 476 PRINTS PR00175 Sodium/alanine symporter signature 303 321 6.1E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_02145 1c8ffd934dbc4e9b75d25b4d1116902e 476 PRINTS PR00175 Sodium/alanine symporter signature 349 371 6.1E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_02145 1c8ffd934dbc4e9b75d25b4d1116902e 476 PRINTS PR00175 Sodium/alanine symporter signature 178 196 6.1E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_02145 1c8ffd934dbc4e9b75d25b4d1116902e 476 PRINTS PR00175 Sodium/alanine symporter signature 206 225 6.1E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_02145 1c8ffd934dbc4e9b75d25b4d1116902e 476 PRINTS PR00175 Sodium/alanine symporter signature 410 430 6.1E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_02145 1c8ffd934dbc4e9b75d25b4d1116902e 476 PRINTS PR00175 Sodium/alanine symporter signature 87 109 6.1E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_02145 1c8ffd934dbc4e9b75d25b4d1116902e 476 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_02145 1c8ffd934dbc4e9b75d25b4d1116902e 476 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 441 4.3E-163 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_02145 1c8ffd934dbc4e9b75d25b4d1116902e 476 Pfam PF01235 Sodium:alanine symporter family 48 453 1.1E-163 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_27610 060e1e38bdabc3583c46994557e5848f 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.655 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 JV59_27610 060e1e38bdabc3583c46994557e5848f 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 6.2E-18 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 JV59_27610 060e1e38bdabc3583c46994557e5848f 213 SMART SM00478 38 185 3.5E-51 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 JV59_27610 060e1e38bdabc3583c46994557e5848f 213 TIGRFAM TIGR01083 nth: endonuclease III 4 194 4.9E-88 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 JV59_27610 060e1e38bdabc3583c46994557e5848f 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 2.9E-7 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 JV59_27610 060e1e38bdabc3583c46994557e5848f 213 Gene3D G3DSA:1.10.340.30 21 132 8.6E-78 T 14-10-2018 JV59_27610 060e1e38bdabc3583c46994557e5848f 213 SUPERFAMILY SSF48150 2 207 2.67E-71 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 JV59_27610 060e1e38bdabc3583c46994557e5848f 213 PIRSF PIRSF001435 1 211 1.9E-50 T 14-10-2018 JV59_27610 060e1e38bdabc3583c46994557e5848f 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 JV59_27610 060e1e38bdabc3583c46994557e5848f 213 SMART SM00525 186 206 1.8E-5 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 JV59_27610 060e1e38bdabc3583c46994557e5848f 213 Gene3D G3DSA:1.10.1670.10 11 203 8.6E-78 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 JV59_27610 060e1e38bdabc3583c46994557e5848f 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 JV59_27610 060e1e38bdabc3583c46994557e5848f 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 7.7E-5 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 JV59_39620 7ee0211096eef7c60e05b0716c30f447 250 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 1.1E-67 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 JV59_39620 7ee0211096eef7c60e05b0716c30f447 250 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 227 5.2E-76 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 JV59_39620 7ee0211096eef7c60e05b0716c30f447 250 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 240 15.984 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 JV59_39620 7ee0211096eef7c60e05b0716c30f447 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 1.3E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 JV59_39620 7ee0211096eef7c60e05b0716c30f447 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 1.3E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 JV59_39620 7ee0211096eef7c60e05b0716c30f447 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 1.3E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 JV59_39620 7ee0211096eef7c60e05b0716c30f447 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 1.3E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 JV59_39620 7ee0211096eef7c60e05b0716c30f447 250 ProSitePatterns PS01218 TatC family signature. 155 174 - T 14-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site JV59_18385 4bc1cfd86349ce0839d48a1464a32d8e 270 SUPERFAMILY SSF46689 169 217 6.14E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_18385 4bc1cfd86349ce0839d48a1464a32d8e 270 SUPERFAMILY SSF51215 28 151 1.96E-15 T 14-10-2018 IPR037923 Transcription regulator HTH-like JV59_18385 4bc1cfd86349ce0839d48a1464a32d8e 270 Gene3D G3DSA:1.10.10.60 171 225 1.5E-12 T 14-10-2018 JV59_18385 4bc1cfd86349ce0839d48a1464a32d8e 270 Pfam PF12833 Helix-turn-helix domain 189 265 2.5E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_18385 4bc1cfd86349ce0839d48a1464a32d8e 270 Pfam PF02311 AraC-like ligand binding domain 30 149 2.4E-19 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 JV59_18385 4bc1cfd86349ce0839d48a1464a32d8e 270 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 220 261 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JV59_18385 4bc1cfd86349ce0839d48a1464a32d8e 270 SUPERFAMILY SSF46689 220 268 6.16E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_18385 4bc1cfd86349ce0839d48a1464a32d8e 270 Gene3D G3DSA:1.10.10.60 226 269 1.9E-10 T 14-10-2018 JV59_18385 4bc1cfd86349ce0839d48a1464a32d8e 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 234 249 3.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_18385 4bc1cfd86349ce0839d48a1464a32d8e 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 265 3.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_18385 4bc1cfd86349ce0839d48a1464a32d8e 270 SMART SM00342 183 265 2.6E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_37880 8c9b1a56d0823d4725917232d86bfe48 232 SMART SM00322 60 125 7.7E-8 T 14-10-2018 IPR004087 K Homology domain GO:0003676 JV59_37880 8c9b1a56d0823d4725917232d86bfe48 232 SUPERFAMILY SSF54821 108 206 1.44E-40 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37880 8c9b1a56d0823d4725917232d86bfe48 232 SUPERFAMILY SSF54814 2 106 3.4E-36 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 JV59_37880 8c9b1a56d0823d4725917232d86bfe48 232 Pfam PF07650 KH domain 38 111 1.5E-18 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37880 8c9b1a56d0823d4725917232d86bfe48 232 Gene3D G3DSA:3.30.1140.32 108 208 3.9E-45 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37880 8c9b1a56d0823d4725917232d86bfe48 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.833 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 JV59_37880 8c9b1a56d0823d4725917232d86bfe48 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 1.0E-97 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 JV59_37880 8c9b1a56d0823d4725917232d86bfe48 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37880 8c9b1a56d0823d4725917232d86bfe48 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.1E-41 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37880 8c9b1a56d0823d4725917232d86bfe48 232 Gene3D G3DSA:3.30.300.20 17 107 1.1E-28 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JV59_29035 f956cf15c77b860843842bb245b08261 361 Gene3D G3DSA:2.40.420.20 271 351 3.9E-73 T 14-10-2018 JV59_29035 f956cf15c77b860843842bb245b08261 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 353 8.8E-67 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 JV59_29035 f956cf15c77b860843842bb245b08261 361 Pfam PF13533 Biotin-lipoyl like 61 104 1.7E-13 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain JV59_29035 f956cf15c77b860843842bb245b08261 361 Gene3D G3DSA:2.40.30.170 48 269 3.9E-73 T 14-10-2018 JV59_29035 f956cf15c77b860843842bb245b08261 361 SUPERFAMILY SSF111369 49 264 1.06E-28 T 14-10-2018 JV59_29035 f956cf15c77b860843842bb245b08261 361 Gene3D G3DSA:2.40.50.100 57 189 3.9E-73 T 14-10-2018 JV59_29035 f956cf15c77b860843842bb245b08261 361 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 69 89 4.1E-5 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JV59_29035 f956cf15c77b860843842bb245b08261 361 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 345 360 4.1E-5 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JV59_29035 f956cf15c77b860843842bb245b08261 361 Pfam PF13437 HlyD family secretion protein 155 252 8.3E-8 T 14-10-2018 JV59_29035 f956cf15c77b860843842bb245b08261 361 Gene3D G3DSA:1.10.287.470 91 150 3.9E-73 T 14-10-2018 JV59_28330 a2eb2fd89af91e10325fc7775c53de83 240 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 205 1.0E-68 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 JV59_28330 a2eb2fd89af91e10325fc7775c53de83 240 SUPERFAMILY SSF55729 4 231 8.58E-87 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_28330 a2eb2fd89af91e10325fc7775c53de83 240 Gene3D G3DSA:3.40.630.70 64 239 2.6E-62 T 14-10-2018 JV59_28330 a2eb2fd89af91e10325fc7775c53de83 240 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 38 217 4.6E-77 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 JV59_28330 a2eb2fd89af91e10325fc7775c53de83 240 Gene3D G3DSA:2.30.210.20 4 63 1.7E-26 T 14-10-2018 JV59_28330 a2eb2fd89af91e10325fc7775c53de83 240 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 240 89.162 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 JV59_33985 d412047c79152c2b59683acbd65afb9a 323 Gene3D G3DSA:3.40.50.300 1 322 4.0E-98 T 14-10-2018 JV59_33985 d412047c79152c2b59683acbd65afb9a 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 1.0E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JV59_33985 d412047c79152c2b59683acbd65afb9a 323 SUPERFAMILY SSF52540 31 301 9.32E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_33985 d412047c79152c2b59683acbd65afb9a 323 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_33985 d412047c79152c2b59683acbd65afb9a 323 SMART SM00382 32 238 1.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_33985 d412047c79152c2b59683acbd65afb9a 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 6.1E-24 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JV59_33985 d412047c79152c2b59683acbd65afb9a 323 Pfam PF00005 ABC transporter 24 180 4.7E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_06880 37a1cfb81cde30aca52f5e5551f780be 315 Pfam PF00582 Universal stress protein family 178 301 9.0E-15 T 14-10-2018 IPR006016 UspA JV59_06880 37a1cfb81cde30aca52f5e5551f780be 315 Pfam PF00582 Universal stress protein family 4 148 6.0E-16 T 14-10-2018 IPR006016 UspA JV59_06880 37a1cfb81cde30aca52f5e5551f780be 315 Gene3D G3DSA:3.40.50.12370 1 312 2.9E-112 T 14-10-2018 JV59_06880 37a1cfb81cde30aca52f5e5551f780be 315 SUPERFAMILY SSF52402 4 157 3.27E-28 T 14-10-2018 JV59_06880 37a1cfb81cde30aca52f5e5551f780be 315 SUPERFAMILY SSF52402 166 308 3.27E-23 T 14-10-2018 JV59_01460 92987e55f478499996c3e0829b53fee7 250 SUPERFAMILY SSF54423 29 86 3.01E-13 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 JV59_01460 92987e55f478499996c3e0829b53fee7 250 Gene3D G3DSA:3.40.30.10 85 249 5.6E-43 T 14-10-2018 JV59_01460 92987e55f478499996c3e0829b53fee7 250 Gene3D G3DSA:3.10.450.70 29 84 5.3E-17 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 JV59_01460 92987e55f478499996c3e0829b53fee7 250 Pfam PF10411 Disulfide bond isomerase protein N-terminus 30 84 3.2E-14 T 14-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal JV59_01460 92987e55f478499996c3e0829b53fee7 250 Pfam PF13098 Thioredoxin-like domain 116 244 3.0E-26 T 14-10-2018 IPR012336 Thioredoxin-like fold JV59_01460 92987e55f478499996c3e0829b53fee7 250 ProSitePatterns PS00194 Thioredoxin family active site. 123 141 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 JV59_01460 92987e55f478499996c3e0829b53fee7 250 SUPERFAMILY SSF52833 102 246 6.06E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_38610 753eab60437c22272446530c2cff548a 226 Gene3D G3DSA:2.160.10.10 38 222 1.4E-33 T 14-10-2018 JV59_38610 753eab60437c22272446530c2cff548a 226 SUPERFAMILY SSF51161 81 217 1.66E-23 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JV59_33420 0fff3b5a8c997266d957cf2ef0acecba 176 Pfam PF00929 Exonuclease 7 171 4.5E-12 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III JV59_33420 0fff3b5a8c997266d957cf2ef0acecba 176 SMART SM00479 5 176 1.8E-4 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III JV59_33420 0fff3b5a8c997266d957cf2ef0acecba 176 SUPERFAMILY SSF53098 4 175 1.69E-30 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JV59_33420 0fff3b5a8c997266d957cf2ef0acecba 176 Gene3D G3DSA:3.30.420.10 1 176 2.0E-38 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JV59_35815 33866a34deee57a9c5e5e48895ab12c9 546 SUPERFAMILY SSF50182 360 425 6.87E-13 T 14-10-2018 IPR010920 LSM domain superfamily JV59_35815 33866a34deee57a9c5e5e48895ab12c9 546 Pfam PF00924 Mechanosensitive ion channel 328 519 2.2E-41 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 JV59_35815 33866a34deee57a9c5e5e48895ab12c9 546 Gene3D G3DSA:2.30.30.60 376 426 1.2E-11 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily JV59_35815 33866a34deee57a9c5e5e48895ab12c9 546 Gene3D G3DSA:3.30.70.100 427 523 5.8E-14 T 14-10-2018 JV59_35815 33866a34deee57a9c5e5e48895ab12c9 546 SUPERFAMILY SSF82689 427 529 7.85E-15 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 JV59_39265 3b969e69650f5ddbec86e8b36cb38f5c 118 Pfam PF00825 Ribonuclease P 6 112 2.1E-32 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 JV59_39265 3b969e69650f5ddbec86e8b36cb38f5c 118 SUPERFAMILY SSF54211 4 114 2.78E-30 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JV59_39265 3b969e69650f5ddbec86e8b36cb38f5c 118 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 113 4.7E-28 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 JV59_39265 3b969e69650f5ddbec86e8b36cb38f5c 118 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 16 104 5.0E-44 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 JV59_39265 3b969e69650f5ddbec86e8b36cb38f5c 118 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.283 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 JV59_39265 3b969e69650f5ddbec86e8b36cb38f5c 118 Gene3D G3DSA:3.30.230.10 1 118 1.2E-40 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JV59_39265 3b969e69650f5ddbec86e8b36cb38f5c 118 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 14-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 JV59_34095 522592a92c31dc3273047dacaa9c29b7 377 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 256 1.7E-16 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JV59_34095 522592a92c31dc3273047dacaa9c29b7 377 Gene3D G3DSA:2.40.420.20 40 367 8.2E-52 T 14-10-2018 JV59_34095 522592a92c31dc3273047dacaa9c29b7 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 369 7.8E-36 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 JV59_34095 522592a92c31dc3273047dacaa9c29b7 377 Gene3D G3DSA:2.40.50.100 56 216 8.2E-52 T 14-10-2018 JV59_34095 522592a92c31dc3273047dacaa9c29b7 377 Gene3D G3DSA:1.10.287.470 90 176 8.2E-52 T 14-10-2018 JV59_34095 522592a92c31dc3273047dacaa9c29b7 377 Gene3D G3DSA:2.40.30.170 45 307 8.2E-52 T 14-10-2018 JV59_34095 522592a92c31dc3273047dacaa9c29b7 377 SUPERFAMILY SSF111369 49 254 4.18E-15 T 14-10-2018 JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 SMART SM00091 170 236 0.023 T 14-10-2018 IPR000014 PAS domain JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 SMART SM00091 24 93 3.8E-5 T 14-10-2018 IPR000014 PAS domain JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 SMART SM00091 301 369 0.27 T 14-10-2018 IPR000014 PAS domain JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 Gene3D G3DSA:1.20.120.160 978 1092 7.3E-11 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 SMART SM00387 550 670 2.0E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 623 3.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 609 3.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 PRINTS PR00344 Bacterial sensor protein C-terminal signature 630 648 3.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 667 3.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 Gene3D G3DSA:3.40.50.2300 825 953 1.2E-43 T 14-10-2018 JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 Gene3D G3DSA:3.30.450.20 175 299 1.6E-9 T 14-10-2018 JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 Pfam PF00512 His Kinase A (phospho-acceptor) domain 439 503 3.7E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 SUPERFAMILY SSF52172 833 956 8.82E-39 T 14-10-2018 IPR011006 CheY-like superfamily JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 Pfam PF13426 PAS domain 35 139 1.2E-8 T 14-10-2018 IPR000014 PAS domain JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 Pfam PF13426 PAS domain 183 281 4.3E-5 T 14-10-2018 IPR000014 PAS domain JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 Pfam PF00072 Response regulator receiver domain 833 948 6.8E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 SUPERFAMILY SSF55874 492 675 3.14E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 Gene3D G3DSA:3.30.565.10 502 671 7.3E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 SMART SM00388 438 503 1.1E-23 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 SUPERFAMILY SSF55785 311 420 4.54E-15 T 14-10-2018 IPR035965 PAS domain superfamily JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 Gene3D G3DSA:3.30.450.20 25 174 3.3E-17 T 14-10-2018 JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 Gene3D G3DSA:3.30.450.20 300 367 1.6E-16 T 14-10-2018 JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 SUPERFAMILY SSF55785 175 280 6.6E-9 T 14-10-2018 IPR035965 PAS domain superfamily JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 Pfam PF08447 PAS fold 324 403 4.7E-14 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 Gene3D G3DSA:2.10.70.100 372 417 1.4E-8 T 14-10-2018 JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 Gene3D G3DSA:1.10.287.130 418 501 1.3E-25 T 14-10-2018 JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 SUPERFAMILY SSF55785 35 148 2.44E-12 T 14-10-2018 IPR035965 PAS domain superfamily JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 SMART SM00448 831 948 7.0E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 551 668 7.2E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 34 147 1.4E-9 T 14-10-2018 IPR000014 PAS domain JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 174 289 7.8E-8 T 14-10-2018 IPR000014 PAS domain JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 SMART SM00086 375 418 0.011 T 14-10-2018 IPR001610 PAC motif JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 SMART SM00086 101 140 150.0 T 14-10-2018 IPR001610 PAC motif JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 Pfam PF01627 Hpt domain 1006 1073 2.1E-5 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 SUPERFAMILY SSF47384 430 505 4.12E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_17815 8d5bebad1502d926309b3e2ee232f18a 1103 SUPERFAMILY SSF47226 931 1085 3.01E-15 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_38470 4da0ea00fa7015705c9e7fbf4387ca5f 370 Gene3D G3DSA:3.40.50.2000 17 359 2.2E-60 T 14-10-2018 JV59_38470 4da0ea00fa7015705c9e7fbf4387ca5f 370 Gene3D G3DSA:3.40.50.2000 170 349 2.2E-60 T 14-10-2018 JV59_38470 4da0ea00fa7015705c9e7fbf4387ca5f 370 Pfam PF00534 Glycosyl transferases group 1 182 343 8.0E-31 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 JV59_38470 4da0ea00fa7015705c9e7fbf4387ca5f 370 Pfam PF13439 Glycosyltransferase Family 4 17 173 1.5E-16 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 JV59_38470 4da0ea00fa7015705c9e7fbf4387ca5f 370 SUPERFAMILY SSF53756 10 367 1.44E-69 T 14-10-2018 JV59_20055 cf2bb8b92d885c4e2caf22123d1cf001 348 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 8.0E-81 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 JV59_20055 cf2bb8b92d885c4e2caf22123d1cf001 348 PIRSF PIRSF000235 1 348 5.2E-195 T 14-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 JV59_20055 cf2bb8b92d885c4e2caf22123d1cf001 348 SUPERFAMILY SSF51412 6 336 6.54E-100 T 14-10-2018 JV59_20055 cf2bb8b92d885c4e2caf22123d1cf001 348 Gene3D G3DSA:3.20.20.70 1 345 9.9E-119 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_20055 cf2bb8b92d885c4e2caf22123d1cf001 348 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 1.8E-184 T 14-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 JV59_20055 cf2bb8b92d885c4e2caf22123d1cf001 348 SMART SM01240 7 344 6.7E-138 T 14-10-2018 JV59_20055 cf2bb8b92d885c4e2caf22123d1cf001 348 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 JV59_20055 cf2bb8b92d885c4e2caf22123d1cf001 348 Hamap MF_00596 GMP reductase [guaC]. 1 345 49.857 T 14-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 JV59_27535 bec374dbfffa2141862a3778b7858807 188 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 JV59_27535 bec374dbfffa2141862a3778b7858807 188 SUPERFAMILY SSF52218 4 187 2.84E-54 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_27535 bec374dbfffa2141862a3778b7858807 188 Gene3D G3DSA:3.40.50.360 1 188 4.7E-58 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_27535 bec374dbfffa2141862a3778b7858807 188 Pfam PF03358 NADPH-dependent FMN reductase 14 133 6.2E-12 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 JV59_34495 48a6c51cd410d77de39cd11c2d1c4a49 244 Gene3D G3DSA:3.40.50.720 1 244 2.9E-88 T 14-10-2018 JV59_34495 48a6c51cd410d77de39cd11c2d1c4a49 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 215 1.5E-4 T 14-10-2018 JV59_34495 48a6c51cd410d77de39cd11c2d1c4a49 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JV59_34495 48a6c51cd410d77de39cd11c2d1c4a49 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 1.3E-66 T 14-10-2018 JV59_34495 48a6c51cd410d77de39cd11c2d1c4a49 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 1.8E-100 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JV59_34495 48a6c51cd410d77de39cd11c2d1c4a49 244 SUPERFAMILY SSF51735 4 243 7.57E-87 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_34495 48a6c51cd410d77de39cd11c2d1c4a49 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 5.6E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_34495 48a6c51cd410d77de39cd11c2d1c4a49 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 5.6E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_34495 48a6c51cd410d77de39cd11c2d1c4a49 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 5.6E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_34495 48a6c51cd410d77de39cd11c2d1c4a49 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.4E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_34495 48a6c51cd410d77de39cd11c2d1c4a49 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.4E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_34495 48a6c51cd410d77de39cd11c2d1c4a49 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.4E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_34495 48a6c51cd410d77de39cd11c2d1c4a49 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.4E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_34495 48a6c51cd410d77de39cd11c2d1c4a49 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.4E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_34495 48a6c51cd410d77de39cd11c2d1c4a49 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.4E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 SUPERFAMILY SSF53901 7 435 2.83E-76 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 SUPERFAMILY SSF47336 1758 1831 1.16E-16 T 14-10-2018 IPR036736 ACP-like superfamily JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 SMART SM00825 Beta-ketoacyl synthase 12 438 5.0E-154 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 Gene3D G3DSA:3.30.70.3290 452 863 4.9E-148 T 14-10-2018 JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 Gene3D G3DSA:3.10.129.110 1399 1677 2.3E-30 T 14-10-2018 JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 10 259 2.0E-64 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 Pfam PF00698 Acyl transferase domain 529 823 5.7E-48 T 14-10-2018 IPR014043 Acyl transferase JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1790 1805 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 SUPERFAMILY SSF52151 528 820 1.26E-69 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 SUPERFAMILY SSF51735 908 1146 4.94E-23 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 Gene3D G3DSA:3.40.47.10 6 438 1.4E-144 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1170 1364 9.2E-34 T 14-10-2018 JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 Gene3D G3DSA:3.40.366.10 527 832 4.9E-148 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 SMART SM00823 Phosphopantetheine attachment site 1766 1835 0.0055 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 SUPERFAMILY SSF55048 656 718 2.62E-9 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 Pfam PF00550 Phosphopantetheine attachment site 1768 1831 1.6E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 Gene3D G3DSA:1.10.1200.10 1754 1835 3.0E-21 T 14-10-2018 IPR036736 ACP-like superfamily JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 267 385 1.2E-35 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 531 831 2.0E-107 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 Gene3D G3DSA:3.40.50.720 880 1398 3.3E-83 T 14-10-2018 JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 SUPERFAMILY SSF51735 1167 1372 2.19E-25 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 172 188 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 Pfam PF14765 Polyketide synthase dehydratase 1397 1671 4.1E-24 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 Gene3D G3DSA:3.30.70.250 657 718 4.9E-148 T 14-10-2018 JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 388 491 7.1E-15 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JV59_16860 cf49168d6b3044d109add88c16bf262f 1842 Pfam PF08659 KR domain 1170 1362 2.6E-41 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JV59_35325 42a4e38a942186a60feed086709799e9 476 Gene3D G3DSA:1.10.1130.10 40 470 4.3E-188 T 14-10-2018 JV59_35325 42a4e38a942186a60feed086709799e9 476 Gene3D G3DSA:1.20.140.10 309 451 4.3E-188 T 14-10-2018 JV59_35325 42a4e38a942186a60feed086709799e9 476 Hamap MF_01182 Cytochrome c-552 [nrfA]. 3 475 57.886 T 14-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 JV59_35325 42a4e38a942186a60feed086709799e9 476 SUPERFAMILY SSF48695 37 472 7.73E-161 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily JV59_35325 42a4e38a942186a60feed086709799e9 476 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 36 472 6.3E-246 T 14-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 JV59_35325 42a4e38a942186a60feed086709799e9 476 Pfam PF02335 Cytochrome c552 41 470 2.2E-178 T 14-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 JV59_35325 42a4e38a942186a60feed086709799e9 476 PIRSF PIRSF000243 10 476 1.5E-126 T 14-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 JV59_36125 45b6da683b9963f9cfc4d560f36c3a50 309 Pfam PF13407 Periplasmic binding protein domain 23 277 9.7E-45 T 14-10-2018 IPR025997 Periplasmic binding protein JV59_36125 45b6da683b9963f9cfc4d560f36c3a50 309 Gene3D G3DSA:3.40.50.2300 125 258 2.0E-66 T 14-10-2018 JV59_36125 45b6da683b9963f9cfc4d560f36c3a50 309 SUPERFAMILY SSF53822 22 295 4.35E-51 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_36125 45b6da683b9963f9cfc4d560f36c3a50 309 Gene3D G3DSA:3.40.50.2300 23 304 2.0E-66 T 14-10-2018 JV59_20905 59237844099e86b74ab45a0521d0c717 158 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 151 26.001 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JV59_20905 59237844099e86b74ab45a0521d0c717 158 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 2 145 1.0E-31 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JV59_20905 59237844099e86b74ab45a0521d0c717 158 Pfam PF01625 Peptide methionine sulfoxide reductase 3 146 2.2E-42 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JV59_20905 59237844099e86b74ab45a0521d0c717 158 Gene3D G3DSA:3.30.1060.10 1 156 1.7E-40 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JV59_20905 59237844099e86b74ab45a0521d0c717 158 SUPERFAMILY SSF55068 1 149 1.26E-47 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JV59_32985 d4e75c58228d89a4bbf30b38f3fbb364 139 Gene3D G3DSA:3.30.70.3200 1 137 3.9E-37 T 14-10-2018 JV59_32985 d4e75c58228d89a4bbf30b38f3fbb364 139 SUPERFAMILY SSF54975 3 135 1.96E-40 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 JV59_32985 d4e75c58228d89a4bbf30b38f3fbb364 139 SMART SM01034 3 95 5.8E-41 T 14-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 JV59_32985 d4e75c58228d89a4bbf30b38f3fbb364 139 Pfam PF04940 Sensors of blue-light using FAD 3 94 6.4E-31 T 14-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 JV59_27060 65cb2c91f5fc2ec47f0b180ff14c3014 321 Pfam PF04055 Radical SAM superfamily 91 252 1.2E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JV59_27060 65cb2c91f5fc2ec47f0b180ff14c3014 321 SMART SM00729 84 293 8.1E-19 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JV59_27060 65cb2c91f5fc2ec47f0b180ff14c3014 321 PIRSF PIRSF005963 1 319 1.5E-129 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 JV59_27060 65cb2c91f5fc2ec47f0b180ff14c3014 321 Gene3D G3DSA:3.20.20.70 47 293 4.5E-22 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_27060 65cb2c91f5fc2ec47f0b180ff14c3014 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 26 73 2.0E-8 T 14-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 JV59_27060 65cb2c91f5fc2ec47f0b180ff14c3014 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 153.619 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 JV59_27060 65cb2c91f5fc2ec47f0b180ff14c3014 321 SUPERFAMILY SSF102114 52 314 2.62E-65 T 14-10-2018 JV59_27060 65cb2c91f5fc2ec47f0b180ff14c3014 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 319 2.9E-149 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 JV59_34755 de90d87f03f75f5630376770c2bcba6d 77 Gene3D G3DSA:1.10.10.1130 1 77 5.8E-31 T 14-10-2018 JV59_34755 de90d87f03f75f5630376770c2bcba6d 77 Pfam PF10982 Protein of unknown function (DUF2789) 1 75 4.6E-31 T 14-10-2018 IPR021250 Protein of unknown function DUF2789 JV59_17690 db21d40bb165435f2767d280fe391c92 479 SUPERFAMILY SSF103190 99 182 2.28E-11 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JV59_17690 db21d40bb165435f2767d280fe391c92 479 SUPERFAMILY SSF55874 315 477 2.62E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_17690 db21d40bb165435f2767d280fe391c92 479 SUPERFAMILY SSF47384 257 325 1.94E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_17690 db21d40bb165435f2767d280fe391c92 479 Gene3D G3DSA:3.30.565.10 331 478 7.8E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_17690 db21d40bb165435f2767d280fe391c92 479 SMART SM00388 261 326 5.4E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_17690 db21d40bb165435f2767d280fe391c92 479 Pfam PF00512 His Kinase A (phospho-acceptor) domain 264 325 7.7E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_17690 db21d40bb165435f2767d280fe391c92 479 Gene3D G3DSA:3.30.450.20 82 172 3.6E-5 T 14-10-2018 JV59_17690 db21d40bb165435f2767d280fe391c92 479 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 372 477 5.9E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_17690 db21d40bb165435f2767d280fe391c92 479 SMART SM00387 371 479 4.7E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_17690 db21d40bb165435f2767d280fe391c92 479 Gene3D G3DSA:1.10.287.130 257 326 2.6E-14 T 14-10-2018 JV59_27005 68d6a3e19dbad9c63aebbb9eaccc6d06 183 SUPERFAMILY SSF56784 4 181 6.48E-47 T 14-10-2018 IPR036412 HAD-like superfamily JV59_27005 68d6a3e19dbad9c63aebbb9eaccc6d06 183 PIRSF PIRSF004682 1 183 4.5E-62 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 JV59_27005 68d6a3e19dbad9c63aebbb9eaccc6d06 183 Pfam PF13242 HAD-hyrolase-like 107 174 1.0E-10 T 14-10-2018 JV59_27005 68d6a3e19dbad9c63aebbb9eaccc6d06 183 Gene3D G3DSA:3.40.50.1000 2 183 9.2E-60 T 14-10-2018 IPR023214 HAD superfamily JV59_27005 68d6a3e19dbad9c63aebbb9eaccc6d06 183 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 177 3.8E-81 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 JV59_27005 68d6a3e19dbad9c63aebbb9eaccc6d06 183 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 147 1.1E-37 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 JV59_27005 68d6a3e19dbad9c63aebbb9eaccc6d06 183 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 149 6.0E-36 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 JV59_13840 b0cec56fa7ed45ff7e9ed3531e36a2d4 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 4.2E-44 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 JV59_13840 b0cec56fa7ed45ff7e9ed3531e36a2d4 309 SUPERFAMILY SSF53671 4 306 3.54E-102 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JV59_13840 b0cec56fa7ed45ff7e9ed3531e36a2d4 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JV59_13840 b0cec56fa7ed45ff7e9ed3531e36a2d4 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 3.0E-35 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 JV59_13840 b0cec56fa7ed45ff7e9ed3531e36a2d4 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.773 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JV59_13840 b0cec56fa7ed45ff7e9ed3531e36a2d4 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 2.1E-27 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JV59_13840 b0cec56fa7ed45ff7e9ed3531e36a2d4 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 2.1E-27 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JV59_13840 b0cec56fa7ed45ff7e9ed3531e36a2d4 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.1E-27 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JV59_13840 b0cec56fa7ed45ff7e9ed3531e36a2d4 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 2.1E-27 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JV59_13840 b0cec56fa7ed45ff7e9ed3531e36a2d4 309 Gene3D G3DSA:3.40.50.1370 8 304 7.3E-121 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JV59_13840 b0cec56fa7ed45ff7e9ed3531e36a2d4 309 Gene3D G3DSA:3.40.50.1370 135 292 7.3E-121 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JV59_13840 b0cec56fa7ed45ff7e9ed3531e36a2d4 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 3.9E-116 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JV59_13840 b0cec56fa7ed45ff7e9ed3531e36a2d4 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 3.9E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JV59_13840 b0cec56fa7ed45ff7e9ed3531e36a2d4 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 3.9E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JV59_13840 b0cec56fa7ed45ff7e9ed3531e36a2d4 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 3.9E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JV59_13840 b0cec56fa7ed45ff7e9ed3531e36a2d4 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 3.9E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JV59_13840 b0cec56fa7ed45ff7e9ed3531e36a2d4 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 3.9E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JV59_13840 b0cec56fa7ed45ff7e9ed3531e36a2d4 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 3.9E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JV59_01440 be9e8054d9bef403dae5f30207d872f1 295 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 26 294 1.7E-93 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 JV59_01440 be9e8054d9bef403dae5f30207d872f1 295 Gene3D G3DSA:3.20.20.70 138 284 6.4E-124 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_01440 be9e8054d9bef403dae5f30207d872f1 295 Gene3D G3DSA:3.90.1170.20 21 293 6.4E-124 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 JV59_01440 be9e8054d9bef403dae5f30207d872f1 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 2.6E-57 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 JV59_01440 be9e8054d9bef403dae5f30207d872f1 295 SUPERFAMILY SSF54675 14 128 7.46E-32 T 14-10-2018 JV59_01440 be9e8054d9bef403dae5f30207d872f1 295 PIRSF PIRSF006250 16 295 9.9E-100 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 JV59_01440 be9e8054d9bef403dae5f30207d872f1 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 41 127 1.1E-26 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 JV59_01440 be9e8054d9bef403dae5f30207d872f1 295 SUPERFAMILY SSF51690 130 294 2.71E-59 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 JV59_28320 dcb4525c3e58b45274dc0b85d99859d5 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.7E-27 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 JV59_28320 dcb4525c3e58b45274dc0b85d99859d5 72 SMART SM00316 4 72 4.8E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 JV59_28320 dcb4525c3e58b45274dc0b85d99859d5 72 SUPERFAMILY SSF50249 1 70 9.43E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_28320 dcb4525c3e58b45274dc0b85d99859d5 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.5E-38 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 JV59_28320 dcb4525c3e58b45274dc0b85d99859d5 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.238 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 JV59_28320 dcb4525c3e58b45274dc0b85d99859d5 72 Gene3D G3DSA:2.40.50.140 1 72 8.4E-37 T 14-10-2018 JV59_31900 2380878d57ccd3318116381057993411 173 Pfam PF05638 Type VI secretion system effector, Hcp 5 144 5.6E-20 T 14-10-2018 IPR008514 Type VI secretion system effector, Hcp JV59_31900 2380878d57ccd3318116381057993411 173 SUPERFAMILY SSF141452 1 167 1.44E-25 T 14-10-2018 IPR036624 Hcp1-like superfamily JV59_31900 2380878d57ccd3318116381057993411 173 Gene3D G3DSA:2.30.110.20 2 168 5.9E-18 T 14-10-2018 IPR036624 Hcp1-like superfamily JV59_02670 adb221ee154f969cd7a887b836a30bba 559 Pfam PF16657 Maltogenic Amylase, C-terminal domain 480 554 2.1E-6 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal JV59_02670 adb221ee154f969cd7a887b836a30bba 559 SMART SM00642 18 419 5.1E-160 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_02670 adb221ee154f969cd7a887b836a30bba 559 Pfam PF00128 Alpha amylase, catalytic domain 33 376 3.0E-127 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_02670 adb221ee154f969cd7a887b836a30bba 559 SUPERFAMILY SSF51011 480 557 4.0E-16 T 14-10-2018 JV59_02670 adb221ee154f969cd7a887b836a30bba 559 Gene3D G3DSA:2.60.40.1180 481 559 1.9E-15 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta JV59_02670 adb221ee154f969cd7a887b836a30bba 559 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 10 555 8.2E-265 T 14-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 JV59_02670 adb221ee154f969cd7a887b836a30bba 559 Gene3D G3DSA:3.20.20.80 176 480 6.4E-116 T 14-10-2018 JV59_02670 adb221ee154f969cd7a887b836a30bba 559 Gene3D G3DSA:3.90.400.10 112 175 5.2E-30 T 14-10-2018 JV59_02670 adb221ee154f969cd7a887b836a30bba 559 Gene3D G3DSA:3.20.20.80 2 111 1.0E-49 T 14-10-2018 JV59_02670 adb221ee154f969cd7a887b836a30bba 559 SUPERFAMILY SSF51445 9 476 3.36E-162 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_20015 9732eaa83afb4cc8ade0e9efe09ba3a3 566 PIRSF PIRSF000137 1 539 7.0E-146 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 JV59_20015 9732eaa83afb4cc8ade0e9efe09ba3a3 566 Gene3D G3DSA:3.30.410.40 151 471 9.1E-177 T 14-10-2018 JV59_20015 9732eaa83afb4cc8ade0e9efe09ba3a3 566 SUPERFAMILY SSF54373 292 474 6.28E-60 T 14-10-2018 JV59_20015 9732eaa83afb4cc8ade0e9efe09ba3a3 566 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 533 9.1E-241 T 14-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 JV59_20015 9732eaa83afb4cc8ade0e9efe09ba3a3 566 Pfam PF05199 GMC oxidoreductase 388 526 3.4E-39 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 JV59_20015 9732eaa83afb4cc8ade0e9efe09ba3a3 566 Gene3D G3DSA:1.10.1220.110 97 150 9.1E-177 T 14-10-2018 JV59_20015 9732eaa83afb4cc8ade0e9efe09ba3a3 566 Gene3D G3DSA:4.10.450.10 38 198 9.1E-177 T 14-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 JV59_20015 9732eaa83afb4cc8ade0e9efe09ba3a3 566 Gene3D G3DSA:3.50.50.60 5 530 9.1E-177 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_20015 9732eaa83afb4cc8ade0e9efe09ba3a3 566 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 553 61.124 T 14-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 JV59_20015 9732eaa83afb4cc8ade0e9efe09ba3a3 566 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 JV59_20015 9732eaa83afb4cc8ade0e9efe09ba3a3 566 SUPERFAMILY SSF51905 1 533 2.96E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_20015 9732eaa83afb4cc8ade0e9efe09ba3a3 566 Pfam PF00732 GMC oxidoreductase 5 297 1.5E-91 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 JV59_17975 1d141c7befd8d0237bfa2e38f4115d9f 200 Pfam PF06961 Protein of unknown function (DUF1294) 106 156 7.0E-15 T 14-10-2018 IPR010718 Protein of unknown function DUF1294 JV59_17975 1d141c7befd8d0237bfa2e38f4115d9f 200 Pfam PF00313 'Cold-shock' DNA-binding domain 4 66 9.6E-6 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JV59_17975 1d141c7befd8d0237bfa2e38f4115d9f 200 Gene3D G3DSA:2.40.50.140 1 70 7.9E-12 T 14-10-2018 JV59_17975 1d141c7befd8d0237bfa2e38f4115d9f 200 SUPERFAMILY SSF50249 2 66 5.88E-9 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_36740 a21b2c70802110c77fca6fe274035cce 444 Gene3D G3DSA:1.10.10.60 386 440 1.1E-12 T 14-10-2018 JV59_36740 a21b2c70802110c77fca6fe274035cce 444 SMART SM00382 166 303 2.6E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_36740 a21b2c70802110c77fca6fe274035cce 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 6.7E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_36740 a21b2c70802110c77fca6fe274035cce 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 6.7E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_36740 a21b2c70802110c77fca6fe274035cce 444 SUPERFAMILY SSF52540 146 380 6.57E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_36740 a21b2c70802110c77fca6fe274035cce 444 Gene3D G3DSA:1.10.8.60 312 382 2.4E-23 T 14-10-2018 JV59_36740 a21b2c70802110c77fca6fe274035cce 444 SUPERFAMILY SSF46689 352 438 9.86E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_36740 a21b2c70802110c77fca6fe274035cce 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JV59_36740 a21b2c70802110c77fca6fe274035cce 444 Pfam PF02954 Bacterial regulatory protein, Fis family 396 435 1.6E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_36740 a21b2c70802110c77fca6fe274035cce 444 Gene3D G3DSA:3.40.50.300 137 310 8.3E-43 T 14-10-2018 JV59_36740 a21b2c70802110c77fca6fe274035cce 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site JV59_36740 a21b2c70802110c77fca6fe274035cce 444 Pfam PF00158 Sigma-54 interaction domain 146 305 2.2E-40 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JV59_36740 a21b2c70802110c77fca6fe274035cce 444 SUPERFAMILY SSF52172 27 190 3.51E-8 T 14-10-2018 IPR011006 CheY-like superfamily JV59_24830 67454a091172607b5a40fc5960aaabf9 148 PRINTS PR00156 Type I copper blue protein family signature 87 101 1.7E-6 T 14-10-2018 IPR001235 Blue (type 1) copper protein, plastocyanin-type GO:0005507|GO:0009055 JV59_24830 67454a091172607b5a40fc5960aaabf9 148 PRINTS PR00156 Type I copper blue protein family signature 43 56 1.7E-6 T 14-10-2018 IPR001235 Blue (type 1) copper protein, plastocyanin-type GO:0005507|GO:0009055 JV59_24830 67454a091172607b5a40fc5960aaabf9 148 PRINTS PR00155 Amicyanin family signature 37 56 2.0E-21 T 14-10-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 JV59_24830 67454a091172607b5a40fc5960aaabf9 148 PRINTS PR00155 Amicyanin family signature 92 107 2.0E-21 T 14-10-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 JV59_24830 67454a091172607b5a40fc5960aaabf9 148 PRINTS PR00155 Amicyanin family signature 21 36 2.0E-21 T 14-10-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 JV59_24830 67454a091172607b5a40fc5960aaabf9 148 PRINTS PR00155 Amicyanin family signature 76 91 2.0E-21 T 14-10-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 JV59_24830 67454a091172607b5a40fc5960aaabf9 148 SUPERFAMILY SSF49503 22 110 1.33E-23 T 14-10-2018 IPR008972 Cupredoxin JV59_24830 67454a091172607b5a40fc5960aaabf9 148 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 30 109 6.2E-12 T 14-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 JV59_24830 67454a091172607b5a40fc5960aaabf9 148 Gene3D G3DSA:2.60.40.420 20 144 5.2E-30 T 14-10-2018 IPR008972 Cupredoxin JV59_24830 67454a091172607b5a40fc5960aaabf9 148 TIGRFAM TIGR02375 pseudoazurin: pseudoazurin 26 140 9.6E-33 T 14-10-2018 IPR012745 Pseudoazurin GO:0005507 JV59_24830 67454a091172607b5a40fc5960aaabf9 148 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 89 103 - T 14-10-2018 IPR028871 Blue (type 1) copper protein, binding site JV59_39270 8873e067e6a9f80710479010a60190e4 539 Pfam PF02096 60Kd inner membrane protein 350 529 1.7E-62 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JV59_39270 8873e067e6a9f80710479010a60190e4 539 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 349 528 1.3E-73 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_39270 8873e067e6a9f80710479010a60190e4 539 PRINTS PR00701 60kDa inner membrane protein signature 160 180 4.7E-98 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JV59_39270 8873e067e6a9f80710479010a60190e4 539 PRINTS PR00701 60kDa inner membrane protein signature 70 91 4.7E-98 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JV59_39270 8873e067e6a9f80710479010a60190e4 539 PRINTS PR00701 60kDa inner membrane protein signature 248 263 4.7E-98 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JV59_39270 8873e067e6a9f80710479010a60190e4 539 PRINTS PR00701 60kDa inner membrane protein signature 411 434 4.7E-98 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JV59_39270 8873e067e6a9f80710479010a60190e4 539 PRINTS PR00701 60kDa inner membrane protein signature 320 340 4.7E-98 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JV59_39270 8873e067e6a9f80710479010a60190e4 539 PRINTS PR00701 60kDa inner membrane protein signature 458 480 4.7E-98 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JV59_39270 8873e067e6a9f80710479010a60190e4 539 PRINTS PR00701 60kDa inner membrane protein signature 213 231 4.7E-98 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JV59_39270 8873e067e6a9f80710479010a60190e4 539 PRINTS PR00701 60kDa inner membrane protein signature 2 23 4.7E-98 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JV59_39270 8873e067e6a9f80710479010a60190e4 539 PRINTS PR00701 60kDa inner membrane protein signature 495 518 4.7E-98 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JV59_39270 8873e067e6a9f80710479010a60190e4 539 PRINTS PR01900 YidC translocation/secretion protein signature 335 351 1.4E-25 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JV59_39270 8873e067e6a9f80710479010a60190e4 539 PRINTS PR01900 YidC translocation/secretion protein signature 484 508 1.4E-25 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JV59_39270 8873e067e6a9f80710479010a60190e4 539 PRINTS PR01900 YidC translocation/secretion protein signature 464 479 1.4E-25 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JV59_39270 8873e067e6a9f80710479010a60190e4 539 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 531 25.721 T 14-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 JV59_39270 8873e067e6a9f80710479010a60190e4 539 Pfam PF14849 YidC periplasmic domain 64 338 1.3E-82 T 14-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain JV59_39270 8873e067e6a9f80710479010a60190e4 539 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 347 8.3E-112 T 14-10-2018 IPR028053 Membrane insertase YidC, N-terminal JV59_39270 8873e067e6a9f80710479010a60190e4 539 Gene3D G3DSA:2.70.98.90 60 329 4.8E-89 T 14-10-2018 IPR038221 YidC, periplasmic domain superfamily JV59_21740 1184e7244393540119a23a448c323e45 547 SUPERFAMILY SSF58104 239 547 1.44E-70 T 14-10-2018 JV59_21740 1184e7244393540119a23a448c323e45 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 412 441 3.0E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_21740 1184e7244393540119a23a448c323e45 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 87 102 3.0E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_21740 1184e7244393540119a23a448c323e45 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 460 489 3.0E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_21740 1184e7244393540119a23a448c323e45 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 383 410 3.0E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_21740 1184e7244393540119a23a448c323e45 547 Gene3D G3DSA:1.10.287.950 218 547 2.0E-70 T 14-10-2018 JV59_21740 1184e7244393540119a23a448c323e45 547 Pfam PF00672 HAMP domain 220 266 1.7E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_21740 1184e7244393540119a23a448c323e45 547 SMART SM00283 285 546 2.4E-65 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_21740 1184e7244393540119a23a448c323e45 547 SMART SM00304 218 270 3.4E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_21740 1184e7244393540119a23a448c323e45 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 351 512 1.8E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_31755 bde65ebf13989e71a1d6078c08d51207 311 Pfam PF10414 Sirohaem synthase dimerisation region 151 196 5.7E-13 T 14-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 JV59_31755 bde65ebf13989e71a1d6078c08d51207 311 Gene3D G3DSA:1.10.8.210 150 209 5.5E-10 T 14-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 JV59_31755 bde65ebf13989e71a1d6078c08d51207 311 SUPERFAMILY SSF75615 115 199 4.19E-25 T 14-10-2018 JV59_31755 bde65ebf13989e71a1d6078c08d51207 311 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 197 9.4E-61 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 JV59_31755 bde65ebf13989e71a1d6078c08d51207 311 Gene3D G3DSA:3.30.160.110 114 149 1.4E-14 T 14-10-2018 JV59_31755 bde65ebf13989e71a1d6078c08d51207 311 Pfam PF14824 Sirohaem biosynthesis protein central 120 146 2.4E-9 T 14-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 JV59_31755 bde65ebf13989e71a1d6078c08d51207 311 SUPERFAMILY SSF53790 224 288 5.67E-5 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 JV59_31755 bde65ebf13989e71a1d6078c08d51207 311 SUPERFAMILY SSF51735 1 113 4.99E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_31755 bde65ebf13989e71a1d6078c08d51207 311 Gene3D G3DSA:3.40.50.720 1 113 6.5E-33 T 14-10-2018 JV59_31755 bde65ebf13989e71a1d6078c08d51207 311 Pfam PF13241 Putative NAD(P)-binding 6 116 5.0E-30 T 14-10-2018 JV59_31755 bde65ebf13989e71a1d6078c08d51207 311 Gene3D G3DSA:3.40.1010.10 210 307 3.6E-5 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 JV59_19245 5229f2a18cf23baecde1b91f0ee00096 301 SUPERFAMILY SSF53850 90 285 1.55E-38 T 14-10-2018 JV59_19245 5229f2a18cf23baecde1b91f0ee00096 301 Pfam PF03466 LysR substrate binding domain 90 285 1.7E-43 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_19245 5229f2a18cf23baecde1b91f0ee00096 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 5.2E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_19245 5229f2a18cf23baecde1b91f0ee00096 301 Gene3D G3DSA:1.10.10.10 3 89 1.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_19245 5229f2a18cf23baecde1b91f0ee00096 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_19245 5229f2a18cf23baecde1b91f0ee00096 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_19245 5229f2a18cf23baecde1b91f0ee00096 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_19245 5229f2a18cf23baecde1b91f0ee00096 301 SUPERFAMILY SSF46785 2 111 1.95E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_19245 5229f2a18cf23baecde1b91f0ee00096 301 Gene3D G3DSA:3.40.190.290 92 293 1.3E-36 T 14-10-2018 JV59_35235 0a7f7f15046710f051e5c4adb3f6682d 466 SMART SM00382 149 296 4.0E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_35235 0a7f7f15046710f051e5c4adb3f6682d 466 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JV59_35235 0a7f7f15046710f051e5c4adb3f6682d 466 Pfam PF02954 Bacterial regulatory protein, Fis family 417 456 8.2E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_35235 0a7f7f15046710f051e5c4adb3f6682d 466 Gene3D G3DSA:1.10.8.60 301 379 2.0E-30 T 14-10-2018 JV59_35235 0a7f7f15046710f051e5c4adb3f6682d 466 SUPERFAMILY SSF46689 342 457 7.17E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_35235 0a7f7f15046710f051e5c4adb3f6682d 466 Gene3D G3DSA:3.40.50.2300 1 119 3.5E-34 T 14-10-2018 JV59_35235 0a7f7f15046710f051e5c4adb3f6682d 466 SMART SM00448 4 115 2.3E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_35235 0a7f7f15046710f051e5c4adb3f6682d 466 Pfam PF00072 Response regulator receiver domain 6 115 1.0E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_35235 0a7f7f15046710f051e5c4adb3f6682d 466 SUPERFAMILY SSF52540 137 370 6.79E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_35235 0a7f7f15046710f051e5c4adb3f6682d 466 Gene3D G3DSA:1.10.10.60 399 463 1.2E-10 T 14-10-2018 JV59_35235 0a7f7f15046710f051e5c4adb3f6682d 466 Gene3D G3DSA:3.40.50.300 120 300 8.0E-63 T 14-10-2018 JV59_35235 0a7f7f15046710f051e5c4adb3f6682d 466 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site JV59_35235 0a7f7f15046710f051e5c4adb3f6682d 466 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 440 460 4.8E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_35235 0a7f7f15046710f051e5c4adb3f6682d 466 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 423 440 4.8E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_35235 0a7f7f15046710f051e5c4adb3f6682d 466 Pfam PF00158 Sigma-54 interaction domain 134 295 8.0E-65 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JV59_35235 0a7f7f15046710f051e5c4adb3f6682d 466 SUPERFAMILY SSF52172 3 173 4.41E-40 T 14-10-2018 IPR011006 CheY-like superfamily JV59_22880 a0f7d5b0b5e3764e3b098a2e9d0499b0 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 3.0E-36 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JV59_22880 a0f7d5b0b5e3764e3b098a2e9d0499b0 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 33.309 T 14-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JV59_22880 a0f7d5b0b5e3764e3b098a2e9d0499b0 100 Pfam PF00547 Urease, gamma subunit 1 99 8.0E-46 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JV59_22880 a0f7d5b0b5e3764e3b098a2e9d0499b0 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 6.2E-52 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JV59_22880 a0f7d5b0b5e3764e3b098a2e9d0499b0 100 PIRSF PIRSF001223 1 100 2.5E-49 T 14-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JV59_22880 a0f7d5b0b5e3764e3b098a2e9d0499b0 100 SUPERFAMILY SSF54111 1 99 1.57E-44 T 14-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JV59_22880 a0f7d5b0b5e3764e3b098a2e9d0499b0 100 Gene3D G3DSA:3.30.280.10 1 100 3.5E-46 T 14-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JV59_38975 05efb60d69eb08d954d98e45eb8b0fb8 846 SMART SM00052 589 837 6.0E-105 T 14-10-2018 IPR001633 EAL domain JV59_38975 05efb60d69eb08d954d98e45eb8b0fb8 846 Pfam PF00563 EAL domain 596 832 1.6E-72 T 14-10-2018 IPR001633 EAL domain JV59_38975 05efb60d69eb08d954d98e45eb8b0fb8 846 Pfam PF00990 Diguanylate cyclase, GGDEF domain 428 572 1.5E-25 T 14-10-2018 IPR000160 GGDEF domain JV59_38975 05efb60d69eb08d954d98e45eb8b0fb8 846 SMART SM00267 415 579 1.3E-26 T 14-10-2018 IPR000160 GGDEF domain JV59_38975 05efb60d69eb08d954d98e45eb8b0fb8 846 SUPERFAMILY SSF141868 596 843 4.58E-84 T 14-10-2018 IPR035919 EAL domain superfamily JV59_38975 05efb60d69eb08d954d98e45eb8b0fb8 846 Gene3D G3DSA:3.30.450.20 150 218 1.8E-17 T 14-10-2018 JV59_38975 05efb60d69eb08d954d98e45eb8b0fb8 846 Gene3D G3DSA:3.20.20.450 594 845 1.8E-92 T 14-10-2018 IPR035919 EAL domain superfamily JV59_38975 05efb60d69eb08d954d98e45eb8b0fb8 846 SUPERFAMILY SSF158472 368 417 8.11E-6 T 14-10-2018 JV59_38975 05efb60d69eb08d954d98e45eb8b0fb8 846 Pfam PF02743 Cache domain 89 329 7.0E-14 T 14-10-2018 IPR033479 Double Cache domain 1 JV59_38975 05efb60d69eb08d954d98e45eb8b0fb8 846 Gene3D G3DSA:1.10.287.130 365 431 7.7E-5 T 14-10-2018 JV59_38975 05efb60d69eb08d954d98e45eb8b0fb8 846 Gene3D G3DSA:3.30.450.20 219 335 1.8E-17 T 14-10-2018 JV59_38975 05efb60d69eb08d954d98e45eb8b0fb8 846 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 425 573 1.1E-20 T 14-10-2018 IPR000160 GGDEF domain JV59_38975 05efb60d69eb08d954d98e45eb8b0fb8 846 SUPERFAMILY SSF55073 431 572 2.12E-28 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_38975 05efb60d69eb08d954d98e45eb8b0fb8 846 SMART SM00304 367 420 3.7E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_38975 05efb60d69eb08d954d98e45eb8b0fb8 846 Gene3D G3DSA:3.30.70.270 432 593 2.5E-30 T 14-10-2018 JV59_19955 0a46c57ea8cd026a1a99669bf320e07b 786 Gene3D G3DSA:3.40.50.300 245 449 3.0E-56 T 14-10-2018 JV59_19955 0a46c57ea8cd026a1a99669bf320e07b 786 Gene3D G3DSA:3.40.50.300 5 194 1.6E-29 T 14-10-2018 JV59_19955 0a46c57ea8cd026a1a99669bf320e07b 786 Gene3D G3DSA:3.30.230.10 541 768 1.2E-89 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JV59_19955 0a46c57ea8cd026a1a99669bf320e07b 786 Pfam PF13654 AAA domain 25 539 2.2E-185 T 14-10-2018 JV59_19955 0a46c57ea8cd026a1a99669bf320e07b 786 SUPERFAMILY SSF54211 564 756 1.14E-34 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JV59_19955 0a46c57ea8cd026a1a99669bf320e07b 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 724 2.8E-8 T 14-10-2018 JV59_19955 0a46c57ea8cd026a1a99669bf320e07b 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 2.8E-8 T 14-10-2018 JV59_19955 0a46c57ea8cd026a1a99669bf320e07b 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 549 565 2.8E-8 T 14-10-2018 JV59_19955 0a46c57ea8cd026a1a99669bf320e07b 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 646 665 2.8E-8 T 14-10-2018 JV59_19955 0a46c57ea8cd026a1a99669bf320e07b 786 Gene3D G3DSA:1.10.8.60 450 536 2.5E-13 T 14-10-2018 JV59_19955 0a46c57ea8cd026a1a99669bf320e07b 786 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 649 753 1.5E-9 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 JV59_19955 0a46c57ea8cd026a1a99669bf320e07b 786 SUPERFAMILY SSF52540 30 538 4.32E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_31865 c732562283d19f01021d9e685b882d37 298 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 JV59_31865 c732562283d19f01021d9e685b882d37 298 Gene3D G3DSA:3.20.20.60 2 298 1.6E-98 T 14-10-2018 JV59_31865 c732562283d19f01021d9e685b882d37 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 6 295 9.4E-128 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 JV59_31865 c732562283d19f01021d9e685b882d37 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 3 296 50.171 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 JV59_31865 c732562283d19f01021d9e685b882d37 298 SUPERFAMILY SSF51621 4 294 7.63E-95 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JV59_31865 c732562283d19f01021d9e685b882d37 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 9 258 1.8E-44 T 14-10-2018 JV59_36800 6c8400328b3bdc9fd6a3c0bf0f441d85 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 JV59_36800 6c8400328b3bdc9fd6a3c0bf0f441d85 819 Pfam PF00696 Amino acid kinase family 2 284 1.2E-51 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 JV59_36800 6c8400328b3bdc9fd6a3c0bf0f441d85 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 1.8E-132 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JV59_36800 6c8400328b3bdc9fd6a3c0bf0f441d85 819 SUPERFAMILY SSF55021 383 476 4.58E-22 T 14-10-2018 JV59_36800 6c8400328b3bdc9fd6a3c0bf0f441d85 819 Gene3D G3DSA:3.40.1160.10 3 295 2.7E-87 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JV59_36800 6c8400328b3bdc9fd6a3c0bf0f441d85 819 PIRSF PIRSF000727 1 817 0.0 T 14-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JV59_36800 6c8400328b3bdc9fd6a3c0bf0f441d85 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 1.2E-27 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 JV59_36800 6c8400328b3bdc9fd6a3c0bf0f441d85 819 Pfam PF13840 ACT domain 394 456 1.5E-7 T 14-10-2018 IPR027795 CASTOR, ACT domain JV59_36800 6c8400328b3bdc9fd6a3c0bf0f441d85 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JV59_36800 6c8400328b3bdc9fd6a3c0bf0f441d85 819 SUPERFAMILY SSF55021 303 381 2.17E-21 T 14-10-2018 JV59_36800 6c8400328b3bdc9fd6a3c0bf0f441d85 819 Gene3D G3DSA:3.30.360.10 625 795 3.4E-119 T 14-10-2018 JV59_36800 6c8400328b3bdc9fd6a3c0bf0f441d85 819 SUPERFAMILY SSF51735 463 636 8.86E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_36800 6c8400328b3bdc9fd6a3c0bf0f441d85 819 Gene3D G3DSA:3.30.2130.10 302 464 5.3E-45 T 14-10-2018 JV59_36800 6c8400328b3bdc9fd6a3c0bf0f441d85 819 SUPERFAMILY SSF55347 614 797 7.85E-51 T 14-10-2018 JV59_36800 6c8400328b3bdc9fd6a3c0bf0f441d85 819 Pfam PF00742 Homoserine dehydrogenase 614 810 1.4E-46 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 JV59_36800 6c8400328b3bdc9fd6a3c0bf0f441d85 819 SUPERFAMILY SSF53633 1 298 3.94E-78 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JV59_36800 6c8400328b3bdc9fd6a3c0bf0f441d85 819 Gene3D G3DSA:3.40.50.720 467 811 3.4E-119 T 14-10-2018 JV59_36800 6c8400328b3bdc9fd6a3c0bf0f441d85 819 Pfam PF01842 ACT domain 324 374 3.2E-9 T 14-10-2018 IPR002912 ACT domain JV59_36800 6c8400328b3bdc9fd6a3c0bf0f441d85 819 Gene3D G3DSA:1.20.120.1320 41 142 2.7E-87 T 14-10-2018 JV59_39745 0c38185c61a96e75aca0378fb156e3a9 516 Gene3D G3DSA:3.10.105.10 278 493 1.3E-123 T 14-10-2018 JV59_39745 0c38185c61a96e75aca0378fb156e3a9 516 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site JV59_39745 0c38185c61a96e75aca0378fb156e3a9 516 Gene3D G3DSA:3.40.190.10 32 277 1.3E-123 T 14-10-2018 JV59_39745 0c38185c61a96e75aca0378fb156e3a9 516 PIRSF PIRSF002741 20 506 6.2E-96 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 JV59_39745 0c38185c61a96e75aca0378fb156e3a9 516 Gene3D G3DSA:3.90.76.10 57 165 1.3E-123 T 14-10-2018 JV59_39745 0c38185c61a96e75aca0378fb156e3a9 516 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 423 3.4E-87 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain JV59_39745 0c38185c61a96e75aca0378fb156e3a9 516 SUPERFAMILY SSF53850 26 515 2.53E-129 T 14-10-2018 JV59_39465 6a631b61c3728dced05b8aadae5125fa 423 SUPERFAMILY SSF51391 202 404 2.35E-57 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 JV59_39465 6a631b61c3728dced05b8aadae5125fa 423 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 192 406 18.931 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 JV59_39465 6a631b61c3728dced05b8aadae5125fa 423 Pfam PF02581 Thiamine monophosphate synthase 212 388 3.9E-52 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 JV59_39465 6a631b61c3728dced05b8aadae5125fa 423 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 212 399 1.5E-45 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 JV59_39465 6a631b61c3728dced05b8aadae5125fa 423 Gene3D G3DSA:3.20.20.70 196 406 2.7E-53 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_32445 821ae968a05aaa8d61a059f337c5f9ee 400 SMART SM00471 157 293 9.4E-10 T 14-10-2018 IPR003607 HD/PDEase domain JV59_32445 821ae968a05aaa8d61a059f337c5f9ee 400 Pfam PF13487 HD domain 212 274 5.5E-13 T 14-10-2018 JV59_32445 821ae968a05aaa8d61a059f337c5f9ee 400 SUPERFAMILY SSF109604 151 323 7.97E-31 T 14-10-2018 JV59_32445 821ae968a05aaa8d61a059f337c5f9ee 400 Pfam PF11871 Domain of unknown function (DUF3391) 9 128 3.9E-15 T 14-10-2018 IPR021812 Protein of unknown function DUF3391 JV59_32445 821ae968a05aaa8d61a059f337c5f9ee 400 Gene3D G3DSA:1.10.3210.10 11 323 3.1E-68 T 14-10-2018 JV59_16155 f8b458508db911740e18a22bf0433899 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_16155 f8b458508db911740e18a22bf0433899 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_16155 f8b458508db911740e18a22bf0433899 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_16155 f8b458508db911740e18a22bf0433899 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.8E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_16155 f8b458508db911740e18a22bf0433899 293 Gene3D G3DSA:3.40.190.290 93 278 1.1E-39 T 14-10-2018 JV59_16155 f8b458508db911740e18a22bf0433899 293 Gene3D G3DSA:1.10.10.10 1 86 4.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_16155 f8b458508db911740e18a22bf0433899 293 Pfam PF03466 LysR substrate binding domain 89 291 6.3E-21 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_16155 f8b458508db911740e18a22bf0433899 293 SUPERFAMILY SSF46785 3 87 1.2E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_16155 f8b458508db911740e18a22bf0433899 293 SUPERFAMILY SSF53850 91 292 1.49E-30 T 14-10-2018 JV59_19830 fe7f98249d77aacfee0b79136420a676 299 SUPERFAMILY SSF53807 19 287 5.1E-66 T 14-10-2018 JV59_19830 fe7f98249d77aacfee0b79136420a676 299 Gene3D G3DSA:3.40.50.1980 25 278 8.9E-90 T 14-10-2018 JV59_19830 fe7f98249d77aacfee0b79136420a676 299 Gene3D G3DSA:3.40.50.1980 169 272 8.9E-90 T 14-10-2018 JV59_19830 fe7f98249d77aacfee0b79136420a676 299 Pfam PF01497 Periplasmic binding protein 41 274 5.6E-28 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain JV59_33965 345b081f9f05fb76a4c9b9e9b9e04743 714 PIRSF PIRSF006107 1 714 0.0 T 14-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 JV59_33965 345b081f9f05fb76a4c9b9e9b9e04743 714 Gene3D G3DSA:3.40.50.10950 399 709 1.0E-133 T 14-10-2018 JV59_33965 345b081f9f05fb76a4c9b9e9b9e04743 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 5.2E-132 T 14-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 JV59_33965 345b081f9f05fb76a4c9b9e9b9e04743 714 Gene3D G3DSA:3.40.1390.20 225 365 2.0E-13 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily JV59_33965 345b081f9f05fb76a4c9b9e9b9e04743 714 Gene3D G3DSA:3.40.50.300 5 217 3.5E-13 T 14-10-2018 JV59_33965 345b081f9f05fb76a4c9b9e9b9e04743 714 Pfam PF07085 DRTGG domain 233 344 1.5E-27 T 14-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 JV59_33965 345b081f9f05fb76a4c9b9e9b9e04743 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 4.7E-125 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 JV59_33965 345b081f9f05fb76a4c9b9e9b9e04743 714 Gene3D G3DSA:3.40.50.10750 529 682 1.0E-133 T 14-10-2018 JV59_33965 345b081f9f05fb76a4c9b9e9b9e04743 714 SUPERFAMILY SSF53659 392 709 1.07E-95 T 14-10-2018 JV59_33965 345b081f9f05fb76a4c9b9e9b9e04743 714 SUPERFAMILY SSF75138 229 350 6.41E-24 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily JV59_33965 345b081f9f05fb76a4c9b9e9b9e04743 714 Pfam PF13500 AAA domain 3 229 3.8E-50 T 14-10-2018 JV59_33965 345b081f9f05fb76a4c9b9e9b9e04743 714 SUPERFAMILY SSF52540 1 240 2.86E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_26145 1539effaf9fcdbd33599ce1091501a7e 150 Gene3D G3DSA:3.10.430.100 61 149 1.7E-30 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily JV59_26145 1539effaf9fcdbd33599ce1091501a7e 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 2.5E-20 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26145 1539effaf9fcdbd33599ce1091501a7e 150 SUPERFAMILY SSF55658 1 57 1.74E-18 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal JV59_26145 1539effaf9fcdbd33599ce1091501a7e 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26145 1539effaf9fcdbd33599ce1091501a7e 150 SUPERFAMILY SSF55653 60 148 3.53E-25 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily JV59_26145 1539effaf9fcdbd33599ce1091501a7e 150 Gene3D G3DSA:3.40.5.10 1 50 5.1E-23 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26145 1539effaf9fcdbd33599ce1091501a7e 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 4.2E-54 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26145 1539effaf9fcdbd33599ce1091501a7e 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.568 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26145 1539effaf9fcdbd33599ce1091501a7e 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 6.6E-25 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal JV59_37770 dd19335ba9e5fed9e32f00fbc78c9570 189 Pfam PF04225 Opacity-associated protein A LysM-like domain 106 189 2.8E-37 T 14-10-2018 IPR007340 Opacity-associated protein A JV59_37770 dd19335ba9e5fed9e32f00fbc78c9570 189 Gene3D G3DSA:3.10.450.350 93 187 3.0E-14 T 14-10-2018 JV59_37770 dd19335ba9e5fed9e32f00fbc78c9570 189 Pfam PF08525 Opacity-associated protein A N-terminal motif 37 63 2.7E-8 T 14-10-2018 IPR013731 Opacity-associated protein A, N-terminal JV59_27500 e72b69dd8b0da591c1df577586a0cfd3 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 123 3.6E-39 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB JV59_27500 e72b69dd8b0da591c1df577586a0cfd3 127 PIRSF PIRSF005610 1 121 3.3E-20 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB JV59_02025 2473619b75864e84f5742466331f0bd8 576 Pfam PF00905 Penicillin binding protein transpeptidase domain 262 558 4.2E-79 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 JV59_02025 2473619b75864e84f5742466331f0bd8 576 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 21 573 45.088 T 14-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JV59_02025 2473619b75864e84f5742466331f0bd8 576 Gene3D G3DSA:3.30.450.330 238 562 2.7E-107 T 14-10-2018 JV59_02025 2473619b75864e84f5742466331f0bd8 576 SUPERFAMILY SSF56601 189 568 7.96E-94 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JV59_02025 2473619b75864e84f5742466331f0bd8 576 Gene3D G3DSA:3.90.1310.30 61 236 5.9E-43 T 14-10-2018 JV59_02025 2473619b75864e84f5742466331f0bd8 576 Gene3D G3DSA:3.40.710.10 298 480 2.7E-107 T 14-10-2018 JV59_02025 2473619b75864e84f5742466331f0bd8 576 Pfam PF03717 Penicillin-binding Protein dimerisation domain 69 223 6.9E-19 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 JV59_02025 2473619b75864e84f5742466331f0bd8 576 SUPERFAMILY SSF56519 65 236 1.44E-43 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 JV59_32190 5a7176e115243e6b8575e346825316c0 412 SUPERFAMILY SSF56349 106 388 3.53E-35 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JV59_32190 5a7176e115243e6b8575e346825316c0 412 Gene3D G3DSA:1.10.150.130 105 216 1.8E-7 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal JV59_32190 5a7176e115243e6b8575e346825316c0 412 Pfam PF00589 Phage integrase family 240 383 8.5E-15 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JV59_32190 5a7176e115243e6b8575e346825316c0 412 Gene3D G3DSA:1.10.443.10 229 397 2.1E-17 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JV59_30960 9ca58bb4d7bd6b01b1908cad05442c60 191 PIRSF PIRSF029811 1 191 1.7E-51 T 14-10-2018 IPR027016 Uncharacterised protein with YceI domain JV59_30960 9ca58bb4d7bd6b01b1908cad05442c60 191 SUPERFAMILY SSF101874 24 190 4.05E-25 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily JV59_30960 9ca58bb4d7bd6b01b1908cad05442c60 191 Gene3D G3DSA:2.40.128.110 21 191 2.3E-45 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily JV59_30960 9ca58bb4d7bd6b01b1908cad05442c60 191 Pfam PF04264 YceI-like domain 25 188 5.5E-17 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like JV59_30960 9ca58bb4d7bd6b01b1908cad05442c60 191 SMART SM00867 24 189 7.1E-20 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like JV59_33825 4407edba2fe73d33302544321a917007 582 SMART SM00382 368 570 4.9E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_33825 4407edba2fe73d33302544321a917007 582 Gene3D G3DSA:1.20.1560.10 2 328 4.0E-81 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_33825 4407edba2fe73d33302544321a917007 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 581 1.5E-243 T 14-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 JV59_33825 4407edba2fe73d33302544321a917007 582 Pfam PF00005 ABC transporter 359 509 6.4E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_33825 4407edba2fe73d33302544321a917007 582 SUPERFAMILY SSF90123 14 327 1.07E-73 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_33825 4407edba2fe73d33302544321a917007 582 SUPERFAMILY SSF52540 331 580 3.97E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_33825 4407edba2fe73d33302544321a917007 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_33825 4407edba2fe73d33302544321a917007 582 Pfam PF00664 ABC transporter transmembrane region 28 292 6.0E-54 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JV59_33825 4407edba2fe73d33302544321a917007 582 Gene3D G3DSA:3.40.50.300 329 581 1.1E-96 T 14-10-2018 JV59_32740 8174e7fd91c7e4f20210f203653ed9c3 111 Pfam PF08274 PhnA Zinc-Ribbon 3 30 8.0E-14 T 14-10-2018 IPR013987 PhnA protein, N-terminal JV59_32740 8174e7fd91c7e4f20210f203653ed9c3 111 Gene3D G3DSA:2.20.25.10 1 40 7.6E-18 T 14-10-2018 JV59_32740 8174e7fd91c7e4f20210f203653ed9c3 111 SUPERFAMILY SSF57783 2 35 1.02E-13 T 14-10-2018 JV59_32740 8174e7fd91c7e4f20210f203653ed9c3 111 Gene3D G3DSA:2.30.30.40 41 111 1.9E-27 T 14-10-2018 JV59_32740 8174e7fd91c7e4f20210f203653ed9c3 111 Pfam PF03831 PhnA domain 43 111 5.0E-26 T 14-10-2018 IPR013988 PhnA protein, C-terminal JV59_32740 8174e7fd91c7e4f20210f203653ed9c3 111 SUPERFAMILY SSF82057 39 111 1.56E-23 T 14-10-2018 JV59_32740 8174e7fd91c7e4f20210f203653ed9c3 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 3 111 3.3E-40 T 14-10-2018 IPR004624 PhnA protein JV59_27415 48420911e29ccde30eb386c224182e83 377 Gene3D G3DSA:1.10.8.410 330 376 6.3E-20 T 14-10-2018 JV59_27415 48420911e29ccde30eb386c224182e83 377 Gene3D G3DSA:1.20.1330.10 45 170 2.5E-72 T 14-10-2018 JV59_27415 48420911e29ccde30eb386c224182e83 377 Gene3D G3DSA:1.20.1330.10 206 329 4.8E-13 T 14-10-2018 JV59_27415 48420911e29ccde30eb386c224182e83 377 SUPERFAMILY SSF64518 1 376 3.53E-97 T 14-10-2018 JV59_27415 48420911e29ccde30eb386c224182e83 377 Gene3D G3DSA:1.20.58.1830 5 33 2.5E-72 T 14-10-2018 JV59_27415 48420911e29ccde30eb386c224182e83 377 Pfam PF07196 Flagellin hook IN motif 196 249 3.4E-9 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 JV59_27415 48420911e29ccde30eb386c224182e83 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 1.0E-25 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JV59_27415 48420911e29ccde30eb386c224182e83 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 1.0E-42 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JV59_27415 48420911e29ccde30eb386c224182e83 377 PRINTS PR00207 Flagellin signature 37 54 1.9E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JV59_27415 48420911e29ccde30eb386c224182e83 377 PRINTS PR00207 Flagellin signature 111 134 1.9E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JV59_27415 48420911e29ccde30eb386c224182e83 377 PRINTS PR00207 Flagellin signature 76 95 1.9E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 Gene3D G3DSA:1.10.1200.10 1039 1107 6.0E-20 T 14-10-2018 IPR036736 ACP-like superfamily JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 Gene3D G3DSA:3.30.559.10 61 425 3.3E-107 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 Gene3D G3DSA:3.30.559.10 1108 1277 4.8E-41 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 SUPERFAMILY SSF52777 1118 1272 1.78E-32 T 14-10-2018 JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 SUPERFAMILY SSF53474 1545 1805 3.64E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 SMART SM00823 Phosphopantetheine attachment site 1040 1108 0.0065 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 Pfam PF13193 AMP-binding enzyme C-terminal domain 940 1014 1.0E-5 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 535 956 1.3E-120 T 14-10-2018 IPR010071 Amino acid adenylation domain JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 Gene3D G3DSA:3.40.50.1820 1544 1808 4.1E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 SUPERFAMILY SSF52777 1326 1525 3.22E-16 T 14-10-2018 JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 Gene3D G3DSA:3.30.559.30 1291 1530 3.0E-29 T 14-10-2018 JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 Gene3D G3DSA:3.40.50.12780 503 926 3.8E-118 T 14-10-2018 JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 SUPERFAMILY SSF56801 504 1053 2.49E-136 T 14-10-2018 JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 Pfam PF00975 Thioesterase domain 1554 1684 3.1E-27 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 SUPERFAMILY SSF52777 62 230 1.56E-40 T 14-10-2018 JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 SUPERFAMILY SSF52777 238 484 1.78E-40 T 14-10-2018 JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 Gene3D G3DSA:3.30.559.30 234 478 3.3E-107 T 14-10-2018 JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 Pfam PF00501 AMP-binding enzyme 520 932 3.8E-84 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 Gene3D G3DSA:3.30.300.30 927 1031 5.8E-31 T 14-10-2018 JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 Pfam PF00668 Condensation domain 1122 1530 7.2E-40 T 14-10-2018 IPR001242 Condensation domain JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 Pfam PF00668 Condensation domain 59 494 2.3E-78 T 14-10-2018 IPR001242 Condensation domain JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 ProSitePatterns PS00455 Putative AMP-binding domain signature. 672 683 - T 14-10-2018 IPR020845 AMP-binding, conserved site JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 SUPERFAMILY SSF47336 1034 1104 4.71E-16 T 14-10-2018 IPR036736 ACP-like superfamily JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 SMART SM00824 Thioesterase 1556 1713 0.0012 T 14-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1064 1079 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site JV59_30615 e76c0d9a90a8deea6ff006d7458e463c 1812 Pfam PF00550 Phosphopantetheine attachment site 1043 1103 6.6E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 SUPERFAMILY SSF56719 395 796 1.26E-87 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 SUPERFAMILY SSF55874 4 212 2.36E-75 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 Gene3D G3DSA:3.40.50.670 705 804 4.1E-27 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 Pfam PF00204 DNA gyrase B 221 391 1.5E-60 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 SUPERFAMILY SSF54211 221 393 6.26E-59 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 Gene3D G3DSA:3.30.230.10 221 393 1.9E-73 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 5.9E-71 T 14-10-2018 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 5.9E-71 T 14-10-2018 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 5.9E-71 T 14-10-2018 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 5.9E-71 T 14-10-2018 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 5.9E-71 T 14-10-2018 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 5.9E-71 T 14-10-2018 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 5.9E-71 T 14-10-2018 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 5.9E-71 T 14-10-2018 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 5.9E-71 T 14-10-2018 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 9.2E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 9.2E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 9.2E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 9.2E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 9.2E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 9.2E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 9.2E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 9.2E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 9.2E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 9.2E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 9.2E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 Gene3D G3DSA:3.40.50.670 399 572 8.0E-75 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 108.646 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 SMART SM00433 35 798 1.1E-275 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 SMART SM00387 31 175 3.8E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 734 794 1.8E-30 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 Gene3D G3DSA:3.10.20.690 593 684 1.1E-35 T 14-10-2018 JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 174 4.3E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 Gene3D G3DSA:3.30.565.10 1 220 2.8E-94 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_39225 90bba5e48960762e3acc57f4e368ac5c 805 Pfam PF01751 Toprim domain 420 532 8.5E-19 T 14-10-2018 IPR006171 TOPRIM domain JV59_27695 9b8d3e7e994ea98f2d1481dc985f8ad8 403 Pfam PF02119 Flagellar P-ring protein 61 402 3.0E-133 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JV59_27695 9b8d3e7e994ea98f2d1481dc985f8ad8 403 Hamap MF_00416 Flagellar P-ring protein [flgI]. 36 403 36.716 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JV59_27695 9b8d3e7e994ea98f2d1481dc985f8ad8 403 PRINTS PR01010 Flagellar P-ring protein signature 142 159 2.1E-76 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JV59_27695 9b8d3e7e994ea98f2d1481dc985f8ad8 403 PRINTS PR01010 Flagellar P-ring protein signature 94 109 2.1E-76 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JV59_27695 9b8d3e7e994ea98f2d1481dc985f8ad8 403 PRINTS PR01010 Flagellar P-ring protein signature 75 90 2.1E-76 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JV59_27695 9b8d3e7e994ea98f2d1481dc985f8ad8 403 PRINTS PR01010 Flagellar P-ring protein signature 60 75 2.1E-76 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JV59_27695 9b8d3e7e994ea98f2d1481dc985f8ad8 403 PRINTS PR01010 Flagellar P-ring protein signature 120 139 2.1E-76 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JV59_27695 9b8d3e7e994ea98f2d1481dc985f8ad8 403 PRINTS PR01010 Flagellar P-ring protein signature 159 177 2.1E-76 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JV59_27695 9b8d3e7e994ea98f2d1481dc985f8ad8 403 PRINTS PR01010 Flagellar P-ring protein signature 290 302 2.1E-76 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JV59_27695 9b8d3e7e994ea98f2d1481dc985f8ad8 403 PRINTS PR01010 Flagellar P-ring protein signature 200 218 2.1E-76 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JV59_27695 9b8d3e7e994ea98f2d1481dc985f8ad8 403 PRINTS PR01010 Flagellar P-ring protein signature 226 244 2.1E-76 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JV59_21745 e30368a7a5b41044c315b30f7f3e689e 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.4E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_21745 e30368a7a5b41044c315b30f7f3e689e 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.4E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_21745 e30368a7a5b41044c315b30f7f3e689e 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.4E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_21745 e30368a7a5b41044c315b30f7f3e689e 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.4E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_21745 e30368a7a5b41044c315b30f7f3e689e 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 1.4E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_21745 e30368a7a5b41044c315b30f7f3e689e 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.4E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_21745 e30368a7a5b41044c315b30f7f3e689e 239 Gene3D G3DSA:3.40.50.720 1 239 1.1E-77 T 14-10-2018 JV59_21745 e30368a7a5b41044c315b30f7f3e689e 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 1.7E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_21745 e30368a7a5b41044c315b30f7f3e689e 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 1.7E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_21745 e30368a7a5b41044c315b30f7f3e689e 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 1.7E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_21745 e30368a7a5b41044c315b30f7f3e689e 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JV59_21745 e30368a7a5b41044c315b30f7f3e689e 239 Pfam PF00106 short chain dehydrogenase 3 189 2.6E-54 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_21745 e30368a7a5b41044c315b30f7f3e689e 239 SUPERFAMILY SSF51735 3 223 2.73E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_26105 548fec4e56cd748a41a5925d77702ae5 91 Pfam PF04077 DsrH like protein 10 86 1.3E-19 T 14-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 JV59_26105 548fec4e56cd748a41a5925d77702ae5 91 SUPERFAMILY SSF75169 1 90 2.02E-20 T 14-10-2018 IPR027396 DsrEFH-like JV59_26105 548fec4e56cd748a41a5925d77702ae5 91 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 3 90 1.0E-21 T 14-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 JV59_26105 548fec4e56cd748a41a5925d77702ae5 91 Gene3D G3DSA:3.40.1260.10 1 90 1.3E-23 T 14-10-2018 IPR027396 DsrEFH-like JV59_39805 e8f3d9f8a0198bbd4e0767139a01c888 451 Gene3D G3DSA:3.30.390.30 339 451 2.2E-47 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JV59_39805 e8f3d9f8a0198bbd4e0767139a01c888 451 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 451 1.7E-212 T 14-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 JV59_39805 e8f3d9f8a0198bbd4e0767139a01c888 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 450 7.3E-33 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 JV59_39805 e8f3d9f8a0198bbd4e0767139a01c888 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 JV59_39805 e8f3d9f8a0198bbd4e0767139a01c888 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 7.2E-64 T 14-10-2018 JV59_39805 e8f3d9f8a0198bbd4e0767139a01c888 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 7.2E-64 T 14-10-2018 JV59_39805 e8f3d9f8a0198bbd4e0767139a01c888 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 7.2E-64 T 14-10-2018 JV59_39805 e8f3d9f8a0198bbd4e0767139a01c888 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 7.2E-64 T 14-10-2018 JV59_39805 e8f3d9f8a0198bbd4e0767139a01c888 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 7.2E-64 T 14-10-2018 JV59_39805 e8f3d9f8a0198bbd4e0767139a01c888 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 7.2E-64 T 14-10-2018 JV59_39805 e8f3d9f8a0198bbd4e0767139a01c888 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 7.2E-64 T 14-10-2018 JV59_39805 e8f3d9f8a0198bbd4e0767139a01c888 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 7.2E-64 T 14-10-2018 JV59_39805 e8f3d9f8a0198bbd4e0767139a01c888 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 7.2E-64 T 14-10-2018 JV59_39805 e8f3d9f8a0198bbd4e0767139a01c888 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 6.4E-72 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JV59_39805 e8f3d9f8a0198bbd4e0767139a01c888 451 PIRSF PIRSF000350 1 445 5.9E-83 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 JV59_39805 e8f3d9f8a0198bbd4e0767139a01c888 451 Gene3D G3DSA:3.50.50.60 144 261 1.1E-126 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_39805 e8f3d9f8a0198bbd4e0767139a01c888 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 8.9E-30 T 14-10-2018 JV59_39805 e8f3d9f8a0198bbd4e0767139a01c888 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 8.9E-30 T 14-10-2018 JV59_39805 e8f3d9f8a0198bbd4e0767139a01c888 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 8.9E-30 T 14-10-2018 JV59_39805 e8f3d9f8a0198bbd4e0767139a01c888 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 8.9E-30 T 14-10-2018 JV59_39805 e8f3d9f8a0198bbd4e0767139a01c888 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 8.9E-30 T 14-10-2018 JV59_39805 e8f3d9f8a0198bbd4e0767139a01c888 451 SUPERFAMILY SSF55424 337 451 4.81E-35 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JV59_39805 e8f3d9f8a0198bbd4e0767139a01c888 451 SUPERFAMILY SSF51905 1 365 8.53E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_39805 e8f3d9f8a0198bbd4e0767139a01c888 451 Gene3D G3DSA:3.50.50.60 5 315 1.1E-126 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_01075 6f700206e3708b6894ddbf05bdc78b4f 288 SUPERFAMILY SSF82689 186 284 4.97E-35 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 JV59_01075 6f700206e3708b6894ddbf05bdc78b4f 288 Pfam PF00924 Mechanosensitive ion channel 77 274 2.4E-59 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 JV59_01075 6f700206e3708b6894ddbf05bdc78b4f 288 SUPERFAMILY SSF82861 33 118 7.59E-18 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 JV59_01075 6f700206e3708b6894ddbf05bdc78b4f 288 SUPERFAMILY SSF50182 120 185 3.92E-18 T 14-10-2018 IPR010920 LSM domain superfamily JV59_01075 6f700206e3708b6894ddbf05bdc78b4f 288 Pfam PF05552 Conserved TM helix 22 69 3.7E-12 T 14-10-2018 IPR008910 Conserved TM helix JV59_01075 6f700206e3708b6894ddbf05bdc78b4f 288 Gene3D G3DSA:2.30.30.60 135 184 1.8E-22 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily JV59_01075 6f700206e3708b6894ddbf05bdc78b4f 288 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 149 183 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 JV59_01075 6f700206e3708b6894ddbf05bdc78b4f 288 Gene3D G3DSA:3.30.70.100 185 279 2.6E-30 T 14-10-2018 JV59_18485 805ca3986569f142e5a4ff396ee2b647 380 SUPERFAMILY SSF52777 167 376 1.2E-54 T 14-10-2018 JV59_18485 805ca3986569f142e5a4ff396ee2b647 380 Gene3D G3DSA:2.40.50.100 2 91 1.1E-22 T 14-10-2018 JV59_18485 805ca3986569f142e5a4ff396ee2b647 380 Gene3D G3DSA:3.30.559.10 162 379 3.9E-50 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JV59_18485 805ca3986569f142e5a4ff396ee2b647 380 SUPERFAMILY SSF47005 121 162 6.93E-9 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 JV59_18485 805ca3986569f142e5a4ff396ee2b647 380 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 JV59_18485 805ca3986569f142e5a4ff396ee2b647 380 SUPERFAMILY SSF51230 2 86 2.49E-25 T 14-10-2018 IPR011053 Single hybrid motif JV59_18485 805ca3986569f142e5a4ff396ee2b647 380 Gene3D G3DSA:4.10.320.10 116 161 1.1E-10 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 JV59_18485 805ca3986569f142e5a4ff396ee2b647 380 Pfam PF00364 Biotin-requiring enzyme 6 77 2.9E-18 T 14-10-2018 IPR000089 Biotin/lipoyl attachment JV59_18485 805ca3986569f142e5a4ff396ee2b647 380 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 171 376 4.3E-54 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 JV59_18485 805ca3986569f142e5a4ff396ee2b647 380 Pfam PF02817 e3 binding domain 128 160 4.6E-9 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 JV59_34830 6727afbdac1f6bba60d4ec051fdf075a 694 Gene3D G3DSA:3.30.300.150 551 676 1.0E-39 T 14-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_34830 6727afbdac1f6bba60d4ec051fdf075a 694 Gene3D G3DSA:3.40.50.300 13 177 4.6E-101 T 14-10-2018 JV59_34830 6727afbdac1f6bba60d4ec051fdf075a 694 Pfam PF13177 DNA polymerase III, delta subunit 20 178 6.8E-43 T 14-10-2018 JV59_34830 6727afbdac1f6bba60d4ec051fdf075a 694 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 474 551 3.2E-19 T 14-10-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_34830 6727afbdac1f6bba60d4ec051fdf075a 694 SMART SM00382 37 179 1.7E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_34830 6727afbdac1f6bba60d4ec051fdf075a 694 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 364 8.2E-32 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 JV59_34830 6727afbdac1f6bba60d4ec051fdf075a 694 Gene3D G3DSA:1.10.8.60 8 240 4.6E-101 T 14-10-2018 JV59_34830 6727afbdac1f6bba60d4ec051fdf075a 694 Gene3D G3DSA:1.20.272.10 242 361 8.2E-40 T 14-10-2018 JV59_34830 6727afbdac1f6bba60d4ec051fdf075a 694 SUPERFAMILY SSF52540 32 222 9.06E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_34830 6727afbdac1f6bba60d4ec051fdf075a 694 SUPERFAMILY SSF48019 243 362 5.87E-32 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 JV59_34830 6727afbdac1f6bba60d4ec051fdf075a 694 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 1.0E-130 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 JV59_34830 6727afbdac1f6bba60d4ec051fdf075a 694 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 553 691 7.6E-49 T 14-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_01000 b057a315daeb50a620265cae9e35fd06 238 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 231 34.269 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 JV59_01000 b057a315daeb50a620265cae9e35fd06 238 SUPERFAMILY SSF51419 1 230 1.44E-79 T 14-10-2018 IPR029066 PLP-binding barrel JV59_01000 b057a315daeb50a620265cae9e35fd06 238 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 JV59_01000 b057a315daeb50a620265cae9e35fd06 238 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 232 1.3E-83 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 JV59_01000 b057a315daeb50a620265cae9e35fd06 238 PIRSF PIRSF004848 1 238 1.3E-75 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 JV59_01000 b057a315daeb50a620265cae9e35fd06 238 Pfam PF01168 Alanine racemase, N-terminal domain 8 232 3.2E-31 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_01000 b057a315daeb50a620265cae9e35fd06 238 Gene3D G3DSA:3.20.20.10 1 238 1.4E-84 T 14-10-2018 IPR029066 PLP-binding barrel JV59_22390 7aca585535c8783ffe4ed83c4f16ecf8 211 Gene3D G3DSA:3.30.530.20 23 208 2.6E-53 T 14-10-2018 IPR023393 START-like domain superfamily JV59_22390 7aca585535c8783ffe4ed83c4f16ecf8 211 Pfam PF01852 START domain 48 190 1.6E-9 T 14-10-2018 IPR002913 START domain GO:0008289 JV59_22390 7aca585535c8783ffe4ed83c4f16ecf8 211 PIRSF PIRSF039033 1 211 1.2E-57 T 14-10-2018 IPR028347 START domain-containing protein JV59_22390 7aca585535c8783ffe4ed83c4f16ecf8 211 SUPERFAMILY SSF55961 18 195 1.29E-39 T 14-10-2018 JV59_34890 4abb496f5a97debd6bb9e6a20de12334 444 SUPERFAMILY SSF56935 26 444 6.71E-104 T 14-10-2018 JV59_34890 4abb496f5a97debd6bb9e6a20de12334 444 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 18 444 3.3E-128 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) JV59_34890 4abb496f5a97debd6bb9e6a20de12334 444 Gene3D G3DSA:2.40.160.60 26 444 5.0E-124 T 14-10-2018 JV59_34730 0c3671438403d527cbf54341b5502250 427 SMART SM01086 319 414 6.5E-34 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JV59_34730 0c3671438403d527cbf54341b5502250 427 Gene3D G3DSA:1.10.8.60 318 426 3.7E-41 T 14-10-2018 JV59_34730 0c3671438403d527cbf54341b5502250 427 SMART SM00382 113 266 2.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_34730 0c3671438403d527cbf54341b5502250 427 SMART SM00994 13 52 1.0E-24 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 JV59_34730 0c3671438403d527cbf54341b5502250 427 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 11 414 5.8E-209 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 JV59_34730 0c3671438403d527cbf54341b5502250 427 SUPERFAMILY SSF57716 14 49 5.84E-12 T 14-10-2018 JV59_34730 0c3671438403d527cbf54341b5502250 427 SUPERFAMILY SSF52540 63 404 1.05E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_34730 0c3671438403d527cbf54341b5502250 427 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 5 417 53.297 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 JV59_34730 0c3671438403d527cbf54341b5502250 427 Gene3D G3DSA:3.40.50.300 59 317 5.6E-108 T 14-10-2018 JV59_34730 0c3671438403d527cbf54341b5502250 427 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 1.2E-48 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JV59_34730 0c3671438403d527cbf54341b5502250 427 Gene3D G3DSA:3.30.50.30 2 53 2.6E-26 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily JV59_34730 0c3671438403d527cbf54341b5502250 427 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 1.9E-15 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JV59_34730 0c3671438403d527cbf54341b5502250 427 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.2E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 JV59_39680 3a0e39b35828a35c62d7b865d833bf93 494 SUPERFAMILY SSF48179 210 341 1.11E-38 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JV59_39680 3a0e39b35828a35c62d7b865d833bf93 494 SUPERFAMILY SSF48179 348 487 3.91E-42 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JV59_39680 3a0e39b35828a35c62d7b865d833bf93 494 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 488 37.093 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 JV59_39680 3a0e39b35828a35c62d7b865d833bf93 494 Gene3D G3DSA:1.10.1040.10 209 494 1.1E-118 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JV59_39680 3a0e39b35828a35c62d7b865d833bf93 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 4.5E-26 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 JV59_39680 3a0e39b35828a35c62d7b865d833bf93 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 1.6E-16 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 JV59_39680 3a0e39b35828a35c62d7b865d833bf93 494 SUPERFAMILY SSF51735 27 209 5.69E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_39680 3a0e39b35828a35c62d7b865d833bf93 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 4.0E-60 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 JV59_39680 3a0e39b35828a35c62d7b865d833bf93 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 2.9E-124 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 JV59_39680 3a0e39b35828a35c62d7b865d833bf93 494 Gene3D G3DSA:3.40.50.720 1 208 8.3E-87 T 14-10-2018 JV59_16475 7a4e5226c78ebb54c06d7bf43029b840 377 Pfam PF00534 Glycosyl transferases group 1 197 316 2.0E-21 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 JV59_16475 7a4e5226c78ebb54c06d7bf43029b840 377 Gene3D G3DSA:3.40.50.2000 205 348 2.5E-21 T 14-10-2018 JV59_16475 7a4e5226c78ebb54c06d7bf43029b840 377 Gene3D G3DSA:3.40.50.2000 3 204 5.0E-12 T 14-10-2018 JV59_16475 7a4e5226c78ebb54c06d7bf43029b840 377 Pfam PF13439 Glycosyltransferase Family 4 21 188 3.0E-8 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 JV59_16475 7a4e5226c78ebb54c06d7bf43029b840 377 SUPERFAMILY SSF53756 19 376 3.66E-41 T 14-10-2018 JV59_26400 70c35092806c1956f64bb71bcca4ab64 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 2.1E-42 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 JV59_26400 70c35092806c1956f64bb71bcca4ab64 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 2.0E-37 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 JV59_26400 70c35092806c1956f64bb71bcca4ab64 90 PIRSF PIRSF029827 1 90 6.0E-44 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 JV59_26400 70c35092806c1956f64bb71bcca4ab64 90 Gene3D G3DSA:1.10.3880.10 1 90 1.7E-39 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 JV59_26400 70c35092806c1956f64bb71bcca4ab64 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.477 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 JV59_26400 70c35092806c1956f64bb71bcca4ab64 90 SUPERFAMILY SSF111148 1 89 3.92E-41 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 JV59_24075 0129d53def8ec747bb45fccc7fc5a363 271 SUPERFAMILY SSF46689 221 270 1.25E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_24075 0129d53def8ec747bb45fccc7fc5a363 271 SMART SM00342 184 267 1.6E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_24075 0129d53def8ec747bb45fccc7fc5a363 271 SUPERFAMILY SSF46689 171 217 1.16E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_24075 0129d53def8ec747bb45fccc7fc5a363 271 Pfam PF12833 Helix-turn-helix domain 190 268 9.7E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_24075 0129d53def8ec747bb45fccc7fc5a363 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 263 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JV59_24075 0129d53def8ec747bb45fccc7fc5a363 271 Gene3D G3DSA:1.10.10.60 218 270 7.8E-14 T 14-10-2018 JV59_24075 0129d53def8ec747bb45fccc7fc5a363 271 Gene3D G3DSA:1.10.10.60 170 217 1.5E-11 T 14-10-2018 JV59_36580 64560a4cf09139fc57a9159f48adfddf 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 2.6E-41 T 14-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 JV59_36580 64560a4cf09139fc57a9159f48adfddf 375 SUPERFAMILY SSF48179 241 366 3.51E-40 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JV59_36580 64560a4cf09139fc57a9159f48adfddf 375 SUPERFAMILY SSF48600 4 88 1.48E-24 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JV59_36580 64560a4cf09139fc57a9159f48adfddf 375 Gene3D G3DSA:1.10.3660.10 248 373 4.6E-49 T 14-10-2018 JV59_36580 64560a4cf09139fc57a9159f48adfddf 375 Pfam PF01817 Chorismate mutase type II 9 87 7.4E-22 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JV59_36580 64560a4cf09139fc57a9159f48adfddf 375 Pfam PF02153 Prephenate dehydrogenase 135 343 5.6E-29 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 JV59_36580 64560a4cf09139fc57a9159f48adfddf 375 Gene3D G3DSA:3.40.50.720 81 247 1.6E-42 T 14-10-2018 JV59_36580 64560a4cf09139fc57a9159f48adfddf 375 SMART SM00830 9 89 1.4E-30 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JV59_36580 64560a4cf09139fc57a9159f48adfddf 375 SUPERFAMILY SSF51735 91 237 2.36E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_36580 64560a4cf09139fc57a9159f48adfddf 375 Gene3D G3DSA:1.20.59.10 1 80 1.7E-18 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JV59_36580 64560a4cf09139fc57a9159f48adfddf 375 PIRSF PIRSF001499 1 374 1.1E-179 T 14-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 JV59_37405 1e706e204ab5dcfa61e1dbe537af7e2d 266 SUPERFAMILY SSF49785 2 156 2.72E-19 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily JV59_37405 1e706e204ab5dcfa61e1dbe537af7e2d 266 Gene3D G3DSA:2.60.120.260 31 156 1.0E-10 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily JV59_16315 60490c220b7c641f72fed496f71875bc 790 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 344 9.5E-120 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 JV59_16315 60490c220b7c641f72fed496f71875bc 790 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 693 708 8.7E-6 T 14-10-2018 JV59_16315 60490c220b7c641f72fed496f71875bc 790 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 746 758 8.7E-6 T 14-10-2018 JV59_16315 60490c220b7c641f72fed496f71875bc 790 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 710 725 8.7E-6 T 14-10-2018 JV59_16315 60490c220b7c641f72fed496f71875bc 790 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 JV59_16315 60490c220b7c641f72fed496f71875bc 790 SUPERFAMILY SSF51621 460 787 7.14E-99 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JV59_16315 60490c220b7c641f72fed496f71875bc 790 Gene3D G3DSA:3.20.20.60 477 787 3.7E-105 T 14-10-2018 JV59_16315 60490c220b7c641f72fed496f71875bc 790 PIRSF PIRSF000854 1 790 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 JV59_16315 60490c220b7c641f72fed496f71875bc 790 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 JV59_16315 60490c220b7c641f72fed496f71875bc 790 Gene3D G3DSA:3.30.470.20 193 356 1.2E-58 T 14-10-2018 JV59_16315 60490c220b7c641f72fed496f71875bc 790 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 6 786 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 JV59_16315 60490c220b7c641f72fed496f71875bc 790 SUPERFAMILY SSF56059 1 383 1.77E-107 T 14-10-2018 JV59_16315 60490c220b7c641f72fed496f71875bc 790 Gene3D G3DSA:3.30.1490.20 1 192 7.5E-73 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JV59_16315 60490c220b7c641f72fed496f71875bc 790 SUPERFAMILY SSF52009 348 466 2.35E-34 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 JV59_16315 60490c220b7c641f72fed496f71875bc 790 Gene3D G3DSA:3.50.30.10 358 476 5.6E-41 T 14-10-2018 JV59_16315 60490c220b7c641f72fed496f71875bc 790 Pfam PF00391 PEP-utilising enzyme, mobile domain 384 454 2.5E-26 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JV59_16315 60490c220b7c641f72fed496f71875bc 790 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 481 782 8.0E-63 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 JV59_28635 c0b270551d79a04f29d699279697a60b 450 Gene3D G3DSA:2.120.10.30 185 450 2.3E-97 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like JV59_28635 c0b270551d79a04f29d699279697a60b 450 SUPERFAMILY SSF52964 29 181 2.09E-40 T 14-10-2018 JV59_28635 c0b270551d79a04f29d699279697a60b 450 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 16 447 1.4E-168 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 JV59_28635 c0b270551d79a04f29d699279697a60b 450 Pfam PF07676 WD40-like Beta Propeller Repeat 257 292 7.7E-7 T 14-10-2018 IPR011659 WD40-like Beta Propeller JV59_28635 c0b270551d79a04f29d699279697a60b 450 Pfam PF07676 WD40-like Beta Propeller Repeat 300 336 4.3E-14 T 14-10-2018 IPR011659 WD40-like Beta Propeller JV59_28635 c0b270551d79a04f29d699279697a60b 450 Pfam PF07676 WD40-like Beta Propeller Repeat 222 248 1.4E-8 T 14-10-2018 IPR011659 WD40-like Beta Propeller JV59_28635 c0b270551d79a04f29d699279697a60b 450 Pfam PF04052 TolB amino-terminal domain 24 126 1.6E-34 T 14-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 JV59_28635 c0b270551d79a04f29d699279697a60b 450 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 5 446 51.306 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 JV59_28635 c0b270551d79a04f29d699279697a60b 450 Gene3D G3DSA:3.40.50.10070 23 183 8.3E-49 T 14-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 JV59_28635 c0b270551d79a04f29d699279697a60b 450 SUPERFAMILY SSF69304 181 448 8.76E-58 T 14-10-2018 JV59_23100 e17df9ff035b7f0d9f6c48661403b48a 69 Pfam PF11686 Protein of unknown function (DUF3283) 4 64 5.8E-30 T 14-10-2018 IPR021700 Protein of unknown function DUF3283 JV59_23100 e17df9ff035b7f0d9f6c48661403b48a 69 SUPERFAMILY SSF46575 1 63 8.76E-5 T 14-10-2018 JV59_18205 34a833e22c332f00b9ba7ad7f7e65ada 494 Pfam PF00158 Sigma-54 interaction domain 178 343 1.3E-66 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JV59_18205 34a833e22c332f00b9ba7ad7f7e65ada 494 Gene3D G3DSA:1.10.8.60 348 429 2.0E-19 T 14-10-2018 JV59_18205 34a833e22c332f00b9ba7ad7f7e65ada 494 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 394 403 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site JV59_18205 34a833e22c332f00b9ba7ad7f7e65ada 494 Gene3D G3DSA:3.40.50.300 164 347 3.8E-61 T 14-10-2018 JV59_18205 34a833e22c332f00b9ba7ad7f7e65ada 494 SMART SM00382 197 340 2.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_18205 34a833e22c332f00b9ba7ad7f7e65ada 494 SUPERFAMILY SSF52540 180 423 4.48E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_18205 34a833e22c332f00b9ba7ad7f7e65ada 494 Gene3D G3DSA:1.10.10.60 430 493 1.3E-10 T 14-10-2018 JV59_18205 34a833e22c332f00b9ba7ad7f7e65ada 494 SUPERFAMILY SSF46689 394 492 7.17E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_18205 34a833e22c332f00b9ba7ad7f7e65ada 494 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 263 278 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JV59_18080 0d796f7171eb754f26f0c86cb53e8444 311 Gene3D G3DSA:3.40.50.2300 164 299 2.5E-22 T 14-10-2018 JV59_18080 0d796f7171eb754f26f0c86cb53e8444 311 PIRSF PIRSF002867 1 298 7.7E-87 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV JV59_18080 0d796f7171eb754f26f0c86cb53e8444 311 SMART SM00448 174 292 5.8E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_18080 0d796f7171eb754f26f0c86cb53e8444 311 SUPERFAMILY SSF52172 174 292 4.7E-21 T 14-10-2018 IPR011006 CheY-like superfamily JV59_18080 0d796f7171eb754f26f0c86cb53e8444 311 SMART SM00260 11 148 1.4E-19 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JV59_18080 0d796f7171eb754f26f0c86cb53e8444 311 Gene3D G3DSA:2.30.30.40 22 142 2.9E-24 T 14-10-2018 JV59_18080 0d796f7171eb754f26f0c86cb53e8444 311 Pfam PF01584 CheW-like domain 14 150 2.3E-30 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JV59_18080 0d796f7171eb754f26f0c86cb53e8444 311 Gene3D G3DSA:2.40.50.180 32 147 2.9E-24 T 14-10-2018 JV59_18080 0d796f7171eb754f26f0c86cb53e8444 311 SUPERFAMILY SSF50341 11 153 1.05E-29 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 JV59_18080 0d796f7171eb754f26f0c86cb53e8444 311 Pfam PF00072 Response regulator receiver domain 176 290 4.3E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_16280 dc8b3f1eb478360026985e70e60d0e7f 568 SUPERFAMILY SSF111369 132 324 5.62E-17 T 14-10-2018 JV59_16280 dc8b3f1eb478360026985e70e60d0e7f 568 Gene3D G3DSA:2.40.50.320 496 566 9.6E-16 T 14-10-2018 JV59_16280 dc8b3f1eb478360026985e70e60d0e7f 568 Gene3D G3DSA:2.40.50.320 415 486 2.1E-19 T 14-10-2018 JV59_16280 dc8b3f1eb478360026985e70e60d0e7f 568 Gene3D G3DSA:2.40.50.100 200 246 1.3E-29 T 14-10-2018 JV59_16280 dc8b3f1eb478360026985e70e60d0e7f 568 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 111 319 3.7E-78 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JV59_16280 dc8b3f1eb478360026985e70e60d0e7f 568 Gene3D G3DSA:2.40.420.20 325 414 2.8E-22 T 14-10-2018 JV59_16280 dc8b3f1eb478360026985e70e60d0e7f 568 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 212 392 4.9E-35 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 JV59_16280 dc8b3f1eb478360026985e70e60d0e7f 568 Pfam PF11604 Copper binding periplasmic protein CusF 419 484 1.4E-21 T 14-10-2018 IPR021647 Copper binding periplasmic protein CusF JV59_16280 dc8b3f1eb478360026985e70e60d0e7f 568 Pfam PF11604 Copper binding periplasmic protein CusF 499 563 1.6E-18 T 14-10-2018 IPR021647 Copper binding periplasmic protein CusF JV59_16280 dc8b3f1eb478360026985e70e60d0e7f 568 Gene3D G3DSA:2.40.50.100 130 174 7.2E-6 T 14-10-2018 JV59_16280 dc8b3f1eb478360026985e70e60d0e7f 568 Gene3D G3DSA:2.40.30.170 247 320 1.3E-29 T 14-10-2018 JV59_01345 299b80d2831950a05a61f0959079c3ec 348 Gene3D G3DSA:3.30.2350.20 18 337 4.2E-105 T 14-10-2018 JV59_01345 299b80d2831950a05a61f0959079c3ec 348 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 14-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 JV59_01345 299b80d2831950a05a61f0959079c3ec 348 Gene3D G3DSA:3.30.2340.10 170 302 4.2E-105 T 14-10-2018 JV59_01345 299b80d2831950a05a61f0959079c3ec 348 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 342 28.109 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_01345 299b80d2831950a05a61f0959079c3ec 348 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 188 337 5.7E-22 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_01345 299b80d2831950a05a61f0959079c3ec 348 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 9 171 6.3E-41 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_01345 299b80d2831950a05a61f0959079c3ec 348 SUPERFAMILY SSF55120 5 339 5.61E-96 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_38215 88e234cc2057849ff9e8dbfeaae7cd08 429 Gene3D G3DSA:3.30.1490.20 121 190 4.4E-29 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JV59_38215 88e234cc2057849ff9e8dbfeaae7cd08 429 SMART SM01209 103 296 6.0E-143 T 14-10-2018 JV59_38215 88e234cc2057849ff9e8dbfeaae7cd08 429 SMART SM01210 330 423 7.9E-53 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JV59_38215 88e234cc2057849ff9e8dbfeaae7cd08 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JV59_38215 88e234cc2057849ff9e8dbfeaae7cd08 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 4.9E-35 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JV59_38215 88e234cc2057849ff9e8dbfeaae7cd08 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 1.9E-83 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JV59_38215 88e234cc2057849ff9e8dbfeaae7cd08 429 SUPERFAMILY SSF51246 329 423 2.51E-31 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 JV59_38215 88e234cc2057849ff9e8dbfeaae7cd08 429 SUPERFAMILY SSF52440 1 103 3.45E-36 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JV59_38215 88e234cc2057849ff9e8dbfeaae7cd08 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 424 1.3E-184 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JV59_38215 88e234cc2057849ff9e8dbfeaae7cd08 429 Gene3D G3DSA:3.40.50.20 2 95 4.4E-37 T 14-10-2018 JV59_38215 88e234cc2057849ff9e8dbfeaae7cd08 429 SUPERFAMILY SSF56059 104 320 1.71E-68 T 14-10-2018 JV59_38215 88e234cc2057849ff9e8dbfeaae7cd08 429 Gene3D G3DSA:3.90.600.10 330 424 2.8E-32 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JV59_38215 88e234cc2057849ff9e8dbfeaae7cd08 429 Gene3D G3DSA:3.30.470.20 191 329 8.6E-61 T 14-10-2018 JV59_38215 88e234cc2057849ff9e8dbfeaae7cd08 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 2.0E-28 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JV59_38215 88e234cc2057849ff9e8dbfeaae7cd08 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 44.095 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JV59_37715 4683821d199fb8457566c6c30b6fc0ae 154 Gene3D G3DSA:1.10.10.10 3 91 2.2E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_37715 4683821d199fb8457566c6c30b6fc0ae 154 Pfam PF01475 Ferric uptake regulator family 22 140 4.6E-21 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 JV59_37715 4683821d199fb8457566c6c30b6fc0ae 154 SUPERFAMILY SSF46785 14 146 6.28E-36 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_37715 4683821d199fb8457566c6c30b6fc0ae 154 Gene3D G3DSA:3.30.1490.190 92 153 3.6E-17 T 14-10-2018 JV59_01475 2ee2c12fdefa6b485a253900da4ceb17 887 SUPERFAMILY SSF52518 56 469 2.83E-139 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_01475 2ee2c12fdefa6b485a253900da4ceb17 887 Gene3D G3DSA:3.40.50.970 472 706 3.0E-111 T 14-10-2018 JV59_01475 2ee2c12fdefa6b485a253900da4ceb17 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 886 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 JV59_01475 2ee2c12fdefa6b485a253900da4ceb17 887 SUPERFAMILY SSF52518 474 701 2.24E-97 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_01475 2ee2c12fdefa6b485a253900da4ceb17 887 Gene3D G3DSA:3.40.50.970 55 471 1.7E-131 T 14-10-2018 JV59_01475 2ee2c12fdefa6b485a253900da4ceb17 887 Gene3D G3DSA:3.40.50.920 707 887 4.3E-70 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JV59_01475 2ee2c12fdefa6b485a253900da4ceb17 887 PIRSF PIRSF000156 1 887 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 JV59_01475 2ee2c12fdefa6b485a253900da4ceb17 887 SUPERFAMILY SSF52922 702 886 2.45E-58 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JV59_01475 2ee2c12fdefa6b485a253900da4ceb17 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 103 298 3.8E-9 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JV59_17330 66ca9df774e00f7dab857f7504883bce 667 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 650 42.197 T 14-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 JV59_17330 66ca9df774e00f7dab857f7504883bce 667 SUPERFAMILY SSF50249 568 649 1.41E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_17330 66ca9df774e00f7dab857f7504883bce 667 SUPERFAMILY SSF50249 187 562 7.88E-108 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_17330 66ca9df774e00f7dab857f7504883bce 667 SUPERFAMILY SSF50249 8 80 2.0E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_17330 66ca9df774e00f7dab857f7504883bce 667 SUPERFAMILY SSF50249 84 173 2.97E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_17330 66ca9df774e00f7dab857f7504883bce 667 Gene3D G3DSA:2.40.50.140 1 81 3.5E-28 T 14-10-2018 JV59_17330 66ca9df774e00f7dab857f7504883bce 667 Gene3D G3DSA:2.40.50.140 565 651 8.2E-32 T 14-10-2018 JV59_17330 66ca9df774e00f7dab857f7504883bce 667 Gene3D G3DSA:2.40.50.640 83 157 8.4E-31 T 14-10-2018 JV59_17330 66ca9df774e00f7dab857f7504883bce 667 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 649 0.0 T 14-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 JV59_17330 66ca9df774e00f7dab857f7504883bce 667 SMART SM00955 193 523 1.2E-116 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 JV59_17330 66ca9df774e00f7dab857f7504883bce 667 Pfam PF08206 Ribonuclease B OB domain 24 78 6.9E-17 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain JV59_17330 66ca9df774e00f7dab857f7504883bce 667 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 648 1.1E-186 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 JV59_17330 66ca9df774e00f7dab857f7504883bce 667 SMART SM00357 23 79 5.1E-9 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 JV59_17330 66ca9df774e00f7dab857f7504883bce 667 ProSitePatterns PS01175 Ribonuclease II family signature. 490 514 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site JV59_17330 66ca9df774e00f7dab857f7504883bce 667 Pfam PF00575 S1 RNA binding domain 564 646 2.6E-9 T 14-10-2018 IPR003029 S1 domain GO:0003676 JV59_17330 66ca9df774e00f7dab857f7504883bce 667 Pfam PF00773 RNB domain 193 521 2.1E-87 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 JV59_15960 2dbc9370b31755e81c5b6523a3c35c35 306 Gene3D G3DSA:1.10.3720.10 83 300 9.5E-20 T 14-10-2018 IPR035906 MetI-like superfamily JV59_15960 2dbc9370b31755e81c5b6523a3c35c35 306 SUPERFAMILY SSF161098 91 290 3.66E-18 T 14-10-2018 IPR035906 MetI-like superfamily JV59_15960 2dbc9370b31755e81c5b6523a3c35c35 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 305 2.9E-39 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_39640 604427afcb402687aa773ad82576b245 931 SUPERFAMILY SSF53098 335 520 1.43E-55 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JV59_39640 604427afcb402687aa773ad82576b245 931 Pfam PF00476 DNA polymerase family A 553 928 1.2E-157 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_39640 604427afcb402687aa773ad82576b245 931 SMART SM00475 7 267 4.1E-128 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 JV59_39640 604427afcb402687aa773ad82576b245 931 SUPERFAMILY SSF47807 171 291 2.39E-31 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily JV59_39640 604427afcb402687aa773ad82576b245 931 SMART SM00474 332 519 2.5E-42 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 JV59_39640 604427afcb402687aa773ad82576b245 931 Gene3D G3DSA:3.40.50.1010 9 284 9.5E-96 T 14-10-2018 JV59_39640 604427afcb402687aa773ad82576b245 931 Gene3D G3DSA:3.30.420.10 329 544 1.9E-69 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JV59_39640 604427afcb402687aa773ad82576b245 931 SUPERFAMILY SSF56672 525 931 7.12E-159 T 14-10-2018 JV59_39640 604427afcb402687aa773ad82576b245 931 SUPERFAMILY SSF88723 7 170 2.13E-58 T 14-10-2018 IPR029060 PIN-like domain superfamily JV59_39640 604427afcb402687aa773ad82576b245 931 SMART SM00482 688 895 4.2E-116 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_39640 604427afcb402687aa773ad82576b245 931 Gene3D G3DSA:1.10.150.20 174 253 9.5E-96 T 14-10-2018 JV59_39640 604427afcb402687aa773ad82576b245 931 Gene3D G3DSA:3.30.70.370 666 927 1.4E-113 T 14-10-2018 JV59_39640 604427afcb402687aa773ad82576b245 931 ProSitePatterns PS00447 DNA polymerase family A signature. 756 775 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_39640 604427afcb402687aa773ad82576b245 931 Pfam PF01612 3'-5' exonuclease 332 518 3.2E-40 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 JV59_39640 604427afcb402687aa773ad82576b245 931 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 3.8E-29 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 JV59_39640 604427afcb402687aa773ad82576b245 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 657 679 4.9E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_39640 604427afcb402687aa773ad82576b245 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 756 781 4.9E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_39640 604427afcb402687aa773ad82576b245 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 680 695 4.9E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_39640 604427afcb402687aa773ad82576b245 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 815 826 4.9E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_39640 604427afcb402687aa773ad82576b245 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 702 725 4.9E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_39640 604427afcb402687aa773ad82576b245 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 793 804 4.9E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_39640 604427afcb402687aa773ad82576b245 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 878 891 4.9E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_39640 604427afcb402687aa773ad82576b245 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 732 745 4.9E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_39640 604427afcb402687aa773ad82576b245 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 847 863 4.9E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_39640 604427afcb402687aa773ad82576b245 931 Gene3D G3DSA:1.20.1060.10 545 660 9.4E-44 T 14-10-2018 JV59_39640 604427afcb402687aa773ad82576b245 931 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 1.3E-54 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 JV59_39640 604427afcb402687aa773ad82576b245 931 SMART SM00279 173 208 1.2E-13 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 JV59_39640 604427afcb402687aa773ad82576b245 931 Gene3D G3DSA:1.10.150.20 711 854 1.4E-113 T 14-10-2018 JV59_39640 604427afcb402687aa773ad82576b245 931 TIGRFAM TIGR00593 pola: DNA polymerase I 9 931 1.6E-287 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_35020 62fffae7b5cb9ad769727e308d5ee9d9 142 Gene3D G3DSA:3.30.428.10 1 142 3.3E-42 T 14-10-2018 IPR036265 HIT-like superfamily JV59_35020 62fffae7b5cb9ad769727e308d5ee9d9 142 SUPERFAMILY SSF54197 3 133 1.42E-32 T 14-10-2018 IPR036265 HIT-like superfamily JV59_35020 62fffae7b5cb9ad769727e308d5ee9d9 142 Pfam PF01230 HIT domain 11 99 7.9E-17 T 14-10-2018 IPR001310 Histidine triad (HIT) protein JV59_35020 62fffae7b5cb9ad769727e308d5ee9d9 142 PIRSF PIRSF000714 2 140 2.1E-50 T 14-10-2018 IPR026026 Histidine triad hydrolase, Hint-type JV59_23115 b66183b9b3e445d0d7604ca1bebb9422 310 Gene3D G3DSA:3.40.50.300 3 307 1.7E-78 T 14-10-2018 JV59_23115 b66183b9b3e445d0d7604ca1bebb9422 310 SUPERFAMILY SSF52540 5 254 1.05E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_23115 b66183b9b3e445d0d7604ca1bebb9422 310 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 265 8.5E-8 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JV59_23115 b66183b9b3e445d0d7604ca1bebb9422 310 SMART SM00382 39 233 1.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_23115 b66183b9b3e445d0d7604ca1bebb9422 310 Pfam PF00005 ABC transporter 30 184 2.2E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_23115 b66183b9b3e445d0d7604ca1bebb9422 310 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_32010 e4040c1e21456b6b617737154269d9b7 324 Gene3D G3DSA:2.40.50.100 42 240 2.4E-30 T 14-10-2018 JV59_32010 e4040c1e21456b6b617737154269d9b7 324 SUPERFAMILY SSF111369 41 102 1.31E-6 T 14-10-2018 JV59_32010 e4040c1e21456b6b617737154269d9b7 324 Gene3D G3DSA:2.40.30.170 33 322 2.4E-30 T 14-10-2018 JV59_32010 e4040c1e21456b6b617737154269d9b7 324 Gene3D G3DSA:1.10.287.470 76 205 2.4E-30 T 14-10-2018 JV59_32010 e4040c1e21456b6b617737154269d9b7 324 Pfam PF13437 HlyD family secretion protein 206 283 9.0E-8 T 14-10-2018 JV59_32010 e4040c1e21456b6b617737154269d9b7 324 Pfam PF13533 Biotin-lipoyl like 45 88 1.9E-11 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain JV59_01960 f4ef321a0ffc0f7b41c803c013936abf 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.795 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid JV59_01960 f4ef321a0ffc0f7b41c803c013936abf 130 Gene3D G3DSA:3.30.230.10 1 130 5.4E-54 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JV59_01960 f4ef321a0ffc0f7b41c803c013936abf 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 JV59_01960 f4ef321a0ffc0f7b41c803c013936abf 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.3E-46 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 JV59_01960 f4ef321a0ffc0f7b41c803c013936abf 130 SUPERFAMILY SSF54211 5 130 2.54E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JV59_18410 8abe0b2425f6a0bde22d0f0e0680bed9 534 SUPERFAMILY SSF52096 22 267 1.76E-71 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JV59_18410 8abe0b2425f6a0bde22d0f0e0680bed9 534 Pfam PF01039 Carboxyl transferase domain 48 524 1.2E-149 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 JV59_18410 8abe0b2425f6a0bde22d0f0e0680bed9 534 Gene3D G3DSA:3.90.226.10 1 268 6.6E-97 T 14-10-2018 JV59_18410 8abe0b2425f6a0bde22d0f0e0680bed9 534 SUPERFAMILY SSF52096 271 534 2.71E-84 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JV59_18410 8abe0b2425f6a0bde22d0f0e0680bed9 534 Gene3D G3DSA:3.90.226.10 274 534 5.6E-100 T 14-10-2018 JV59_34300 aefb3b0995d066d9c627101bf50608af 106 Pfam PF06844 Protein of unknown function (DUF1244) 35 101 2.4E-36 T 14-10-2018 IPR023163 SMc04008-like domain JV59_34300 aefb3b0995d066d9c627101bf50608af 106 SUPERFAMILY SSF158757 8 85 5.75E-37 T 14-10-2018 IPR036810 SMc04008-like superfamily JV59_34300 aefb3b0995d066d9c627101bf50608af 106 Gene3D G3DSA:1.10.3340.10 4 106 1.1E-46 T 14-10-2018 IPR036810 SMc04008-like superfamily JV59_30845 65f694a87f8a4e6cb0fce37798d200b9 482 Gene3D G3DSA:3.40.50.300 147 324 2.0E-63 T 14-10-2018 JV59_30845 65f694a87f8a4e6cb0fce37798d200b9 482 SMART SM00382 175 318 9.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_30845 65f694a87f8a4e6cb0fce37798d200b9 482 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site JV59_30845 65f694a87f8a4e6cb0fce37798d200b9 482 Pfam PF02954 Bacterial regulatory protein, Fis family 432 473 9.9E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_30845 65f694a87f8a4e6cb0fce37798d200b9 482 Gene3D G3DSA:1.10.10.60 423 472 8.3E-13 T 14-10-2018 JV59_30845 65f694a87f8a4e6cb0fce37798d200b9 482 Pfam PF00158 Sigma-54 interaction domain 155 320 2.2E-68 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JV59_30845 65f694a87f8a4e6cb0fce37798d200b9 482 Gene3D G3DSA:3.40.50.2300 14 146 1.0E-29 T 14-10-2018 JV59_30845 65f694a87f8a4e6cb0fce37798d200b9 482 SUPERFAMILY SSF46689 426 475 1.7E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_30845 65f694a87f8a4e6cb0fce37798d200b9 482 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JV59_30845 65f694a87f8a4e6cb0fce37798d200b9 482 SUPERFAMILY SSF52172 16 199 4.98E-36 T 14-10-2018 IPR011006 CheY-like superfamily JV59_30845 65f694a87f8a4e6cb0fce37798d200b9 482 Gene3D G3DSA:1.10.8.60 325 389 1.9E-15 T 14-10-2018 JV59_30845 65f694a87f8a4e6cb0fce37798d200b9 482 SMART SM00448 16 127 3.6E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_30845 65f694a87f8a4e6cb0fce37798d200b9 482 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JV59_30845 65f694a87f8a4e6cb0fce37798d200b9 482 SUPERFAMILY SSF52540 154 384 2.77E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_30845 65f694a87f8a4e6cb0fce37798d200b9 482 Pfam PF00072 Response regulator receiver domain 18 128 5.7E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_34315 bfed8bd488996428391a3e6989346947 623 Pfam PF07690 Major Facilitator Superfamily 42 380 8.9E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_34315 bfed8bd488996428391a3e6989346947 623 SUPERFAMILY SSF69593 394 604 1.96E-30 T 14-10-2018 JV59_34315 bfed8bd488996428391a3e6989346947 623 Gene3D G3DSA:1.20.1250.20 10 421 2.6E-27 T 14-10-2018 JV59_34315 bfed8bd488996428391a3e6989346947 623 Pfam PF01553 Acyltransferase 441 567 2.0E-25 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JV59_34315 bfed8bd488996428391a3e6989346947 623 SUPERFAMILY SSF103473 11 423 1.57E-28 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_34315 bfed8bd488996428391a3e6989346947 623 SMART SM00563 455 569 4.5E-36 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JV59_23450 e61f11e45504c949f22862ef37818031 444 SUPERFAMILY SSF53756 2 440 1.31E-25 T 14-10-2018 JV59_23450 e61f11e45504c949f22862ef37818031 444 Pfam PF00534 Glycosyl transferases group 1 216 370 2.3E-9 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 JV59_23450 e61f11e45504c949f22862ef37818031 444 Gene3D G3DSA:3.40.50.2000 1 211 4.9E-9 T 14-10-2018 JV59_23450 e61f11e45504c949f22862ef37818031 444 Gene3D G3DSA:3.40.50.2000 212 423 3.8E-21 T 14-10-2018 JV59_16415 a79904f7cf3361fa888009d7490502c0 350 Gene3D G3DSA:3.20.20.70 1 349 2.3E-166 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_16415 a79904f7cf3361fa888009d7490502c0 350 PIRSF PIRSF001361 1 350 7.2E-163 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 JV59_16415 a79904f7cf3361fa888009d7490502c0 350 Pfam PF00793 DAHP synthetase I family 40 337 2.8E-105 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 JV59_16415 a79904f7cf3361fa888009d7490502c0 350 SUPERFAMILY SSF51569 6 347 6.49E-139 T 14-10-2018 JV59_16415 a79904f7cf3361fa888009d7490502c0 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 8.1E-169 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 JV59_37930 8b13d120802bd9c572647294364304da 467 SUPERFAMILY SSF51338 27 454 4.59E-36 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JV59_37930 8b13d120802bd9c572647294364304da 467 SUPERFAMILY SSF51556 84 382 1.26E-81 T 14-10-2018 IPR032466 Metal-dependent hydrolase JV59_37930 8b13d120802bd9c572647294364304da 467 Pfam PF01979 Amidohydrolase family 81 429 4.4E-71 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JV59_37930 8b13d120802bd9c572647294364304da 467 Gene3D G3DSA:3.20.20.140 85 374 1.5E-145 T 14-10-2018 JV59_37930 8b13d120802bd9c572647294364304da 467 PRINTS PR01745 Dense granule Gra2 protein signature 123 147 3.2E-5 T 14-10-2018 IPR008118 Dense granule Gra2 protein JV59_37930 8b13d120802bd9c572647294364304da 467 PRINTS PR01745 Dense granule Gra2 protein signature 1 24 3.2E-5 T 14-10-2018 IPR008118 Dense granule Gra2 protein JV59_37930 8b13d120802bd9c572647294364304da 467 Gene3D G3DSA:2.30.40.10 35 448 1.5E-145 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JV59_01655 6663fb4be9f0824792e793e1ee14e678 1128 SUPERFAMILY SSF47384 446 528 2.35E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_01655 6663fb4be9f0824792e793e1ee14e678 1128 SMART SM00448 722 835 2.6E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_01655 6663fb4be9f0824792e793e1ee14e678 1128 Gene3D G3DSA:1.10.8.500 376 426 6.1E-18 T 14-10-2018 JV59_01655 6663fb4be9f0824792e793e1ee14e678 1128 Pfam PF00672 HAMP domain 379 427 3.8E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_01655 6663fb4be9f0824792e793e1ee14e678 1128 Gene3D G3DSA:3.30.450.20 864 951 1.4E-6 T 14-10-2018 JV59_01655 6663fb4be9f0824792e793e1ee14e678 1128 SUPERFAMILY SSF55874 516 687 8.64E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_01655 6663fb4be9f0824792e793e1ee14e678 1128 Gene3D G3DSA:3.40.50.2300 722 863 1.3E-42 T 14-10-2018 JV59_01655 6663fb4be9f0824792e793e1ee14e678 1128 SMART SM00388 459 527 1.6E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_01655 6663fb4be9f0824792e793e1ee14e678 1128 SMART SM00091 873 938 0.0024 T 14-10-2018 IPR000014 PAS domain JV59_01655 6663fb4be9f0824792e793e1ee14e678 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 3.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_01655 6663fb4be9f0824792e793e1ee14e678 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 3.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_01655 6663fb4be9f0824792e793e1ee14e678 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 3.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_01655 6663fb4be9f0824792e793e1ee14e678 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 3.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_01655 6663fb4be9f0824792e793e1ee14e678 1128 SUPERFAMILY SSF52172 717 850 3.7E-42 T 14-10-2018 IPR011006 CheY-like superfamily JV59_01655 6663fb4be9f0824792e793e1ee14e678 1128 Pfam PF00072 Response regulator receiver domain 725 835 6.8E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_01655 6663fb4be9f0824792e793e1ee14e678 1128 SUPERFAMILY SSF158472 378 427 3.01E-11 T 14-10-2018 JV59_01655 6663fb4be9f0824792e793e1ee14e678 1128 Gene3D G3DSA:3.30.450.20 252 358 1.8E-8 T 14-10-2018 JV59_01655 6663fb4be9f0824792e793e1ee14e678 1128 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 682 1.1E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_01655 6663fb4be9f0824792e793e1ee14e678 1128 Pfam PF00512 His Kinase A (phospho-acceptor) domain 460 525 2.1E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_01655 6663fb4be9f0824792e793e1ee14e678 1128 Gene3D G3DSA:3.30.565.10 538 688 2.9E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_01655 6663fb4be9f0824792e793e1ee14e678 1128 SUPERFAMILY SSF55785 860 934 1.92E-7 T 14-10-2018 IPR035965 PAS domain superfamily JV59_01655 6663fb4be9f0824792e793e1ee14e678 1128 Gene3D G3DSA:1.10.287.130 427 525 7.5E-22 T 14-10-2018 JV59_01655 6663fb4be9f0824792e793e1ee14e678 1128 SMART SM00387 573 684 2.9E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_01655 6663fb4be9f0824792e793e1ee14e678 1128 SMART SM00304 377 430 4.9E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_22745 f49006fe4071d79e66a0d5027df0adc3 103 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 13 87 1.9E-16 T 14-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 JV59_22745 f49006fe4071d79e66a0d5027df0adc3 103 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 9 101 9.6E-36 T 14-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 JV59_25510 33b17bc9d30d9f0f91d1f033ee75d614 302 SUPERFAMILY SSF56959 68 284 2.62E-23 T 14-10-2018 IPR036435 Leukocidin/porin MspA superfamily JV59_25510 33b17bc9d30d9f0f91d1f033ee75d614 302 Pfam PF07968 Leukocidin/Hemolysin toxin family 91 297 3.3E-18 T 14-10-2018 IPR016183 Leukocidin/Hemolysin toxin GO:0005576|GO:0051715 JV59_25510 33b17bc9d30d9f0f91d1f033ee75d614 302 Gene3D G3DSA:2.70.240.10 64 300 2.6E-24 T 14-10-2018 JV59_16740 5922759f482a71d293876e52b26d0a95 419 Pfam PF12704 MacB-like periplasmic core domain 23 221 2.3E-14 T 14-10-2018 IPR025857 MacB-like periplasmic core domain JV59_16740 5922759f482a71d293876e52b26d0a95 419 Pfam PF02687 FtsX-like permease family 312 409 3.5E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JV59_24220 e7f0973729518988f0d5fc1272064d66 441 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 181 405 2.2E-10 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase JV59_24220 e7f0973729518988f0d5fc1272064d66 441 SUPERFAMILY SSF56219 175 440 9.55E-64 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JV59_24220 e7f0973729518988f0d5fc1272064d66 441 Gene3D G3DSA:3.60.10.10 172 441 7.2E-65 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JV59_35750 13501a9fc94453e4189923e449cb284e 119 Gene3D G3DSA:3.30.1450.10 34 114 1.4E-24 T 14-10-2018 IPR037873 BamE-like JV59_35750 13501a9fc94453e4189923e449cb284e 119 Pfam PF04355 SmpA / OmlA family 35 101 9.4E-26 T 14-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 JV59_35750 13501a9fc94453e4189923e449cb284e 119 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 113 32.729 T 14-10-2018 IPR026592 Outer membrane protein assembly factor BamE JV59_38535 92ac879319d4e2e7a61d9e1669885325 500 TIGRFAM TIGR03590 PseG: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase 1 294 5.3E-80 T 14-10-2018 IPR020023 UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase JV59_38535 92ac879319d4e2e7a61d9e1669885325 500 Gene3D G3DSA:3.40.630.30 350 498 2.4E-18 T 14-10-2018 JV59_38535 92ac879319d4e2e7a61d9e1669885325 500 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 209 315 1.1E-6 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 JV59_38535 92ac879319d4e2e7a61d9e1669885325 500 Gene3D G3DSA:3.40.50.2000 167 308 6.3E-33 T 14-10-2018 JV59_38535 92ac879319d4e2e7a61d9e1669885325 500 Gene3D G3DSA:3.40.50.11190 1 165 6.3E-33 T 14-10-2018 JV59_38535 92ac879319d4e2e7a61d9e1669885325 500 SUPERFAMILY SSF53756 6 315 5.24E-15 T 14-10-2018 JV59_38535 92ac879319d4e2e7a61d9e1669885325 500 SUPERFAMILY SSF55729 354 494 1.66E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_38535 92ac879319d4e2e7a61d9e1669885325 500 Pfam PF13302 Acetyltransferase (GNAT) domain 358 484 8.4E-12 T 14-10-2018 IPR000182 GNAT domain JV59_34965 b9b40de25008468e0d6d10eda9ea3802 764 SMART SM00073 6 103 9.3E-18 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 JV59_34965 b9b40de25008468e0d6d10eda9ea3802 764 SUPERFAMILY SSF55874 437 620 2.49E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_34965 b9b40de25008468e0d6d10eda9ea3802 764 SUPERFAMILY SSF50341 621 755 1.83E-28 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 JV59_34965 b9b40de25008468e0d6d10eda9ea3802 764 SUPERFAMILY SSF47226 6 127 6.8E-31 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_34965 b9b40de25008468e0d6d10eda9ea3802 764 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 576 6.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_34965 b9b40de25008468e0d6d10eda9ea3802 764 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 538 6.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_34965 b9b40de25008468e0d6d10eda9ea3802 764 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 600 6.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_34965 b9b40de25008468e0d6d10eda9ea3802 764 PRINTS PR00344 Bacterial sensor protein C-terminal signature 606 619 6.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_34965 b9b40de25008468e0d6d10eda9ea3802 764 Gene3D G3DSA:1.10.287.560 375 434 2.3E-19 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 JV59_34965 b9b40de25008468e0d6d10eda9ea3802 764 SUPERFAMILY SSF47384 376 435 6.28E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_34965 b9b40de25008468e0d6d10eda9ea3802 764 SMART SM00260 614 755 1.1E-33 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JV59_34965 b9b40de25008468e0d6d10eda9ea3802 764 Gene3D G3DSA:2.30.30.40 622 751 6.8E-34 T 14-10-2018 JV59_34965 b9b40de25008468e0d6d10eda9ea3802 764 Gene3D G3DSA:1.20.120.160 2 143 4.9E-37 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_34965 b9b40de25008468e0d6d10eda9ea3802 764 Pfam PF01584 CheW-like domain 628 757 1.4E-21 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JV59_34965 b9b40de25008468e0d6d10eda9ea3802 764 SMART SM00387 479 622 4.3E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_34965 b9b40de25008468e0d6d10eda9ea3802 764 ProSitePatterns PS00018 EF-hand calcium-binding domain. 219 231 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site JV59_34965 b9b40de25008468e0d6d10eda9ea3802 764 Gene3D G3DSA:3.30.565.10 435 621 1.4E-55 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_34965 b9b40de25008468e0d6d10eda9ea3802 764 Pfam PF01627 Hpt domain 8 100 8.7E-18 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 JV59_34965 b9b40de25008468e0d6d10eda9ea3802 764 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 375 434 3.0E-12 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 JV59_34965 b9b40de25008468e0d6d10eda9ea3802 764 Gene3D G3DSA:2.40.50.180 645 710 6.8E-34 T 14-10-2018 JV59_34965 b9b40de25008468e0d6d10eda9ea3802 764 SMART SM01231 374 434 1.7E-17 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 JV59_34965 b9b40de25008468e0d6d10eda9ea3802 764 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 482 621 1.4E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_36730 77534b550ce70e7953a0e3c0c52eae1f 344 Pfam PF00248 Aldo/keto reductase family 15 334 2.1E-74 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain JV59_36730 77534b550ce70e7953a0e3c0c52eae1f 344 Gene3D G3DSA:3.20.20.100 1 344 1.8E-132 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily JV59_36730 77534b550ce70e7953a0e3c0c52eae1f 344 SUPERFAMILY SSF51430 1 343 1.57E-107 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily JV59_38600 257120ad8f9d337193a1ec7d336ba15a 259 Gene3D G3DSA:3.90.550.20 76 228 3.9E-14 T 14-10-2018 JV59_38600 257120ad8f9d337193a1ec7d336ba15a 259 SUPERFAMILY SSF53448 18 257 2.44E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_38600 257120ad8f9d337193a1ec7d336ba15a 259 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 71 154 7.8E-13 T 14-10-2018 IPR007577 Glycosyltransferase, DXD sugar-binding motif JV59_29150 b5d722a5740406058fca0c4a7bd10e42 841 Gene3D G3DSA:3.40.50.2300 712 839 1.4E-32 T 14-10-2018 JV59_29150 b5d722a5740406058fca0c4a7bd10e42 841 SMART SM00448 722 832 1.2E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_29150 b5d722a5740406058fca0c4a7bd10e42 841 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 679 2.7E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_29150 b5d722a5740406058fca0c4a7bd10e42 841 SUPERFAMILY SSF55874 532 680 1.57E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_29150 b5d722a5740406058fca0c4a7bd10e42 841 Gene3D G3DSA:3.30.565.10 527 679 4.4E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_29150 b5d722a5740406058fca0c4a7bd10e42 841 SMART SM00387 573 682 1.9E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_29150 b5d722a5740406058fca0c4a7bd10e42 841 SUPERFAMILY SSF52172 722 836 6.4E-30 T 14-10-2018 IPR011006 CheY-like superfamily JV59_29150 b5d722a5740406058fca0c4a7bd10e42 841 Pfam PF00072 Response regulator receiver domain 724 832 2.9E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_29150 b5d722a5740406058fca0c4a7bd10e42 841 Gene3D G3DSA:1.10.287.130 465 526 4.4E-33 T 14-10-2018 JV59_29150 b5d722a5740406058fca0c4a7bd10e42 841 SUPERFAMILY SSF47384 455 517 6.47E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_29150 b5d722a5740406058fca0c4a7bd10e42 841 PRINTS PR00344 Bacterial sensor protein C-terminal signature 612 626 6.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_29150 b5d722a5740406058fca0c4a7bd10e42 841 PRINTS PR00344 Bacterial sensor protein C-terminal signature 666 679 6.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_29150 b5d722a5740406058fca0c4a7bd10e42 841 PRINTS PR00344 Bacterial sensor protein C-terminal signature 630 640 6.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_29150 b5d722a5740406058fca0c4a7bd10e42 841 PRINTS PR00344 Bacterial sensor protein C-terminal signature 642 660 6.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_35765 df8279a8fa9c697fe9d594f72cd7c000 161 Pfam PF01668 SmpB protein 15 157 4.3E-55 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 JV59_35765 df8279a8fa9c697fe9d594f72cd7c000 161 Gene3D G3DSA:2.40.280.10 7 136 2.7E-43 T 14-10-2018 IPR023620 Small protein B JV59_35765 df8279a8fa9c697fe9d594f72cd7c000 161 SUPERFAMILY SSF74982 8 139 2.09E-47 T 14-10-2018 IPR023620 Small protein B JV59_35765 df8279a8fa9c697fe9d594f72cd7c000 161 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 2.0E-66 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 JV59_35765 df8279a8fa9c697fe9d594f72cd7c000 161 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site JV59_35765 df8279a8fa9c697fe9d594f72cd7c000 161 Hamap MF_00023 SsrA-binding protein [smpB]. 1 161 68.417 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 JV59_35765 df8279a8fa9c697fe9d594f72cd7c000 161 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 5.5E-52 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 JV59_38005 72d9b0f16f728c2241c3cde60a8c4058 485 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 484 3.3E-226 T 14-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 JV59_38005 72d9b0f16f728c2241c3cde60a8c4058 485 Pfam PF00171 Aldehyde dehydrogenase family 9 458 9.4E-121 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JV59_38005 72d9b0f16f728c2241c3cde60a8c4058 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 55.752 T 14-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 JV59_38005 72d9b0f16f728c2241c3cde60a8c4058 485 Gene3D G3DSA:3.40.309.10 247 436 1.4E-140 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JV59_38005 72d9b0f16f728c2241c3cde60a8c4058 485 SUPERFAMILY SSF53720 2 449 3.53E-123 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JV59_38005 72d9b0f16f728c2241c3cde60a8c4058 485 Gene3D G3DSA:3.40.605.10 7 448 1.4E-140 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JV59_38005 72d9b0f16f728c2241c3cde60a8c4058 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 JV59_38005 72d9b0f16f728c2241c3cde60a8c4058 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JV59_18350 4588e0a518d0246a88e48252399545fa 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.7E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_18350 4588e0a518d0246a88e48252399545fa 296 Gene3D G3DSA:3.40.190.290 91 289 5.2E-57 T 14-10-2018 JV59_18350 4588e0a518d0246a88e48252399545fa 296 SUPERFAMILY SSF46785 6 111 9.25E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_18350 4588e0a518d0246a88e48252399545fa 296 SUPERFAMILY SSF53850 90 292 2.9E-39 T 14-10-2018 JV59_18350 4588e0a518d0246a88e48252399545fa 296 Gene3D G3DSA:1.10.10.10 3 86 1.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_18350 4588e0a518d0246a88e48252399545fa 296 Pfam PF03466 LysR substrate binding domain 89 287 1.3E-34 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_38350 058f9ce50efc1300464667c7ef983dac 182 Pfam PF05036 Sporulation related domain 108 177 4.8E-14 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 JV59_38350 058f9ce50efc1300464667c7ef983dac 182 SUPERFAMILY SSF110997 108 178 6.02E-17 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 JV59_38350 058f9ce50efc1300464667c7ef983dac 182 Gene3D G3DSA:3.30.70.1070 101 180 6.7E-27 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 JV59_34745 7eac6fb944447b3bcbe684f26825b2b1 602 Pfam PF02743 Cache domain 36 272 1.0E-15 T 14-10-2018 IPR033479 Double Cache domain 1 JV59_34745 7eac6fb944447b3bcbe684f26825b2b1 602 Gene3D G3DSA:3.30.450.20 54 175 9.8E-86 T 14-10-2018 JV59_34745 7eac6fb944447b3bcbe684f26825b2b1 602 Gene3D G3DSA:3.30.450.20 41 280 9.8E-86 T 14-10-2018 JV59_34745 7eac6fb944447b3bcbe684f26825b2b1 602 Gene3D G3DSA:3.30.565.10 441 600 5.9E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_34745 7eac6fb944447b3bcbe684f26825b2b1 602 SMART SM00387 484 592 2.5E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_34745 7eac6fb944447b3bcbe684f26825b2b1 602 SMART SM00388 373 441 1.6E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_34745 7eac6fb944447b3bcbe684f26825b2b1 602 PIRSF PIRSF036431 1 599 2.4E-189 T 14-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) JV59_34745 7eac6fb944447b3bcbe684f26825b2b1 602 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 438 4.9E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_34745 7eac6fb944447b3bcbe684f26825b2b1 602 SUPERFAMILY SSF103190 49 186 7.65E-30 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JV59_34745 7eac6fb944447b3bcbe684f26825b2b1 602 Gene3D G3DSA:1.10.287.130 349 436 3.7E-21 T 14-10-2018 JV59_34745 7eac6fb944447b3bcbe684f26825b2b1 602 SUPERFAMILY SSF55874 438 592 4.98E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_34745 7eac6fb944447b3bcbe684f26825b2b1 602 SUPERFAMILY SSF47384 358 438 2.94E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_34745 7eac6fb944447b3bcbe684f26825b2b1 602 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 487 590 2.5E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_34745 7eac6fb944447b3bcbe684f26825b2b1 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 537 3.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_34745 7eac6fb944447b3bcbe684f26825b2b1 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 570 3.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_34745 7eac6fb944447b3bcbe684f26825b2b1 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 551 3.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_34745 7eac6fb944447b3bcbe684f26825b2b1 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 589 3.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_36575 78c38ca5cdb709b9e1d3af5a16c24fc3 329 SUPERFAMILY SSF51261 45 264 1.26E-52 T 14-10-2018 IPR011055 Duplicated hybrid motif JV59_36575 78c38ca5cdb709b9e1d3af5a16c24fc3 329 Pfam PF01551 Peptidase family M23 168 263 1.8E-29 T 14-10-2018 IPR016047 Peptidase M23 JV59_36575 78c38ca5cdb709b9e1d3af5a16c24fc3 329 Gene3D G3DSA:2.70.70.10 110 269 7.1E-41 T 14-10-2018 IPR011055 Duplicated hybrid motif JV59_20850 7be72f2f3c2a9a4e0fbe5ba172d6eb41 141 Gene3D G3DSA:3.90.1010.10 1 138 2.8E-46 T 14-10-2018 JV59_20850 7be72f2f3c2a9a4e0fbe5ba172d6eb41 141 Pfam PF02657 Fe-S metabolism associated domain 8 129 1.4E-40 T 14-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like JV59_20850 7be72f2f3c2a9a4e0fbe5ba172d6eb41 141 SUPERFAMILY SSF82649 3 134 5.23E-40 T 14-10-2018 JV59_18705 e7406e59e6a1178f44a93dc63913287d 520 SMART SM00091 8 75 0.0073 T 14-10-2018 IPR000014 PAS domain JV59_18705 e7406e59e6a1178f44a93dc63913287d 520 Gene3D G3DSA:1.10.287.950 192 519 2.5E-56 T 14-10-2018 JV59_18705 e7406e59e6a1178f44a93dc63913287d 520 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 331 484 2.0E-32 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_18705 e7406e59e6a1178f44a93dc63913287d 520 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 113 6.5E-12 T 14-10-2018 IPR000014 PAS domain JV59_18705 e7406e59e6a1178f44a93dc63913287d 520 SMART SM00283 257 518 3.5E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_18705 e7406e59e6a1178f44a93dc63913287d 520 SUPERFAMILY SSF58104 263 518 1.74E-60 T 14-10-2018 JV59_18705 e7406e59e6a1178f44a93dc63913287d 520 SUPERFAMILY SSF55785 20 114 4.89E-25 T 14-10-2018 IPR035965 PAS domain superfamily JV59_18705 e7406e59e6a1178f44a93dc63913287d 520 Gene3D G3DSA:3.30.450.20 3 120 3.0E-24 T 14-10-2018 JV59_18705 e7406e59e6a1178f44a93dc63913287d 520 Pfam PF08447 PAS fold 31 114 1.6E-12 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 JV59_37900 b31e1053967a7de8f847d99ce8f56d74 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 14-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37900 b31e1053967a7de8f847d99ce8f56d74 100 Pfam PF00276 Ribosomal protein L23 9 95 1.7E-31 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 JV59_37900 b31e1053967a7de8f847d99ce8f56d74 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.535 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 JV59_37900 b31e1053967a7de8f847d99ce8f56d74 100 Gene3D G3DSA:3.30.70.330 1 100 5.0E-38 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily JV59_37900 b31e1053967a7de8f847d99ce8f56d74 100 SUPERFAMILY SSF54189 6 97 2.88E-32 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_36545 f23df13c53920d52e61a99dce234fdb9 781 Pfam PF00990 Diguanylate cyclase, GGDEF domain 339 501 2.3E-36 T 14-10-2018 IPR000160 GGDEF domain JV59_36545 f23df13c53920d52e61a99dce234fdb9 781 SUPERFAMILY SSF55073 343 507 9.42E-38 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_36545 f23df13c53920d52e61a99dce234fdb9 781 Gene3D G3DSA:3.20.20.450 518 765 6.3E-72 T 14-10-2018 IPR035919 EAL domain superfamily JV59_36545 f23df13c53920d52e61a99dce234fdb9 781 SMART SM00052 515 758 3.8E-74 T 14-10-2018 IPR001633 EAL domain JV59_36545 f23df13c53920d52e61a99dce234fdb9 781 Gene3D G3DSA:1.20.1480.50 245 334 1.9E-5 T 14-10-2018 JV59_36545 f23df13c53920d52e61a99dce234fdb9 781 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 336 503 1.7E-31 T 14-10-2018 IPR000160 GGDEF domain JV59_36545 f23df13c53920d52e61a99dce234fdb9 781 Pfam PF00563 EAL domain 519 753 3.2E-62 T 14-10-2018 IPR001633 EAL domain JV59_36545 f23df13c53920d52e61a99dce234fdb9 781 SUPERFAMILY SSF141868 520 760 6.67E-68 T 14-10-2018 IPR035919 EAL domain superfamily JV59_36545 f23df13c53920d52e61a99dce234fdb9 781 SMART SM00267 327 505 5.9E-41 T 14-10-2018 IPR000160 GGDEF domain JV59_36545 f23df13c53920d52e61a99dce234fdb9 781 Gene3D G3DSA:3.30.70.270 335 517 1.6E-46 T 14-10-2018 JV59_07060 e991e17588eadaad65cc5db592061a21 287 TIGRFAM TIGR04179 rhombo_lipo: rhombotail lipoprotein 14 265 4.2E-94 T 14-10-2018 IPR026443 Rhombotail lipoprotein JV59_07060 e991e17588eadaad65cc5db592061a21 287 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 247 267 0.001 T 14-10-2018 IPR020008 GlyGly-CTERM domain JV59_31405 546e672eaa2b4f3dab88cc1ebe67aeec 405 TIGRFAM TIGR00492 alr: alanine racemase 43 404 6.2E-69 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_31405 546e672eaa2b4f3dab88cc1ebe67aeec 405 SUPERFAMILY SSF51419 47 279 2.88E-46 T 14-10-2018 IPR029066 PLP-binding barrel JV59_31405 546e672eaa2b4f3dab88cc1ebe67aeec 405 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 71 81 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_31405 546e672eaa2b4f3dab88cc1ebe67aeec 405 Gene3D G3DSA:3.20.20.10 49 264 4.5E-128 T 14-10-2018 IPR029066 PLP-binding barrel JV59_31405 546e672eaa2b4f3dab88cc1ebe67aeec 405 Pfam PF00842 Alanine racemase, C-terminal domain 277 403 1.4E-32 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_31405 546e672eaa2b4f3dab88cc1ebe67aeec 405 SMART SM01005 276 404 5.5E-48 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_31405 546e672eaa2b4f3dab88cc1ebe67aeec 405 Pfam PF01168 Alanine racemase, N-terminal domain 47 268 5.9E-47 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_31405 546e672eaa2b4f3dab88cc1ebe67aeec 405 SUPERFAMILY SSF50621 269 404 1.26E-40 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 JV59_31405 546e672eaa2b4f3dab88cc1ebe67aeec 405 Hamap MF_01201 Alanine racemase. 40 404 26.541 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_31405 546e672eaa2b4f3dab88cc1ebe67aeec 405 PRINTS PR00992 Alanine racemase signature 309 324 2.9E-32 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_31405 546e672eaa2b4f3dab88cc1ebe67aeec 405 PRINTS PR00992 Alanine racemase signature 162 174 2.9E-32 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_31405 546e672eaa2b4f3dab88cc1ebe67aeec 405 PRINTS PR00992 Alanine racemase signature 241 268 2.9E-32 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_31405 546e672eaa2b4f3dab88cc1ebe67aeec 405 PRINTS PR00992 Alanine racemase signature 198 209 2.9E-32 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_31405 546e672eaa2b4f3dab88cc1ebe67aeec 405 PRINTS PR00992 Alanine racemase signature 102 120 2.9E-32 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_31405 546e672eaa2b4f3dab88cc1ebe67aeec 405 PRINTS PR00992 Alanine racemase signature 66 82 2.9E-32 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_31405 546e672eaa2b4f3dab88cc1ebe67aeec 405 PRINTS PR00992 Alanine racemase signature 330 347 2.9E-32 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_31405 546e672eaa2b4f3dab88cc1ebe67aeec 405 Gene3D G3DSA:2.40.37.10 43 400 4.5E-128 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 JV59_21810 5b62af1bad77b7bb99a19afa64ab9b06 301 Gene3D G3DSA:1.20.81.30 124 238 1.2E-6 T 14-10-2018 JV59_21810 5b62af1bad77b7bb99a19afa64ab9b06 301 Pfam PF00482 Type II secretion system (T2SS), protein F 134 256 1.3E-20 T 14-10-2018 IPR018076 Type II secretion system F domain JV59_20000 fd4e4a8668b0458347c94b6efcf7970a 395 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 4 387 2.8E-183 T 14-10-2018 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 JV59_20000 fd4e4a8668b0458347c94b6efcf7970a 395 SUPERFAMILY SSF52540 42 273 3.37E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_20000 fd4e4a8668b0458347c94b6efcf7970a 395 Gene3D G3DSA:3.40.50.300 31 327 4.2E-71 T 14-10-2018 JV59_20000 fd4e4a8668b0458347c94b6efcf7970a 395 Pfam PF00005 ABC transporter 43 195 1.3E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_20000 fd4e4a8668b0458347c94b6efcf7970a 395 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_20000 fd4e4a8668b0458347c94b6efcf7970a 395 SMART SM00382 52 253 8.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_20000 fd4e4a8668b0458347c94b6efcf7970a 395 SUPERFAMILY SSF54631 328 388 4.59E-5 T 14-10-2018 JV59_39210 6c1f1e05766eb827cb9139c36dd223ea 688 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 549 5.3E-204 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JV59_39210 6c1f1e05766eb827cb9139c36dd223ea 688 SMART SM00836 583 686 0.0026 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 JV59_39210 6c1f1e05766eb827cb9139c36dd223ea 688 SUPERFAMILY SSF109604 351 488 7.22E-12 T 14-10-2018 JV59_39210 6c1f1e05766eb827cb9139c36dd223ea 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 1.9E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JV59_39210 6c1f1e05766eb827cb9139c36dd223ea 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 1.9E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JV59_39210 6c1f1e05766eb827cb9139c36dd223ea 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 1.9E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JV59_39210 6c1f1e05766eb827cb9139c36dd223ea 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.9E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JV59_39210 6c1f1e05766eb827cb9139c36dd223ea 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 1.9E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JV59_39210 6c1f1e05766eb827cb9139c36dd223ea 688 Pfam PF05746 DALR anticodon binding domain 580 677 2.0E-10 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 JV59_39210 6c1f1e05766eb827cb9139c36dd223ea 688 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 687 5.3E-291 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JV59_39210 6c1f1e05766eb827cb9139c36dd223ea 688 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 686 25.742 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JV59_01485 13ca04df1b03101d74ec03f7db427999 476 PIRSF PIRSF000350 1 468 4.4E-82 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 JV59_01485 13ca04df1b03101d74ec03f7db427999 476 SUPERFAMILY SSF55424 343 466 7.04E-39 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JV59_01485 13ca04df1b03101d74ec03f7db427999 476 Gene3D G3DSA:3.50.50.60 150 271 1.3E-121 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_01485 13ca04df1b03101d74ec03f7db427999 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 2.4E-68 T 14-10-2018 JV59_01485 13ca04df1b03101d74ec03f7db427999 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 2.4E-68 T 14-10-2018 JV59_01485 13ca04df1b03101d74ec03f7db427999 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 2.4E-68 T 14-10-2018 JV59_01485 13ca04df1b03101d74ec03f7db427999 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 2.4E-68 T 14-10-2018 JV59_01485 13ca04df1b03101d74ec03f7db427999 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 2.4E-68 T 14-10-2018 JV59_01485 13ca04df1b03101d74ec03f7db427999 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.4E-68 T 14-10-2018 JV59_01485 13ca04df1b03101d74ec03f7db427999 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 2.4E-68 T 14-10-2018 JV59_01485 13ca04df1b03101d74ec03f7db427999 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 2.4E-68 T 14-10-2018 JV59_01485 13ca04df1b03101d74ec03f7db427999 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 2.4E-68 T 14-10-2018 JV59_01485 13ca04df1b03101d74ec03f7db427999 476 Gene3D G3DSA:3.30.390.30 346 467 4.5E-45 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JV59_01485 13ca04df1b03101d74ec03f7db427999 476 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 1.1E-64 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JV59_01485 13ca04df1b03101d74ec03f7db427999 476 Gene3D G3DSA:3.50.50.60 9 332 1.3E-121 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_01485 13ca04df1b03101d74ec03f7db427999 476 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 9.1E-150 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 JV59_01485 13ca04df1b03101d74ec03f7db427999 476 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 1.8E-35 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 JV59_01485 13ca04df1b03101d74ec03f7db427999 476 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 JV59_01485 13ca04df1b03101d74ec03f7db427999 476 SUPERFAMILY SSF51905 3 338 3.96E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_01485 13ca04df1b03101d74ec03f7db427999 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 1.0E-40 T 14-10-2018 JV59_01485 13ca04df1b03101d74ec03f7db427999 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 1.0E-40 T 14-10-2018 JV59_01485 13ca04df1b03101d74ec03f7db427999 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 1.0E-40 T 14-10-2018 JV59_01485 13ca04df1b03101d74ec03f7db427999 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.0E-40 T 14-10-2018 JV59_01485 13ca04df1b03101d74ec03f7db427999 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 1.0E-40 T 14-10-2018 JV59_34160 2b2eca87ad638cdd24fed334232d5d74 301 SMART SM01049 18 121 1.1 T 14-10-2018 IPR033480 Single Cache domain 2 JV59_34160 2b2eca87ad638cdd24fed334232d5d74 301 SMART SM01049 170 249 0.0011 T 14-10-2018 IPR033480 Single Cache domain 2 JV59_34160 2b2eca87ad638cdd24fed334232d5d74 301 Pfam PF08269 Cache domain 67 296 2.4E-19 T 14-10-2018 IPR004010 Double Cache domain 2 JV59_34160 2b2eca87ad638cdd24fed334232d5d74 301 Gene3D G3DSA:3.30.450.20 171 301 2.2E-16 T 14-10-2018 JV59_34160 2b2eca87ad638cdd24fed334232d5d74 301 Gene3D G3DSA:3.30.450.20 24 169 1.4E-11 T 14-10-2018 JV59_22035 56d43af2ca78a4ceabdcac159b95aafd 215 Gene3D G3DSA:3.40.50.10490 63 215 3.3E-17 T 14-10-2018 JV59_22035 56d43af2ca78a4ceabdcac159b95aafd 215 SUPERFAMILY SSF46689 2 68 6.27E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_22035 56d43af2ca78a4ceabdcac159b95aafd 215 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 66 7.0E-11 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 JV59_22035 56d43af2ca78a4ceabdcac159b95aafd 215 Gene3D G3DSA:1.10.10.10 1 62 1.4E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_22035 56d43af2ca78a4ceabdcac159b95aafd 215 SUPERFAMILY SSF53697 72 205 3.06E-19 T 14-10-2018 JV59_36595 9f18d8f286a5954b06fbec0110b8c4d6 240 SMART SM00850 144 238 1.2E-27 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 JV59_36595 9f18d8f286a5954b06fbec0110b8c4d6 240 Gene3D G3DSA:2.40.50.1020 141 239 8.8E-12 T 14-10-2018 JV59_36595 9f18d8f286a5954b06fbec0110b8c4d6 240 Pfam PF04397 LytTr DNA-binding domain 145 237 1.0E-24 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 JV59_36595 9f18d8f286a5954b06fbec0110b8c4d6 240 Pfam PF00072 Response regulator receiver domain 5 112 8.2E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_36595 9f18d8f286a5954b06fbec0110b8c4d6 240 SMART SM00448 2 112 3.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_36595 9f18d8f286a5954b06fbec0110b8c4d6 240 SUPERFAMILY SSF52172 1 121 2.56E-30 T 14-10-2018 IPR011006 CheY-like superfamily JV59_36595 9f18d8f286a5954b06fbec0110b8c4d6 240 Gene3D G3DSA:3.40.50.2300 1 130 3.4E-31 T 14-10-2018 JV59_01040 c8f01b0512193106fef8dc26929c21ad 165 Hamap MF_00746 Protein SprT [sprT]. 7 160 40.94 T 14-10-2018 IPR023483 Uncharacterised protein family SprT JV59_01040 c8f01b0512193106fef8dc26929c21ad 165 Pfam PF17283 SprT-like zinc ribbon domain 120 160 6.6E-11 T 14-10-2018 IPR035240 SprT-like, zinc ribbon domain JV59_01040 c8f01b0512193106fef8dc26929c21ad 165 Pfam PF10263 SprT-like family 21 114 7.3E-18 T 14-10-2018 IPR006640 SprT-like JV59_01040 c8f01b0512193106fef8dc26929c21ad 165 SMART SM00731 11 160 8.3E-55 T 14-10-2018 IPR006640 SprT-like JV59_31840 f1b7e3f734af0767ff0b0d811ca823cd 158 SUPERFAMILY SSF55729 1 148 2.29E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_31840 f1b7e3f734af0767ff0b0d811ca823cd 158 Pfam PF00583 Acetyltransferase (GNAT) family 31 146 2.5E-17 T 14-10-2018 IPR000182 GNAT domain JV59_31840 f1b7e3f734af0767ff0b0d811ca823cd 158 Gene3D G3DSA:3.40.630.30 5 137 1.8E-32 T 14-10-2018 JV59_26875 4c67626ab8e4166930a6b5c1351a7b3d 280 SUPERFAMILY SSF46934 3 53 3.4E-18 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 JV59_26875 4c67626ab8e4166930a6b5c1351a7b3d 280 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JV59_26875 4c67626ab8e4166930a6b5c1351a7b3d 280 Hamap MF_00050 Elongation factor Ts [tsf]. 1 279 75.524 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JV59_26875 4c67626ab8e4166930a6b5c1351a7b3d 280 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JV59_26875 4c67626ab8e4166930a6b5c1351a7b3d 280 Gene3D G3DSA:3.30.479.20 56 139 2.3E-26 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 JV59_26875 4c67626ab8e4166930a6b5c1351a7b3d 280 Pfam PF00889 Elongation factor TS 71 260 1.9E-61 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 JV59_26875 4c67626ab8e4166930a6b5c1351a7b3d 280 Gene3D G3DSA:1.10.286.20 184 223 2.4E-22 T 14-10-2018 JV59_26875 4c67626ab8e4166930a6b5c1351a7b3d 280 Gene3D G3DSA:1.10.8.10 1 55 2.0E-25 T 14-10-2018 JV59_26875 4c67626ab8e4166930a6b5c1351a7b3d 280 SUPERFAMILY SSF54713 55 137 1.96E-17 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 JV59_26875 4c67626ab8e4166930a6b5c1351a7b3d 280 SUPERFAMILY SSF54713 141 279 4.71E-45 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 JV59_26875 4c67626ab8e4166930a6b5c1351a7b3d 280 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 279 8.5E-102 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JV59_02000 2d36101e18214e69c952629aa3f409d9 122 Pfam PF02021 Uncharacterised protein family UPF0102 13 104 4.9E-26 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 JV59_02000 2d36101e18214e69c952629aa3f409d9 122 SUPERFAMILY SSF52980 7 112 1.5E-19 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JV59_02000 2d36101e18214e69c952629aa3f409d9 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 6 120 4.2E-37 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 JV59_02000 2d36101e18214e69c952629aa3f409d9 122 Gene3D G3DSA:3.40.1350.10 13 122 1.4E-30 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 JV59_02000 2d36101e18214e69c952629aa3f409d9 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 118 23.041 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 JV59_38875 29563035ac9bd048b60e00dd20df4b84 217 SUPERFAMILY SSF54523 44 205 2.67E-54 T 14-10-2018 JV59_38875 29563035ac9bd048b60e00dd20df4b84 217 Gene3D G3DSA:2.10.70.20 157 206 7.7E-16 T 14-10-2018 JV59_38875 29563035ac9bd048b60e00dd20df4b84 217 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 33 1.5E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_38875 29563035ac9bd048b60e00dd20df4b84 217 Gene3D G3DSA:3.10.610.10 42 155 5.1E-33 T 14-10-2018 JV59_38875 29563035ac9bd048b60e00dd20df4b84 217 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 11 202 3.9E-80 T 14-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 JV59_38875 29563035ac9bd048b60e00dd20df4b84 217 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 33 1.3E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_38875 29563035ac9bd048b60e00dd20df4b84 217 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_38875 29563035ac9bd048b60e00dd20df4b84 217 Pfam PF11612 Type II secretion system (T2SS), protein J 63 200 1.8E-37 T 14-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 JV59_34115 e7504cad27b06c0dcf6a8f9c18ed8f55 721 SUPERFAMILY SSF53474 453 700 1.73E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_34115 e7504cad27b06c0dcf6a8f9c18ed8f55 721 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 43 443 1.4E-97 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 JV59_34115 e7504cad27b06c0dcf6a8f9c18ed8f55 721 Gene3D G3DSA:3.40.50.1820 60 713 9.3E-250 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_34115 e7504cad27b06c0dcf6a8f9c18ed8f55 721 Pfam PF00326 Prolyl oligopeptidase family 505 720 1.7E-67 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 JV59_34115 e7504cad27b06c0dcf6a8f9c18ed8f55 721 Gene3D G3DSA:2.130.10.120 111 445 9.3E-250 T 14-10-2018 JV59_34115 e7504cad27b06c0dcf6a8f9c18ed8f55 721 SUPERFAMILY SSF50993 39 451 3.4E-94 T 14-10-2018 JV59_34115 e7504cad27b06c0dcf6a8f9c18ed8f55 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 630 645 1.9E-50 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 JV59_34115 e7504cad27b06c0dcf6a8f9c18ed8f55 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 542 561 1.9E-50 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 JV59_34115 e7504cad27b06c0dcf6a8f9c18ed8f55 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 648 670 1.9E-50 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 JV59_34115 e7504cad27b06c0dcf6a8f9c18ed8f55 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 488 506 1.9E-50 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 JV59_34115 e7504cad27b06c0dcf6a8f9c18ed8f55 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 514 538 1.9E-50 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 JV59_34115 e7504cad27b06c0dcf6a8f9c18ed8f55 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 572 592 1.9E-50 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 JV59_31315 c5d5871ca08ff1cbbcaf1a61dd33d2fc 337 SUPERFAMILY SSF140591 260 336 3.77E-15 T 14-10-2018 JV59_31315 c5d5871ca08ff1cbbcaf1a61dd33d2fc 337 Pfam PF07201 HrpJ-like domain 44 197 3.9E-14 T 14-10-2018 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 JV59_31315 c5d5871ca08ff1cbbcaf1a61dd33d2fc 337 Pfam PF09059 TyeA 264 334 1.2E-7 T 14-10-2018 IPR015144 Type III secretion system effector delivery regulator TyeA JV59_31315 c5d5871ca08ff1cbbcaf1a61dd33d2fc 337 TIGRFAM TIGR02511 type_III_tyeA: type III secretion effector delivery regulator, TyeA family 262 334 2.9E-7 T 14-10-2018 IPR013351 Type III secretion system effector delivery regulator TyeA-related JV59_31315 c5d5871ca08ff1cbbcaf1a61dd33d2fc 337 Gene3D G3DSA:1.20.1280.80 257 336 2.4E-6 T 14-10-2018 IPR038347 TyeA superfamily JV59_35355 acf182e0a58a9dd9e2349b97d759983e 377 Pfam PF07687 Peptidase dimerisation domain 177 284 1.2E-22 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain JV59_35355 acf182e0a58a9dd9e2349b97d759983e 377 Gene3D G3DSA:3.30.70.360 181 294 2.4E-125 T 14-10-2018 JV59_35355 acf182e0a58a9dd9e2349b97d759983e 377 Gene3D G3DSA:3.40.630.10 9 364 2.4E-125 T 14-10-2018 JV59_35355 acf182e0a58a9dd9e2349b97d759983e 377 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 JV59_35355 acf182e0a58a9dd9e2349b97d759983e 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 51.759 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 JV59_35355 acf182e0a58a9dd9e2349b97d759983e 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 2.4E-177 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 JV59_35355 acf182e0a58a9dd9e2349b97d759983e 377 SUPERFAMILY SSF55031 181 291 1.64E-28 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain JV59_35355 acf182e0a58a9dd9e2349b97d759983e 377 SUPERFAMILY SSF53187 6 376 1.48E-65 T 14-10-2018 JV59_35355 acf182e0a58a9dd9e2349b97d759983e 377 Pfam PF01546 Peptidase family M20/M25/M40 64 374 1.9E-45 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 JV59_40110 91c312e166dfcf1a82047c9645f47a57 199 PIRSF PIRSF004553 18 198 5.0E-55 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 JV59_40110 91c312e166dfcf1a82047c9645f47a57 199 SUPERFAMILY SSF53335 19 195 2.49E-54 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_40110 91c312e166dfcf1a82047c9645f47a57 199 Gene3D G3DSA:3.40.50.150 6 199 3.6E-63 T 14-10-2018 JV59_40110 91c312e166dfcf1a82047c9645f47a57 199 Pfam PF03602 Conserved hypothetical protein 95 19 194 3.9E-61 T 14-10-2018 JV59_40110 91c312e166dfcf1a82047c9645f47a57 199 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 17 196 1.0E-60 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 JV59_23720 7922169635e4887b26152c136a6db301 312 Gene3D G3DSA:2.120.10.30 161 312 1.3E-13 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like JV59_23720 7922169635e4887b26152c136a6db301 312 SUPERFAMILY SSF63825 37 181 2.46E-5 T 14-10-2018 JV59_23720 7922169635e4887b26152c136a6db301 312 SUPERFAMILY SSF63825 160 301 6.02E-11 T 14-10-2018 JV59_37840 f35bcef3ea58cb0f73b39db75f63c740 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.585 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 JV59_37840 f35bcef3ea58cb0f73b39db75f63c740 177 Gene3D G3DSA:3.90.930.12 1 82 6.2E-31 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37840 f35bcef3ea58cb0f73b39db75f63c740 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.5E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 JV59_37840 f35bcef3ea58cb0f73b39db75f63c740 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.5E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 JV59_37840 f35bcef3ea58cb0f73b39db75f63c740 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.5E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 JV59_37840 f35bcef3ea58cb0f73b39db75f63c740 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_37840 f35bcef3ea58cb0f73b39db75f63c740 177 PIRSF PIRSF002162 1 177 2.8E-45 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37840 f35bcef3ea58cb0f73b39db75f63c740 177 SUPERFAMILY SSF56053 83 177 1.14E-35 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37840 f35bcef3ea58cb0f73b39db75f63c740 177 Gene3D G3DSA:3.90.930.12 83 177 2.4E-39 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37840 f35bcef3ea58cb0f73b39db75f63c740 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.9E-74 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 JV59_37840 f35bcef3ea58cb0f73b39db75f63c740 177 SUPERFAMILY SSF56053 1 82 1.18E-24 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37840 f35bcef3ea58cb0f73b39db75f63c740 177 Pfam PF00347 Ribosomal protein L6 91 164 1.3E-18 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37840 f35bcef3ea58cb0f73b39db75f63c740 177 Pfam PF00347 Ribosomal protein L6 11 82 3.5E-20 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_01685 96556e694f02d259d53a4d60ca08f1e2 1037 Gene3D G3DSA:3.30.70.1320 135 327 3.0E-256 T 14-10-2018 JV59_01685 96556e694f02d259d53a4d60ca08f1e2 1037 Gene3D G3DSA:1.20.1640.10 510 1018 3.0E-256 T 14-10-2018 JV59_01685 96556e694f02d259d53a4d60ca08f1e2 1037 Gene3D G3DSA:3.30.2090.10 178 268 3.0E-256 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_01685 96556e694f02d259d53a4d60ca08f1e2 1037 SUPERFAMILY SSF82714 184 263 2.09E-11 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_01685 96556e694f02d259d53a4d60ca08f1e2 1037 Gene3D G3DSA:3.30.70.1430 565 651 3.0E-256 T 14-10-2018 JV59_01685 96556e694f02d259d53a4d60ca08f1e2 1037 Gene3D G3DSA:1.20.1640.10 11 509 3.0E-256 T 14-10-2018 JV59_01685 96556e694f02d259d53a4d60ca08f1e2 1037 SUPERFAMILY SSF82866 289 490 2.75E-41 T 14-10-2018 JV59_01685 96556e694f02d259d53a4d60ca08f1e2 1037 Pfam PF00873 AcrB/AcrD/AcrF family 5 1021 3.2E-167 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_01685 96556e694f02d259d53a4d60ca08f1e2 1037 Gene3D G3DSA:3.30.70.1440 652 849 3.0E-256 T 14-10-2018 JV59_01685 96556e694f02d259d53a4d60ca08f1e2 1037 SUPERFAMILY SSF82693 147 325 6.8E-12 T 14-10-2018 JV59_01685 96556e694f02d259d53a4d60ca08f1e2 1037 SUPERFAMILY SSF82866 791 1023 2.88E-50 T 14-10-2018 JV59_01685 96556e694f02d259d53a4d60ca08f1e2 1037 SUPERFAMILY SSF82693 41 133 4.97E-23 T 14-10-2018 JV59_01685 96556e694f02d259d53a4d60ca08f1e2 1037 Gene3D G3DSA:3.30.70.1430 41 799 3.0E-256 T 14-10-2018 JV59_01685 96556e694f02d259d53a4d60ca08f1e2 1037 Gene3D G3DSA:3.30.2090.10 703 791 3.0E-256 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_01685 96556e694f02d259d53a4d60ca08f1e2 1037 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 2.7E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_01685 96556e694f02d259d53a4d60ca08f1e2 1037 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 2.7E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_01685 96556e694f02d259d53a4d60ca08f1e2 1037 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 2.7E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_01685 96556e694f02d259d53a4d60ca08f1e2 1037 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 2.7E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_01685 96556e694f02d259d53a4d60ca08f1e2 1037 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 2.7E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_01685 96556e694f02d259d53a4d60ca08f1e2 1037 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 2.7E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_30210 72e4e99a7b8169783adb84937c89dd2f 458 Pfam PF01554 MatE 25 185 9.0E-26 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_30210 72e4e99a7b8169783adb84937c89dd2f 458 Pfam PF01554 MatE 252 413 2.2E-19 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_30210 72e4e99a7b8169783adb84937c89dd2f 458 PIRSF PIRSF006603 7 458 7.5E-65 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_30210 72e4e99a7b8169783adb84937c89dd2f 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 417 3.0E-64 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_27465 60495abe05129972c77a9b8825747911 363 Gene3D G3DSA:1.10.150.300 120 200 8.2E-152 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 JV59_27465 60495abe05129972c77a9b8825747911 363 Gene3D G3DSA:3.40.50.300 4 278 8.2E-152 T 14-10-2018 JV59_27465 60495abe05129972c77a9b8825747911 363 SUPERFAMILY SSF81271 279 360 5.67E-37 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 JV59_27465 60495abe05129972c77a9b8825747911 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.0E-170 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 JV59_27465 60495abe05129972c77a9b8825747911 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.357 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 JV59_27465 60495abe05129972c77a9b8825747911 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.9E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JV59_27465 60495abe05129972c77a9b8825747911 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.9E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JV59_27465 60495abe05129972c77a9b8825747911 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.9E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JV59_27465 60495abe05129972c77a9b8825747911 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.9E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JV59_27465 60495abe05129972c77a9b8825747911 363 SUPERFAMILY SSF52540 3 301 9.95E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_27465 60495abe05129972c77a9b8825747911 363 Gene3D G3DSA:3.10.20.30 48 362 8.2E-152 T 14-10-2018 IPR012675 Beta-grasp domain superfamily JV59_27465 60495abe05129972c77a9b8825747911 363 PIRSF PIRSF006641 1 363 1.5E-158 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 JV59_27465 60495abe05129972c77a9b8825747911 363 Pfam PF01926 50S ribosome-binding GTPase 5 121 5.9E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JV59_27465 60495abe05129972c77a9b8825747911 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.3E-39 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 JV59_29685 c4bb574d042a5a8fdc056ebadc1a92fc 359 Pfam PF03150 Di-haem cytochrome c peroxidase 81 224 2.3E-38 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 JV59_29685 c4bb574d042a5a8fdc056ebadc1a92fc 359 Gene3D G3DSA:1.10.760.10 80 224 2.4E-91 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_29685 c4bb574d042a5a8fdc056ebadc1a92fc 359 SUPERFAMILY SSF46626 211 353 7.44E-34 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_29685 c4bb574d042a5a8fdc056ebadc1a92fc 359 Pfam PF00034 Cytochrome c 233 338 2.2E-4 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_29685 c4bb574d042a5a8fdc056ebadc1a92fc 359 PIRSF PIRSF000294 40 355 1.5E-80 T 14-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 JV59_29685 c4bb574d042a5a8fdc056ebadc1a92fc 359 Gene3D G3DSA:1.10.760.10 78 350 2.4E-91 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_29685 c4bb574d042a5a8fdc056ebadc1a92fc 359 SUPERFAMILY SSF46626 68 211 4.04E-37 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_01830 e4bfdbc10acb6ca1641efe065a0f360d 151 SUPERFAMILY SSF75420 2 83 6.15E-26 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily JV59_01830 e4bfdbc10acb6ca1641efe065a0f360d 151 Pfam PF17384 RimP C-terminal SH3 domain 86 151 3.9E-20 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal JV59_01830 e4bfdbc10acb6ca1641efe065a0f360d 151 Pfam PF02576 RimP N-terminal domain 12 83 2.2E-29 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal JV59_01830 e4bfdbc10acb6ca1641efe065a0f360d 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.633 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 JV59_01830 e4bfdbc10acb6ca1641efe065a0f360d 151 Gene3D G3DSA:3.30.300.70 1 80 1.5E-26 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily JV59_01830 e4bfdbc10acb6ca1641efe065a0f360d 151 SUPERFAMILY SSF74942 84 151 5.89E-17 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily JV59_35495 de1c4a87da096cb6fab8c0e562389d5e 941 SUPERFAMILY SSF52518 122 532 9.57E-87 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_35495 de1c4a87da096cb6fab8c0e562389d5e 941 Gene3D G3DSA:3.40.50.12470 557 803 3.4E-173 T 14-10-2018 JV59_35495 de1c4a87da096cb6fab8c0e562389d5e 941 Pfam PF02779 Transketolase, pyrimidine binding domain 593 788 5.3E-66 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JV59_35495 de1c4a87da096cb6fab8c0e562389d5e 941 Gene3D G3DSA:3.40.50.11610 724 930 3.4E-173 T 14-10-2018 JV59_35495 de1c4a87da096cb6fab8c0e562389d5e 941 Gene3D G3DSA:3.40.50.970 168 534 8.9E-147 T 14-10-2018 JV59_35495 de1c4a87da096cb6fab8c0e562389d5e 941 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 933 2.1E-54 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 JV59_35495 de1c4a87da096cb6fab8c0e562389d5e 941 Pfam PF00676 Dehydrogenase E1 component 220 500 1.7E-49 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 JV59_35495 de1c4a87da096cb6fab8c0e562389d5e 941 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 JV59_35495 de1c4a87da096cb6fab8c0e562389d5e 941 Gene3D G3DSA:1.10.287.1150 85 167 5.4E-29 T 14-10-2018 JV59_35495 de1c4a87da096cb6fab8c0e562389d5e 941 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 6.7E-14 T 14-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 JV59_35495 de1c4a87da096cb6fab8c0e562389d5e 941 SUPERFAMILY SSF52518 577 794 3.34E-52 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_35495 de1c4a87da096cb6fab8c0e562389d5e 941 PIRSF PIRSF000157 1 935 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 JV59_35495 de1c4a87da096cb6fab8c0e562389d5e 941 SMART SM00861 594 787 1.1E-62 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JV59_01645 414f99b72a1c97dc94604d24cdaa6bfe 328 SUPERFAMILY SSF161098 93 324 1.03E-15 T 14-10-2018 IPR035906 MetI-like superfamily JV59_01645 414f99b72a1c97dc94604d24cdaa6bfe 328 Gene3D G3DSA:1.10.3720.10 88 327 8.1E-18 T 14-10-2018 IPR035906 MetI-like superfamily JV59_01645 414f99b72a1c97dc94604d24cdaa6bfe 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 325 4.1E-40 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_17590 6a8dd224f0ec35cf82c4bcf00fd1994d 186 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 127 162 9.8E-9 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_17590 6a8dd224f0ec35cf82c4bcf00fd1994d 186 SUPERFAMILY SSF51161 2 184 1.66E-44 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JV59_17590 6a8dd224f0ec35cf82c4bcf00fd1994d 186 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 136 164 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 JV59_17590 6a8dd224f0ec35cf82c4bcf00fd1994d 186 Gene3D G3DSA:2.160.10.10 1 185 1.4E-64 T 14-10-2018 JV59_17590 6a8dd224f0ec35cf82c4bcf00fd1994d 186 SMART SM01266 4 56 2.0E-7 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 JV59_17590 6a8dd224f0ec35cf82c4bcf00fd1994d 186 Pfam PF12464 Maltose acetyltransferase 6 52 2.7E-5 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 JV59_22830 2aac3fcd715979179eb640e7fcffd27a 125 SUPERFAMILY SSF55729 2 104 1.01E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_22830 2aac3fcd715979179eb640e7fcffd27a 125 Gene3D G3DSA:3.40.630.30 1 121 1.2E-25 T 14-10-2018 JV59_22830 2aac3fcd715979179eb640e7fcffd27a 125 Pfam PF13302 Acetyltransferase (GNAT) domain 3 101 9.0E-20 T 14-10-2018 IPR000182 GNAT domain JV59_31185 fc40016beb4933d70f02f28b4d8366a1 484 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 190 207 9.2E-38 T 14-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 JV59_31185 fc40016beb4933d70f02f28b4d8366a1 484 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 264 284 9.2E-38 T 14-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 JV59_31185 fc40016beb4933d70f02f28b4d8366a1 484 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 336 355 9.2E-38 T 14-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 JV59_31185 fc40016beb4933d70f02f28b4d8366a1 484 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 461 480 9.2E-38 T 14-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 JV59_31185 fc40016beb4933d70f02f28b4d8366a1 484 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 370 385 9.2E-38 T 14-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 JV59_31185 fc40016beb4933d70f02f28b4d8366a1 484 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 428 461 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 JV59_31185 fc40016beb4933d70f02f28b4d8366a1 484 Gene3D G3DSA:3.55.50.30 18 103 8.4E-23 T 14-10-2018 JV59_31185 fc40016beb4933d70f02f28b4d8366a1 484 Pfam PF00263 Bacterial type II and III secretion system protein 323 480 2.6E-36 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 JV59_31185 fc40016beb4933d70f02f28b4d8366a1 484 Gene3D G3DSA:3.30.1370.120 174 259 5.1E-14 T 14-10-2018 IPR038591 NolW-like superfamily JV59_31185 fc40016beb4933d70f02f28b4d8366a1 484 Pfam PF03958 Bacterial type II/III secretion system short domain 178 260 1.6E-15 T 14-10-2018 IPR005644 NolW-like JV59_31185 fc40016beb4933d70f02f28b4d8366a1 484 Gene3D G3DSA:3.30.1370.120 104 171 5.8E-12 T 14-10-2018 IPR038591 NolW-like superfamily JV59_31185 fc40016beb4933d70f02f28b4d8366a1 484 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 31 483 9.2E-154 T 14-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 JV59_39810 fd61e288f02a7b4e16a988a061fbed27 279 Gene3D G3DSA:3.40.50.150 1 279 1.1E-114 T 14-10-2018 JV59_39810 fd61e288f02a7b4e16a988a061fbed27 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JV59_39810 fd61e288f02a7b4e16a988a061fbed27 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.298 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 JV59_39810 fd61e288f02a7b4e16a988a061fbed27 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 1.5E-115 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 JV59_39810 fd61e288f02a7b4e16a988a061fbed27 279 SUPERFAMILY SSF53335 9 273 1.35E-95 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_36565 f6862012695677882d4d9f1a461b9737 555 Pfam PF00005 ABC transporter 340 473 1.0E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_36565 f6862012695677882d4d9f1a461b9737 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 1.2E-292 T 14-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 JV59_36565 f6862012695677882d4d9f1a461b9737 555 Gene3D G3DSA:3.40.50.300 286 555 1.9E-76 T 14-10-2018 JV59_36565 f6862012695677882d4d9f1a461b9737 555 SUPERFAMILY SSF52540 306 524 3.65E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_36565 f6862012695677882d4d9f1a461b9737 555 SUPERFAMILY SSF52540 9 243 4.55E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_36565 f6862012695677882d4d9f1a461b9737 555 Pfam PF00005 ABC transporter 22 191 8.2E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_36565 f6862012695677882d4d9f1a461b9737 555 Gene3D G3DSA:3.40.50.300 1 285 5.3E-86 T 14-10-2018 JV59_36565 f6862012695677882d4d9f1a461b9737 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_36565 f6862012695677882d4d9f1a461b9737 555 Pfam PF12848 ABC transporter 230 304 8.9E-13 T 14-10-2018 IPR032781 ABC-transporter extension domain JV59_36565 f6862012695677882d4d9f1a461b9737 555 SMART SM00382 348 518 1.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_36565 f6862012695677882d4d9f1a461b9737 555 SMART SM00382 31 236 4.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_34775 bced32ad5faba826253c9e12e516c099 371 Gene3D G3DSA:2.40.50.940 224 361 4.9E-30 T 14-10-2018 JV59_34775 bced32ad5faba826253c9e12e516c099 371 Pfam PF00005 ABC transporter 21 163 3.7E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_34775 bced32ad5faba826253c9e12e516c099 371 SUPERFAMILY SSF52540 4 246 8.87E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_34775 bced32ad5faba826253c9e12e516c099 371 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_34775 bced32ad5faba826253c9e12e516c099 371 SMART SM00382 30 213 1.1E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_34775 bced32ad5faba826253c9e12e516c099 371 Gene3D G3DSA:3.40.50.300 3 223 8.4E-71 T 14-10-2018 JV59_34775 bced32ad5faba826253c9e12e516c099 371 SUPERFAMILY SSF50331 238 368 6.59E-24 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal JV59_34775 bced32ad5faba826253c9e12e516c099 371 Gene3D G3DSA:2.40.50.140 293 352 4.9E-30 T 14-10-2018 JV59_26270 1c431dac6ece36474991525f9f1d91d0 450 Gene3D G3DSA:3.30.70.260 310 383 1.0E-48 T 14-10-2018 JV59_26270 1c431dac6ece36474991525f9f1d91d0 450 SUPERFAMILY SSF53633 5 293 3.53E-77 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JV59_26270 1c431dac6ece36474991525f9f1d91d0 450 SUPERFAMILY SSF55021 298 393 2.54E-18 T 14-10-2018 JV59_26270 1c431dac6ece36474991525f9f1d91d0 450 SUPERFAMILY SSF55021 375 449 1.55E-16 T 14-10-2018 JV59_26270 1c431dac6ece36474991525f9f1d91d0 450 Gene3D G3DSA:3.40.1160.10 6 290 1.5E-100 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JV59_26270 1c431dac6ece36474991525f9f1d91d0 450 Gene3D G3DSA:3.30.70.260 304 447 1.0E-48 T 14-10-2018 JV59_26270 1c431dac6ece36474991525f9f1d91d0 450 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JV59_26270 1c431dac6ece36474991525f9f1d91d0 450 PIRSF PIRSF000726 3 450 4.3E-130 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JV59_26270 1c431dac6ece36474991525f9f1d91d0 450 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 6 449 3.0E-123 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JV59_26270 1c431dac6ece36474991525f9f1d91d0 450 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 6 449 1.2E-122 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JV59_26270 1c431dac6ece36474991525f9f1d91d0 450 Pfam PF00696 Amino acid kinase family 5 278 4.8E-50 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 JV59_26270 1c431dac6ece36474991525f9f1d91d0 450 Gene3D G3DSA:1.20.120.1320 42 135 1.5E-100 T 14-10-2018 JV59_16245 0f30325f84bc315eab5fce49a140fb00 394 SUPERFAMILY SSF56601 1 275 3.13E-86 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JV59_16245 0f30325f84bc315eab5fce49a140fb00 394 SMART SM00936 275 365 1.5E-19 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JV59_16245 0f30325f84bc315eab5fce49a140fb00 394 Gene3D G3DSA:2.60.410.10 275 365 2.4E-23 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JV59_16245 0f30325f84bc315eab5fce49a140fb00 394 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 275 360 1.9E-17 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JV59_16245 0f30325f84bc315eab5fce49a140fb00 394 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 58 69 3.9E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JV59_16245 0f30325f84bc315eab5fce49a140fb00 394 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 114 131 3.9E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JV59_16245 0f30325f84bc315eab5fce49a140fb00 394 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 141 154 3.9E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JV59_16245 0f30325f84bc315eab5fce49a140fb00 394 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 24 254 1.0E-88 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 JV59_16245 0f30325f84bc315eab5fce49a140fb00 394 SUPERFAMILY SSF69189 275 366 4.32E-19 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JV59_16245 0f30325f84bc315eab5fce49a140fb00 394 Gene3D G3DSA:3.40.710.10 15 273 3.2E-91 T 14-10-2018 JV59_29160 1da38e62a4306dba4c56bc90cd8256c9 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.9E-33 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JV59_29160 1da38e62a4306dba4c56bc90cd8256c9 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.491 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 JV59_29160 1da38e62a4306dba4c56bc90cd8256c9 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.4E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JV59_29160 1da38e62a4306dba4c56bc90cd8256c9 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.4E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JV59_29160 1da38e62a4306dba4c56bc90cd8256c9 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.4E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JV59_29160 1da38e62a4306dba4c56bc90cd8256c9 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 95 1.6E-49 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 JV59_29160 1da38e62a4306dba4c56bc90cd8256c9 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 JV59_29160 1da38e62a4306dba4c56bc90cd8256c9 98 SUPERFAMILY SSF47729 3 95 4.71E-33 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 JV59_29160 1da38e62a4306dba4c56bc90cd8256c9 98 Gene3D G3DSA:4.10.520.10 1 97 1.9E-38 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 JV59_29160 1da38e62a4306dba4c56bc90cd8256c9 98 SMART SM00411 3 92 2.0E-43 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JV59_33925 a49f1c3442044b9e9a5b2ebce1310d81 279 Pfam PF07840 FadR C-terminal domain 72 274 2.5E-68 T 14-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 JV59_33925 a49f1c3442044b9e9a5b2ebce1310d81 279 Gene3D G3DSA:1.20.120.530 80 151 5.6E-7 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JV59_33925 a49f1c3442044b9e9a5b2ebce1310d81 279 Gene3D G3DSA:1.20.120.530 152 278 4.2E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JV59_33925 a49f1c3442044b9e9a5b2ebce1310d81 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 6.8E-116 T 14-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 JV59_33925 a49f1c3442044b9e9a5b2ebce1310d81 279 SUPERFAMILY SSF46785 12 74 1.64E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_33925 a49f1c3442044b9e9a5b2ebce1310d81 279 SMART SM00345 12 71 2.0E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_33925 a49f1c3442044b9e9a5b2ebce1310d81 279 SUPERFAMILY SSF48008 79 270 2.09E-57 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JV59_33925 a49f1c3442044b9e9a5b2ebce1310d81 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_33925 a49f1c3442044b9e9a5b2ebce1310d81 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_33925 a49f1c3442044b9e9a5b2ebce1310d81 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.4E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_33925 a49f1c3442044b9e9a5b2ebce1310d81 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 137.545 T 14-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 JV59_33925 a49f1c3442044b9e9a5b2ebce1310d81 279 Gene3D G3DSA:1.10.10.10 1 79 2.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_20900 ee161ac9f2f8a331c6c8f8cfb2355376 217 Pfam PF00805 Pentapeptide repeats (8 copies) 173 198 0.0033 T 14-10-2018 IPR001646 Pentapeptide repeat JV59_20900 ee161ac9f2f8a331c6c8f8cfb2355376 217 Pfam PF00805 Pentapeptide repeats (8 copies) 119 137 0.0084 T 14-10-2018 IPR001646 Pentapeptide repeat JV59_20900 ee161ac9f2f8a331c6c8f8cfb2355376 217 Gene3D G3DSA:2.160.20.80 2 217 2.5E-65 T 14-10-2018 JV59_20900 ee161ac9f2f8a331c6c8f8cfb2355376 217 SUPERFAMILY SSF141571 54 215 2.26E-39 T 14-10-2018 JV59_20900 ee161ac9f2f8a331c6c8f8cfb2355376 217 SUPERFAMILY SSF141571 3 51 2.75E-9 T 14-10-2018 JV59_20900 ee161ac9f2f8a331c6c8f8cfb2355376 217 Pfam PF13599 Pentapeptide repeats (9 copies) 26 104 1.8E-12 T 14-10-2018 IPR001646 Pentapeptide repeat JV59_31990 b4e5ad4334dcd96f9514863cf0f4378e 323 Gene3D G3DSA:3.40.190.10 123 249 4.9E-59 T 14-10-2018 JV59_31990 b4e5ad4334dcd96f9514863cf0f4378e 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 65 320 9.3E-27 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 JV59_31990 b4e5ad4334dcd96f9514863cf0f4378e 323 Gene3D G3DSA:3.40.190.150 29 314 4.9E-59 T 14-10-2018 JV59_31990 b4e5ad4334dcd96f9514863cf0f4378e 323 PIRSF PIRSF017082 2 323 1.4E-83 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 JV59_31990 b4e5ad4334dcd96f9514863cf0f4378e 323 SUPERFAMILY SSF53850 104 289 1.04E-8 T 14-10-2018 JV59_34065 510f80ce693587b07b5a4b5f52040138 680 Gene3D G3DSA:2.120.10.30 59 284 1.2E-24 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like JV59_34065 510f80ce693587b07b5a4b5f52040138 680 Gene3D G3DSA:2.120.10.30 537 680 8.3E-24 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like JV59_34065 510f80ce693587b07b5a4b5f52040138 680 Gene3D G3DSA:2.120.10.30 485 536 1.8E-7 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like JV59_34065 510f80ce693587b07b5a4b5f52040138 680 SUPERFAMILY SSF63825 458 679 3.66E-21 T 14-10-2018 JV59_34065 510f80ce693587b07b5a4b5f52040138 680 SUPERFAMILY SSF101898 28 256 1.39E-21 T 14-10-2018 JV59_34065 510f80ce693587b07b5a4b5f52040138 680 Pfam PF01436 NHL repeat 505 528 1.8E-4 T 14-10-2018 IPR001258 NHL repeat GO:0005515 JV59_36840 4d5dd82bbc2d10490963705d5042cf66 254 Pfam PF07885 Ion channel 132 210 3.1E-13 T 14-10-2018 IPR013099 Potassium channel domain JV59_36840 4d5dd82bbc2d10490963705d5042cf66 254 Gene3D G3DSA:1.10.287.70 11 211 2.0E-40 T 14-10-2018 JV59_36840 4d5dd82bbc2d10490963705d5042cf66 254 SUPERFAMILY SSF81324 13 210 3.14E-46 T 14-10-2018 JV59_35660 a4e997e640821f7b7fcf93108f8a09d7 68 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 7.0E-23 T 14-10-2018 IPR009624 Uncharacterised protein family UPF0253 JV59_35660 a4e997e640821f7b7fcf93108f8a09d7 68 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 68 27.408 T 14-10-2018 IPR009624 Uncharacterised protein family UPF0253 JV59_35660 a4e997e640821f7b7fcf93108f8a09d7 68 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 3.3E-34 T 14-10-2018 IPR009624 Uncharacterised protein family UPF0253 JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 SUPERFAMILY SSF82693 565 674 4.08E-21 T 14-10-2018 JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 Gene3D G3DSA:3.30.70.1430 39 820 3.8E-302 T 14-10-2018 JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 Gene3D G3DSA:1.20.1640.10 513 1027 3.8E-302 T 14-10-2018 JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 Gene3D G3DSA:3.30.2090.10 180 277 3.8E-302 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 Gene3D G3DSA:1.20.1640.10 9 512 3.8E-302 T 14-10-2018 JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 7.2E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 7.2E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 7.2E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 7.2E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 7.2E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 7.2E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 7.2E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 7.2E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 7.2E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 SUPERFAMILY SSF82714 185 273 1.44E-22 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 SUPERFAMILY SSF82693 39 132 3.82E-25 T 14-10-2018 JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 Gene3D G3DSA:3.30.70.1440 672 869 3.8E-302 T 14-10-2018 JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 SUPERFAMILY SSF82693 136 332 1.44E-20 T 14-10-2018 JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 SUPERFAMILY SSF82714 725 809 8.11E-20 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 SUPERFAMILY SSF82866 298 500 2.35E-48 T 14-10-2018 JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 Gene3D G3DSA:3.30.70.1430 567 671 3.8E-302 T 14-10-2018 JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 Gene3D G3DSA:3.30.2090.10 724 812 3.8E-302 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 Gene3D G3DSA:3.30.70.1320 134 334 3.8E-302 T 14-10-2018 JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1032 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 SUPERFAMILY SSF82866 809 1032 5.75E-42 T 14-10-2018 JV59_18840 208e78980dbf42685e41affc4e1deae3 1050 Pfam PF00873 AcrB/AcrD/AcrF family 3 1030 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_22505 5f97b9c715eb4311445fe83fb0920337 301 Gene3D G3DSA:1.10.10.60 247 300 1.6E-17 T 14-10-2018 JV59_22505 5f97b9c715eb4311445fe83fb0920337 301 Gene3D G3DSA:1.10.10.60 189 246 4.8E-13 T 14-10-2018 JV59_22505 5f97b9c715eb4311445fe83fb0920337 301 SUPERFAMILY SSF46689 250 298 3.63E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_22505 5f97b9c715eb4311445fe83fb0920337 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 280 5.7E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_22505 5f97b9c715eb4311445fe83fb0920337 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 280 296 5.7E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_22505 5f97b9c715eb4311445fe83fb0920337 301 SUPERFAMILY SSF46689 197 247 2.42E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_22505 5f97b9c715eb4311445fe83fb0920337 301 Pfam PF12833 Helix-turn-helix domain 219 297 4.3E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_22505 5f97b9c715eb4311445fe83fb0920337 301 SMART SM00342 213 296 9.5E-30 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_39165 3cd1645bca054d08861206d0b148867a 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 JV59_39165 3cd1645bca054d08861206d0b148867a 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 6.4E-269 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 JV59_39165 3cd1645bca054d08861206d0b148867a 613 Pfam PF00920 Dehydratase family 34 604 4.8E-222 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 JV59_39165 3cd1645bca054d08861206d0b148867a 613 Gene3D G3DSA:3.50.30.80 421 573 3.6E-56 T 14-10-2018 JV59_39165 3cd1645bca054d08861206d0b148867a 613 SUPERFAMILY SSF143975 3 420 9.15E-138 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 JV59_39165 3cd1645bca054d08861206d0b148867a 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 JV59_39165 3cd1645bca054d08861206d0b148867a 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 45.498 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 JV59_39165 3cd1645bca054d08861206d0b148867a 613 SUPERFAMILY SSF52016 421 608 9.42E-62 T 14-10-2018 JV59_40635 8ea5ce99153fad792a853a9ca247f9cf 203 Gene3D G3DSA:1.10.3290.10 23 202 6.5E-33 T 14-10-2018 IPR036597 Fido-like domain superfamily JV59_40635 8ea5ce99153fad792a853a9ca247f9cf 203 TIGRFAM TIGR02613 mob_myst_B: mobile mystery protein B 11 196 3.1E-62 T 14-10-2018 IPR013436 Mobile mystery protein B JV59_40635 8ea5ce99153fad792a853a9ca247f9cf 203 SUPERFAMILY SSF140931 36 198 4.45E-28 T 14-10-2018 IPR036597 Fido-like domain superfamily JV59_40635 8ea5ce99153fad792a853a9ca247f9cf 203 Pfam PF02661 Fic/DOC family 62 149 3.1E-14 T 14-10-2018 IPR003812 Fido domain JV59_30835 17f9a438ed82ef0d0ba9fb72c845db09 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 219 2.6E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_30835 17f9a438ed82ef0d0ba9fb72c845db09 232 Gene3D G3DSA:1.10.3720.10 1 229 4.8E-29 T 14-10-2018 IPR035906 MetI-like superfamily JV59_30835 17f9a438ed82ef0d0ba9fb72c845db09 232 SUPERFAMILY SSF161098 17 221 4.97E-30 T 14-10-2018 IPR035906 MetI-like superfamily JV59_34725 752b7db047a8e01a1627c21e72002bbd 783 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 675 683 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 JV59_34725 752b7db047a8e01a1627c21e72002bbd 783 Gene3D G3DSA:1.10.8.60 490 583 2.7E-32 T 14-10-2018 JV59_34725 752b7db047a8e01a1627c21e72002bbd 783 Hamap MF_01973 Lon protease [lon]. 11 771 71.64 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 JV59_34725 752b7db047a8e01a1627c21e72002bbd 783 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 JV59_34725 752b7db047a8e01a1627c21e72002bbd 783 SUPERFAMILY SSF54211 594 769 9.1E-60 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JV59_34725 752b7db047a8e01a1627c21e72002bbd 783 SUPERFAMILY SSF52540 312 586 4.99E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_34725 752b7db047a8e01a1627c21e72002bbd 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 1.3E-56 T 14-10-2018 JV59_34725 752b7db047a8e01a1627c21e72002bbd 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 1.3E-56 T 14-10-2018 JV59_34725 752b7db047a8e01a1627c21e72002bbd 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 1.3E-56 T 14-10-2018 JV59_34725 752b7db047a8e01a1627c21e72002bbd 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 1.3E-56 T 14-10-2018 JV59_34725 752b7db047a8e01a1627c21e72002bbd 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 1.3E-56 T 14-10-2018 JV59_34725 752b7db047a8e01a1627c21e72002bbd 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 9.3E-99 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 JV59_34725 752b7db047a8e01a1627c21e72002bbd 783 SUPERFAMILY SSF88697 10 200 5.72E-50 T 14-10-2018 IPR015947 PUA-like superfamily JV59_34725 752b7db047a8e01a1627c21e72002bbd 783 Gene3D G3DSA:1.20.58.1480 119 244 1.1E-43 T 14-10-2018 JV59_34725 752b7db047a8e01a1627c21e72002bbd 783 SMART SM00464 10 201 5.2E-80 T 14-10-2018 IPR003111 Lon, substrate-binding domain JV59_34725 752b7db047a8e01a1627c21e72002bbd 783 PIRSF PIRSF001174 1 774 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 JV59_34725 752b7db047a8e01a1627c21e72002bbd 783 Gene3D G3DSA:3.30.230.10 584 771 4.8E-85 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JV59_34725 752b7db047a8e01a1627c21e72002bbd 783 Gene3D G3DSA:3.40.50.300 312 489 6.2E-61 T 14-10-2018 JV59_34725 752b7db047a8e01a1627c21e72002bbd 783 SMART SM00382 347 491 2.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_34725 752b7db047a8e01a1627c21e72002bbd 783 Gene3D G3DSA:2.30.130.40 1 117 4.2E-37 T 14-10-2018 JV59_34725 752b7db047a8e01a1627c21e72002bbd 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 488 4.1E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JV59_34725 752b7db047a8e01a1627c21e72002bbd 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 9.5E-43 T 14-10-2018 IPR003111 Lon, substrate-binding domain JV59_17800 ffcabcd6cf2d5f91e6e011d0fdd6cbcd 919 Gene3D G3DSA:3.30.830.10 267 465 4.4E-6 T 14-10-2018 JV59_17800 ffcabcd6cf2d5f91e6e011d0fdd6cbcd 919 SUPERFAMILY SSF63411 488 713 7.72E-21 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JV59_17800 ffcabcd6cf2d5f91e6e011d0fdd6cbcd 919 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 60 83 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 JV59_17800 ffcabcd6cf2d5f91e6e011d0fdd6cbcd 919 Gene3D G3DSA:3.30.830.10 507 715 8.9E-14 T 14-10-2018 JV59_17800 ffcabcd6cf2d5f91e6e011d0fdd6cbcd 919 SUPERFAMILY SSF63411 22 243 1.92E-41 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JV59_17800 ffcabcd6cf2d5f91e6e011d0fdd6cbcd 919 Gene3D G3DSA:3.30.830.10 30 246 3.7E-58 T 14-10-2018 JV59_17800 ffcabcd6cf2d5f91e6e011d0fdd6cbcd 919 Pfam PF00675 Insulinase (Peptidase family M16) 51 167 7.5E-24 T 14-10-2018 IPR011765 Peptidase M16, N-terminal JV59_17800 ffcabcd6cf2d5f91e6e011d0fdd6cbcd 919 Pfam PF05193 Peptidase M16 inactive domain 672 847 1.2E-10 T 14-10-2018 IPR007863 Peptidase M16, C-terminal JV59_17800 ffcabcd6cf2d5f91e6e011d0fdd6cbcd 919 Pfam PF05193 Peptidase M16 inactive domain 198 370 1.5E-13 T 14-10-2018 IPR007863 Peptidase M16, C-terminal JV59_17800 ffcabcd6cf2d5f91e6e011d0fdd6cbcd 919 SUPERFAMILY SSF63411 734 899 8.38E-13 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JV59_17800 ffcabcd6cf2d5f91e6e011d0fdd6cbcd 919 Gene3D G3DSA:3.30.830.10 742 909 1.1E-12 T 14-10-2018 JV59_20960 f725197ab60956df6f40635502addff4 289 SUPERFAMILY SSF55136 138 286 1.57E-27 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily JV59_20960 f725197ab60956df6f40635502addff4 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 103 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JV59_20960 f725197ab60956df6f40635502addff4 289 SMART SM00342 23 107 3.8E-30 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_20960 f725197ab60956df6f40635502addff4 289 Gene3D G3DSA:1.10.10.60 1 56 4.2E-14 T 14-10-2018 JV59_20960 f725197ab60956df6f40635502addff4 289 Gene3D G3DSA:3.20.80.10 138 287 2.2E-29 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily JV59_20960 f725197ab60956df6f40635502addff4 289 Pfam PF06445 GyrI-like small molecule binding domain 138 286 1.9E-27 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain JV59_20960 f725197ab60956df6f40635502addff4 289 SMART SM00871 137 287 1.4E-20 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding JV59_20960 f725197ab60956df6f40635502addff4 289 SUPERFAMILY SSF46689 60 111 2.24E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_20960 f725197ab60956df6f40635502addff4 289 SUPERFAMILY SSF46689 7 57 2.37E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_20960 f725197ab60956df6f40635502addff4 289 Pfam PF12833 Helix-turn-helix domain 29 108 1.3E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_20960 f725197ab60956df6f40635502addff4 289 Gene3D G3DSA:1.10.10.60 57 113 6.1E-17 T 14-10-2018 JV59_20960 f725197ab60956df6f40635502addff4 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 91 107 1.7E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_20960 f725197ab60956df6f40635502addff4 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 76 91 1.7E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_05005 d90398d1c65983279cbdfc2021394562 380 SUPERFAMILY SSF55073 211 367 8.63E-46 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_05005 d90398d1c65983279cbdfc2021394562 380 Pfam PF01814 Hemerythrin HHE cation binding domain 13 126 5.4E-10 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 JV59_05005 d90398d1c65983279cbdfc2021394562 380 Pfam PF00990 Diguanylate cyclase, GGDEF domain 207 362 1.2E-44 T 14-10-2018 IPR000160 GGDEF domain JV59_05005 d90398d1c65983279cbdfc2021394562 380 SUPERFAMILY SSF47188 1 131 6.67E-27 T 14-10-2018 IPR035938 Hemerythrin-like superfamily JV59_05005 d90398d1c65983279cbdfc2021394562 380 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 131 2.5E-31 T 14-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 JV59_05005 d90398d1c65983279cbdfc2021394562 380 Gene3D G3DSA:1.20.120.50 1 137 2.4E-27 T 14-10-2018 IPR035938 Hemerythrin-like superfamily JV59_05005 d90398d1c65983279cbdfc2021394562 380 Gene3D G3DSA:3.30.70.270 191 369 1.5E-54 T 14-10-2018 JV59_05005 d90398d1c65983279cbdfc2021394562 380 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 365 2.0E-46 T 14-10-2018 IPR000160 GGDEF domain JV59_05005 d90398d1c65983279cbdfc2021394562 380 SMART SM00267 195 367 7.3E-54 T 14-10-2018 IPR000160 GGDEF domain JV59_20725 fc0912bde4a595530f5274a92b072f5b 122 SUPERFAMILY SSF54593 12 120 1.65E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_20725 fc0912bde4a595530f5274a92b072f5b 122 Gene3D G3DSA:3.10.180.10 7 122 1.8E-17 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_01765 9052a6d073095a6cda56b6068e1fb16d 410 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 410 50.49 T 14-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 JV59_01765 9052a6d073095a6cda56b6068e1fb16d 410 SUPERFAMILY SSF52540 76 357 4.0E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_01765 9052a6d073095a6cda56b6068e1fb16d 410 Gene3D G3DSA:3.40.50.300 1 211 6.2E-71 T 14-10-2018 JV59_01765 9052a6d073095a6cda56b6068e1fb16d 410 Pfam PF00271 Helicase conserved C-terminal domain 235 341 8.6E-32 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_01765 9052a6d073095a6cda56b6068e1fb16d 410 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JV59_01765 9052a6d073095a6cda56b6068e1fb16d 410 Pfam PF00270 DEAD/DEAH box helicase 27 195 9.1E-46 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JV59_01765 9052a6d073095a6cda56b6068e1fb16d 410 SMART SM00490 260 341 1.6E-32 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_01765 9052a6d073095a6cda56b6068e1fb16d 410 Gene3D G3DSA:3.40.50.300 216 410 9.9E-51 T 14-10-2018 JV59_01765 9052a6d073095a6cda56b6068e1fb16d 410 SMART SM00487 22 222 1.1E-56 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JV59_19020 8c5ff7b931c5e8f02f3548ad00abf274 368 Gene3D G3DSA:2.40.50.100 292 360 4.6E-13 T 14-10-2018 JV59_19020 8c5ff7b931c5e8f02f3548ad00abf274 368 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_19020 8c5ff7b931c5e8f02f3548ad00abf274 368 Pfam PF00005 ABC transporter 18 158 3.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_19020 8c5ff7b931c5e8f02f3548ad00abf274 368 Gene3D G3DSA:3.40.50.300 5 238 3.8E-59 T 14-10-2018 JV59_19020 8c5ff7b931c5e8f02f3548ad00abf274 368 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 4 359 9.2E-141 T 14-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 JV59_19020 8c5ff7b931c5e8f02f3548ad00abf274 368 SUPERFAMILY SSF52540 12 238 3.55E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_19020 8c5ff7b931c5e8f02f3548ad00abf274 368 SUPERFAMILY SSF50331 236 359 5.37E-18 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal JV59_19020 8c5ff7b931c5e8f02f3548ad00abf274 368 SMART SM00382 25 208 1.7E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_19020 8c5ff7b931c5e8f02f3548ad00abf274 368 Pfam PF03459 TOBE domain 293 359 2.8E-13 T 14-10-2018 IPR005116 Transport-associated OB, type 1 JV59_26500 f1c9aa95e786f1a89be34bf05991aef3 85 Gene3D G3DSA:2.40.50.100 21 85 2.1E-31 T 14-10-2018 JV59_26500 f1c9aa95e786f1a89be34bf05991aef3 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26500 f1c9aa95e786f1a89be34bf05991aef3 85 Pfam PF01016 Ribosomal L27 protein 2 82 1.2E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26500 f1c9aa95e786f1a89be34bf05991aef3 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.431 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26500 f1c9aa95e786f1a89be34bf05991aef3 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 6.0E-18 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26500 f1c9aa95e786f1a89be34bf05991aef3 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 3.3E-43 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26500 f1c9aa95e786f1a89be34bf05991aef3 85 SUPERFAMILY SSF110324 2 80 9.77E-35 T 14-10-2018 JV59_26500 f1c9aa95e786f1a89be34bf05991aef3 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.6E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26500 f1c9aa95e786f1a89be34bf05991aef3 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.6E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26500 f1c9aa95e786f1a89be34bf05991aef3 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.6E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_39370 77a3856a826ebc820d265166b8e94943 305 SUPERFAMILY SSF53850 91 290 1.19E-26 T 14-10-2018 JV59_39370 77a3856a826ebc820d265166b8e94943 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 2.2E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_39370 77a3856a826ebc820d265166b8e94943 305 Gene3D G3DSA:3.40.190.290 95 274 1.1E-13 T 14-10-2018 JV59_39370 77a3856a826ebc820d265166b8e94943 305 Gene3D G3DSA:1.10.10.10 4 91 4.4E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_39370 77a3856a826ebc820d265166b8e94943 305 SUPERFAMILY SSF46785 7 88 1.21E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_39370 77a3856a826ebc820d265166b8e94943 305 Pfam PF03466 LysR substrate binding domain 91 290 1.1E-23 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_38560 9268063228cd8cf481b79d1ba4a24bc7 337 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 1 326 1.9E-166 T 14-10-2018 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00520+4.2.1.115|MetaCyc: PWY-6143|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 JV59_38560 9268063228cd8cf481b79d1ba4a24bc7 337 SUPERFAMILY SSF51735 1 261 2.14E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_38560 9268063228cd8cf481b79d1ba4a24bc7 337 Pfam PF02719 Polysaccharide biosynthesis protein 7 281 1.1E-101 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain JV59_38560 9268063228cd8cf481b79d1ba4a24bc7 337 Gene3D G3DSA:3.40.50.720 4 310 9.8E-128 T 14-10-2018 JV59_38560 9268063228cd8cf481b79d1ba4a24bc7 337 Gene3D G3DSA:3.90.25.30 171 314 9.8E-128 T 14-10-2018 JV59_24940 5f3ce1b343ecf1b68c14d1bfb60cf077 166 SUPERFAMILY SSF109854 6 155 5.04E-28 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes JV59_24940 5f3ce1b343ecf1b68c14d1bfb60cf077 166 Pfam PF09351 Domain of unknown function (DUF1993) 6 148 4.5E-20 T 14-10-2018 IPR018531 Protein of unknown function DUF1993 JV59_24940 5f3ce1b343ecf1b68c14d1bfb60cf077 166 Gene3D G3DSA:1.20.120.450 2 162 4.2E-36 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes JV59_34130 0da14baf4a8e0078bb81ca436916ea61 1014 Pfam PF13283 Bacteriophage N adsorption protein A C-term 834 997 3.0E-17 T 14-10-2018 IPR025137 Bacteriophage N4 adsorption protein A, C-terminal JV59_00650 a35883bd34a4c24d5f266da5c2c2888b 671 Gene3D G3DSA:3.30.70.270 211 386 1.7E-20 T 14-10-2018 JV59_00650 a35883bd34a4c24d5f266da5c2c2888b 671 SMART SM00052 397 643 7.6E-17 T 14-10-2018 IPR001633 EAL domain JV59_00650 a35883bd34a4c24d5f266da5c2c2888b 671 Pfam PF00563 EAL domain 412 636 2.7E-46 T 14-10-2018 IPR001633 EAL domain JV59_00650 a35883bd34a4c24d5f266da5c2c2888b 671 Pfam PF00990 Diguanylate cyclase, GGDEF domain 229 381 2.2E-20 T 14-10-2018 IPR000160 GGDEF domain JV59_00650 a35883bd34a4c24d5f266da5c2c2888b 671 SUPERFAMILY SSF141868 408 636 5.75E-41 T 14-10-2018 IPR035919 EAL domain superfamily JV59_00650 a35883bd34a4c24d5f266da5c2c2888b 671 SUPERFAMILY SSF55073 233 386 4.47E-15 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_00650 a35883bd34a4c24d5f266da5c2c2888b 671 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 39 134 3.7E-26 T 14-10-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 JV59_00650 a35883bd34a4c24d5f266da5c2c2888b 671 SMART SM00267 216 386 2.1E-7 T 14-10-2018 IPR000160 GGDEF domain JV59_00650 a35883bd34a4c24d5f266da5c2c2888b 671 Gene3D G3DSA:3.20.20.450 405 643 9.3E-41 T 14-10-2018 IPR035919 EAL domain superfamily JV59_30820 22aebdc03b1c8ff02f7083bbf2b3dad1 591 SUPERFAMILY SSF53218 362 507 3.8E-43 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily JV59_30820 22aebdc03b1c8ff02f7083bbf2b3dad1 591 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 362 498 2.3E-31 T 14-10-2018 IPR001453 MoaB/Mog domain JV59_30820 22aebdc03b1c8ff02f7083bbf2b3dad1 591 Gene3D G3DSA:3.40.50.300 10 165 9.6E-55 T 14-10-2018 JV59_30820 22aebdc03b1c8ff02f7083bbf2b3dad1 591 Pfam PF00994 Probable molybdopterin binding domain 365 502 2.2E-26 T 14-10-2018 IPR001453 MoaB/Mog domain JV59_30820 22aebdc03b1c8ff02f7083bbf2b3dad1 591 PIRSF PIRSF036618 1 591 0.0 T 14-10-2018 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA JV59_30820 22aebdc03b1c8ff02f7083bbf2b3dad1 591 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 9 165 2.7E-43 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 JV59_30820 22aebdc03b1c8ff02f7083bbf2b3dad1 591 Gene3D G3DSA:2.40.340.10 512 582 2.4E-137 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JV59_30820 22aebdc03b1c8ff02f7083bbf2b3dad1 591 Gene3D G3DSA:3.90.105.10 211 359 2.4E-137 T 14-10-2018 JV59_30820 22aebdc03b1c8ff02f7083bbf2b3dad1 591 SUPERFAMILY SSF52540 7 169 2.78E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_30820 22aebdc03b1c8ff02f7083bbf2b3dad1 591 SMART SM00852 365 502 2.1E-40 T 14-10-2018 IPR001453 MoaB/Mog domain JV59_30820 22aebdc03b1c8ff02f7083bbf2b3dad1 591 Gene3D G3DSA:3.40.980.10 360 511 2.4E-137 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily JV59_30820 22aebdc03b1c8ff02f7083bbf2b3dad1 591 Gene3D G3DSA:2.170.190.11 235 326 2.4E-137 T 14-10-2018 JV59_30820 22aebdc03b1c8ff02f7083bbf2b3dad1 591 Pfam PF03453 MoeA N-terminal region (domain I and II) 193 352 2.8E-39 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JV59_30820 22aebdc03b1c8ff02f7083bbf2b3dad1 591 SUPERFAMILY SSF63867 511 589 2.09E-22 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JV59_30820 22aebdc03b1c8ff02f7083bbf2b3dad1 591 Pfam PF03454 MoeA C-terminal region (domain IV) 515 587 1.2E-20 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JV59_30820 22aebdc03b1c8ff02f7083bbf2b3dad1 591 SUPERFAMILY SSF63882 190 361 1.83E-48 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JV59_30820 22aebdc03b1c8ff02f7083bbf2b3dad1 591 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 9 142 2.6E-47 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 JV59_30820 22aebdc03b1c8ff02f7083bbf2b3dad1 591 Gene3D G3DSA:2.20.25.120 53 85 9.6E-55 T 14-10-2018 JV59_17480 7eb67d31add93e6a12cd979daa243444 150 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 99 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 JV59_17480 7eb67d31add93e6a12cd979daa243444 150 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 108 3.8E-25 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain JV59_17480 7eb67d31add93e6a12cd979daa243444 150 PIRSF PIRSF006019 1 147 4.3E-43 T 14-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 JV59_17480 7eb67d31add93e6a12cd979daa243444 150 Gene3D G3DSA:3.40.140.10 2 148 5.1E-39 T 14-10-2018 JV59_17480 7eb67d31add93e6a12cd979daa243444 150 SUPERFAMILY SSF53927 7 128 6.02E-30 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 JV59_37785 7fc5641f69291cbf481ff2b64259efcd 126 SUPERFAMILY SSF64263 1 119 5.36E-51 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37785 7fc5641f69291cbf481ff2b64259efcd 126 Pfam PF01196 Ribosomal protein L17 20 116 1.0E-34 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37785 7fc5641f69291cbf481ff2b64259efcd 126 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 5.5E-49 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37785 7fc5641f69291cbf481ff2b64259efcd 126 Gene3D G3DSA:3.90.1030.10 1 117 4.0E-48 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37785 7fc5641f69291cbf481ff2b64259efcd 126 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37785 7fc5641f69291cbf481ff2b64259efcd 126 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.798 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_28575 0a9e6c9d1d5b38912aacce8f2deefd62 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.957 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JV59_28575 0a9e6c9d1d5b38912aacce8f2deefd62 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 8.4E-63 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JV59_28575 0a9e6c9d1d5b38912aacce8f2deefd62 173 Gene3D G3DSA:3.30.420.10 2 159 4.5E-53 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JV59_28575 0a9e6c9d1d5b38912aacce8f2deefd62 173 SUPERFAMILY SSF53098 3 156 7.59E-56 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JV59_28575 0a9e6c9d1d5b38912aacce8f2deefd62 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 2.9E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JV59_28575 0a9e6c9d1d5b38912aacce8f2deefd62 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 2.9E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JV59_28575 0a9e6c9d1d5b38912aacce8f2deefd62 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 2.9E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JV59_28575 0a9e6c9d1d5b38912aacce8f2deefd62 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 2.9E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JV59_28575 0a9e6c9d1d5b38912aacce8f2deefd62 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 2.9E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JV59_28575 0a9e6c9d1d5b38912aacce8f2deefd62 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 2.2E-75 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JV59_28575 0a9e6c9d1d5b38912aacce8f2deefd62 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 14-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 JV59_01850 aa006fdfba57b7f5ed818a1c60d3140b 311 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 307 18.788 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_01850 aa006fdfba57b7f5ed818a1c60d3140b 311 Gene3D G3DSA:2.30.130.10 249 310 3.7E-20 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 JV59_01850 aa006fdfba57b7f5ed818a1c60d3140b 311 SUPERFAMILY SSF55120 9 247 1.7E-83 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_01850 aa006fdfba57b7f5ed818a1c60d3140b 311 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 1.5E-24 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 JV59_01850 aa006fdfba57b7f5ed818a1c60d3140b 311 SUPERFAMILY SSF88697 250 309 9.94E-12 T 14-10-2018 IPR015947 PUA-like superfamily JV59_01850 aa006fdfba57b7f5ed818a1c60d3140b 311 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 5.5E-87 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_01850 aa006fdfba57b7f5ed818a1c60d3140b 311 Gene3D G3DSA:3.30.2350.10 1 248 6.7E-95 T 14-10-2018 JV59_01850 aa006fdfba57b7f5ed818a1c60d3140b 311 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 307 5.3E-17 T 14-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_01850 aa006fdfba57b7f5ed818a1c60d3140b 311 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 2.2E-56 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 JV59_01365 eb6aae9d3be087b1734b248f6cd1b05c 327 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 112 125 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_01365 eb6aae9d3be087b1734b248f6cd1b05c 327 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 281 307 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_01365 eb6aae9d3be087b1734b248f6cd1b05c 327 Pfam PF00140 Sigma-70 factor, region 1.2 50 83 4.0E-12 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JV59_01365 eb6aae9d3be087b1734b248f6cd1b05c 327 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 84 311 4.5E-36 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JV59_01365 eb6aae9d3be087b1734b248f6cd1b05c 327 Pfam PF04539 Sigma-70 region 3 168 241 5.2E-21 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 JV59_01365 eb6aae9d3be087b1734b248f6cd1b05c 327 SUPERFAMILY SSF88659 161 234 2.92E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JV59_01365 eb6aae9d3be087b1734b248f6cd1b05c 327 Pfam PF04545 Sigma-70, region 4 256 309 1.3E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 JV59_01365 eb6aae9d3be087b1734b248f6cd1b05c 327 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 42 322 1.2E-139 T 14-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JV59_01365 eb6aae9d3be087b1734b248f6cd1b05c 327 Gene3D G3DSA:1.10.10.10 161 236 2.2E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_01365 eb6aae9d3be087b1734b248f6cd1b05c 327 Gene3D G3DSA:1.10.10.10 244 324 2.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_01365 eb6aae9d3be087b1734b248f6cd1b05c 327 SUPERFAMILY SSF88946 49 158 9.55E-46 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JV59_01365 eb6aae9d3be087b1734b248f6cd1b05c 327 Pfam PF04542 Sigma-70 region 2 88 157 6.8E-20 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JV59_01365 eb6aae9d3be087b1734b248f6cd1b05c 327 Gene3D G3DSA:1.10.601.10 2 157 1.7E-47 T 14-10-2018 JV59_01365 eb6aae9d3be087b1734b248f6cd1b05c 327 SUPERFAMILY SSF88659 218 317 5.82E-24 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JV59_01365 eb6aae9d3be087b1734b248f6cd1b05c 327 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 4 322 39.664 T 14-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JV59_01365 eb6aae9d3be087b1734b248f6cd1b05c 327 PRINTS PR00046 Major sigma-70 factor signature 112 125 1.4E-27 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_01365 eb6aae9d3be087b1734b248f6cd1b05c 327 PRINTS PR00046 Major sigma-70 factor signature 260 272 1.4E-27 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_01365 eb6aae9d3be087b1734b248f6cd1b05c 327 PRINTS PR00046 Major sigma-70 factor signature 296 307 1.4E-27 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_01365 eb6aae9d3be087b1734b248f6cd1b05c 327 PRINTS PR00046 Major sigma-70 factor signature 136 144 1.4E-27 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_01365 eb6aae9d3be087b1734b248f6cd1b05c 327 PRINTS PR00046 Major sigma-70 factor signature 281 296 1.4E-27 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_19815 5d81446b6c25b68e5cd36590c330ac41 232 Pfam PF00072 Response regulator receiver domain 9 117 2.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_19815 5d81446b6c25b68e5cd36590c330ac41 232 SMART SM00862 155 231 2.9E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_19815 5d81446b6c25b68e5cd36590c330ac41 232 Gene3D G3DSA:3.40.50.2300 3 131 2.9E-35 T 14-10-2018 JV59_19815 5d81446b6c25b68e5cd36590c330ac41 232 SMART SM00448 7 117 2.4E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_19815 5d81446b6c25b68e5cd36590c330ac41 232 SUPERFAMILY SSF46894 138 231 3.4E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_19815 5d81446b6c25b68e5cd36590c330ac41 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 231 6.6E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_19815 5d81446b6c25b68e5cd36590c330ac41 232 Gene3D G3DSA:1.10.10.10 132 232 1.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_19815 5d81446b6c25b68e5cd36590c330ac41 232 SUPERFAMILY SSF52172 5 130 5.55E-38 T 14-10-2018 IPR011006 CheY-like superfamily JV59_32735 8fc452ff268547a182c03fdf52987021 150 Pfam PF04224 Protein of unknown function, DUF417 5 145 1.1E-43 T 14-10-2018 IPR007339 Inner membrane protein RclC-like JV59_32735 8fc452ff268547a182c03fdf52987021 150 PIRSF PIRSF028065 1 149 5.5E-71 T 14-10-2018 IPR016865 Inner membrane protein RclC JV59_22010 a3e8ff883d9757f3b59dc32730aa1bca 184 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_22010 a3e8ff883d9757f3b59dc32730aa1bca 184 Gene3D G3DSA:3.30.700.10 6 155 1.7E-13 T 14-10-2018 JV59_22010 a3e8ff883d9757f3b59dc32730aa1bca 184 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 2.4E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_22010 a3e8ff883d9757f3b59dc32730aa1bca 184 SUPERFAMILY SSF54523 6 83 7.3E-13 T 14-10-2018 JV59_22010 a3e8ff883d9757f3b59dc32730aa1bca 184 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 3.6E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_23440 03e744c180daa8c45b2ad5285b3a4ca9 247 Gene3D G3DSA:1.20.144.10 12 244 6.9E-45 T 14-10-2018 JV59_23440 03e744c180daa8c45b2ad5285b3a4ca9 247 SMART SM00014 81 229 2.7E-11 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JV59_23440 03e744c180daa8c45b2ad5285b3a4ca9 247 SUPERFAMILY SSF48317 36 228 8.63E-23 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily JV59_23440 03e744c180daa8c45b2ad5285b3a4ca9 247 Pfam PF01569 PAP2 superfamily 85 228 6.4E-21 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JV59_36115 fa214b897ee57cf9cbbfaf39911694d2 280 Gene3D G3DSA:3.30.1380.10 22 280 2.8E-103 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JV59_36115 fa214b897ee57cf9cbbfaf39911694d2 280 PIRSF PIRSF018455 9 280 1.2E-111 T 14-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 JV59_36115 fa214b897ee57cf9cbbfaf39911694d2 280 Pfam PF03411 Penicillin-insensitive murein endopeptidase 38 277 2.1E-96 T 14-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 JV59_36115 fa214b897ee57cf9cbbfaf39911694d2 280 SUPERFAMILY SSF55166 24 279 2.39E-93 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JV59_34490 dae02ea0c2d3fe185e3522afe4186eaa 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site JV59_34490 dae02ea0c2d3fe185e3522afe4186eaa 77 SUPERFAMILY SSF47336 2 76 1.2E-23 T 14-10-2018 IPR036736 ACP-like superfamily JV59_34490 dae02ea0c2d3fe185e3522afe4186eaa 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.2E-16 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain JV59_34490 dae02ea0c2d3fe185e3522afe4186eaa 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 6.6E-37 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 JV59_34490 dae02ea0c2d3fe185e3522afe4186eaa 77 Gene3D G3DSA:1.10.1200.10 1 76 1.9E-30 T 14-10-2018 IPR036736 ACP-like superfamily JV59_34490 dae02ea0c2d3fe185e3522afe4186eaa 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.938 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 JV59_19635 0a01c9a45e53de8ee878b255a136f5b2 335 Gene3D G3DSA:3.40.50.2300 159 289 7.9E-70 T 14-10-2018 JV59_19635 0a01c9a45e53de8ee878b255a136f5b2 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 9.3E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_19635 0a01c9a45e53de8ee878b255a136f5b2 335 Gene3D G3DSA:3.40.50.2300 62 302 7.9E-70 T 14-10-2018 JV59_19635 0a01c9a45e53de8ee878b255a136f5b2 335 SMART SM00354 1 71 9.3E-29 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_19635 0a01c9a45e53de8ee878b255a136f5b2 335 Gene3D G3DSA:1.10.260.40 1 59 1.0E-18 T 14-10-2018 JV59_19635 0a01c9a45e53de8ee878b255a136f5b2 335 Pfam PF13377 Periplasmic binding protein-like domain 169 329 5.4E-38 T 14-10-2018 JV59_19635 0a01c9a45e53de8ee878b255a136f5b2 335 SUPERFAMILY SSF53822 61 331 3.64E-77 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_19635 0a01c9a45e53de8ee878b255a136f5b2 335 SUPERFAMILY SSF47413 1 59 3.28E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_24100 6ffe535beb3f6083dd8e0d262a3cd6b1 158 SUPERFAMILY SSF46785 3 62 1.92E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_24100 6ffe535beb3f6083dd8e0d262a3cd6b1 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.0E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_24100 6ffe535beb3f6083dd8e0d262a3cd6b1 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.0E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_24100 6ffe535beb3f6083dd8e0d262a3cd6b1 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.0E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_24100 6ffe535beb3f6083dd8e0d262a3cd6b1 158 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 5.2E-17 T 14-10-2018 JV59_24100 6ffe535beb3f6083dd8e0d262a3cd6b1 158 SMART SM00344 3 112 9.5E-45 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 JV59_24100 6ffe535beb3f6083dd8e0d262a3cd6b1 158 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site JV59_24100 6ffe535beb3f6083dd8e0d262a3cd6b1 158 SUPERFAMILY SSF54909 63 148 2.15E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_24100 6ffe535beb3f6083dd8e0d262a3cd6b1 158 Gene3D G3DSA:3.30.70.920 55 150 1.4E-27 T 14-10-2018 JV59_24100 6ffe535beb3f6083dd8e0d262a3cd6b1 158 Gene3D G3DSA:1.10.10.10 1 54 8.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_24100 6ffe535beb3f6083dd8e0d262a3cd6b1 158 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 2.9E-23 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JV59_39300 dd0d857694d77276863f0315da07b415 293 SUPERFAMILY SSF110849 42 174 1.36E-34 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily JV59_39300 dd0d857694d77276863f0315da07b415 293 Pfam PF02195 ParB-like nuclease domain 43 130 1.1E-28 T 14-10-2018 IPR003115 ParB/Sulfiredoxin JV59_39300 dd0d857694d77276863f0315da07b415 293 Gene3D G3DSA:3.90.1530.30 53 116 7.2E-28 T 14-10-2018 JV59_39300 dd0d857694d77276863f0315da07b415 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 38 212 2.8E-56 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 JV59_39300 dd0d857694d77276863f0315da07b415 293 SMART SM00470 40 130 1.1E-35 T 14-10-2018 IPR003115 ParB/Sulfiredoxin JV59_39300 dd0d857694d77276863f0315da07b415 293 Gene3D G3DSA:1.10.10.2830 117 230 2.8E-32 T 14-10-2018 JV59_34870 79acc65d3c89c7b65a9ef1f4170e1853 435 Pfam PF02803 Thiolase, C-terminal domain 295 433 1.1E-33 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 JV59_34870 79acc65d3c89c7b65a9ef1f4170e1853 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 JV59_34870 79acc65d3c89c7b65a9ef1f4170e1853 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 5.5E-125 T 14-10-2018 IPR002155 Thiolase GO:0016747 JV59_34870 79acc65d3c89c7b65a9ef1f4170e1853 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 6 435 4.5E-264 T 14-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 JV59_34870 79acc65d3c89c7b65a9ef1f4170e1853 435 PIRSF PIRSF000429 8 435 3.5E-116 T 14-10-2018 IPR002155 Thiolase GO:0016747 JV59_34870 79acc65d3c89c7b65a9ef1f4170e1853 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 1.3E-60 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 JV59_34870 79acc65d3c89c7b65a9ef1f4170e1853 435 SUPERFAMILY SSF53901 296 434 4.49E-30 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_34870 79acc65d3c89c7b65a9ef1f4170e1853 435 SUPERFAMILY SSF53901 12 291 4.12E-59 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_34870 79acc65d3c89c7b65a9ef1f4170e1853 435 Gene3D G3DSA:3.40.47.10 4 434 2.3E-108 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_34870 79acc65d3c89c7b65a9ef1f4170e1853 435 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 1 435 65.617 T 14-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 JV59_20510 8f596acd31a3ff7f6162e33797ae436d 325 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 9.1E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_20510 8f596acd31a3ff7f6162e33797ae436d 325 SUPERFAMILY SSF47413 11 68 2.34E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_20510 8f596acd31a3ff7f6162e33797ae436d 325 Pfam PF13377 Periplasmic binding protein-like domain 168 324 1.2E-23 T 14-10-2018 JV59_20510 8f596acd31a3ff7f6162e33797ae436d 325 SMART SM00354 12 83 1.8E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_20510 8f596acd31a3ff7f6162e33797ae436d 325 SUPERFAMILY SSF53822 117 313 1.22E-32 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_20510 8f596acd31a3ff7f6162e33797ae436d 325 Gene3D G3DSA:3.40.50.2300 117 303 1.5E-35 T 14-10-2018 JV59_20510 8f596acd31a3ff7f6162e33797ae436d 325 Gene3D G3DSA:3.40.50.2300 160 287 1.5E-35 T 14-10-2018 JV59_20510 8f596acd31a3ff7f6162e33797ae436d 325 Gene3D G3DSA:1.10.260.40 10 66 7.2E-21 T 14-10-2018 JV59_34515 c96026311bfdd927659e259dff5e276c 56 Pfam PF01783 Ribosomal L32p protein family 2 56 2.6E-20 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_34515 c96026311bfdd927659e259dff5e276c 56 SUPERFAMILY SSF57829 2 55 7.32E-18 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 JV59_34515 c96026311bfdd927659e259dff5e276c 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.146 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_34515 c96026311bfdd927659e259dff5e276c 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 8.6E-20 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_38925 4da5eb9766f408e44b208638126fa948 543 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 10 542 9.7E-274 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 JV59_38925 4da5eb9766f408e44b208638126fa948 543 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 267 282 - T 14-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 JV59_38925 4da5eb9766f408e44b208638126fa948 543 SUPERFAMILY SSF53795 230 542 4.81E-125 T 14-10-2018 JV59_38925 4da5eb9766f408e44b208638126fa948 543 Gene3D G3DSA:3.40.449.10 25 235 1.8E-234 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 JV59_38925 4da5eb9766f408e44b208638126fa948 543 Gene3D G3DSA:3.90.228.20 236 527 1.8E-234 T 14-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 JV59_38925 4da5eb9766f408e44b208638126fa948 543 PIRSF PIRSF006294 4 542 5.9E-228 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 JV59_38925 4da5eb9766f408e44b208638126fa948 543 Gene3D G3DSA:2.170.8.10 49 352 1.8E-234 T 14-10-2018 JV59_38925 4da5eb9766f408e44b208638126fa948 543 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 18 540 54.782 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 JV59_38925 4da5eb9766f408e44b208638126fa948 543 SUPERFAMILY SSF68923 11 228 2.62E-88 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 JV59_38925 4da5eb9766f408e44b208638126fa948 543 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 492 1.2E-210 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 JV59_27560 cbd49df4bc0195155019ea6b23e8a56c 623 SMART SM00283 361 622 1.1E-75 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_27560 cbd49df4bc0195155019ea6b23e8a56c 623 Pfam PF02743 Cache domain 39 254 6.3E-32 T 14-10-2018 IPR033479 Double Cache domain 1 JV59_27560 cbd49df4bc0195155019ea6b23e8a56c 623 SUPERFAMILY SSF58104 314 621 3.79E-74 T 14-10-2018 JV59_27560 cbd49df4bc0195155019ea6b23e8a56c 623 SUPERFAMILY SSF103190 50 184 2.88E-19 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JV59_27560 cbd49df4bc0195155019ea6b23e8a56c 623 Gene3D G3DSA:1.10.287.950 292 623 1.9E-69 T 14-10-2018 JV59_27560 cbd49df4bc0195155019ea6b23e8a56c 623 Gene3D G3DSA:3.30.450.20 49 266 5.1E-73 T 14-10-2018 JV59_27560 cbd49df4bc0195155019ea6b23e8a56c 623 SMART SM00304 374 441 67.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_27560 cbd49df4bc0195155019ea6b23e8a56c 623 SMART SM00304 292 346 3.2E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_27560 cbd49df4bc0195155019ea6b23e8a56c 623 Pfam PF00672 HAMP domain 294 342 1.1E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_27560 cbd49df4bc0195155019ea6b23e8a56c 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 429 589 6.5E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_27560 cbd49df4bc0195155019ea6b23e8a56c 623 Gene3D G3DSA:3.30.450.20 62 173 5.1E-73 T 14-10-2018 JV59_24080 1ced6cca8366d9bab185e3346b5ed1d8 1039 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 839 850 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 JV59_24080 1ced6cca8366d9bab185e3346b5ed1d8 1039 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 73 187 5.0E-46 T 14-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 JV59_24080 1ced6cca8366d9bab185e3346b5ed1d8 1039 Pfam PF00171 Aldehyde dehydrogenase family 583 1036 1.1E-116 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JV59_24080 1ced6cca8366d9bab185e3346b5ed1d8 1039 Gene3D G3DSA:3.40.605.10 549 1036 1.4E-147 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JV59_24080 1ced6cca8366d9bab185e3346b5ed1d8 1039 SUPERFAMILY SSF53720 559 1036 7.33E-125 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JV59_24080 1ced6cca8366d9bab185e3346b5ed1d8 1039 Gene3D G3DSA:3.40.309.10 814 1006 1.4E-147 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JV59_24080 1ced6cca8366d9bab185e3346b5ed1d8 1039 SUPERFAMILY SSF51730 190 532 5.1E-113 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like JV59_24080 1ced6cca8366d9bab185e3346b5ed1d8 1039 Gene3D G3DSA:3.20.20.220 148 525 7.4E-129 T 14-10-2018 JV59_24080 1ced6cca8366d9bab185e3346b5ed1d8 1039 Pfam PF01619 Proline dehydrogenase 197 490 5.2E-92 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 JV59_24080 1ced6cca8366d9bab185e3346b5ed1d8 1039 SUPERFAMILY SSF81935 17 189 1.57E-63 T 14-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 JV59_24080 1ced6cca8366d9bab185e3346b5ed1d8 1039 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 526 1036 1.4E-245 T 14-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 JV59_24080 1ced6cca8366d9bab185e3346b5ed1d8 1039 PIRSF PIRSF000197 3 1038 0.0 T 14-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 JV59_25945 59ebbf520136bf2c69402028c4d7436a 160 Pfam PF12688 Tetratrico peptide repeat 37 156 4.4E-14 T 14-10-2018 JV59_25945 59ebbf520136bf2c69402028c4d7436a 160 SUPERFAMILY SSF48452 4 152 2.28E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_25945 59ebbf520136bf2c69402028c4d7436a 160 SMART SM00028 35 70 120.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_25945 59ebbf520136bf2c69402028c4d7436a 160 SMART SM00028 72 105 0.0011 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_25945 59ebbf520136bf2c69402028c4d7436a 160 Gene3D G3DSA:1.25.40.10 1 64 1.5E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_25945 59ebbf520136bf2c69402028c4d7436a 160 Gene3D G3DSA:1.25.40.10 65 154 1.6E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_37995 3a85fef1936188a2aed8416256203d95 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 JV59_37995 3a85fef1936188a2aed8416256203d95 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 JV59_37995 3a85fef1936188a2aed8416256203d95 210 Gene3D G3DSA:2.60.120.10 10 138 6.1E-43 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_37995 3a85fef1936188a2aed8416256203d95 210 SUPERFAMILY SSF51206 8 136 1.83E-34 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JV59_37995 3a85fef1936188a2aed8416256203d95 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 7.0E-23 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JV59_37995 3a85fef1936188a2aed8416256203d95 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.8E-16 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 JV59_37995 3a85fef1936188a2aed8416256203d95 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 JV59_37995 3a85fef1936188a2aed8416256203d95 210 Gene3D G3DSA:1.10.10.10 139 207 1.0E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_37995 3a85fef1936188a2aed8416256203d95 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site JV59_37995 3a85fef1936188a2aed8416256203d95 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site JV59_37995 3a85fef1936188a2aed8416256203d95 210 SMART SM00419 160 208 4.2E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 JV59_37995 3a85fef1936188a2aed8416256203d95 210 SMART SM00100 2 122 3.7E-27 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JV59_37995 3a85fef1936188a2aed8416256203d95 210 SUPERFAMILY SSF46785 139 207 3.95E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_33505 36d5b56b32fbe06f716652e61cc452f6 153 Pfam PF02627 Carboxymuconolactone decarboxylase family 33 98 1.4E-13 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JV59_33505 36d5b56b32fbe06f716652e61cc452f6 153 SUPERFAMILY SSF69118 4 147 1.83E-34 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JV59_33505 36d5b56b32fbe06f716652e61cc452f6 153 Gene3D G3DSA:1.20.1290.10 1 148 1.6E-38 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JV59_33505 36d5b56b32fbe06f716652e61cc452f6 153 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 40 81 6.3E-15 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JV59_19720 a258ed9b88ff0cf463f774b86f5ba4a0 664 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 167 179 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 JV59_19720 a258ed9b88ff0cf463f774b86f5ba4a0 664 Gene3D G3DSA:1.10.510.10 55 295 1.3E-33 T 14-10-2018 JV59_19720 a258ed9b88ff0cf463f774b86f5ba4a0 664 SUPERFAMILY SSF56112 64 291 3.91E-36 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily JV59_19720 a258ed9b88ff0cf463f774b86f5ba4a0 664 Pfam PF00069 Protein kinase domain 64 242 2.0E-29 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JV59_19720 a258ed9b88ff0cf463f774b86f5ba4a0 664 SMART SM00220 63 295 3.0E-11 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JV59_31690 98cd2717b76b899d9d338376e91a9445 664 Pfam PF03572 Peptidase family S41 357 526 9.2E-52 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 JV59_31690 98cd2717b76b899d9d338376e91a9445 664 SMART SM00245 327 528 9.8E-68 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 JV59_31690 98cd2717b76b899d9d338376e91a9445 664 Gene3D G3DSA:3.90.226.10 326 545 1.2E-57 T 14-10-2018 JV59_31690 98cd2717b76b899d9d338376e91a9445 664 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 240 321 1.8E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JV59_31690 98cd2717b76b899d9d338376e91a9445 664 Gene3D G3DSA:2.30.42.10 236 321 1.6E-12 T 14-10-2018 JV59_31690 98cd2717b76b899d9d338376e91a9445 664 SUPERFAMILY SSF52096 167 532 7.95E-73 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JV59_31690 98cd2717b76b899d9d338376e91a9445 664 Pfam PF08180 B melanoma antigen family 9 37 7.4E-10 T 14-10-2018 IPR012530 B melanoma antigen-like JV59_31690 98cd2717b76b899d9d338376e91a9445 664 SMART SM00228 247 324 7.4E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JV59_31690 98cd2717b76b899d9d338376e91a9445 664 SUPERFAMILY SSF50156 245 323 2.11E-11 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 JV59_31690 98cd2717b76b899d9d338376e91a9445 664 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 531 663 2.5E-38 T 14-10-2018 IPR020992 Tail specific protease, C-terminal JV59_31690 98cd2717b76b899d9d338376e91a9445 664 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 200 548 8.8E-114 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 JV59_34390 fd4133c8096bc5bad0fbd097ed92f56d 483 Gene3D G3DSA:3.40.50.300 212 373 1.6E-45 T 14-10-2018 JV59_34390 fd4133c8096bc5bad0fbd097ed92f56d 483 Pfam PF00270 DEAD/DEAH box helicase 26 194 3.5E-48 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JV59_34390 fd4133c8096bc5bad0fbd097ed92f56d 483 SUPERFAMILY SSF52540 73 356 8.27E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_34390 fd4133c8096bc5bad0fbd097ed92f56d 483 Gene3D G3DSA:3.40.50.300 3 208 4.2E-75 T 14-10-2018 JV59_34390 fd4133c8096bc5bad0fbd097ed92f56d 483 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 470 49.856 T 14-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 JV59_34390 fd4133c8096bc5bad0fbd097ed92f56d 483 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JV59_34390 fd4133c8096bc5bad0fbd097ed92f56d 483 SMART SM00490 257 338 1.9E-31 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_34390 fd4133c8096bc5bad0fbd097ed92f56d 483 Pfam PF00271 Helicase conserved C-terminal domain 232 338 6.2E-27 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_34390 fd4133c8096bc5bad0fbd097ed92f56d 483 SMART SM00487 20 221 1.1E-62 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JV59_32500 f5f015759de875e70507a4fb8cff0594 237 Gene3D G3DSA:3.40.1410.10 91 225 6.3E-32 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JV59_32500 f5f015759de875e70507a4fb8cff0594 237 Gene3D G3DSA:1.10.10.10 2 70 7.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_32500 f5f015759de875e70507a4fb8cff0594 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 69 6.7E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_32500 f5f015759de875e70507a4fb8cff0594 237 Pfam PF07702 UTRA domain 93 229 5.8E-34 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 JV59_32500 f5f015759de875e70507a4fb8cff0594 237 SUPERFAMILY SSF46785 2 73 1.75E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_32500 f5f015759de875e70507a4fb8cff0594 237 SUPERFAMILY SSF64288 96 232 3.77E-39 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JV59_32500 f5f015759de875e70507a4fb8cff0594 237 SMART SM00345 10 69 1.6E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_32500 f5f015759de875e70507a4fb8cff0594 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 4.0E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_32500 f5f015759de875e70507a4fb8cff0594 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 4.0E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_32500 f5f015759de875e70507a4fb8cff0594 237 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 5 234 9.5E-93 T 14-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 JV59_32500 f5f015759de875e70507a4fb8cff0594 237 SMART SM00866 92 229 3.7E-31 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 JV59_27575 eac875baa1357b92c53f5b4f60d85289 292 SUPERFAMILY SSF51569 2 288 5.65E-99 T 14-10-2018 JV59_27575 eac875baa1357b92c53f5b4f60d85289 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JV59_27575 eac875baa1357b92c53f5b4f60d85289 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 JV59_27575 eac875baa1357b92c53f5b4f60d85289 292 Gene3D G3DSA:3.20.20.70 1 291 4.3E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_27575 eac875baa1357b92c53f5b4f60d85289 292 PIRSF PIRSF001365 1 290 1.7E-92 T 14-10-2018 IPR002220 DapA-like GO:0016829 JV59_27575 eac875baa1357b92c53f5b4f60d85289 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 1.6E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 JV59_27575 eac875baa1357b92c53f5b4f60d85289 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 1.6E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 JV59_27575 eac875baa1357b92c53f5b4f60d85289 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 1.6E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 JV59_27575 eac875baa1357b92c53f5b4f60d85289 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 1.6E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 JV59_27575 eac875baa1357b92c53f5b4f60d85289 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 288 3.4E-109 T 14-10-2018 IPR002220 DapA-like GO:0016829 JV59_27575 eac875baa1357b92c53f5b4f60d85289 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 287 3.3E-118 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JV59_27575 eac875baa1357b92c53f5b4f60d85289 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 65.351 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JV59_27575 eac875baa1357b92c53f5b4f60d85289 292 SMART SM01130 1 290 3.5E-141 T 14-10-2018 IPR002220 DapA-like GO:0016829 JV59_37415 833c93a6105dc4d34b29b79eb5f8f51e 409 Gene3D G3DSA:3.75.10.10 6 406 5.9E-148 T 14-10-2018 JV59_37415 833c93a6105dc4d34b29b79eb5f8f51e 409 TIGRFAM TIGR01078 arcA: arginine deiminase 4 409 3.4E-173 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JV59_37415 833c93a6105dc4d34b29b79eb5f8f51e 409 Gene3D G3DSA:1.10.3930.10 68 148 5.9E-148 T 14-10-2018 JV59_37415 833c93a6105dc4d34b29b79eb5f8f51e 409 SUPERFAMILY SSF55909 3 409 1.77E-129 T 14-10-2018 JV59_37415 833c93a6105dc4d34b29b79eb5f8f51e 409 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 5.7E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JV59_37415 833c93a6105dc4d34b29b79eb5f8f51e 409 PRINTS PR01466 Bacterial arginine deiminase signature 365 379 5.7E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JV59_37415 833c93a6105dc4d34b29b79eb5f8f51e 409 PRINTS PR01466 Bacterial arginine deiminase signature 388 406 5.7E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JV59_37415 833c93a6105dc4d34b29b79eb5f8f51e 409 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 5.7E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JV59_37415 833c93a6105dc4d34b29b79eb5f8f51e 409 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 5.7E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JV59_37415 833c93a6105dc4d34b29b79eb5f8f51e 409 PRINTS PR01466 Bacterial arginine deiminase signature 345 362 5.7E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JV59_37415 833c93a6105dc4d34b29b79eb5f8f51e 409 Hamap MF_00242 Arginine deiminase [arcA]. 1 409 45.078 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JV59_37415 833c93a6105dc4d34b29b79eb5f8f51e 409 PIRSF PIRSF006356 1 409 1.5E-156 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JV59_37415 833c93a6105dc4d34b29b79eb5f8f51e 409 Pfam PF02274 Amidinotransferase 19 406 4.4E-110 T 14-10-2018 JV59_22020 77dac475d9543e66cc8fd1c94e8da594 563 Gene3D G3DSA:3.20.20.80 50 464 1.2E-153 T 14-10-2018 JV59_22020 77dac475d9543e66cc8fd1c94e8da594 563 SMART SM00642 65 485 4.3E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_22020 77dac475d9543e66cc8fd1c94e8da594 563 PIRSF PIRSF003059 2 562 6.2E-212 T 14-10-2018 IPR016377 Sucrose/Glucosylglycerate phosphorylase-related JV59_22020 77dac475d9543e66cc8fd1c94e8da594 563 Pfam PF08533 Beta-galactosidase C-terminal domain 515 555 2.0E-4 T 14-10-2018 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 JV59_22020 77dac475d9543e66cc8fd1c94e8da594 563 Pfam PF00128 Alpha amylase, catalytic domain 80 343 2.0E-18 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_22020 77dac475d9543e66cc8fd1c94e8da594 563 Gene3D G3DSA:2.60.40.1180 509 562 3.0E-6 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta JV59_22020 77dac475d9543e66cc8fd1c94e8da594 563 Gene3D G3DSA:3.90.400.10 132 206 1.2E-153 T 14-10-2018 JV59_22020 77dac475d9543e66cc8fd1c94e8da594 563 SUPERFAMILY SSF51445 45 535 1.63E-77 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_28055 fe16c1144fe1f92805aa5c2d481a24a6 308 Gene3D G3DSA:3.40.800.20 1 301 2.2E-63 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 JV59_28055 fe16c1144fe1f92805aa5c2d481a24a6 308 SUPERFAMILY SSF52768 3 288 5.28E-77 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily JV59_28055 fe16c1144fe1f92805aa5c2d481a24a6 308 Pfam PF00850 Histone deacetylase domain 42 287 5.9E-47 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 JV59_28055 fe16c1144fe1f92805aa5c2d481a24a6 308 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 5.3E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 JV59_28055 fe16c1144fe1f92805aa5c2d481a24a6 308 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 5.3E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 JV59_28055 fe16c1144fe1f92805aa5c2d481a24a6 308 PRINTS PR01270 Histone deacetylase superfamily signature 230 240 5.3E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 JV59_36140 955d23da2efcce930a552dfed5625353 108 PRINTS PR01853 Bacterial YajC preprotein translocase signature 56 74 9.5E-16 T 14-10-2018 IPR003849 Preprotein translocase YajC JV59_36140 955d23da2efcce930a552dfed5625353 108 PRINTS PR01853 Bacterial YajC preprotein translocase signature 18 38 9.5E-16 T 14-10-2018 IPR003849 Preprotein translocase YajC JV59_36140 955d23da2efcce930a552dfed5625353 108 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 18 100 8.1E-30 T 14-10-2018 IPR003849 Preprotein translocase YajC JV59_36140 955d23da2efcce930a552dfed5625353 108 Pfam PF02699 Preprotein translocase subunit 20 97 9.8E-26 T 14-10-2018 IPR003849 Preprotein translocase YajC JV59_36140 955d23da2efcce930a552dfed5625353 108 SMART SM01323 16 100 8.0E-38 T 14-10-2018 IPR003849 Preprotein translocase YajC JV59_34425 64281966c45553e68b45ad4842fef20e 480 Gene3D G3DSA:2.40.33.10 74 172 8.0E-156 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_34425 64281966c45553e68b45ad4842fef20e 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 1.9E-56 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_34425 64281966c45553e68b45ad4842fef20e 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 1.9E-56 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_34425 64281966c45553e68b45ad4842fef20e 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 1.9E-56 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_34425 64281966c45553e68b45ad4842fef20e 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 1.9E-56 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_34425 64281966c45553e68b45ad4842fef20e 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 1.9E-56 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_34425 64281966c45553e68b45ad4842fef20e 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 1.9E-56 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_34425 64281966c45553e68b45ad4842fef20e 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 1.9E-56 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_34425 64281966c45553e68b45ad4842fef20e 480 SUPERFAMILY SSF52935 329 478 4.32E-37 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_34425 64281966c45553e68b45ad4842fef20e 480 Gene3D G3DSA:3.20.20.60 6 341 8.0E-156 T 14-10-2018 JV59_34425 64281966c45553e68b45ad4842fef20e 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 1.6E-129 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_34425 64281966c45553e68b45ad4842fef20e 480 Gene3D G3DSA:3.40.1380.20 342 476 8.0E-156 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_34425 64281966c45553e68b45ad4842fef20e 480 SUPERFAMILY SSF51621 5 346 6.63E-87 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JV59_34425 64281966c45553e68b45ad4842fef20e 480 SUPERFAMILY SSF50800 74 169 4.19E-26 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily JV59_34425 64281966c45553e68b45ad4842fef20e 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_34425 64281966c45553e68b45ad4842fef20e 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 478 6.6E-168 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_34425 64281966c45553e68b45ad4842fef20e 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 5.1E-29 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_35270 aeb603d6919989a9e800b4d761df5729 377 Gene3D G3DSA:1.20.1330.10 44 327 3.2E-78 T 14-10-2018 JV59_35270 aeb603d6919989a9e800b4d761df5729 377 Gene3D G3DSA:1.10.8.410 328 376 9.3E-22 T 14-10-2018 JV59_35270 aeb603d6919989a9e800b4d761df5729 377 SUPERFAMILY SSF64518 1 376 6.93E-98 T 14-10-2018 JV59_35270 aeb603d6919989a9e800b4d761df5729 377 PRINTS PR00207 Flagellin signature 111 134 5.7E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JV59_35270 aeb603d6919989a9e800b4d761df5729 377 PRINTS PR00207 Flagellin signature 37 54 5.7E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JV59_35270 aeb603d6919989a9e800b4d761df5729 377 PRINTS PR00207 Flagellin signature 76 95 5.7E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JV59_35270 aeb603d6919989a9e800b4d761df5729 377 Pfam PF07196 Flagellin hook IN motif 204 249 4.6E-9 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 JV59_35270 aeb603d6919989a9e800b4d761df5729 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 6.1E-27 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JV59_35270 aeb603d6919989a9e800b4d761df5729 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 5.9E-42 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JV59_35270 aeb603d6919989a9e800b4d761df5729 377 Gene3D G3DSA:3.30.70.2120 174 275 3.2E-78 T 14-10-2018 JV59_18115 68d27d151e789a4917373b856da1d2a8 174 Pfam PF00293 NUDIX domain 37 153 9.2E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JV59_18115 68d27d151e789a4917373b856da1d2a8 174 ProSitePatterns PS00893 Nudix box signature. 71 92 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JV59_18115 68d27d151e789a4917373b856da1d2a8 174 SUPERFAMILY SSF55811 9 171 5.15E-43 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JV59_18115 68d27d151e789a4917373b856da1d2a8 174 Gene3D G3DSA:3.90.79.10 6 170 7.5E-46 T 14-10-2018 JV59_36625 97ff3e7033b46015cdc3c1c192360622 307 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 44.008 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 JV59_36625 97ff3e7033b46015cdc3c1c192360622 307 Gene3D G3DSA:3.40.50.10490 8 225 1.4E-81 T 14-10-2018 JV59_36625 97ff3e7033b46015cdc3c1c192360622 307 Gene3D G3DSA:1.10.8.1080 226 304 8.7E-31 T 14-10-2018 JV59_36625 97ff3e7033b46015cdc3c1c192360622 307 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 14-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 JV59_36625 97ff3e7033b46015cdc3c1c192360622 307 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 13 303 4.9E-131 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 JV59_36625 97ff3e7033b46015cdc3c1c192360622 307 Pfam PF13580 SIS domain 49 172 5.0E-10 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 JV59_36625 97ff3e7033b46015cdc3c1c192360622 307 SUPERFAMILY SSF53697 12 256 5.56E-73 T 14-10-2018 JV59_02410 eb88224ed555dac1fa6c0682c54e3c21 369 Gene3D G3DSA:3.40.50.10990 206 368 3.8E-32 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 JV59_02410 eb88224ed555dac1fa6c0682c54e3c21 369 SUPERFAMILY SSF142695 205 367 1.96E-48 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 JV59_02410 eb88224ed555dac1fa6c0682c54e3c21 369 Gene3D G3DSA:3.90.870.10 1 205 5.3E-90 T 14-10-2018 JV59_02410 eb88224ed555dac1fa6c0682c54e3c21 369 SUPERFAMILY SSF55821 3 202 1.42E-87 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily JV59_02410 eb88224ed555dac1fa6c0682c54e3c21 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 1.1E-85 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JV59_02410 eb88224ed555dac1fa6c0682c54e3c21 369 PIRSF PIRSF001259 3 369 3.2E-131 T 14-10-2018 JV59_02410 eb88224ed555dac1fa6c0682c54e3c21 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 3.2E-76 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JV59_02410 eb88224ed555dac1fa6c0682c54e3c21 369 Pfam PF00925 GTP cyclohydrolase II 207 367 2.2E-40 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 JV59_02410 eb88224ed555dac1fa6c0682c54e3c21 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.822 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JV59_28250 5e760b0345c8c6df7e29a40cabeb3618 308 SUPERFAMILY SSF159501 26 276 8.11E-71 T 14-10-2018 JV59_28250 5e760b0345c8c6df7e29a40cabeb3618 308 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 48 247 3.1E-56 T 14-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN JV59_28250 5e760b0345c8c6df7e29a40cabeb3618 308 Gene3D G3DSA:1.10.8.760 148 212 3.2E-26 T 14-10-2018 JV59_28250 5e760b0345c8c6df7e29a40cabeb3618 308 PIRSF PIRSF020419 2 292 6.2E-79 T 14-10-2018 IPR016773 Ferric uptake regulator, CjrA, predicted JV59_28250 5e760b0345c8c6df7e29a40cabeb3618 308 Gene3D G3DSA:3.40.50.11550 38 262 3.2E-26 T 14-10-2018 JV59_30020 c1491189a09caa1e4b9d2dcd2df4834b 237 Gene3D G3DSA:2.40.30.20 103 204 1.3E-26 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_30020 c1491189a09caa1e4b9d2dcd2df4834b 237 Pfam PF00677 Lumazine binding domain 3 88 7.2E-17 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JV59_30020 c1491189a09caa1e4b9d2dcd2df4834b 237 Pfam PF00677 Lumazine binding domain 101 187 1.6E-21 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JV59_30020 c1491189a09caa1e4b9d2dcd2df4834b 237 PIRSF PIRSF000498 1 207 5.9E-57 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JV59_30020 c1491189a09caa1e4b9d2dcd2df4834b 237 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 200 1.0E-55 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JV59_30020 c1491189a09caa1e4b9d2dcd2df4834b 237 Gene3D G3DSA:2.40.30.20 1 93 8.6E-23 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_30020 c1491189a09caa1e4b9d2dcd2df4834b 237 SUPERFAMILY SSF63380 94 199 2.38E-27 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JV59_30020 c1491189a09caa1e4b9d2dcd2df4834b 237 SUPERFAMILY SSF63380 1 89 1.7E-20 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JV59_19425 1629207c7c3d67437d49808b3ccea215 856 SMART SM00448 729 842 8.3E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_19425 1629207c7c3d67437d49808b3ccea215 856 Pfam PF09308 LuxQ, periplasmic 42 276 7.7E-72 T 14-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 JV59_19425 1629207c7c3d67437d49808b3ccea215 856 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 591 703 2.6E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_19425 1629207c7c3d67437d49808b3ccea215 856 PRINTS PR00344 Bacterial sensor protein C-terminal signature 648 658 5.8E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_19425 1629207c7c3d67437d49808b3ccea215 856 PRINTS PR00344 Bacterial sensor protein C-terminal signature 630 644 5.8E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_19425 1629207c7c3d67437d49808b3ccea215 856 PRINTS PR00344 Bacterial sensor protein C-terminal signature 689 702 5.8E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_19425 1629207c7c3d67437d49808b3ccea215 856 PRINTS PR00344 Bacterial sensor protein C-terminal signature 665 683 5.8E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_19425 1629207c7c3d67437d49808b3ccea215 856 SUPERFAMILY SSF55785 348 456 1.96E-6 T 14-10-2018 IPR035965 PAS domain superfamily JV59_19425 1629207c7c3d67437d49808b3ccea215 856 Gene3D G3DSA:3.30.450.20 345 468 9.0E-7 T 14-10-2018 JV59_19425 1629207c7c3d67437d49808b3ccea215 856 SMART SM00388 478 543 4.4E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_19425 1629207c7c3d67437d49808b3ccea215 856 Gene3D G3DSA:1.10.287.130 469 543 1.1E-20 T 14-10-2018 JV59_19425 1629207c7c3d67437d49808b3ccea215 856 SUPERFAMILY SSF47384 466 544 1.8E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_19425 1629207c7c3d67437d49808b3ccea215 856 Gene3D G3DSA:3.40.50.2300 714 847 3.0E-30 T 14-10-2018 JV59_19425 1629207c7c3d67437d49808b3ccea215 856 SUPERFAMILY SSF52172 729 847 9.25E-27 T 14-10-2018 IPR011006 CheY-like superfamily JV59_19425 1629207c7c3d67437d49808b3ccea215 856 SUPERFAMILY SSF55874 532 709 9.56E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_19425 1629207c7c3d67437d49808b3ccea215 856 Pfam PF00072 Response regulator receiver domain 731 841 1.4E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_19425 1629207c7c3d67437d49808b3ccea215 856 SMART SM00387 590 705 1.8E-39 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_19425 1629207c7c3d67437d49808b3ccea215 856 SUPERFAMILY SSF103190 53 268 2.31E-68 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JV59_19425 1629207c7c3d67437d49808b3ccea215 856 ProDom PD142495 MEMBRANE SENSOR TRANSFERASE LUXQ 2.7.3.- TRANSMEMBRANE INNER PHOSPHORYLATION SENSORY AUTOINDUCER 10 356 7.0E-80 T 14-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 JV59_19425 1629207c7c3d67437d49808b3ccea215 856 Pfam PF00512 His Kinase A (phospho-acceptor) domain 479 543 7.7E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_19425 1629207c7c3d67437d49808b3ccea215 856 Gene3D G3DSA:3.30.450.220 50 206 3.7E-60 T 14-10-2018 JV59_19425 1629207c7c3d67437d49808b3ccea215 856 Gene3D G3DSA:3.30.565.10 544 710 1.0E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_39160 4678b0a01893f196e2cd7ddffaafa937 314 Gene3D G3DSA:3.20.10.10 138 289 1.2E-107 T 14-10-2018 JV59_39160 4678b0a01893f196e2cd7ddffaafa937 314 SUPERFAMILY SSF56752 7 307 1.23E-103 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 JV59_39160 4678b0a01893f196e2cd7ddffaafa937 314 Pfam PF01063 Amino-transferase class IV 36 268 4.1E-45 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 JV59_39160 4678b0a01893f196e2cd7ddffaafa937 314 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 JV59_39160 4678b0a01893f196e2cd7ddffaafa937 314 Gene3D G3DSA:3.30.470.10 10 127 1.2E-107 T 14-10-2018 JV59_39160 4678b0a01893f196e2cd7ddffaafa937 314 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 1.5E-142 T 14-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 JV59_30775 34c1abcd8978fdba9e1988c05d186b8a 677 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 321 341 5.0E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_30775 34c1abcd8978fdba9e1988c05d186b8a 677 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 511 538 5.0E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_30775 34c1abcd8978fdba9e1988c05d186b8a 677 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 540 569 5.0E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_30775 34c1abcd8978fdba9e1988c05d186b8a 677 SMART SM00283 412 674 3.8E-33 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_30775 34c1abcd8978fdba9e1988c05d186b8a 677 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 492 640 2.4E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_30775 34c1abcd8978fdba9e1988c05d186b8a 677 SUPERFAMILY SSF58104 366 675 2.88E-58 T 14-10-2018 JV59_30775 34c1abcd8978fdba9e1988c05d186b8a 677 Gene3D G3DSA:1.10.287.950 346 675 1.1E-58 T 14-10-2018 JV59_00035 c8d1ba2269129956aa1d8448ac64184f 115 Pfam PF01042 Endoribonuclease L-PSP 7 113 5.7E-24 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 JV59_00035 c8d1ba2269129956aa1d8448ac64184f 115 Gene3D G3DSA:3.30.1330.40 1 115 1.3E-41 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_00035 c8d1ba2269129956aa1d8448ac64184f 115 SUPERFAMILY SSF55298 4 113 1.29E-31 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_32425 1f64540ff656e370e7dce137ff011c79 474 Pfam PF00929 Exonuclease 11 190 3.3E-24 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III JV59_32425 1f64540ff656e370e7dce137ff011c79 474 SUPERFAMILY SSF53098 7 472 2.07E-135 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JV59_32425 1f64540ff656e370e7dce137ff011c79 474 Gene3D G3DSA:2.30.30.450 212 351 1.4E-55 T 14-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily JV59_32425 1f64540ff656e370e7dce137ff011c79 474 Pfam PF08411 Exonuclease C-terminal 210 470 8.6E-102 T 14-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 JV59_32425 1f64540ff656e370e7dce137ff011c79 474 Gene3D G3DSA:3.30.420.10 1 199 8.9E-74 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JV59_32425 1f64540ff656e370e7dce137ff011c79 474 PIRSF PIRSF000977 1 474 3.7E-197 T 14-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 JV59_32425 1f64540ff656e370e7dce137ff011c79 474 Gene3D G3DSA:1.20.1280.70 358 419 6.0E-26 T 14-10-2018 JV59_32425 1f64540ff656e370e7dce137ff011c79 474 SMART SM00479 8 201 0.0048 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III JV59_35090 8c3ee6040d76549f34e1f9c47166b116 337 PIRSF PIRSF000148 4 337 2.9E-132 T 14-10-2018 JV59_35090 8c3ee6040d76549f34e1f9c47166b116 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 3.7E-62 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 JV59_35090 8c3ee6040d76549f34e1f9c47166b116 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JV59_35090 8c3ee6040d76549f34e1f9c47166b116 337 SUPERFAMILY SSF51735 5 159 2.09E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_35090 8c3ee6040d76549f34e1f9c47166b116 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.295 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JV59_35090 8c3ee6040d76549f34e1f9c47166b116 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 7.9E-31 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 JV59_35090 8c3ee6040d76549f34e1f9c47166b116 337 Gene3D G3DSA:3.30.360.10 130 316 3.2E-151 T 14-10-2018 JV59_35090 8c3ee6040d76549f34e1f9c47166b116 337 Gene3D G3DSA:3.40.50.720 7 330 3.2E-151 T 14-10-2018 JV59_35090 8c3ee6040d76549f34e1f9c47166b116 337 SUPERFAMILY SSF55347 131 320 3.42E-77 T 14-10-2018 JV59_35090 8c3ee6040d76549f34e1f9c47166b116 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 3.2E-129 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JV59_35090 8c3ee6040d76549f34e1f9c47166b116 337 SMART SM00859 6 121 1.2E-39 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 JV59_33685 21b4e118579a6b709fb5789b66074774 224 TIGRFAM TIGR02681 phage_pRha: phage regulatory protein, Rha family 14 112 8.8E-28 T 14-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family JV59_33685 21b4e118579a6b709fb5789b66074774 224 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 24 107 1.1E-27 T 14-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family JV59_37480 bad31dd016ec7ad85843c99be41f12c2 165 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 20 161 1.1E-44 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 JV59_37480 bad31dd016ec7ad85843c99be41f12c2 165 Gene3D G3DSA:2.60.450.10 20 158 7.2E-37 T 14-10-2018 JV59_37480 bad31dd016ec7ad85843c99be41f12c2 165 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 161 23.629 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 JV59_37480 bad31dd016ec7ad85843c99be41f12c2 165 Pfam PF03968 OstA-like protein 30 141 2.0E-28 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal JV59_38435 60e2fde8ced5d9cf2f1b817745112855 142 SUPERFAMILY SSF55729 10 114 1.01E-12 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_38435 60e2fde8ced5d9cf2f1b817745112855 142 Pfam PF13673 Acetyltransferase (GNAT) domain 30 115 1.3E-7 T 14-10-2018 IPR000182 GNAT domain JV59_38435 60e2fde8ced5d9cf2f1b817745112855 142 Gene3D G3DSA:3.40.630.30 14 135 4.7E-10 T 14-10-2018 JV59_24755 7fc695815f452df5ca3fb8c14d761f88 462 Gene3D G3DSA:1.10.287.470 121 197 1.5E-8 T 14-10-2018 JV59_24755 7fc695815f452df5ca3fb8c14d761f88 462 Pfam PF13437 HlyD family secretion protein 314 429 5.0E-19 T 14-10-2018 JV59_24755 7fc695815f452df5ca3fb8c14d761f88 462 Pfam PF13533 Biotin-lipoyl like 92 135 1.0E-7 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain JV59_24755 7fc695815f452df5ca3fb8c14d761f88 462 ProSitePatterns PS00543 HlyD family secretion proteins signature. 426 448 - T 14-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 JV59_24755 7fc695815f452df5ca3fb8c14d761f88 462 Gene3D G3DSA:2.40.30.170 321 444 8.8E-12 T 14-10-2018 JV59_24755 7fc695815f452df5ca3fb8c14d761f88 462 Gene3D G3DSA:2.40.50.100 87 120 1.5E-8 T 14-10-2018 JV59_24755 7fc695815f452df5ca3fb8c14d761f88 462 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 326 347 2.6E-61 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JV59_24755 7fc695815f452df5ca3fb8c14d761f88 462 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 57 80 2.6E-61 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JV59_24755 7fc695815f452df5ca3fb8c14d761f88 462 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 383 406 2.6E-61 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JV59_24755 7fc695815f452df5ca3fb8c14d761f88 462 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 441 461 2.6E-61 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JV59_24755 7fc695815f452df5ca3fb8c14d761f88 462 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 99 119 2.6E-61 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JV59_24755 7fc695815f452df5ca3fb8c14d761f88 462 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 359 383 2.6E-61 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JV59_24755 7fc695815f452df5ca3fb8c14d761f88 462 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 426 441 2.6E-61 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JV59_24755 7fc695815f452df5ca3fb8c14d761f88 462 SUPERFAMILY SSF111369 96 224 1.12E-9 T 14-10-2018 JV59_24755 7fc695815f452df5ca3fb8c14d761f88 462 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 49 462 4.9E-119 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 JV59_20610 3ccf19b246352c2da6a6612f9b84202a 343 Gene3D G3DSA:3.90.180.10 18 337 3.7E-131 T 14-10-2018 JV59_20610 3ccf19b246352c2da6a6612f9b84202a 343 SMART SM00829 19 337 7.5E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JV59_20610 3ccf19b246352c2da6a6612f9b84202a 343 Gene3D G3DSA:3.40.50.720 128 309 3.7E-131 T 14-10-2018 JV59_20610 3ccf19b246352c2da6a6612f9b84202a 343 SUPERFAMILY SSF51735 125 304 1.01E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_20610 3ccf19b246352c2da6a6612f9b84202a 343 Pfam PF16884 N-terminal domain of oxidoreductase 7 113 1.8E-41 T 14-10-2018 JV59_20610 3ccf19b246352c2da6a6612f9b84202a 343 SUPERFAMILY SSF50129 5 144 1.13E-41 T 14-10-2018 IPR011032 GroES-like superfamily JV59_20610 3ccf19b246352c2da6a6612f9b84202a 343 Pfam PF00107 Zinc-binding dehydrogenase 159 294 1.7E-23 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JV59_22640 b700f759d69454aa80f1c3c8955e1c84 447 Pfam PF00860 Permease family 34 409 2.9E-51 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 JV59_22640 b700f759d69454aa80f1c3c8955e1c84 447 PIRSF PIRSF005353 9 447 4.3E-175 T 14-10-2018 IPR026033 Purine permease PbuG-like JV59_39595 ed4dfeaf3638dc52893f1f193b8fbb8c 260 Pfam PF01209 ubiE/COQ5 methyltransferase family 26 259 2.9E-102 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 JV59_39595 ed4dfeaf3638dc52893f1f193b8fbb8c 260 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 25 259 38.461 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 JV59_39595 ed4dfeaf3638dc52893f1f193b8fbb8c 260 Gene3D G3DSA:3.40.50.150 40 260 9.7E-75 T 14-10-2018 JV59_39595 ed4dfeaf3638dc52893f1f193b8fbb8c 260 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 34 259 2.7E-83 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 JV59_39595 ed4dfeaf3638dc52893f1f193b8fbb8c 260 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 167 181 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 JV59_39595 ed4dfeaf3638dc52893f1f193b8fbb8c 260 SUPERFAMILY SSF53335 27 258 1.7E-52 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_39595 ed4dfeaf3638dc52893f1f193b8fbb8c 260 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 45 60 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 JV59_30415 ef6cbe5c37362add3142d112be2eee2d 539 SUPERFAMILY SSF55874 389 534 1.14E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_30415 ef6cbe5c37362add3142d112be2eee2d 539 SUPERFAMILY SSF55785 215 306 6.98E-9 T 14-10-2018 IPR035965 PAS domain superfamily JV59_30415 ef6cbe5c37362add3142d112be2eee2d 539 Gene3D G3DSA:3.30.565.10 382 538 2.2E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_30415 ef6cbe5c37362add3142d112be2eee2d 539 Gene3D G3DSA:3.30.450.20 33 164 6.7E-39 T 14-10-2018 JV59_30415 ef6cbe5c37362add3142d112be2eee2d 539 Pfam PF17203 Single cache domain 3 36 168 1.1E-18 T 14-10-2018 IPR033463 Single cache domain 3 JV59_30415 ef6cbe5c37362add3142d112be2eee2d 539 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 218 274 1.5E-5 T 14-10-2018 IPR000014 PAS domain JV59_30415 ef6cbe5c37362add3142d112be2eee2d 539 Pfam PF00989 PAS fold 216 275 4.9E-7 T 14-10-2018 IPR013767 PAS fold GO:0006355 JV59_30415 ef6cbe5c37362add3142d112be2eee2d 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 2.8E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_30415 ef6cbe5c37362add3142d112be2eee2d 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 480 2.8E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_30415 ef6cbe5c37362add3142d112be2eee2d 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 2.8E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_30415 ef6cbe5c37362add3142d112be2eee2d 539 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 319 371 2.3E-7 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain JV59_30415 ef6cbe5c37362add3142d112be2eee2d 539 Gene3D G3DSA:3.30.450.20 199 310 1.1E-19 T 14-10-2018 JV59_30415 ef6cbe5c37362add3142d112be2eee2d 539 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 421 536 6.2E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_30415 ef6cbe5c37362add3142d112be2eee2d 539 SUPERFAMILY SSF103190 39 168 3.92E-34 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JV59_30415 ef6cbe5c37362add3142d112be2eee2d 539 SMART SM00387 418 537 4.1E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_30415 ef6cbe5c37362add3142d112be2eee2d 539 SMART SM00091 213 279 0.0019 T 14-10-2018 IPR000014 PAS domain JV59_30415 ef6cbe5c37362add3142d112be2eee2d 539 SUPERFAMILY SSF55890 322 390 2.09E-9 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 JV59_33780 5cbb891efd1cc41327d06d44fbea3058 246 PIRSF PIRSF000371 2 47 1.2E-10 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 JV59_33780 5cbb891efd1cc41327d06d44fbea3058 246 PIRSF PIRSF000371 44 245 3.0E-44 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 JV59_33780 5cbb891efd1cc41327d06d44fbea3058 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 JV59_33780 5cbb891efd1cc41327d06d44fbea3058 246 SUPERFAMILY SSF102114 23 220 4.51E-29 T 14-10-2018 JV59_33780 5cbb891efd1cc41327d06d44fbea3058 246 Pfam PF13353 4Fe-4S single cluster domain 16 136 1.2E-20 T 14-10-2018 JV59_33780 5cbb891efd1cc41327d06d44fbea3058 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 1.2E-107 T 14-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 JV59_33780 5cbb891efd1cc41327d06d44fbea3058 246 Gene3D G3DSA:3.20.20.70 2 246 1.0E-104 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_33780 5cbb891efd1cc41327d06d44fbea3058 246 Pfam PF04055 Radical SAM superfamily 24 178 2.9E-32 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JV59_17130 28593d90dbbe3d26da95b18482ff9b85 497 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 271 283 - T 14-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JV59_17130 28593d90dbbe3d26da95b18482ff9b85 497 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 171 2.9E-35 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 JV59_17130 28593d90dbbe3d26da95b18482ff9b85 497 Gene3D G3DSA:1.20.5.320 454 489 1.0E-16 T 14-10-2018 JV59_17130 28593d90dbbe3d26da95b18482ff9b85 497 SUPERFAMILY SSF51735 5 172 4.53E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_17130 28593d90dbbe3d26da95b18482ff9b85 497 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 2.5E-53 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JV59_17130 28593d90dbbe3d26da95b18482ff9b85 497 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 375 397 2.5E-53 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JV59_17130 28593d90dbbe3d26da95b18482ff9b85 497 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 73 102 2.5E-53 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JV59_17130 28593d90dbbe3d26da95b18482ff9b85 497 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 267 294 2.5E-53 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JV59_17130 28593d90dbbe3d26da95b18482ff9b85 497 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 185 213 2.5E-53 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JV59_17130 28593d90dbbe3d26da95b18482ff9b85 497 Gene3D G3DSA:3.40.50.720 1 197 5.1E-49 T 14-10-2018 JV59_17130 28593d90dbbe3d26da95b18482ff9b85 497 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 489 1.5E-170 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JV59_17130 28593d90dbbe3d26da95b18482ff9b85 497 SMART SM01350 196 488 1.7E-184 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JV59_17130 28593d90dbbe3d26da95b18482ff9b85 497 Gene3D G3DSA:1.10.1040.10 198 452 3.4E-98 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JV59_17130 28593d90dbbe3d26da95b18482ff9b85 497 SUPERFAMILY SSF48179 194 490 1.53E-115 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JV59_17130 28593d90dbbe3d26da95b18482ff9b85 497 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 196 487 3.5E-118 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JV59_17130 28593d90dbbe3d26da95b18482ff9b85 497 PIRSF PIRSF000109 1 496 1.9E-170 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JV59_17285 38974ed4dbf4baf37d9bdc548e5da44a 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 319 1.4E-52 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 JV59_05465 94e75b28122e113472af7ebc50a0bd3a 335 Pfam PF13377 Periplasmic binding protein-like domain 174 333 1.4E-27 T 14-10-2018 JV59_05465 94e75b28122e113472af7ebc50a0bd3a 335 SUPERFAMILY SSF53822 64 333 9.59E-55 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_05465 94e75b28122e113472af7ebc50a0bd3a 335 Gene3D G3DSA:3.40.50.2300 158 335 1.8E-43 T 14-10-2018 JV59_05465 94e75b28122e113472af7ebc50a0bd3a 335 SMART SM00354 7 77 2.1E-27 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_05465 94e75b28122e113472af7ebc50a0bd3a 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 54 4.5E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_05465 94e75b28122e113472af7ebc50a0bd3a 335 Gene3D G3DSA:3.40.50.2300 65 154 1.1E-11 T 14-10-2018 JV59_05465 94e75b28122e113472af7ebc50a0bd3a 335 Gene3D G3DSA:1.10.260.40 1 64 4.8E-23 T 14-10-2018 JV59_05465 94e75b28122e113472af7ebc50a0bd3a 335 SUPERFAMILY SSF47413 7 65 9.52E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_28325 a235ffa4ecd297a1658be73cb78eefc4 232 PIRSF PIRSF037208 1 232 2.7E-81 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 JV59_28325 a235ffa4ecd297a1658be73cb78eefc4 232 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 2.0E-17 T 14-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 JV59_28325 a235ffa4ecd297a1658be73cb78eefc4 232 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 6 231 35.559 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 JV59_28325 a235ffa4ecd297a1658be73cb78eefc4 232 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 107 225 2.6E-32 T 14-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 JV59_28325 a235ffa4ecd297a1658be73cb78eefc4 232 SUPERFAMILY SSF55729 80 231 1.98E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_28085 a9a93a832dbbcd070260574a2792a987 684 PIRSF PIRSF036431 2 684 2.8E-141 T 14-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) JV59_28085 a9a93a832dbbcd070260574a2792a987 684 SUPERFAMILY SSF47384 453 529 2.35E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_28085 a9a93a832dbbcd070260574a2792a987 684 Gene3D G3DSA:3.30.450.20 56 170 3.5E-11 T 14-10-2018 JV59_28085 a9a93a832dbbcd070260574a2792a987 684 SMART SM00387 574 684 1.7E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_28085 a9a93a832dbbcd070260574a2792a987 684 SMART SM00091 310 376 0.0047 T 14-10-2018 IPR000014 PAS domain JV59_28085 a9a93a832dbbcd070260574a2792a987 684 Gene3D G3DSA:3.30.565.10 530 681 7.7E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_28085 a9a93a832dbbcd070260574a2792a987 684 Pfam PF13426 PAS domain 321 425 6.1E-8 T 14-10-2018 IPR000014 PAS domain JV59_28085 a9a93a832dbbcd070260574a2792a987 684 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 306 433 3.1E-14 T 14-10-2018 IPR000014 PAS domain JV59_28085 a9a93a832dbbcd070260574a2792a987 684 SMART SM00086 386 426 0.0069 T 14-10-2018 IPR001610 PAC motif JV59_28085 a9a93a832dbbcd070260574a2792a987 684 SUPERFAMILY SSF55785 322 435 5.48E-14 T 14-10-2018 IPR035965 PAS domain superfamily JV59_28085 a9a93a832dbbcd070260574a2792a987 684 Gene3D G3DSA:1.10.287.130 443 529 1.4E-12 T 14-10-2018 JV59_28085 a9a93a832dbbcd070260574a2792a987 684 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 681 8.2E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_28085 a9a93a832dbbcd070260574a2792a987 684 Gene3D G3DSA:3.30.450.20 305 429 2.4E-14 T 14-10-2018 JV59_28085 a9a93a832dbbcd070260574a2792a987 684 SUPERFAMILY SSF55874 533 680 3.41E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_28085 a9a93a832dbbcd070260574a2792a987 684 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 2.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_28085 a9a93a832dbbcd070260574a2792a987 684 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 627 2.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_28085 a9a93a832dbbcd070260574a2792a987 684 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 2.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_28085 a9a93a832dbbcd070260574a2792a987 684 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 641 2.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_40210 fa33c7175adb858490463ce20046100e 223 Pfam PF01902 Diphthamide synthase 5 212 9.4E-23 T 14-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 JV59_40210 fa33c7175adb858490463ce20046100e 223 Gene3D G3DSA:3.90.1490.10 144 220 2.1E-5 T 14-10-2018 JV59_40210 fa33c7175adb858490463ce20046100e 223 SUPERFAMILY SSF52402 1 218 1.47E-51 T 14-10-2018 JV59_40210 fa33c7175adb858490463ce20046100e 223 Gene3D G3DSA:3.40.50.620 1 143 1.2E-18 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_22240 ca92c37f23a296e79e69271b71709e31 519 SUPERFAMILY SSF58104 210 519 1.44E-76 T 14-10-2018 JV59_22240 ca92c37f23a296e79e69271b71709e31 519 Gene3D G3DSA:1.10.287.950 188 519 3.3E-72 T 14-10-2018 JV59_22240 ca92c37f23a296e79e69271b71709e31 519 SUPERFAMILY SSF103190 30 164 2.16E-21 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JV59_22240 ca92c37f23a296e79e69271b71709e31 519 Pfam PF17203 Single cache domain 3 55 164 4.5E-12 T 14-10-2018 IPR033463 Single cache domain 3 JV59_22240 ca92c37f23a296e79e69271b71709e31 519 SMART SM00304 188 242 2.0E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_22240 ca92c37f23a296e79e69271b71709e31 519 SMART SM00283 257 518 1.1E-75 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_22240 ca92c37f23a296e79e69271b71709e31 519 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 302 484 4.3E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_22240 ca92c37f23a296e79e69271b71709e31 519 Pfam PF00672 HAMP domain 190 237 8.2E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_19680 4c8cc37cb778d007af1d09830e21d616 1131 Pfam PF14331 ImcF-related N-terminal domain 154 407 3.5E-45 T 14-10-2018 IPR025743 ImcF-related, N-terminal domain JV59_19680 4c8cc37cb778d007af1d09830e21d616 1131 Pfam PF06761 Intracellular multiplication and human macrophage-killing 485 754 1.5E-42 T 14-10-2018 IPR009612 ImcF-related JV59_19680 4c8cc37cb778d007af1d09830e21d616 1131 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 90 1127 1.0E-174 T 14-10-2018 IPR017731 Type VI secretion system, IcmF JV59_19680 4c8cc37cb778d007af1d09830e21d616 1131 Pfam PF06744 Type VI secretion protein IcmF C-terminal 879 1078 1.6E-46 T 14-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal JV59_36080 401840597fee2f0063fbfdc0bea0d5a5 499 SUPERFAMILY SSF53067 10 130 4.53E-35 T 14-10-2018 JV59_36080 401840597fee2f0063fbfdc0bea0d5a5 499 PIRSF PIRSF001267 1 499 5.4E-197 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 JV59_36080 401840597fee2f0063fbfdc0bea0d5a5 499 Gene3D G3DSA:3.30.420.150 114 292 4.9E-90 T 14-10-2018 JV59_36080 401840597fee2f0063fbfdc0bea0d5a5 499 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 10 303 6.0E-100 T 14-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 JV59_36080 401840597fee2f0063fbfdc0bea0d5a5 499 SUPERFAMILY SSF53067 134 306 3.89E-46 T 14-10-2018 JV59_36080 401840597fee2f0063fbfdc0bea0d5a5 499 Gene3D G3DSA:3.30.420.40 11 299 4.9E-90 T 14-10-2018 JV59_36080 401840597fee2f0063fbfdc0bea0d5a5 499 SUPERFAMILY SSF109604 310 498 2.51E-42 T 14-10-2018 JV59_36080 401840597fee2f0063fbfdc0bea0d5a5 499 Pfam PF02541 Ppx/GppA phosphatase family 23 304 3.6E-81 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 JV59_36080 401840597fee2f0063fbfdc0bea0d5a5 499 Gene3D G3DSA:1.10.3210.10 307 499 4.7E-55 T 14-10-2018 JV59_38490 ef7aad33899afe7fde942bb1b4320686 218 Pfam PF13489 Methyltransferase domain 30 156 1.6E-10 T 14-10-2018 JV59_38490 ef7aad33899afe7fde942bb1b4320686 218 Gene3D G3DSA:3.40.50.150 11 188 2.6E-20 T 14-10-2018 JV59_38490 ef7aad33899afe7fde942bb1b4320686 218 SUPERFAMILY SSF53335 18 178 9.71E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_20820 5af26a5e5296cc4c60a7bea9807b12f1 453 Pfam PF00990 Diguanylate cyclase, GGDEF domain 274 425 1.9E-46 T 14-10-2018 IPR000160 GGDEF domain JV59_20820 5af26a5e5296cc4c60a7bea9807b12f1 453 Gene3D G3DSA:1.20.1480.50 153 256 4.0E-5 T 14-10-2018 JV59_20820 5af26a5e5296cc4c60a7bea9807b12f1 453 Gene3D G3DSA:3.30.70.270 258 432 2.3E-53 T 14-10-2018 JV59_20820 5af26a5e5296cc4c60a7bea9807b12f1 453 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 272 427 4.0E-45 T 14-10-2018 IPR000160 GGDEF domain JV59_20820 5af26a5e5296cc4c60a7bea9807b12f1 453 SUPERFAMILY SSF55073 278 428 8.63E-47 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_20820 5af26a5e5296cc4c60a7bea9807b12f1 453 SMART SM00267 262 433 4.0E-53 T 14-10-2018 IPR000160 GGDEF domain JV59_23520 d72c7949d2826f915658bf5c6fcab18b 307 Pfam PF03466 LysR substrate binding domain 93 290 1.4E-26 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_23520 d72c7949d2826f915658bf5c6fcab18b 307 SUPERFAMILY SSF53850 87 290 8.38E-39 T 14-10-2018 JV59_23520 d72c7949d2826f915658bf5c6fcab18b 307 Gene3D G3DSA:1.10.10.10 1 84 2.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_23520 d72c7949d2826f915658bf5c6fcab18b 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 2.2E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_23520 d72c7949d2826f915658bf5c6fcab18b 307 Gene3D G3DSA:3.40.190.10 167 265 5.0E-50 T 14-10-2018 JV59_23520 d72c7949d2826f915658bf5c6fcab18b 307 Gene3D G3DSA:3.40.190.10 87 288 5.0E-50 T 14-10-2018 JV59_23520 d72c7949d2826f915658bf5c6fcab18b 307 SUPERFAMILY SSF46785 3 82 1.48E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_35775 5f51e1737dc6e922b16f7fc5a39994ea 1063 Gene3D G3DSA:3.40.50.300 516 797 3.0E-36 T 14-10-2018 JV59_35775 5f51e1737dc6e922b16f7fc5a39994ea 1063 SUPERFAMILY SSF52540 464 735 9.77E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_35775 5f51e1737dc6e922b16f7fc5a39994ea 1063 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 5 215 9.4E-40 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 JV59_35775 5f51e1737dc6e922b16f7fc5a39994ea 1063 SUPERFAMILY SSF52540 289 503 5.52E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_35775 5f51e1737dc6e922b16f7fc5a39994ea 1063 Gene3D G3DSA:3.40.50.300 324 515 2.6E-53 T 14-10-2018 JV59_35775 5f51e1737dc6e922b16f7fc5a39994ea 1063 SMART SM00487 321 528 1.0E-7 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JV59_35775 5f51e1737dc6e922b16f7fc5a39994ea 1063 Pfam PF04851 Type III restriction enzyme, res subunit 324 497 4.4E-20 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 JV59_35775 5f51e1737dc6e922b16f7fc5a39994ea 1063 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 10 752 8.0E-165 T 14-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 JV59_38315 23cdf1ba75c1593d721db6c80b352a60 605 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 7.7E-9 T 14-10-2018 JV59_38315 23cdf1ba75c1593d721db6c80b352a60 605 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 7.7E-9 T 14-10-2018 JV59_38315 23cdf1ba75c1593d721db6c80b352a60 605 Gene3D G3DSA:4.10.80.40 543 577 4.7E-14 T 14-10-2018 JV59_38315 23cdf1ba75c1593d721db6c80b352a60 605 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 4.2E-37 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_38315 23cdf1ba75c1593d721db6c80b352a60 605 SUPERFAMILY SSF46977 444 582 8.5E-43 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_38315 23cdf1ba75c1593d721db6c80b352a60 605 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_38315 23cdf1ba75c1593d721db6c80b352a60 605 Gene3D G3DSA:1.20.58.100 424 538 5.7E-35 T 14-10-2018 JV59_38315 23cdf1ba75c1593d721db6c80b352a60 605 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 5.9E-5 T 14-10-2018 JV59_38315 23cdf1ba75c1593d721db6c80b352a60 605 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 5.9E-5 T 14-10-2018 JV59_38315 23cdf1ba75c1593d721db6c80b352a60 605 Gene3D G3DSA:3.50.50.60 7 409 2.3E-161 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_38315 23cdf1ba75c1593d721db6c80b352a60 605 SUPERFAMILY SSF56425 227 358 4.04E-41 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_38315 23cdf1ba75c1593d721db6c80b352a60 605 Pfam PF00890 FAD binding domain 7 397 3.1E-113 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_38315 23cdf1ba75c1593d721db6c80b352a60 605 PIRSF PIRSF000171 1 574 1.2E-44 T 14-10-2018 JV59_38315 23cdf1ba75c1593d721db6c80b352a60 605 Gene3D G3DSA:3.90.700.10 237 363 2.3E-161 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_38315 23cdf1ba75c1593d721db6c80b352a60 605 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 7.0E-234 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_38315 23cdf1ba75c1593d721db6c80b352a60 605 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 14-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 JV59_38315 23cdf1ba75c1593d721db6c80b352a60 605 SUPERFAMILY SSF51905 2 441 1.99E-74 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_34060 96c87f1684bc77fdf7b677944ecbf170 459 SUPERFAMILY SSF141322 387 453 4.58E-9 T 14-10-2018 JV59_34060 96c87f1684bc77fdf7b677944ecbf170 459 SUPERFAMILY SSF52096 10 216 5.75E-29 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JV59_34060 96c87f1684bc77fdf7b677944ecbf170 459 Gene3D G3DSA:3.90.226.10 16 266 3.6E-58 T 14-10-2018 JV59_34060 96c87f1684bc77fdf7b677944ecbf170 459 Pfam PF01957 NfeD-like C-terminal, partner-binding 314 454 3.9E-35 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain JV59_34060 96c87f1684bc77fdf7b677944ecbf170 459 Gene3D G3DSA:2.40.50.140 389 459 1.9E-14 T 14-10-2018 JV59_35405 2f9c404d1de73c0f92d97caece8b661b 363 Gene3D G3DSA:3.30.2300.20 80 177 7.9E-39 T 14-10-2018 JV59_35405 2f9c404d1de73c0f92d97caece8b661b 363 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 357 84.186 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 JV59_35405 2f9c404d1de73c0f92d97caece8b661b 363 Gene3D G3DSA:3.30.70.2810 1 79 5.5E-33 T 14-10-2018 JV59_35405 2f9c404d1de73c0f92d97caece8b661b 363 SUPERFAMILY SSF53335 186 281 1.38E-11 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_35405 2f9c404d1de73c0f92d97caece8b661b 363 Pfam PF01728 FtsJ-like methyltransferase 188 282 3.4E-6 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 JV59_35405 2f9c404d1de73c0f92d97caece8b661b 363 PIRSF PIRSF028774 1 362 2.9E-187 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 JV59_35405 2f9c404d1de73c0f92d97caece8b661b 363 Gene3D G3DSA:3.40.50.150 178 358 3.1E-52 T 14-10-2018 JV59_36405 2b276455da18b08ad524ce5832ce8e0b 695 Pfam PF14492 Elongation Factor G, domain II 401 474 3.0E-29 T 14-10-2018 JV59_36405 2b276455da18b08ad524ce5832ce8e0b 695 Gene3D G3DSA:2.40.30.10 290 402 7.2E-37 T 14-10-2018 JV59_36405 2b276455da18b08ad524ce5832ce8e0b 695 Pfam PF03764 Elongation factor G, domain IV 476 594 3.4E-42 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 JV59_36405 2b276455da18b08ad524ce5832ce8e0b 695 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_36405 2b276455da18b08ad524ce5832ce8e0b 695 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_36405 2b276455da18b08ad524ce5832ce8e0b 695 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_36405 2b276455da18b08ad524ce5832ce8e0b 695 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_36405 2b276455da18b08ad524ce5832ce8e0b 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 1.0E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JV59_36405 2b276455da18b08ad524ce5832ce8e0b 695 SMART SM00838 597 684 7.4E-44 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like JV59_36405 2b276455da18b08ad524ce5832ce8e0b 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site JV59_36405 2b276455da18b08ad524ce5832ce8e0b 695 Gene3D G3DSA:3.30.70.240 601 671 1.7E-80 T 14-10-2018 JV59_36405 2b276455da18b08ad524ce5832ce8e0b 695 Pfam PF03144 Elongation factor Tu domain 2 321 388 1.8E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 JV59_36405 2b276455da18b08ad524ce5832ce8e0b 695 SUPERFAMILY SSF52540 3 277 3.18E-99 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_36405 2b276455da18b08ad524ce5832ce8e0b 695 Gene3D G3DSA:3.40.50.300 1 289 4.3E-102 T 14-10-2018 JV59_36405 2b276455da18b08ad524ce5832ce8e0b 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 689 6.9E-290 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JV59_36405 2b276455da18b08ad524ce5832ce8e0b 695 SUPERFAMILY SSF50447 261 399 8.62E-32 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JV59_36405 2b276455da18b08ad524ce5832ce8e0b 695 Hamap MF_00054_B Elongation factor G [fusA]. 3 688 101.433 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JV59_36405 2b276455da18b08ad524ce5832ce8e0b 695 SUPERFAMILY SSF54211 476 595 1.24E-38 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JV59_36405 2b276455da18b08ad524ce5832ce8e0b 695 SUPERFAMILY SSF54980 401 478 4.32E-21 T 14-10-2018 IPR035647 EF-G domain III/V-like JV59_36405 2b276455da18b08ad524ce5832ce8e0b 695 Pfam PF00009 Elongation factor Tu GTP binding domain 6 277 2.4E-60 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_36405 2b276455da18b08ad524ce5832ce8e0b 695 Pfam PF00679 Elongation factor G C-terminus 597 683 8.2E-28 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like JV59_36405 2b276455da18b08ad524ce5832ce8e0b 695 SMART SM00889 477 595 1.1E-60 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 JV59_36405 2b276455da18b08ad524ce5832ce8e0b 695 Gene3D G3DSA:3.30.230.10 481 684 1.7E-80 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JV59_36405 2b276455da18b08ad524ce5832ce8e0b 695 SUPERFAMILY SSF54980 600 689 9.71E-28 T 14-10-2018 IPR035647 EF-G domain III/V-like JV59_36405 2b276455da18b08ad524ce5832ce8e0b 695 Gene3D G3DSA:3.30.70.870 403 480 2.5E-26 T 14-10-2018 JV59_19645 bceb70e9146ce993da10aafa292160df 1015 SUPERFAMILY SSF49785 8 208 6.94E-61 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily JV59_19645 bceb70e9146ce993da10aafa292160df 1015 Pfam PF16353 Domain of unknown function(DUF4981) 631 717 6.5E-14 T 14-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 JV59_19645 bceb70e9146ce993da10aafa292160df 1015 Gene3D G3DSA:2.60.40.10 212 323 6.8E-28 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_19645 bceb70e9146ce993da10aafa292160df 1015 Gene3D G3DSA:2.60.40.10 621 724 4.6E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_19645 bceb70e9146ce993da10aafa292160df 1015 PRINTS PR00132 Glycosyl hydrolase family 2 signature 334 348 8.5E-37 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 JV59_19645 bceb70e9146ce993da10aafa292160df 1015 PRINTS PR00132 Glycosyl hydrolase family 2 signature 365 383 8.5E-37 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 JV59_19645 bceb70e9146ce993da10aafa292160df 1015 PRINTS PR00132 Glycosyl hydrolase family 2 signature 138 153 8.5E-37 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 JV59_19645 bceb70e9146ce993da10aafa292160df 1015 PRINTS PR00132 Glycosyl hydrolase family 2 signature 523 538 8.5E-37 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 JV59_19645 bceb70e9146ce993da10aafa292160df 1015 PRINTS PR00132 Glycosyl hydrolase family 2 signature 437 452 8.5E-37 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 JV59_19645 bceb70e9146ce993da10aafa292160df 1015 Gene3D G3DSA:3.20.20.80 324 616 5.7E-121 T 14-10-2018 JV59_19645 bceb70e9146ce993da10aafa292160df 1015 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 375 400 - T 14-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 JV59_19645 bceb70e9146ce993da10aafa292160df 1015 SUPERFAMILY SSF49303 613 721 2.45E-21 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily JV59_19645 bceb70e9146ce993da10aafa292160df 1015 Gene3D G3DSA:2.70.98.10 731 1015 1.6E-87 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 JV59_19645 bceb70e9146ce993da10aafa292160df 1015 SUPERFAMILY SSF49303 213 323 1.9E-26 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily JV59_19645 bceb70e9146ce993da10aafa292160df 1015 Pfam PF02929 Beta galactosidase small chain 749 1014 6.1E-66 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 JV59_19645 bceb70e9146ce993da10aafa292160df 1015 Gene3D G3DSA:2.60.120.260 1 210 5.0E-76 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily JV59_19645 bceb70e9146ce993da10aafa292160df 1015 SUPERFAMILY SSF51445 325 615 1.62E-95 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_19645 bceb70e9146ce993da10aafa292160df 1015 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 45 210 8.5E-52 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 JV59_19645 bceb70e9146ce993da10aafa292160df 1015 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 325 618 2.4E-108 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 JV59_19645 bceb70e9146ce993da10aafa292160df 1015 SMART SM01038 744 1015 1.0E-109 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 JV59_19645 bceb70e9146ce993da10aafa292160df 1015 Pfam PF00703 Glycosyl hydrolases family 2 213 323 5.6E-17 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 JV59_19645 bceb70e9146ce993da10aafa292160df 1015 SUPERFAMILY SSF74650 732 1014 4.87E-90 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 JV59_19005 1ade549b3fb73d1662006155b44548c8 487 Gene3D G3DSA:3.40.50.880 254 431 5.4E-19 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_19005 1ade549b3fb73d1662006155b44548c8 487 SUPERFAMILY SSF52540 7 239 4.09E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_19005 1ade549b3fb73d1662006155b44548c8 487 SUPERFAMILY SSF52317 255 446 2.9E-36 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_19005 1ade549b3fb73d1662006155b44548c8 487 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 254 438 1.1E-56 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 JV59_19005 1ade549b3fb73d1662006155b44548c8 487 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 233 6.0E-23 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JV59_19005 1ade549b3fb73d1662006155b44548c8 487 Gene3D G3DSA:3.40.50.300 4 246 3.1E-55 T 14-10-2018 JV59_19005 1ade549b3fb73d1662006155b44548c8 487 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 487 195.039 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 JV59_19005 1ade549b3fb73d1662006155b44548c8 487 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 8 481 2.1E-153 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 JV59_19655 3cdf5b5f70889297a59c1d370771e76d 441 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 440 2.6E-147 T 14-10-2018 IPR010263 Type VI secretion protein, VC_A0114 JV59_19655 3cdf5b5f70889297a59c1d370771e76d 441 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 439 9.3E-138 T 14-10-2018 IPR010263 Type VI secretion protein, VC_A0114 JV59_00085 f95a8228f2b6f0456b8cceeee7b2f0fb 172 SUPERFAMILY SSF52540 4 169 4.58E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_00085 f95a8228f2b6f0456b8cceeee7b2f0fb 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 JV59_00085 f95a8228f2b6f0456b8cceeee7b2f0fb 172 Gene3D G3DSA:3.40.50.300 1 171 1.0E-55 T 14-10-2018 JV59_00085 f95a8228f2b6f0456b8cceeee7b2f0fb 172 Pfam PF01202 Shikimate kinase 13 169 7.1E-57 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 JV59_00085 f95a8228f2b6f0456b8cceeee7b2f0fb 172 PRINTS PR01100 Shikimate kinase family signature 7 22 1.5E-28 T 14-10-2018 JV59_00085 f95a8228f2b6f0456b8cceeee7b2f0fb 172 PRINTS PR01100 Shikimate kinase family signature 31 44 1.5E-28 T 14-10-2018 JV59_00085 f95a8228f2b6f0456b8cceeee7b2f0fb 172 PRINTS PR01100 Shikimate kinase family signature 59 67 1.5E-28 T 14-10-2018 JV59_00085 f95a8228f2b6f0456b8cceeee7b2f0fb 172 PRINTS PR01100 Shikimate kinase family signature 98 115 1.5E-28 T 14-10-2018 JV59_00085 f95a8228f2b6f0456b8cceeee7b2f0fb 172 PRINTS PR01100 Shikimate kinase family signature 77 86 1.5E-28 T 14-10-2018 JV59_00085 f95a8228f2b6f0456b8cceeee7b2f0fb 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 29.327 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 JV59_18505 9019cd0595c1236257239ee0041049d6 322 Gene3D G3DSA:3.30.70.270 165 322 2.2E-36 T 14-10-2018 JV59_18505 9019cd0595c1236257239ee0041049d6 322 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 164 322 5.4E-34 T 14-10-2018 IPR000160 GGDEF domain JV59_18505 9019cd0595c1236257239ee0041049d6 322 SMART SM00065 17 164 0.0014 T 14-10-2018 IPR003018 GAF domain GO:0005515 JV59_18505 9019cd0595c1236257239ee0041049d6 322 Pfam PF13185 GAF domain 23 151 1.2E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 JV59_18505 9019cd0595c1236257239ee0041049d6 322 SMART SM00267 156 321 4.7E-22 T 14-10-2018 IPR000160 GGDEF domain JV59_18505 9019cd0595c1236257239ee0041049d6 322 Pfam PF00990 Diguanylate cyclase, GGDEF domain 168 321 5.0E-32 T 14-10-2018 IPR000160 GGDEF domain JV59_18505 9019cd0595c1236257239ee0041049d6 322 SUPERFAMILY SSF55781 21 167 2.84E-21 T 14-10-2018 JV59_18505 9019cd0595c1236257239ee0041049d6 322 SUPERFAMILY SSF55073 172 321 1.18E-31 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_18505 9019cd0595c1236257239ee0041049d6 322 Gene3D G3DSA:3.30.450.40 20 164 2.1E-16 T 14-10-2018 IPR029016 GAF-like domain superfamily JV59_39045 18a61c0cc26c62f60e3df670652ed25e 161 Gene3D G3DSA:3.40.50.7700 1 161 9.3E-73 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 JV59_39045 18a61c0cc26c62f60e3df670652ed25e 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.424 T 14-10-2018 IPR033747 Class I PurE JV59_39045 18a61c0cc26c62f60e3df670652ed25e 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 157 1.0E-66 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 JV59_39045 18a61c0cc26c62f60e3df670652ed25e 161 Pfam PF00731 AIR carboxylase 2 150 7.6E-65 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 JV59_39045 18a61c0cc26c62f60e3df670652ed25e 161 SMART SM01001 1 152 3.1E-103 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 JV59_39045 18a61c0cc26c62f60e3df670652ed25e 161 PIRSF PIRSF001338 1 160 8.4E-69 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 JV59_39045 18a61c0cc26c62f60e3df670652ed25e 161 SUPERFAMILY SSF52255 2 158 1.83E-66 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 JV59_26010 32fa42e60dbf8fc699de9ed06679d0f9 122 Gene3D G3DSA:1.20.5.710 2 51 8.5E-23 T 14-10-2018 JV59_26010 32fa42e60dbf8fc699de9ed06679d0f9 122 SUPERFAMILY SSF48300 4 58 2.75E-15 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26010 32fa42e60dbf8fc699de9ed06679d0f9 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 4.2E-47 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26010 32fa42e60dbf8fc699de9ed06679d0f9 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 3.4E-30 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26010 32fa42e60dbf8fc699de9ed06679d0f9 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 24.733 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26010 32fa42e60dbf8fc699de9ed06679d0f9 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 4.6E-16 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26010 32fa42e60dbf8fc699de9ed06679d0f9 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 100 3.0E-17 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26010 32fa42e60dbf8fc699de9ed06679d0f9 122 SUPERFAMILY SSF54736 52 122 2.79E-24 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like JV59_26010 32fa42e60dbf8fc699de9ed06679d0f9 122 Gene3D G3DSA:3.30.1390.10 52 122 1.0E-30 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like JV59_17675 44a1ca7c8d628e8e7fae765fa0fb5797 744 SUPERFAMILY SSF46626 52 258 7.77E-21 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_17675 44a1ca7c8d628e8e7fae765fa0fb5797 744 Gene3D G3DSA:1.10.760.10 263 483 1.9E-23 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_17675 44a1ca7c8d628e8e7fae765fa0fb5797 744 Pfam PF03150 Di-haem cytochrome c peroxidase 56 273 4.2E-29 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 JV59_17675 44a1ca7c8d628e8e7fae765fa0fb5797 744 SUPERFAMILY SSF46626 265 471 1.09E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_17675 44a1ca7c8d628e8e7fae765fa0fb5797 744 Gene3D G3DSA:2.60.120.380 516 616 3.0E-5 T 14-10-2018 JV59_17675 44a1ca7c8d628e8e7fae765fa0fb5797 744 Gene3D G3DSA:2.60.120.380 646 739 2.8E-10 T 14-10-2018 JV59_17675 44a1ca7c8d628e8e7fae765fa0fb5797 744 Gene3D G3DSA:1.10.760.10 51 262 5.5E-19 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_02605 39a7c32ce5514b7f2bc448dc7beb0775 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 40.823 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 JV59_02605 39a7c32ce5514b7f2bc448dc7beb0775 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 3.3E-26 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 JV59_02605 39a7c32ce5514b7f2bc448dc7beb0775 571 Gene3D G3DSA:3.40.50.800 4 554 1.4E-233 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily JV59_02605 39a7c32ce5514b7f2bc448dc7beb0775 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 5.3E-39 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_02605 39a7c32ce5514b7f2bc448dc7beb0775 571 PIRSF PIRSF001535 1 571 1.8E-264 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 JV59_02605 39a7c32ce5514b7f2bc448dc7beb0775 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 1.3E-244 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 JV59_02605 39a7c32ce5514b7f2bc448dc7beb0775 571 SUPERFAMILY SSF52954 463 570 6.95E-34 T 14-10-2018 JV59_02605 39a7c32ce5514b7f2bc448dc7beb0775 571 Gene3D G3DSA:3.90.960.10 240 389 1.4E-233 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 JV59_02605 39a7c32ce5514b7f2bc448dc7beb0775 571 SUPERFAMILY SSF55826 218 390 5.36E-31 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 JV59_02605 39a7c32ce5514b7f2bc448dc7beb0775 571 Pfam PF03129 Anticodon binding domain 475 568 2.5E-22 T 14-10-2018 IPR004154 Anticodon-binding JV59_02605 39a7c32ce5514b7f2bc448dc7beb0775 571 SUPERFAMILY SSF55681 10 478 5.87E-98 T 14-10-2018 JV59_02605 39a7c32ce5514b7f2bc448dc7beb0775 571 Gene3D G3DSA:3.30.930.10 11 465 1.4E-233 T 14-10-2018 JV59_02605 39a7c32ce5514b7f2bc448dc7beb0775 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.4E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 JV59_02605 39a7c32ce5514b7f2bc448dc7beb0775 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.4E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 JV59_02605 39a7c32ce5514b7f2bc448dc7beb0775 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.4E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 JV59_02605 39a7c32ce5514b7f2bc448dc7beb0775 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.4E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 JV59_23645 7b55a2ae65dac3483ba551f2902a75d3 1007 SUPERFAMILY SSF82866 778 1002 6.93E-46 T 14-10-2018 JV59_23645 7b55a2ae65dac3483ba551f2902a75d3 1007 Pfam PF00873 AcrB/AcrD/AcrF family 5 997 2.1E-173 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_23645 7b55a2ae65dac3483ba551f2902a75d3 1007 Gene3D G3DSA:3.30.70.1430 553 641 6.3E-251 T 14-10-2018 JV59_23645 7b55a2ae65dac3483ba551f2902a75d3 1007 Gene3D G3DSA:3.30.2090.10 693 780 6.3E-251 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_23645 7b55a2ae65dac3483ba551f2902a75d3 1007 Gene3D G3DSA:3.30.70.1320 136 329 6.3E-251 T 14-10-2018 JV59_23645 7b55a2ae65dac3483ba551f2902a75d3 1007 Gene3D G3DSA:3.30.2090.10 181 272 6.3E-251 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_23645 7b55a2ae65dac3483ba551f2902a75d3 1007 Gene3D G3DSA:1.20.1640.10 502 995 6.3E-251 T 14-10-2018 JV59_23645 7b55a2ae65dac3483ba551f2902a75d3 1007 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 9.7E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_23645 7b55a2ae65dac3483ba551f2902a75d3 1007 PRINTS PR00702 Acriflavin resistance protein family signature 359 380 9.7E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_23645 7b55a2ae65dac3483ba551f2902a75d3 1007 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 9.7E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_23645 7b55a2ae65dac3483ba551f2902a75d3 1007 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 9.7E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_23645 7b55a2ae65dac3483ba551f2902a75d3 1007 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 9.7E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_23645 7b55a2ae65dac3483ba551f2902a75d3 1007 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 9.7E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_23645 7b55a2ae65dac3483ba551f2902a75d3 1007 Gene3D G3DSA:3.30.70.1440 642 838 6.3E-251 T 14-10-2018 JV59_23645 7b55a2ae65dac3483ba551f2902a75d3 1007 SUPERFAMILY SSF82714 694 776 3.14E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_23645 7b55a2ae65dac3483ba551f2902a75d3 1007 SUPERFAMILY SSF82693 41 130 9.42E-17 T 14-10-2018 JV59_23645 7b55a2ae65dac3483ba551f2902a75d3 1007 SUPERFAMILY SSF82693 144 314 2.46E-9 T 14-10-2018 JV59_23645 7b55a2ae65dac3483ba551f2902a75d3 1007 Gene3D G3DSA:1.20.1640.10 11 501 6.3E-251 T 14-10-2018 JV59_23645 7b55a2ae65dac3483ba551f2902a75d3 1007 SUPERFAMILY SSF82866 294 489 1.57E-34 T 14-10-2018 JV59_23645 7b55a2ae65dac3483ba551f2902a75d3 1007 SUPERFAMILY SSF82714 186 268 2.88E-14 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_23645 7b55a2ae65dac3483ba551f2902a75d3 1007 Gene3D G3DSA:3.30.70.1430 41 788 6.3E-251 T 14-10-2018 JV59_16915 a9f22ae0e2e4ac9cb105996751bc369b 389 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 72 90 9.9E-11 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 JV59_16915 a9f22ae0e2e4ac9cb105996751bc369b 389 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 31 47 9.9E-11 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 JV59_16915 a9f22ae0e2e4ac9cb105996751bc369b 389 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 53 69 9.9E-11 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 JV59_16915 a9f22ae0e2e4ac9cb105996751bc369b 389 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 257 275 9.9E-11 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 JV59_16915 a9f22ae0e2e4ac9cb105996751bc369b 389 Gene3D G3DSA:3.40.50.2300 34 357 1.9E-88 T 14-10-2018 JV59_16915 a9f22ae0e2e4ac9cb105996751bc369b 389 Pfam PF13458 Periplasmic binding protein 31 367 6.5E-76 T 14-10-2018 IPR028081 Leucine-binding protein domain JV59_16915 a9f22ae0e2e4ac9cb105996751bc369b 389 Gene3D G3DSA:3.40.50.2300 146 372 1.9E-88 T 14-10-2018 JV59_16915 a9f22ae0e2e4ac9cb105996751bc369b 389 SUPERFAMILY SSF53822 31 372 1.61E-85 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_19430 97f7347a4aa27b4765310ca47e7ad38c 365 Gene3D G3DSA:3.40.50.2300 180 359 8.1E-146 T 14-10-2018 JV59_19430 97f7347a4aa27b4765310ca47e7ad38c 365 Pfam PF13407 Periplasmic binding protein domain 69 324 7.4E-17 T 14-10-2018 IPR025997 Periplasmic binding protein JV59_19430 97f7347a4aa27b4765310ca47e7ad38c 365 SUPERFAMILY SSF53822 27 364 2.06E-82 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_19430 97f7347a4aa27b4765310ca47e7ad38c 365 Gene3D G3DSA:3.40.50.2300 33 363 8.1E-146 T 14-10-2018 JV59_01955 8fae9f1d7863580c46cb80ff1090ee7e 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 1.1E-63 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_01955 8fae9f1d7863580c46cb80ff1090ee7e 142 Gene3D G3DSA:3.90.1180.10 1 142 4.4E-63 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 JV59_01955 8fae9f1d7863580c46cb80ff1090ee7e 142 Pfam PF00572 Ribosomal protein L13 15 138 4.8E-56 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 JV59_01955 8fae9f1d7863580c46cb80ff1090ee7e 142 SUPERFAMILY SSF52161 1 140 5.49E-60 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 JV59_01955 8fae9f1d7863580c46cb80ff1090ee7e 142 PIRSF PIRSF002181 1 142 1.8E-51 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 JV59_01955 8fae9f1d7863580c46cb80ff1090ee7e 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 14-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 JV59_01955 8fae9f1d7863580c46cb80ff1090ee7e 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.301 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 JV59_27920 2d16ddec5fed3e49788faa2884229100 138 SMART SM00116 13 61 0.15 T 14-10-2018 IPR000644 CBS domain JV59_27920 2d16ddec5fed3e49788faa2884229100 138 SMART SM00116 80 127 3.2E-8 T 14-10-2018 IPR000644 CBS domain JV59_27920 2d16ddec5fed3e49788faa2884229100 138 Gene3D G3DSA:3.10.580.10 1 132 3.0E-29 T 14-10-2018 JV59_27920 2d16ddec5fed3e49788faa2884229100 138 SUPERFAMILY SSF54631 3 135 2.65E-32 T 14-10-2018 JV59_27920 2d16ddec5fed3e49788faa2884229100 138 Pfam PF00571 CBS domain 73 127 1.7E-13 T 14-10-2018 IPR000644 CBS domain JV59_27920 2d16ddec5fed3e49788faa2884229100 138 Pfam PF00571 CBS domain 6 61 6.2E-7 T 14-10-2018 IPR000644 CBS domain JV59_38155 efedd7c7afab0f633fc2ebb776fadfc7 391 Gene3D G3DSA:1.20.1250.20 5 184 2.3E-16 T 14-10-2018 JV59_38155 efedd7c7afab0f633fc2ebb776fadfc7 391 SUPERFAMILY SSF103473 9 375 9.68E-39 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_38155 efedd7c7afab0f633fc2ebb776fadfc7 391 Pfam PF12832 MFS_1 like family 13 361 3.9E-42 T 14-10-2018 IPR024989 Major facilitator superfamily associated domain JV59_38155 efedd7c7afab0f633fc2ebb776fadfc7 391 PIRSF PIRSF004925 1 385 1.7E-105 T 14-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter JV59_38155 efedd7c7afab0f633fc2ebb776fadfc7 391 Gene3D G3DSA:1.20.1250.20 195 384 1.9E-34 T 14-10-2018 JV59_39280 182a4fcd77738c79c1465fa970b4ff90 144 Gene3D G3DSA:3.40.50.360 1 144 1.4E-44 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_39280 182a4fcd77738c79c1465fa970b4ff90 144 SUPERFAMILY SSF52218 3 144 1.6E-39 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_39280 182a4fcd77738c79c1465fa970b4ff90 144 Pfam PF00258 Flavodoxin 4 136 3.8E-23 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 JV59_19150 0647b3e7f420798cad90fc2c70607c11 262 Gene3D G3DSA:3.30.2010.10 47 138 3.5E-7 T 14-10-2018 JV59_19150 0647b3e7f420798cad90fc2c70607c11 262 Pfam PF01435 Peptidase family M48 61 246 1.9E-44 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 JV59_21375 2f98a6558c8d7ab174e70f9a00c68409 779 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 357 368 3.2E-26 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 JV59_21375 2f98a6558c8d7ab174e70f9a00c68409 779 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 419 435 3.2E-26 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 JV59_21375 2f98a6558c8d7ab174e70f9a00c68409 779 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 302 322 3.2E-26 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 JV59_21375 2f98a6558c8d7ab174e70f9a00c68409 779 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 336 352 3.2E-26 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 JV59_21375 2f98a6558c8d7ab174e70f9a00c68409 779 SUPERFAMILY SSF49299 611 692 1.83E-20 T 14-10-2018 IPR035986 PKD domain superfamily JV59_21375 2f98a6558c8d7ab174e70f9a00c68409 779 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 348 492 7.9E-36 T 14-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 JV59_21375 2f98a6558c8d7ab174e70f9a00c68409 779 Pfam PF00801 PKD domain 619 683 1.7E-16 T 14-10-2018 IPR000601 PKD domain JV59_21375 2f98a6558c8d7ab174e70f9a00c68409 779 Gene3D G3DSA:1.10.390.10 350 496 3.6E-50 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily JV59_21375 2f98a6558c8d7ab174e70f9a00c68409 779 SUPERFAMILY SSF55486 200 492 9.16E-85 T 14-10-2018 JV59_21375 2f98a6558c8d7ab174e70f9a00c68409 779 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 207 345 2.4E-38 T 14-10-2018 IPR013856 Peptidase M4 domain GO:0004222 JV59_21375 2f98a6558c8d7ab174e70f9a00c68409 779 Gene3D G3DSA:3.10.450.40 112 195 1.3E-18 T 14-10-2018 JV59_21375 2f98a6558c8d7ab174e70f9a00c68409 779 Gene3D G3DSA:3.10.170.10 198 349 4.4E-65 T 14-10-2018 JV59_21375 2f98a6558c8d7ab174e70f9a00c68409 779 SMART SM00089 613 693 3.1E-17 T 14-10-2018 IPR022409 PKD/Chitinase domain JV59_21375 2f98a6558c8d7ab174e70f9a00c68409 779 Gene3D G3DSA:2.60.40.10 608 693 8.6E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_21375 2f98a6558c8d7ab174e70f9a00c68409 779 Gene3D G3DSA:2.60.120.380 507 605 1.8E-18 T 14-10-2018 JV59_23570 749d7d1dc1adcac43cb26eccaeb14cbd 229 SUPERFAMILY SSF52833 1 100 1.69E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_23570 749d7d1dc1adcac43cb26eccaeb14cbd 229 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 76 2.0E-20 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 JV59_23570 749d7d1dc1adcac43cb26eccaeb14cbd 229 Gene3D G3DSA:1.20.1050.10 90 206 4.0E-14 T 14-10-2018 JV59_23570 749d7d1dc1adcac43cb26eccaeb14cbd 229 SUPERFAMILY SSF47616 85 195 8.35E-19 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily JV59_23570 749d7d1dc1adcac43cb26eccaeb14cbd 229 Gene3D G3DSA:3.40.30.10 1 89 7.0E-29 T 14-10-2018 JV59_23570 749d7d1dc1adcac43cb26eccaeb14cbd 229 Pfam PF00043 Glutathione S-transferase, C-terminal domain 107 184 4.0E-7 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal JV59_21460 4f545b6af7b718e586ac028aa5e7ff12 509 Pfam PF01590 GAF domain 29 159 4.8E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 JV59_21460 4f545b6af7b718e586ac028aa5e7ff12 509 Gene3D G3DSA:1.10.8.60 365 440 2.4E-16 T 14-10-2018 JV59_21460 4f545b6af7b718e586ac028aa5e7ff12 509 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JV59_21460 4f545b6af7b718e586ac028aa5e7ff12 509 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JV59_21460 4f545b6af7b718e586ac028aa5e7ff12 509 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 407 416 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site JV59_21460 4f545b6af7b718e586ac028aa5e7ff12 509 Gene3D G3DSA:3.40.50.300 180 364 1.0E-62 T 14-10-2018 JV59_21460 4f545b6af7b718e586ac028aa5e7ff12 509 Gene3D G3DSA:3.30.450.40 3 176 2.9E-16 T 14-10-2018 IPR029016 GAF-like domain superfamily JV59_21460 4f545b6af7b718e586ac028aa5e7ff12 509 SUPERFAMILY SSF46689 460 507 3.32E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_21460 4f545b6af7b718e586ac028aa5e7ff12 509 SMART SM00382 214 361 2.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_21460 4f545b6af7b718e586ac028aa5e7ff12 509 SUPERFAMILY SSF52540 193 432 2.58E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_21460 4f545b6af7b718e586ac028aa5e7ff12 509 Gene3D G3DSA:1.10.10.60 455 509 3.2E-8 T 14-10-2018 JV59_21460 4f545b6af7b718e586ac028aa5e7ff12 509 Pfam PF00158 Sigma-54 interaction domain 195 360 5.9E-68 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JV59_21460 4f545b6af7b718e586ac028aa5e7ff12 509 SUPERFAMILY SSF55781 4 163 1.2E-17 T 14-10-2018 JV59_21460 4f545b6af7b718e586ac028aa5e7ff12 509 SMART SM00065 21 170 3.7E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 JV59_24435 0f8fec522234edb8752a11d9165b832c 228 SUPERFAMILY SSF52317 32 222 4.25E-39 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_24435 0f8fec522234edb8752a11d9165b832c 228 Gene3D G3DSA:3.40.50.880 22 227 1.2E-46 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_24435 0f8fec522234edb8752a11d9165b832c 228 Pfam PF01965 DJ-1/PfpI family 33 202 8.1E-18 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 JV59_36100 e0d4748802d6c3fe50677781639da855 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 38.839 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 JV59_36100 e0d4748802d6c3fe50677781639da855 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 1.1E-124 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 JV59_29775 616c999fe0f1de3656d0f2b5de249189 243 Pfam PF00881 Nitroreductase family 73 242 1.8E-17 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 JV59_29775 616c999fe0f1de3656d0f2b5de249189 243 SUPERFAMILY SSF55469 67 242 1.35E-12 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JV59_29775 616c999fe0f1de3656d0f2b5de249189 243 Gene3D G3DSA:3.40.109.10 18 243 8.4E-42 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JV59_29775 616c999fe0f1de3656d0f2b5de249189 243 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 97 242 1.0E-24 T 14-10-2018 IPR020051 SagB-type dehydrogenase domain JV59_17460 e04d44012beda920df5c16e69f5a05fc 478 SMART SM00846 127 288 2.7E-51 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_17460 e04d44012beda920df5c16e69f5a05fc 478 Gene3D G3DSA:3.30.360.10 287 452 4.8E-113 T 14-10-2018 JV59_17460 e04d44012beda920df5c16e69f5a05fc 478 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 128 238 7.1E-22 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_17460 e04d44012beda920df5c16e69f5a05fc 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 365 382 2.0E-17 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_17460 e04d44012beda920df5c16e69f5a05fc 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 300 2.0E-17 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_17460 e04d44012beda920df5c16e69f5a05fc 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 246 259 2.0E-17 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_17460 e04d44012beda920df5c16e69f5a05fc 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 309 325 2.0E-17 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_17460 e04d44012beda920df5c16e69f5a05fc 478 Gene3D G3DSA:3.40.50.720 129 462 4.8E-113 T 14-10-2018 JV59_17460 e04d44012beda920df5c16e69f5a05fc 478 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 293 450 8.3E-44 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_17460 e04d44012beda920df5c16e69f5a05fc 478 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 286 293 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_17460 e04d44012beda920df5c16e69f5a05fc 478 SUPERFAMILY SSF55347 288 451 5.61E-52 T 14-10-2018 JV59_17460 e04d44012beda920df5c16e69f5a05fc 478 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 129 462 4.0E-112 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_17460 e04d44012beda920df5c16e69f5a05fc 478 SUPERFAMILY SSF51735 128 304 4.29E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_17740 4f9e76412784369d80483014db0d59b1 143 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 87 101 5.0E-4 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat JV59_17740 4f9e76412784369d80483014db0d59b1 143 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 65 125 2.5E-20 T 14-10-2018 IPR005046 Protein of unknown function DUF285 JV59_38255 5fd677913b33272b723706bbf485d03f 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 112 6.9E-38 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 JV59_38255 5fd677913b33272b723706bbf485d03f 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 JV59_38255 5fd677913b33272b723706bbf485d03f 273 PIRSF PIRSF000441 7 81 160.0 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 JV59_38255 5fd677913b33272b723706bbf485d03f 273 PIRSF PIRSF000441 75 266 4.1E-56 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 JV59_38255 5fd677913b33272b723706bbf485d03f 273 SUPERFAMILY SSF51161 8 260 4.85E-63 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JV59_38255 5fd677913b33272b723706bbf485d03f 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 3.8E-74 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 JV59_38255 5fd677913b33272b723706bbf485d03f 273 SMART SM00971 9 113 6.1E-58 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 JV59_38255 5fd677913b33272b723706bbf485d03f 273 Gene3D G3DSA:2.160.10.10 143 269 4.1E-37 T 14-10-2018 JV59_38255 5fd677913b33272b723706bbf485d03f 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 3.6E-9 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_38255 5fd677913b33272b723706bbf485d03f 273 Gene3D G3DSA:1.10.3130.10 1 142 1.8E-51 T 14-10-2018 JV59_32045 12fd54f467d8c865c51d56c9707df41b 270 SUPERFAMILY SSF53474 38 262 5.8E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_32045 12fd54f467d8c865c51d56c9707df41b 270 Gene3D G3DSA:3.40.50.1820 29 261 3.6E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_32045 12fd54f467d8c865c51d56c9707df41b 270 Pfam PF00561 alpha/beta hydrolase fold 51 160 6.3E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_32045 12fd54f467d8c865c51d56c9707df41b 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 132 145 1.2E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_32045 12fd54f467d8c865c51d56c9707df41b 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 77 92 1.2E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_32045 12fd54f467d8c865c51d56c9707df41b 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 118 131 1.2E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_19295 80d47b10c3a0b7e5c81abba9c061999c 159 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 139 150 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JV59_19295 80d47b10c3a0b7e5c81abba9c061999c 159 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 23 158 23.943 T 14-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 JV59_19295 80d47b10c3a0b7e5c81abba9c061999c 159 Pfam PF00037 4Fe-4S binding domain 133 154 1.9E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JV59_19295 80d47b10c3a0b7e5c81abba9c061999c 159 SUPERFAMILY SSF54862 30 156 3.35E-20 T 14-10-2018 JV59_19295 80d47b10c3a0b7e5c81abba9c061999c 159 Gene3D G3DSA:3.30.70.20 94 159 2.4E-9 T 14-10-2018 JV59_19295 80d47b10c3a0b7e5c81abba9c061999c 159 Gene3D G3DSA:3.30.70.20 30 81 1.2E-10 T 14-10-2018 JV59_19295 80d47b10c3a0b7e5c81abba9c061999c 159 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 67 78 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JV59_19295 80d47b10c3a0b7e5c81abba9c061999c 159 Pfam PF12838 4Fe-4S dicluster domain 34 78 6.0E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JV59_19295 80d47b10c3a0b7e5c81abba9c061999c 159 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 8 154 4.8E-44 T 14-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 JV59_26765 45ef1188e3389f01e9f6f3da314df35b 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 3.8E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JV59_26765 45ef1188e3389f01e9f6f3da314df35b 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 3.8E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JV59_26765 45ef1188e3389f01e9f6f3da314df35b 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 3.8E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JV59_26765 45ef1188e3389f01e9f6f3da314df35b 181 SUPERFAMILY SSF50891 18 180 1.1E-54 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily JV59_26765 45ef1188e3389f01e9f6f3da314df35b 181 Gene3D G3DSA:2.40.100.10 18 181 4.5E-60 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily JV59_26765 45ef1188e3389f01e9f6f3da314df35b 181 PIRSF PIRSF001467 5 178 3.9E-25 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 JV59_26765 45ef1188e3389f01e9f6f3da314df35b 181 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 177 7.9E-44 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JV59_26765 45ef1188e3389f01e9f6f3da314df35b 181 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 JV59_28015 6ec745c2a8b032997f9659fd0a21b7fb 220 Gene3D G3DSA:3.40.50.720 1 212 5.9E-23 T 14-10-2018 JV59_28015 6ec745c2a8b032997f9659fd0a21b7fb 220 SUPERFAMILY SSF51735 1 192 1.42E-22 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_28015 6ec745c2a8b032997f9659fd0a21b7fb 220 Pfam PF00106 short chain dehydrogenase 7 186 5.4E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_28015 6ec745c2a8b032997f9659fd0a21b7fb 220 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 5.1E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_28015 6ec745c2a8b032997f9659fd0a21b7fb 220 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 5.1E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_28015 6ec745c2a8b032997f9659fd0a21b7fb 220 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.1E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_28015 6ec745c2a8b032997f9659fd0a21b7fb 220 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 5.1E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_39340 571f71ec63cd6790d4e340ac3ddeb037 467 SUPERFAMILY SSF47917 352 466 6.8E-51 T 14-10-2018 JV59_39340 571f71ec63cd6790d4e340ac3ddeb037 467 SUPERFAMILY SSF50615 1 75 2.17E-25 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_39340 571f71ec63cd6790d4e340ac3ddeb037 467 Gene3D G3DSA:3.40.50.300 76 351 1.0E-110 T 14-10-2018 JV59_39340 571f71ec63cd6790d4e340ac3ddeb037 467 Gene3D G3DSA:2.40.10.170 2 75 5.5E-30 T 14-10-2018 JV59_39340 571f71ec63cd6790d4e340ac3ddeb037 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 1.2E-20 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_39340 571f71ec63cd6790d4e340ac3ddeb037 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 7.8E-249 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 JV59_39340 571f71ec63cd6790d4e340ac3ddeb037 467 Gene3D G3DSA:1.10.1140.10 352 467 4.1E-53 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_39340 571f71ec63cd6790d4e340ac3ddeb037 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_39340 571f71ec63cd6790d4e340ac3ddeb037 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 55.921 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 JV59_39340 571f71ec63cd6790d4e340ac3ddeb037 467 SUPERFAMILY SSF52540 77 355 6.01E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_39340 571f71ec63cd6790d4e340ac3ddeb037 467 SMART SM00382 142 334 6.4E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_39340 571f71ec63cd6790d4e340ac3ddeb037 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 4.2E-60 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_02975 903566c87f19d7723641e0a53343b8d2 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.5E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JV59_02975 903566c87f19d7723641e0a53343b8d2 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 1.5E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JV59_02975 903566c87f19d7723641e0a53343b8d2 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.5E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JV59_02975 903566c87f19d7723641e0a53343b8d2 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.5E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JV59_02975 903566c87f19d7723641e0a53343b8d2 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 1.5E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JV59_02975 903566c87f19d7723641e0a53343b8d2 475 Gene3D G3DSA:3.40.50.620 2 317 4.6E-133 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_02975 903566c87f19d7723641e0a53343b8d2 475 Gene3D G3DSA:1.10.10.350 369 474 1.2E-23 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 JV59_02975 903566c87f19d7723641e0a53343b8d2 475 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 465 32.114 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 JV59_02975 903566c87f19d7723641e0a53343b8d2 475 SUPERFAMILY SSF52374 3 301 5.36E-108 T 14-10-2018 JV59_02975 903566c87f19d7723641e0a53343b8d2 475 SUPERFAMILY SSF48163 302 465 7.46E-45 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 JV59_02975 903566c87f19d7723641e0a53343b8d2 475 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_02975 903566c87f19d7723641e0a53343b8d2 475 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 8.3E-113 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 JV59_02975 903566c87f19d7723641e0a53343b8d2 475 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 466 1.5E-192 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 JV59_38200 02d92c4a8519d8ae9c304e23c319ab80 328 Pfam PF00990 Diguanylate cyclase, GGDEF domain 147 303 7.5E-47 T 14-10-2018 IPR000160 GGDEF domain JV59_38200 02d92c4a8519d8ae9c304e23c319ab80 328 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 142 306 1.0E-54 T 14-10-2018 IPR000160 GGDEF domain JV59_38200 02d92c4a8519d8ae9c304e23c319ab80 328 Gene3D G3DSA:3.30.450.20 3 143 2.1E-8 T 14-10-2018 JV59_38200 02d92c4a8519d8ae9c304e23c319ab80 328 SUPERFAMILY SSF55785 5 133 8.89E-5 T 14-10-2018 IPR035965 PAS domain superfamily JV59_38200 02d92c4a8519d8ae9c304e23c319ab80 328 SUPERFAMILY SSF55073 151 309 2.9E-51 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_38200 02d92c4a8519d8ae9c304e23c319ab80 328 Gene3D G3DSA:3.30.70.270 144 312 3.5E-60 T 14-10-2018 JV59_38200 02d92c4a8519d8ae9c304e23c319ab80 328 SMART SM00267 135 307 3.7E-58 T 14-10-2018 IPR000160 GGDEF domain JV59_31015 737cdf495f21c06dd3a568fd7a653077 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 62 112 8.3E-12 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_31015 737cdf495f21c06dd3a568fd7a653077 951 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 JV59_31015 737cdf495f21c06dd3a568fd7a653077 951 Pfam PF00384 Molybdopterin oxidoreductase 118 568 1.4E-53 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_31015 737cdf495f21c06dd3a568fd7a653077 951 SMART SM00926 61 115 1.8E-16 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_31015 737cdf495f21c06dd3a568fd7a653077 951 Gene3D G3DSA:3.40.228.10 195 394 2.2E-133 T 14-10-2018 JV59_31015 737cdf495f21c06dd3a568fd7a653077 951 Gene3D G3DSA:3.40.50.740 126 617 2.2E-133 T 14-10-2018 JV59_31015 737cdf495f21c06dd3a568fd7a653077 951 Pfam PF01568 Molydopterin dinucleotide binding domain 818 944 7.2E-21 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 JV59_31015 737cdf495f21c06dd3a568fd7a653077 951 Gene3D G3DSA:2.40.40.20 767 951 1.5E-48 T 14-10-2018 JV59_31015 737cdf495f21c06dd3a568fd7a653077 951 SUPERFAMILY SSF53706 60 646 3.14E-200 T 14-10-2018 JV59_31015 737cdf495f21c06dd3a568fd7a653077 951 Gene3D G3DSA:2.20.25.90 62 114 1.3E-12 T 14-10-2018 JV59_31015 737cdf495f21c06dd3a568fd7a653077 951 SUPERFAMILY SSF50692 799 951 2.49E-39 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily JV59_31015 737cdf495f21c06dd3a568fd7a653077 951 PIRSF PIRSF036643 640 692 230.0 T 14-10-2018 JV59_31015 737cdf495f21c06dd3a568fd7a653077 951 PIRSF PIRSF036643 790 951 1.9E-16 T 14-10-2018 JV59_31015 737cdf495f21c06dd3a568fd7a653077 951 PIRSF PIRSF036643 25 585 2.3E-113 T 14-10-2018 JV59_00005 1cb4728e4c0d813cd4781d2c932c6ddc 378 Pfam PF07687 Peptidase dimerisation domain 174 285 3.0E-25 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain JV59_00005 1cb4728e4c0d813cd4781d2c932c6ddc 378 SUPERFAMILY SSF55031 177 291 2.09E-22 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain JV59_00005 1cb4728e4c0d813cd4781d2c932c6ddc 378 Gene3D G3DSA:3.40.630.10 22 360 2.0E-78 T 14-10-2018 JV59_00005 1cb4728e4c0d813cd4781d2c932c6ddc 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 64.47 T 14-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 JV59_00005 1cb4728e4c0d813cd4781d2c932c6ddc 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 372 2.3E-127 T 14-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 JV59_00005 1cb4728e4c0d813cd4781d2c932c6ddc 378 Gene3D G3DSA:3.30.70.360 177 292 2.0E-78 T 14-10-2018 JV59_00005 1cb4728e4c0d813cd4781d2c932c6ddc 378 SUPERFAMILY SSF53187 4 377 1.57E-55 T 14-10-2018 JV59_00005 1cb4728e4c0d813cd4781d2c932c6ddc 378 Pfam PF01546 Peptidase family M20/M25/M40 72 373 4.2E-32 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 JV59_00005 1cb4728e4c0d813cd4781d2c932c6ddc 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 JV59_00005 1cb4728e4c0d813cd4781d2c932c6ddc 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 JV59_31890 b884746f8101c53391a6d56f4b0e5de6 100 Gene3D G3DSA:2.60.200.60 58 99 2.7E-12 T 14-10-2018 JV59_31890 b884746f8101c53391a6d56f4b0e5de6 100 Gene3D G3DSA:2.60.200.60 2 57 1.4E-9 T 14-10-2018 JV59_31890 b884746f8101c53391a6d56f4b0e5de6 100 Pfam PF05488 PAAR motif 25 90 2.6E-25 T 14-10-2018 IPR008727 PAAR motif JV59_30250 81d851ee85d3d90c37e232e4738fc369 965 Pfam PF00202 Aminotransferase class-III 56 469 1.2E-94 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JV59_30250 81d851ee85d3d90c37e232e4738fc369 965 Gene3D G3DSA:3.40.640.10 581 849 2.7E-137 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_30250 81d851ee85d3d90c37e232e4738fc369 965 Gene3D G3DSA:3.40.640.10 92 360 4.4E-131 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_30250 81d851ee85d3d90c37e232e4738fc369 965 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 785 806 - T 14-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 JV59_30250 81d851ee85d3d90c37e232e4738fc369 965 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 529 898 2.7E-63 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 JV59_30250 81d851ee85d3d90c37e232e4738fc369 965 Gene3D G3DSA:3.90.1150.10 44 467 4.4E-131 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_30250 81d851ee85d3d90c37e232e4738fc369 965 SUPERFAMILY SSF53383 45 469 6.39E-114 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_30250 81d851ee85d3d90c37e232e4738fc369 965 Gene3D G3DSA:3.90.1150.10 567 954 2.7E-137 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_30250 81d851ee85d3d90c37e232e4738fc369 965 Gene3D G3DSA:1.20.1650.10 468 566 1.1E-42 T 14-10-2018 JV59_30250 81d851ee85d3d90c37e232e4738fc369 965 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 39 469 8.3E-158 T 14-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 JV59_30250 81d851ee85d3d90c37e232e4738fc369 965 SUPERFAMILY SSF53383 504 964 1.51E-112 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_33910 f57108603b4f7bc1ead5b06a8deb83a9 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 14-10-2018 IPR019808 Histidine triad, conserved site JV59_33910 f57108603b4f7bc1ead5b06a8deb83a9 116 Pfam PF01230 HIT domain 12 109 3.8E-29 T 14-10-2018 IPR001310 Histidine triad (HIT) protein JV59_33910 f57108603b4f7bc1ead5b06a8deb83a9 116 PRINTS PR00332 Histidine triad family signature 6 22 1.2E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein JV59_33910 f57108603b4f7bc1ead5b06a8deb83a9 116 PRINTS PR00332 Histidine triad family signature 27 45 1.2E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein JV59_33910 f57108603b4f7bc1ead5b06a8deb83a9 116 PRINTS PR00332 Histidine triad family signature 95 105 1.2E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein JV59_33910 f57108603b4f7bc1ead5b06a8deb83a9 116 Gene3D G3DSA:3.30.428.10 1 111 2.8E-35 T 14-10-2018 IPR036265 HIT-like superfamily JV59_33910 f57108603b4f7bc1ead5b06a8deb83a9 116 SUPERFAMILY SSF54197 2 114 8.51E-35 T 14-10-2018 IPR036265 HIT-like superfamily JV59_22750 532bd5a8cd28237323b204ea4b12c426 198 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 19 198 3.7E-84 T 14-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 JV59_22750 532bd5a8cd28237323b204ea4b12c426 198 Gene3D G3DSA:1.20.120.80 13 198 1.2E-57 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_22750 532bd5a8cd28237323b204ea4b12c426 198 SUPERFAMILY SSF81452 8 196 5.49E-58 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_22750 532bd5a8cd28237323b204ea4b12c426 198 Pfam PF00510 Cytochrome c oxidase subunit III 10 196 1.8E-18 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_28615 133ccbcd10508d67d03adf54f282868b 139 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 11 127 1.1E-33 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 JV59_28615 133ccbcd10508d67d03adf54f282868b 139 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 8 131 1.3E-47 T 14-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 JV59_28615 133ccbcd10508d67d03adf54f282868b 139 SUPERFAMILY SSF54637 5 130 8.43E-38 T 14-10-2018 IPR029069 HotDog domain superfamily JV59_28615 133ccbcd10508d67d03adf54f282868b 139 PIRSF PIRSF003230 2 138 1.0E-44 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 JV59_28615 133ccbcd10508d67d03adf54f282868b 139 Gene3D G3DSA:3.10.129.10 3 137 4.3E-41 T 14-10-2018 JV59_28615 133ccbcd10508d67d03adf54f282868b 139 Pfam PF03061 Thioesterase superfamily 22 106 1.3E-17 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 JV59_19995 3f0024059d24f6153f6d6ccb6e22db45 205 SUPERFAMILY SSF53474 3 187 2.39E-16 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_19995 3f0024059d24f6153f6d6ccb6e22db45 205 Gene3D G3DSA:3.40.50.1820 3 203 1.8E-18 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_19995 3f0024059d24f6153f6d6ccb6e22db45 205 Pfam PF02450 Lecithin:cholesterol acyltransferase 44 99 9.9E-5 T 14-10-2018 IPR003386 Lecithin:cholesterol/phospholipid:diacylglycerol acyltransferase GO:0006629|GO:0008374 JV59_35390 c1341ce735cc77ced22389da0299c3bc 452 Gene3D G3DSA:3.30.1850.10 1 120 2.6E-56 T 14-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 JV59_35390 c1341ce735cc77ced22389da0299c3bc 452 Pfam PF03641 Possible lysine decarboxylase 187 326 3.4E-35 T 14-10-2018 IPR031100 LOG family JV59_35390 c1341ce735cc77ced22389da0299c3bc 452 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 7.0E-50 T 14-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 JV59_35390 c1341ce735cc77ced22389da0299c3bc 452 Gene3D G3DSA:3.40.50.450 121 450 2.2E-124 T 14-10-2018 JV59_35390 c1341ce735cc77ced22389da0299c3bc 452 Pfam PF11892 Domain of unknown function (DUF3412) 330 450 4.5E-57 T 14-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 JV59_35390 c1341ce735cc77ced22389da0299c3bc 452 SUPERFAMILY SSF102405 120 327 1.68E-43 T 14-10-2018 JV59_01285 fa7853f5f620b6a2dbb76afa571f7ed9 585 Pfam PF10410 DnaB-helicase binding domain of primase 375 430 2.4E-8 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 JV59_01285 fa7853f5f620b6a2dbb76afa571f7ed9 585 Gene3D G3DSA:1.10.860.10 443 585 4.5E-56 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal JV59_01285 fa7853f5f620b6a2dbb76afa571f7ed9 585 Gene3D G3DSA:3.90.580.10 1 102 8.0E-41 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 JV59_01285 fa7853f5f620b6a2dbb76afa571f7ed9 585 SMART SM00766 455 580 5.5E-54 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 JV59_01285 fa7853f5f620b6a2dbb76afa571f7ed9 585 PIRSF PIRSF002811 2 584 6.3E-144 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 JV59_01285 fa7853f5f620b6a2dbb76afa571f7ed9 585 Pfam PF08275 DNA primase catalytic core, N-terminal domain 132 257 1.1E-41 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal JV59_01285 fa7853f5f620b6a2dbb76afa571f7ed9 585 SUPERFAMILY SSF56731 122 430 1.24E-108 T 14-10-2018 JV59_01285 fa7853f5f620b6a2dbb76afa571f7ed9 585 Pfam PF08278 DNA primase DnaG DnaB-binding 456 579 2.0E-35 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 JV59_01285 fa7853f5f620b6a2dbb76afa571f7ed9 585 Hamap MF_00974 DNA primase [dnaG]. 4 581 29.241 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 JV59_01285 fa7853f5f620b6a2dbb76afa571f7ed9 585 Pfam PF13155 Toprim-like 269 356 1.6E-13 T 14-10-2018 JV59_01285 fa7853f5f620b6a2dbb76afa571f7ed9 585 Gene3D G3DSA:3.90.980.10 121 246 4.9E-44 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily JV59_01285 fa7853f5f620b6a2dbb76afa571f7ed9 585 Gene3D G3DSA:3.40.1360.10 247 373 1.5E-42 T 14-10-2018 JV59_01285 fa7853f5f620b6a2dbb76afa571f7ed9 585 TIGRFAM TIGR01391 dnaG: DNA primase 5 424 4.3E-148 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 JV59_01285 fa7853f5f620b6a2dbb76afa571f7ed9 585 Pfam PF01807 CHC2 zinc finger 6 101 2.3E-41 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 JV59_01285 fa7853f5f620b6a2dbb76afa571f7ed9 585 SMART SM00400 36 90 5.3E-36 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 JV59_01285 fa7853f5f620b6a2dbb76afa571f7ed9 585 SMART SM00493 265 336 2.9E-19 T 14-10-2018 IPR006171 TOPRIM domain JV59_01285 fa7853f5f620b6a2dbb76afa571f7ed9 585 Gene3D G3DSA:1.20.50.20 374 432 6.4E-9 T 14-10-2018 JV59_01285 fa7853f5f620b6a2dbb76afa571f7ed9 585 SUPERFAMILY SSF117023 452 583 8.76E-44 T 14-10-2018 JV59_01285 fa7853f5f620b6a2dbb76afa571f7ed9 585 SUPERFAMILY SSF57783 4 101 1.21E-38 T 14-10-2018 JV59_01300 ab056ffb5751a0921c5c6b493c363854 338 SUPERFAMILY SSF53067 3 123 1.04E-30 T 14-10-2018 JV59_01300 ab056ffb5751a0921c5c6b493c363854 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 3.7E-50 T 14-10-2018 IPR017861 Kae1/TsaD family JV59_01300 ab056ffb5751a0921c5c6b493c363854 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 3.7E-50 T 14-10-2018 IPR017861 Kae1/TsaD family JV59_01300 ab056ffb5751a0921c5c6b493c363854 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 3.7E-50 T 14-10-2018 IPR017861 Kae1/TsaD family JV59_01300 ab056ffb5751a0921c5c6b493c363854 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 3.7E-50 T 14-10-2018 IPR017861 Kae1/TsaD family JV59_01300 ab056ffb5751a0921c5c6b493c363854 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 3.7E-50 T 14-10-2018 IPR017861 Kae1/TsaD family JV59_01300 ab056ffb5751a0921c5c6b493c363854 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 3.7E-50 T 14-10-2018 IPR017861 Kae1/TsaD family JV59_01300 ab056ffb5751a0921c5c6b493c363854 338 SUPERFAMILY SSF53067 101 309 1.38E-43 T 14-10-2018 JV59_01300 ab056ffb5751a0921c5c6b493c363854 338 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 2.4E-133 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 JV59_01300 ab056ffb5751a0921c5c6b493c363854 338 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 63.029 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 JV59_01300 ab056ffb5751a0921c5c6b493c363854 338 Gene3D G3DSA:3.30.420.40 129 293 4.1E-130 T 14-10-2018 JV59_01300 ab056ffb5751a0921c5c6b493c363854 338 Gene3D G3DSA:3.30.420.40 3 315 4.1E-130 T 14-10-2018 JV59_01300 ab056ffb5751a0921c5c6b493c363854 338 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 14-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 JV59_01300 ab056ffb5751a0921c5c6b493c363854 338 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 306 1.8E-122 T 14-10-2018 IPR017861 Kae1/TsaD family JV59_01300 ab056ffb5751a0921c5c6b493c363854 338 Pfam PF00814 Glycoprotease family 24 307 3.6E-102 T 14-10-2018 IPR000905 Gcp-like domain JV59_36295 9143cd2ceff3581e07b56fc7c53cc2df 450 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 14-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 JV59_36295 9143cd2ceff3581e07b56fc7c53cc2df 450 SUPERFAMILY SSF51735 4 170 5.47E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_36295 9143cd2ceff3581e07b56fc7c53cc2df 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 1.5E-40 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 JV59_36295 9143cd2ceff3581e07b56fc7c53cc2df 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 74 90 1.5E-40 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 JV59_36295 9143cd2ceff3581e07b56fc7c53cc2df 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 1.5E-40 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 JV59_36295 9143cd2ceff3581e07b56fc7c53cc2df 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 1.5E-40 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 JV59_36295 9143cd2ceff3581e07b56fc7c53cc2df 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 1.5E-40 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 JV59_36295 9143cd2ceff3581e07b56fc7c53cc2df 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 96 109 1.5E-40 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 JV59_36295 9143cd2ceff3581e07b56fc7c53cc2df 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 1.5E-40 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 JV59_36295 9143cd2ceff3581e07b56fc7c53cc2df 450 Pfam PF02056 Family 4 glycosyl hydrolase 5 187 2.3E-76 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 JV59_36295 9143cd2ceff3581e07b56fc7c53cc2df 450 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 420 4.1E-63 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 JV59_36295 9143cd2ceff3581e07b56fc7c53cc2df 450 SUPERFAMILY SSF56327 173 447 1.19E-73 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 JV59_36295 9143cd2ceff3581e07b56fc7c53cc2df 450 Gene3D G3DSA:3.90.1820.20 1 443 3.8E-139 T 14-10-2018 JV59_17265 4a61d2c3f108d78ec1fab9dcd8520672 822 ProSitePatterns PS01095 Chitinases family 18 active site. 158 166 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 JV59_17265 4a61d2c3f108d78ec1fab9dcd8520672 822 Pfam PF16403 Domain of unknown function (DUF5011) 370 439 3.7E-16 T 14-10-2018 IPR032179 Domain of unknown function DUF5011 JV59_17265 4a61d2c3f108d78ec1fab9dcd8520672 822 Pfam PF16403 Domain of unknown function (DUF5011) 451 522 5.4E-14 T 14-10-2018 IPR032179 Domain of unknown function DUF5011 JV59_17265 4a61d2c3f108d78ec1fab9dcd8520672 822 Pfam PF16403 Domain of unknown function (DUF5011) 529 599 6.0E-15 T 14-10-2018 IPR032179 Domain of unknown function DUF5011 JV59_17265 4a61d2c3f108d78ec1fab9dcd8520672 822 Pfam PF14600 Cellulose-binding domain 606 662 4.6E-25 T 14-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 JV59_17265 4a61d2c3f108d78ec1fab9dcd8520672 822 Gene3D G3DSA:2.10.10.20 602 662 2.3E-15 T 14-10-2018 JV59_17265 4a61d2c3f108d78ec1fab9dcd8520672 822 Gene3D G3DSA:2.60.40.10 663 754 1.9E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_17265 4a61d2c3f108d78ec1fab9dcd8520672 822 SUPERFAMILY SSF51445 43 340 1.51E-47 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_17265 4a61d2c3f108d78ec1fab9dcd8520672 822 SMART SM00495 771 818 1.0 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_17265 4a61d2c3f108d78ec1fab9dcd8520672 822 SMART SM00495 615 658 1.0 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_17265 4a61d2c3f108d78ec1fab9dcd8520672 822 Gene3D G3DSA:3.20.20.80 38 363 1.2E-75 T 14-10-2018 JV59_17265 4a61d2c3f108d78ec1fab9dcd8520672 822 SUPERFAMILY SSF49299 667 755 2.75E-6 T 14-10-2018 IPR035986 PKD domain superfamily JV59_17265 4a61d2c3f108d78ec1fab9dcd8520672 822 SUPERFAMILY SSF51055 606 655 2.09E-10 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_17265 4a61d2c3f108d78ec1fab9dcd8520672 822 Pfam PF00704 Glycosyl hydrolases family 18 45 336 1.7E-26 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 JV59_17265 4a61d2c3f108d78ec1fab9dcd8520672 822 Gene3D G3DSA:2.60.40.10 524 599 6.1E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_17265 4a61d2c3f108d78ec1fab9dcd8520672 822 Gene3D G3DSA:2.60.40.10 364 443 2.5E-24 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_17265 4a61d2c3f108d78ec1fab9dcd8520672 822 Gene3D G3DSA:2.60.40.10 447 523 3.4E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_20745 022aa25f5df3418883dad7a3adf54da5 219 SUPERFAMILY SSF56784 2 212 1.03E-28 T 14-10-2018 IPR036412 HAD-like superfamily JV59_20745 022aa25f5df3418883dad7a3adf54da5 219 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 189 5.8E-31 T 14-10-2018 JV59_20745 022aa25f5df3418883dad7a3adf54da5 219 Gene3D G3DSA:1.20.1440.100 17 90 2.5E-59 T 14-10-2018 JV59_20745 022aa25f5df3418883dad7a3adf54da5 219 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 192 5.6E-28 T 14-10-2018 JV59_20745 022aa25f5df3418883dad7a3adf54da5 219 Gene3D G3DSA:3.40.50.1000 6 216 2.5E-59 T 14-10-2018 IPR023214 HAD superfamily JV59_20745 022aa25f5df3418883dad7a3adf54da5 219 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 204 3.0E-53 T 14-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like JV59_24820 cfc029eeadf100cf0aa5de00afd11658 347 Gene3D G3DSA:1.10.3470.10 19 347 9.0E-94 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JV59_24820 cfc029eeadf100cf0aa5de00afd11658 347 SUPERFAMILY SSF81345 17 344 6.41E-78 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JV59_24820 cfc029eeadf100cf0aa5de00afd11658 347 Pfam PF01032 FecCD transport family 33 344 1.2E-81 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 JV59_16505 7ccff1301615a083f4950304e5066831 388 SUPERFAMILY SSF48208 74 363 7.48E-17 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 JV59_16505 7ccff1301615a083f4950304e5066831 388 Gene3D G3DSA:1.50.10.10 74 280 5.7E-6 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 JV59_02100 bd3db8f5cc8257b0e7bf06647edea938 379 Pfam PF00117 Glutamine amidotransferase class-I 197 372 9.2E-47 T 14-10-2018 IPR017926 Glutamine amidotransferase JV59_02100 bd3db8f5cc8257b0e7bf06647edea938 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.2E-5 T 14-10-2018 JV59_02100 bd3db8f5cc8257b0e7bf06647edea938 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.2E-5 T 14-10-2018 JV59_02100 bd3db8f5cc8257b0e7bf06647edea938 379 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.2E-5 T 14-10-2018 JV59_02100 bd3db8f5cc8257b0e7bf06647edea938 379 Gene3D G3DSA:3.50.30.20 2 151 3.5E-63 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JV59_02100 bd3db8f5cc8257b0e7bf06647edea938 379 SMART SM01097 3 133 2.9E-94 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JV59_02100 bd3db8f5cc8257b0e7bf06647edea938 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 1.4E-150 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JV59_02100 bd3db8f5cc8257b0e7bf06647edea938 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.9E-11 T 14-10-2018 JV59_02100 bd3db8f5cc8257b0e7bf06647edea938 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.9E-11 T 14-10-2018 JV59_02100 bd3db8f5cc8257b0e7bf06647edea938 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.9E-11 T 14-10-2018 JV59_02100 bd3db8f5cc8257b0e7bf06647edea938 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 1.2E-53 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JV59_02100 bd3db8f5cc8257b0e7bf06647edea938 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.894 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JV59_02100 bd3db8f5cc8257b0e7bf06647edea938 379 SUPERFAMILY SSF52317 153 377 2.14E-62 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_02100 bd3db8f5cc8257b0e7bf06647edea938 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 1.4E-39 T 14-10-2018 JV59_02100 bd3db8f5cc8257b0e7bf06647edea938 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 1.4E-39 T 14-10-2018 JV59_02100 bd3db8f5cc8257b0e7bf06647edea938 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 1.4E-39 T 14-10-2018 JV59_02100 bd3db8f5cc8257b0e7bf06647edea938 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 1.4E-39 T 14-10-2018 JV59_02100 bd3db8f5cc8257b0e7bf06647edea938 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 1.4E-39 T 14-10-2018 JV59_02100 bd3db8f5cc8257b0e7bf06647edea938 379 SUPERFAMILY SSF52021 4 142 2.88E-58 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JV59_02100 bd3db8f5cc8257b0e7bf06647edea938 379 Gene3D G3DSA:3.40.50.880 152 378 8.1E-76 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_20735 9236cac8d583bd1d52cf861b89321f4d 646 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 304 2.6E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_20735 9236cac8d583bd1d52cf861b89321f4d 646 SMART SM00388 239 304 2.2E-25 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_20735 9236cac8d583bd1d52cf861b89321f4d 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 7.1E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_20735 9236cac8d583bd1d52cf861b89321f4d 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 444 7.1E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_20735 9236cac8d583bd1d52cf861b89321f4d 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 463 7.1E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_20735 9236cac8d583bd1d52cf861b89321f4d 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 419 7.1E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_20735 9236cac8d583bd1d52cf861b89321f4d 646 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 464 3.8E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_20735 9236cac8d583bd1d52cf861b89321f4d 646 SMART SM00387 351 466 3.5E-39 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_20735 9236cac8d583bd1d52cf861b89321f4d 646 SMART SM00448 503 617 4.4E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_20735 9236cac8d583bd1d52cf861b89321f4d 646 Pfam PF00072 Response regulator receiver domain 505 617 3.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_20735 9236cac8d583bd1d52cf861b89321f4d 646 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 36 141 1.0E-13 T 14-10-2018 IPR033414 Periplasmic sensor domain JV59_20735 9236cac8d583bd1d52cf861b89321f4d 646 Gene3D G3DSA:3.30.565.10 303 468 1.3E-52 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_20735 9236cac8d583bd1d52cf861b89321f4d 646 SUPERFAMILY SSF55874 293 464 3.27E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_20735 9236cac8d583bd1d52cf861b89321f4d 646 Gene3D G3DSA:1.10.287.130 204 302 1.4E-27 T 14-10-2018 JV59_20735 9236cac8d583bd1d52cf861b89321f4d 646 Gene3D G3DSA:3.40.50.12740 502 644 7.7E-42 T 14-10-2018 JV59_20735 9236cac8d583bd1d52cf861b89321f4d 646 SUPERFAMILY SSF52172 502 629 2.99E-38 T 14-10-2018 IPR011006 CheY-like superfamily JV59_20735 9236cac8d583bd1d52cf861b89321f4d 646 SUPERFAMILY SSF47384 224 305 8.24E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_17225 b9110c218a22a85f7419f1b41ea150df 482 SUPERFAMILY SSF53383 93 472 1.24E-73 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_17225 b9110c218a22a85f7419f1b41ea150df 482 SUPERFAMILY SSF46785 10 77 6.39E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_17225 b9110c218a22a85f7419f1b41ea150df 482 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 73 3.9E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_17225 b9110c218a22a85f7419f1b41ea150df 482 Gene3D G3DSA:3.90.1150.10 97 470 2.0E-78 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_17225 b9110c218a22a85f7419f1b41ea150df 482 SMART SM00345 14 73 5.6E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_17225 b9110c218a22a85f7419f1b41ea150df 482 Gene3D G3DSA:3.40.640.10 142 358 2.0E-78 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_17225 b9110c218a22a85f7419f1b41ea150df 482 Gene3D G3DSA:1.10.10.10 7 75 1.3E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_17225 b9110c218a22a85f7419f1b41ea150df 482 Pfam PF00155 Aminotransferase class I and II 138 452 2.5E-24 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JV59_40200 db6017039608bd3e1b98b6c9fb276080 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 368 2.7E-193 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 JV59_40200 db6017039608bd3e1b98b6c9fb276080 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 368 3.1E-189 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 JV59_40200 db6017039608bd3e1b98b6c9fb276080 369 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site JV59_40200 db6017039608bd3e1b98b6c9fb276080 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site JV59_40200 db6017039608bd3e1b98b6c9fb276080 369 Gene3D G3DSA:3.40.1350.30 45 189 5.7E-141 T 14-10-2018 JV59_40200 db6017039608bd3e1b98b6c9fb276080 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 45.129 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 JV59_40200 db6017039608bd3e1b98b6c9fb276080 369 Gene3D G3DSA:3.40.50.150 13 364 5.7E-141 T 14-10-2018 JV59_40200 db6017039608bd3e1b98b6c9fb276080 369 SUPERFAMILY SSF53335 10 367 9.44E-57 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_38645 8b40193ede8057b641ae527e8c22830d 268 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 268 43.857 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 JV59_38645 8b40193ede8057b641ae527e8c22830d 268 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 128 217 2.7E-29 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 JV59_38645 8b40193ede8057b641ae527e8c22830d 268 SUPERFAMILY SSF81624 2 137 9.68E-41 T 14-10-2018 IPR035937 MutM-like, N-terminal JV59_38645 8b40193ede8057b641ae527e8c22830d 268 SMART SM00898 2 115 5.6E-51 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 JV59_38645 8b40193ede8057b641ae527e8c22830d 268 Pfam PF06827 Zinc finger found in FPG and IleRS 240 268 1.2E-9 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 JV59_38645 8b40193ede8057b641ae527e8c22830d 268 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 267 2.3E-97 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 JV59_38645 8b40193ede8057b641ae527e8c22830d 268 Gene3D G3DSA:1.10.8.50 130 268 1.2E-49 T 14-10-2018 JV59_38645 8b40193ede8057b641ae527e8c22830d 268 SUPERFAMILY SSF46946 129 220 6.41E-31 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 JV59_38645 8b40193ede8057b641ae527e8c22830d 268 SMART SM01232 128 220 1.6E-46 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 JV59_38645 8b40193ede8057b641ae527e8c22830d 268 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 5.5E-32 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 JV59_38645 8b40193ede8057b641ae527e8c22830d 268 Gene3D G3DSA:3.20.190.10 2 127 6.4E-41 T 14-10-2018 IPR035937 MutM-like, N-terminal JV59_38645 8b40193ede8057b641ae527e8c22830d 268 ProSitePatterns PS01242 Zinc finger FPG-type signature. 243 267 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 JV59_38645 8b40193ede8057b641ae527e8c22830d 268 SUPERFAMILY SSF57716 216 268 3.99E-16 T 14-10-2018 JV59_22030 69c2ec53b189e010e46e81300695d5df 467 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 7 91 1.1E-32 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 JV59_22030 69c2ec53b189e010e46e81300695d5df 467 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 118 456 2.0E-51 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 JV59_22030 69c2ec53b189e010e46e81300695d5df 467 Gene3D G3DSA:3.40.50.2300 1 103 4.3E-37 T 14-10-2018 JV59_22030 69c2ec53b189e010e46e81300695d5df 467 SUPERFAMILY SSF52794 5 100 2.62E-32 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 JV59_22030 69c2ec53b189e010e46e81300695d5df 467 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 8 94 9.4E-18 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 JV59_22030 69c2ec53b189e010e46e81300695d5df 467 Pfam PF02378 Phosphotransferase system, EIIC 131 407 1.7E-15 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 JV59_26705 5879d1559f960fbfdf3f0bf4384fa0ab 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.667 T 14-10-2018 IPR005583 Peroxide stress protein YaaA JV59_26705 5879d1559f960fbfdf3f0bf4384fa0ab 257 Pfam PF03883 Peroxide stress protein YaaA 1 243 6.2E-95 T 14-10-2018 IPR005583 Peroxide stress protein YaaA JV59_23405 b036c4c5d3e347b3730bee60b0ff0576 316 Gene3D G3DSA:3.40.190.10 27 303 1.4E-72 T 14-10-2018 JV59_23405 b036c4c5d3e347b3730bee60b0ff0576 316 SUPERFAMILY SSF53850 29 311 1.9E-49 T 14-10-2018 JV59_23405 b036c4c5d3e347b3730bee60b0ff0576 316 Pfam PF09084 NMT1/THI5 like 37 248 1.3E-70 T 14-10-2018 IPR015168 SsuA/THI5-like JV59_23405 b036c4c5d3e347b3730bee60b0ff0576 316 Gene3D G3DSA:3.40.190.10 109 209 1.4E-72 T 14-10-2018 JV59_21055 90410be550e63fc574ed734dd7c7486f 530 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 187 349 2.2E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_21055 90410be550e63fc574ed734dd7c7486f 530 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 150 179 7.1E-6 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_21055 90410be550e63fc574ed734dd7c7486f 530 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 249 278 7.1E-6 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_21055 90410be550e63fc574ed734dd7c7486f 530 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 401 523 7.7E-35 T 14-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 JV59_21055 90410be550e63fc574ed734dd7c7486f 530 SUPERFAMILY SSF58104 128 391 3.92E-62 T 14-10-2018 JV59_21055 90410be550e63fc574ed734dd7c7486f 530 SUPERFAMILY SSF47188 398 522 1.7E-29 T 14-10-2018 IPR035938 Hemerythrin-like superfamily JV59_21055 90410be550e63fc574ed734dd7c7486f 530 Pfam PF01814 Hemerythrin HHE cation binding domain 410 519 1.1E-9 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 JV59_21055 90410be550e63fc574ed734dd7c7486f 530 Gene3D G3DSA:1.10.287.950 87 396 4.3E-56 T 14-10-2018 JV59_21055 90410be550e63fc574ed734dd7c7486f 530 SMART SM00283 122 383 5.4E-51 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_21055 90410be550e63fc574ed734dd7c7486f 530 Gene3D G3DSA:1.20.120.50 397 530 6.1E-35 T 14-10-2018 IPR035938 Hemerythrin-like superfamily JV59_21055 90410be550e63fc574ed734dd7c7486f 530 ProSitePatterns PS00550 Hemerythrin family signature. 454 477 - T 14-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 JV59_21055 90410be550e63fc574ed734dd7c7486f 530 SMART SM00304 56 107 0.0032 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_24910 e78e923523936b9fc26776c20bd88489 176 Pfam PF00857 Isochorismatase family 5 164 7.4E-32 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 JV59_24910 e78e923523936b9fc26776c20bd88489 176 Gene3D G3DSA:3.40.50.850 1 175 1.6E-40 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 JV59_24910 e78e923523936b9fc26776c20bd88489 176 SUPERFAMILY SSF52499 2 172 4.06E-44 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 JV59_27675 b9d14077ceb5b5019b7c9f494fb036f6 398 Pfam PF07559 Flagellar basal body protein FlaE 172 279 2.6E-24 T 14-10-2018 IPR011491 Flagellar hook protein FlgE JV59_27675 b9d14077ceb5b5019b7c9f494fb036f6 398 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 319 396 1.2E-17 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JV59_27675 b9d14077ceb5b5019b7c9f494fb036f6 398 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 380 2.6E-95 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G JV59_27675 b9d14077ceb5b5019b7c9f494fb036f6 398 SUPERFAMILY SSF117143 73 359 1.57E-81 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like JV59_27675 b9d14077ceb5b5019b7c9f494fb036f6 398 Gene3D G3DSA:2.60.98.20 144 280 6.2E-34 T 14-10-2018 IPR037058 Flagellar hook protein FlgE superfamily JV59_27675 b9d14077ceb5b5019b7c9f494fb036f6 398 Pfam PF00460 Flagella basal body rod protein 3 33 3.0E-9 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 JV59_00270 00e5f3307c93b71e65266b33751f0c8f 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 JV59_00270 00e5f3307c93b71e65266b33751f0c8f 355 SUPERFAMILY SSF51726 1 354 2.96E-123 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 JV59_00270 00e5f3307c93b71e65266b33751f0c8f 355 Gene3D G3DSA:3.20.20.210 1 355 1.4E-159 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 JV59_00270 00e5f3307c93b71e65266b33751f0c8f 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 2.1E-140 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 JV59_00270 00e5f3307c93b71e65266b33751f0c8f 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 JV59_00270 00e5f3307c93b71e65266b33751f0c8f 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 50.834 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 JV59_00270 00e5f3307c93b71e65266b33751f0c8f 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 1.2E-142 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 JV59_11870 f332a7a09c2eedb23c8b377b79123b28 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 1.6E-123 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 JV59_11870 f332a7a09c2eedb23c8b377b79123b28 272 SUPERFAMILY SSF52540 23 258 3.94E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_11870 f332a7a09c2eedb23c8b377b79123b28 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_11870 f332a7a09c2eedb23c8b377b79123b28 272 Pfam PF00005 ABC transporter 41 197 1.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_11870 f332a7a09c2eedb23c8b377b79123b28 272 Gene3D G3DSA:3.40.50.300 21 268 6.4E-65 T 14-10-2018 JV59_11870 f332a7a09c2eedb23c8b377b79123b28 272 SMART SM00382 50 252 7.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_35275 dd4d5fa0920439647284de204df07bb0 377 SUPERFAMILY SSF64518 1 376 2.09E-96 T 14-10-2018 JV59_35275 dd4d5fa0920439647284de204df07bb0 377 Gene3D G3DSA:1.20.1330.10 44 327 2.2E-77 T 14-10-2018 JV59_35275 dd4d5fa0920439647284de204df07bb0 377 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JV59_35275 dd4d5fa0920439647284de204df07bb0 377 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JV59_35275 dd4d5fa0920439647284de204df07bb0 377 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JV59_35275 dd4d5fa0920439647284de204df07bb0 377 Pfam PF07196 Flagellin hook IN motif 195 248 1.7E-11 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 JV59_35275 dd4d5fa0920439647284de204df07bb0 377 Gene3D G3DSA:1.10.8.410 328 376 6.0E-20 T 14-10-2018 JV59_35275 dd4d5fa0920439647284de204df07bb0 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 1.0E-41 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JV59_35275 dd4d5fa0920439647284de204df07bb0 377 Gene3D G3DSA:3.30.70.2120 174 275 2.2E-77 T 14-10-2018 JV59_35275 dd4d5fa0920439647284de204df07bb0 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 7.1E-26 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JV59_28430 38c889efc174dfbbfc713bcf29eafbcb 492 SUPERFAMILY SSF53720 19 475 1.07E-108 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JV59_28430 38c889efc174dfbbfc713bcf29eafbcb 492 Gene3D G3DSA:3.40.605.10 34 451 1.2E-145 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JV59_28430 38c889efc174dfbbfc713bcf29eafbcb 492 Gene3D G3DSA:3.40.309.10 233 431 1.2E-145 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JV59_28430 38c889efc174dfbbfc713bcf29eafbcb 492 Pfam PF00171 Aldehyde dehydrogenase family 42 451 6.1E-83 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JV59_28430 38c889efc174dfbbfc713bcf29eafbcb 492 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 229 236 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JV59_28430 38c889efc174dfbbfc713bcf29eafbcb 492 PIRSF PIRSF036492 7 489 1.4E-149 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 JV59_28560 2d7722b487fb5882ab2ced7ff842a99b 246 Gene3D G3DSA:3.40.190.10 33 222 9.5E-27 T 14-10-2018 JV59_28560 2d7722b487fb5882ab2ced7ff842a99b 246 Gene3D G3DSA:3.40.190.10 107 202 9.5E-27 T 14-10-2018 JV59_28560 2d7722b487fb5882ab2ced7ff842a99b 246 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 218 1.2E-21 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_28560 2d7722b487fb5882ab2ced7ff842a99b 246 SUPERFAMILY SSF53850 22 228 4.58E-34 T 14-10-2018 JV59_22680 e67fe1453771c4d8aa8df0625920f644 264 SUPERFAMILY SSF81301 2 74 1.83E-8 T 14-10-2018 JV59_22680 e67fe1453771c4d8aa8df0625920f644 264 Pfam PF01909 Nucleotidyltransferase domain 17 72 5.1E-5 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 JV59_22680 e67fe1453771c4d8aa8df0625920f644 264 Gene3D G3DSA:3.30.460.10 10 141 1.9E-16 T 14-10-2018 JV59_37255 f0913e2a5c37b980c38d69559e830eda 395 PIRSF PIRSF000726 3 63 1.3E-23 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JV59_37255 f0913e2a5c37b980c38d69559e830eda 395 PIRSF PIRSF000726 290 386 0.0065 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JV59_37255 f0913e2a5c37b980c38d69559e830eda 395 PIRSF PIRSF000726 60 292 7.8E-72 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JV59_37255 f0913e2a5c37b980c38d69559e830eda 395 Pfam PF00696 Amino acid kinase family 5 231 1.5E-52 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 JV59_37255 f0913e2a5c37b980c38d69559e830eda 395 SUPERFAMILY SSF53633 6 243 4.06E-75 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JV59_37255 f0913e2a5c37b980c38d69559e830eda 395 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JV59_37255 f0913e2a5c37b980c38d69559e830eda 395 Gene3D G3DSA:3.40.1160.10 4 258 2.4E-87 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JV59_37255 f0913e2a5c37b980c38d69559e830eda 395 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 65 379 1.4E-74 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JV59_33490 f09810a11f7081726d3334533fbc0481 111 Pfam PF05656 Protein of unknown function (DUF805) 12 105 1.5E-19 T 14-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 JV59_21455 e139c5d79bd604c703be2d7ee6e0fbac 312 SMART SM00342 223 306 9.0E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_21455 e139c5d79bd604c703be2d7ee6e0fbac 312 Pfam PF01965 DJ-1/PfpI family 35 169 7.6E-12 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 JV59_21455 e139c5d79bd604c703be2d7ee6e0fbac 312 SUPERFAMILY SSF46689 209 257 8.96E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_21455 e139c5d79bd604c703be2d7ee6e0fbac 312 Pfam PF12833 Helix-turn-helix domain 229 307 1.3E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_21455 e139c5d79bd604c703be2d7ee6e0fbac 312 Gene3D G3DSA:3.40.50.880 1 203 6.6E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_21455 e139c5d79bd604c703be2d7ee6e0fbac 312 SUPERFAMILY SSF52317 1 190 4.11E-41 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_21455 e139c5d79bd604c703be2d7ee6e0fbac 312 SUPERFAMILY SSF46689 260 309 4.66E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_21455 e139c5d79bd604c703be2d7ee6e0fbac 312 Gene3D G3DSA:1.10.10.60 207 311 2.7E-27 T 14-10-2018 JV59_20075 062f68a3f3ec2e908cd892b359c4fe3a 376 SUPERFAMILY SSF52172 7 152 2.13E-41 T 14-10-2018 IPR011006 CheY-like superfamily JV59_20075 062f68a3f3ec2e908cd892b359c4fe3a 376 Gene3D G3DSA:3.40.50.2300 2 144 6.4E-40 T 14-10-2018 JV59_20075 062f68a3f3ec2e908cd892b359c4fe3a 376 SMART SM00448 6 118 4.9E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_20075 062f68a3f3ec2e908cd892b359c4fe3a 376 Gene3D G3DSA:1.10.3210.10 145 362 4.6E-78 T 14-10-2018 JV59_20075 062f68a3f3ec2e908cd892b359c4fe3a 376 Pfam PF01966 HD domain 172 308 4.6E-17 T 14-10-2018 IPR006674 HD domain JV59_20075 062f68a3f3ec2e908cd892b359c4fe3a 376 SUPERFAMILY SSF109604 146 347 2.67E-31 T 14-10-2018 JV59_20075 062f68a3f3ec2e908cd892b359c4fe3a 376 SMART SM00471 167 318 1.6E-10 T 14-10-2018 IPR003607 HD/PDEase domain JV59_20075 062f68a3f3ec2e908cd892b359c4fe3a 376 Pfam PF00072 Response regulator receiver domain 8 119 4.6E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_19340 9bde5c8d86fb9ee942594a58b7801d16 479 SUPERFAMILY SSF51905 13 296 1.08E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_19340 9bde5c8d86fb9ee942594a58b7801d16 479 Pfam PF01266 FAD dependent oxidoreductase 13 373 3.3E-16 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JV59_19340 9bde5c8d86fb9ee942594a58b7801d16 479 Gene3D G3DSA:3.50.50.60 9 101 1.9E-9 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_23430 7a924bdd6723ecaf8c7eb3b8ccc3b3f5 284 SMART SM00342 18 101 6.5E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_23430 7a924bdd6723ecaf8c7eb3b8ccc3b3f5 284 Pfam PF06445 GyrI-like small molecule binding domain 129 280 4.9E-29 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain JV59_23430 7a924bdd6723ecaf8c7eb3b8ccc3b3f5 284 Gene3D G3DSA:1.10.10.60 55 110 7.8E-16 T 14-10-2018 JV59_23430 7a924bdd6723ecaf8c7eb3b8ccc3b3f5 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 85 101 6.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_23430 7a924bdd6723ecaf8c7eb3b8ccc3b3f5 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 70 85 6.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_23430 7a924bdd6723ecaf8c7eb3b8ccc3b3f5 284 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 97 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JV59_23430 7a924bdd6723ecaf8c7eb3b8ccc3b3f5 284 Gene3D G3DSA:1.10.10.60 2 54 1.6E-15 T 14-10-2018 JV59_23430 7a924bdd6723ecaf8c7eb3b8ccc3b3f5 284 Pfam PF12833 Helix-turn-helix domain 24 102 4.5E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_23430 7a924bdd6723ecaf8c7eb3b8ccc3b3f5 284 SMART SM00871 129 281 1.0E-30 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding JV59_23430 7a924bdd6723ecaf8c7eb3b8ccc3b3f5 284 SUPERFAMILY SSF46689 2 52 2.78E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_23430 7a924bdd6723ecaf8c7eb3b8ccc3b3f5 284 SUPERFAMILY SSF55136 129 283 3.14E-26 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily JV59_23430 7a924bdd6723ecaf8c7eb3b8ccc3b3f5 284 SUPERFAMILY SSF46689 54 103 5.38E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_23430 7a924bdd6723ecaf8c7eb3b8ccc3b3f5 284 Gene3D G3DSA:3.20.80.10 129 284 8.9E-35 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily JV59_19165 b33e183d6028ff89e3ae8412cbf41805 360 SUPERFAMILY SSF53474 22 348 3.05E-67 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_19165 b33e183d6028ff89e3ae8412cbf41805 360 Pfam PF00561 alpha/beta hydrolase fold 81 332 1.4E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_19165 b33e183d6028ff89e3ae8412cbf41805 360 Gene3D G3DSA:3.40.50.1820 20 356 7.3E-95 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_19165 b33e183d6028ff89e3ae8412cbf41805 360 PIRSF PIRSF000443 1 356 2.9E-80 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 JV59_34005 7906bd4f0b4cf346f70e0bf082e17540 727 SUPERFAMILY SSF53474 307 459 7.01E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_34005 7906bd4f0b4cf346f70e0bf082e17540 727 Gene3D G3DSA:3.40.50.1820 308 465 4.6E-11 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_36915 875e4155b4fb6e5bff36b4076515f92b 439 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 439 65.99 T 14-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 JV59_36915 875e4155b4fb6e5bff36b4076515f92b 439 SUPERFAMILY SSF50249 18 74 2.17E-12 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_36915 875e4155b4fb6e5bff36b4076515f92b 439 Gene3D G3DSA:3.40.50.150 89 433 2.8E-117 T 14-10-2018 JV59_36915 875e4155b4fb6e5bff36b4076515f92b 439 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 100 436 1.2E-30 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 JV59_36915 875e4155b4fb6e5bff36b4076515f92b 439 SUPERFAMILY SSF53335 77 438 5.28E-83 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_36915 875e4155b4fb6e5bff36b4076515f92b 439 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 400 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site JV59_36915 875e4155b4fb6e5bff36b4076515f92b 439 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 431 9.6E-127 T 14-10-2018 JV59_36915 875e4155b4fb6e5bff36b4076515f92b 439 Gene3D G3DSA:3.40.1350.30 135 271 2.8E-117 T 14-10-2018 JV59_36915 875e4155b4fb6e5bff36b4076515f92b 439 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site JV59_36915 875e4155b4fb6e5bff36b4076515f92b 439 Pfam PF01938 TRAM domain 17 67 1.4E-7 T 14-10-2018 IPR002792 TRAM domain JV59_36915 875e4155b4fb6e5bff36b4076515f92b 439 Gene3D G3DSA:2.40.50.140 1 88 1.9E-30 T 14-10-2018 JV59_36540 0bc9296f86cc22ebc79886d081296aaa 347 Pfam PF13416 Bacterial extracellular solute-binding protein 37 301 9.5E-23 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein JV59_36540 0bc9296f86cc22ebc79886d081296aaa 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 242 261 3.7E-14 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_36540 0bc9296f86cc22ebc79886d081296aaa 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 157 176 3.7E-14 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_36540 0bc9296f86cc22ebc79886d081296aaa 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 27 43 3.7E-14 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_36540 0bc9296f86cc22ebc79886d081296aaa 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 112 128 3.7E-14 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_36540 0bc9296f86cc22ebc79886d081296aaa 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 287 313 3.7E-14 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_36540 0bc9296f86cc22ebc79886d081296aaa 347 Gene3D G3DSA:3.40.190.10 26 309 1.8E-61 T 14-10-2018 JV59_36540 0bc9296f86cc22ebc79886d081296aaa 347 Gene3D G3DSA:3.40.190.10 121 314 1.8E-61 T 14-10-2018 JV59_36540 0bc9296f86cc22ebc79886d081296aaa 347 SUPERFAMILY SSF53850 24 340 5.67E-53 T 14-10-2018 JV59_02320 96bda7549d9174f32dcccb160a407534 643 SMART SM00490 249 330 9.2E-28 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_02320 96bda7549d9174f32dcccb160a407534 643 Gene3D G3DSA:3.40.50.300 1 206 8.9E-70 T 14-10-2018 JV59_02320 96bda7549d9174f32dcccb160a407534 643 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 138 147 - T 14-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site JV59_02320 96bda7549d9174f32dcccb160a407534 643 SUPERFAMILY SSF52540 64 345 2.29E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_02320 96bda7549d9174f32dcccb160a407534 643 Pfam PF16124 RecQ zinc-binding 517 563 5.5E-7 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain JV59_02320 96bda7549d9174f32dcccb160a407534 643 Pfam PF00271 Helicase conserved C-terminal domain 222 329 4.5E-19 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_02320 96bda7549d9174f32dcccb160a407534 643 Pfam PF00270 DEAD/DEAH box helicase 25 185 9.0E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JV59_02320 96bda7549d9174f32dcccb160a407534 643 SMART SM00487 19 213 1.5E-28 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JV59_02320 96bda7549d9174f32dcccb160a407534 643 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 14 357 7.6E-114 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 JV59_02320 96bda7549d9174f32dcccb160a407534 643 Gene3D G3DSA:3.40.50.300 207 395 6.5E-47 T 14-10-2018 JV59_02320 96bda7549d9174f32dcccb160a407534 643 Gene3D G3DSA:1.10.10.10 503 643 6.2E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_30465 b2fc68f99610e6b0de73f0d928c05884 252 SUPERFAMILY SSF53790 8 251 1.57E-78 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 JV59_30465 b2fc68f99610e6b0de73f0d928c05884 252 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 17 31 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 JV59_30465 b2fc68f99610e6b0de73f0d928c05884 252 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 15 223 6.8E-50 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 JV59_30465 b2fc68f99610e6b0de73f0d928c05884 252 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 12 245 1.6E-93 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 JV59_30465 b2fc68f99610e6b0de73f0d928c05884 252 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 92 125 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 JV59_30465 b2fc68f99610e6b0de73f0d928c05884 252 Gene3D G3DSA:3.30.950.10 128 251 1.1E-43 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 JV59_30465 b2fc68f99610e6b0de73f0d928c05884 252 Gene3D G3DSA:3.40.1010.10 10 127 6.6E-45 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 JV59_19015 2bf23de9f8ff0086b25c57035e94ce87 230 Gene3D G3DSA:1.10.3720.10 2 224 1.7E-57 T 14-10-2018 IPR035906 MetI-like superfamily JV59_19015 2bf23de9f8ff0086b25c57035e94ce87 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 214 1.7E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_19015 2bf23de9f8ff0086b25c57035e94ce87 230 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 11 220 3.5E-71 T 14-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 JV59_19015 2bf23de9f8ff0086b25c57035e94ce87 230 SUPERFAMILY SSF161098 6 213 6.41E-48 T 14-10-2018 IPR035906 MetI-like superfamily JV59_21145 eba0614fd6d80d3e6a52675879a66deb 954 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 946 0.0 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 JV59_21145 eba0614fd6d80d3e6a52675879a66deb 954 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 952 25.731 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 JV59_21145 eba0614fd6d80d3e6a52675879a66deb 954 Pfam PF02347 Glycine cleavage system P-protein 17 438 8.1E-181 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 JV59_21145 eba0614fd6d80d3e6a52675879a66deb 954 Pfam PF02347 Glycine cleavage system P-protein 458 734 1.7E-8 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 JV59_21145 eba0614fd6d80d3e6a52675879a66deb 954 Gene3D G3DSA:3.90.1150.10 760 896 4.0E-42 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_21145 eba0614fd6d80d3e6a52675879a66deb 954 SUPERFAMILY SSF53383 17 437 1.04E-100 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_21145 eba0614fd6d80d3e6a52675879a66deb 954 Gene3D G3DSA:3.40.640.10 522 744 6.1E-59 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_21145 eba0614fd6d80d3e6a52675879a66deb 954 Gene3D G3DSA:3.40.640.10 95 353 4.5E-105 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_21145 eba0614fd6d80d3e6a52675879a66deb 954 SUPERFAMILY SSF53383 451 947 4.61E-100 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_26865 2bdc0e94887197611483c0e10c7aaea7 292 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 197 215 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 JV59_26865 2bdc0e94887197611483c0e10c7aaea7 292 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 279 4.5E-82 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 JV59_26865 2bdc0e94887197611483c0e10c7aaea7 292 SUPERFAMILY SSF55920 3 282 7.33E-82 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like JV59_26865 2bdc0e94887197611483c0e10c7aaea7 292 Hamap MF_01974 Methionine aminopeptidase [map]. 3 280 40.662 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 JV59_26865 2bdc0e94887197611483c0e10c7aaea7 292 Gene3D G3DSA:3.90.230.10 1 290 2.4E-103 T 14-10-2018 JV59_26865 2bdc0e94887197611483c0e10c7aaea7 292 Pfam PF00557 Metallopeptidase family M24 12 271 1.9E-46 T 14-10-2018 IPR000994 Peptidase M24 JV59_16795 a39745e4e96a038fef3a25e3faade6a3 597 SUPERFAMILY SSF51445 2 485 7.17E-84 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_16795 a39745e4e96a038fef3a25e3faade6a3 597 Gene3D G3DSA:2.60.40.1180 497 570 5.5E-5 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta JV59_16795 a39745e4e96a038fef3a25e3faade6a3 597 Gene3D G3DSA:3.20.20.80 226 471 3.6E-40 T 14-10-2018 JV59_16795 a39745e4e96a038fef3a25e3faade6a3 597 Pfam PF00128 Alpha amylase, catalytic domain 268 425 3.2E-12 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_16795 a39745e4e96a038fef3a25e3faade6a3 597 Pfam PF00128 Alpha amylase, catalytic domain 46 141 6.1E-8 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_16795 a39745e4e96a038fef3a25e3faade6a3 597 Gene3D G3DSA:3.20.20.80 1 181 1.1E-21 T 14-10-2018 JV59_16795 a39745e4e96a038fef3a25e3faade6a3 597 SMART SM00642 8 479 9.7E-8 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_16795 a39745e4e96a038fef3a25e3faade6a3 597 SUPERFAMILY SSF51011 504 585 1.22E-5 T 14-10-2018 JV59_02075 60b0218d0c2777e6722f47ff1321c5f3 411 Gene3D G3DSA:3.30.1330.20 221 328 1.8E-34 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 JV59_02075 60b0218d0c2777e6722f47ff1321c5f3 411 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 383 38.314 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 JV59_02075 60b0218d0c2777e6722f47ff1321c5f3 411 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 331 8.7E-138 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 JV59_02075 60b0218d0c2777e6722f47ff1321c5f3 411 PRINTS PR00423 Cell division protein FtsZ signature 189 211 5.3E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 JV59_02075 60b0218d0c2777e6722f47ff1321c5f3 411 PRINTS PR00423 Cell division protein FtsZ signature 212 233 5.3E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 JV59_02075 60b0218d0c2777e6722f47ff1321c5f3 411 PRINTS PR00423 Cell division protein FtsZ signature 126 147 5.3E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 JV59_02075 60b0218d0c2777e6722f47ff1321c5f3 411 PRINTS PR00423 Cell division protein FtsZ signature 98 118 5.3E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 JV59_02075 60b0218d0c2777e6722f47ff1321c5f3 411 Pfam PF12327 FtsZ family, C-terminal domain 222 316 2.5E-36 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal JV59_02075 60b0218d0c2777e6722f47ff1321c5f3 411 SMART SM00865 207 325 9.6E-56 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 JV59_02075 60b0218d0c2777e6722f47ff1321c5f3 411 SUPERFAMILY SSF52490 13 208 3.79E-70 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 JV59_02075 60b0218d0c2777e6722f47ff1321c5f3 411 SUPERFAMILY SSF55307 204 320 1.19E-42 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 JV59_02075 60b0218d0c2777e6722f47ff1321c5f3 411 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 6.3E-41 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 JV59_02075 60b0218d0c2777e6722f47ff1321c5f3 411 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 JV59_02075 60b0218d0c2777e6722f47ff1321c5f3 411 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 JV59_02075 60b0218d0c2777e6722f47ff1321c5f3 411 SMART SM00864 13 205 2.0E-114 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 JV59_02075 60b0218d0c2777e6722f47ff1321c5f3 411 Gene3D G3DSA:3.40.50.1440 5 220 1.6E-80 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 JV59_21560 50e9c5d3e4b0ddf52f9c252abb4f0566 492 Pfam PF03606 C4-dicarboxylate anaerobic carrier 1 487 1.2E-133 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 JV59_27595 64c5a9be760bf657dd8a9660498b9f67 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 66 84 1.4E-137 T 14-10-2018 JV59_27595 64c5a9be760bf657dd8a9660498b9f67 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 271 291 1.4E-137 T 14-10-2018 JV59_27595 64c5a9be760bf657dd8a9660498b9f67 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 3 27 1.4E-137 T 14-10-2018 JV59_27595 64c5a9be760bf657dd8a9660498b9f67 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 1.4E-137 T 14-10-2018 JV59_27595 64c5a9be760bf657dd8a9660498b9f67 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 145 1.4E-137 T 14-10-2018 JV59_27595 64c5a9be760bf657dd8a9660498b9f67 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 251 270 1.4E-137 T 14-10-2018 JV59_27595 64c5a9be760bf657dd8a9660498b9f67 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 174 201 1.4E-137 T 14-10-2018 JV59_27595 64c5a9be760bf657dd8a9660498b9f67 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 204 230 1.4E-137 T 14-10-2018 JV59_27595 64c5a9be760bf657dd8a9660498b9f67 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 233 250 1.4E-137 T 14-10-2018 JV59_27595 64c5a9be760bf657dd8a9660498b9f67 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 1.4E-137 T 14-10-2018 JV59_27595 64c5a9be760bf657dd8a9660498b9f67 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 45 63 1.4E-137 T 14-10-2018 JV59_27595 64c5a9be760bf657dd8a9660498b9f67 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 28 44 1.4E-137 T 14-10-2018 JV59_27595 64c5a9be760bf657dd8a9660498b9f67 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 167 1.4E-137 T 14-10-2018 JV59_27595 64c5a9be760bf657dd8a9660498b9f67 293 Pfam PF00691 OmpA family 187 282 1.4E-18 T 14-10-2018 IPR006665 OmpA-like domain JV59_27595 64c5a9be760bf657dd8a9660498b9f67 293 Gene3D G3DSA:3.30.1330.60 176 293 5.0E-36 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_27595 64c5a9be760bf657dd8a9660498b9f67 293 Gene3D G3DSA:2.60.40.2540 22 175 1.3E-56 T 14-10-2018 JV59_27595 64c5a9be760bf657dd8a9660498b9f67 293 SUPERFAMILY SSF103088 159 287 1.83E-25 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_38720 77d78cef4d741051d4afd7322f9b3d4e 1127 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 838 874 0.021 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JV59_38720 77d78cef4d741051d4afd7322f9b3d4e 1127 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 503 538 0.018 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JV59_38720 77d78cef4d741051d4afd7322f9b3d4e 1127 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 796 835 5.0E-4 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JV59_38720 77d78cef4d741051d4afd7322f9b3d4e 1127 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 946 975 0.023 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JV59_38720 77d78cef4d741051d4afd7322f9b3d4e 1127 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 719 753 0.02 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JV59_38720 77d78cef4d741051d4afd7322f9b3d4e 1127 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1041 1076 1.6 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JV59_38720 77d78cef4d741051d4afd7322f9b3d4e 1127 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 601 636 1.6 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JV59_38720 77d78cef4d741051d4afd7322f9b3d4e 1127 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 757 786 0.032 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JV59_38720 77d78cef4d741051d4afd7322f9b3d4e 1127 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 659 691 0.0028 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JV59_38720 77d78cef4d741051d4afd7322f9b3d4e 1127 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 855 894 0.69 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JV59_38720 77d78cef4d741051d4afd7322f9b3d4e 1127 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 582 612 0.077 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JV59_38720 77d78cef4d741051d4afd7322f9b3d4e 1127 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1022 1052 0.077 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JV59_38720 77d78cef4d741051d4afd7322f9b3d4e 1127 Gene3D G3DSA:2.160.20.10 32 342 6.0E-98 T 14-10-2018 IPR012334 Pectin lyase fold JV59_38720 77d78cef4d741051d4afd7322f9b3d4e 1127 Pfam PF05594 Haemagluttinin repeat 877 932 86.0 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat JV59_38720 77d78cef4d741051d4afd7322f9b3d4e 1127 Pfam PF05594 Haemagluttinin repeat 213 305 1.1E-4 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat JV59_38720 77d78cef4d741051d4afd7322f9b3d4e 1127 Pfam PF05594 Haemagluttinin repeat 405 515 8.3 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat JV59_38720 77d78cef4d741051d4afd7322f9b3d4e 1127 SMART SM00912 44 165 1.1E-49 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal JV59_38720 77d78cef4d741051d4afd7322f9b3d4e 1127 Pfam PF05860 haemagglutination activity domain 32 164 6.7E-35 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal JV59_38720 77d78cef4d741051d4afd7322f9b3d4e 1127 SUPERFAMILY SSF51126 39 313 5.96E-64 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor JV59_38720 77d78cef4d741051d4afd7322f9b3d4e 1127 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 62 160 1.7E-21 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal JV59_21700 014ff57724ead564ca1600a38f9443aa 351 Pfam PF03193 RsgA GTPase 83 256 1.7E-47 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 JV59_21700 014ff57724ead564ca1600a38f9443aa 351 Gene3D G3DSA:1.10.40.50 259 328 1.3E-22 T 14-10-2018 JV59_21700 014ff57724ead564ca1600a38f9443aa 351 Gene3D G3DSA:3.40.50.300 85 256 9.7E-43 T 14-10-2018 JV59_21700 014ff57724ead564ca1600a38f9443aa 351 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 84 313 1.6E-46 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 JV59_21700 014ff57724ead564ca1600a38f9443aa 351 SUPERFAMILY SSF52540 101 318 4.71E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_21700 014ff57724ead564ca1600a38f9443aa 351 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 33 320 31.228 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 JV59_02535 e4e6d2f6fa49322a9808b0dda584a914 444 SUPERFAMILY SSF82829 232 316 1.7E-23 T 14-10-2018 JV59_02535 e4e6d2f6fa49322a9808b0dda584a914 444 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 363 408 1.4E-15 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 JV59_02535 e4e6d2f6fa49322a9808b0dda584a914 444 Pfam PF01171 PP-loop family 21 198 6.2E-57 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 JV59_02535 e4e6d2f6fa49322a9808b0dda584a914 444 SMART SM00977 363 432 1.3E-22 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 JV59_02535 e4e6d2f6fa49322a9808b0dda584a914 444 Gene3D G3DSA:3.40.50.620 11 231 2.2E-71 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_02535 e4e6d2f6fa49322a9808b0dda584a914 444 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 20 201 9.9E-54 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 JV59_02535 e4e6d2f6fa49322a9808b0dda584a914 444 Pfam PF09179 TilS substrate binding domain 248 313 2.1E-17 T 14-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 JV59_02535 e4e6d2f6fa49322a9808b0dda584a914 444 SUPERFAMILY SSF52402 15 230 5.29E-61 T 14-10-2018 JV59_02535 e4e6d2f6fa49322a9808b0dda584a914 444 Gene3D G3DSA:1.20.59.20 232 317 1.1E-28 T 14-10-2018 JV59_02535 e4e6d2f6fa49322a9808b0dda584a914 444 Pfam PF11734 TilS substrate C-terminal domain 363 431 2.7E-22 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 JV59_02535 e4e6d2f6fa49322a9808b0dda584a914 444 SUPERFAMILY SSF56037 323 432 6.02E-25 T 14-10-2018 JV59_02535 e4e6d2f6fa49322a9808b0dda584a914 444 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 307 23.664 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 JV59_30315 22abb7ad186f503eda889c4e2f5575f7 513 Pfam PF11230 Protein of unknown function (DUF3029) 21 502 1.0E-227 T 14-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted JV59_30315 22abb7ad186f503eda889c4e2f5575f7 513 PIRSF PIRSF028991 5 513 6.7E-281 T 14-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted JV59_30315 22abb7ad186f503eda889c4e2f5575f7 513 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 10 502 8.4E-232 T 14-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted JV59_30315 22abb7ad186f503eda889c4e2f5575f7 513 SUPERFAMILY SSF51998 18 465 2.35E-94 T 14-10-2018 JV59_35040 6c6df7209c04916338970adbe96773ae 1092 Pfam PF07494 Two component regulator propeller 268 289 0.013 T 14-10-2018 IPR011110 Two component regulator propeller JV59_35040 6c6df7209c04916338970adbe96773ae 1092 SUPERFAMILY SSF46689 1041 1088 4.12E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_35040 6c6df7209c04916338970adbe96773ae 1092 SMART SM00342 1005 1087 1.4E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_35040 6c6df7209c04916338970adbe96773ae 1092 Gene3D G3DSA:2.130.10.10 20 297 4.2E-20 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 JV59_35040 6c6df7209c04916338970adbe96773ae 1092 Gene3D G3DSA:2.130.10.10 301 576 2.9E-23 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 JV59_35040 6c6df7209c04916338970adbe96773ae 1092 SUPERFAMILY SSF63829 365 566 6.41E-9 T 14-10-2018 JV59_35040 6c6df7209c04916338970adbe96773ae 1092 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1042 1083 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JV59_35040 6c6df7209c04916338970adbe96773ae 1092 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1071 1087 2.8E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_35040 6c6df7209c04916338970adbe96773ae 1092 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1056 1071 2.8E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_35040 6c6df7209c04916338970adbe96773ae 1092 Pfam PF12833 Helix-turn-helix domain 1012 1087 1.2E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_35040 6c6df7209c04916338970adbe96773ae 1092 Gene3D G3DSA:1.10.10.60 985 1092 5.6E-27 T 14-10-2018 JV59_21705 9116d081178309fcfd31a6acb9bb50b0 405 Gene3D G3DSA:1.10.3860.10 3 405 1.8E-71 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 JV59_21705 9116d081178309fcfd31a6acb9bb50b0 405 PRINTS PR00173 Glutamate-aspartate symporter signature 185 204 1.8E-14 T 14-10-2018 JV59_21705 9116d081178309fcfd31a6acb9bb50b0 405 PRINTS PR00173 Glutamate-aspartate symporter signature 220 239 1.8E-14 T 14-10-2018 JV59_21705 9116d081178309fcfd31a6acb9bb50b0 405 PRINTS PR00173 Glutamate-aspartate symporter signature 349 369 1.8E-14 T 14-10-2018 JV59_21705 9116d081178309fcfd31a6acb9bb50b0 405 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 1.8E-14 T 14-10-2018 JV59_21705 9116d081178309fcfd31a6acb9bb50b0 405 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 1.8E-14 T 14-10-2018 JV59_21705 9116d081178309fcfd31a6acb9bb50b0 405 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 1.8E-14 T 14-10-2018 JV59_21705 9116d081178309fcfd31a6acb9bb50b0 405 SUPERFAMILY SSF118215 15 398 5.75E-97 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 JV59_21705 9116d081178309fcfd31a6acb9bb50b0 405 Pfam PF00375 Sodium:dicarboxylate symporter family 15 398 2.4E-66 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 JV59_21705 9116d081178309fcfd31a6acb9bb50b0 405 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 3 404 36.216 T 14-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 JV59_16790 cd06d9aaafafa1a2c23f016b6db4b415 615 Pfam PF00128 Alpha amylase, catalytic domain 179 497 5.8E-78 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_16790 cd06d9aaafafa1a2c23f016b6db4b415 615 Gene3D G3DSA:3.20.20.80 115 526 8.0E-140 T 14-10-2018 JV59_16790 cd06d9aaafafa1a2c23f016b6db4b415 615 PIRSF PIRSF036918 1 614 5.0E-239 T 14-10-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 JV59_16790 cd06d9aaafafa1a2c23f016b6db4b415 615 Gene3D G3DSA:2.60.40.1180 527 613 8.8E-10 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta JV59_16790 cd06d9aaafafa1a2c23f016b6db4b415 615 SUPERFAMILY SSF51011 533 613 1.7E-8 T 14-10-2018 JV59_16790 cd06d9aaafafa1a2c23f016b6db4b415 615 Gene3D G3DSA:2.60.40.10 5 112 4.4E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_16790 cd06d9aaafafa1a2c23f016b6db4b415 615 SMART SM00642 127 524 9.8E-90 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_16790 cd06d9aaafafa1a2c23f016b6db4b415 615 SUPERFAMILY SSF81296 1 110 8.12E-18 T 14-10-2018 IPR014756 Immunoglobulin E-set JV59_16790 cd06d9aaafafa1a2c23f016b6db4b415 615 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 5 110 2.6E-6 T 14-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 JV59_16790 cd06d9aaafafa1a2c23f016b6db4b415 615 SUPERFAMILY SSF51445 115 533 7.79E-98 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_40185 88749f25cd0733774595e42cf31283ff 466 SUPERFAMILY SSF51905 4 319 8.17E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_40185 88749f25cd0733774595e42cf31283ff 466 Gene3D G3DSA:3.50.50.60 158 276 3.9E-93 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_40185 88749f25cd0733774595e42cf31283ff 466 PIRSF PIRSF000350 1 463 1.1E-70 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 JV59_40185 88749f25cd0733774595e42cf31283ff 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 65.016 T 14-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 JV59_40185 88749f25cd0733774595e42cf31283ff 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 1.0E-28 T 14-10-2018 JV59_40185 88749f25cd0733774595e42cf31283ff 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 1.0E-28 T 14-10-2018 JV59_40185 88749f25cd0733774595e42cf31283ff 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 1.0E-28 T 14-10-2018 JV59_40185 88749f25cd0733774595e42cf31283ff 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.0E-28 T 14-10-2018 JV59_40185 88749f25cd0733774595e42cf31283ff 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 1.0E-28 T 14-10-2018 JV59_40185 88749f25cd0733774595e42cf31283ff 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 4.7E-60 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JV59_40185 88749f25cd0733774595e42cf31283ff 466 Gene3D G3DSA:3.30.390.30 345 464 1.8E-32 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JV59_40185 88749f25cd0733774595e42cf31283ff 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 4.9E-52 T 14-10-2018 JV59_40185 88749f25cd0733774595e42cf31283ff 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 4.9E-52 T 14-10-2018 JV59_40185 88749f25cd0733774595e42cf31283ff 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 4.9E-52 T 14-10-2018 JV59_40185 88749f25cd0733774595e42cf31283ff 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 4.9E-52 T 14-10-2018 JV59_40185 88749f25cd0733774595e42cf31283ff 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 4.9E-52 T 14-10-2018 JV59_40185 88749f25cd0733774595e42cf31283ff 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 4.9E-52 T 14-10-2018 JV59_40185 88749f25cd0733774595e42cf31283ff 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 4.9E-52 T 14-10-2018 JV59_40185 88749f25cd0733774595e42cf31283ff 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 4.9E-52 T 14-10-2018 JV59_40185 88749f25cd0733774595e42cf31283ff 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 4.9E-52 T 14-10-2018 JV59_40185 88749f25cd0733774595e42cf31283ff 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 9.5E-30 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 JV59_40185 88749f25cd0733774595e42cf31283ff 466 Gene3D G3DSA:3.50.50.60 7 333 3.9E-93 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_40185 88749f25cd0733774595e42cf31283ff 466 SUPERFAMILY SSF55424 345 463 2.23E-30 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JV59_38850 f8423a4341f2416b24e84056c0559ff1 436 SUPERFAMILY SSF158472 175 222 6.54E-5 T 14-10-2018 JV59_38850 f8423a4341f2416b24e84056c0559ff1 436 SMART SM00304 173 225 2.1E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_38850 f8423a4341f2416b24e84056c0559ff1 436 Gene3D G3DSA:3.30.565.10 289 436 9.3E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_38850 f8423a4341f2416b24e84056c0559ff1 436 SUPERFAMILY SSF55874 289 434 8.12E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_38850 f8423a4341f2416b24e84056c0559ff1 436 Pfam PF00672 HAMP domain 173 221 7.4E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_38850 f8423a4341f2416b24e84056c0559ff1 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 2.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_38850 f8423a4341f2416b24e84056c0559ff1 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 413 2.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_38850 f8423a4341f2416b24e84056c0559ff1 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 432 2.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_38850 f8423a4341f2416b24e84056c0559ff1 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 2.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_38850 f8423a4341f2416b24e84056c0559ff1 436 Pfam PF00512 His Kinase A (phospho-acceptor) domain 229 280 4.5E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_38850 f8423a4341f2416b24e84056c0559ff1 436 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 432 1.9E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_38850 f8423a4341f2416b24e84056c0559ff1 436 SMART SM00387 325 435 3.5E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_38850 f8423a4341f2416b24e84056c0559ff1 436 SUPERFAMILY SSF47384 220 281 1.22E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_38850 f8423a4341f2416b24e84056c0559ff1 436 Gene3D G3DSA:1.10.287.130 171 281 1.1E-23 T 14-10-2018 JV59_38850 f8423a4341f2416b24e84056c0559ff1 436 SMART SM00388 226 286 5.1E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_17955 f00be58477822a85c5451c1f440f7630 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 194 5.8E-24 T 14-10-2018 JV59_17955 f00be58477822a85c5451c1f440f7630 224 SUPERFAMILY SSF56784 2 222 3.56E-49 T 14-10-2018 IPR036412 HAD-like superfamily JV59_17955 f00be58477822a85c5451c1f440f7630 224 Gene3D G3DSA:3.40.50.1000 5 218 4.6E-64 T 14-10-2018 IPR023214 HAD superfamily JV59_17955 f00be58477822a85c5451c1f440f7630 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 97 189 1.4E-16 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_17955 f00be58477822a85c5451c1f440f7630 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 222 8.4E-87 T 14-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 JV59_17955 f00be58477822a85c5451c1f440f7630 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 1.6E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_17955 f00be58477822a85c5451c1f440f7630 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 1.6E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_17955 f00be58477822a85c5451c1f440f7630 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.6E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_17955 f00be58477822a85c5451c1f440f7630 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 1.6E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_17955 f00be58477822a85c5451c1f440f7630 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 62 195 8.5E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_17955 f00be58477822a85c5451c1f440f7630 224 Gene3D G3DSA:1.10.150.240 16 95 4.6E-64 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JV59_33610 4ec80996db7c912f017ee9955692ce0b 646 SUPERFAMILY SSF55874 482 643 5.24E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_33610 4ec80996db7c912f017ee9955692ce0b 646 SUPERFAMILY SSF47384 335 375 8.04E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_33610 4ec80996db7c912f017ee9955692ce0b 646 SUPERFAMILY SSF51206 202 311 2.23E-17 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JV59_33610 4ec80996db7c912f017ee9955692ce0b 646 Gene3D G3DSA:3.40.50.2300 4 148 2.5E-8 T 14-10-2018 JV59_33610 4ec80996db7c912f017ee9955692ce0b 646 SUPERFAMILY SSF52172 4 152 1.36E-7 T 14-10-2018 IPR011006 CheY-like superfamily JV59_33610 4ec80996db7c912f017ee9955692ce0b 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 602 620 1.3E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_33610 4ec80996db7c912f017ee9955692ce0b 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 584 1.3E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_33610 4ec80996db7c912f017ee9955692ce0b 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 626 639 1.3E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_33610 4ec80996db7c912f017ee9955692ce0b 646 Pfam PF00512 His Kinase A (phospho-acceptor) domain 340 376 4.5E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_33610 4ec80996db7c912f017ee9955692ce0b 646 SMART SM00387 529 642 1.3E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_33610 4ec80996db7c912f017ee9955692ce0b 646 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 532 641 1.4E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_33610 4ec80996db7c912f017ee9955692ce0b 646 Pfam PF00027 Cyclic nucleotide-binding domain 202 288 1.2E-12 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JV59_33610 4ec80996db7c912f017ee9955692ce0b 646 Gene3D G3DSA:3.30.565.10 492 645 5.8E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_33610 4ec80996db7c912f017ee9955692ce0b 646 Gene3D G3DSA:2.60.120.10 149 318 1.4E-16 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_24065 d48b3666dfeabd2d3f8bdee4ae14d7a6 609 Gene3D G3DSA:3.90.1580.10 387 608 1.1E-52 T 14-10-2018 JV59_24065 d48b3666dfeabd2d3f8bdee4ae14d7a6 609 Pfam PF03781 Sulfatase-modifying factor enzyme 1 400 606 3.6E-45 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 JV59_24065 d48b3666dfeabd2d3f8bdee4ae14d7a6 609 Pfam PF08308 PEGA domain 299 364 1.9E-19 T 14-10-2018 IPR013229 PEGA JV59_24065 d48b3666dfeabd2d3f8bdee4ae14d7a6 609 SUPERFAMILY SSF56436 393 607 7.3E-54 T 14-10-2018 IPR016187 C-type lectin fold JV59_17370 9dc1046334ecb1269904e949d7ddbc90 260 SMART SM00382 30 219 3.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_17370 9dc1046334ecb1269904e949d7ddbc90 260 Gene3D G3DSA:3.40.50.300 2 258 2.5E-63 T 14-10-2018 JV59_17370 9dc1046334ecb1269904e949d7ddbc90 260 SUPERFAMILY SSF52540 3 232 7.02E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_17370 9dc1046334ecb1269904e949d7ddbc90 260 Pfam PF00005 ABC transporter 21 170 3.3E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_29420 7bdc7ee2e9d0e465648f5af310de60a0 497 Pfam PF00005 ABC transporter 21 172 1.8E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_29420 7bdc7ee2e9d0e465648f5af310de60a0 497 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_29420 7bdc7ee2e9d0e465648f5af310de60a0 497 SUPERFAMILY SSF52540 4 230 4.66E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_29420 7bdc7ee2e9d0e465648f5af310de60a0 497 Pfam PF00005 ABC transporter 272 427 8.1E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_29420 7bdc7ee2e9d0e465648f5af310de60a0 497 SUPERFAMILY SSF52540 246 478 8.6E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_29420 7bdc7ee2e9d0e465648f5af310de60a0 497 Gene3D G3DSA:3.40.50.300 251 495 1.8E-41 T 14-10-2018 JV59_29420 7bdc7ee2e9d0e465648f5af310de60a0 497 Gene3D G3DSA:3.40.50.300 1 243 3.0E-52 T 14-10-2018 JV59_29420 7bdc7ee2e9d0e465648f5af310de60a0 497 SMART SM00382 30 221 7.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_29420 7bdc7ee2e9d0e465648f5af310de60a0 497 SMART SM00382 280 477 5.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_23930 1a712723b27664b9ce16620f7c01228d 261 Pfam PF08282 haloacid dehalogenase-like hydrolase 18 98 9.3E-7 T 14-10-2018 JV59_23930 1a712723b27664b9ce16620f7c01228d 261 Gene3D G3DSA:3.40.50.1000 5 120 3.1E-9 T 14-10-2018 IPR023214 HAD superfamily JV59_23930 1a712723b27664b9ce16620f7c01228d 261 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 18 224 1.5E-16 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 JV59_23930 1a712723b27664b9ce16620f7c01228d 261 Gene3D G3DSA:3.40.50.1000 145 261 2.1E-7 T 14-10-2018 IPR023214 HAD superfamily JV59_23930 1a712723b27664b9ce16620f7c01228d 261 SUPERFAMILY SSF56784 12 228 1.32E-24 T 14-10-2018 IPR036412 HAD-like superfamily JV59_36715 a56e0ea583f82b6162c93286d59980b2 172 Gene3D G3DSA:3.90.79.10 1 159 1.8E-50 T 14-10-2018 JV59_36715 a56e0ea583f82b6162c93286d59980b2 172 Pfam PF00293 NUDIX domain 7 145 1.6E-26 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JV59_36715 a56e0ea583f82b6162c93286d59980b2 172 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JV59_36715 a56e0ea583f82b6162c93286d59980b2 172 PRINTS PR00502 NUDIX hydrolase family signature 47 62 4.9E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 JV59_36715 a56e0ea583f82b6162c93286d59980b2 172 PRINTS PR00502 NUDIX hydrolase family signature 33 47 4.9E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 JV59_36715 a56e0ea583f82b6162c93286d59980b2 172 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.315 T 14-10-2018 IPR022927 RNA pyrophosphohydrolase RppH JV59_36715 a56e0ea583f82b6162c93286d59980b2 172 SUPERFAMILY SSF55811 6 152 1.76E-32 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JV59_21255 3ca0639a9955044a3608fa56cec14e8e 582 Pfam PF12848 ABC transporter 207 270 5.4E-6 T 14-10-2018 IPR032781 ABC-transporter extension domain JV59_21255 3ca0639a9955044a3608fa56cec14e8e 582 SMART SM00382 322 489 9.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_21255 3ca0639a9955044a3608fa56cec14e8e 582 SMART SM00382 29 199 2.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_21255 3ca0639a9955044a3608fa56cec14e8e 582 ProSitePatterns PS00211 ABC transporters family signature. 417 431 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_21255 3ca0639a9955044a3608fa56cec14e8e 582 Gene3D G3DSA:3.40.50.300 1 236 1.6E-49 T 14-10-2018 JV59_21255 3ca0639a9955044a3608fa56cec14e8e 582 SUPERFAMILY SSF52540 4 202 9.16E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_21255 3ca0639a9955044a3608fa56cec14e8e 582 Pfam PF00005 ABC transporter 20 154 1.1E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_21255 3ca0639a9955044a3608fa56cec14e8e 582 SUPERFAMILY SSF52540 293 505 2.67E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_21255 3ca0639a9955044a3608fa56cec14e8e 582 Pfam PF00005 ABC transporter 316 445 5.1E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_21255 3ca0639a9955044a3608fa56cec14e8e 582 Gene3D G3DSA:3.40.50.300 289 507 4.2E-40 T 14-10-2018 JV59_22045 1dc3342c144379f6df54ac0128c66069 219 Pfam PF00881 Nitroreductase family 10 178 7.0E-17 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 JV59_22045 1dc3342c144379f6df54ac0128c66069 219 SUPERFAMILY SSF55469 6 217 5.63E-55 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JV59_22045 1dc3342c144379f6df54ac0128c66069 219 Gene3D G3DSA:3.40.109.10 1 218 2.3E-50 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JV59_40715 48b60149d2935d3f6e5a03dcbdca1d1b 162 SMART SM00530 34 91 9.3E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_40715 48b60149d2935d3f6e5a03dcbdca1d1b 162 Gene3D G3DSA:1.10.260.40 32 99 5.1E-9 T 14-10-2018 JV59_40715 48b60149d2935d3f6e5a03dcbdca1d1b 162 SUPERFAMILY SSF47413 34 91 5.63E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_40715 48b60149d2935d3f6e5a03dcbdca1d1b 162 TIGRFAM TIGR02612 mob_myst_A: mobile mystery protein A 10 154 1.1E-40 T 14-10-2018 IPR013435 Mobile mystery protein A JV59_29375 730e52227110482c5f75c8d84ee27d04 309 Pfam PF00294 pfkB family carbohydrate kinase 4 298 5.9E-74 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB JV59_29375 730e52227110482c5f75c8d84ee27d04 309 SUPERFAMILY SSF53613 1 307 1.87E-83 T 14-10-2018 IPR029056 Ribokinase-like JV59_29375 730e52227110482c5f75c8d84ee27d04 309 PRINTS PR00990 Ribokinase signature 24 43 7.6E-8 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 JV59_29375 730e52227110482c5f75c8d84ee27d04 309 PRINTS PR00990 Ribokinase signature 177 192 7.6E-8 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 JV59_29375 730e52227110482c5f75c8d84ee27d04 309 PRINTS PR00990 Ribokinase signature 216 227 7.6E-8 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 JV59_29375 730e52227110482c5f75c8d84ee27d04 309 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 29 53 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 JV59_29375 730e52227110482c5f75c8d84ee27d04 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 245 258 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 JV59_29375 730e52227110482c5f75c8d84ee27d04 309 Gene3D G3DSA:3.40.1190.20 3 308 1.8E-96 T 14-10-2018 IPR029056 Ribokinase-like JV59_31290 8ee7e9e0aabf389d403a94dc1f45ddce 105 Pfam PF06287 Protein of unknown function (DUF1039) 14 77 9.9E-18 T 14-10-2018 IPR010437 Type III secretion system SsaH JV59_31290 8ee7e9e0aabf389d403a94dc1f45ddce 105 TIGRFAM TIGR02498 type_III_ssaH: type III secretion system protein, SsaH family 5 77 1.6E-19 T 14-10-2018 IPR010437 Type III secretion system SsaH JV59_39080 a5aba6efab9db43f91f0cc31d00cf1ad 426 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 JV59_39080 a5aba6efab9db43f91f0cc31d00cf1ad 426 Pfam PF01029 NusB family 1 123 7.0E-26 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 JV59_39080 a5aba6efab9db43f91f0cc31d00cf1ad 426 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 422 1.7E-70 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 JV59_39080 a5aba6efab9db43f91f0cc31d00cf1ad 426 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 424 1.1E-156 T 14-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 JV59_39080 a5aba6efab9db43f91f0cc31d00cf1ad 426 Gene3D G3DSA:1.10.287.730 143 169 1.1E-12 T 14-10-2018 JV59_39080 a5aba6efab9db43f91f0cc31d00cf1ad 426 Gene3D G3DSA:3.30.70.1170 170 227 3.3E-25 T 14-10-2018 JV59_39080 a5aba6efab9db43f91f0cc31d00cf1ad 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 6.2E-31 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase JV59_39080 a5aba6efab9db43f91f0cc31d00cf1ad 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 6.2E-31 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase JV59_39080 a5aba6efab9db43f91f0cc31d00cf1ad 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 6.2E-31 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase JV59_39080 a5aba6efab9db43f91f0cc31d00cf1ad 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 6.2E-31 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase JV59_39080 a5aba6efab9db43f91f0cc31d00cf1ad 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 6.2E-31 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase JV59_39080 a5aba6efab9db43f91f0cc31d00cf1ad 426 Gene3D G3DSA:1.10.940.10 1 142 2.4E-46 T 14-10-2018 IPR035926 NusB-like superfamily JV59_39080 a5aba6efab9db43f91f0cc31d00cf1ad 426 Gene3D G3DSA:3.40.50.150 228 425 1.6E-70 T 14-10-2018 JV59_39080 a5aba6efab9db43f91f0cc31d00cf1ad 426 SUPERFAMILY SSF48013 1 146 3.66E-36 T 14-10-2018 IPR035926 NusB-like superfamily JV59_39080 a5aba6efab9db43f91f0cc31d00cf1ad 426 SUPERFAMILY SSF53335 139 425 1.25E-77 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_39240 2976e39a998c9749b83e46084323fd1c 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 166 186 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like JV59_39240 2976e39a998c9749b83e46084323fd1c 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 198 212 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like JV59_39240 2976e39a998c9749b83e46084323fd1c 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 230 244 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like JV59_39240 2976e39a998c9749b83e46084323fd1c 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 264 291 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like JV59_39240 2976e39a998c9749b83e46084323fd1c 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 426 445 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like JV59_39240 2976e39a998c9749b83e46084323fd1c 468 ProSitePatterns PS01008 DnaA protein signature. 426 445 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 JV59_39240 2976e39a998c9749b83e46084323fd1c 468 Pfam PF00308 Bacterial dnaA protein 134 350 2.1E-97 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA JV59_39240 2976e39a998c9749b83e46084323fd1c 468 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 467 34.385 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 JV59_39240 2976e39a998c9749b83e46084323fd1c 468 SMART SM00760 376 445 3.4E-45 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 JV59_39240 2976e39a998c9749b83e46084323fd1c 468 Pfam PF11638 DnaA N-terminal domain 4 65 5.3E-20 T 14-10-2018 IPR024633 DnaA N-terminal domain JV59_39240 2976e39a998c9749b83e46084323fd1c 468 Gene3D G3DSA:3.40.50.300 115 297 3.3E-49 T 14-10-2018 JV59_39240 2976e39a998c9749b83e46084323fd1c 468 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 377 445 1.8E-32 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 JV59_39240 2976e39a998c9749b83e46084323fd1c 468 Gene3D G3DSA:3.30.300.180 2 114 2.5E-41 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily JV59_39240 2976e39a998c9749b83e46084323fd1c 468 SMART SM00382 165 378 4.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_39240 2976e39a998c9749b83e46084323fd1c 468 Gene3D G3DSA:1.10.1750.10 375 468 1.5E-39 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 JV59_39240 2976e39a998c9749b83e46084323fd1c 468 SUPERFAMILY SSF52540 134 344 2.31E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_39240 2976e39a998c9749b83e46084323fd1c 468 Gene3D G3DSA:1.10.8.60 299 369 1.6E-24 T 14-10-2018 JV59_39240 2976e39a998c9749b83e46084323fd1c 468 SUPERFAMILY SSF48295 364 467 3.66E-38 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 JV59_39240 2976e39a998c9749b83e46084323fd1c 468 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 466 2.3E-186 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 JV59_35005 ddbdc05bbdc02cdf800fe5394b59d73e 924 Pfam PF16187 Middle or third domain of peptidase_M16 366 643 1.4E-82 T 14-10-2018 IPR032632 Peptidase M16, middle/third domain JV59_35005 ddbdc05bbdc02cdf800fe5394b59d73e 924 Gene3D G3DSA:3.30.830.10 240 466 1.1E-73 T 14-10-2018 JV59_35005 ddbdc05bbdc02cdf800fe5394b59d73e 924 Gene3D G3DSA:3.30.830.10 469 851 7.3E-106 T 14-10-2018 JV59_35005 ddbdc05bbdc02cdf800fe5394b59d73e 924 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 JV59_35005 ddbdc05bbdc02cdf800fe5394b59d73e 924 Gene3D G3DSA:3.30.830.10 1 228 2.0E-87 T 14-10-2018 JV59_35005 ddbdc05bbdc02cdf800fe5394b59d73e 924 Pfam PF05193 Peptidase M16 inactive domain 182 354 5.8E-22 T 14-10-2018 IPR007863 Peptidase M16, C-terminal JV59_35005 ddbdc05bbdc02cdf800fe5394b59d73e 924 Pfam PF05193 Peptidase M16 inactive domain 647 823 2.2E-9 T 14-10-2018 IPR007863 Peptidase M16, C-terminal JV59_35005 ddbdc05bbdc02cdf800fe5394b59d73e 924 SUPERFAMILY SSF63411 233 459 1.28E-73 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JV59_35005 ddbdc05bbdc02cdf800fe5394b59d73e 924 Gene3D G3DSA:3.30.830.10 617 876 7.3E-106 T 14-10-2018 JV59_35005 ddbdc05bbdc02cdf800fe5394b59d73e 924 SUPERFAMILY SSF63411 702 901 3.49E-44 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JV59_35005 ddbdc05bbdc02cdf800fe5394b59d73e 924 Pfam PF00675 Insulinase (Peptidase family M16) 21 158 4.9E-38 T 14-10-2018 IPR011765 Peptidase M16, N-terminal JV59_35005 ddbdc05bbdc02cdf800fe5394b59d73e 924 SUPERFAMILY SSF63411 469 693 8.67E-61 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JV59_35005 ddbdc05bbdc02cdf800fe5394b59d73e 924 SUPERFAMILY SSF63411 4 226 7.52E-61 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JV59_38080 c7aa8fabfabd2d370c9a1426f1128dd2 483 Pfam PF10415 Fumarase C C-terminus 421 473 4.8E-18 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 JV59_38080 c7aa8fabfabd2d370c9a1426f1128dd2 483 ProSitePatterns PS00163 Fumarate lyases signature. 330 339 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 JV59_38080 c7aa8fabfabd2d370c9a1426f1128dd2 483 PRINTS PR00149 Fumarate lyase superfamily signature 193 211 3.7E-26 T 14-10-2018 IPR000362 Fumarate lyase family JV59_38080 c7aa8fabfabd2d370c9a1426f1128dd2 483 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 3.7E-26 T 14-10-2018 IPR000362 Fumarate lyase family JV59_38080 c7aa8fabfabd2d370c9a1426f1128dd2 483 PRINTS PR00149 Fumarate lyase superfamily signature 330 346 3.7E-26 T 14-10-2018 IPR000362 Fumarate lyase family JV59_38080 c7aa8fabfabd2d370c9a1426f1128dd2 483 PRINTS PR00149 Fumarate lyase superfamily signature 284 311 3.7E-26 T 14-10-2018 IPR000362 Fumarate lyase family JV59_38080 c7aa8fabfabd2d370c9a1426f1128dd2 483 Gene3D G3DSA:1.20.200.10 153 420 1.6E-112 T 14-10-2018 JV59_38080 c7aa8fabfabd2d370c9a1426f1128dd2 483 Pfam PF00206 Lyase 23 355 1.5E-102 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal JV59_38080 c7aa8fabfabd2d370c9a1426f1128dd2 483 SUPERFAMILY SSF48557 14 468 1.15E-143 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 JV59_38080 c7aa8fabfabd2d370c9a1426f1128dd2 483 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 16 482 1.3E-252 T 14-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 JV59_38080 c7aa8fabfabd2d370c9a1426f1128dd2 483 Gene3D G3DSA:1.10.275.10 16 152 1.0E-58 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal JV59_38080 c7aa8fabfabd2d370c9a1426f1128dd2 483 Gene3D G3DSA:1.10.40.30 421 470 5.0E-29 T 14-10-2018 JV59_34600 a445445697045338fd8029ea472c3825 338 SMART SM00870 5 325 1.6E-142 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 JV59_34600 a445445697045338fd8029ea472c3825 338 Gene3D G3DSA:3.40.50.1170 1 210 4.7E-93 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 JV59_34600 a445445697045338fd8029ea472c3825 338 Gene3D G3DSA:3.40.50.40 211 338 2.8E-45 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 JV59_34600 a445445697045338fd8029ea472c3825 338 SUPERFAMILY SSF53774 3 337 4.84E-113 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 JV59_34600 a445445697045338fd8029ea472c3825 338 PIRSF PIRSF500176 2 334 5.4E-109 T 14-10-2018 JV59_34600 a445445697045338fd8029ea472c3825 338 PIRSF PIRSF001220 1 336 3.6E-96 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 JV59_34600 a445445697045338fd8029ea472c3825 338 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 14-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 JV59_34600 a445445697045338fd8029ea472c3825 338 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 85 95 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 JV59_34600 a445445697045338fd8029ea472c3825 338 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 336 4.5E-117 T 14-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 JV59_34600 a445445697045338fd8029ea472c3825 338 Pfam PF00710 Asparaginase, N-terminal 5 193 5.3E-68 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 JV59_34600 a445445697045338fd8029ea472c3825 338 PRINTS PR00139 Asparaginase/glutaminase family signature 84 102 8.5E-17 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 JV59_34600 a445445697045338fd8029ea472c3825 338 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 8.5E-17 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 JV59_34600 a445445697045338fd8029ea472c3825 338 PRINTS PR00139 Asparaginase/glutaminase family signature 262 280 8.5E-17 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 JV59_39970 e765c6eee542bde526619abda1864874 842 Pfam PF12633 Adenylate cyclase NT domain 5 198 1.8E-75 T 14-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 JV59_39970 e765c6eee542bde526619abda1864874 842 Pfam PF01295 Adenylate cyclase, class-I 226 828 2.5E-254 T 14-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 JV59_39970 e765c6eee542bde526619abda1864874 842 PIRSF PIRSF001444 1 842 0.0 T 14-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 JV59_38760 bf57e984025ef1362de513dd4bb20dd8 1032 Gene3D G3DSA:2.170.130.10 133 261 6.2E-34 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily JV59_38760 bf57e984025ef1362de513dd4bb20dd8 1032 SMART SM00965 57 108 4.6E-4 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 JV59_38760 bf57e984025ef1362de513dd4bb20dd8 1032 Pfam PF07715 TonB-dependent Receptor Plug Domain 147 234 6.3E-9 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain JV59_38760 bf57e984025ef1362de513dd4bb20dd8 1032 Pfam PF00593 TonB dependent receptor 756 1029 1.3E-31 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel JV59_38760 bf57e984025ef1362de513dd4bb20dd8 1032 Gene3D G3DSA:2.40.170.20 322 638 7.1E-40 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily JV59_38760 bf57e984025ef1362de513dd4bb20dd8 1032 Gene3D G3DSA:2.40.170.20 714 1032 6.1E-51 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily JV59_38760 bf57e984025ef1362de513dd4bb20dd8 1032 SUPERFAMILY SSF56935 138 1032 1.07E-61 T 14-10-2018 JV59_38760 bf57e984025ef1362de513dd4bb20dd8 1032 Gene3D G3DSA:3.55.50.30 35 106 4.1E-22 T 14-10-2018 JV59_20485 c2041933d4739114067093f5aae10e29 210 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 184 5.8E-29 T 14-10-2018 JV59_20485 c2041933d4739114067093f5aae10e29 210 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 3 185 6.6E-64 T 14-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase JV59_20485 c2041933d4739114067093f5aae10e29 210 SUPERFAMILY SSF56784 1 204 8.56E-51 T 14-10-2018 IPR036412 HAD-like superfamily JV59_20485 c2041933d4739114067093f5aae10e29 210 Gene3D G3DSA:1.10.150.240 15 89 9.6E-67 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JV59_20485 c2041933d4739114067093f5aae10e29 210 Gene3D G3DSA:3.40.50.1000 3 199 9.6E-67 T 14-10-2018 IPR023214 HAD superfamily JV59_20485 c2041933d4739114067093f5aae10e29 210 TIGRFAM TIGR01990 bPGM: beta-phosphoglucomutase 3 186 1.4E-75 T 14-10-2018 IPR010972 Beta-phosphoglucomutase GO:0000287|GO:0005975|GO:0008801 KEGG: 00500+5.4.2.6|MetaCyc: PWY-2721|MetaCyc: PWY-2722|MetaCyc: PWY-7459 JV59_20485 c2041933d4739114067093f5aae10e29 210 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 5 185 1.9E-19 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_21120 4a837810618d833c8f091e6b067a9c64 372 Gene3D G3DSA:4.10.1250.10 233 281 5.8E-20 T 14-10-2018 JV59_21120 4a837810618d833c8f091e6b067a9c64 372 Gene3D G3DSA:2.40.30.110 284 361 4.0E-28 T 14-10-2018 JV59_21120 4a837810618d833c8f091e6b067a9c64 372 Gene3D G3DSA:3.30.1360.120 7 231 9.1E-85 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 JV59_21120 4a837810618d833c8f091e6b067a9c64 372 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 268 362 1.2E-21 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 JV59_21120 4a837810618d833c8f091e6b067a9c64 372 SUPERFAMILY SSF101790 279 371 1.03E-25 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal JV59_21120 4a837810618d833c8f091e6b067a9c64 372 PIRSF PIRSF006487 1 372 2.2E-81 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 JV59_21120 4a837810618d833c8f091e6b067a9c64 372 Gene3D G3DSA:3.30.70.1400 56 139 9.1E-85 T 14-10-2018 JV59_21120 4a837810618d833c8f091e6b067a9c64 372 SUPERFAMILY SSF103025 4 281 1.57E-89 T 14-10-2018 JV59_21120 4a837810618d833c8f091e6b067a9c64 372 Pfam PF01571 Aminomethyltransferase folate-binding domain 10 254 3.6E-88 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain JV59_21120 4a837810618d833c8f091e6b067a9c64 372 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 6 366 5.4E-106 T 14-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 JV59_02525 16af06668ecd5dd91cd52a2332cbfb3e 1159 Pfam PF02811 PHP domain 8 172 3.6E-41 T 14-10-2018 IPR004013 PHP domain GO:0003824 JV59_02525 16af06668ecd5dd91cd52a2332cbfb3e 1159 Gene3D G3DSA:3.20.20.140 1 270 2.3E-89 T 14-10-2018 JV59_02525 16af06668ecd5dd91cd52a2332cbfb3e 1159 SMART SM00481 7 74 5.7E-24 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal JV59_02525 16af06668ecd5dd91cd52a2332cbfb3e 1159 Gene3D G3DSA:1.10.10.1600 433 510 2.5E-32 T 14-10-2018 JV59_02525 16af06668ecd5dd91cd52a2332cbfb3e 1159 Pfam PF01336 OB-fold nucleic acid binding domain 993 1071 7.8E-11 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 JV59_02525 16af06668ecd5dd91cd52a2332cbfb3e 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 291 735 3.8E-175 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_02525 16af06668ecd5dd91cd52a2332cbfb3e 1159 SUPERFAMILY SSF50249 976 1064 8.57E-6 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_02525 16af06668ecd5dd91cd52a2332cbfb3e 1159 Pfam PF14579 Helix-hairpin-helix motif 809 897 2.1E-26 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_02525 16af06668ecd5dd91cd52a2332cbfb3e 1159 Gene3D G3DSA:2.40.50.140 984 1072 4.9E-9 T 14-10-2018 JV59_02525 16af06668ecd5dd91cd52a2332cbfb3e 1159 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1030 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_02525 16af06668ecd5dd91cd52a2332cbfb3e 1159 SUPERFAMILY SSF89550 5 263 4.32E-12 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 JV59_36900 5ab643a4e8e920e3c88d7f472f78a18a 546 SUPERFAMILY SSF52540 3 269 1.8E-121 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_36900 5ab643a4e8e920e3c88d7f472f78a18a 546 Gene3D G3DSA:3.40.50.880 286 543 1.6E-105 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_36900 5ab643a4e8e920e3c88d7f472f78a18a 546 Pfam PF00117 Glutamine amidotransferase class-I 301 535 2.2E-63 T 14-10-2018 IPR017926 Glutamine amidotransferase JV59_36900 5ab643a4e8e920e3c88d7f472f78a18a 546 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.367 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 JV59_36900 5ab643a4e8e920e3c88d7f472f78a18a 546 Pfam PF06418 CTP synthase N-terminus 5 265 5.1E-125 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 JV59_36900 5ab643a4e8e920e3c88d7f472f78a18a 546 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 6.7E-261 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 JV59_36900 5ab643a4e8e920e3c88d7f472f78a18a 546 Gene3D G3DSA:3.40.50.300 1 285 1.9E-133 T 14-10-2018 JV59_36900 5ab643a4e8e920e3c88d7f472f78a18a 546 SUPERFAMILY SSF52317 289 539 2.14E-87 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_25005 6957907e49408972cca101dd7b433927 503 Gene3D G3DSA:3.30.70.360 250 391 1.8E-12 T 14-10-2018 JV59_25005 6957907e49408972cca101dd7b433927 503 Gene3D G3DSA:3.40.630.10 42 249 1.4E-43 T 14-10-2018 JV59_25005 6957907e49408972cca101dd7b433927 503 SUPERFAMILY SSF55031 248 392 1.15E-9 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain JV59_25005 6957907e49408972cca101dd7b433927 503 Pfam PF07687 Peptidase dimerisation domain 244 389 1.2E-16 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain JV59_25005 6957907e49408972cca101dd7b433927 503 SUPERFAMILY SSF53187 47 493 6.29E-47 T 14-10-2018 JV59_25005 6957907e49408972cca101dd7b433927 503 Pfam PF01546 Peptidase family M20/M25/M40 123 491 5.0E-31 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 JV59_37010 ac7424d84946f638303fac15e916add4 408 Gene3D G3DSA:3.30.9.50 80 270 6.1E-121 T 14-10-2018 JV59_37010 ac7424d84946f638303fac15e916add4 408 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 JV59_37010 ac7424d84946f638303fac15e916add4 408 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 1.2E-134 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 JV59_37010 ac7424d84946f638303fac15e916add4 408 Gene3D G3DSA:3.50.50.60 6 339 6.1E-121 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_37010 ac7424d84946f638303fac15e916add4 408 Pfam PF01494 FAD binding domain 5 347 8.7E-30 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 JV59_37010 ac7424d84946f638303fac15e916add4 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 6.8E-19 T 14-10-2018 JV59_37010 ac7424d84946f638303fac15e916add4 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 6.8E-19 T 14-10-2018 JV59_37010 ac7424d84946f638303fac15e916add4 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 6.8E-19 T 14-10-2018 JV59_37010 ac7424d84946f638303fac15e916add4 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 6.8E-19 T 14-10-2018 JV59_37010 ac7424d84946f638303fac15e916add4 408 SUPERFAMILY SSF51905 5 385 6.33E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_01280 4707f94484ab8a3ed3be012ffb300d45 617 Gene3D G3DSA:1.10.601.10 113 452 1.3E-137 T 14-10-2018 JV59_01280 4707f94484ab8a3ed3be012ffb300d45 617 SUPERFAMILY SSF88946 115 450 9.03E-97 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JV59_01280 4707f94484ab8a3ed3be012ffb300d45 617 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 407 420 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_01280 4707f94484ab8a3ed3be012ffb300d45 617 Gene3D G3DSA:1.10.10.10 456 532 2.6E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_01280 4707f94484ab8a3ed3be012ffb300d45 617 Pfam PF04542 Sigma-70 region 2 383 452 1.7E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JV59_01280 4707f94484ab8a3ed3be012ffb300d45 617 Gene3D G3DSA:1.10.220.120 1 64 6.5E-30 T 14-10-2018 JV59_01280 4707f94484ab8a3ed3be012ffb300d45 617 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 379 604 6.8E-37 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JV59_01280 4707f94484ab8a3ed3be012ffb300d45 617 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 379 615 1.4E-120 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 JV59_01280 4707f94484ab8a3ed3be012ffb300d45 617 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 576 602 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_01280 4707f94484ab8a3ed3be012ffb300d45 617 Pfam PF04546 Sigma-70, non-essential region 139 352 1.7E-63 T 14-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JV59_01280 4707f94484ab8a3ed3be012ffb300d45 617 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.8E-12 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JV59_01280 4707f94484ab8a3ed3be012ffb300d45 617 SUPERFAMILY SSF88659 513 615 1.92E-25 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JV59_01280 4707f94484ab8a3ed3be012ffb300d45 617 Pfam PF04539 Sigma-70 region 3 462 537 1.3E-28 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 JV59_01280 4707f94484ab8a3ed3be012ffb300d45 617 PRINTS PR00046 Major sigma-70 factor signature 576 591 3.1E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_01280 4707f94484ab8a3ed3be012ffb300d45 617 PRINTS PR00046 Major sigma-70 factor signature 591 602 3.1E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_01280 4707f94484ab8a3ed3be012ffb300d45 617 PRINTS PR00046 Major sigma-70 factor signature 555 567 3.1E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_01280 4707f94484ab8a3ed3be012ffb300d45 617 PRINTS PR00046 Major sigma-70 factor signature 407 420 3.1E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_01280 4707f94484ab8a3ed3be012ffb300d45 617 PRINTS PR00046 Major sigma-70 factor signature 431 439 3.1E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_01280 4707f94484ab8a3ed3be012ffb300d45 617 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 1.0E-28 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 JV59_01280 4707f94484ab8a3ed3be012ffb300d45 617 Gene3D G3DSA:1.10.10.10 533 617 1.1E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_01280 4707f94484ab8a3ed3be012ffb300d45 617 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 616 46.065 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 JV59_01280 4707f94484ab8a3ed3be012ffb300d45 617 Pfam PF04545 Sigma-70, region 4 551 604 1.8E-19 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 JV59_01280 4707f94484ab8a3ed3be012ffb300d45 617 SUPERFAMILY SSF88659 456 529 2.2E-20 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JV59_37870 580cdffbfc77cf4dc978ab7b0d9205e9 63 SUPERFAMILY SSF46561 1 61 2.09E-23 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37870 580cdffbfc77cf4dc978ab7b0d9205e9 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 14-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37870 580cdffbfc77cf4dc978ab7b0d9205e9 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.306 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37870 580cdffbfc77cf4dc978ab7b0d9205e9 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 7.4E-24 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37870 580cdffbfc77cf4dc978ab7b0d9205e9 63 Gene3D G3DSA:1.10.287.310 1 63 1.6E-31 T 14-10-2018 JV59_37870 580cdffbfc77cf4dc978ab7b0d9205e9 63 Pfam PF00831 Ribosomal L29 protein 4 60 1.8E-25 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_36670 b6d108a2c6e5dc151e6c30ca366d6e16 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 2.0E-35 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_36670 b6d108a2c6e5dc151e6c30ca366d6e16 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 1.3E-31 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_36670 b6d108a2c6e5dc151e6c30ca366d6e16 86 SUPERFAMILY SSF46992 3 86 1.11E-32 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_36670 b6d108a2c6e5dc151e6c30ca366d6e16 86 Pfam PF01649 Ribosomal protein S20 2 84 6.4E-28 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_36670 b6d108a2c6e5dc151e6c30ca366d6e16 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.679 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_36670 b6d108a2c6e5dc151e6c30ca366d6e16 86 Gene3D G3DSA:1.20.58.110 1 86 4.2E-30 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_34960 773fa2dbc398b41531418d6af3bea483 376 Pfam PF00072 Response regulator receiver domain 5 109 1.5E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_34960 773fa2dbc398b41531418d6af3bea483 376 PIRSF PIRSF000876 1 374 1.2E-128 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 JV59_34960 773fa2dbc398b41531418d6af3bea483 376 SMART SM00448 3 126 4.6E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_34960 773fa2dbc398b41531418d6af3bea483 376 SUPERFAMILY SSF52738 185 370 1.31E-62 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal JV59_34960 773fa2dbc398b41531418d6af3bea483 376 SUPERFAMILY SSF52172 2 109 1.41E-26 T 14-10-2018 IPR011006 CheY-like superfamily JV59_34960 773fa2dbc398b41531418d6af3bea483 376 Pfam PF01339 CheB methylesterase 191 369 2.4E-58 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 JV59_34960 773fa2dbc398b41531418d6af3bea483 376 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 374 38.859 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 JV59_34960 773fa2dbc398b41531418d6af3bea483 376 Gene3D G3DSA:3.40.50.180 183 372 1.9E-64 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal JV59_34960 773fa2dbc398b41531418d6af3bea483 376 Gene3D G3DSA:3.40.50.2300 2 129 8.5E-31 T 14-10-2018 JV59_39275 cd165e22f5678b704aead68c88808aea 453 SUPERFAMILY SSF52540 71 371 1.35E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_39275 cd165e22f5678b704aead68c88808aea 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 453 32.819 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 JV59_39275 cd165e22f5678b704aead68c88808aea 453 Pfam PF12631 MnmE helical domain 122 450 3.4E-61 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 JV59_39275 cd165e22f5678b704aead68c88808aea 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 2.0E-35 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 JV59_39275 cd165e22f5678b704aead68c88808aea 453 Gene3D G3DSA:3.30.1360.120 1 120 6.2E-39 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 JV59_39275 cd165e22f5678b704aead68c88808aea 453 SUPERFAMILY SSF116878 120 453 3.01E-52 T 14-10-2018 JV59_39275 cd165e22f5678b704aead68c88808aea 453 Pfam PF01926 50S ribosome-binding GTPase 217 306 2.5E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JV59_39275 cd165e22f5678b704aead68c88808aea 453 Gene3D G3DSA:1.20.120.430 121 453 1.8E-103 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 JV59_39275 cd165e22f5678b704aead68c88808aea 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 368 2.7E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JV59_39275 cd165e22f5678b704aead68c88808aea 453 Gene3D G3DSA:3.40.50.300 216 381 1.8E-103 T 14-10-2018 JV59_39275 cd165e22f5678b704aead68c88808aea 453 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 453 1.6E-100 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 JV59_33795 1cd887fee1052577b554be2fd32fdfd8 644 SUPERFAMILY SSF52540 73 368 2.0E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_33795 1cd887fee1052577b554be2fd32fdfd8 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 4.9E-73 T 14-10-2018 IPR010650 PrkA C-terminal domain JV59_33795 1cd887fee1052577b554be2fd32fdfd8 644 SMART SM00763 19 380 6.7E-215 T 14-10-2018 IPR013153 PrkA AAA domain JV59_33795 1cd887fee1052577b554be2fd32fdfd8 644 Pfam PF08298 PrkA AAA domain 20 380 2.3E-173 T 14-10-2018 IPR013153 PrkA AAA domain JV59_33795 1cd887fee1052577b554be2fd32fdfd8 644 PIRSF PIRSF000549 1 644 1.3E-286 T 14-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 JV59_18765 73f6addd793c861bc9a814d05f2bf918 411 Pfam PF00994 Probable molybdopterin binding domain 186 320 2.5E-25 T 14-10-2018 IPR001453 MoaB/Mog domain JV59_18765 73f6addd793c861bc9a814d05f2bf918 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 JV59_18765 73f6addd793c861bc9a814d05f2bf918 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 171 5.2E-46 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JV59_18765 73f6addd793c861bc9a814d05f2bf918 411 Gene3D G3DSA:3.40.980.10 179 331 1.0E-145 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily JV59_18765 73f6addd793c861bc9a814d05f2bf918 411 SUPERFAMILY SSF63882 9 180 3.4E-55 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JV59_18765 73f6addd793c861bc9a814d05f2bf918 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 317 1.4E-32 T 14-10-2018 IPR001453 MoaB/Mog domain JV59_18765 73f6addd793c861bc9a814d05f2bf918 411 SMART SM00852 184 321 1.8E-42 T 14-10-2018 IPR001453 MoaB/Mog domain JV59_18765 73f6addd793c861bc9a814d05f2bf918 411 Gene3D G3DSA:3.90.105.10 31 178 1.0E-145 T 14-10-2018 JV59_18765 73f6addd793c861bc9a814d05f2bf918 411 SUPERFAMILY SSF63867 332 410 2.88E-23 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JV59_18765 73f6addd793c861bc9a814d05f2bf918 411 SUPERFAMILY SSF53218 181 327 5.1E-42 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily JV59_18765 73f6addd793c861bc9a814d05f2bf918 411 Pfam PF03454 MoeA C-terminal region (domain IV) 336 406 3.5E-21 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JV59_18765 73f6addd793c861bc9a814d05f2bf918 411 Gene3D G3DSA:2.170.190.11 53 145 1.0E-145 T 14-10-2018 JV59_18765 73f6addd793c861bc9a814d05f2bf918 411 Gene3D G3DSA:2.40.340.10 332 401 1.0E-145 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JV59_39180 60b5730f985d7bc32e687aedfeae6e86 313 Gene3D G3DSA:1.10.10.10 3 91 3.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_39180 60b5730f985d7bc32e687aedfeae6e86 313 Pfam PF03466 LysR substrate binding domain 96 299 1.5E-20 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_39180 60b5730f985d7bc32e687aedfeae6e86 313 Gene3D G3DSA:3.40.190.10 93 296 1.6E-66 T 14-10-2018 JV59_39180 60b5730f985d7bc32e687aedfeae6e86 313 SUPERFAMILY SSF53850 94 298 2.71E-37 T 14-10-2018 JV59_39180 60b5730f985d7bc32e687aedfeae6e86 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 3.5E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_39180 60b5730f985d7bc32e687aedfeae6e86 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 9.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_39180 60b5730f985d7bc32e687aedfeae6e86 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 9.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_39180 60b5730f985d7bc32e687aedfeae6e86 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 9.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_39180 60b5730f985d7bc32e687aedfeae6e86 313 SUPERFAMILY SSF46785 7 88 2.47E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_39180 60b5730f985d7bc32e687aedfeae6e86 313 Gene3D G3DSA:3.40.190.10 172 271 1.6E-66 T 14-10-2018 JV59_33230 df21e4d02893193c74783aa5a520935f 521 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 518 6.8E-227 T 14-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 JV59_33230 df21e4d02893193c74783aa5a520935f 521 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 196 3.4E-14 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 JV59_33230 df21e4d02893193c74783aa5a520935f 521 PIRSF PIRSF001373 3 521 7.2E-260 T 14-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 JV59_33230 df21e4d02893193c74783aa5a520935f 521 SUPERFAMILY SSF56322 14 515 3.27E-157 T 14-10-2018 IPR005801 ADC synthase GO:0009058 JV59_33230 df21e4d02893193c74783aa5a520935f 521 Pfam PF00425 chorismate binding enzyme 246 506 2.9E-84 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal JV59_33230 df21e4d02893193c74783aa5a520935f 521 PRINTS PR00095 Anthranilate synthase component I signature 448 462 1.3E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 JV59_33230 df21e4d02893193c74783aa5a520935f 521 PRINTS PR00095 Anthranilate synthase component I signature 354 367 1.3E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 JV59_33230 df21e4d02893193c74783aa5a520935f 521 PRINTS PR00095 Anthranilate synthase component I signature 368 381 1.3E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 JV59_33230 df21e4d02893193c74783aa5a520935f 521 PRINTS PR00095 Anthranilate synthase component I signature 463 477 1.3E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 JV59_33230 df21e4d02893193c74783aa5a520935f 521 Gene3D G3DSA:3.60.120.10 8 521 9.5E-186 T 14-10-2018 IPR005801 ADC synthase GO:0009058 JV59_24195 4d5c3afb5a8b8681466c17637f8e0db3 471 PRINTS PR00147 DNA photolyase signature 324 340 3.7E-27 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 JV59_24195 4d5c3afb5a8b8681466c17637f8e0db3 471 PRINTS PR00147 DNA photolyase signature 344 362 3.7E-27 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 JV59_24195 4d5c3afb5a8b8681466c17637f8e0db3 471 PRINTS PR00147 DNA photolyase signature 142 158 3.7E-27 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 JV59_24195 4d5c3afb5a8b8681466c17637f8e0db3 471 PRINTS PR00147 DNA photolyase signature 383 397 3.7E-27 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 JV59_24195 4d5c3afb5a8b8681466c17637f8e0db3 471 Pfam PF00875 DNA photolyase 3 162 1.7E-41 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 JV59_24195 4d5c3afb5a8b8681466c17637f8e0db3 471 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 344 363 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal JV59_24195 4d5c3afb5a8b8681466c17637f8e0db3 471 SUPERFAMILY SSF52425 2 175 2.88E-42 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 JV59_24195 4d5c3afb5a8b8681466c17637f8e0db3 471 Gene3D G3DSA:1.25.40.80 133 285 1.3E-69 T 14-10-2018 JV59_24195 4d5c3afb5a8b8681466c17637f8e0db3 471 SUPERFAMILY SSF48173 192 470 1.24E-102 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 JV59_24195 4d5c3afb5a8b8681466c17637f8e0db3 471 Gene3D G3DSA:3.40.50.620 3 204 1.3E-69 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_24195 4d5c3afb5a8b8681466c17637f8e0db3 471 Pfam PF03441 FAD binding domain of DNA photolyase 274 466 1.2E-80 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 JV59_24195 4d5c3afb5a8b8681466c17637f8e0db3 471 Gene3D G3DSA:1.10.579.10 292 471 7.0E-80 T 14-10-2018 JV59_23035 0d20272bc6a11686d1d1f6aafce761a6 205 Gene3D G3DSA:3.90.79.10 41 205 4.9E-39 T 14-10-2018 JV59_23035 0d20272bc6a11686d1d1f6aafce761a6 205 Pfam PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal 3 57 2.6E-24 T 14-10-2018 JV59_23035 0d20272bc6a11686d1d1f6aafce761a6 205 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JV59_23035 0d20272bc6a11686d1d1f6aafce761a6 205 SUPERFAMILY SSF55811 59 198 1.76E-27 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JV59_23035 0d20272bc6a11686d1d1f6aafce761a6 205 Pfam PF00293 NUDIX domain 76 177 1.7E-11 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JV59_28840 fb868935e55897533ef5d34f029929bb 227 SUPERFAMILY SSF52540 1 212 2.56E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_28840 fb868935e55897533ef5d34f029929bb 227 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 218 29.7 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 JV59_28840 fb868935e55897533ef5d34f029929bb 227 Gene3D G3DSA:3.40.50.300 3 224 5.8E-68 T 14-10-2018 JV59_28840 fb868935e55897533ef5d34f029929bb 227 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 9.5E-55 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 JV59_28840 fb868935e55897533ef5d34f029929bb 227 PIRSF PIRSF006755 1 226 1.1E-78 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 JV59_28840 fb868935e55897533ef5d34f029929bb 227 Pfam PF13500 AAA domain 4 212 5.7E-39 T 14-10-2018 JV59_26515 f4f79099d6e0c86efd2b6eaac69f3840 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 30.981 T 14-10-2018 IPR023065 Uncharacterised protein family ApaG JV59_26515 f4f79099d6e0c86efd2b6eaac69f3840 125 Pfam PF04379 ApaG domain 18 100 8.0E-32 T 14-10-2018 IPR007474 ApaG domain JV59_26515 f4f79099d6e0c86efd2b6eaac69f3840 125 SUPERFAMILY SSF110069 4 125 1.11E-45 T 14-10-2018 IPR036767 ApaG domain superfamily JV59_26515 f4f79099d6e0c86efd2b6eaac69f3840 125 Gene3D G3DSA:2.60.40.1470 2 125 3.5E-45 T 14-10-2018 IPR036767 ApaG domain superfamily JV59_29900 f4e5d668a3397422cf445db93fa1eb72 321 Gene3D G3DSA:1.10.150.130 4 95 1.3E-28 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal JV59_29900 f4e5d668a3397422cf445db93fa1eb72 321 SUPERFAMILY SSF56349 101 317 6.18E-45 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JV59_29900 f4e5d668a3397422cf445db93fa1eb72 321 TIGRFAM TIGR02249 integrase_gron: integron integrase 7 320 2.1E-118 T 14-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 JV59_29900 f4e5d668a3397422cf445db93fa1eb72 321 Pfam PF00589 Phage integrase family 106 305 1.8E-43 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JV59_29900 f4e5d668a3397422cf445db93fa1eb72 321 Gene3D G3DSA:1.10.443.10 97 309 4.1E-57 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JV59_29900 f4e5d668a3397422cf445db93fa1eb72 321 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 8 90 1.1E-23 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 JV59_16210 8baabf9b72ddd37718e2f1381b97d1a2 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 115 1.5E-4 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JV59_16210 8baabf9b72ddd37718e2f1381b97d1a2 126 SUPERFAMILY SSF54593 5 125 6.19E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_16210 8baabf9b72ddd37718e2f1381b97d1a2 126 Gene3D G3DSA:3.10.180.10 6 125 3.9E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_16490 e3004573f425050a365992c35a10c86f 166 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 95 123 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 JV59_16490 e3004573f425050a365992c35a10c86f 166 Gene3D G3DSA:2.160.10.10 23 158 5.0E-26 T 14-10-2018 JV59_16490 e3004573f425050a365992c35a10c86f 166 PIRSF PIRSF000441 2 161 3.3E-36 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 JV59_16490 e3004573f425050a365992c35a10c86f 166 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 121 1.4E-9 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_16490 e3004573f425050a365992c35a10c86f 166 SUPERFAMILY SSF51161 4 145 3.19E-31 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JV59_38550 f7ac3491643326bc049aca4b94857707 282 Gene3D G3DSA:3.20.20.100 1 267 2.1E-33 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily JV59_38550 f7ac3491643326bc049aca4b94857707 282 PRINTS PR00069 Aldo-keto reductase signature 86 104 4.8E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JV59_38550 f7ac3491643326bc049aca4b94857707 282 PRINTS PR00069 Aldo-keto reductase signature 35 59 4.8E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JV59_38550 f7ac3491643326bc049aca4b94857707 282 PRINTS PR00069 Aldo-keto reductase signature 118 135 4.8E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JV59_38550 f7ac3491643326bc049aca4b94857707 282 Pfam PF00248 Aldo/keto reductase family 3 263 6.0E-27 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain JV59_38550 f7ac3491643326bc049aca4b94857707 282 SUPERFAMILY SSF51430 3 262 3.4E-38 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily JV59_23235 a2de75ff1c4c9340e22e8039127bdbff 194 Gene3D G3DSA:1.10.10.60 1 65 2.2E-21 T 14-10-2018 JV59_23235 a2de75ff1c4c9340e22e8039127bdbff 194 Pfam PF16925 Bacterial transcriptional repressor C-terminal 79 186 1.2E-6 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JV59_23235 a2de75ff1c4c9340e22e8039127bdbff 194 SUPERFAMILY SSF46689 7 82 7.7E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_23235 a2de75ff1c4c9340e22e8039127bdbff 194 SUPERFAMILY SSF48498 78 190 7.19E-22 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JV59_23235 a2de75ff1c4c9340e22e8039127bdbff 194 Gene3D G3DSA:1.10.357.10 67 193 1.8E-18 T 14-10-2018 JV59_23235 a2de75ff1c4c9340e22e8039127bdbff 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 4.7E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_25840 21905663e6de07c2215ae4dfba1ab630 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 9.5E-25 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_25840 21905663e6de07c2215ae4dfba1ab630 298 SUPERFAMILY SSF46785 1 85 2.12E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_25840 21905663e6de07c2215ae4dfba1ab630 298 Gene3D G3DSA:3.40.190.10 94 285 3.9E-42 T 14-10-2018 JV59_25840 21905663e6de07c2215ae4dfba1ab630 298 SUPERFAMILY SSF53850 89 288 9.15E-35 T 14-10-2018 JV59_25840 21905663e6de07c2215ae4dfba1ab630 298 Pfam PF03466 LysR substrate binding domain 87 287 2.0E-37 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_25840 21905663e6de07c2215ae4dfba1ab630 298 Gene3D G3DSA:3.40.190.10 165 269 3.9E-42 T 14-10-2018 JV59_25840 21905663e6de07c2215ae4dfba1ab630 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.7E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_25840 21905663e6de07c2215ae4dfba1ab630 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.7E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_25840 21905663e6de07c2215ae4dfba1ab630 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.7E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_25840 21905663e6de07c2215ae4dfba1ab630 298 Gene3D G3DSA:1.10.10.10 1 93 6.1E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_25245 fa594af26e63950e5903ad781dc40fd0 412 SUPERFAMILY SSF53383 10 397 1.88E-90 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_25245 fa594af26e63950e5903ad781dc40fd0 412 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 209 228 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site JV59_25245 fa594af26e63950e5903ad781dc40fd0 412 Pfam PF00266 Aminotransferase class-V 25 390 8.8E-99 T 14-10-2018 IPR000192 Aminotransferase class V domain JV59_25245 fa594af26e63950e5903ad781dc40fd0 412 Gene3D G3DSA:3.90.1150.10 11 393 3.1E-115 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_25245 fa594af26e63950e5903ad781dc40fd0 412 Gene3D G3DSA:3.40.640.10 36 288 3.1E-115 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_31825 860e3ed18448c4db2751d48c4b3582da 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 50.673 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 JV59_31825 860e3ed18448c4db2751d48c4b3582da 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 5.8E-83 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 JV59_31825 860e3ed18448c4db2751d48c4b3582da 231 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 4.4E-85 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 JV59_31825 860e3ed18448c4db2751d48c4b3582da 231 Gene3D G3DSA:3.40.50.620 1 230 6.8E-79 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_31825 860e3ed18448c4db2751d48c4b3582da 231 SUPERFAMILY SSF52402 1 212 4.85E-67 T 14-10-2018 JV59_31825 860e3ed18448c4db2751d48c4b3582da 231 PIRSF PIRSF006293 1 224 2.9E-83 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 JV59_23580 74542708ca07775b2a8def4f6bec77d8 128 SUPERFAMILY SSF161084 2 126 2.88E-31 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily JV59_23580 74542708ca07775b2a8def4f6bec77d8 128 Pfam PF01124 MAPEG family 3 119 3.3E-27 T 14-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein JV59_23580 74542708ca07775b2a8def4f6bec77d8 128 Gene3D G3DSA:1.20.120.550 1 125 1.6E-26 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily JV59_21780 fac18eedd3793b579924a54bc44c6d50 154 ProSitePatterns PS00194 Thioredoxin family active site. 43 61 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 JV59_21780 fac18eedd3793b579924a54bc44c6d50 154 Gene3D G3DSA:3.40.30.10 14 149 2.5E-23 T 14-10-2018 JV59_21780 fac18eedd3793b579924a54bc44c6d50 154 Pfam PF00578 AhpC/TSA family 38 124 2.6E-13 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JV59_21780 fac18eedd3793b579924a54bc44c6d50 154 SUPERFAMILY SSF52833 6 138 1.74E-26 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_20575 2f23c0f23ad7d6697370b19affca659b 156 Gene3D G3DSA:3.30.300.20 1 155 2.3E-53 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JV59_20575 2f23c0f23ad7d6697370b19affca659b 156 Pfam PF02566 OsmC-like protein 55 152 1.3E-16 T 14-10-2018 IPR003718 OsmC/Ohr family JV59_20575 2f23c0f23ad7d6697370b19affca659b 156 SUPERFAMILY SSF82784 1 153 4.45E-50 T 14-10-2018 IPR036102 OsmC/Ohr superfamily JV59_22150 ae0e672159fe973f67228a8bccdf4c98 294 Pfam PF03466 LysR substrate binding domain 89 287 6.9E-44 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_22150 ae0e672159fe973f67228a8bccdf4c98 294 SUPERFAMILY SSF53850 89 293 1.63E-46 T 14-10-2018 JV59_22150 ae0e672159fe973f67228a8bccdf4c98 294 Gene3D G3DSA:3.40.190.290 91 290 1.1E-63 T 14-10-2018 JV59_22150 ae0e672159fe973f67228a8bccdf4c98 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 1.3E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_22150 ae0e672159fe973f67228a8bccdf4c98 294 Gene3D G3DSA:1.10.10.10 3 89 1.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_22150 ae0e672159fe973f67228a8bccdf4c98 294 SUPERFAMILY SSF46785 6 111 8.52E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_33625 e5a78d4dd715079dbb4fd17d48e16023 195 Pfam PF04994 TfoX C-terminal domain 114 192 2.1E-26 T 14-10-2018 IPR007077 TfoX, C-terminal JV59_33625 e5a78d4dd715079dbb4fd17d48e16023 195 Gene3D G3DSA:1.10.150.20 113 194 8.6E-16 T 14-10-2018 JV59_33625 e5a78d4dd715079dbb4fd17d48e16023 195 Gene3D G3DSA:3.30.1460.30 3 102 2.8E-17 T 14-10-2018 JV59_33625 e5a78d4dd715079dbb4fd17d48e16023 195 PIRSF PIRSF028788 2 194 1.3E-34 T 14-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type JV59_33625 e5a78d4dd715079dbb4fd17d48e16023 195 Pfam PF04993 TfoX N-terminal domain 11 101 3.8E-21 T 14-10-2018 IPR007076 TfoX, N-terminal JV59_33625 e5a78d4dd715079dbb4fd17d48e16023 195 SUPERFAMILY SSF159894 3 102 9.68E-27 T 14-10-2018 JV59_17645 71712eb639a92643709d9bd7696d2964 313 Pfam PF03466 LysR substrate binding domain 105 300 8.5E-22 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_17645 71712eb639a92643709d9bd7696d2964 313 SUPERFAMILY SSF53850 105 302 1.21E-27 T 14-10-2018 JV59_17645 71712eb639a92643709d9bd7696d2964 313 SUPERFAMILY SSF46785 13 129 2.16E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_17645 71712eb639a92643709d9bd7696d2964 313 Gene3D G3DSA:1.10.10.10 19 106 2.9E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_17645 71712eb639a92643709d9bd7696d2964 313 Gene3D G3DSA:3.40.190.290 108 302 8.6E-28 T 14-10-2018 JV59_17645 71712eb639a92643709d9bd7696d2964 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 22 79 2.5E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_33235 376119fc6248071fd4a7777d2fe663f8 201 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 188 1.9E-53 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 JV59_33235 376119fc6248071fd4a7777d2fe663f8 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 1.2E-13 T 14-10-2018 JV59_33235 376119fc6248071fd4a7777d2fe663f8 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 1.2E-13 T 14-10-2018 JV59_33235 376119fc6248071fd4a7777d2fe663f8 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 1.2E-13 T 14-10-2018 JV59_33235 376119fc6248071fd4a7777d2fe663f8 201 PRINTS PR00097 Anthranilate synthase component II signature 166 179 1.6E-34 T 14-10-2018 JV59_33235 376119fc6248071fd4a7777d2fe663f8 201 PRINTS PR00097 Anthranilate synthase component II signature 4 18 1.6E-34 T 14-10-2018 JV59_33235 376119fc6248071fd4a7777d2fe663f8 201 PRINTS PR00097 Anthranilate synthase component II signature 52 61 1.6E-34 T 14-10-2018 JV59_33235 376119fc6248071fd4a7777d2fe663f8 201 PRINTS PR00097 Anthranilate synthase component II signature 104 112 1.6E-34 T 14-10-2018 JV59_33235 376119fc6248071fd4a7777d2fe663f8 201 PRINTS PR00097 Anthranilate synthase component II signature 124 136 1.6E-34 T 14-10-2018 JV59_33235 376119fc6248071fd4a7777d2fe663f8 201 PRINTS PR00097 Anthranilate synthase component II signature 79 90 1.6E-34 T 14-10-2018 JV59_33235 376119fc6248071fd4a7777d2fe663f8 201 SUPERFAMILY SSF52317 3 191 1.94E-48 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_33235 376119fc6248071fd4a7777d2fe663f8 201 Gene3D G3DSA:3.40.50.880 1 193 6.0E-59 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_33235 376119fc6248071fd4a7777d2fe663f8 201 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 1.3E-5 T 14-10-2018 JV59_33235 376119fc6248071fd4a7777d2fe663f8 201 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 1.3E-5 T 14-10-2018 JV59_33235 376119fc6248071fd4a7777d2fe663f8 201 Pfam PF00117 Glutamine amidotransferase class-I 6 186 2.3E-46 T 14-10-2018 IPR017926 Glutamine amidotransferase JV59_37325 0f53182435b0b37276163aed3ae98202 320 Gene3D G3DSA:3.40.50.720 99 288 7.8E-112 T 14-10-2018 JV59_37325 0f53182435b0b37276163aed3ae98202 320 SUPERFAMILY SSF51735 103 290 3.87E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_37325 0f53182435b0b37276163aed3ae98202 320 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JV59_37325 0f53182435b0b37276163aed3ae98202 320 SUPERFAMILY SSF52283 4 139 7.94E-33 T 14-10-2018 JV59_37325 0f53182435b0b37276163aed3ae98202 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 289 2.7E-55 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 JV59_37325 0f53182435b0b37276163aed3ae98202 320 Gene3D G3DSA:3.40.50.720 27 317 7.8E-112 T 14-10-2018 JV59_37325 0f53182435b0b37276163aed3ae98202 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JV59_37325 0f53182435b0b37276163aed3ae98202 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 33 320 2.0E-25 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 JV59_34325 faec4bcb305b6472d6f17b4eb3bc7b87 457 Pfam PF00501 AMP-binding enzyme 9 359 1.2E-48 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JV59_34325 faec4bcb305b6472d6f17b4eb3bc7b87 457 Gene3D G3DSA:3.40.50.12780 2 355 1.1E-63 T 14-10-2018 JV59_34325 faec4bcb305b6472d6f17b4eb3bc7b87 457 SUPERFAMILY SSF56801 8 453 3.53E-83 T 14-10-2018 JV59_34325 faec4bcb305b6472d6f17b4eb3bc7b87 457 Gene3D G3DSA:3.30.300.30 356 454 8.9E-15 T 14-10-2018 JV59_34325 faec4bcb305b6472d6f17b4eb3bc7b87 457 ProSitePatterns PS00455 Putative AMP-binding domain signature. 143 154 - T 14-10-2018 IPR020845 AMP-binding, conserved site JV59_34325 faec4bcb305b6472d6f17b4eb3bc7b87 457 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 29 447 1.1E-125 T 14-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 JV59_31020 fdd351078b442c2ad9df28ab2d973f9e 202 Gene3D G3DSA:3.30.70.20 5 180 1.8E-33 T 14-10-2018 JV59_31020 fdd351078b442c2ad9df28ab2d973f9e 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JV59_31020 fdd351078b442c2ad9df28ab2d973f9e 202 Gene3D G3DSA:3.30.70.20 63 120 1.8E-33 T 14-10-2018 JV59_31020 fdd351078b442c2ad9df28ab2d973f9e 202 Pfam PF13247 4Fe-4S dicluster domain 54 125 6.0E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JV59_31020 fdd351078b442c2ad9df28ab2d973f9e 202 SUPERFAMILY SSF54862 1 183 7.01E-48 T 14-10-2018 JV59_39995 4097d795235573f1439bb4ed4b02f03c 234 Pfam PF04340 Protein of unknown function, DUF484 6 223 1.5E-69 T 14-10-2018 IPR007435 Protein of unknown function DUF484 JV59_39995 4097d795235573f1439bb4ed4b02f03c 234 Gene3D G3DSA:3.30.450.40 43 220 3.6E-34 T 14-10-2018 IPR029016 GAF-like domain superfamily JV59_19310 14c18349de22a99854f4dde8f0ff11d3 151 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 32 145 2.1E-48 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB JV59_19310 14c18349de22a99854f4dde8f0ff11d3 151 Gene3D G3DSA:1.10.1130.10 65 132 1.7E-29 T 14-10-2018 JV59_19310 14c18349de22a99854f4dde8f0ff11d3 151 SUPERFAMILY SSF48695 54 149 5.64E-41 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily JV59_19310 14c18349de22a99854f4dde8f0ff11d3 151 PIRSF PIRSF006105 1 151 1.8E-47 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB JV59_20030 3f01e2914b349acf68ceb087adc2c49e 232 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 214 1.2E-21 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_20030 3f01e2914b349acf68ceb087adc2c49e 232 Gene3D G3DSA:3.40.190.10 10 221 1.5E-26 T 14-10-2018 JV59_20030 3f01e2914b349acf68ceb087adc2c49e 232 SUPERFAMILY SSF53850 20 216 4.6E-34 T 14-10-2018 JV59_20030 3f01e2914b349acf68ceb087adc2c49e 232 SMART SM00062 15 226 0.0034 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_20030 3f01e2914b349acf68ceb087adc2c49e 232 Gene3D G3DSA:3.40.190.10 98 193 1.5E-26 T 14-10-2018 JV59_27545 4896330bb718f75b0adcbf9edeef3e49 484 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 3 483 40.324 T 14-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 JV59_27545 4896330bb718f75b0adcbf9edeef3e49 484 Gene3D G3DSA:3.30.2010.10 75 148 2.2E-7 T 14-10-2018 JV59_27545 4896330bb718f75b0adcbf9edeef3e49 484 Gene3D G3DSA:1.25.40.10 252 470 1.2E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_27545 4896330bb718f75b0adcbf9edeef3e49 484 Pfam PF01435 Peptidase family M48 70 252 2.8E-27 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 JV59_27545 4896330bb718f75b0adcbf9edeef3e49 484 SUPERFAMILY SSF48452 310 455 2.35E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_27545 4896330bb718f75b0adcbf9edeef3e49 484 Pfam PF14559 Tetratricopeptide repeat 352 414 1.8E-9 T 14-10-2018 JV59_33005 bf6e8bc1752b405b5384b405b52211b6 514 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JV59_33005 bf6e8bc1752b405b5384b405b52211b6 514 SMART SM00382 225 368 4.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_33005 bf6e8bc1752b405b5384b405b52211b6 514 SUPERFAMILY SSF46689 460 512 3.23E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_33005 bf6e8bc1752b405b5384b405b52211b6 514 Gene3D G3DSA:3.30.70.260 1 80 2.0E-26 T 14-10-2018 JV59_33005 bf6e8bc1752b405b5384b405b52211b6 514 SUPERFAMILY SSF52540 205 444 1.02E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_33005 bf6e8bc1752b405b5384b405b52211b6 514 Gene3D G3DSA:1.10.8.60 376 455 6.8E-15 T 14-10-2018 JV59_33005 bf6e8bc1752b405b5384b405b52211b6 514 Gene3D G3DSA:1.10.10.60 460 513 1.6E-25 T 14-10-2018 JV59_33005 bf6e8bc1752b405b5384b405b52211b6 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JV59_33005 bf6e8bc1752b405b5384b405b52211b6 514 Gene3D G3DSA:3.40.50.300 197 375 6.5E-57 T 14-10-2018 JV59_33005 bf6e8bc1752b405b5384b405b52211b6 514 Gene3D G3DSA:3.30.450.20 82 187 1.4E-24 T 14-10-2018 JV59_33005 bf6e8bc1752b405b5384b405b52211b6 514 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 513 2.3E-28 T 14-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 JV59_33005 bf6e8bc1752b405b5384b405b52211b6 514 Pfam PF13188 PAS domain 84 134 8.7E-6 T 14-10-2018 IPR000014 PAS domain JV59_33005 bf6e8bc1752b405b5384b405b52211b6 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site JV59_33005 bf6e8bc1752b405b5384b405b52211b6 514 SMART SM00091 80 146 5.4E-8 T 14-10-2018 IPR000014 PAS domain JV59_33005 bf6e8bc1752b405b5384b405b52211b6 514 SUPERFAMILY SSF55021 1 68 6.62E-7 T 14-10-2018 JV59_33005 bf6e8bc1752b405b5384b405b52211b6 514 SUPERFAMILY SSF55785 83 173 9.42E-10 T 14-10-2018 IPR035965 PAS domain superfamily JV59_33005 bf6e8bc1752b405b5384b405b52211b6 514 Pfam PF00158 Sigma-54 interaction domain 206 370 3.6E-57 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JV59_23320 3f1a53a8f1d8c59a7e63ce4eaaa0d18d 375 Gene3D G3DSA:2.40.50.140 292 359 1.1E-21 T 14-10-2018 JV59_23320 3f1a53a8f1d8c59a7e63ce4eaaa0d18d 375 SUPERFAMILY SSF50331 242 374 1.93E-23 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal JV59_23320 3f1a53a8f1d8c59a7e63ce4eaaa0d18d 375 Pfam PF00005 ABC transporter 21 162 2.4E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_23320 3f1a53a8f1d8c59a7e63ce4eaaa0d18d 375 SUPERFAMILY SSF52540 4 249 1.11E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_23320 3f1a53a8f1d8c59a7e63ce4eaaa0d18d 375 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_23320 3f1a53a8f1d8c59a7e63ce4eaaa0d18d 375 Gene3D G3DSA:2.40.50.100 245 373 1.1E-21 T 14-10-2018 JV59_23320 3f1a53a8f1d8c59a7e63ce4eaaa0d18d 375 SMART SM00382 29 217 4.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_23320 3f1a53a8f1d8c59a7e63ce4eaaa0d18d 375 Gene3D G3DSA:3.40.50.300 1 244 1.6E-67 T 14-10-2018 JV59_23220 5ffc610da8bbfd4a0f3f84a9af54df9a 383 Pfam PF07690 Major Facilitator Superfamily 16 342 3.8E-36 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_23220 5ffc610da8bbfd4a0f3f84a9af54df9a 383 Gene3D G3DSA:1.20.1720.10 7 371 2.9E-72 T 14-10-2018 JV59_23220 5ffc610da8bbfd4a0f3f84a9af54df9a 383 SUPERFAMILY SSF103473 3 367 1.02E-53 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_34860 2c5be3a49f8062bb0fede1f7b9db1c88 182 PIRSF PIRSF000232 1 182 7.1E-63 T 14-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like JV59_34860 2c5be3a49f8062bb0fede1f7b9db1c88 182 SUPERFAMILY SSF55469 1 181 1.22E-42 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JV59_34860 2c5be3a49f8062bb0fede1f7b9db1c88 182 Pfam PF00881 Nitroreductase family 8 161 2.5E-22 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 JV59_34860 2c5be3a49f8062bb0fede1f7b9db1c88 182 Gene3D G3DSA:3.40.109.10 1 182 4.0E-42 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JV59_31935 27f23ddfbf8f1e457e4c4446ccc8f634 870 SUPERFAMILY SSF52540 175 548 1.53E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_31935 27f23ddfbf8f1e457e4c4446ccc8f634 870 SMART SM00382 601 750 6.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_31935 27f23ddfbf8f1e457e4c4446ccc8f634 870 SMART SM00382 214 360 1.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_31935 27f23ddfbf8f1e457e4c4446ccc8f634 870 Gene3D G3DSA:3.40.50.300 554 771 1.6E-68 T 14-10-2018 JV59_31935 27f23ddfbf8f1e457e4c4446ccc8f634 870 SMART SM01086 773 865 1.6E-5 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JV59_31935 27f23ddfbf8f1e457e4c4446ccc8f634 870 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 773 845 1.5E-11 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JV59_31935 27f23ddfbf8f1e457e4c4446ccc8f634 870 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 310 322 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 JV59_31935 27f23ddfbf8f1e457e4c4446ccc8f634 870 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 857 0.0 T 14-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 JV59_31935 27f23ddfbf8f1e457e4c4446ccc8f634 870 Gene3D G3DSA:1.10.1780.10 1 158 4.8E-32 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 JV59_31935 27f23ddfbf8f1e457e4c4446ccc8f634 870 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 767 4.7E-40 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JV59_31935 27f23ddfbf8f1e457e4c4446ccc8f634 870 Gene3D G3DSA:3.40.50.300 364 548 2.5E-42 T 14-10-2018 JV59_31935 27f23ddfbf8f1e457e4c4446ccc8f634 870 SUPERFAMILY SSF52540 550 840 2.83E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_31935 27f23ddfbf8f1e457e4c4446ccc8f634 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 668 1.5E-29 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JV59_31935 27f23ddfbf8f1e457e4c4446ccc8f634 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 712 726 1.5E-29 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JV59_31935 27f23ddfbf8f1e457e4c4446ccc8f634 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 679 697 1.5E-29 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JV59_31935 27f23ddfbf8f1e457e4c4446ccc8f634 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 623 1.5E-29 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JV59_31935 27f23ddfbf8f1e457e4c4446ccc8f634 870 Gene3D G3DSA:1.10.8.60 773 868 3.3E-12 T 14-10-2018 JV59_31935 27f23ddfbf8f1e457e4c4446ccc8f634 870 SUPERFAMILY SSF81923 12 126 3.14E-16 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 JV59_31935 27f23ddfbf8f1e457e4c4446ccc8f634 870 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 219 351 1.1E-10 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JV59_31935 27f23ddfbf8f1e457e4c4446ccc8f634 870 Gene3D G3DSA:3.40.50.300 174 363 2.2E-61 T 14-10-2018 JV59_19755 474ba8be1f7cd3b1dbc54ebb90960cd7 890 SUPERFAMILY SSF52540 175 535 2.26E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_19755 474ba8be1f7cd3b1dbc54ebb90960cd7 890 SMART SM00382 213 358 4.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_19755 474ba8be1f7cd3b1dbc54ebb90960cd7 890 SMART SM00382 624 766 1.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_19755 474ba8be1f7cd3b1dbc54ebb90960cd7 890 SUPERFAMILY SSF81923 18 124 9.22E-13 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 JV59_19755 474ba8be1f7cd3b1dbc54ebb90960cd7 890 Gene3D G3DSA:3.40.50.300 577 792 9.1E-69 T 14-10-2018 JV59_19755 474ba8be1f7cd3b1dbc54ebb90960cd7 890 SUPERFAMILY SSF52540 573 869 2.84E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_19755 474ba8be1f7cd3b1dbc54ebb90960cd7 890 Gene3D G3DSA:3.40.50.300 162 357 1.7E-62 T 14-10-2018 JV59_19755 474ba8be1f7cd3b1dbc54ebb90960cd7 890 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 658 676 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 JV59_19755 474ba8be1f7cd3b1dbc54ebb90960cd7 890 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 795 874 5.2E-13 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JV59_19755 474ba8be1f7cd3b1dbc54ebb90960cd7 890 SMART SM01086 795 885 5.7E-10 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JV59_19755 474ba8be1f7cd3b1dbc54ebb90960cd7 890 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 702 720 2.5E-33 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JV59_19755 474ba8be1f7cd3b1dbc54ebb90960cd7 890 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 628 646 2.5E-33 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JV59_19755 474ba8be1f7cd3b1dbc54ebb90960cd7 890 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 735 749 2.5E-33 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JV59_19755 474ba8be1f7cd3b1dbc54ebb90960cd7 890 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 673 691 2.5E-33 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JV59_19755 474ba8be1f7cd3b1dbc54ebb90960cd7 890 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 220 348 6.2E-10 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JV59_19755 474ba8be1f7cd3b1dbc54ebb90960cd7 890 Gene3D G3DSA:1.10.8.60 795 888 1.4E-13 T 14-10-2018 JV59_19755 474ba8be1f7cd3b1dbc54ebb90960cd7 890 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 309 321 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 JV59_19755 474ba8be1f7cd3b1dbc54ebb90960cd7 890 Gene3D G3DSA:3.40.50.300 359 571 2.1E-49 T 14-10-2018 JV59_19755 474ba8be1f7cd3b1dbc54ebb90960cd7 890 Gene3D G3DSA:1.10.1780.10 1 160 1.4E-37 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 JV59_19755 474ba8be1f7cd3b1dbc54ebb90960cd7 890 Pfam PF07724 AAA domain (Cdc48 subfamily) 624 788 5.0E-43 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JV59_19755 474ba8be1f7cd3b1dbc54ebb90960cd7 890 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 15 877 0.0 T 14-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 JV59_29710 8e8ad636eb1da4b2043cf8e0d609694a 428 Pfam PF00512 His Kinase A (phospho-acceptor) domain 219 284 1.1E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_29710 8e8ad636eb1da4b2043cf8e0d609694a 428 SUPERFAMILY SSF55874 295 416 1.25E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_29710 8e8ad636eb1da4b2043cf8e0d609694a 428 SUPERFAMILY SSF47384 201 285 2.16E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_29710 8e8ad636eb1da4b2043cf8e0d609694a 428 Gene3D G3DSA:1.10.287.130 168 287 5.8E-17 T 14-10-2018 JV59_29710 8e8ad636eb1da4b2043cf8e0d609694a 428 SMART SM00388 217 286 8.4E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_29710 8e8ad636eb1da4b2043cf8e0d609694a 428 Gene3D G3DSA:3.30.565.10 293 423 2.3E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_28620 55592dd7751d21161ba777b9f6a32b0e 232 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 5 225 43.37 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 JV59_28620 55592dd7751d21161ba777b9f6a32b0e 232 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 2.4E-92 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 JV59_28620 55592dd7751d21161ba777b9f6a32b0e 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 207 2.3E-42 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel JV59_35890 b208bfeff0f08f88313f498826aab06e 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 1.2E-155 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 JV59_35890 b208bfeff0f08f88313f498826aab06e 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.5E-43 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 JV59_35890 b208bfeff0f08f88313f498826aab06e 517 SUPERFAMILY SSF52402 189 412 1.54E-57 T 14-10-2018 JV59_35890 b208bfeff0f08f88313f498826aab06e 517 SUPERFAMILY SSF52317 9 200 7.49E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_35890 b208bfeff0f08f88313f498826aab06e 517 Gene3D G3DSA:3.40.50.620 202 397 8.9E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_35890 b208bfeff0f08f88313f498826aab06e 517 Pfam PF02540 NAD synthase 212 290 7.1E-8 T 14-10-2018 IPR022310 NAD/GMP synthase JV59_35890 b208bfeff0f08f88313f498826aab06e 517 Gene3D G3DSA:3.40.50.880 6 201 2.1E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_35890 b208bfeff0f08f88313f498826aab06e 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 4.0E-6 T 14-10-2018 JV59_35890 b208bfeff0f08f88313f498826aab06e 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 4.0E-6 T 14-10-2018 JV59_35890 b208bfeff0f08f88313f498826aab06e 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 4.0E-6 T 14-10-2018 JV59_35890 b208bfeff0f08f88313f498826aab06e 517 SUPERFAMILY SSF54810 397 517 5.75E-51 T 14-10-2018 JV59_35890 b208bfeff0f08f88313f498826aab06e 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 1.7E-6 T 14-10-2018 JV59_35890 b208bfeff0f08f88313f498826aab06e 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 1.7E-6 T 14-10-2018 JV59_35890 b208bfeff0f08f88313f498826aab06e 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 1.7E-6 T 14-10-2018 JV59_35890 b208bfeff0f08f88313f498826aab06e 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.1E-7 T 14-10-2018 JV59_35890 b208bfeff0f08f88313f498826aab06e 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.1E-7 T 14-10-2018 JV59_35890 b208bfeff0f08f88313f498826aab06e 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.1E-7 T 14-10-2018 JV59_35890 b208bfeff0f08f88313f498826aab06e 517 Pfam PF00117 Glutamine amidotransferase class-I 12 191 3.7E-43 T 14-10-2018 IPR017926 Glutamine amidotransferase JV59_35890 b208bfeff0f08f88313f498826aab06e 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.609 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 JV59_35890 b208bfeff0f08f88313f498826aab06e 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 4.3E-85 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 JV59_35890 b208bfeff0f08f88313f498826aab06e 517 Gene3D G3DSA:3.30.300.10 398 517 1.0E-50 T 14-10-2018 JV59_23335 c33aebe36cfbe5183e2f952f170a913c 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 2.6E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 JV59_23335 c33aebe36cfbe5183e2f952f170a913c 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 356 364 2.6E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 JV59_23335 c33aebe36cfbe5183e2f952f170a913c 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 398 415 2.6E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 JV59_23335 c33aebe36cfbe5183e2f952f170a913c 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 423 435 2.6E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 JV59_23335 c33aebe36cfbe5183e2f952f170a913c 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 377 388 2.6E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 JV59_23335 c33aebe36cfbe5183e2f952f170a913c 463 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 356 364 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site JV59_23335 c33aebe36cfbe5183e2f952f170a913c 463 SUPERFAMILY SSF51445 2 455 2.71E-156 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_23335 c33aebe36cfbe5183e2f952f170a913c 463 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site JV59_23335 c33aebe36cfbe5183e2f952f170a913c 463 Pfam PF00232 Glycosyl hydrolase family 1 2 458 8.5E-147 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 JV59_23335 c33aebe36cfbe5183e2f952f170a913c 463 Gene3D G3DSA:3.20.20.80 1 461 3.1E-148 T 14-10-2018 JV59_18495 168b823f7e3ac4e389110c2403f5648b 364 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 8 350 2.4E-132 T 14-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 JV59_18495 168b823f7e3ac4e389110c2403f5648b 364 SUPERFAMILY SSF52518 20 359 3.04E-92 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_18495 168b823f7e3ac4e389110c2403f5648b 364 Gene3D G3DSA:3.40.50.970 1 351 8.2E-102 T 14-10-2018 JV59_18495 168b823f7e3ac4e389110c2403f5648b 364 Pfam PF00676 Dehydrogenase E1 component 38 321 3.6E-76 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 JV59_39980 39630404a77b782684eec4781f1d8e30 40 Pfam PF13627 Prokaryotic lipoprotein-attachment site 7 28 1.7E-10 T 14-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site JV59_21530 b06e8c15488111a6c40dcef3f18874e3 275 Gene3D G3DSA:1.20.1560.10 1 262 8.3E-10 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_21530 b06e8c15488111a6c40dcef3f18874e3 275 SUPERFAMILY SSF90123 3 261 3.14E-19 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_21530 b06e8c15488111a6c40dcef3f18874e3 275 Pfam PF13748 ABC transporter transmembrane region 2 223 1.3E-79 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JV59_27620 9f7ec28f0d02473a5c9d45d5ca0d2377 348 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 348 4.0E-137 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 JV59_27620 9f7ec28f0d02473a5c9d45d5ca0d2377 348 Pfam PF03116 NQR2, RnfD, RnfE family 6 347 1.8E-102 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 JV59_27620 9f7ec28f0d02473a5c9d45d5ca0d2377 348 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 348 26.763 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 JV59_38910 1506ec9390f66d8122dc276813343528 286 SUPERFAMILY SSF50156 190 286 1.22E-17 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 JV59_38910 1506ec9390f66d8122dc276813343528 286 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 21 286 4.6E-67 T 14-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 JV59_38910 1506ec9390f66d8122dc276813343528 286 Gene3D G3DSA:2.30.42.10 182 286 1.0E-27 T 14-10-2018 JV59_38910 1506ec9390f66d8122dc276813343528 286 Pfam PF11356 Type II secretion system protein C 24 161 2.4E-34 T 14-10-2018 IPR024961 Type II secretion system protein C, N-terminal JV59_38910 1506ec9390f66d8122dc276813343528 286 Gene3D G3DSA:2.30.30.830 95 162 6.8E-25 T 14-10-2018 JV59_37865 6b8f7d21d13934dd61014440564650b5 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 1.1E-14 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_37865 6b8f7d21d13934dd61014440564650b5 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 1.1E-14 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_37865 6b8f7d21d13934dd61014440564650b5 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 1.1E-14 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_37865 6b8f7d21d13934dd61014440564650b5 84 SUPERFAMILY SSF50249 6 83 1.07E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_37865 6b8f7d21d13934dd61014440564650b5 84 Gene3D G3DSA:2.40.50.140 1 83 1.8E-37 T 14-10-2018 JV59_37865 6b8f7d21d13934dd61014440564650b5 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 24.344 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_37865 6b8f7d21d13934dd61014440564650b5 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 7.9E-37 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_37865 6b8f7d21d13934dd61014440564650b5 84 Pfam PF00366 Ribosomal protein S17 10 77 4.4E-33 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_37865 6b8f7d21d13934dd61014440564650b5 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 76 4.0E-36 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_37865 6b8f7d21d13934dd61014440564650b5 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 14-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37970 e15039c5cf63a67385a30ae9958b32b9 640 Pfam PF12848 ABC transporter 217 295 1.8E-27 T 14-10-2018 IPR032781 ABC-transporter extension domain JV59_37970 e15039c5cf63a67385a30ae9958b32b9 640 SUPERFAMILY SSF52540 2 258 7.87E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_37970 e15039c5cf63a67385a30ae9958b32b9 640 Gene3D G3DSA:3.40.50.300 275 540 1.0E-54 T 14-10-2018 JV59_37970 e15039c5cf63a67385a30ae9958b32b9 640 SMART SM00382 26 223 1.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_37970 e15039c5cf63a67385a30ae9958b32b9 640 SMART SM00382 337 503 1.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_37970 e15039c5cf63a67385a30ae9958b32b9 640 Gene3D G3DSA:3.40.50.300 7 274 1.7E-57 T 14-10-2018 JV59_37970 e15039c5cf63a67385a30ae9958b32b9 640 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_37970 e15039c5cf63a67385a30ae9958b32b9 640 Pfam PF00005 ABC transporter 17 178 6.9E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_37970 e15039c5cf63a67385a30ae9958b32b9 640 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_37970 e15039c5cf63a67385a30ae9958b32b9 640 SUPERFAMILY SSF52540 277 494 5.33E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_37970 e15039c5cf63a67385a30ae9958b32b9 640 Pfam PF00005 ABC transporter 328 459 1.6E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_36420 322e9118ff938c595707adc0a126a5be 64 PIRSF PIRSF039003 1 64 6.2E-34 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 JV59_36420 322e9118ff938c595707adc0a126a5be 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 3.8E-34 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 JV59_36420 322e9118ff938c595707adc0a126a5be 64 SUPERFAMILY SSF140319 1 62 1.57E-27 T 14-10-2018 IPR036762 IscX-like superfamily JV59_36420 322e9118ff938c595707adc0a126a5be 64 Pfam PF04384 Iron-sulphur cluster assembly 1 63 6.7E-33 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 JV59_36420 322e9118ff938c595707adc0a126a5be 64 Gene3D G3DSA:1.10.10.600 1 64 4.5E-29 T 14-10-2018 IPR036762 IscX-like superfamily JV59_27235 3acf5ba1902415545b9adf1a17a7d319 288 SMART SM00862 30 107 5.7E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_27235 3acf5ba1902415545b9adf1a17a7d319 288 Pfam PF00486 Transcriptional regulatory protein, C terminal 31 107 6.6E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_27235 3acf5ba1902415545b9adf1a17a7d319 288 SUPERFAMILY SSF46894 10 109 3.12E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_27235 3acf5ba1902415545b9adf1a17a7d319 288 Gene3D G3DSA:1.10.10.10 5 107 1.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_30940 0a5352dee12a8569204b23cea3f2e901 289 Gene3D G3DSA:3.40.190.10 98 263 2.1E-50 T 14-10-2018 JV59_30940 0a5352dee12a8569204b23cea3f2e901 289 SUPERFAMILY SSF46785 6 114 3.06E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_30940 0a5352dee12a8569204b23cea3f2e901 289 Gene3D G3DSA:1.10.10.10 6 93 4.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_30940 0a5352dee12a8569204b23cea3f2e901 289 Gene3D G3DSA:3.40.190.10 163 256 2.1E-50 T 14-10-2018 JV59_30940 0a5352dee12a8569204b23cea3f2e901 289 SUPERFAMILY SSF53850 91 285 4.19E-27 T 14-10-2018 JV59_30940 0a5352dee12a8569204b23cea3f2e901 289 Pfam PF03466 LysR substrate binding domain 90 282 1.4E-27 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_30940 0a5352dee12a8569204b23cea3f2e901 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 2.3E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_20310 505369932923bdec91e6678fdf66d674 401 Pfam PF01266 FAD dependent oxidoreductase 3 393 2.2E-63 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JV59_20310 505369932923bdec91e6678fdf66d674 401 Gene3D G3DSA:3.50.50.60 3 390 3.0E-80 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_20310 505369932923bdec91e6678fdf66d674 401 Gene3D G3DSA:3.30.9.10 86 356 3.0E-80 T 14-10-2018 JV59_20310 505369932923bdec91e6678fdf66d674 401 SUPERFAMILY SSF51905 3 298 1.25E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_35955 af24d5ec19142a1e465c32791f612470 142 Gene3D G3DSA:3.90.1010.10 1 141 4.6E-51 T 14-10-2018 JV59_35955 af24d5ec19142a1e465c32791f612470 142 SUPERFAMILY SSF82649 4 140 3.3E-49 T 14-10-2018 JV59_35955 af24d5ec19142a1e465c32791f612470 142 Pfam PF02657 Fe-S metabolism associated domain 21 139 1.3E-45 T 14-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like JV59_35955 af24d5ec19142a1e465c32791f612470 142 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 140 1.2E-45 T 14-10-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE JV59_36845 79878bf1e57604e001e0cbff708869b4 505 SMART SM01118 2 203 3.8E-43 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 JV59_36845 79878bf1e57604e001e0cbff708869b4 505 Gene3D G3DSA:1.40.20.10 211 411 1.5E-12 T 14-10-2018 IPR038186 CHAD domain superfamily JV59_36845 79878bf1e57604e001e0cbff708869b4 505 Gene3D G3DSA:2.40.320.10 1 199 1.1E-36 T 14-10-2018 JV59_36845 79878bf1e57604e001e0cbff708869b4 505 Pfam PF01928 CYTH domain 3 197 1.2E-33 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 JV59_36845 79878bf1e57604e001e0cbff708869b4 505 Pfam PF05235 CHAD domain 263 396 1.4E-7 T 14-10-2018 IPR007899 CHAD domain JV59_36845 79878bf1e57604e001e0cbff708869b4 505 SMART SM00880 229 496 8.3E-21 T 14-10-2018 IPR007899 CHAD domain JV59_36845 79878bf1e57604e001e0cbff708869b4 505 SUPERFAMILY SSF55154 1 216 1.5E-52 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 JV59_29240 47c54e1afeaad8c7df1387a7a94dba1a 192 Pfam PF16925 Bacterial transcriptional repressor C-terminal 100 165 7.6E-8 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JV59_29240 47c54e1afeaad8c7df1387a7a94dba1a 192 SUPERFAMILY SSF48498 77 189 6.85E-19 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JV59_29240 47c54e1afeaad8c7df1387a7a94dba1a 192 SUPERFAMILY SSF46689 3 79 5.64E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_29240 47c54e1afeaad8c7df1387a7a94dba1a 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 3.7E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_29240 47c54e1afeaad8c7df1387a7a94dba1a 192 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JV59_29240 47c54e1afeaad8c7df1387a7a94dba1a 192 Gene3D G3DSA:1.10.357.10 1 192 5.8E-37 T 14-10-2018 JV59_36415 d557dfdc0ac2cb4a4ff3d65f0c64d4bd 432 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 422 1.7E-103 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 JV59_36415 d557dfdc0ac2cb4a4ff3d65f0c64d4bd 432 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 4.8E-45 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 JV59_36415 d557dfdc0ac2cb4a4ff3d65f0c64d4bd 432 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 4.8E-45 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 JV59_36415 d557dfdc0ac2cb4a4ff3d65f0c64d4bd 432 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 4.8E-45 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 JV59_36415 d557dfdc0ac2cb4a4ff3d65f0c64d4bd 432 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 4.8E-45 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 JV59_36415 d557dfdc0ac2cb4a4ff3d65f0c64d4bd 432 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 4.8E-45 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 JV59_36415 d557dfdc0ac2cb4a4ff3d65f0c64d4bd 432 PIRSF PIRSF036388 1 432 3.4E-219 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 JV59_36415 d557dfdc0ac2cb4a4ff3d65f0c64d4bd 432 Hamap MF_00504 Peptidase B [pepB]. 3 428 65.632 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 JV59_36415 d557dfdc0ac2cb4a4ff3d65f0c64d4bd 432 Gene3D G3DSA:3.40.630.10 91 432 6.5E-108 T 14-10-2018 JV59_36415 d557dfdc0ac2cb4a4ff3d65f0c64d4bd 432 SUPERFAMILY SSF53187 105 429 9.42E-102 T 14-10-2018 JV59_36415 d557dfdc0ac2cb4a4ff3d65f0c64d4bd 432 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 JV59_36415 d557dfdc0ac2cb4a4ff3d65f0c64d4bd 432 Pfam PF12404 Peptidase 5 81 4.2E-33 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 JV59_23490 f5c190fac5408dcae358376b9c1a5fa0 224 Gene3D G3DSA:3.90.1140.10 1 224 1.4E-69 T 14-10-2018 JV59_23490 f5c190fac5408dcae358376b9c1a5fa0 224 SUPERFAMILY SSF55144 7 222 4.19E-41 T 14-10-2018 IPR009097 Cyclic phosphodiesterase JV59_23490 f5c190fac5408dcae358376b9c1a5fa0 224 Pfam PF08975 Domain of unknown function (DUF1868) 10 113 8.3E-31 T 14-10-2018 IPR015069 Domain of unknown function DUF1868 JV59_32600 5e5499a8c13d8f99fe12a625cd68aba4 319 Gene3D G3DSA:3.90.1200.10 104 312 6.3E-18 T 14-10-2018 JV59_32600 5e5499a8c13d8f99fe12a625cd68aba4 319 SUPERFAMILY SSF56112 10 295 5.83E-41 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily JV59_32600 5e5499a8c13d8f99fe12a625cd68aba4 319 Pfam PF01636 Phosphotransferase enzyme family 18 255 8.6E-25 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase JV59_19210 8b3d6f8a6b731a0ee8fa965b04ddd0fc 263 Gene3D G3DSA:3.40.190.10 112 211 3.5E-20 T 14-10-2018 JV59_19210 8b3d6f8a6b731a0ee8fa965b04ddd0fc 263 SUPERFAMILY SSF53850 26 248 1.41E-26 T 14-10-2018 JV59_19210 8b3d6f8a6b731a0ee8fa965b04ddd0fc 263 SMART SM00062 28 249 0.003 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_19210 8b3d6f8a6b731a0ee8fa965b04ddd0fc 263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 249 6.6E-14 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_19210 8b3d6f8a6b731a0ee8fa965b04ddd0fc 263 Gene3D G3DSA:3.40.190.10 35 249 3.5E-20 T 14-10-2018 JV59_39495 81b36f7ac97e7fa6ab106b9218376eec 313 Gene3D G3DSA:3.40.190.10 182 280 1.8E-56 T 14-10-2018 JV59_39495 81b36f7ac97e7fa6ab106b9218376eec 313 Gene3D G3DSA:3.40.190.10 94 304 1.8E-56 T 14-10-2018 JV59_39495 81b36f7ac97e7fa6ab106b9218376eec 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 2.9E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_39495 81b36f7ac97e7fa6ab106b9218376eec 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.8E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_39495 81b36f7ac97e7fa6ab106b9218376eec 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.8E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_39495 81b36f7ac97e7fa6ab106b9218376eec 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.8E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_39495 81b36f7ac97e7fa6ab106b9218376eec 313 Gene3D G3DSA:1.10.10.10 2 90 1.9E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_39495 81b36f7ac97e7fa6ab106b9218376eec 313 SUPERFAMILY SSF53850 92 307 5.12E-46 T 14-10-2018 JV59_39495 81b36f7ac97e7fa6ab106b9218376eec 313 SUPERFAMILY SSF46785 7 88 1.09E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_39495 81b36f7ac97e7fa6ab106b9218376eec 313 Pfam PF03466 LysR substrate binding domain 98 308 1.0E-28 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_20605 5f728d32764c98d3721d0a0da508ad04 194 Pfam PF16925 Bacterial transcriptional repressor C-terminal 104 187 2.1E-7 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JV59_20605 5f728d32764c98d3721d0a0da508ad04 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 56 4.1E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_20605 5f728d32764c98d3721d0a0da508ad04 194 SUPERFAMILY SSF48498 81 192 2.05E-21 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JV59_20605 5f728d32764c98d3721d0a0da508ad04 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 4.3E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_20605 5f728d32764c98d3721d0a0da508ad04 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 4.3E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_20605 5f728d32764c98d3721d0a0da508ad04 194 Gene3D G3DSA:1.10.357.10 1 194 2.3E-62 T 14-10-2018 JV59_20605 5f728d32764c98d3721d0a0da508ad04 194 SUPERFAMILY SSF46689 2 74 3.8E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_01615 9d40d5d0a3ba397c2dff87278014245e 635 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 135 252 2.0E-18 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal JV59_01615 9d40d5d0a3ba397c2dff87278014245e 635 SUPERFAMILY SSF55545 125 255 2.84E-23 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 JV59_01615 9d40d5d0a3ba397c2dff87278014245e 635 Gene3D G3DSA:3.30.379.10 129 254 1.2E-22 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 JV59_01615 9d40d5d0a3ba397c2dff87278014245e 635 PIRSF PIRSF001093 150 634 2.7E-93 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 JV59_01615 9d40d5d0a3ba397c2dff87278014245e 635 SUPERFAMILY SSF51445 256 616 4.21E-123 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_01615 9d40d5d0a3ba397c2dff87278014245e 635 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 256 602 7.0E-117 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 JV59_01615 9d40d5d0a3ba397c2dff87278014245e 635 Gene3D G3DSA:3.20.20.80 255 632 2.0E-133 T 14-10-2018 JV59_01615 9d40d5d0a3ba397c2dff87278014245e 635 PRINTS PR00738 Glycosyl hydrolase family 20 signature 420 433 2.3E-50 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 JV59_01615 9d40d5d0a3ba397c2dff87278014245e 635 PRINTS PR00738 Glycosyl hydrolase family 20 signature 250 267 2.3E-50 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 JV59_01615 9d40d5d0a3ba397c2dff87278014245e 635 PRINTS PR00738 Glycosyl hydrolase family 20 signature 215 235 2.3E-50 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 JV59_01615 9d40d5d0a3ba397c2dff87278014245e 635 PRINTS PR00738 Glycosyl hydrolase family 20 signature 349 366 2.3E-50 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 JV59_01615 9d40d5d0a3ba397c2dff87278014245e 635 PRINTS PR00738 Glycosyl hydrolase family 20 signature 567 583 2.3E-50 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 JV59_01615 9d40d5d0a3ba397c2dff87278014245e 635 PRINTS PR00738 Glycosyl hydrolase family 20 signature 279 300 2.3E-50 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 JV59_01615 9d40d5d0a3ba397c2dff87278014245e 635 PRINTS PR00738 Glycosyl hydrolase family 20 signature 398 416 2.3E-50 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 JV59_01615 9d40d5d0a3ba397c2dff87278014245e 635 PRINTS PR00738 Glycosyl hydrolase family 20 signature 585 602 2.3E-50 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 JV59_33510 1d0671ba2afb4e813b979ba4d9cfb8c3 546 Gene3D G3DSA:1.10.287.950 227 546 1.5E-66 T 14-10-2018 JV59_33510 1d0671ba2afb4e813b979ba4d9cfb8c3 546 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 182 2.9E-9 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain JV59_33510 1d0671ba2afb4e813b979ba4d9cfb8c3 546 SMART SM00283 284 545 5.7E-72 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_33510 1d0671ba2afb4e813b979ba4d9cfb8c3 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 338 512 4.0E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_33510 1d0671ba2afb4e813b979ba4d9cfb8c3 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 411 440 2.3E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_33510 1d0671ba2afb4e813b979ba4d9cfb8c3 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 382 409 2.3E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_33510 1d0671ba2afb4e813b979ba4d9cfb8c3 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 301 330 2.3E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_33510 1d0671ba2afb4e813b979ba4d9cfb8c3 546 SUPERFAMILY SSF58104 251 546 6.19E-67 T 14-10-2018 JV59_21515 dd507254fbcd63ab4b2a4e255166e2e9 323 SUPERFAMILY SSF46689 51 100 2.11E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_21515 dd507254fbcd63ab4b2a4e255166e2e9 323 SMART SM00342 67 151 1.6E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_21515 dd507254fbcd63ab4b2a4e255166e2e9 323 Gene3D G3DSA:1.10.10.60 47 156 1.4E-21 T 14-10-2018 JV59_21515 dd507254fbcd63ab4b2a4e255166e2e9 323 Pfam PF12833 Helix-turn-helix domain 73 152 1.6E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_21515 dd507254fbcd63ab4b2a4e255166e2e9 323 SUPERFAMILY SSF46689 103 152 8.06E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_21170 da2e9bf53ee903eaee0cb83dcd65a140 606 ProSitePatterns PS00211 ABC transporters family signature. 502 516 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_21170 da2e9bf53ee903eaee0cb83dcd65a140 606 Pfam PF00664 ABC transporter transmembrane region 46 311 2.4E-47 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JV59_21170 da2e9bf53ee903eaee0cb83dcd65a140 606 SMART SM00382 390 582 3.5E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_21170 da2e9bf53ee903eaee0cb83dcd65a140 606 SUPERFAMILY SSF90123 34 341 1.2E-72 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_21170 da2e9bf53ee903eaee0cb83dcd65a140 606 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 26 601 5.7E-276 T 14-10-2018 IPR011918 ABC transporter, ATP-binding/permease protein JV59_21170 da2e9bf53ee903eaee0cb83dcd65a140 606 Gene3D G3DSA:1.20.1560.10 30 352 1.1E-80 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_21170 da2e9bf53ee903eaee0cb83dcd65a140 606 SUPERFAMILY SSF52540 354 601 4.52E-93 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_21170 da2e9bf53ee903eaee0cb83dcd65a140 606 Pfam PF00005 ABC transporter 384 530 6.9E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_21170 da2e9bf53ee903eaee0cb83dcd65a140 606 Gene3D G3DSA:3.40.50.300 353 606 1.8E-93 T 14-10-2018 JV59_39660 fec3b313935c997249f6db70904cb63e 185 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 178 15.979 T 14-10-2018 IPR007336 Der GTPase activator GO:0005096 JV59_39660 fec3b313935c997249f6db70904cb63e 185 Pfam PF04220 Der GTPase activator (YihI) 19 175 3.4E-44 T 14-10-2018 IPR007336 Der GTPase activator GO:0005096 JV59_00835 ae549e3e0c48a1f598d2d4f15e114444 351 Pfam PF00633 Helix-hairpin-helix motif 98 125 2.8E-6 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 JV59_00835 ae549e3e0c48a1f598d2d4f15e114444 351 SUPERFAMILY SSF55811 218 345 1.38E-26 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JV59_00835 ae549e3e0c48a1f598d2d4f15e114444 351 Gene3D G3DSA:1.10.1670.10 7 209 2.6E-87 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 JV59_00835 ae549e3e0c48a1f598d2d4f15e114444 351 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 266 1.8E-126 T 14-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 JV59_00835 ae549e3e0c48a1f598d2d4f15e114444 351 SUPERFAMILY SSF48150 3 223 1.27E-74 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 JV59_00835 ae549e3e0c48a1f598d2d4f15e114444 351 Pfam PF14815 NUDIX domain 231 343 7.6E-24 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 JV59_00835 ae549e3e0c48a1f598d2d4f15e114444 351 ProSitePatterns PS01155 Endonuclease III family signature. 100 129 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 JV59_00835 ae549e3e0c48a1f598d2d4f15e114444 351 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 165 1.6E-20 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 JV59_00835 ae549e3e0c48a1f598d2d4f15e114444 351 SMART SM00478 37 188 3.0E-45 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 JV59_00835 ae549e3e0c48a1f598d2d4f15e114444 351 Gene3D G3DSA:1.10.340.30 19 130 2.6E-87 T 14-10-2018 JV59_00835 ae549e3e0c48a1f598d2d4f15e114444 351 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 JV59_00835 ae549e3e0c48a1f598d2d4f15e114444 351 Gene3D G3DSA:3.90.79.10 220 346 1.2E-15 T 14-10-2018 JV59_00835 ae549e3e0c48a1f598d2d4f15e114444 351 SMART SM00525 189 209 1.8E-5 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 JV59_30325 d4a30e1fc0bac351b202af24875d6fde 303 Pfam PF03466 LysR substrate binding domain 97 299 6.7E-17 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_30325 d4a30e1fc0bac351b202af24875d6fde 303 Gene3D G3DSA:3.40.190.10 92 298 4.1E-36 T 14-10-2018 JV59_30325 d4a30e1fc0bac351b202af24875d6fde 303 Gene3D G3DSA:3.40.190.10 176 274 4.1E-36 T 14-10-2018 JV59_30325 d4a30e1fc0bac351b202af24875d6fde 303 SUPERFAMILY SSF46785 7 88 2.88E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_30325 d4a30e1fc0bac351b202af24875d6fde 303 Gene3D G3DSA:1.10.10.10 3 90 4.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_30325 d4a30e1fc0bac351b202af24875d6fde 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 2.6E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_30325 d4a30e1fc0bac351b202af24875d6fde 303 SUPERFAMILY SSF53850 92 300 1.05E-28 T 14-10-2018 JV59_24805 24f42a36c1073d524608e4edf51cd448 370 Gene3D G3DSA:3.30.70.270 189 355 1.9E-39 T 14-10-2018 JV59_24805 24f42a36c1073d524608e4edf51cd448 370 SMART SM00267 191 356 5.6E-24 T 14-10-2018 IPR000160 GGDEF domain JV59_24805 24f42a36c1073d524608e4edf51cd448 370 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 198 353 7.0E-33 T 14-10-2018 IPR000160 GGDEF domain JV59_24805 24f42a36c1073d524608e4edf51cd448 370 Gene3D G3DSA:1.10.490.10 17 173 2.8E-39 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 JV59_24805 24f42a36c1073d524608e4edf51cd448 370 SUPERFAMILY SSF55073 207 352 1.8E-35 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_24805 24f42a36c1073d524608e4edf51cd448 370 SUPERFAMILY SSF46458 5 162 2.64E-32 T 14-10-2018 IPR009050 Globin-like superfamily JV59_24805 24f42a36c1073d524608e4edf51cd448 370 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 352 1.4E-32 T 14-10-2018 IPR000160 GGDEF domain JV59_24805 24f42a36c1073d524608e4edf51cd448 370 Pfam PF11563 Protoglobin 16 168 5.1E-29 T 14-10-2018 JV59_34330 b4cbbd4d7b71fda0904f35620c0242f9 328 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 326 21.542 T 14-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 JV59_34330 b4cbbd4d7b71fda0904f35620c0242f9 328 Gene3D G3DSA:3.20.20.120 99 300 1.7E-113 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily JV59_34330 b4cbbd4d7b71fda0904f35620c0242f9 328 SUPERFAMILY SSF51604 105 319 2.75E-46 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily JV59_34330 b4cbbd4d7b71fda0904f35620c0242f9 328 Gene3D G3DSA:3.30.390.10 4 305 1.7E-113 T 14-10-2018 IPR029017 Enolase-like, N-terminal JV59_34330 b4cbbd4d7b71fda0904f35620c0242f9 328 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 311 7.7E-105 T 14-10-2018 JV59_34330 b4cbbd4d7b71fda0904f35620c0242f9 328 SUPERFAMILY SSF54826 1 100 1.45E-26 T 14-10-2018 JV59_34330 b4cbbd4d7b71fda0904f35620c0242f9 328 SMART SM00922 116 213 4.1E-8 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal JV59_34330 b4cbbd4d7b71fda0904f35620c0242f9 328 Pfam PF13378 Enolase C-terminal domain-like 126 276 4.5E-12 T 14-10-2018 IPR029065 Enolase C-terminal domain-like JV59_27155 7fd773e3c0078d75648b41b0cb9f460e 308 SMART SM00771 169 299 6.6E-74 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 JV59_27155 7fd773e3c0078d75648b41b0cb9f460e 308 Gene3D G3DSA:3.30.1400.10 168 307 1.3E-49 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 JV59_27155 7fd773e3c0078d75648b41b0cb9f460e 308 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 171 298 1.2E-46 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 JV59_27155 7fd773e3c0078d75648b41b0cb9f460e 308 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 301 22.611 T 14-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 JV59_27155 7fd773e3c0078d75648b41b0cb9f460e 308 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 172 303 4.0E-68 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 JV59_27155 7fd773e3c0078d75648b41b0cb9f460e 308 SUPERFAMILY SSF64383 171 302 1.83E-48 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 JV59_27155 7fd773e3c0078d75648b41b0cb9f460e 308 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 299 7.8E-88 T 14-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 JV59_26560 200c6df7f8029aa4aed81a9d76ccf824 92 Pfam PF04977 Septum formation initiator 11 89 7.1E-28 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC JV59_26560 200c6df7f8029aa4aed81a9d76ccf824 92 Gene3D G3DSA:1.20.5.400 22 63 5.0E-9 T 14-10-2018 JV59_26560 200c6df7f8029aa4aed81a9d76ccf824 92 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 36.124 T 14-10-2018 IPR023081 Cell division protein FtsB JV59_19600 8d0d0761ed9de628b234440f968c5da3 115 TIGRFAM TIGR02809 phasin_3: phasin family protein 4 113 3.5E-55 T 14-10-2018 IPR014176 Phasin, subfamily 3 JV59_19600 8d0d0761ed9de628b234440f968c5da3 115 Pfam PF09361 Phasin protein 8 107 3.9E-19 T 14-10-2018 IPR018968 Phasin JV59_19600 8d0d0761ed9de628b234440f968c5da3 115 PIRSF PIRSF028226 1 115 1.3E-55 T 14-10-2018 IPR014176 Phasin, subfamily 3 JV59_24405 520cd311fc7db48a419d2eb5a18a1bba 152 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 9 143 7.4E-40 T 14-10-2018 IPR012660 Thioesterase, putative JV59_24405 520cd311fc7db48a419d2eb5a18a1bba 152 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 4 143 7.1E-42 T 14-10-2018 IPR012660 Thioesterase, putative JV59_24405 520cd311fc7db48a419d2eb5a18a1bba 152 SUPERFAMILY SSF54637 5 142 2.69E-29 T 14-10-2018 IPR029069 HotDog domain superfamily JV59_24405 520cd311fc7db48a419d2eb5a18a1bba 152 Gene3D G3DSA:3.10.129.10 2 146 1.9E-44 T 14-10-2018 JV59_37795 c2e40ef21eac87b252f0f9618e096b5b 206 Pfam PF01479 S4 domain 97 143 2.5E-18 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37795 c2e40ef21eac87b252f0f9618e096b5b 206 SMART SM01390 3 95 6.8E-50 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 JV59_37795 c2e40ef21eac87b252f0f9618e096b5b 206 Gene3D G3DSA:3.10.290.10 103 191 2.4E-36 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 JV59_37795 c2e40ef21eac87b252f0f9618e096b5b 206 SMART SM00363 96 160 1.4E-20 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37795 c2e40ef21eac87b252f0f9618e096b5b 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37795 c2e40ef21eac87b252f0f9618e096b5b 206 Gene3D G3DSA:1.10.1050.10 1 102 5.8E-45 T 14-10-2018 JV59_37795 c2e40ef21eac87b252f0f9618e096b5b 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.398 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 JV59_37795 c2e40ef21eac87b252f0f9618e096b5b 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 3.0E-85 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 JV59_37795 c2e40ef21eac87b252f0f9618e096b5b 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.6E-32 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 JV59_37795 c2e40ef21eac87b252f0f9618e096b5b 206 SUPERFAMILY SSF55174 3 206 6.54E-73 T 14-10-2018 JV59_01465 a1c0515e0af85b48ff80388a97066868 578 Pfam PF02272 DHHA1 domain 319 449 1.5E-25 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 JV59_01465 a1c0515e0af85b48ff80388a97066868 578 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 574 9.3E-159 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 JV59_01465 a1c0515e0af85b48ff80388a97066868 578 Pfam PF01368 DHH family 71 206 8.0E-9 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 JV59_01465 a1c0515e0af85b48ff80388a97066868 578 Gene3D G3DSA:3.90.1640.30 44 323 1.8E-88 T 14-10-2018 JV59_01465 a1c0515e0af85b48ff80388a97066868 578 SUPERFAMILY SSF64182 45 463 1.05E-117 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily JV59_01465 a1c0515e0af85b48ff80388a97066868 578 Gene3D G3DSA:3.10.310.30 324 455 3.0E-31 T 14-10-2018 JV59_25240 8d9be85a9b293b288a885e49d5754921 251 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 81 241 2.6E-63 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 JV59_25240 8d9be85a9b293b288a885e49d5754921 251 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 201 229 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 JV59_25240 8d9be85a9b293b288a885e49d5754921 251 Gene3D G3DSA:2.160.10.10 142 250 2.2E-33 T 14-10-2018 JV59_25240 8d9be85a9b293b288a885e49d5754921 251 Gene3D G3DSA:1.10.3130.10 4 141 1.3E-40 T 14-10-2018 JV59_25240 8d9be85a9b293b288a885e49d5754921 251 Pfam PF06426 Serine acetyltransferase, N-terminal 9 111 4.0E-25 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 JV59_25240 8d9be85a9b293b288a885e49d5754921 251 SUPERFAMILY SSF51161 8 243 5.41E-58 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JV59_25240 8d9be85a9b293b288a885e49d5754921 251 PIRSF PIRSF000441 74 250 6.2E-57 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 JV59_25240 8d9be85a9b293b288a885e49d5754921 251 SMART SM00971 8 112 5.0E-25 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 JV59_25240 8d9be85a9b293b288a885e49d5754921 251 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 192 225 1.6E-6 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_37710 098ecc9b71db9d33f8b7ed7f9a6735a6 1205 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 592 706 1.8E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_37710 098ecc9b71db9d33f8b7ed7f9a6735a6 1205 SUPERFAMILY SSF52172 725 852 6.4E-22 T 14-10-2018 IPR011006 CheY-like superfamily JV59_37710 098ecc9b71db9d33f8b7ed7f9a6735a6 1205 Pfam PF00512 His Kinase A (phospho-acceptor) domain 480 545 5.8E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_37710 098ecc9b71db9d33f8b7ed7f9a6735a6 1205 SMART SM00388 480 545 2.8E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_37710 098ecc9b71db9d33f8b7ed7f9a6735a6 1205 Pfam PF01627 Hpt domain 1051 1116 1.1E-9 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 JV59_37710 098ecc9b71db9d33f8b7ed7f9a6735a6 1205 SUPERFAMILY SSF55874 534 704 1.31E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_37710 098ecc9b71db9d33f8b7ed7f9a6735a6 1205 SUPERFAMILY SSF47384 465 546 5.3E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_37710 098ecc9b71db9d33f8b7ed7f9a6735a6 1205 Gene3D G3DSA:1.10.287.130 452 543 1.8E-28 T 14-10-2018 JV59_37710 098ecc9b71db9d33f8b7ed7f9a6735a6 1205 Pfam PF00072 Response regulator receiver domain 728 847 1.8E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_37710 098ecc9b71db9d33f8b7ed7f9a6735a6 1205 Pfam PF00072 Response regulator receiver domain 881 989 1.2E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_37710 098ecc9b71db9d33f8b7ed7f9a6735a6 1205 Gene3D G3DSA:3.30.565.10 544 711 8.5E-53 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_37710 098ecc9b71db9d33f8b7ed7f9a6735a6 1205 Gene3D G3DSA:3.40.50.2300 876 1010 6.7E-38 T 14-10-2018 JV59_37710 098ecc9b71db9d33f8b7ed7f9a6735a6 1205 PRINTS PR00344 Bacterial sensor protein C-terminal signature 651 661 2.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_37710 098ecc9b71db9d33f8b7ed7f9a6735a6 1205 PRINTS PR00344 Bacterial sensor protein C-terminal signature 692 705 2.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_37710 098ecc9b71db9d33f8b7ed7f9a6735a6 1205 PRINTS PR00344 Bacterial sensor protein C-terminal signature 633 647 2.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_37710 098ecc9b71db9d33f8b7ed7f9a6735a6 1205 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 686 2.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_37710 098ecc9b71db9d33f8b7ed7f9a6735a6 1205 SUPERFAMILY SSF47226 974 1101 8.77E-16 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_37710 098ecc9b71db9d33f8b7ed7f9a6735a6 1205 Gene3D G3DSA:1.20.120.160 1016 1124 6.2E-17 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_37710 098ecc9b71db9d33f8b7ed7f9a6735a6 1205 SMART SM00387 592 708 4.9E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_37710 098ecc9b71db9d33f8b7ed7f9a6735a6 1205 SMART SM00448 726 847 7.1E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_37710 098ecc9b71db9d33f8b7ed7f9a6735a6 1205 SMART SM00448 878 991 1.5E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_37710 098ecc9b71db9d33f8b7ed7f9a6735a6 1205 Gene3D G3DSA:3.40.50.2300 719 874 2.3E-22 T 14-10-2018 JV59_37710 098ecc9b71db9d33f8b7ed7f9a6735a6 1205 SUPERFAMILY SSF52172 876 995 2.42E-35 T 14-10-2018 IPR011006 CheY-like superfamily JV59_00365 25300261524856ffa0cb3f9fa4ed60ee 576 Gene3D G3DSA:3.10.350.10 531 576 4.2E-15 T 14-10-2018 IPR036779 LysM domain superfamily JV59_00365 25300261524856ffa0cb3f9fa4ed60ee 576 SUPERFAMILY SSF54106 413 457 1.83E-10 T 14-10-2018 JV59_00365 25300261524856ffa0cb3f9fa4ed60ee 576 Pfam PF01476 LysM domain 415 457 7.6E-15 T 14-10-2018 IPR018392 LysM domain JV59_00365 25300261524856ffa0cb3f9fa4ed60ee 576 Pfam PF01476 LysM domain 479 521 1.4E-11 T 14-10-2018 IPR018392 LysM domain JV59_00365 25300261524856ffa0cb3f9fa4ed60ee 576 Pfam PF01476 LysM domain 532 574 1.2E-13 T 14-10-2018 IPR018392 LysM domain JV59_00365 25300261524856ffa0cb3f9fa4ed60ee 576 SMART SM00257 414 457 8.2E-16 T 14-10-2018 IPR018392 LysM domain JV59_00365 25300261524856ffa0cb3f9fa4ed60ee 576 SMART SM00257 531 574 8.2E-15 T 14-10-2018 IPR018392 LysM domain JV59_00365 25300261524856ffa0cb3f9fa4ed60ee 576 SMART SM00257 478 521 8.1E-13 T 14-10-2018 IPR018392 LysM domain JV59_00365 25300261524856ffa0cb3f9fa4ed60ee 576 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 173 393 5.1E-46 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 JV59_00365 25300261524856ffa0cb3f9fa4ed60ee 576 SUPERFAMILY SSF54106 477 521 1.22E-9 T 14-10-2018 JV59_00365 25300261524856ffa0cb3f9fa4ed60ee 576 SUPERFAMILY SSF53187 171 396 2.57E-48 T 14-10-2018 JV59_00365 25300261524856ffa0cb3f9fa4ed60ee 576 Gene3D G3DSA:2.60.40.3500 26 137 5.5E-26 T 14-10-2018 JV59_00365 25300261524856ffa0cb3f9fa4ed60ee 576 Gene3D G3DSA:3.10.350.10 406 462 8.1E-16 T 14-10-2018 IPR036779 LysM domain superfamily JV59_00365 25300261524856ffa0cb3f9fa4ed60ee 576 Gene3D G3DSA:3.10.350.10 466 530 1.7E-16 T 14-10-2018 IPR036779 LysM domain superfamily JV59_00365 25300261524856ffa0cb3f9fa4ed60ee 576 SUPERFAMILY SSF54106 531 574 6.28E-10 T 14-10-2018 JV59_00365 25300261524856ffa0cb3f9fa4ed60ee 576 Gene3D G3DSA:3.40.630.40 161 402 1.7E-64 T 14-10-2018 JV59_00365 25300261524856ffa0cb3f9fa4ed60ee 576 SMART SM00646 233 393 5.4E-65 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 JV59_00365 25300261524856ffa0cb3f9fa4ed60ee 576 Pfam PF11741 AMIN domain 33 134 1.2E-17 T 14-10-2018 IPR021731 AMIN domain JV59_21835 eac3803b2eb4ad595e3f147aa4611f03 279 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 116 236 1.4E-26 T 14-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain JV59_21835 eac3803b2eb4ad595e3f147aa4611f03 279 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 257 1.1E-39 T 14-10-2018 IPR017592 Pilus assembly, Flp-type CpaB JV59_29070 bd496132c4186146db2165febaf426fd 476 SUPERFAMILY SSF161070 10 457 8.37E-129 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 JV59_29070 bd496132c4186146db2165febaf426fd 476 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 34 48 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JV59_29070 bd496132c4186146db2165febaf426fd 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 1.8E-13 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JV59_29070 bd496132c4186146db2165febaf426fd 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 1.8E-13 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JV59_29070 bd496132c4186146db2165febaf426fd 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 315 335 1.8E-13 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JV59_29070 bd496132c4186146db2165febaf426fd 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 91 117 1.8E-13 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JV59_29070 bd496132c4186146db2165febaf426fd 476 Pfam PF00209 Sodium:neurotransmitter symporter family 10 120 8.2E-23 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JV59_29070 bd496132c4186146db2165febaf426fd 476 Pfam PF00209 Sodium:neurotransmitter symporter family 150 447 6.1E-32 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JV59_21750 9ccc28a3a73d43cf5374b543fa830270 301 SUPERFAMILY SSF46785 6 85 8.11E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_21750 9ccc28a3a73d43cf5374b543fa830270 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_21750 9ccc28a3a73d43cf5374b543fa830270 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_21750 9ccc28a3a73d43cf5374b543fa830270 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_21750 9ccc28a3a73d43cf5374b543fa830270 301 SUPERFAMILY SSF53850 93 297 5.79E-38 T 14-10-2018 JV59_21750 9ccc28a3a73d43cf5374b543fa830270 301 Gene3D G3DSA:3.40.190.290 94 294 7.1E-59 T 14-10-2018 JV59_21750 9ccc28a3a73d43cf5374b543fa830270 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.1E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_21750 9ccc28a3a73d43cf5374b543fa830270 301 Pfam PF03466 LysR substrate binding domain 93 292 2.3E-35 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_21750 9ccc28a3a73d43cf5374b543fa830270 301 Gene3D G3DSA:1.10.10.10 5 93 1.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_33950 d4202106a7a4b2166e6d5e3bcc978cbd 374 SMART SM01002 149 297 4.7E-88 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain JV59_33950 d4202106a7a4b2166e6d5e3bcc978cbd 374 Gene3D G3DSA:3.40.50.720 3 353 2.1E-136 T 14-10-2018 JV59_33950 d4202106a7a4b2166e6d5e3bcc978cbd 374 SMART SM01003 4 137 3.2E-79 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal JV59_33950 d4202106a7a4b2166e6d5e3bcc978cbd 374 Gene3D G3DSA:3.40.50.720 130 305 2.1E-136 T 14-10-2018 JV59_33950 d4202106a7a4b2166e6d5e3bcc978cbd 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 2.4E-83 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain JV59_33950 d4202106a7a4b2166e6d5e3bcc978cbd 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 6.1E-46 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal JV59_33950 d4202106a7a4b2166e6d5e3bcc978cbd 374 PIRSF PIRSF000183 1 371 9.0E-157 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 JV59_33950 d4202106a7a4b2166e6d5e3bcc978cbd 374 SUPERFAMILY SSF52283 1 360 1.19E-66 T 14-10-2018 JV59_33950 d4202106a7a4b2166e6d5e3bcc978cbd 374 SUPERFAMILY SSF51735 137 303 1.56E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_33950 d4202106a7a4b2166e6d5e3bcc978cbd 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 1.0E-155 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 JV59_33220 cf461eac96e3056b7b02c0a1f14956c7 283 Pfam PF02811 PHP domain 4 182 5.2E-10 T 14-10-2018 IPR004013 PHP domain GO:0003824 JV59_33220 cf461eac96e3056b7b02c0a1f14956c7 283 SMART SM00481 3 70 4.9E-13 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal JV59_33220 cf461eac96e3056b7b02c0a1f14956c7 283 SUPERFAMILY SSF89550 1 275 6.08E-54 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 JV59_33220 cf461eac96e3056b7b02c0a1f14956c7 283 Gene3D G3DSA:3.20.20.140 3 250 1.4E-80 T 14-10-2018 JV59_33220 cf461eac96e3056b7b02c0a1f14956c7 283 Gene3D G3DSA:1.10.150.650 98 169 1.4E-80 T 14-10-2018 JV59_31090 0252fdcbc1948d9d755ba7c7978dcb97 249 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.5E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 JV59_31090 0252fdcbc1948d9d755ba7c7978dcb97 249 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.5E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 JV59_31090 0252fdcbc1948d9d755ba7c7978dcb97 249 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 JV59_31090 0252fdcbc1948d9d755ba7c7978dcb97 249 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 7.0E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 JV59_31090 0252fdcbc1948d9d755ba7c7978dcb97 249 Gene3D G3DSA:1.10.10.10 165 247 8.8E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_31090 0252fdcbc1948d9d755ba7c7978dcb97 249 SMART SM00100 30 151 3.0E-20 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JV59_31090 0252fdcbc1948d9d755ba7c7978dcb97 249 SUPERFAMILY SSF51206 23 162 2.75E-31 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JV59_31090 0252fdcbc1948d9d755ba7c7978dcb97 249 SUPERFAMILY SSF46785 165 244 6.26E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_31090 0252fdcbc1948d9d755ba7c7978dcb97 249 Gene3D G3DSA:2.60.120.10 43 164 3.8E-48 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_31090 0252fdcbc1948d9d755ba7c7978dcb97 249 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 2.4E-14 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JV59_31090 0252fdcbc1948d9d755ba7c7978dcb97 249 SMART SM00419 187 235 4.3E-15 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 JV59_19140 aed6e9df4bfa4da13cb0d4327a472dce 77 Pfam PF11869 Protein of unknown function (DUF3389) 1 76 2.2E-33 T 14-10-2018 IPR021811 Protein of unknown function DUF3389 JV59_16085 e0881766a6d7939a0170dfc10a056ad2 289 Gene3D G3DSA:3.40.630.10 7 284 1.0E-87 T 14-10-2018 JV59_16085 e0881766a6d7939a0170dfc10a056ad2 289 SUPERFAMILY SSF53187 3 287 3.64E-69 T 14-10-2018 JV59_16085 e0881766a6d7939a0170dfc10a056ad2 289 Gene3D G3DSA:2.20.25.160 214 261 1.0E-87 T 14-10-2018 JV59_16085 e0881766a6d7939a0170dfc10a056ad2 289 Hamap MF_00704 Probable aspartoacylase. 2 289 29.163 T 14-10-2018 IPR016708 Aspartoacylase GO:0016811 JV59_16085 e0881766a6d7939a0170dfc10a056ad2 289 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 4 283 2.0E-31 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 JV59_16085 e0881766a6d7939a0170dfc10a056ad2 289 PIRSF PIRSF018001 2 289 7.2E-62 T 14-10-2018 IPR016708 Aspartoacylase GO:0016811 JV59_30535 12e725d7912a45a3ef500a0e15faaaf0 238 Gene3D G3DSA:3.40.50.2300 3 122 7.3E-35 T 14-10-2018 JV59_30535 12e725d7912a45a3ef500a0e15faaaf0 238 Pfam PF00072 Response regulator receiver domain 8 115 3.9E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_30535 12e725d7912a45a3ef500a0e15faaaf0 238 SUPERFAMILY SSF46894 139 235 1.5E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_30535 12e725d7912a45a3ef500a0e15faaaf0 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 233 1.1E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_30535 12e725d7912a45a3ef500a0e15faaaf0 238 SMART SM00448 5 115 3.5E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_30535 12e725d7912a45a3ef500a0e15faaaf0 238 Gene3D G3DSA:1.10.10.10 125 238 1.3E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_30535 12e725d7912a45a3ef500a0e15faaaf0 238 SMART SM00862 157 233 3.0E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_30535 12e725d7912a45a3ef500a0e15faaaf0 238 SUPERFAMILY SSF52172 7 124 1.99E-36 T 14-10-2018 IPR011006 CheY-like superfamily JV59_22495 e2a93a1162a8668f51080cffeaac3bec 526 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 357 367 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site JV59_22495 e2a93a1162a8668f51080cffeaac3bec 526 Gene3D G3DSA:3.30.70.80 41 126 4.3E-16 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 JV59_22495 e2a93a1162a8668f51080cffeaac3bec 526 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 448 511 1.2E-13 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial JV59_22495 e2a93a1162a8668f51080cffeaac3bec 526 Gene3D G3DSA:3.40.50.200 140 423 1.7E-100 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 JV59_22495 e2a93a1162a8668f51080cffeaac3bec 526 SUPERFAMILY SSF89260 428 514 1.7E-5 T 14-10-2018 JV59_22495 e2a93a1162a8668f51080cffeaac3bec 526 SUPERFAMILY SSF54897 50 129 1.02E-12 T 14-10-2018 JV59_22495 e2a93a1162a8668f51080cffeaac3bec 526 SUPERFAMILY SSF52743 139 399 1.83E-80 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 JV59_22495 e2a93a1162a8668f51080cffeaac3bec 526 PRINTS PR00723 Subtilisin serine protease family (S8) signature 167 186 8.2E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related JV59_22495 e2a93a1162a8668f51080cffeaac3bec 526 PRINTS PR00723 Subtilisin serine protease family (S8) signature 356 372 8.2E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related JV59_22495 e2a93a1162a8668f51080cffeaac3bec 526 PRINTS PR00723 Subtilisin serine protease family (S8) signature 205 218 8.2E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related JV59_22495 e2a93a1162a8668f51080cffeaac3bec 526 Pfam PF00082 Subtilase family 167 395 8.5E-36 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 JV59_22495 e2a93a1162a8668f51080cffeaac3bec 526 Pfam PF05922 Peptidase inhibitor I9 53 130 2.0E-12 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 JV59_22495 e2a93a1162a8668f51080cffeaac3bec 526 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 209 219 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site JV59_22495 e2a93a1162a8668f51080cffeaac3bec 526 Gene3D G3DSA:2.60.120.380 427 526 2.6E-40 T 14-10-2018 JV59_22495 e2a93a1162a8668f51080cffeaac3bec 526 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 172 183 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site JV59_02270 5e28467e1660c2c01b81ba00942448bb 438 Pfam PF11973 NQRA C-terminal domain 261 310 4.2E-21 T 14-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 JV59_02270 5e28467e1660c2c01b81ba00942448bb 438 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 438 7.6E-200 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 JV59_02270 5e28467e1660c2c01b81ba00942448bb 438 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 256 9.5E-114 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 JV59_02270 5e28467e1660c2c01b81ba00942448bb 438 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 438 43.833 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 JV59_17655 ac08be29a374a20d964647227f46efcd 271 Gene3D G3DSA:3.40.1350.10 103 213 5.3E-12 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 JV59_17655 ac08be29a374a20d964647227f46efcd 271 SUPERFAMILY SSF57783 226 269 9.01E-8 T 14-10-2018 JV59_17655 ac08be29a374a20d964647227f46efcd 271 SUPERFAMILY SSF52980 103 216 1.55E-23 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JV59_17655 ac08be29a374a20d964647227f46efcd 271 Pfam PF04471 Restriction endonuclease 100 209 2.2E-25 T 14-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 JV59_17655 ac08be29a374a20d964647227f46efcd 271 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 232 270 2.2E-12 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 JV59_33445 43b861e1fed8c01d1a06ce8251413154 328 Gene3D G3DSA:1.10.760.10 39 186 1.0E-112 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_33445 43b861e1fed8c01d1a06ce8251413154 328 Gene3D G3DSA:1.10.760.10 37 310 1.0E-112 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_33445 43b861e1fed8c01d1a06ce8251413154 328 SUPERFAMILY SSF46626 173 323 3.43E-42 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_33445 43b861e1fed8c01d1a06ce8251413154 328 Pfam PF00034 Cytochrome c 195 304 2.8E-11 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_33445 43b861e1fed8c01d1a06ce8251413154 328 Pfam PF03150 Di-haem cytochrome c peroxidase 39 186 1.8E-48 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 JV59_33445 43b861e1fed8c01d1a06ce8251413154 328 SUPERFAMILY SSF46626 21 174 2.83E-48 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_33445 43b861e1fed8c01d1a06ce8251413154 328 PIRSF PIRSF000294 3 328 4.3E-125 T 14-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 JV59_18110 83892294835f83a9809479ad6cd107b6 334 PIRSF PIRSF017617 1 334 1.1E-131 T 14-10-2018 IPR023603 Threonine aldolase JV59_18110 83892294835f83a9809479ad6cd107b6 334 SUPERFAMILY SSF53383 1 332 1.84E-115 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_18110 83892294835f83a9809479ad6cd107b6 334 Gene3D G3DSA:3.40.640.10 1 243 6.7E-96 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_18110 83892294835f83a9809479ad6cd107b6 334 Pfam PF01212 Beta-eliminating lyase 2 283 7.6E-98 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 JV59_18110 83892294835f83a9809479ad6cd107b6 334 Gene3D G3DSA:3.90.1150.10 244 334 9.2E-23 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_18715 aa8cc16796dbab8b75b1db5913c934b3 156 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 2.8E-20 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JV59_18715 aa8cc16796dbab8b75b1db5913c934b3 156 SUPERFAMILY SSF54909 67 148 5.77E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_18715 aa8cc16796dbab8b75b1db5913c934b3 156 SUPERFAMILY SSF46785 2 62 1.49E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_18715 aa8cc16796dbab8b75b1db5913c934b3 156 SMART SM00344 3 112 3.5E-41 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 JV59_18715 aa8cc16796dbab8b75b1db5913c934b3 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.1E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_18715 aa8cc16796dbab8b75b1db5913c934b3 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.1E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_18715 aa8cc16796dbab8b75b1db5913c934b3 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.1E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_18715 aa8cc16796dbab8b75b1db5913c934b3 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 2.4E-19 T 14-10-2018 JV59_18715 aa8cc16796dbab8b75b1db5913c934b3 156 Gene3D G3DSA:1.10.10.10 1 56 2.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_18715 aa8cc16796dbab8b75b1db5913c934b3 156 Gene3D G3DSA:3.30.70.920 57 140 7.5E-21 T 14-10-2018 JV59_23385 2af2f50842cf1555c518d0c2565640bb 267 Pfam PF00248 Aldo/keto reductase family 7 251 9.8E-48 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain JV59_23385 2af2f50842cf1555c518d0c2565640bb 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 115 132 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 JV59_23385 2af2f50842cf1555c518d0c2565640bb 267 PRINTS PR00069 Aldo-keto reductase signature 82 100 2.7E-49 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JV59_23385 2af2f50842cf1555c518d0c2565640bb 267 PRINTS PR00069 Aldo-keto reductase signature 150 179 2.7E-49 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JV59_23385 2af2f50842cf1555c518d0c2565640bb 267 PRINTS PR00069 Aldo-keto reductase signature 26 50 2.7E-49 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JV59_23385 2af2f50842cf1555c518d0c2565640bb 267 PRINTS PR00069 Aldo-keto reductase signature 115 132 2.7E-49 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JV59_23385 2af2f50842cf1555c518d0c2565640bb 267 PRINTS PR00069 Aldo-keto reductase signature 187 211 2.7E-49 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JV59_23385 2af2f50842cf1555c518d0c2565640bb 267 SUPERFAMILY SSF51430 3 262 1.18E-82 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily JV59_23385 2af2f50842cf1555c518d0c2565640bb 267 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 30 47 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 JV59_23385 2af2f50842cf1555c518d0c2565640bb 267 PIRSF PIRSF000097 1 267 5.1E-70 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JV59_23385 2af2f50842cf1555c518d0c2565640bb 267 Gene3D G3DSA:3.20.20.100 1 267 3.3E-89 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily JV59_23265 5253481eb4743a2ed5a48d0c4d48e58b 221 SUPERFAMILY SSF46689 149 214 8.24E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_23265 5253481eb4743a2ed5a48d0c4d48e58b 221 SUPERFAMILY SSF53041 7 143 3.79E-20 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 JV59_23265 5253481eb4743a2ed5a48d0c4d48e58b 221 SMART SM00857 9 140 2.3E-13 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 JV59_23265 5253481eb4743a2ed5a48d0c4d48e58b 221 Pfam PF13384 Homeodomain-like domain 158 199 4.2E-6 T 14-10-2018 JV59_23265 5253481eb4743a2ed5a48d0c4d48e58b 221 Pfam PF00239 Resolvase, N terminal domain 10 141 1.7E-16 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 JV59_23265 5253481eb4743a2ed5a48d0c4d48e58b 221 Gene3D G3DSA:3.40.50.1390 7 130 1.9E-17 T 14-10-2018 JV59_34375 27a51d950ff23887c9b3f515e85193ee 336 SUPERFAMILY SSF51556 4 333 4.02E-90 T 14-10-2018 IPR032466 Metal-dependent hydrolase JV59_34375 27a51d950ff23887c9b3f515e85193ee 336 Gene3D G3DSA:3.20.20.140 1 336 4.4E-105 T 14-10-2018 JV59_34375 27a51d950ff23887c9b3f515e85193ee 336 Pfam PF00962 Adenosine/AMP deaminase 10 327 8.5E-73 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 JV59_34375 27a51d950ff23887c9b3f515e85193ee 336 Hamap MF_01962 Adenine deaminase. 6 318 85.286 T 14-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 JV59_34375 27a51d950ff23887c9b3f515e85193ee 336 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 10 329 2.6E-116 T 14-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 JV59_28080 1f67c0c5277ba8fd98652078f301aea8 451 SUPERFAMILY SSF52172 6 192 1.57E-42 T 14-10-2018 IPR011006 CheY-like superfamily JV59_28080 1f67c0c5277ba8fd98652078f301aea8 451 Gene3D G3DSA:3.40.50.2300 4 139 5.8E-39 T 14-10-2018 JV59_28080 1f67c0c5277ba8fd98652078f301aea8 451 SMART SM00382 168 319 5.9E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_28080 1f67c0c5277ba8fd98652078f301aea8 451 SUPERFAMILY SSF46689 389 444 1.48E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_28080 1f67c0c5277ba8fd98652078f301aea8 451 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JV59_28080 1f67c0c5277ba8fd98652078f301aea8 451 SMART SM00448 7 118 1.6E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_28080 1f67c0c5277ba8fd98652078f301aea8 451 SUPERFAMILY SSF52540 148 370 3.55E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_28080 1f67c0c5277ba8fd98652078f301aea8 451 Gene3D G3DSA:1.10.8.60 317 389 3.5E-13 T 14-10-2018 JV59_28080 1f67c0c5277ba8fd98652078f301aea8 451 Pfam PF02954 Bacterial regulatory protein, Fis family 403 441 8.6E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_28080 1f67c0c5277ba8fd98652078f301aea8 451 Pfam PF00158 Sigma-54 interaction domain 148 311 2.3E-61 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JV59_28080 1f67c0c5277ba8fd98652078f301aea8 451 Gene3D G3DSA:3.40.50.300 140 316 3.5E-54 T 14-10-2018 JV59_28080 1f67c0c5277ba8fd98652078f301aea8 451 Gene3D G3DSA:1.10.10.60 391 446 4.3E-7 T 14-10-2018 JV59_28080 1f67c0c5277ba8fd98652078f301aea8 451 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site JV59_28080 1f67c0c5277ba8fd98652078f301aea8 451 Pfam PF00072 Response regulator receiver domain 9 118 4.3E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_28670 3fca40de0ee33af2a72604dd033e7a20 189 SUPERFAMILY SSF101327 2 179 1.31E-30 T 14-10-2018 IPR036255 YgfB-like superfamily JV59_28670 3fca40de0ee33af2a72604dd033e7a20 189 Pfam PF03695 Uncharacterised protein family (UPF0149) 3 176 1.4E-36 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 JV59_28670 3fca40de0ee33af2a72604dd033e7a20 189 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 2 174 1.2E-45 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 JV59_34460 560b37ce16c4d2b6d2c29aceaae77301 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 7.2E-92 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 JV59_34460 560b37ce16c4d2b6d2c29aceaae77301 255 Pfam PF01026 TatD related DNase 3 253 7.2E-77 T 14-10-2018 IPR001130 TatD family GO:0016788 JV59_34460 560b37ce16c4d2b6d2c29aceaae77301 255 SUPERFAMILY SSF51556 1 253 1.64E-86 T 14-10-2018 IPR032466 Metal-dependent hydrolase JV59_34460 560b37ce16c4d2b6d2c29aceaae77301 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 JV59_34460 560b37ce16c4d2b6d2c29aceaae77301 255 PIRSF PIRSF005902 1 255 4.0E-80 T 14-10-2018 IPR001130 TatD family GO:0016788 JV59_34460 560b37ce16c4d2b6d2c29aceaae77301 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 JV59_34460 560b37ce16c4d2b6d2c29aceaae77301 255 Gene3D G3DSA:3.20.20.140 1 255 1.2E-97 T 14-10-2018 JV59_35455 4ac44cfbd13b76004b16d734d8f59af4 240 SUPERFAMILY SSF55120 2 237 1.01E-61 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_35455 4ac44cfbd13b76004b16d734d8f59af4 240 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_35455 4ac44cfbd13b76004b16d734d8f59af4 240 Gene3D G3DSA:3.30.2350.10 1 225 2.0E-59 T 14-10-2018 JV59_35455 4ac44cfbd13b76004b16d734d8f59af4 240 Pfam PF00849 RNA pseudouridylate synthase 11 170 1.5E-32 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_39135 81731ac70d3a66f88b0465dc77322e45 294 Pfam PF01553 Acyltransferase 73 226 7.9E-16 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JV59_39135 81731ac70d3a66f88b0465dc77322e45 294 SMART SM00563 85 227 5.3E-20 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JV59_39135 81731ac70d3a66f88b0465dc77322e45 294 SUPERFAMILY SSF69593 42 290 2.62E-27 T 14-10-2018 JV59_02785 3a55962ed9f911ccc5fb18e0191eccf0 502 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 490 23.51 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 JV59_02785 3a55962ed9f911ccc5fb18e0191eccf0 502 Pfam PF00795 Carbon-nitrogen hydrolase 221 476 5.4E-39 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 JV59_02785 3a55962ed9f911ccc5fb18e0191eccf0 502 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 452 1.4E-94 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 JV59_02785 3a55962ed9f911ccc5fb18e0191eccf0 502 SUPERFAMILY SSF56317 216 486 3.66E-43 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JV59_02785 3a55962ed9f911ccc5fb18e0191eccf0 502 Gene3D G3DSA:3.60.110.10 207 484 1.2E-16 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JV59_36235 92ad91d3042b12e4cf56a96acd6fdbca 350 SUPERFAMILY SSF54197 6 179 5.11E-73 T 14-10-2018 IPR036265 HIT-like superfamily JV59_36235 92ad91d3042b12e4cf56a96acd6fdbca 350 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 186 349 1.9E-63 T 14-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 JV59_36235 92ad91d3042b12e4cf56a96acd6fdbca 350 Gene3D G3DSA:3.30.428.10 178 350 5.6E-72 T 14-10-2018 IPR036265 HIT-like superfamily JV59_36235 92ad91d3042b12e4cf56a96acd6fdbca 350 PIRSF PIRSF000808 2 345 3.8E-123 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 JV59_36235 92ad91d3042b12e4cf56a96acd6fdbca 350 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 14-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 JV59_36235 92ad91d3042b12e4cf56a96acd6fdbca 350 Gene3D G3DSA:3.30.428.10 46 177 1.6E-55 T 14-10-2018 IPR036265 HIT-like superfamily JV59_36235 92ad91d3042b12e4cf56a96acd6fdbca 350 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 5 349 2.0E-182 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 JV59_36235 92ad91d3042b12e4cf56a96acd6fdbca 350 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 1.1E-67 T 14-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 JV59_36235 92ad91d3042b12e4cf56a96acd6fdbca 350 SUPERFAMILY SSF54197 181 348 3.74E-54 T 14-10-2018 IPR036265 HIT-like superfamily JV59_26110 699591b434c362d7ce9072621666aaeb 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 1.4E-42 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26110 699591b434c362d7ce9072621666aaeb 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.818 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26110 699591b434c362d7ce9072621666aaeb 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26110 699591b434c362d7ce9072621666aaeb 124 PIRSF PIRSF002133 1 124 3.0E-54 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26110 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.1E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26110 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.1E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26110 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.1E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26110 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.1E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26110 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.1E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26110 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.1E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26110 699591b434c362d7ce9072621666aaeb 124 Gene3D G3DSA:2.40.50.140 1 124 6.1E-64 T 14-10-2018 JV59_26110 699591b434c362d7ce9072621666aaeb 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 8.5E-71 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26110 699591b434c362d7ce9072621666aaeb 124 SUPERFAMILY SSF50249 3 123 2.83E-52 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_17835 b3951e3575fb812f56e8b70e72c20983 666 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 11 657 2.5E-241 T 14-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 JV59_17835 b3951e3575fb812f56e8b70e72c20983 666 Gene3D G3DSA:3.30.300.30 539 665 4.8E-14 T 14-10-2018 JV59_17835 b3951e3575fb812f56e8b70e72c20983 666 Gene3D G3DSA:3.40.50.12780 82 535 5.0E-58 T 14-10-2018 JV59_17835 b3951e3575fb812f56e8b70e72c20983 666 Pfam PF00501 AMP-binding enzyme 111 539 4.6E-48 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JV59_17835 b3951e3575fb812f56e8b70e72c20983 666 ProSitePatterns PS00455 Putative AMP-binding domain signature. 284 295 - T 14-10-2018 IPR020845 AMP-binding, conserved site JV59_17835 b3951e3575fb812f56e8b70e72c20983 666 SUPERFAMILY SSF56801 38 657 3.14E-119 T 14-10-2018 JV59_34055 3af33ac99f736a1694f884b3687ef82c 256 PRINTS PR00721 Stomatin signature 73 94 1.4E-62 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JV59_34055 3af33ac99f736a1694f884b3687ef82c 256 PRINTS PR00721 Stomatin signature 108 125 1.4E-62 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JV59_34055 3af33ac99f736a1694f884b3687ef82c 256 PRINTS PR00721 Stomatin signature 128 151 1.4E-62 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JV59_34055 3af33ac99f736a1694f884b3687ef82c 256 PRINTS PR00721 Stomatin signature 26 48 1.4E-62 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JV59_34055 3af33ac99f736a1694f884b3687ef82c 256 PRINTS PR00721 Stomatin signature 196 219 1.4E-62 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JV59_34055 3af33ac99f736a1694f884b3687ef82c 256 PRINTS PR00721 Stomatin signature 171 192 1.4E-62 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JV59_34055 3af33ac99f736a1694f884b3687ef82c 256 PRINTS PR00721 Stomatin signature 152 170 1.4E-62 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JV59_34055 3af33ac99f736a1694f884b3687ef82c 256 SMART SM00244 19 176 1.7E-62 T 14-10-2018 IPR001107 Band 7 domain JV59_34055 3af33ac99f736a1694f884b3687ef82c 256 SUPERFAMILY SSF117892 50 183 6.93E-43 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily JV59_34055 3af33ac99f736a1694f884b3687ef82c 256 Pfam PF01145 SPFH domain / Band 7 family 24 192 6.1E-35 T 14-10-2018 IPR001107 Band 7 domain JV59_34055 3af33ac99f736a1694f884b3687ef82c 256 Gene3D G3DSA:3.30.479.30 47 178 7.2E-48 T 14-10-2018 JV59_30670 2661e4db9aacd0720a4f405bf95d1309 371 Gene3D G3DSA:3.40.50.2000 200 351 2.4E-35 T 14-10-2018 JV59_30670 2661e4db9aacd0720a4f405bf95d1309 371 Pfam PF13692 Glycosyl transferases group 1 232 342 4.8E-7 T 14-10-2018 JV59_30670 2661e4db9aacd0720a4f405bf95d1309 371 SUPERFAMILY SSF53756 153 363 2.83E-17 T 14-10-2018 JV59_21185 bdbf75b064d738dee3869140708a6834 861 Pfam PF13244 Domain of unknown function (DUF4040) 564 628 5.1E-14 T 14-10-2018 IPR025383 Domain of unknown function DUF4040 JV59_21185 bdbf75b064d738dee3869140708a6834 861 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 22 73 6.1E-11 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_21185 bdbf75b064d738dee3869140708a6834 861 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 198 224 3.4E-34 T 14-10-2018 JV59_21185 bdbf75b064d738dee3869140708a6834 861 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 266 278 3.4E-34 T 14-10-2018 JV59_21185 bdbf75b064d738dee3869140708a6834 861 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 63 83 3.4E-34 T 14-10-2018 JV59_21185 bdbf75b064d738dee3869140708a6834 861 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 35 60 3.4E-34 T 14-10-2018 JV59_21185 bdbf75b064d738dee3869140708a6834 861 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 176 197 3.4E-34 T 14-10-2018 JV59_21185 bdbf75b064d738dee3869140708a6834 861 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 733 850 2.6E-25 T 14-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein JV59_21185 bdbf75b064d738dee3869140708a6834 861 Pfam PF00361 Proton-conducting membrane transporter 86 371 6.8E-61 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_29345 8a56466171476b1cb3cfc02e5d31c45c 459 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 60 455 2.0E-110 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 JV59_29345 8a56466171476b1cb3cfc02e5d31c45c 459 Pfam PF11471 Maltoporin periplasmic N-terminal extension 2 51 8.3E-11 T 14-10-2018 IPR021570 LamB-type porin N-terminal domain JV59_29345 8a56466171476b1cb3cfc02e5d31c45c 459 Gene3D G3DSA:2.40.170.10 52 459 2.7E-143 T 14-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 JV59_29345 8a56466171476b1cb3cfc02e5d31c45c 459 SUPERFAMILY SSF56935 54 459 1.37E-108 T 14-10-2018 JV59_29345 8a56466171476b1cb3cfc02e5d31c45c 459 Pfam PF02264 LamB porin 56 459 4.7E-97 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 JV59_05345 500b7b3070f6627741a4ae3bb9c87013 330 Gene3D G3DSA:2.20.150.10 20 115 1.5E-81 T 14-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 JV59_05345 500b7b3070f6627741a4ae3bb9c87013 330 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 268 281 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 JV59_05345 500b7b3070f6627741a4ae3bb9c87013 330 SUPERFAMILY SSF53613 12 324 1.23E-65 T 14-10-2018 IPR029056 Ribokinase-like JV59_05345 500b7b3070f6627741a4ae3bb9c87013 330 Gene3D G3DSA:3.40.1190.20 15 303 1.5E-81 T 14-10-2018 IPR029056 Ribokinase-like JV59_05345 500b7b3070f6627741a4ae3bb9c87013 330 Pfam PF00294 pfkB family carbohydrate kinase 15 316 3.7E-55 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB JV59_05345 500b7b3070f6627741a4ae3bb9c87013 330 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 11 324 6.7E-117 T 14-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 JV59_05345 500b7b3070f6627741a4ae3bb9c87013 330 Hamap MF_01668 5-dehydro-2-deoxygluconokinase [iolC]. 8 328 50.015 T 14-10-2018 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes GO:0016310|GO:0047590 KEGG: 00562+2.7.1.92 JV59_22765 6f067c943769995a54f0fdcc55ecf0d1 121 Pfam PF01042 Endoribonuclease L-PSP 32 115 2.0E-17 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 JV59_22765 6f067c943769995a54f0fdcc55ecf0d1 121 SUPERFAMILY SSF55298 4 117 1.01E-23 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_22765 6f067c943769995a54f0fdcc55ecf0d1 121 Gene3D G3DSA:3.30.1330.40 1 119 1.4E-28 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_19250 0af41e71aa94faa135bcee49875f227d 484 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 29 281 1.3E-75 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 JV59_19250 0af41e71aa94faa135bcee49875f227d 484 Pfam PF01226 Formate/nitrite transporter 17 277 5.6E-71 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 JV59_19250 0af41e71aa94faa135bcee49875f227d 484 SMART SM00116 418 465 0.034 T 14-10-2018 IPR000644 CBS domain JV59_19250 0af41e71aa94faa135bcee49875f227d 484 SMART SM00116 320 368 3.6E-4 T 14-10-2018 IPR000644 CBS domain JV59_19250 0af41e71aa94faa135bcee49875f227d 484 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 85 94 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site JV59_19250 0af41e71aa94faa135bcee49875f227d 484 Gene3D G3DSA:3.10.580.10 308 467 3.3E-25 T 14-10-2018 JV59_19250 0af41e71aa94faa135bcee49875f227d 484 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 16 281 1.5E-112 T 14-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 JV59_19250 0af41e71aa94faa135bcee49875f227d 484 Pfam PF00571 CBS domain 382 464 5.2E-6 T 14-10-2018 IPR000644 CBS domain JV59_19250 0af41e71aa94faa135bcee49875f227d 484 Pfam PF00571 CBS domain 313 364 6.5E-8 T 14-10-2018 IPR000644 CBS domain JV59_19250 0af41e71aa94faa135bcee49875f227d 484 Gene3D G3DSA:1.20.1080.10 4 270 4.8E-87 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 JV59_19250 0af41e71aa94faa135bcee49875f227d 484 SUPERFAMILY SSF54631 312 465 3.05E-24 T 14-10-2018 JV59_19250 0af41e71aa94faa135bcee49875f227d 484 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 170 180 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site JV59_31335 a8f2177cccaf31978bdd06f0201636c3 681 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 33 46 2.5E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JV59_31335 a8f2177cccaf31978bdd06f0201636c3 681 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 181 198 2.5E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JV59_31335 a8f2177cccaf31978bdd06f0201636c3 681 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 232 246 2.5E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JV59_31335 a8f2177cccaf31978bdd06f0201636c3 681 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 70 89 2.5E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JV59_31335 a8f2177cccaf31978bdd06f0201636c3 681 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 132 148 2.5E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JV59_31335 a8f2177cccaf31978bdd06f0201636c3 681 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 151 169 2.5E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JV59_31335 a8f2177cccaf31978bdd06f0201636c3 681 Pfam PF00771 FHIPEP family 27 660 1.8E-212 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JV59_31335 a8f2177cccaf31978bdd06f0201636c3 681 PIRSF PIRSF005419 1 674 2.9E-218 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JV59_31335 a8f2177cccaf31978bdd06f0201636c3 681 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 14 669 1.4E-262 T 14-10-2018 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 JV59_31335 a8f2177cccaf31978bdd06f0201636c3 681 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 137 160 - T 14-10-2018 IPR025505 FHIPEP conserved site JV59_31335 a8f2177cccaf31978bdd06f0201636c3 681 Gene3D G3DSA:1.10.490.80 576 669 2.0E-26 T 14-10-2018 JV59_31335 a8f2177cccaf31978bdd06f0201636c3 681 Gene3D G3DSA:3.40.30.60 349 485 3.1E-5 T 14-10-2018 JV59_31335 a8f2177cccaf31978bdd06f0201636c3 681 Gene3D G3DSA:1.10.8.540 486 572 6.6E-31 T 14-10-2018 JV59_20940 72ea5d1b25e2283bb01c077466bf35a0 266 SUPERFAMILY SSF51215 11 144 5.1E-23 T 14-10-2018 IPR037923 Transcription regulator HTH-like JV59_20940 72ea5d1b25e2283bb01c077466bf35a0 266 Pfam PF02311 AraC-like ligand binding domain 9 122 8.8E-25 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 JV59_20940 72ea5d1b25e2283bb01c077466bf35a0 266 SMART SM00342 176 258 1.9E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_20940 72ea5d1b25e2283bb01c077466bf35a0 266 SUPERFAMILY SSF46689 212 261 1.22E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_20940 72ea5d1b25e2283bb01c077466bf35a0 266 Pfam PF12833 Helix-turn-helix domain 182 259 1.0E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_20940 72ea5d1b25e2283bb01c077466bf35a0 266 Gene3D G3DSA:1.10.10.60 155 264 2.3E-27 T 14-10-2018 JV59_20940 72ea5d1b25e2283bb01c077466bf35a0 266 SUPERFAMILY SSF46689 162 210 2.06E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_19260 5a8aa0755a800c2a53c42b3497d1c2c6 179 Pfam PF01292 Prokaryotic cytochrome b561 8 176 3.5E-31 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 JV59_19260 5a8aa0755a800c2a53c42b3497d1c2c6 179 SUPERFAMILY SSF81342 5 175 2.67E-36 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 JV59_32630 f3c1514928879b0406824f26ec10cffc 259 Gene3D G3DSA:3.30.460.10 24 127 2.5E-11 T 14-10-2018 JV59_32630 f3c1514928879b0406824f26ec10cffc 259 Pfam PF01909 Nucleotidyltransferase domain 34 95 2.0E-7 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 JV59_32630 f3c1514928879b0406824f26ec10cffc 259 SUPERFAMILY SSF81301 35 124 8.56E-12 T 14-10-2018 JV59_16395 6f00a98bd617fbb478b5eb6c5dfac976 304 SUPERFAMILY SSF161098 68 293 5.49E-37 T 14-10-2018 IPR035906 MetI-like superfamily JV59_16395 6f00a98bd617fbb478b5eb6c5dfac976 304 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 67 135 4.2E-15 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 JV59_16395 6f00a98bd617fbb478b5eb6c5dfac976 304 Gene3D G3DSA:1.10.3720.10 59 298 1.2E-45 T 14-10-2018 IPR035906 MetI-like superfamily JV59_16395 6f00a98bd617fbb478b5eb6c5dfac976 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 295 7.9E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 SMART SM00642 1543 1898 2.6E-35 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 SUPERFAMILY SSF81296 510 629 2.66E-22 T 14-10-2018 IPR014756 Immunoglobulin E-set JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 SUPERFAMILY SSF51011 1934 2013 1.1E-7 T 14-10-2018 JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 Gene3D G3DSA:2.60.40.1110 394 507 3.4E-29 T 14-10-2018 JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 SUPERFAMILY SSF103647 222 317 3.79E-11 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 Gene3D G3DSA:3.20.20.80 1532 1887 3.0E-74 T 14-10-2018 JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 Gene3D G3DSA:2.60.40.1180 1329 1412 2.8E-25 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 Gene3D G3DSA:2.60.40.1130 519 628 7.2E-15 T 14-10-2018 JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 Pfam PF11852 Domain of unknown function (DUF3372) 1235 1397 9.1E-58 T 14-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 641 728 1.2E-11 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 SUPERFAMILY SSF51445 1537 1934 2.92E-70 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 SUPERFAMILY SSF103647 317 394 2.75E-11 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 Gene3D G3DSA:2.60.40.10 634 742 2.6E-25 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 Pfam PF03714 Bacterial pullanase-associated domain 406 508 1.3E-17 T 14-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 519 1399 0.0 T 14-10-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 SUPERFAMILY SSF81296 1417 1464 6.06E-6 T 14-10-2018 IPR014756 Immunoglobulin E-set JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 Pfam PF00128 Alpha amylase, catalytic domain 1691 1868 2.9E-15 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 Pfam PF00128 Alpha amylase, catalytic domain 1569 1653 3.8E-25 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 SUPERFAMILY SSF81296 640 745 1.64E-18 T 14-10-2018 IPR014756 Immunoglobulin E-set JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 Gene3D G3DSA:4.10.1080.10 212 314 3.7E-11 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 Gene3D G3DSA:4.10.1080.10 315 393 2.1E-8 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 SUPERFAMILY SSF51445 741 1294 8.24E-125 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 SUPERFAMILY SSF51011 1298 1411 1.11E-37 T 14-10-2018 JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 SUPERFAMILY SSF49452 402 505 2.42E-29 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 Gene3D G3DSA:2.60.40.10 1414 1471 3.5E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 Gene3D G3DSA:3.20.20.80 743 1328 9.6E-209 T 14-10-2018 JV59_20985 19a934419259ee89b62dc0d48ba9c446 2014 Gene3D G3DSA:2.60.40.1180 1928 2012 3.1E-12 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta JV59_38370 d1232c04b90c15149ad49829571772f4 425 SUPERFAMILY SSF51735 173 420 7.64E-81 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_38370 d1232c04b90c15149ad49829571772f4 425 Gene3D G3DSA:3.40.50.720 171 425 6.4E-83 T 14-10-2018 JV59_38370 d1232c04b90c15149ad49829571772f4 425 PIRSF PIRSF000106 49 425 4.7E-73 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JV59_38370 d1232c04b90c15149ad49829571772f4 425 SMART SM01274 28 161 6.2E-71 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 JV59_38370 d1232c04b90c15149ad49829571772f4 425 SUPERFAMILY SSF53223 20 171 1.73E-50 T 14-10-2018 JV59_38370 d1232c04b90c15149ad49829571772f4 425 Pfam PF03949 Malic enzyme, NAD binding domain 175 369 2.1E-26 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 JV59_38370 d1232c04b90c15149ad49829571772f4 425 Pfam PF00390 Malic enzyme, N-terminal domain 35 160 1.7E-25 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 JV59_38370 d1232c04b90c15149ad49829571772f4 425 Gene3D G3DSA:3.40.50.10380 7 170 3.5E-66 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 JV59_38370 d1232c04b90c15149ad49829571772f4 425 SMART SM00919 173 409 7.9E-141 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 JV59_38370 d1232c04b90c15149ad49829571772f4 425 ProSitePatterns PS00331 Malic enzymes signature. 169 185 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 JV59_19200 dcf180bb7e48bb33d8ec392a3f8af538 176 Pfam PF01817 Chorismate mutase type II 25 93 3.2E-7 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JV59_19200 dcf180bb7e48bb33d8ec392a3f8af538 176 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 25 127 7.4E-24 T 14-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JV59_19200 dcf180bb7e48bb33d8ec392a3f8af538 176 Gene3D G3DSA:1.20.140.170 22 176 1.5E-46 T 14-10-2018 JV59_19200 dcf180bb7e48bb33d8ec392a3f8af538 176 SMART SM00830 24 96 1.9E-10 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JV59_19200 dcf180bb7e48bb33d8ec392a3f8af538 176 SUPERFAMILY SSF48600 25 174 1.43E-27 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JV59_20750 fb66bb667cda997b72d8121ea6af06d1 162 SUPERFAMILY SSF55729 1 159 3.54E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_20750 fb66bb667cda997b72d8121ea6af06d1 162 Pfam PF13673 Acetyltransferase (GNAT) domain 83 160 1.5E-8 T 14-10-2018 IPR000182 GNAT domain JV59_20750 fb66bb667cda997b72d8121ea6af06d1 162 Gene3D G3DSA:3.40.630.30 1 159 1.4E-32 T 14-10-2018 JV59_36790 63b51bccd781cd8e8e2658a846e00957 427 SUPERFAMILY SSF53686 1 425 8.64E-131 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JV59_36790 63b51bccd781cd8e8e2658a846e00957 427 Gene3D G3DSA:3.90.1380.10 1 79 1.6E-31 T 14-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily JV59_36790 63b51bccd781cd8e8e2658a846e00957 427 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 89 366 1.5E-22 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme JV59_36790 63b51bccd781cd8e8e2658a846e00957 427 Pfam PF14821 Threonine synthase N terminus 8 78 1.5E-8 T 14-10-2018 IPR029144 Threonine synthase, N-terminal JV59_36790 63b51bccd781cd8e8e2658a846e00957 427 TIGRFAM TIGR00260 thrC: threonine synthase 51 389 2.7E-114 T 14-10-2018 IPR004450 Threonine synthase-like JV59_36790 63b51bccd781cd8e8e2658a846e00957 427 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 JV59_36790 63b51bccd781cd8e8e2658a846e00957 427 Gene3D G3DSA:3.40.50.1100 83 392 3.8E-137 T 14-10-2018 JV59_36790 63b51bccd781cd8e8e2658a846e00957 427 Gene3D G3DSA:3.40.50.1100 101 399 3.8E-137 T 14-10-2018 JV59_32690 c2a77c45ffcfb8e3c54cafc1f95f713a 128 SUPERFAMILY SSF54427 4 115 2.02E-13 T 14-10-2018 IPR032710 NTF2-like domain superfamily JV59_32690 c2a77c45ffcfb8e3c54cafc1f95f713a 128 Gene3D G3DSA:3.10.450.50 4 116 5.1E-8 T 14-10-2018 JV59_32690 c2a77c45ffcfb8e3c54cafc1f95f713a 128 Pfam PF14534 Domain of unknown function (DUF4440) 11 109 5.5E-11 T 14-10-2018 IPR027843 Domain of unknown function DUF4440 JV59_19660 66d06e023a7f338b15aa18857f79d996 149 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 12 135 6.6E-37 T 14-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN JV59_19660 66d06e023a7f338b15aa18857f79d996 149 Gene3D G3DSA:2.60.40.4150 11 146 7.5E-33 T 14-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily JV59_19660 66d06e023a7f338b15aa18857f79d996 149 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 15 132 1.0E-30 T 14-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN JV59_02060 e41c5482653815772720d38857780196 486 Gene3D G3DSA:3.90.190.20 326 485 1.9E-48 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JV59_02060 e41c5482653815772720d38857780196 486 Gene3D G3DSA:3.40.1190.10 111 325 1.3E-84 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JV59_02060 e41c5482653815772720d38857780196 486 SUPERFAMILY SSF53623 108 322 2.22E-72 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JV59_02060 e41c5482653815772720d38857780196 486 Gene3D G3DSA:3.40.50.720 23 110 9.0E-34 T 14-10-2018 JV59_02060 e41c5482653815772720d38857780196 486 Pfam PF08245 Mur ligase middle domain 127 307 4.9E-29 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 JV59_02060 e41c5482653815772720d38857780196 486 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 25 473 1.9E-187 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JV59_02060 e41c5482653815772720d38857780196 486 Pfam PF01225 Mur ligase family, catalytic domain 25 121 3.2E-29 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 JV59_02060 e41c5482653815772720d38857780196 486 SUPERFAMILY SSF53244 326 474 4.21E-48 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JV59_02060 e41c5482653815772720d38857780196 486 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 417 9.8E-22 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 JV59_02060 e41c5482653815772720d38857780196 486 SUPERFAMILY SSF51984 23 109 4.58E-28 T 14-10-2018 JV59_02060 e41c5482653815772720d38857780196 486 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 479 43.404 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JV59_00775 c4d5f976f8d2a2306838f4b81e8b0515 481 Gene3D G3DSA:3.30.2290.10 9 235 4.8E-14 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal JV59_00775 c4d5f976f8d2a2306838f4b81e8b0515 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 2.9E-65 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 JV59_00775 c4d5f976f8d2a2306838f4b81e8b0515 481 PIRSF PIRSF004919 15 481 9.0E-146 T 14-10-2018 IPR025502 TldD JV59_00775 c4d5f976f8d2a2306838f4b81e8b0515 481 SUPERFAMILY SSF111283 18 480 6.67E-128 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 JV59_26720 d5730a79b3f74c42fb3e887df5f2b280 258 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 258 53.039 T 14-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 JV59_26720 d5730a79b3f74c42fb3e887df5f2b280 258 SUPERFAMILY SSF51569 6 245 2.3E-82 T 14-10-2018 JV59_26720 d5730a79b3f74c42fb3e887df5f2b280 258 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 230 1.7E-80 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 JV59_26720 d5730a79b3f74c42fb3e887df5f2b280 258 Pfam PF01791 DeoC/LacD family aldolase 11 239 2.0E-48 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 JV59_26720 d5730a79b3f74c42fb3e887df5f2b280 258 Gene3D G3DSA:3.20.20.70 1 257 2.4E-100 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_26720 d5730a79b3f74c42fb3e887df5f2b280 258 PIRSF PIRSF001357 5 252 3.7E-75 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 JV59_26720 d5730a79b3f74c42fb3e887df5f2b280 258 SMART SM01133 10 244 2.2E-78 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 JV59_22410 f657556d6c36a488407da7f6b0a540db 336 SUPERFAMILY SSF52317 3 164 3.57E-44 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_22410 f657556d6c36a488407da7f6b0a540db 336 Gene3D G3DSA:3.50.30.60 167 335 5.1E-50 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily JV59_22410 f657556d6c36a488407da7f6b0a540db 336 SUPERFAMILY SSF141986 182 326 1.96E-39 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily JV59_22410 f657556d6c36a488407da7f6b0a540db 336 Pfam PF02016 LD-carboxypeptidase 15 320 3.3E-71 T 14-10-2018 IPR003507 Peptidase family S66 JV59_22410 f657556d6c36a488407da7f6b0a540db 336 PIRSF PIRSF028757 3 335 9.5E-89 T 14-10-2018 IPR003507 Peptidase family S66 JV59_22410 f657556d6c36a488407da7f6b0a540db 336 Gene3D G3DSA:3.40.50.10740 2 166 4.1E-60 T 14-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal JV59_20025 e0919ab062ab5d9dc26e493f8e272d23 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JV59_20025 e0919ab062ab5d9dc26e493f8e272d23 198 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 198 94.415 T 14-10-2018 IPR017757 Transcriptional repressor BetI JV59_20025 e0919ab062ab5d9dc26e493f8e272d23 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 1.5E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_20025 e0919ab062ab5d9dc26e493f8e272d23 198 SUPERFAMILY SSF46689 5 80 7.7E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_20025 e0919ab062ab5d9dc26e493f8e272d23 198 Gene3D G3DSA:1.10.357.10 5 195 1.2E-43 T 14-10-2018 JV59_20025 e0919ab062ab5d9dc26e493f8e272d23 198 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 85 192 4.0E-31 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal JV59_20025 e0919ab062ab5d9dc26e493f8e272d23 198 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 2.5E-74 T 14-10-2018 IPR017757 Transcriptional repressor BetI JV59_20025 e0919ab062ab5d9dc26e493f8e272d23 198 SUPERFAMILY SSF48498 102 192 1.07E-15 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JV59_21660 4c1cd94b84512d0ee554d914433cb54b 389 SUPERFAMILY SSF81901 79 283 6.8E-30 T 14-10-2018 JV59_21660 4c1cd94b84512d0ee554d914433cb54b 389 Gene3D G3DSA:1.25.40.10 18 318 2.7E-33 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_21660 4c1cd94b84512d0ee554d914433cb54b 389 Pfam PF08238 Sel1 repeat 83 97 0.23 T 14-10-2018 IPR006597 Sel1-like repeat JV59_21660 4c1cd94b84512d0ee554d914433cb54b 389 Pfam PF08238 Sel1 repeat 211 242 8.5E-4 T 14-10-2018 IPR006597 Sel1-like repeat JV59_21660 4c1cd94b84512d0ee554d914433cb54b 389 Pfam PF08238 Sel1 repeat 172 204 5.9 T 14-10-2018 IPR006597 Sel1-like repeat JV59_21660 4c1cd94b84512d0ee554d914433cb54b 389 Pfam PF08238 Sel1 repeat 140 170 0.0013 T 14-10-2018 IPR006597 Sel1-like repeat JV59_21660 4c1cd94b84512d0ee554d914433cb54b 389 SMART SM00671 67 97 260.0 T 14-10-2018 IPR006597 Sel1-like repeat JV59_21660 4c1cd94b84512d0ee554d914433cb54b 389 SMART SM00671 207 242 0.016 T 14-10-2018 IPR006597 Sel1-like repeat JV59_21660 4c1cd94b84512d0ee554d914433cb54b 389 SMART SM00671 135 170 0.61 T 14-10-2018 IPR006597 Sel1-like repeat JV59_21660 4c1cd94b84512d0ee554d914433cb54b 389 SMART SM00671 243 276 89.0 T 14-10-2018 IPR006597 Sel1-like repeat JV59_21660 4c1cd94b84512d0ee554d914433cb54b 389 SMART SM00671 171 206 0.78 T 14-10-2018 IPR006597 Sel1-like repeat JV59_20785 471b24ac50de3e5290d65abb2571ce82 438 Gene3D G3DSA:2.40.420.20 362 424 2.2E-34 T 14-10-2018 JV59_20785 471b24ac50de3e5290d65abb2571ce82 438 Gene3D G3DSA:2.40.30.170 60 361 2.2E-34 T 14-10-2018 JV59_20785 471b24ac50de3e5290d65abb2571ce82 438 Gene3D G3DSA:1.10.287.470 103 218 2.2E-34 T 14-10-2018 JV59_20785 471b24ac50de3e5290d65abb2571ce82 438 Gene3D G3DSA:2.40.50.100 66 252 2.2E-34 T 14-10-2018 JV59_20785 471b24ac50de3e5290d65abb2571ce82 438 SUPERFAMILY SSF111369 60 356 1.96E-7 T 14-10-2018 JV59_31665 fedf8fdee022ea429f12c0b73962b997 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 JV59_31665 fedf8fdee022ea429f12c0b73962b997 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 1.7E-89 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 JV59_31665 fedf8fdee022ea429f12c0b73962b997 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 JV59_31665 fedf8fdee022ea429f12c0b73962b997 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 2.8E-147 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 JV59_31665 fedf8fdee022ea429f12c0b73962b997 336 Gene3D G3DSA:3.20.20.70 2 336 1.5E-141 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_31665 fedf8fdee022ea429f12c0b73962b997 336 SUPERFAMILY SSF51395 1 336 1.8E-106 T 14-10-2018 JV59_31665 fedf8fdee022ea429f12c0b73962b997 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.13 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 JV59_31665 fedf8fdee022ea429f12c0b73962b997 336 PIRSF PIRSF000164 10 336 3.2E-103 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 JV59_15975 36a1a527cab3b903362e4731d110bfb0 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 72 1.2E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_15975 36a1a527cab3b903362e4731d110bfb0 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 2.6E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_15975 36a1a527cab3b903362e4731d110bfb0 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 2.6E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_15975 36a1a527cab3b903362e4731d110bfb0 224 SUPERFAMILY SSF48008 78 214 1.86E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JV59_15975 36a1a527cab3b903362e4731d110bfb0 224 SMART SM00895 82 207 7.1E-17 T 14-10-2018 IPR011711 GntR, C-terminal JV59_15975 36a1a527cab3b903362e4731d110bfb0 224 Gene3D G3DSA:1.20.120.530 77 222 1.6E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JV59_15975 36a1a527cab3b903362e4731d110bfb0 224 Pfam PF07729 FCD domain 82 206 5.9E-24 T 14-10-2018 IPR011711 GntR, C-terminal JV59_15975 36a1a527cab3b903362e4731d110bfb0 224 SMART SM00345 14 72 5.9E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_15975 36a1a527cab3b903362e4731d110bfb0 224 Gene3D G3DSA:1.10.10.10 1 73 2.8E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_15975 36a1a527cab3b903362e4731d110bfb0 224 SUPERFAMILY SSF46785 9 76 1.27E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_31175 7f270eb9c6c7284b09fcf17f6d6a5ce5 926 Gene3D G3DSA:3.30.565.10 468 622 1.4E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_31175 7f270eb9c6c7284b09fcf17f6d6a5ce5 926 SMART SM00304 324 376 0.0075 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_31175 7f270eb9c6c7284b09fcf17f6d6a5ce5 926 SMART SM00448 698 812 5.0E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_31175 7f270eb9c6c7284b09fcf17f6d6a5ce5 926 SUPERFAMILY SSF55874 456 620 1.57E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_31175 7f270eb9c6c7284b09fcf17f6d6a5ce5 926 Pfam PF00072 Response regulator receiver domain 700 812 3.2E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_31175 7f270eb9c6c7284b09fcf17f6d6a5ce5 926 PRINTS PR00344 Bacterial sensor protein C-terminal signature 550 564 1.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_31175 7f270eb9c6c7284b09fcf17f6d6a5ce5 926 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 599 1.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_31175 7f270eb9c6c7284b09fcf17f6d6a5ce5 926 PRINTS PR00344 Bacterial sensor protein C-terminal signature 568 578 1.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_31175 7f270eb9c6c7284b09fcf17f6d6a5ce5 926 PRINTS PR00344 Bacterial sensor protein C-terminal signature 605 618 1.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_31175 7f270eb9c6c7284b09fcf17f6d6a5ce5 926 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 515 620 8.5E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_31175 7f270eb9c6c7284b09fcf17f6d6a5ce5 926 SUPERFAMILY SSF47226 795 922 1.28E-12 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_31175 7f270eb9c6c7284b09fcf17f6d6a5ce5 926 Gene3D G3DSA:1.10.287.130 367 465 4.7E-25 T 14-10-2018 JV59_31175 7f270eb9c6c7284b09fcf17f6d6a5ce5 926 SUPERFAMILY SSF52172 697 818 2.7E-30 T 14-10-2018 IPR011006 CheY-like superfamily JV59_31175 7f270eb9c6c7284b09fcf17f6d6a5ce5 926 SMART SM00388 402 467 7.3E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_31175 7f270eb9c6c7284b09fcf17f6d6a5ce5 926 Gene3D G3DSA:1.20.120.160 838 925 3.5E-11 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_31175 7f270eb9c6c7284b09fcf17f6d6a5ce5 926 SUPERFAMILY SSF47384 387 468 2.55E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_31175 7f270eb9c6c7284b09fcf17f6d6a5ce5 926 Pfam PF01627 Hpt domain 843 922 1.3E-8 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 JV59_31175 7f270eb9c6c7284b09fcf17f6d6a5ce5 926 Gene3D G3DSA:3.40.50.2300 696 819 1.3E-30 T 14-10-2018 JV59_31175 7f270eb9c6c7284b09fcf17f6d6a5ce5 926 SMART SM00387 514 621 2.5E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_31175 7f270eb9c6c7284b09fcf17f6d6a5ce5 926 Pfam PF00512 His Kinase A (phospho-acceptor) domain 403 466 6.0E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_40580 d143857231cbbc074c5ab408ff321184 414 Pfam PF07690 Major Facilitator Superfamily 24 357 3.8E-30 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_40580 d143857231cbbc074c5ab408ff321184 414 Gene3D G3DSA:1.20.1250.20 215 411 4.1E-14 T 14-10-2018 JV59_40580 d143857231cbbc074c5ab408ff321184 414 Gene3D G3DSA:1.20.1250.20 6 214 2.4E-22 T 14-10-2018 JV59_40580 d143857231cbbc074c5ab408ff321184 414 SUPERFAMILY SSF103473 18 404 9.16E-45 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_22560 aae4efe08fb1b8e3e59334f76bf30861 481 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 194 357 3.1E-50 T 14-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 JV59_22560 aae4efe08fb1b8e3e59334f76bf30861 481 SUPERFAMILY SSF55447 362 472 2.88E-36 T 14-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily JV59_22560 aae4efe08fb1b8e3e59334f76bf30861 481 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 71 2.3E-5 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JV59_22560 aae4efe08fb1b8e3e59334f76bf30861 481 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 JV59_22560 aae4efe08fb1b8e3e59334f76bf30861 481 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 2 466 3.8E-204 T 14-10-2018 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999|Reactome: R-HSA-74259|Reactome: R-HSA-8851680 JV59_22560 aae4efe08fb1b8e3e59334f76bf30861 481 SUPERFAMILY SSF54292 2 85 1.62E-18 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JV59_22560 aae4efe08fb1b8e3e59334f76bf30861 481 SUPERFAMILY SSF56176 176 357 1.2E-51 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JV59_22560 aae4efe08fb1b8e3e59334f76bf30861 481 Gene3D G3DSA:3.30.365.10 1 480 4.7E-151 T 14-10-2018 JV59_22560 aae4efe08fb1b8e3e59334f76bf30861 481 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 365 465 2.6E-34 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal JV59_22560 aae4efe08fb1b8e3e59334f76bf30861 481 SUPERFAMILY SSF47741 92 163 5.5E-33 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily JV59_22560 aae4efe08fb1b8e3e59334f76bf30861 481 PIRSF PIRSF036557 1 480 8.3E-197 T 14-10-2018 IPR012175 Xanthine dehydrogenase, small subunit, bacteria JV59_22560 aae4efe08fb1b8e3e59334f76bf30861 481 Pfam PF01799 [2Fe-2S] binding domain 81 153 2.2E-31 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 JV59_22560 aae4efe08fb1b8e3e59334f76bf30861 481 SMART SM01092 365 466 8.9E-34 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal JV59_36680 841c809b8e67b52eba3427f8508ecfa3 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 3.2E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_36680 841c809b8e67b52eba3427f8508ecfa3 296 Pfam PF03466 LysR substrate binding domain 97 288 3.4E-11 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_36680 841c809b8e67b52eba3427f8508ecfa3 296 SUPERFAMILY SSF46785 2 85 5.05E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_36680 841c809b8e67b52eba3427f8508ecfa3 296 SUPERFAMILY SSF53850 90 288 2.48E-24 T 14-10-2018 JV59_36680 841c809b8e67b52eba3427f8508ecfa3 296 Gene3D G3DSA:3.40.190.290 95 291 5.5E-9 T 14-10-2018 JV59_36680 841c809b8e67b52eba3427f8508ecfa3 296 Gene3D G3DSA:1.10.10.10 4 92 7.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_01705 ff36f69a503bbebaa561efa55d524c0e 476 Gene3D G3DSA:3.40.710.10 23 85 1.7E-7 T 14-10-2018 JV59_01705 ff36f69a503bbebaa561efa55d524c0e 476 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 47 436 3.6E-98 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JV59_01705 ff36f69a503bbebaa561efa55d524c0e 476 Gene3D G3DSA:3.50.80.20 86 174 1.3E-11 T 14-10-2018 JV59_01705 ff36f69a503bbebaa561efa55d524c0e 476 Gene3D G3DSA:3.40.710.10 237 469 5.5E-49 T 14-10-2018 JV59_01705 ff36f69a503bbebaa561efa55d524c0e 476 SUPERFAMILY SSF56601 26 457 1.52E-84 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JV59_01705 ff36f69a503bbebaa561efa55d524c0e 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 276 298 2.0E-27 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JV59_01705 ff36f69a503bbebaa561efa55d524c0e 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 57 76 2.0E-27 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JV59_01705 ff36f69a503bbebaa561efa55d524c0e 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 414 427 2.0E-27 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JV59_01705 ff36f69a503bbebaa561efa55d524c0e 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 350 364 2.0E-27 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JV59_01705 ff36f69a503bbebaa561efa55d524c0e 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 335 349 2.0E-27 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JV59_01705 ff36f69a503bbebaa561efa55d524c0e 476 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 30 445 2.0E-98 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JV59_36820 c732ca69271e0f07129bf49ca2c89947 238 Pfam PF00072 Response regulator receiver domain 6 113 1.7E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_36820 c732ca69271e0f07129bf49ca2c89947 238 SMART SM00448 4 114 5.5E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_36820 c732ca69271e0f07129bf49ca2c89947 238 Gene3D G3DSA:1.10.10.10 123 236 1.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_36820 c732ca69271e0f07129bf49ca2c89947 238 SUPERFAMILY SSF52172 2 125 2.56E-36 T 14-10-2018 IPR011006 CheY-like superfamily JV59_36820 c732ca69271e0f07129bf49ca2c89947 238 Gene3D G3DSA:3.40.50.2300 1 122 2.2E-33 T 14-10-2018 JV59_36820 c732ca69271e0f07129bf49ca2c89947 238 SUPERFAMILY SSF46894 137 233 1.73E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_36820 c732ca69271e0f07129bf49ca2c89947 238 SMART SM00862 156 232 1.4E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_36820 c732ca69271e0f07129bf49ca2c89947 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 232 4.1E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_36200 4ad899bcc00486ba046878a206747827 280 Gene3D G3DSA:1.10.10.60 229 280 3.9E-18 T 14-10-2018 JV59_36200 4ad899bcc00486ba046878a206747827 280 Pfam PF12833 Helix-turn-helix domain 201 279 2.1E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_36200 4ad899bcc00486ba046878a206747827 280 SUPERFAMILY SSF46689 181 228 4.03E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_36200 4ad899bcc00486ba046878a206747827 280 SMART SM00342 195 278 1.7E-32 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_36200 4ad899bcc00486ba046878a206747827 280 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 232 274 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JV59_36200 4ad899bcc00486ba046878a206747827 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 247 262 1.7E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_36200 4ad899bcc00486ba046878a206747827 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 278 1.7E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_36200 4ad899bcc00486ba046878a206747827 280 Gene3D G3DSA:1.10.10.60 177 228 1.5E-13 T 14-10-2018 JV59_36200 4ad899bcc00486ba046878a206747827 280 SUPERFAMILY SSF46689 231 279 2.72E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_34865 0de98ab074dfdfa23cb74988eed81134 707 SUPERFAMILY SSF48179 497 596 8.5E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JV59_34865 0de98ab074dfdfa23cb74988eed81134 707 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 JV59_34865 0de98ab074dfdfa23cb74988eed81134 707 Gene3D G3DSA:3.90.226.10 1 306 1.6E-97 T 14-10-2018 JV59_34865 0de98ab074dfdfa23cb74988eed81134 707 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 706 52.807 T 14-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 JV59_34865 0de98ab074dfdfa23cb74988eed81134 707 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 217 1.1E-40 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JV59_34865 0de98ab074dfdfa23cb74988eed81134 707 SUPERFAMILY SSF48179 614 707 4.34E-26 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JV59_34865 0de98ab074dfdfa23cb74988eed81134 707 SUPERFAMILY SSF52096 3 305 6.42E-67 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JV59_34865 0de98ab074dfdfa23cb74988eed81134 707 Gene3D G3DSA:1.10.1040.50 500 700 2.9E-72 T 14-10-2018 JV59_34865 0de98ab074dfdfa23cb74988eed81134 707 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 519 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 JV59_34865 0de98ab074dfdfa23cb74988eed81134 707 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 495 8.8E-54 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 JV59_34865 0de98ab074dfdfa23cb74988eed81134 707 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 706 0.0 T 14-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 JV59_34865 0de98ab074dfdfa23cb74988eed81134 707 Gene3D G3DSA:3.40.50.720 307 499 1.1E-57 T 14-10-2018 JV59_34865 0de98ab074dfdfa23cb74988eed81134 707 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 590 4.4E-25 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 JV59_34865 0de98ab074dfdfa23cb74988eed81134 707 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 618 692 1.7E-5 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 JV59_34865 0de98ab074dfdfa23cb74988eed81134 707 SUPERFAMILY SSF51735 313 495 4.9E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_29430 21254542a126afb5277401c2a9d2efb0 638 Gene3D G3DSA:2.20.150.10 16 111 5.3E-91 T 14-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 JV59_29430 21254542a126afb5277401c2a9d2efb0 638 Gene3D G3DSA:3.40.1190.20 11 314 5.3E-91 T 14-10-2018 IPR029056 Ribokinase-like JV59_29430 21254542a126afb5277401c2a9d2efb0 638 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 276 289 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 JV59_29430 21254542a126afb5277401c2a9d2efb0 638 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 327 634 3.2E-146 T 14-10-2018 IPR018659 Protein of unknown function DUF2090 JV59_29430 21254542a126afb5277401c2a9d2efb0 638 Gene3D G3DSA:3.20.20.70 344 637 4.2E-52 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_29430 21254542a126afb5277401c2a9d2efb0 638 Pfam PF00294 pfkB family carbohydrate kinase 9 324 4.0E-46 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB JV59_29430 21254542a126afb5277401c2a9d2efb0 638 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 7 332 8.8E-131 T 14-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 JV59_29430 21254542a126afb5277401c2a9d2efb0 638 SUPERFAMILY SSF53613 7 332 3.27E-72 T 14-10-2018 IPR029056 Ribokinase-like JV59_37550 2929f7d3bb08cb782f70eb834efa21c4 258 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 38 248 4.0E-86 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 JV59_37550 2929f7d3bb08cb782f70eb834efa21c4 258 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 26 247 8.6E-91 T 14-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 JV59_37550 2929f7d3bb08cb782f70eb834efa21c4 258 SUPERFAMILY SSF52402 26 213 1.56E-55 T 14-10-2018 JV59_37550 2929f7d3bb08cb782f70eb834efa21c4 258 Gene3D G3DSA:3.40.50.620 8 221 7.8E-66 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_37550 2929f7d3bb08cb782f70eb834efa21c4 258 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 53 224 2.7E-50 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 JV59_37550 2929f7d3bb08cb782f70eb834efa21c4 258 PIRSF PIRSF000857 6 253 4.9E-58 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 JV59_37550 2929f7d3bb08cb782f70eb834efa21c4 258 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 14 248 39.521 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 JV59_30090 897df533854f3eeffaf1632e302626d1 299 Pfam PF03466 LysR substrate binding domain 91 294 3.6E-22 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_30090 897df533854f3eeffaf1632e302626d1 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 4.7E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_30090 897df533854f3eeffaf1632e302626d1 299 SUPERFAMILY SSF46785 7 91 3.36E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_30090 897df533854f3eeffaf1632e302626d1 299 SUPERFAMILY SSF53850 92 293 1.21E-25 T 14-10-2018 JV59_30090 897df533854f3eeffaf1632e302626d1 299 Gene3D G3DSA:3.40.190.290 94 295 5.0E-39 T 14-10-2018 JV59_30090 897df533854f3eeffaf1632e302626d1 299 Gene3D G3DSA:1.10.10.10 6 93 9.8E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_16080 3f0ea454387491bc504a0cb005b78d2e 884 Gene3D G3DSA:2.10.10.20 5 78 1.2E-9 T 14-10-2018 JV59_16080 3f0ea454387491bc504a0cb005b78d2e 884 Gene3D G3DSA:2.10.10.20 130 183 2.2E-13 T 14-10-2018 JV59_16080 3f0ea454387491bc504a0cb005b78d2e 884 SMART SM00495 138 179 6.8E-5 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_16080 3f0ea454387491bc504a0cb005b78d2e 884 SMART SM00495 23 72 1.1E-5 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_16080 3f0ea454387491bc504a0cb005b78d2e 884 Pfam PF02839 Carbohydrate binding domain 41 69 6.8E-5 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_16080 3f0ea454387491bc504a0cb005b78d2e 884 SUPERFAMILY SSF51055 20 74 8.83E-9 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_16080 3f0ea454387491bc504a0cb005b78d2e 884 Pfam PF14600 Cellulose-binding domain 129 183 6.1E-17 T 14-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 JV59_16080 3f0ea454387491bc504a0cb005b78d2e 884 SUPERFAMILY SSF51055 134 183 5.89E-14 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_00375 1758264edc6c56667d01d6b9249dcb34 315 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 295 2.3E-116 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 JV59_00375 1758264edc6c56667d01d6b9249dcb34 315 Gene3D G3DSA:3.40.50.300 12 292 2.1E-108 T 14-10-2018 JV59_00375 1758264edc6c56667d01d6b9249dcb34 315 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 301 29.896 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 JV59_00375 1758264edc6c56667d01d6b9249dcb34 315 Pfam PF01715 IPP transferase 42 287 3.5E-86 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 JV59_00375 1758264edc6c56667d01d6b9249dcb34 315 SUPERFAMILY SSF52540 10 152 5.4E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_00375 1758264edc6c56667d01d6b9249dcb34 315 Gene3D G3DSA:1.10.20.140 115 186 2.1E-108 T 14-10-2018 JV59_29405 18d7bd71ae6507d7e0980e9b47035ee7 569 Gene3D G3DSA:3.30.43.10 1 97 9.9E-13 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 JV59_29405 18d7bd71ae6507d7e0980e9b47035ee7 569 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 4 564 54.497 T 14-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 JV59_29405 18d7bd71ae6507d7e0980e9b47035ee7 569 Pfam PF09330 D-lactate dehydrogenase, membrane binding 274 562 2.5E-134 T 14-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 JV59_29405 18d7bd71ae6507d7e0980e9b47035ee7 569 Gene3D G3DSA:3.30.70.610 364 430 2.3E-16 T 14-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 JV59_29405 18d7bd71ae6507d7e0980e9b47035ee7 569 Gene3D G3DSA:3.30.70.610 264 344 1.2E-15 T 14-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 JV59_29405 18d7bd71ae6507d7e0980e9b47035ee7 569 Gene3D G3DSA:3.30.1370.20 431 515 7.0E-40 T 14-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 JV59_29405 18d7bd71ae6507d7e0980e9b47035ee7 569 PIRSF PIRSF000101 1 566 1.0E-281 T 14-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 JV59_29405 18d7bd71ae6507d7e0980e9b47035ee7 569 SUPERFAMILY SSF56176 4 266 1.47E-64 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JV59_29405 18d7bd71ae6507d7e0980e9b47035ee7 569 SUPERFAMILY SSF55103 271 561 1.7E-103 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 JV59_29405 18d7bd71ae6507d7e0980e9b47035ee7 569 Gene3D G3DSA:3.30.465.10 100 263 3.7E-72 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JV59_29405 18d7bd71ae6507d7e0980e9b47035ee7 569 Pfam PF01565 FAD binding domain 41 164 2.7E-8 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 JV59_34470 75b93f2d5a71d766ab98a08e41a2c683 209 ProSitePatterns PS01331 Thymidylate kinase signature. 96 108 - T 14-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 JV59_34470 75b93f2d5a71d766ab98a08e41a2c683 209 Gene3D G3DSA:3.40.50.300 4 209 1.6E-63 T 14-10-2018 JV59_34470 75b93f2d5a71d766ab98a08e41a2c683 209 SUPERFAMILY SSF52540 1 208 4.37E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_34470 75b93f2d5a71d766ab98a08e41a2c683 209 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 199 2.7E-62 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 JV59_34470 75b93f2d5a71d766ab98a08e41a2c683 209 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 27.039 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 JV59_34470 75b93f2d5a71d766ab98a08e41a2c683 209 Pfam PF02223 Thymidylate kinase 9 199 8.5E-56 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 JV59_36750 16aaca90e31bec47ef21e058f10a4a61 137 SUPERFAMILY SSF46785 4 135 4.49E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_36750 16aaca90e31bec47ef21e058f10a4a61 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 7.1E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_36750 16aaca90e31bec47ef21e058f10a4a61 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 7.1E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_36750 16aaca90e31bec47ef21e058f10a4a61 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 7.1E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_36750 16aaca90e31bec47ef21e058f10a4a61 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 7.1E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_36750 16aaca90e31bec47ef21e058f10a4a61 137 Pfam PF01047 MarR family 31 88 4.8E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_36750 16aaca90e31bec47ef21e058f10a4a61 137 Gene3D G3DSA:1.10.10.10 2 136 1.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_36750 16aaca90e31bec47ef21e058f10a4a61 137 SMART SM00347 19 124 2.5E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_19205 0741f90aef9114fe71485fa03ad38684 825 Gene3D G3DSA:3.30.70.270 392 561 3.5E-50 T 14-10-2018 JV59_19205 0741f90aef9114fe71485fa03ad38684 825 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 394 557 2.7E-40 T 14-10-2018 IPR000160 GGDEF domain JV59_19205 0741f90aef9114fe71485fa03ad38684 825 SMART SM00267 387 558 2.8E-53 T 14-10-2018 IPR000160 GGDEF domain JV59_19205 0741f90aef9114fe71485fa03ad38684 825 SUPERFAMILY SSF141868 573 821 3.14E-81 T 14-10-2018 IPR035919 EAL domain superfamily JV59_19205 0741f90aef9114fe71485fa03ad38684 825 SMART SM00052 568 814 3.6E-97 T 14-10-2018 IPR001633 EAL domain JV59_19205 0741f90aef9114fe71485fa03ad38684 825 Pfam PF00990 Diguanylate cyclase, GGDEF domain 398 552 5.6E-41 T 14-10-2018 IPR000160 GGDEF domain JV59_19205 0741f90aef9114fe71485fa03ad38684 825 SMART SM01049 74 167 9.3E-16 T 14-10-2018 IPR033480 Single Cache domain 2 JV59_19205 0741f90aef9114fe71485fa03ad38684 825 SMART SM01049 214 275 0.79 T 14-10-2018 IPR033480 Single Cache domain 2 JV59_19205 0741f90aef9114fe71485fa03ad38684 825 Gene3D G3DSA:3.30.450.20 63 226 2.1E-33 T 14-10-2018 JV59_19205 0741f90aef9114fe71485fa03ad38684 825 Pfam PF00563 EAL domain 574 809 1.0E-67 T 14-10-2018 IPR001633 EAL domain JV59_19205 0741f90aef9114fe71485fa03ad38684 825 Gene3D G3DSA:3.20.20.450 569 821 1.6E-87 T 14-10-2018 IPR035919 EAL domain superfamily JV59_19205 0741f90aef9114fe71485fa03ad38684 825 Gene3D G3DSA:3.30.450.20 227 330 9.7E-18 T 14-10-2018 JV59_19205 0741f90aef9114fe71485fa03ad38684 825 SUPERFAMILY SSF55073 403 559 2.88E-44 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_19205 0741f90aef9114fe71485fa03ad38684 825 Pfam PF08269 Cache domain 40 326 8.2E-74 T 14-10-2018 IPR004010 Double Cache domain 2 JV59_32170 4aae6af55bdf5f2bb95b63a180d20c15 457 SUPERFAMILY SSF118215 29 441 1.57E-89 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 JV59_32170 4aae6af55bdf5f2bb95b63a180d20c15 457 Pfam PF00375 Sodium:dicarboxylate symporter family 32 441 2.4E-97 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 JV59_32170 4aae6af55bdf5f2bb95b63a180d20c15 457 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 4.5E-30 T 14-10-2018 JV59_32170 4aae6af55bdf5f2bb95b63a180d20c15 457 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 4.5E-30 T 14-10-2018 JV59_32170 4aae6af55bdf5f2bb95b63a180d20c15 457 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 4.5E-30 T 14-10-2018 JV59_32170 4aae6af55bdf5f2bb95b63a180d20c15 457 PRINTS PR00173 Glutamate-aspartate symporter signature 259 278 4.5E-30 T 14-10-2018 JV59_32170 4aae6af55bdf5f2bb95b63a180d20c15 457 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 4.5E-30 T 14-10-2018 JV59_32170 4aae6af55bdf5f2bb95b63a180d20c15 457 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 4.5E-30 T 14-10-2018 JV59_32170 4aae6af55bdf5f2bb95b63a180d20c15 457 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 4.5E-30 T 14-10-2018 JV59_32170 4aae6af55bdf5f2bb95b63a180d20c15 457 Gene3D G3DSA:1.10.3860.10 21 456 8.2E-98 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 JV59_21050 d1e4f667ec4d892a1bb4045b98b5169e 403 Pfam PF07690 Major Facilitator Superfamily 15 296 1.5E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_21050 d1e4f667ec4d892a1bb4045b98b5169e 403 SUPERFAMILY SSF103473 13 386 2.75E-32 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_21050 d1e4f667ec4d892a1bb4045b98b5169e 403 Gene3D G3DSA:1.20.1250.20 6 391 8.9E-23 T 14-10-2018 JV59_33030 c26e5d54c1085e02ae77c66ae5e3c075 455 SUPERFAMILY SSF56322 16 454 1.96E-144 T 14-10-2018 IPR005801 ADC synthase GO:0009058 JV59_33030 c26e5d54c1085e02ae77c66ae5e3c075 455 Gene3D G3DSA:3.60.120.10 7 455 6.9E-171 T 14-10-2018 IPR005801 ADC synthase GO:0009058 JV59_33030 c26e5d54c1085e02ae77c66ae5e3c075 455 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 156 1.7E-29 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 JV59_33030 c26e5d54c1085e02ae77c66ae5e3c075 455 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 110 446 1.0E-120 T 14-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 JV59_33030 c26e5d54c1085e02ae77c66ae5e3c075 455 Pfam PF00425 chorismate binding enzyme 192 445 4.1E-97 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal JV59_33030 c26e5d54c1085e02ae77c66ae5e3c075 455 PRINTS PR00095 Anthranilate synthase component I signature 293 306 1.7E-17 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 JV59_33030 c26e5d54c1085e02ae77c66ae5e3c075 455 PRINTS PR00095 Anthranilate synthase component I signature 307 320 1.7E-17 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 JV59_33030 c26e5d54c1085e02ae77c66ae5e3c075 455 PRINTS PR00095 Anthranilate synthase component I signature 402 416 1.7E-17 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 JV59_33030 c26e5d54c1085e02ae77c66ae5e3c075 455 PRINTS PR00095 Anthranilate synthase component I signature 387 401 1.7E-17 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 JV59_22480 b57d82a7a66c52f078e54a21d40f723b 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 2 27 7.2E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_22480 b57d82a7a66c52f078e54a21d40f723b 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 389 416 7.2E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_22480 b57d82a7a66c52f078e54a21d40f723b 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 418 447 7.2E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_22480 b57d82a7a66c52f078e54a21d40f723b 553 SMART SM01049 44 130 3.3E-18 T 14-10-2018 IPR033480 Single Cache domain 2 JV59_22480 b57d82a7a66c52f078e54a21d40f723b 553 Pfam PF17200 Single Cache domain 2 48 188 2.9E-30 T 14-10-2018 IPR033480 Single Cache domain 2 JV59_22480 b57d82a7a66c52f078e54a21d40f723b 553 SUPERFAMILY SSF58104 244 553 1.83E-75 T 14-10-2018 JV59_22480 b57d82a7a66c52f078e54a21d40f723b 553 SMART SM00304 222 276 1.1E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_22480 b57d82a7a66c52f078e54a21d40f723b 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 516 3.0E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_22480 b57d82a7a66c52f078e54a21d40f723b 553 SMART SM00283 291 552 2.6E-74 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_22480 b57d82a7a66c52f078e54a21d40f723b 553 Gene3D G3DSA:3.30.450.20 30 201 1.2E-32 T 14-10-2018 JV59_22480 b57d82a7a66c52f078e54a21d40f723b 553 Gene3D G3DSA:1.10.287.950 221 553 2.1E-71 T 14-10-2018 JV59_36970 74619fa78e220c582c29836b98f2530d 209 Gene3D G3DSA:1.10.10.880 2 67 2.4E-24 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 JV59_36970 74619fa78e220c582c29836b98f2530d 209 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 96 6.0E-34 T 14-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 JV59_36970 74619fa78e220c582c29836b98f2530d 209 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 138 192 6.8E-22 T 14-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal JV59_36970 74619fa78e220c582c29836b98f2530d 209 SUPERFAMILY SSF89069 4 67 1.83E-20 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 JV59_36970 74619fa78e220c582c29836b98f2530d 209 PIRSF PIRSF016938 1 198 5.1E-33 T 14-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 JV59_23610 a34bd3286012a0d3d60aa1694e6bff89 499 Gene3D G3DSA:1.10.287.130 289 339 4.3E-37 T 14-10-2018 JV59_23610 a34bd3286012a0d3d60aa1694e6bff89 499 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 391 498 2.2E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_23610 a34bd3286012a0d3d60aa1694e6bff89 499 SUPERFAMILY SSF55874 331 497 1.2E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_23610 a34bd3286012a0d3d60aa1694e6bff89 499 SMART SM00387 387 499 3.7E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_23610 a34bd3286012a0d3d60aa1694e6bff89 499 Gene3D G3DSA:3.30.565.10 340 495 4.3E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_23610 a34bd3286012a0d3d60aa1694e6bff89 499 SUPERFAMILY SSF47384 268 342 6.08E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_23610 a34bd3286012a0d3d60aa1694e6bff89 499 SMART SM00388 283 342 0.0062 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_23610 a34bd3286012a0d3d60aa1694e6bff89 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 438 8.4E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_23610 a34bd3286012a0d3d60aa1694e6bff89 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 475 8.4E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_23380 483873631467fc17eebd5cb24e3ea743 328 SMART SM00829 8 325 1.6E-16 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JV59_23380 483873631467fc17eebd5cb24e3ea743 328 Gene3D G3DSA:3.90.180.10 11 324 2.3E-71 T 14-10-2018 JV59_23380 483873631467fc17eebd5cb24e3ea743 328 SUPERFAMILY SSF50129 1 143 1.17E-29 T 14-10-2018 IPR011032 GroES-like superfamily JV59_23380 483873631467fc17eebd5cb24e3ea743 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 92 1.2E-6 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JV59_23380 483873631467fc17eebd5cb24e3ea743 328 Pfam PF00107 Zinc-binding dehydrogenase 154 243 1.0E-23 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JV59_23380 483873631467fc17eebd5cb24e3ea743 328 Gene3D G3DSA:3.40.50.720 126 272 2.3E-71 T 14-10-2018 JV59_23380 483873631467fc17eebd5cb24e3ea743 328 SUPERFAMILY SSF51735 119 265 3.71E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_34410 60460c24a783755827ba6cf074b34806 1023 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1023 13.131 T 14-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_34410 60460c24a783755827ba6cf074b34806 1023 SMART SM00481 4 73 2.7E-6 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal JV59_34410 60460c24a783755827ba6cf074b34806 1023 Pfam PF02811 PHP domain 8 108 1.3E-11 T 14-10-2018 IPR004013 PHP domain GO:0003824 JV59_34410 60460c24a783755827ba6cf074b34806 1023 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 968 1.5E-158 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_34410 60460c24a783755827ba6cf074b34806 1023 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 269 694 4.9E-146 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_34410 60460c24a783755827ba6cf074b34806 1023 Gene3D G3DSA:3.20.20.140 1 247 1.6E-43 T 14-10-2018 JV59_34410 60460c24a783755827ba6cf074b34806 1023 Pfam PF14579 Helix-hairpin-helix motif 769 855 1.7E-13 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_34410 60460c24a783755827ba6cf074b34806 1023 Pfam PF01336 OB-fold nucleic acid binding domain 933 994 1.7E-7 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 JV59_28895 04f40f4a622d11ca905e351463feae8f 373 Gene3D G3DSA:3.40.50.620 1 219 2.7E-94 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_28895 04f40f4a622d11ca905e351463feae8f 373 Gene3D G3DSA:2.30.30.280 220 289 1.1E-26 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 JV59_28895 04f40f4a622d11ca905e351463feae8f 373 Pfam PF03054 tRNA methyl transferase 11 369 1.6E-141 T 14-10-2018 JV59_28895 04f40f4a622d11ca905e351463feae8f 373 SUPERFAMILY SSF52402 9 251 1.59E-56 T 14-10-2018 JV59_28895 04f40f4a622d11ca905e351463feae8f 373 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 11 370 39.741 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 JV59_28895 04f40f4a622d11ca905e351463feae8f 373 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 11 369 8.3E-151 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 JV59_28895 04f40f4a622d11ca905e351463feae8f 373 Gene3D G3DSA:2.40.30.10 291 373 4.7E-33 T 14-10-2018 JV59_27245 dc61a1110bd2de6caa1a4ab1feb5db5f 318 TIGRFAM TIGR00109 hemH: ferrochelatase 3 316 2.2E-103 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 JV59_27245 dc61a1110bd2de6caa1a4ab1feb5db5f 318 Gene3D G3DSA:3.40.50.1400 163 301 5.6E-90 T 14-10-2018 JV59_27245 dc61a1110bd2de6caa1a4ab1feb5db5f 318 Gene3D G3DSA:3.40.50.1400 8 316 5.6E-90 T 14-10-2018 JV59_27245 dc61a1110bd2de6caa1a4ab1feb5db5f 318 Hamap MF_00323 Ferrochelatase [hemH]. 5 318 36.385 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 JV59_27245 dc61a1110bd2de6caa1a4ab1feb5db5f 318 SUPERFAMILY SSF53800 4 316 1.44E-100 T 14-10-2018 JV59_27245 dc61a1110bd2de6caa1a4ab1feb5db5f 318 Pfam PF00762 Ferrochelatase 6 316 8.4E-107 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 JV59_27245 dc61a1110bd2de6caa1a4ab1feb5db5f 318 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 14-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 JV59_18925 eb99aeda41194302fc79e937dcd3319a 151 Pfam PF02142 MGS-like domain 26 118 8.4E-19 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain JV59_18925 eb99aeda41194302fc79e937dcd3319a 151 SUPERFAMILY SSF52335 3 150 1.7E-58 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily JV59_18925 eb99aeda41194302fc79e937dcd3319a 151 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 33.228 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 JV59_18925 eb99aeda41194302fc79e937dcd3319a 151 PIRSF PIRSF006614 8 151 2.6E-64 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 JV59_18925 eb99aeda41194302fc79e937dcd3319a 151 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 14-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 JV59_18925 eb99aeda41194302fc79e937dcd3319a 151 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 150 4.7E-66 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 JV59_18925 eb99aeda41194302fc79e937dcd3319a 151 Gene3D G3DSA:3.40.50.1380 1 151 4.4E-67 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily JV59_18925 eb99aeda41194302fc79e937dcd3319a 151 SMART SM00851 25 118 1.9E-23 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain JV59_27395 3b3eb4d78958d9ee98a1061c809ac968 363 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 363 39.719 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JV59_27395 3b3eb4d78958d9ee98a1061c809ac968 363 PRINTS PR01010 Flagellar P-ring protein signature 37 52 7.9E-85 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JV59_27395 3b3eb4d78958d9ee98a1061c809ac968 363 PRINTS PR01010 Flagellar P-ring protein signature 160 178 7.9E-85 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JV59_27395 3b3eb4d78958d9ee98a1061c809ac968 363 PRINTS PR01010 Flagellar P-ring protein signature 186 204 7.9E-85 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JV59_27395 3b3eb4d78958d9ee98a1061c809ac968 363 PRINTS PR01010 Flagellar P-ring protein signature 119 137 7.9E-85 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JV59_27395 3b3eb4d78958d9ee98a1061c809ac968 363 PRINTS PR01010 Flagellar P-ring protein signature 22 37 7.9E-85 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JV59_27395 3b3eb4d78958d9ee98a1061c809ac968 363 PRINTS PR01010 Flagellar P-ring protein signature 102 119 7.9E-85 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JV59_27395 3b3eb4d78958d9ee98a1061c809ac968 363 PRINTS PR01010 Flagellar P-ring protein signature 54 69 7.9E-85 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JV59_27395 3b3eb4d78958d9ee98a1061c809ac968 363 PRINTS PR01010 Flagellar P-ring protein signature 80 99 7.9E-85 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JV59_27395 3b3eb4d78958d9ee98a1061c809ac968 363 PRINTS PR01010 Flagellar P-ring protein signature 250 262 7.9E-85 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JV59_27395 3b3eb4d78958d9ee98a1061c809ac968 363 Pfam PF02119 Flagellar P-ring protein 22 362 2.8E-135 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JV59_39905 2908fb26e657989d5113af4b368144c9 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 5.0E-32 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 JV59_39905 2908fb26e657989d5113af4b368144c9 419 SUPERFAMILY SSF68912 1 46 4.32E-12 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily JV59_39905 2908fb26e657989d5113af4b368144c9 419 SUPERFAMILY SSF52540 90 371 1.52E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_39905 2908fb26e657989d5113af4b368144c9 419 SUPERFAMILY SSF50249 48 125 6.28E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_39905 2908fb26e657989d5113af4b368144c9 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 6.1E-220 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 JV59_39905 2908fb26e657989d5113af4b368144c9 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 252.347 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 JV59_39905 2908fb26e657989d5113af4b368144c9 419 SMART SM00959 5 47 4.6E-18 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 JV59_39905 2908fb26e657989d5113af4b368144c9 419 SMART SM00382 170 355 1.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_39905 2908fb26e657989d5113af4b368144c9 419 Gene3D G3DSA:1.10.720.10 1 47 3.0E-23 T 14-10-2018 JV59_39905 2908fb26e657989d5113af4b368144c9 419 Gene3D G3DSA:3.40.50.300 130 417 3.0E-134 T 14-10-2018 JV59_39905 2908fb26e657989d5113af4b368144c9 419 Gene3D G3DSA:2.40.50.140 48 117 1.1E-34 T 14-10-2018 JV59_39905 2908fb26e657989d5113af4b368144c9 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 2.7E-22 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_39905 2908fb26e657989d5113af4b368144c9 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 4.2E-17 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 JV59_39905 2908fb26e657989d5113af4b368144c9 419 SMART SM00357 52 118 1.7E-17 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 JV59_20245 0ad8ccfc7d7203c40f515dfb4cfdb278 500 Gene3D G3DSA:3.40.50.720 4 179 8.9E-60 T 14-10-2018 JV59_20245 0ad8ccfc7d7203c40f515dfb4cfdb278 500 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 193 486 3.0E-114 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JV59_20245 0ad8ccfc7d7203c40f515dfb4cfdb278 500 Gene3D G3DSA:3.30.360.10 180 488 5.1E-124 T 14-10-2018 JV59_20245 0ad8ccfc7d7203c40f515dfb4cfdb278 500 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 6 487 84.734 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JV59_20245 0ad8ccfc7d7203c40f515dfb4cfdb278 500 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 6 486 7.5E-202 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JV59_20245 0ad8ccfc7d7203c40f515dfb4cfdb278 500 SUPERFAMILY SSF51735 4 194 8.92E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_20245 0ad8ccfc7d7203c40f515dfb4cfdb278 500 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 191 3.1E-64 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JV59_20245 0ad8ccfc7d7203c40f515dfb4cfdb278 500 SUPERFAMILY SSF55347 181 489 3.6E-113 T 14-10-2018 JV59_20245 0ad8ccfc7d7203c40f515dfb4cfdb278 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 171 199 1.6E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JV59_20245 0ad8ccfc7d7203c40f515dfb4cfdb278 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 332 358 1.6E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JV59_20245 0ad8ccfc7d7203c40f515dfb4cfdb278 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 223 240 1.6E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JV59_20245 0ad8ccfc7d7203c40f515dfb4cfdb278 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 147 160 1.6E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JV59_20245 0ad8ccfc7d7203c40f515dfb4cfdb278 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 241 257 1.6E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JV59_20245 0ad8ccfc7d7203c40f515dfb4cfdb278 500 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 181 187 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JV59_20245 0ad8ccfc7d7203c40f515dfb4cfdb278 500 PIRSF PIRSF000110 3 489 4.7E-179 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JV59_19885 dc6f1a46ed1451f850f438fa5939e7ab 204 SUPERFAMILY SSF52172 1 128 1.71E-19 T 14-10-2018 IPR011006 CheY-like superfamily JV59_19885 dc6f1a46ed1451f850f438fa5939e7ab 204 Pfam PF00072 Response regulator receiver domain 6 115 3.7E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_19885 dc6f1a46ed1451f850f438fa5939e7ab 204 Gene3D G3DSA:3.40.50.2300 3 128 1.0E-19 T 14-10-2018 JV59_19885 dc6f1a46ed1451f850f438fa5939e7ab 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 169 3.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_19885 dc6f1a46ed1451f850f438fa5939e7ab 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 153 3.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_19885 dc6f1a46ed1451f850f438fa5939e7ab 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 181 3.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_19885 dc6f1a46ed1451f850f438fa5939e7ab 204 ProSitePatterns PS00622 LuxR-type HTH domain signature. 153 180 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_19885 dc6f1a46ed1451f850f438fa5939e7ab 204 SUPERFAMILY SSF46894 133 192 8.5E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_19885 dc6f1a46ed1451f850f438fa5939e7ab 204 SMART SM00421 136 193 1.3E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_19885 dc6f1a46ed1451f850f438fa5939e7ab 204 Gene3D G3DSA:1.10.10.10 129 197 4.8E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_19885 dc6f1a46ed1451f850f438fa5939e7ab 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 139 192 3.2E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_19885 dc6f1a46ed1451f850f438fa5939e7ab 204 SMART SM00448 4 117 1.1E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_22815 8ec96917b5ca60491be61c8038c38094 242 SUPERFAMILY SSF53850 24 240 8.58E-40 T 14-10-2018 JV59_22815 8ec96917b5ca60491be61c8038c38094 242 Gene3D G3DSA:3.40.190.10 103 201 4.1E-37 T 14-10-2018 JV59_22815 8ec96917b5ca60491be61c8038c38094 242 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 240 3.6E-31 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_22815 8ec96917b5ca60491be61c8038c38094 242 Gene3D G3DSA:3.40.190.10 28 239 4.1E-37 T 14-10-2018 JV59_22815 8ec96917b5ca60491be61c8038c38094 242 SMART SM00062 19 242 2.8E-5 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_01305 2622a5b145390cc4335ae9158e9439f3 271 Pfam PF00561 alpha/beta hydrolase fold 20 123 5.6E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_01305 2622a5b145390cc4335ae9158e9439f3 271 SUPERFAMILY SSF53474 4 268 1.93E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_01305 2622a5b145390cc4335ae9158e9439f3 271 PRINTS PR00412 Epoxide hydrolase signature 45 60 2.5E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JV59_01305 2622a5b145390cc4335ae9158e9439f3 271 PRINTS PR00412 Epoxide hydrolase signature 104 117 2.5E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JV59_01305 2622a5b145390cc4335ae9158e9439f3 271 PRINTS PR00412 Epoxide hydrolase signature 243 265 2.5E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JV59_01305 2622a5b145390cc4335ae9158e9439f3 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 5.8E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_01305 2622a5b145390cc4335ae9158e9439f3 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 5.8E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_01305 2622a5b145390cc4335ae9158e9439f3 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 5.8E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_01305 2622a5b145390cc4335ae9158e9439f3 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 5.8E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_01305 2622a5b145390cc4335ae9158e9439f3 271 Gene3D G3DSA:3.40.50.1820 1 270 1.7E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_18735 7e39ab7faf33e39c64cd11822027396f 299 Gene3D G3DSA:3.40.190.10 93 292 4.0E-40 T 14-10-2018 JV59_18735 7e39ab7faf33e39c64cd11822027396f 299 Pfam PF03466 LysR substrate binding domain 90 295 8.9E-29 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_18735 7e39ab7faf33e39c64cd11822027396f 299 Gene3D G3DSA:3.40.190.10 164 266 4.0E-40 T 14-10-2018 JV59_18735 7e39ab7faf33e39c64cd11822027396f 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 8.1E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_18735 7e39ab7faf33e39c64cd11822027396f 299 Gene3D G3DSA:1.10.10.10 3 91 5.4E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_18735 7e39ab7faf33e39c64cd11822027396f 299 SUPERFAMILY SSF46785 4 111 6.7E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_18735 7e39ab7faf33e39c64cd11822027396f 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_18735 7e39ab7faf33e39c64cd11822027396f 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_18735 7e39ab7faf33e39c64cd11822027396f 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_18735 7e39ab7faf33e39c64cd11822027396f 299 SUPERFAMILY SSF53850 90 297 3.08E-30 T 14-10-2018 JV59_16440 e1730f8e253057a4410fd09bde9d08e5 529 Pfam PF12792 CSS motif domain associated with EAL 45 237 8.1E-17 T 14-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain JV59_16440 e1730f8e253057a4410fd09bde9d08e5 529 Pfam PF00563 EAL domain 270 504 9.5E-63 T 14-10-2018 IPR001633 EAL domain JV59_16440 e1730f8e253057a4410fd09bde9d08e5 529 SUPERFAMILY SSF141868 270 515 9.02E-70 T 14-10-2018 IPR035919 EAL domain superfamily JV59_16440 e1730f8e253057a4410fd09bde9d08e5 529 Gene3D G3DSA:3.20.20.450 262 516 1.2E-73 T 14-10-2018 IPR035919 EAL domain superfamily JV59_16440 e1730f8e253057a4410fd09bde9d08e5 529 SMART SM00052 262 509 4.0E-77 T 14-10-2018 IPR001633 EAL domain JV59_34030 d29669a7ecdcf0e7fce6b338db419706 631 Pfam PF00672 HAMP domain 303 350 3.3E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_34030 d29669a7ecdcf0e7fce6b338db419706 631 Gene3D G3DSA:3.30.450.20 64 170 3.6E-31 T 14-10-2018 JV59_34030 d29669a7ecdcf0e7fce6b338db419706 631 SUPERFAMILY SSF58104 321 630 6.15E-74 T 14-10-2018 JV59_34030 d29669a7ecdcf0e7fce6b338db419706 631 SMART SM00283 368 629 5.8E-65 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_34030 d29669a7ecdcf0e7fce6b338db419706 631 Gene3D G3DSA:3.30.450.20 56 273 3.6E-31 T 14-10-2018 JV59_34030 d29669a7ecdcf0e7fce6b338db419706 631 SUPERFAMILY SSF103190 57 181 3.92E-10 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JV59_34030 d29669a7ecdcf0e7fce6b338db419706 631 Pfam PF02743 Cache domain 35 232 3.0E-22 T 14-10-2018 IPR033479 Double Cache domain 1 JV59_34030 d29669a7ecdcf0e7fce6b338db419706 631 SMART SM00304 299 353 3.8E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_34030 d29669a7ecdcf0e7fce6b338db419706 631 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 431 595 5.8E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_34030 d29669a7ecdcf0e7fce6b338db419706 631 Gene3D G3DSA:1.10.287.950 301 631 9.0E-71 T 14-10-2018 JV59_24620 9c9d74c8cc012d79bec3dce06d66dd5d 165 SUPERFAMILY SSF55729 1 150 3.6E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_24620 9c9d74c8cc012d79bec3dce06d66dd5d 165 Pfam PF13302 Acetyltransferase (GNAT) domain 64 142 5.2E-9 T 14-10-2018 IPR000182 GNAT domain JV59_24620 9c9d74c8cc012d79bec3dce06d66dd5d 165 Gene3D G3DSA:3.40.630.30 30 142 3.1E-17 T 14-10-2018 JV59_16890 d392f03b0423b8b2d2a3c4cc262f98c1 253 SUPERFAMILY SSF56214 139 250 1.57E-11 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 JV59_16890 d392f03b0423b8b2d2a3c4cc262f98c1 253 PRINTS PR01399 Enterobactin synthetase component D signature 70 90 5.8E-8 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 JV59_16890 d392f03b0423b8b2d2a3c4cc262f98c1 253 PRINTS PR01399 Enterobactin synthetase component D signature 182 198 5.8E-8 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 JV59_16890 d392f03b0423b8b2d2a3c4cc262f98c1 253 Gene3D G3DSA:3.90.470.20 65 160 1.8E-6 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 JV59_16890 d392f03b0423b8b2d2a3c4cc262f98c1 253 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 140 249 9.7E-9 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 JV59_21355 cb22b4f47ea0341c886a7ab9899454a4 427 Gene3D G3DSA:3.40.50.2300 6 147 7.9E-16 T 14-10-2018 JV59_21355 cb22b4f47ea0341c886a7ab9899454a4 427 Pfam PF13487 HD domain 274 310 1.2E-10 T 14-10-2018 JV59_21355 cb22b4f47ea0341c886a7ab9899454a4 427 SUPERFAMILY SSF109604 189 331 1.57E-9 T 14-10-2018 JV59_21355 cb22b4f47ea0341c886a7ab9899454a4 427 Gene3D G3DSA:1.10.3210.10 174 368 9.6E-22 T 14-10-2018 JV59_21355 cb22b4f47ea0341c886a7ab9899454a4 427 Pfam PF00072 Response regulator receiver domain 10 117 4.4E-9 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_21355 cb22b4f47ea0341c886a7ab9899454a4 427 SMART SM00448 7 118 0.0011 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_21355 cb22b4f47ea0341c886a7ab9899454a4 427 SUPERFAMILY SSF52172 8 150 8.82E-17 T 14-10-2018 IPR011006 CheY-like superfamily JV59_33075 c4d76235ef3b69319f78d66e71b9e434 537 Gene3D G3DSA:1.10.287.950 203 534 1.7E-63 T 14-10-2018 JV59_33075 c4d76235ef3b69319f78d66e71b9e434 537 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 498 2.6E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_33075 c4d76235ef3b69319f78d66e71b9e434 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 396 2.0E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_33075 c4d76235ef3b69319f78d66e71b9e434 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 2.0E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_33075 c4d76235ef3b69319f78d66e71b9e434 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 292 321 2.0E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_33075 c4d76235ef3b69319f78d66e71b9e434 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 2.0E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_33075 c4d76235ef3b69319f78d66e71b9e434 537 SMART SM00283 271 532 1.0E-49 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_33075 c4d76235ef3b69319f78d66e71b9e434 537 SUPERFAMILY SSF58104 224 533 2.35E-61 T 14-10-2018 JV59_33075 c4d76235ef3b69319f78d66e71b9e434 537 Pfam PF00672 HAMP domain 205 252 9.4E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_33075 c4d76235ef3b69319f78d66e71b9e434 537 SMART SM00304 203 256 2.3E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_33830 ce64884923f0b5d6a091ca0f12939dca 745 Pfam PF00753 Metallo-beta-lactamase superfamily 497 677 3.1E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase JV59_33830 ce64884923f0b5d6a091ca0f12939dca 745 SMART SM00849 499 682 1.2E-6 T 14-10-2018 IPR001279 Metallo-beta-lactamase JV59_33830 ce64884923f0b5d6a091ca0f12939dca 745 Pfam PF13567 Domain of unknown function (DUF4131) 5 170 2.9E-8 T 14-10-2018 IPR025405 Domain of unknown function DUF4131 JV59_33830 ce64884923f0b5d6a091ca0f12939dca 745 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 128 709 4.2E-111 T 14-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 JV59_33830 ce64884923f0b5d6a091ca0f12939dca 745 SUPERFAMILY SSF56281 489 724 1.25E-37 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JV59_33830 ce64884923f0b5d6a091ca0f12939dca 745 Gene3D G3DSA:3.60.15.10 490 727 4.3E-45 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JV59_33830 ce64884923f0b5d6a091ca0f12939dca 745 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 230 402 4.2E-28 T 14-10-2018 IPR004477 ComEC/Rec2-related protein JV59_33830 ce64884923f0b5d6a091ca0f12939dca 745 Pfam PF03772 Competence protein 208 461 2.7E-50 T 14-10-2018 IPR004477 ComEC/Rec2-related protein JV59_22250 73a5c4bcd391d9574d8caf76e3fe89af 292 SUPERFAMILY SSF55620 3 154 9.45E-30 T 14-10-2018 JV59_22250 73a5c4bcd391d9574d8caf76e3fe89af 292 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 150 282 7.0E-8 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 JV59_22250 73a5c4bcd391d9574d8caf76e3fe89af 292 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 24 141 5.7E-9 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 JV59_22250 73a5c4bcd391d9574d8caf76e3fe89af 292 SUPERFAMILY SSF55620 153 291 2.33E-24 T 14-10-2018 JV59_22250 73a5c4bcd391d9574d8caf76e3fe89af 292 Gene3D G3DSA:3.30.479.10 151 291 2.5E-8 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 JV59_22250 73a5c4bcd391d9574d8caf76e3fe89af 292 Gene3D G3DSA:3.30.479.10 12 150 5.0E-26 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 JV59_21550 10f5d802b7d812280975044aecb54516 431 Gene3D G3DSA:3.30.565.10 296 388 2.9E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_21550 10f5d802b7d812280975044aecb54516 431 SMART SM00388 228 295 2.3E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_21550 10f5d802b7d812280975044aecb54516 431 Pfam PF00512 His Kinase A (phospho-acceptor) domain 232 293 5.2E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_21550 10f5d802b7d812280975044aecb54516 431 SUPERFAMILY SSF55874 297 412 2.41E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_21550 10f5d802b7d812280975044aecb54516 431 Gene3D G3DSA:1.10.287.130 180 295 4.9E-12 T 14-10-2018 JV59_21550 10f5d802b7d812280975044aecb54516 431 SUPERFAMILY SSF47384 211 292 7.65E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_26775 00240ae06b6853200909d00d8daeb161 102 PIRSF PIRSF003113 1 99 4.9E-38 T 14-10-2018 IPR002634 BolA protein JV59_26775 00240ae06b6853200909d00d8daeb161 102 SUPERFAMILY SSF82657 1 88 1.29E-32 T 14-10-2018 IPR036065 BolA-like superfamily JV59_26775 00240ae06b6853200909d00d8daeb161 102 Gene3D G3DSA:3.30.300.90 1 89 2.9E-36 T 14-10-2018 JV59_26775 00240ae06b6853200909d00d8daeb161 102 Pfam PF01722 BolA-like protein 10 83 2.1E-31 T 14-10-2018 IPR002634 BolA protein JV59_28535 32ecc14e2c86a95314699154624a38cf 394 SUPERFAMILY SSF48695 12 187 8.73E-60 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily JV59_28535 32ecc14e2c86a95314699154624a38cf 394 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 187 9.8E-72 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal JV59_28535 32ecc14e2c86a95314699154624a38cf 394 PIRSF PIRSF000014 1 394 5.8E-161 T 14-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 JV59_28535 32ecc14e2c86a95314699154624a38cf 394 Gene3D G3DSA:1.10.3820.10 15 192 2.3E-38 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily JV59_28535 32ecc14e2c86a95314699154624a38cf 394 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 394 1.7E-187 T 14-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 JV59_15995 6e1fc8bdcd0f5e5a6558e47414d821f9 359 Gene3D G3DSA:3.40.190.10 139 343 1.1E-117 T 14-10-2018 JV59_15995 6e1fc8bdcd0f5e5a6558e47414d821f9 359 Pfam PF13416 Bacterial extracellular solute-binding protein 48 319 8.0E-36 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein JV59_15995 6e1fc8bdcd0f5e5a6558e47414d821f9 359 SUPERFAMILY SSF53850 28 357 1.37E-58 T 14-10-2018 JV59_15995 6e1fc8bdcd0f5e5a6558e47414d821f9 359 Gene3D G3DSA:3.40.190.10 32 337 1.1E-117 T 14-10-2018 JV59_02775 77256076640ca6839162a4a90afc7776 857 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 856 23.408 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JV59_02775 77256076640ca6839162a4a90afc7776 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 570 3.5E-9 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_02775 77256076640ca6839162a4a90afc7776 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 617 649 2.0E-7 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_02775 77256076640ca6839162a4a90afc7776 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 170 2.4E-25 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_02775 77256076640ca6839162a4a90afc7776 857 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 1.2E-79 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 JV59_02775 77256076640ca6839162a4a90afc7776 857 SUPERFAMILY SSF50677 226 414 3.77E-56 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 JV59_02775 77256076640ca6839162a4a90afc7776 857 Pfam PF08264 Anticodon-binding domain of tRNA 699 816 3.5E-16 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 JV59_02775 77256076640ca6839162a4a90afc7776 857 SUPERFAMILY SSF52374 4 666 2.93E-143 T 14-10-2018 JV59_02775 77256076640ca6839162a4a90afc7776 857 Gene3D G3DSA:3.10.20.590 796 856 5.8E-25 T 14-10-2018 JV59_02775 77256076640ca6839162a4a90afc7776 857 Gene3D G3DSA:1.10.730.10 8 788 0.0 T 14-10-2018 JV59_02775 77256076640ca6839162a4a90afc7776 857 Gene3D G3DSA:3.10.330.110 565 626 0.0 T 14-10-2018 JV59_02775 77256076640ca6839162a4a90afc7776 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 555 565 6.1E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JV59_02775 77256076640ca6839162a4a90afc7776 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 6.1E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JV59_02775 77256076640ca6839162a4a90afc7776 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 484 502 6.1E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JV59_02775 77256076640ca6839162a4a90afc7776 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 522 544 6.1E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JV59_02775 77256076640ca6839162a4a90afc7776 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 6.1E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JV59_02775 77256076640ca6839162a4a90afc7776 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 6.1E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JV59_02775 77256076640ca6839162a4a90afc7776 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 6.1E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JV59_02775 77256076640ca6839162a4a90afc7776 857 Gene3D G3DSA:3.90.740.10 227 413 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 JV59_02775 77256076640ca6839162a4a90afc7776 857 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 856 0.0 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JV59_02775 77256076640ca6839162a4a90afc7776 857 SUPERFAMILY SSF47323 660 856 2.43E-34 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_02775 77256076640ca6839162a4a90afc7776 857 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_02775 77256076640ca6839162a4a90afc7776 857 Gene3D G3DSA:3.40.50.620 33 564 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_37295 7444dc077519c5ebe52d73afe30fda67 502 SUPERFAMILY SSF53187 180 496 1.91E-123 T 14-10-2018 JV59_37295 7444dc077519c5ebe52d73afe30fda67 502 Gene3D G3DSA:3.40.630.10 181 497 3.4E-139 T 14-10-2018 JV59_37295 7444dc077519c5ebe52d73afe30fda67 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 1.7E-54 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 JV59_37295 7444dc077519c5ebe52d73afe30fda67 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 1.7E-54 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 JV59_37295 7444dc077519c5ebe52d73afe30fda67 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 1.7E-54 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 JV59_37295 7444dc077519c5ebe52d73afe30fda67 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 1.7E-54 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 JV59_37295 7444dc077519c5ebe52d73afe30fda67 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 1.7E-54 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 JV59_37295 7444dc077519c5ebe52d73afe30fda67 502 SUPERFAMILY SSF52949 1 184 1.0E-51 T 14-10-2018 JV59_37295 7444dc077519c5ebe52d73afe30fda67 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 489 1.8E-122 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 JV59_37295 7444dc077519c5ebe52d73afe30fda67 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 4.2E-34 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 JV59_37295 7444dc077519c5ebe52d73afe30fda67 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.645 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 JV59_37295 7444dc077519c5ebe52d73afe30fda67 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 JV59_37295 7444dc077519c5ebe52d73afe30fda67 502 Gene3D G3DSA:3.40.220.10 1 159 7.3E-60 T 14-10-2018 JV59_02010 f64ed5cc0ad45b46bff876121f464d02 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 283 1.3E-100 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 JV59_02010 f64ed5cc0ad45b46bff876121f464d02 287 Gene3D G3DSA:3.30.950.10 121 240 8.0E-44 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 JV59_02010 f64ed5cc0ad45b46bff876121f464d02 287 SUPERFAMILY SSF53790 12 232 2.75E-85 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 JV59_02010 f64ed5cc0ad45b46bff876121f464d02 287 PIRSF PIRSF005917 1 286 2.2E-106 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 JV59_02010 f64ed5cc0ad45b46bff876121f464d02 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 1.5E-28 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 JV59_02010 f64ed5cc0ad45b46bff876121f464d02 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.135 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 JV59_02010 f64ed5cc0ad45b46bff876121f464d02 287 Gene3D G3DSA:3.40.1010.10 2 120 1.2E-46 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 JV59_02010 f64ed5cc0ad45b46bff876121f464d02 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 JV59_25640 1aa350009855f3ca5bf568b770ad5436 418 Gene3D G3DSA:3.40.1610.10 1 237 1.0E-45 T 14-10-2018 IPR027479 Protein of unknown function DUF917, N-terminal JV59_25640 1aa350009855f3ca5bf568b770ad5436 418 Pfam PF06032 Protein of unknown function (DUF917) 6 395 1.2E-58 T 14-10-2018 IPR010318 Protein of unknown function DUF917 JV59_25640 1aa350009855f3ca5bf568b770ad5436 418 SUPERFAMILY SSF160991 2 408 9.02E-62 T 14-10-2018 JV59_25640 1aa350009855f3ca5bf568b770ad5436 418 Gene3D G3DSA:2.40.390.10 260 404 9.5E-22 T 14-10-2018 IPR024071 Protein of unknown function DUF917, C-terminal JV59_39790 90ce240c00f797976b76e8bf54685039 127 SUPERFAMILY SSF54593 3 127 1.32E-20 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_39790 90ce240c00f797976b76e8bf54685039 127 Gene3D G3DSA:3.10.180.10 2 127 8.6E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_39790 90ce240c00f797976b76e8bf54685039 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 124 2.3E-11 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JV59_28110 417e78c1a6dd6d4ccfe4094eb16e3049 637 Gene3D G3DSA:3.30.450.20 66 175 7.7E-35 T 14-10-2018 JV59_28110 417e78c1a6dd6d4ccfe4094eb16e3049 637 Gene3D G3DSA:3.30.450.20 54 279 7.7E-35 T 14-10-2018 JV59_28110 417e78c1a6dd6d4ccfe4094eb16e3049 637 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 437 602 1.3E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_28110 417e78c1a6dd6d4ccfe4094eb16e3049 637 Gene3D G3DSA:1.10.287.950 306 637 1.8E-71 T 14-10-2018 JV59_28110 417e78c1a6dd6d4ccfe4094eb16e3049 637 SMART SM00283 374 635 5.1E-66 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_28110 417e78c1a6dd6d4ccfe4094eb16e3049 637 Pfam PF02743 Cache domain 38 267 7.5E-21 T 14-10-2018 IPR033479 Double Cache domain 1 JV59_28110 417e78c1a6dd6d4ccfe4094eb16e3049 637 SUPERFAMILY SSF103190 77 184 1.73E-9 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JV59_28110 417e78c1a6dd6d4ccfe4094eb16e3049 637 Pfam PF00672 HAMP domain 309 355 2.8E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_28110 417e78c1a6dd6d4ccfe4094eb16e3049 637 SUPERFAMILY SSF58104 327 636 7.72E-75 T 14-10-2018 JV59_28110 417e78c1a6dd6d4ccfe4094eb16e3049 637 SMART SM00304 394 461 40.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_28110 417e78c1a6dd6d4ccfe4094eb16e3049 637 SMART SM00304 305 359 3.7E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_28110 417e78c1a6dd6d4ccfe4094eb16e3049 637 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 472 499 3.8E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_28110 417e78c1a6dd6d4ccfe4094eb16e3049 637 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 284 304 3.8E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_28110 417e78c1a6dd6d4ccfe4094eb16e3049 637 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 501 530 3.8E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_24150 fa4e3943f86e2930449b096ce2b647c8 376 Gene3D G3DSA:2.40.50.100 64 122 1.9E-7 T 14-10-2018 JV59_24150 fa4e3943f86e2930449b096ce2b647c8 376 SUPERFAMILY SSF111369 63 114 2.09E-6 T 14-10-2018 JV59_24150 fa4e3943f86e2930449b096ce2b647c8 376 Gene3D G3DSA:2.40.30.170 243 355 2.9E-11 T 14-10-2018 JV59_24150 fa4e3943f86e2930449b096ce2b647c8 376 Pfam PF13533 Biotin-lipoyl like 64 111 1.4E-8 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain JV59_24150 fa4e3943f86e2930449b096ce2b647c8 376 Gene3D G3DSA:1.10.287.470 123 190 4.4E-11 T 14-10-2018 JV59_23020 975ff7116bfb61a146e53fe1e970a10c 827 Gene3D G3DSA:1.20.1480.50 284 384 5.7E-5 T 14-10-2018 JV59_23020 975ff7116bfb61a146e53fe1e970a10c 827 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 388 549 2.4E-40 T 14-10-2018 IPR000160 GGDEF domain JV59_23020 975ff7116bfb61a146e53fe1e970a10c 827 Gene3D G3DSA:3.20.20.450 564 824 3.5E-95 T 14-10-2018 IPR035919 EAL domain superfamily JV59_23020 975ff7116bfb61a146e53fe1e970a10c 827 Pfam PF00563 EAL domain 568 803 3.1E-75 T 14-10-2018 IPR001633 EAL domain JV59_23020 975ff7116bfb61a146e53fe1e970a10c 827 SUPERFAMILY SSF141868 568 815 1.96E-87 T 14-10-2018 IPR035919 EAL domain superfamily JV59_23020 975ff7116bfb61a146e53fe1e970a10c 827 Gene3D G3DSA:3.30.70.270 385 563 2.4E-56 T 14-10-2018 JV59_23020 975ff7116bfb61a146e53fe1e970a10c 827 Pfam PF00990 Diguanylate cyclase, GGDEF domain 390 546 6.0E-45 T 14-10-2018 IPR000160 GGDEF domain JV59_23020 975ff7116bfb61a146e53fe1e970a10c 827 SMART SM00304 325 377 0.0015 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_23020 975ff7116bfb61a146e53fe1e970a10c 827 SMART SM00267 377 550 2.5E-61 T 14-10-2018 IPR000160 GGDEF domain JV59_23020 975ff7116bfb61a146e53fe1e970a10c 827 SMART SM00052 560 808 1.4E-104 T 14-10-2018 IPR001633 EAL domain JV59_23020 975ff7116bfb61a146e53fe1e970a10c 827 SUPERFAMILY SSF55073 395 551 1.8E-47 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_19915 e9885f308c00e882ac69a106b0ff21d0 530 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 262 8.3E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JV59_19915 e9885f308c00e882ac69a106b0ff21d0 530 SUPERFAMILY SSF52540 5 256 2.44E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_19915 e9885f308c00e882ac69a106b0ff21d0 530 Pfam PF00005 ABC transporter 26 184 2.9E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_19915 e9885f308c00e882ac69a106b0ff21d0 530 SMART SM00382 34 234 6.5E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_19915 e9885f308c00e882ac69a106b0ff21d0 530 SMART SM00382 311 502 3.7E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_19915 e9885f308c00e882ac69a106b0ff21d0 530 SUPERFAMILY SSF52540 275 524 3.97E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_19915 e9885f308c00e882ac69a106b0ff21d0 530 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_19915 e9885f308c00e882ac69a106b0ff21d0 530 ProSitePatterns PS00211 ABC transporters family signature. 425 439 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_19915 e9885f308c00e882ac69a106b0ff21d0 530 Gene3D G3DSA:3.40.50.300 272 529 1.0E-76 T 14-10-2018 JV59_19915 e9885f308c00e882ac69a106b0ff21d0 530 Gene3D G3DSA:3.40.50.300 3 270 6.4E-80 T 14-10-2018 JV59_19915 e9885f308c00e882ac69a106b0ff21d0 530 Pfam PF00005 ABC transporter 303 453 4.6E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_35305 094050ae3c904feb08124fd4992dc1fa 635 Pfam PF01578 Cytochrome C assembly protein 88 293 5.0E-43 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 JV59_35305 094050ae3c904feb08124fd4992dc1fa 635 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 616 1.8E-171 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_35305 094050ae3c904feb08124fd4992dc1fa 635 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 3.4E-6 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_35305 094050ae3c904feb08124fd4992dc1fa 635 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 349 366 3.4E-6 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_35305 094050ae3c904feb08124fd4992dc1fa 635 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 311 326 3.4E-6 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_35305 094050ae3c904feb08124fd4992dc1fa 635 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 392 411 3.4E-6 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_35305 094050ae3c904feb08124fd4992dc1fa 635 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 187 202 3.4E-6 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_35305 094050ae3c904feb08124fd4992dc1fa 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 79 105 6.6E-76 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_35305 094050ae3c904feb08124fd4992dc1fa 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 157 179 6.6E-76 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_35305 094050ae3c904feb08124fd4992dc1fa 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 208 234 6.6E-76 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_35305 094050ae3c904feb08124fd4992dc1fa 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 308 327 6.6E-76 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_35305 094050ae3c904feb08124fd4992dc1fa 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 242 262 6.6E-76 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_35305 094050ae3c904feb08124fd4992dc1fa 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 130 147 6.6E-76 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_35305 094050ae3c904feb08124fd4992dc1fa 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 272 292 6.6E-76 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_35305 094050ae3c904feb08124fd4992dc1fa 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 292 308 6.6E-76 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_35305 094050ae3c904feb08124fd4992dc1fa 635 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 313 617 2.9E-59 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal JV59_37050 5e8d764e2fae63c6fb6264c89acc0e6e 351 Gene3D G3DSA:3.20.20.190 21 350 3.9E-122 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 JV59_37050 5e8d764e2fae63c6fb6264c89acc0e6e 351 SUPERFAMILY SSF51695 22 349 1.05E-90 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 JV59_37050 5e8d764e2fae63c6fb6264c89acc0e6e 351 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 28 344 1.3E-64 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 JV59_01865 021a4972ed890e261691892893f95fdc 1487 Gene3D G3DSA:2.160.20.60 1200 1468 1.7E-99 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 JV59_01865 021a4972ed890e261691892893f95fdc 1487 Pfam PF04898 Glutamate synthase central domain 458 738 3.4E-102 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 JV59_01865 021a4972ed890e261691892893f95fdc 1487 Gene3D G3DSA:3.20.20.70 484 1172 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_01865 021a4972ed890e261691892893f95fdc 1487 Pfam PF01493 GXGXG motif 1236 1418 1.8E-73 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 JV59_01865 021a4972ed890e261691892893f95fdc 1487 Gene3D G3DSA:3.20.20.70 431 793 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_01865 021a4972ed890e261691892893f95fdc 1487 SUPERFAMILY SSF69336 1214 1465 1.44E-86 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 JV59_01865 021a4972ed890e261691892893f95fdc 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 9.1E-178 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain JV59_01865 021a4972ed890e261691892893f95fdc 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1156 3.2E-152 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 JV59_01865 021a4972ed890e261691892893f95fdc 1487 SUPERFAMILY SSF56235 13 429 1.08E-149 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JV59_01865 021a4972ed890e261691892893f95fdc 1487 Gene3D G3DSA:3.60.20.10 13 546 0.0 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JV59_01865 021a4972ed890e261691892893f95fdc 1487 SUPERFAMILY SSF51395 434 1191 4.12E-247 T 14-10-2018 JV59_32960 9e6a411db79d2d201775ccec7723a7f6 462 PIRSF PIRSF028099 4 462 6.2E-181 T 14-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase JV59_32960 9e6a411db79d2d201775ccec7723a7f6 462 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 23 462 7.9E-141 T 14-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase JV59_32960 9e6a411db79d2d201775ccec7723a7f6 462 Gene3D G3DSA:1.10.760.10 318 462 3.0E-9 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_32960 9e6a411db79d2d201775ccec7723a7f6 462 SUPERFAMILY SSF46626 321 462 8.08E-24 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_17065 7c93d1c0c41580b07106346e8cc1f847 436 Pfam PF03109 ABC1 family 115 230 9.1E-30 T 14-10-2018 IPR004147 UbiB domain JV59_17065 7c93d1c0c41580b07106346e8cc1f847 436 SUPERFAMILY SSF56112 106 324 5.78E-15 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily JV59_25435 713d1f631e301362535aceb23eea0326 589 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 450 1.1E-81 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 JV59_25435 713d1f631e301362535aceb23eea0326 589 Pfam PF00474 Sodium:solute symporter family 35 442 2.0E-49 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 JV59_25435 713d1f631e301362535aceb23eea0326 589 Gene3D G3DSA:1.20.1730.10 23 559 3.6E-115 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily JV59_37910 3535e2eec0a85d65f1c16e86dcecaac4 209 Gene3D G3DSA:2.40.30.10 129 209 5.6E-20 T 14-10-2018 JV59_37910 3535e2eec0a85d65f1c16e86dcecaac4 209 Gene3D G3DSA:2.40.50.620 32 96 4.3E-15 T 14-10-2018 JV59_37910 3535e2eec0a85d65f1c16e86dcecaac4 209 Pfam PF00297 Ribosomal protein L3 94 182 2.1E-16 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_37910 3535e2eec0a85d65f1c16e86dcecaac4 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site JV59_37910 3535e2eec0a85d65f1c16e86dcecaac4 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 5.4E-95 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37910 3535e2eec0a85d65f1c16e86dcecaac4 209 SUPERFAMILY SSF50447 1 208 1.06E-84 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JV59_37910 3535e2eec0a85d65f1c16e86dcecaac4 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.417 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_28640 c7c96703b7d6d6e77c277c2e83a6b223 179 Pfam PF00691 OmpA family 78 173 2.4E-21 T 14-10-2018 IPR006665 OmpA-like domain JV59_28640 c7c96703b7d6d6e77c277c2e83a6b223 179 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 76 179 5.3E-44 T 14-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 JV59_28640 c7c96703b7d6d6e77c277c2e83a6b223 179 SUPERFAMILY SSF103088 71 179 3.79E-33 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_28640 c7c96703b7d6d6e77c277c2e83a6b223 179 ProSitePatterns PS01068 OmpA-like domain. 111 155 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 JV59_28640 c7c96703b7d6d6e77c277c2e83a6b223 179 PRINTS PR01021 OMPA domain signature 109 124 1.1E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_28640 c7c96703b7d6d6e77c277c2e83a6b223 179 PRINTS PR01021 OMPA domain signature 79 101 1.1E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_28640 c7c96703b7d6d6e77c277c2e83a6b223 179 PRINTS PR01021 OMPA domain signature 124 140 1.1E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_28640 c7c96703b7d6d6e77c277c2e83a6b223 179 Gene3D G3DSA:3.30.1330.60 55 179 2.4E-40 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_28640 c7c96703b7d6d6e77c277c2e83a6b223 179 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 179 30.853 T 14-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 JV59_02440 17636f39f47a38f007841469999d4751 873 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 1.4E-35 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 JV59_02440 17636f39f47a38f007841469999d4751 873 SMART SM00471 447 594 1.0E-10 T 14-10-2018 IPR003607 HD/PDEase domain JV59_02440 17636f39f47a38f007841469999d4751 873 Gene3D G3DSA:1.10.3210.10 436 580 6.8E-9 T 14-10-2018 JV59_02440 17636f39f47a38f007841469999d4751 873 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 873 330.727 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 JV59_02440 17636f39f47a38f007841469999d4751 873 SUPERFAMILY SSF55021 796 864 1.96E-8 T 14-10-2018 JV59_02440 17636f39f47a38f007841469999d4751 873 SUPERFAMILY SSF55021 689 762 6.66E-8 T 14-10-2018 JV59_02440 17636f39f47a38f007841469999d4751 873 SUPERFAMILY SSF81593 200 310 1.49E-9 T 14-10-2018 JV59_02440 17636f39f47a38f007841469999d4751 873 Pfam PF01909 Nucleotidyltransferase domain 61 105 3.9E-7 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 JV59_02440 17636f39f47a38f007841469999d4751 873 SUPERFAMILY SSF81301 31 171 4.64E-19 T 14-10-2018 JV59_02440 17636f39f47a38f007841469999d4751 873 Pfam PF01966 HD domain 451 584 1.8E-14 T 14-10-2018 IPR006674 HD domain JV59_02440 17636f39f47a38f007841469999d4751 873 SUPERFAMILY SSF109604 418 588 5.34E-14 T 14-10-2018 JV59_02440 17636f39f47a38f007841469999d4751 873 PIRSF PIRSF006288 7 873 0.0 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 JV59_02440 17636f39f47a38f007841469999d4751 873 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 29 869 0.0 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 JV59_29065 6ddab4d3caec705ad4ce540753499cf7 484 SUPERFAMILY SSF56024 96 313 2.56E-50 T 14-10-2018 JV59_29065 6ddab4d3caec705ad4ce540753499cf7 484 SMART SM00155 397 424 4.4E-6 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 JV59_29065 6ddab4d3caec705ad4ce540753499cf7 484 SMART SM00155 219 246 4.1E-5 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 JV59_29065 6ddab4d3caec705ad4ce540753499cf7 484 Pfam PF13091 PLD-like domain 327 444 4.9E-24 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 JV59_29065 6ddab4d3caec705ad4ce540753499cf7 484 Pfam PF13091 PLD-like domain 134 268 6.0E-17 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 JV59_29065 6ddab4d3caec705ad4ce540753499cf7 484 Gene3D G3DSA:3.30.870.10 315 456 2.9E-23 T 14-10-2018 JV59_29065 6ddab4d3caec705ad4ce540753499cf7 484 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 484 49.79 T 14-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 JV59_29065 6ddab4d3caec705ad4ce540753499cf7 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 9 484 2.3E-150 T 14-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 JV59_29065 6ddab4d3caec705ad4ce540753499cf7 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 59 7.0E-6 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal JV59_29065 6ddab4d3caec705ad4ce540753499cf7 484 SUPERFAMILY SSF56024 274 469 8.07E-46 T 14-10-2018 JV59_29065 6ddab4d3caec705ad4ce540753499cf7 484 Gene3D G3DSA:3.30.870.10 117 308 2.3E-38 T 14-10-2018 JV59_27345 04249e555a8d380deafcec350195542e 248 SMART SM00858 126 188 1.2E-6 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 JV59_27345 04249e555a8d380deafcec350195542e 248 Gene3D G3DSA:2.30.30.760 188 247 5.7E-13 T 14-10-2018 JV59_27345 04249e555a8d380deafcec350195542e 248 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 114 246 1.1E-39 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal JV59_27345 04249e555a8d380deafcec350195542e 248 Pfam PF13144 Chaperone for flagella basal body P-ring formation 49 246 4.0E-52 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal JV59_40115 93f745198aca781e8c2ea389d3f14333 403 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 373 386 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JV59_40115 93f745198aca781e8c2ea389d3f14333 403 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 127 400 63.538 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 JV59_40115 93f745198aca781e8c2ea389d3f14333 403 Pfam PF02881 SRP54-type protein, helical bundle domain 119 180 1.2E-13 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JV59_40115 93f745198aca781e8c2ea389d3f14333 403 SMART SM00962 199 400 1.2E-121 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JV59_40115 93f745198aca781e8c2ea389d3f14333 403 SUPERFAMILY SSF52540 197 400 9.79E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_40115 93f745198aca781e8c2ea389d3f14333 403 SMART SM00382 198 378 1.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_40115 93f745198aca781e8c2ea389d3f14333 403 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 128 399 7.6E-114 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 JV59_40115 93f745198aca781e8c2ea389d3f14333 403 Gene3D G3DSA:3.40.50.300 196 388 1.7E-115 T 14-10-2018 JV59_40115 93f745198aca781e8c2ea389d3f14333 403 SUPERFAMILY SSF47364 99 178 4.71E-22 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 JV59_40115 93f745198aca781e8c2ea389d3f14333 403 Pfam PF00448 SRP54-type protein, GTPase domain 200 399 1.0E-76 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JV59_40115 93f745198aca781e8c2ea389d3f14333 403 SMART SM00963 104 184 7.5E-25 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JV59_40115 93f745198aca781e8c2ea389d3f14333 403 Gene3D G3DSA:1.20.120.140 101 398 1.7E-115 T 14-10-2018 JV59_00110 e24643806e7c814cb8007aaa39607a82 226 SUPERFAMILY SSF56784 1 222 7.5E-61 T 14-10-2018 IPR036412 HAD-like superfamily JV59_00110 e24643806e7c814cb8007aaa39607a82 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 3.9E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_00110 e24643806e7c814cb8007aaa39607a82 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 175 3.9E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_00110 e24643806e7c814cb8007aaa39607a82 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 3.9E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_00110 e24643806e7c814cb8007aaa39607a82 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 3.9E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_00110 e24643806e7c814cb8007aaa39607a82 226 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 7 221 5.1E-62 T 14-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 JV59_00110 e24643806e7c814cb8007aaa39607a82 226 Gene3D G3DSA:1.10.150.240 19 92 4.8E-66 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JV59_00110 e24643806e7c814cb8007aaa39607a82 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 79 192 5.1E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_00110 e24643806e7c814cb8007aaa39607a82 226 Gene3D G3DSA:3.40.50.1000 7 214 4.8E-66 T 14-10-2018 IPR023214 HAD superfamily JV59_00110 e24643806e7c814cb8007aaa39607a82 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 191 6.9E-40 T 14-10-2018 JV59_00110 e24643806e7c814cb8007aaa39607a82 226 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 80 191 3.0E-15 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 JV59_00110 e24643806e7c814cb8007aaa39607a82 226 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 4 223 36.484 T 14-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 JV59_00110 e24643806e7c814cb8007aaa39607a82 226 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 100 187 1.2E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_31720 258fce0c34e96ec0facf700dcebc0716 474 Pfam PF01189 16S rRNA methyltransferase RsmB/F 111 308 2.2E-47 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 JV59_31720 258fce0c34e96ec0facf700dcebc0716 474 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 309 1.1E-98 T 14-10-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 JV59_31720 258fce0c34e96ec0facf700dcebc0716 474 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 474 63.625 T 14-10-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 JV59_31720 258fce0c34e96ec0facf700dcebc0716 474 Gene3D G3DSA:2.30.130.90 311 474 2.6E-67 T 14-10-2018 JV59_31720 258fce0c34e96ec0facf700dcebc0716 474 Gene3D G3DSA:3.40.50.150 2 309 1.2E-96 T 14-10-2018 JV59_31720 258fce0c34e96ec0facf700dcebc0716 474 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 187 198 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 JV59_31720 258fce0c34e96ec0facf700dcebc0716 474 SUPERFAMILY SSF53335 7 309 2.55E-63 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_31720 258fce0c34e96ec0facf700dcebc0716 474 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 420 469 3.0E-10 T 14-10-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain JV59_31720 258fce0c34e96ec0facf700dcebc0716 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 292 309 1.1E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase JV59_31720 258fce0c34e96ec0facf700dcebc0716 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 121 131 1.1E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase JV59_31720 258fce0c34e96ec0facf700dcebc0716 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 188 200 1.1E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase JV59_31720 258fce0c34e96ec0facf700dcebc0716 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 89 103 1.1E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase JV59_31720 258fce0c34e96ec0facf700dcebc0716 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 238 254 1.1E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase JV59_31720 258fce0c34e96ec0facf700dcebc0716 474 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 103 1.6E-30 T 14-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 JV59_39295 4640b889a81c538f4e91c2dc9538776c 257 PIRSF PIRSF009320 58 252 6.8E-9 T 14-10-2018 JV59_39295 4640b889a81c538f4e91c2dc9538776c 257 PIRSF PIRSF009320 2 51 2.3E-13 T 14-10-2018 JV59_39295 4640b889a81c538f4e91c2dc9538776c 257 Pfam PF13614 AAA domain 2 178 3.9E-63 T 14-10-2018 IPR025669 AAA domain JV59_39295 4640b889a81c538f4e91c2dc9538776c 257 Gene3D G3DSA:3.40.50.300 1 255 6.8E-78 T 14-10-2018 JV59_39295 4640b889a81c538f4e91c2dc9538776c 257 SUPERFAMILY SSF52540 2 253 2.03E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_23305 9eb80a2a89e3c69841b10a6eefca8234 426 Pfam PF13416 Bacterial extracellular solute-binding protein 45 357 2.6E-36 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein JV59_23305 9eb80a2a89e3c69841b10a6eefca8234 426 SUPERFAMILY SSF53850 24 421 8.58E-56 T 14-10-2018 JV59_23305 9eb80a2a89e3c69841b10a6eefca8234 426 Gene3D G3DSA:3.40.190.10 24 425 1.6E-66 T 14-10-2018 JV59_21525 faa8b81078aa9936d9c7421e510a8a39 380 Gene3D G3DSA:1.10.287.470 104 175 4.4E-38 T 14-10-2018 JV59_21525 faa8b81078aa9936d9c7421e510a8a39 380 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 89 276 2.9E-12 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JV59_21525 faa8b81078aa9936d9c7421e510a8a39 380 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 364 2.8E-37 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 JV59_21525 faa8b81078aa9936d9c7421e510a8a39 380 Gene3D G3DSA:2.40.30.170 58 296 4.4E-38 T 14-10-2018 JV59_21525 faa8b81078aa9936d9c7421e510a8a39 380 SUPERFAMILY SSF111369 86 289 5.75E-13 T 14-10-2018 JV59_21525 faa8b81078aa9936d9c7421e510a8a39 380 Gene3D G3DSA:2.40.50.100 67 209 4.4E-38 T 14-10-2018 JV59_21525 faa8b81078aa9936d9c7421e510a8a39 380 Gene3D G3DSA:2.40.420.20 297 364 4.4E-38 T 14-10-2018 JV59_00115 d7528bf8f1c213ccddad76cd65af4ef5 345 Gene3D G3DSA:1.10.240.10 198 311 5.7E-138 T 14-10-2018 JV59_00115 d7528bf8f1c213ccddad76cd65af4ef5 345 SUPERFAMILY SSF52374 5 341 1.72E-89 T 14-10-2018 JV59_00115 d7528bf8f1c213ccddad76cd65af4ef5 345 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 2.6E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 JV59_00115 d7528bf8f1c213ccddad76cd65af4ef5 345 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 149 170 2.6E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 JV59_00115 d7528bf8f1c213ccddad76cd65af4ef5 345 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 205 215 2.6E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 JV59_00115 d7528bf8f1c213ccddad76cd65af4ef5 345 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 2.6E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 JV59_00115 d7528bf8f1c213ccddad76cd65af4ef5 345 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 342 40.605 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 JV59_00115 d7528bf8f1c213ccddad76cd65af4ef5 345 Pfam PF00579 tRNA synthetases class I (W and Y) 3 296 3.6E-77 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_00115 d7528bf8f1c213ccddad76cd65af4ef5 345 Gene3D G3DSA:3.40.50.620 5 340 5.7E-138 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_00115 d7528bf8f1c213ccddad76cd65af4ef5 345 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 341 6.7E-108 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 JV59_36710 8773da637a30f384c0a4e2f101d90250 748 SUPERFAMILY SSF55781 2 158 4.8E-33 T 14-10-2018 JV59_36710 8773da637a30f384c0a4e2f101d90250 748 Pfam PF01590 GAF domain 17 153 4.1E-15 T 14-10-2018 IPR003018 GAF domain GO:0005515 JV59_36710 8773da637a30f384c0a4e2f101d90250 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 665 677 6.1E-23 T 14-10-2018 JV59_36710 8773da637a30f384c0a4e2f101d90250 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 6.1E-23 T 14-10-2018 JV59_36710 8773da637a30f384c0a4e2f101d90250 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 629 644 6.1E-23 T 14-10-2018 JV59_36710 8773da637a30f384c0a4e2f101d90250 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 627 6.1E-23 T 14-10-2018 JV59_36710 8773da637a30f384c0a4e2f101d90250 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 171 729 2.3E-132 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 JV59_36710 8773da637a30f384c0a4e2f101d90250 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 172 294 1.1E-22 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 JV59_36710 8773da637a30f384c0a4e2f101d90250 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 612 630 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 JV59_36710 8773da637a30f384c0a4e2f101d90250 748 SUPERFAMILY SSF47831 198 311 3.4E-26 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 JV59_36710 8773da637a30f384c0a4e2f101d90250 748 Gene3D G3DSA:3.20.20.60 400 740 4.2E-104 T 14-10-2018 JV59_36710 8773da637a30f384c0a4e2f101d90250 748 SUPERFAMILY SSF52009 293 412 1.03E-24 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 JV59_36710 8773da637a30f384c0a4e2f101d90250 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 319 391 5.2E-15 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JV59_36710 8773da637a30f384c0a4e2f101d90250 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 426 706 1.8E-95 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 JV59_36710 8773da637a30f384c0a4e2f101d90250 748 Gene3D G3DSA:3.50.30.10 173 399 1.5E-56 T 14-10-2018 JV59_36710 8773da637a30f384c0a4e2f101d90250 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 JV59_36710 8773da637a30f384c0a4e2f101d90250 748 SUPERFAMILY SSF51621 425 714 6.28E-97 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JV59_36710 8773da637a30f384c0a4e2f101d90250 748 SMART SM00065 17 163 1.9E-23 T 14-10-2018 IPR003018 GAF domain GO:0005515 JV59_36710 8773da637a30f384c0a4e2f101d90250 748 Gene3D G3DSA:1.10.274.10 190 314 1.5E-56 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 JV59_36710 8773da637a30f384c0a4e2f101d90250 748 Gene3D G3DSA:3.30.450.40 1 163 7.5E-44 T 14-10-2018 IPR029016 GAF-like domain superfamily JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 Gene3D G3DSA:1.20.1640.10 522 1032 0.0 T 14-10-2018 JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 Gene3D G3DSA:3.30.2090.10 180 276 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 Gene3D G3DSA:3.30.70.1430 39 826 0.0 T 14-10-2018 JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 SUPERFAMILY SSF82714 184 273 2.35E-18 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 Gene3D G3DSA:1.20.1640.10 9 521 0.0 T 14-10-2018 JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 SUPERFAMILY SSF82866 297 498 2.22E-52 T 14-10-2018 JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 Gene3D G3DSA:3.30.2090.10 730 818 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 Gene3D G3DSA:3.30.70.1440 678 875 0.0 T 14-10-2018 JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 1.0E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 PRINTS PR00702 Acriflavin resistance protein family signature 630 644 1.0E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 1.0E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 1.0E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.0E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.0E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 PRINTS PR00702 Acriflavin resistance protein family signature 561 578 1.0E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 1.0E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 1.0E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 SUPERFAMILY SSF82693 137 331 1.55E-27 T 14-10-2018 JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 Gene3D G3DSA:3.30.70.1430 576 677 0.0 T 14-10-2018 JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 Gene3D G3DSA:3.30.70.1320 134 333 0.0 T 14-10-2018 JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 SUPERFAMILY SSF82693 681 866 1.15E-27 T 14-10-2018 JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 Pfam PF00873 AcrB/AcrD/AcrF family 2 1035 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 SUPERFAMILY SSF82693 574 680 8.63E-28 T 14-10-2018 JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 SUPERFAMILY SSF82693 40 133 2.44E-26 T 14-10-2018 JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 SUPERFAMILY SSF82714 731 817 1.96E-22 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1051 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 JV59_36010 86974df7f097eb8f1d1b3dda27cb84f2 1060 SUPERFAMILY SSF82866 840 1036 5.23E-45 T 14-10-2018 JV59_27990 35d806abb3dc70c0394709df61791cbb 237 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JV59_27990 35d806abb3dc70c0394709df61791cbb 237 SUPERFAMILY SSF51735 5 236 5.35E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_27990 35d806abb3dc70c0394709df61791cbb 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 1.8E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_27990 35d806abb3dc70c0394709df61791cbb 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.8E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_27990 35d806abb3dc70c0394709df61791cbb 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 1.8E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_27990 35d806abb3dc70c0394709df61791cbb 237 Gene3D G3DSA:3.40.50.720 3 237 7.9E-45 T 14-10-2018 JV59_27990 35d806abb3dc70c0394709df61791cbb 237 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 235 1.2E-26 T 14-10-2018 JV59_29000 2629e763e4a0e85ccdfbfdfd41be7cf1 320 SUPERFAMILY SSF161098 69 298 5.07E-19 T 14-10-2018 IPR035906 MetI-like superfamily JV59_29000 2629e763e4a0e85ccdfbfdfd41be7cf1 320 Gene3D G3DSA:1.10.3720.10 69 308 2.1E-21 T 14-10-2018 IPR035906 MetI-like superfamily JV59_29000 2629e763e4a0e85ccdfbfdfd41be7cf1 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 1.8E-40 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_27730 5a2ec2a38b326501b51fe63288ddbcf5 285 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site JV59_27730 5a2ec2a38b326501b51fe63288ddbcf5 285 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 239 5.9E-9 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel JV59_27730 5a2ec2a38b326501b51fe63288ddbcf5 285 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 3.7E-113 T 14-10-2018 IPR022522 Flagellar motor stator, MotA JV59_36185 5a2f4bb9989cdcc098286de7f70b4caf 394 Pfam PF05940 NnrS protein 15 388 6.2E-109 T 14-10-2018 IPR010266 NnrS JV59_22305 cf50698359264ef6da14190b089bfd6a 590 SUPERFAMILY SSF55729 315 451 3.13E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_22305 cf50698359264ef6da14190b089bfd6a 590 SUPERFAMILY SSF69593 38 254 2.75E-14 T 14-10-2018 JV59_22305 cf50698359264ef6da14190b089bfd6a 590 Gene3D G3DSA:3.40.630.30 313 454 5.9E-7 T 14-10-2018 JV59_22305 cf50698359264ef6da14190b089bfd6a 590 Pfam PF13444 Acetyltransferase (GNAT) domain 328 429 3.3E-20 T 14-10-2018 JV59_22305 cf50698359264ef6da14190b089bfd6a 590 Pfam PF01553 Acyltransferase 64 194 3.1E-8 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JV59_22305 cf50698359264ef6da14190b089bfd6a 590 SMART SM00563 74 197 1.6E-9 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JV59_21950 80f0d2fb7c6bd73fdaf038f1a033e6df 144 SUPERFAMILY SSF55729 2 135 6.92E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_21950 80f0d2fb7c6bd73fdaf038f1a033e6df 144 Gene3D G3DSA:3.40.630.30 2 137 1.4E-36 T 14-10-2018 JV59_21950 80f0d2fb7c6bd73fdaf038f1a033e6df 144 Pfam PF00583 Acetyltransferase (GNAT) family 33 125 3.7E-13 T 14-10-2018 IPR000182 GNAT domain JV59_35150 41ec1c8bcc199284c7c73b7f3ec12e6c 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JV59_35150 41ec1c8bcc199284c7c73b7f3ec12e6c 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 54.087 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 JV59_35150 41ec1c8bcc199284c7c73b7f3ec12e6c 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 301 4.2E-97 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 JV59_35150 41ec1c8bcc199284c7c73b7f3ec12e6c 310 SUPERFAMILY SSF53335 16 294 8.36E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_35150 41ec1c8bcc199284c7c73b7f3ec12e6c 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 8.5E-139 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 JV59_35150 41ec1c8bcc199284c7c73b7f3ec12e6c 310 Gene3D G3DSA:1.10.8.10 16 106 1.4E-5 T 14-10-2018 JV59_35150 41ec1c8bcc199284c7c73b7f3ec12e6c 310 Gene3D G3DSA:3.40.50.150 109 280 2.3E-46 T 14-10-2018 JV59_35150 41ec1c8bcc199284c7c73b7f3ec12e6c 310 PIRSF PIRSF037167 2 307 4.4E-150 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 JV59_35150 41ec1c8bcc199284c7c73b7f3ec12e6c 310 Pfam PF05175 Methyltransferase small domain 134 216 5.2E-18 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 JV59_31630 af8f047cea50206637c2767dc9b76510 172 SUPERFAMILY SSF54637 4 169 8.95E-57 T 14-10-2018 IPR029069 HotDog domain superfamily JV59_31630 af8f047cea50206637c2767dc9b76510 172 Gene3D G3DSA:3.10.129.10 2 172 3.7E-66 T 14-10-2018 JV59_31630 af8f047cea50206637c2767dc9b76510 172 Pfam PF07977 FabA-like domain 29 158 1.7E-54 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JV59_31630 af8f047cea50206637c2767dc9b76510 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.563 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JV59_31630 af8f047cea50206637c2767dc9b76510 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 2.0E-92 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JV59_38905 26f9f86091717d7a80ca5bcf024a79de 676 Gene3D G3DSA:3.30.1370.120 264 343 2.8E-17 T 14-10-2018 IPR038591 NolW-like superfamily JV59_38905 26f9f86091717d7a80ca5bcf024a79de 676 Gene3D G3DSA:3.30.1370.120 189 259 1.1E-20 T 14-10-2018 IPR038591 NolW-like superfamily JV59_38905 26f9f86091717d7a80ca5bcf024a79de 676 Gene3D G3DSA:3.30.1370.120 22 186 1.4E-52 T 14-10-2018 IPR038591 NolW-like superfamily JV59_38905 26f9f86091717d7a80ca5bcf024a79de 676 Pfam PF00263 Bacterial type II and III secretion system protein 450 614 8.6E-51 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 JV59_38905 26f9f86091717d7a80ca5bcf024a79de 676 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 559 592 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 JV59_38905 26f9f86091717d7a80ca5bcf024a79de 676 PRINTS PR01032 Gene IV protein signature 594 616 3.0E-12 T 14-10-2018 JV59_38905 26f9f86091717d7a80ca5bcf024a79de 676 PRINTS PR01032 Gene IV protein signature 541 569 3.0E-12 T 14-10-2018 JV59_38905 26f9f86091717d7a80ca5bcf024a79de 676 PRINTS PR01032 Gene IV protein signature 471 494 3.0E-12 T 14-10-2018 JV59_38905 26f9f86091717d7a80ca5bcf024a79de 676 Pfam PF03958 Bacterial type II/III secretion system short domain 267 345 1.7E-20 T 14-10-2018 IPR005644 NolW-like JV59_38905 26f9f86091717d7a80ca5bcf024a79de 676 Pfam PF03958 Bacterial type II/III secretion system short domain 126 187 1.0E-8 T 14-10-2018 IPR005644 NolW-like JV59_38905 26f9f86091717d7a80ca5bcf024a79de 676 Pfam PF03958 Bacterial type II/III secretion system short domain 192 259 7.7E-15 T 14-10-2018 IPR005644 NolW-like JV59_38905 26f9f86091717d7a80ca5bcf024a79de 676 PRINTS PR00811 Bacterial general secretion pathway protein D signature 578 596 2.6E-36 T 14-10-2018 IPR001775 GspD/PilQ family JV59_38905 26f9f86091717d7a80ca5bcf024a79de 676 PRINTS PR00811 Bacterial general secretion pathway protein D signature 481 491 2.6E-36 T 14-10-2018 IPR001775 GspD/PilQ family JV59_38905 26f9f86091717d7a80ca5bcf024a79de 676 PRINTS PR00811 Bacterial general secretion pathway protein D signature 601 615 2.6E-36 T 14-10-2018 IPR001775 GspD/PilQ family JV59_38905 26f9f86091717d7a80ca5bcf024a79de 676 PRINTS PR00811 Bacterial general secretion pathway protein D signature 345 355 2.6E-36 T 14-10-2018 IPR001775 GspD/PilQ family JV59_38905 26f9f86091717d7a80ca5bcf024a79de 676 PRINTS PR00811 Bacterial general secretion pathway protein D signature 446 470 2.6E-36 T 14-10-2018 IPR001775 GspD/PilQ family JV59_38905 26f9f86091717d7a80ca5bcf024a79de 676 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 31 623 1.1E-160 T 14-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 JV59_17550 153b9bb31a3787472abefa327666e982 473 Pfam PF00155 Aminotransferase class I and II 142 435 2.2E-24 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JV59_17550 153b9bb31a3787472abefa327666e982 473 Gene3D G3DSA:1.10.10.10 14 82 3.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_17550 153b9bb31a3787472abefa327666e982 473 SMART SM00345 22 81 4.2E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_17550 153b9bb31a3787472abefa327666e982 473 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 81 2.7E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_17550 153b9bb31a3787472abefa327666e982 473 Gene3D G3DSA:3.40.640.10 100 466 6.9E-107 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_17550 153b9bb31a3787472abefa327666e982 473 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 8.2E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_17550 153b9bb31a3787472abefa327666e982 473 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 8.2E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_17550 153b9bb31a3787472abefa327666e982 473 SUPERFAMILY SSF46785 16 82 2.73E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_17550 153b9bb31a3787472abefa327666e982 473 SUPERFAMILY SSF53383 111 472 4.87E-78 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_35905 dbc5d0735c0c7e5f30f44779ba8af073 72 SUPERFAMILY SSF161187 2 68 5.49E-25 T 14-10-2018 JV59_35905 dbc5d0735c0c7e5f30f44779ba8af073 72 Pfam PF07191 zinc-ribbons 3 66 1.0E-25 T 14-10-2018 IPR010807 Protein of unknown function DUF1407 JV59_35905 dbc5d0735c0c7e5f30f44779ba8af073 72 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 4 66 1.0E-20 T 14-10-2018 IPR010807 Protein of unknown function DUF1407 JV59_35905 dbc5d0735c0c7e5f30f44779ba8af073 72 Gene3D G3DSA:2.10.290.10 1 69 1.0E-25 T 14-10-2018 IPR029037 YfgJ-like JV59_16935 cbac340593c48932642f22c70f136fad 334 Gene3D G3DSA:3.40.50.720 2 127 7.3E-20 T 14-10-2018 JV59_16935 cbac340593c48932642f22c70f136fad 334 SUPERFAMILY SSF52540 2 331 2.47E-100 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_16935 cbac340593c48932642f22c70f136fad 334 Gene3D G3DSA:3.40.50.300 128 333 5.2E-74 T 14-10-2018 JV59_16935 cbac340593c48932642f22c70f136fad 334 PIRSF PIRSF026760 3 334 1.3E-96 T 14-10-2018 IPR011669 Uncharacterised conserved protein UCP026760 JV59_16935 cbac340593c48932642f22c70f136fad 334 Pfam PF17396 Domain of unknown function (DUF1611_N) Rossmann-like domain 47 124 9.2E-22 T 14-10-2018 IPR035402 Domain of unknown function DUF1611-N, Rossmann-like domain JV59_16935 cbac340593c48932642f22c70f136fad 334 Pfam PF07755 Domain of unknown function (DUF1611_C) P-loop domain 131 327 1.5E-71 T 14-10-2018 IPR035086 Domain of unknown function DUF1611, P-loop JV59_35685 50dd90e0c1f8cf0dee56361df2b9d3a5 169 SUPERFAMILY SSF53927 5 159 9.87E-57 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 JV59_35685 50dd90e0c1f8cf0dee56361df2b9d3a5 169 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 14 155 45.093 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 JV59_35685 50dd90e0c1f8cf0dee56361df2b9d3a5 169 Gene3D G3DSA:3.40.140.10 3 168 1.5E-64 T 14-10-2018 JV59_35685 50dd90e0c1f8cf0dee56361df2b9d3a5 169 Pfam PF14437 MafB19-like deaminase 11 155 4.0E-30 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 JV59_35685 50dd90e0c1f8cf0dee56361df2b9d3a5 169 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 96 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 JV59_36195 657dd09ff302732f070b2a4525479b34 258 SUPERFAMILY SSF55594 28 88 2.88E-5 T 14-10-2018 IPR035895 HPr-like superfamily JV59_36195 657dd09ff302732f070b2a4525479b34 258 SUPERFAMILY SSF55804 119 252 5.89E-23 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 JV59_36195 657dd09ff302732f070b2a4525479b34 258 PIRSF PIRSF029195 1 258 1.0E-34 T 14-10-2018 IPR016910 Uncharacterised conserved protein UCP029195, PTS-EIIA 2 JV59_36195 657dd09ff302732f070b2a4525479b34 258 Gene3D G3DSA:3.40.930.10 117 254 3.3E-23 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 JV59_36195 657dd09ff302732f070b2a4525479b34 258 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 125 253 1.8E-21 T 14-10-2018 IPR002178 PTS EIIA type-2 domain JV59_24915 68e2f139e4b36bdc987b41125154ef50 318 Pfam PF12833 Helix-turn-helix domain 224 303 1.4E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_24915 68e2f139e4b36bdc987b41125154ef50 318 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 285 301 1.5E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_24915 68e2f139e4b36bdc987b41125154ef50 318 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 270 285 1.5E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_24915 68e2f139e4b36bdc987b41125154ef50 318 Gene3D G3DSA:1.10.10.60 199 308 1.1E-25 T 14-10-2018 JV59_24915 68e2f139e4b36bdc987b41125154ef50 318 SMART SM00342 218 301 1.5E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_24915 68e2f139e4b36bdc987b41125154ef50 318 SUPERFAMILY SSF52317 3 181 1.13E-25 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_24915 68e2f139e4b36bdc987b41125154ef50 318 Gene3D G3DSA:3.40.50.880 1 188 2.2E-33 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_24915 68e2f139e4b36bdc987b41125154ef50 318 Pfam PF01965 DJ-1/PfpI family 61 163 3.1E-7 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 JV59_24915 68e2f139e4b36bdc987b41125154ef50 318 SUPERFAMILY SSF46689 254 306 7.62E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_38795 1d8a5743eeddfcccf3039218e7235845 692 Pfam PF17191 RecG wedge domain 13 171 4.7E-23 T 14-10-2018 IPR033454 RecG, wedge domain JV59_38795 1d8a5743eeddfcccf3039218e7235845 692 Pfam PF00271 Helicase conserved C-terminal domain 479 587 7.0E-17 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_38795 1d8a5743eeddfcccf3039218e7235845 692 SUPERFAMILY SSF52540 213 452 1.26E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_38795 1d8a5743eeddfcccf3039218e7235845 692 SUPERFAMILY SSF52540 291 652 1.74E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_38795 1d8a5743eeddfcccf3039218e7235845 692 SMART SM00490 504 588 2.1E-21 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_38795 1d8a5743eeddfcccf3039218e7235845 692 SUPERFAMILY SSF50249 8 173 8.91E-41 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_38795 1d8a5743eeddfcccf3039218e7235845 692 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 663 1.7E-236 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 JV59_38795 1d8a5743eeddfcccf3039218e7235845 692 SMART SM00487 264 458 3.5E-32 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JV59_38795 1d8a5743eeddfcccf3039218e7235845 692 Gene3D G3DSA:2.40.50.140 46 138 3.8E-13 T 14-10-2018 JV59_38795 1d8a5743eeddfcccf3039218e7235845 692 Gene3D G3DSA:3.40.50.300 456 629 1.0E-52 T 14-10-2018 JV59_38795 1d8a5743eeddfcccf3039218e7235845 692 Gene3D G3DSA:3.40.50.300 207 449 1.9E-83 T 14-10-2018 JV59_38795 1d8a5743eeddfcccf3039218e7235845 692 Pfam PF00270 DEAD/DEAH box helicase 271 430 1.1E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JV59_38795 1d8a5743eeddfcccf3039218e7235845 692 Gene3D G3DSA:1.10.150.20 1 40 4.6E-5 T 14-10-2018 JV59_29995 78b8fd52919656c65c8c20828d56c17f 516 Gene3D G3DSA:1.20.1720.10 27 223 1.9E-40 T 14-10-2018 JV59_29995 78b8fd52919656c65c8c20828d56c17f 516 SUPERFAMILY SSF103473 12 514 4.45E-62 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_29995 78b8fd52919656c65c8c20828d56c17f 516 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 25 511 1.4E-121 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 JV59_29995 78b8fd52919656c65c8c20828d56c17f 516 Gene3D G3DSA:1.20.1250.20 272 516 4.9E-9 T 14-10-2018 JV59_29995 78b8fd52919656c65c8c20828d56c17f 516 ProSitePatterns PS00217 Sugar transport proteins signature 2. 119 144 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JV59_29995 78b8fd52919656c65c8c20828d56c17f 516 Pfam PF07690 Major Facilitator Superfamily 28 421 8.4E-45 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_18645 dabd3fa40cda6d9da309631e83f9971d 681 Pfam PF00072 Response regulator receiver domain 565 677 9.0E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_18645 dabd3fa40cda6d9da309631e83f9971d 681 SMART SM00448 563 677 4.3E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_18645 dabd3fa40cda6d9da309631e83f9971d 681 SUPERFAMILY SSF47384 171 234 9.42E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_18645 dabd3fa40cda6d9da309631e83f9971d 681 Gene3D G3DSA:3.30.565.10 265 416 5.9E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_18645 dabd3fa40cda6d9da309631e83f9971d 681 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 310 411 3.4E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_18645 dabd3fa40cda6d9da309631e83f9971d 681 SMART SM00387 305 413 2.0E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_18645 dabd3fa40cda6d9da309631e83f9971d 681 Gene3D G3DSA:3.40.50.2300 554 681 2.5E-32 T 14-10-2018 JV59_18645 dabd3fa40cda6d9da309631e83f9971d 681 SUPERFAMILY SSF55874 250 415 2.36E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_18645 dabd3fa40cda6d9da309631e83f9971d 681 Gene3D G3DSA:1.10.287.130 168 255 3.8E-6 T 14-10-2018 JV59_18645 dabd3fa40cda6d9da309631e83f9971d 681 SUPERFAMILY SSF52172 563 681 1.1E-31 T 14-10-2018 IPR011006 CheY-like superfamily JV59_18645 dabd3fa40cda6d9da309631e83f9971d 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 410 1.7E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_18645 dabd3fa40cda6d9da309631e83f9971d 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 391 1.7E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_18645 dabd3fa40cda6d9da309631e83f9971d 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 371 1.7E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_18645 dabd3fa40cda6d9da309631e83f9971d 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 357 1.7E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_19325 74c9142df7a9216ea774580624f218aa 244 Gene3D G3DSA:3.20.20.370 5 244 4.9E-101 T 14-10-2018 JV59_19325 74c9142df7a9216ea774580624f218aa 244 Pfam PF03746 LamB/YcsF family 6 244 2.6E-97 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 JV59_19325 74c9142df7a9216ea774580624f218aa 244 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 4 244 41.992 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 JV59_19325 74c9142df7a9216ea774580624f218aa 244 SUPERFAMILY SSF88713 5 244 1.63E-94 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 JV59_01225 8d84e7ddef06620aaf58cecfbc1bd18c 411 Gene3D G3DSA:3.30.160.390 5 104 1.1E-7 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily JV59_01225 8d84e7ddef06620aaf58cecfbc1bd18c 411 SUPERFAMILY SSF56349 112 407 1.03E-55 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JV59_01225 8d84e7ddef06620aaf58cecfbc1bd18c 411 Pfam PF13356 Arm DNA-binding domain 7 87 9.0E-9 T 14-10-2018 IPR025166 Integrase, DNA-binding domain JV59_01225 8d84e7ddef06620aaf58cecfbc1bd18c 411 Pfam PF00589 Phage integrase family 263 399 4.0E-35 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JV59_01225 8d84e7ddef06620aaf58cecfbc1bd18c 411 Gene3D G3DSA:1.10.443.10 228 411 1.4E-43 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JV59_01225 8d84e7ddef06620aaf58cecfbc1bd18c 411 Gene3D G3DSA:1.10.150.130 105 205 1.2E-9 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal JV59_31265 fe4714bae44eb7d538f68abab854c438 347 Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain 65 198 7.9E-16 T 14-10-2018 IPR001099 Chalcone/stilbene synthase, N-terminal JV59_31265 fe4714bae44eb7d538f68abab854c438 347 Gene3D G3DSA:3.40.47.10 205 347 1.2E-37 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_31265 fe4714bae44eb7d538f68abab854c438 347 Gene3D G3DSA:3.40.47.10 1 202 1.9E-56 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_31265 fe4714bae44eb7d538f68abab854c438 347 SUPERFAMILY SSF53901 206 345 3.99E-31 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_31265 fe4714bae44eb7d538f68abab854c438 347 PIRSF PIRSF000451 1 347 1.3E-95 T 14-10-2018 IPR011141 Polyketide synthase, type III GO:0009058|GO:0016747 JV59_31265 fe4714bae44eb7d538f68abab854c438 347 Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain 208 341 9.5E-19 T 14-10-2018 IPR012328 Chalcone/stilbene synthase, C-terminal JV59_31265 fe4714bae44eb7d538f68abab854c438 347 SUPERFAMILY SSF53901 4 201 1.54E-40 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_29010 83b7bf16306a5cc307a3ccad9e8d044c 332 SUPERFAMILY SSF52540 4 247 3.3E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_29010 83b7bf16306a5cc307a3ccad9e8d044c 332 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 292 309 1.1E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_29010 83b7bf16306a5cc307a3ccad9e8d044c 332 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 309 329 1.1E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_29010 83b7bf16306a5cc307a3ccad9e8d044c 332 Gene3D G3DSA:1.10.10.60 263 330 2.7E-7 T 14-10-2018 JV59_29010 83b7bf16306a5cc307a3ccad9e8d044c 332 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JV59_29010 83b7bf16306a5cc307a3ccad9e8d044c 332 Gene3D G3DSA:3.40.50.300 1 176 1.8E-58 T 14-10-2018 JV59_29010 83b7bf16306a5cc307a3ccad9e8d044c 332 SMART SM00382 25 177 1.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_29010 83b7bf16306a5cc307a3ccad9e8d044c 332 Pfam PF00158 Sigma-54 interaction domain 5 168 7.2E-57 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JV59_29010 83b7bf16306a5cc307a3ccad9e8d044c 332 Pfam PF02954 Bacterial regulatory protein, Fis family 292 326 2.3E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_29010 83b7bf16306a5cc307a3ccad9e8d044c 332 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site JV59_29010 83b7bf16306a5cc307a3ccad9e8d044c 332 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 5 326 2.2E-160 T 14-10-2018 IPR014317 Transcription activator PspF JV59_29010 83b7bf16306a5cc307a3ccad9e8d044c 332 SUPERFAMILY SSF46689 219 328 7.17E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_29010 83b7bf16306a5cc307a3ccad9e8d044c 332 Gene3D G3DSA:1.10.8.60 177 262 1.9E-26 T 14-10-2018 JV59_27725 4d46ddb732851722d18b37ba47360220 330 Pfam PF00691 OmpA family 170 266 1.6E-11 T 14-10-2018 IPR006665 OmpA-like domain JV59_27725 4d46ddb732851722d18b37ba47360220 330 Gene3D G3DSA:3.30.1330.60 123 305 1.7E-42 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_27725 4d46ddb732851722d18b37ba47360220 330 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 16 64 4.3E-16 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain JV59_27725 4d46ddb732851722d18b37ba47360220 330 SUPERFAMILY SSF103088 154 274 1.44E-19 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_29500 6432ab34426235b9dad8abcd2621f21e 423 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 141 339 3.5E-8 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JV59_29500 6432ab34426235b9dad8abcd2621f21e 423 Gene3D G3DSA:2.40.50.100 96 258 8.2E-43 T 14-10-2018 JV59_29500 6432ab34426235b9dad8abcd2621f21e 423 Gene3D G3DSA:2.40.420.20 347 404 8.2E-43 T 14-10-2018 JV59_29500 6432ab34426235b9dad8abcd2621f21e 423 SUPERFAMILY SSF111369 95 343 3.01E-11 T 14-10-2018 JV59_29500 6432ab34426235b9dad8abcd2621f21e 423 Gene3D G3DSA:2.40.30.170 260 346 8.2E-43 T 14-10-2018 JV59_29500 6432ab34426235b9dad8abcd2621f21e 423 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 197 419 1.2E-35 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 JV59_29500 6432ab34426235b9dad8abcd2621f21e 423 Gene3D G3DSA:1.10.287.470 108 213 8.2E-43 T 14-10-2018 JV59_32880 03f0ffd5e268b94b56288c2ef9f2573d 158 Gene3D G3DSA:1.20.1260.10 2 157 1.1E-53 T 14-10-2018 IPR012347 Ferritin-like JV59_32880 03f0ffd5e268b94b56288c2ef9f2573d 158 Pfam PF00210 Ferritin-like domain 21 157 1.3E-25 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 JV59_32880 03f0ffd5e268b94b56288c2ef9f2573d 158 SUPERFAMILY SSF47240 5 157 2.26E-42 T 14-10-2018 IPR009078 Ferritin-like superfamily JV59_32880 03f0ffd5e268b94b56288c2ef9f2573d 158 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 64 80 1.4E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps JV59_32880 03f0ffd5e268b94b56288c2ef9f2573d 158 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 40 56 1.4E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps JV59_32880 03f0ffd5e268b94b56288c2ef9f2573d 158 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 135 153 1.4E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps JV59_32880 03f0ffd5e268b94b56288c2ef9f2573d 158 ProSitePatterns PS00818 Dps protein family signature 1. 40 56 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 JV59_32880 03f0ffd5e268b94b56288c2ef9f2573d 158 PIRSF PIRSF005900 1 158 4.7E-45 T 14-10-2018 IPR002177 DNA-binding protein Dps JV59_32880 03f0ffd5e268b94b56288c2ef9f2573d 158 ProSitePatterns PS00819 Dps protein family signature 2. 66 80 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 JV59_27130 0c77f8dd470b1eacf0c9403ef7dd5e55 384 Gene3D G3DSA:3.30.9.50 80 266 6.1E-96 T 14-10-2018 JV59_27130 0c77f8dd470b1eacf0c9403ef7dd5e55 384 Pfam PF00890 FAD binding domain 5 48 1.8E-4 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_27130 0c77f8dd470b1eacf0c9403ef7dd5e55 384 SUPERFAMILY SSF51905 4 376 6.48E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_27130 0c77f8dd470b1eacf0c9403ef7dd5e55 384 Gene3D G3DSA:3.50.50.60 5 330 6.1E-96 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_27130 0c77f8dd470b1eacf0c9403ef7dd5e55 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.2E-16 T 14-10-2018 JV59_27130 0c77f8dd470b1eacf0c9403ef7dd5e55 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 1.2E-16 T 14-10-2018 JV59_27130 0c77f8dd470b1eacf0c9403ef7dd5e55 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 1.2E-16 T 14-10-2018 JV59_27130 0c77f8dd470b1eacf0c9403ef7dd5e55 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 1.2E-16 T 14-10-2018 JV59_27130 0c77f8dd470b1eacf0c9403ef7dd5e55 384 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 382 2.1E-111 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 JV59_27130 0c77f8dd470b1eacf0c9403ef7dd5e55 384 Pfam PF01494 FAD binding domain 151 332 1.8E-19 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 JV59_38655 e4bb6030cdb6c1393052a1629f342086 56 Gene3D G3DSA:2.20.28.120 1 56 1.2E-28 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_38655 e4bb6030cdb6c1393052a1629f342086 56 SUPERFAMILY SSF57829 3 54 7.32E-19 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 JV59_38655 e4bb6030cdb6c1393052a1629f342086 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 1.4E-26 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_38655 e4bb6030cdb6c1393052a1629f342086 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_38655 e4bb6030cdb6c1393052a1629f342086 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 14.671 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_38655 e4bb6030cdb6c1393052a1629f342086 56 Pfam PF00471 Ribosomal protein L33 8 54 1.2E-16 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_02035 d2ee945f39db8bd2fb09098d3132d30f 452 SUPERFAMILY SSF63418 1 95 3.01E-25 T 14-10-2018 IPR035911 MurE/MurF, N-terminal JV59_02035 d2ee945f39db8bd2fb09098d3132d30f 452 SUPERFAMILY SSF53623 100 311 1.57E-56 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JV59_02035 d2ee945f39db8bd2fb09098d3132d30f 452 Pfam PF01225 Mur ligase family, catalytic domain 24 87 1.0E-8 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 JV59_02035 d2ee945f39db8bd2fb09098d3132d30f 452 SUPERFAMILY SSF53244 314 447 6.71E-33 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JV59_02035 d2ee945f39db8bd2fb09098d3132d30f 452 Gene3D G3DSA:3.90.190.20 313 452 1.4E-35 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JV59_02035 d2ee945f39db8bd2fb09098d3132d30f 452 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 448 33.639 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JV59_02035 d2ee945f39db8bd2fb09098d3132d30f 452 Gene3D G3DSA:3.40.1190.10 81 312 9.6E-77 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JV59_02035 d2ee945f39db8bd2fb09098d3132d30f 452 Pfam PF08245 Mur ligase middle domain 105 293 1.9E-48 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 JV59_02035 d2ee945f39db8bd2fb09098d3132d30f 452 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 447 8.1E-142 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JV59_02035 d2ee945f39db8bd2fb09098d3132d30f 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 392 2.7E-13 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 JV59_02035 d2ee945f39db8bd2fb09098d3132d30f 452 Gene3D G3DSA:3.40.1390.10 1 80 1.5E-27 T 14-10-2018 JV59_21895 8e494179a3faadf169a96705fef3b2e5 299 Gene3D G3DSA:1.10.3720.10 96 288 1.8E-33 T 14-10-2018 IPR035906 MetI-like superfamily JV59_21895 8e494179a3faadf169a96705fef3b2e5 299 SUPERFAMILY SSF161098 99 281 2.75E-37 T 14-10-2018 IPR035906 MetI-like superfamily JV59_21895 8e494179a3faadf169a96705fef3b2e5 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 278 4.6E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_26735 ef819c7e144755821c4ab4364273b92e 202 SUPERFAMILY SSF52317 3 190 6.39E-48 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_26735 ef819c7e144755821c4ab4364273b92e 202 Pfam PF01965 DJ-1/PfpI family 3 169 8.6E-43 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 JV59_26735 ef819c7e144755821c4ab4364273b92e 202 Gene3D G3DSA:3.40.50.880 1 194 5.5E-52 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_26735 ef819c7e144755821c4ab4364273b92e 202 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 183 8.1E-65 T 14-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 JV59_35640 8aedcf00f23324ef215815d77a706895 344 Gene3D G3DSA:3.10.290.10 1 59 1.6E-22 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 JV59_35640 8aedcf00f23324ef215815d77a706895 344 Pfam PF00849 RNA pseudouridylate synthase 67 193 3.8E-14 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_35640 8aedcf00f23324ef215815d77a706895 344 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 223 2.4E-47 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 JV59_35640 8aedcf00f23324ef215815d77a706895 344 SUPERFAMILY SSF55174 7 59 1.28E-14 T 14-10-2018 JV59_35640 8aedcf00f23324ef215815d77a706895 344 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 JV59_35640 8aedcf00f23324ef215815d77a706895 344 SUPERFAMILY SSF55120 66 227 2.62E-38 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_35640 8aedcf00f23324ef215815d77a706895 344 Gene3D G3DSA:3.30.70.580 68 227 6.8E-54 T 14-10-2018 JV59_35640 8aedcf00f23324ef215815d77a706895 344 Gene3D G3DSA:3.30.70.1560 132 205 6.8E-54 T 14-10-2018 JV59_35640 8aedcf00f23324ef215815d77a706895 344 SMART SM00363 6 74 7.0E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_35640 8aedcf00f23324ef215815d77a706895 344 Pfam PF01479 S4 domain 7 51 4.7E-12 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_23030 bb6c4aee4faf1753dfeb875c7361366b 365 Gene3D G3DSA:3.40.50.2300 31 361 5.3E-95 T 14-10-2018 JV59_23030 bb6c4aee4faf1753dfeb875c7361366b 365 Pfam PF13407 Periplasmic binding protein domain 65 322 1.3E-10 T 14-10-2018 IPR025997 Periplasmic binding protein JV59_23030 bb6c4aee4faf1753dfeb875c7361366b 365 SUPERFAMILY SSF53822 31 361 2.36E-46 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_23030 bb6c4aee4faf1753dfeb875c7361366b 365 Gene3D G3DSA:3.40.50.2300 175 357 5.3E-95 T 14-10-2018 JV59_30480 24837f012d5bb04c0af25116e5dd1a3b 335 SUPERFAMILY SSF56524 79 331 1.31E-93 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 JV59_30480 24837f012d5bb04c0af25116e5dd1a3b 335 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 9 335 54.697 T 14-10-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 JV59_30480 24837f012d5bb04c0af25116e5dd1a3b 335 Gene3D G3DSA:3.90.420.10 67 335 1.8E-115 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 JV59_30480 24837f012d5bb04c0af25116e5dd1a3b 335 Pfam PF00174 Oxidoreductase molybdopterin binding domain 113 268 7.4E-32 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 JV59_33025 c282319305e7b2c5b00afb3e812f1e75 507 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 326 488 3.3E-51 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 JV59_33025 c282319305e7b2c5b00afb3e812f1e75 507 PIRSF PIRSF001394 1 507 2.5E-216 T 14-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 JV59_33025 c282319305e7b2c5b00afb3e812f1e75 507 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 5.6E-98 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 JV59_33025 c282319305e7b2c5b00afb3e812f1e75 507 Pfam PF05683 Fumarase C-terminus 289 490 4.6E-83 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 JV59_33025 c282319305e7b2c5b00afb3e812f1e75 507 Gene3D G3DSA:3.20.130.10 308 490 1.3E-61 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 JV59_33025 c282319305e7b2c5b00afb3e812f1e75 507 SUPERFAMILY SSF117457 317 489 1.44E-63 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 JV59_33025 c282319305e7b2c5b00afb3e812f1e75 507 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 1.3E-62 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 JV59_38260 9f9378e428a8bab1f6fcd4ba548dfa87 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 185 209 3.4E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JV59_38260 9f9378e428a8bab1f6fcd4ba548dfa87 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 18 35 3.4E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JV59_38260 9f9378e428a8bab1f6fcd4ba548dfa87 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 68 95 3.4E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JV59_38260 9f9378e428a8bab1f6fcd4ba548dfa87 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 144 164 3.4E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JV59_38260 9f9378e428a8bab1f6fcd4ba548dfa87 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 210 234 3.4E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JV59_38260 9f9378e428a8bab1f6fcd4ba548dfa87 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 250 267 3.4E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JV59_38260 9f9378e428a8bab1f6fcd4ba548dfa87 344 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 200 221 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JV59_38260 9f9378e428a8bab1f6fcd4ba548dfa87 344 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 192 330 5.2E-52 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JV59_38260 9f9378e428a8bab1f6fcd4ba548dfa87 344 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 16 171 5.3E-46 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JV59_38260 9f9378e428a8bab1f6fcd4ba548dfa87 344 SUPERFAMILY SSF51735 16 190 3.34E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_38260 9f9378e428a8bab1f6fcd4ba548dfa87 344 Gene3D G3DSA:3.40.50.720 6 199 3.4E-50 T 14-10-2018 JV59_38260 9f9378e428a8bab1f6fcd4ba548dfa87 344 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 14 334 36.904 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JV59_38260 9f9378e428a8bab1f6fcd4ba548dfa87 344 Gene3D G3DSA:1.10.1040.10 201 344 1.5E-53 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JV59_38260 9f9378e428a8bab1f6fcd4ba548dfa87 344 PIRSF PIRSF000114 11 344 8.6E-96 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JV59_38260 9f9378e428a8bab1f6fcd4ba548dfa87 344 SUPERFAMILY SSF48179 192 343 5.36E-56 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JV59_28185 86b5082f8472403a6ec1547fe95a81a6 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 6.7E-32 T 14-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 JV59_28185 86b5082f8472403a6ec1547fe95a81a6 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 215 1.1E-30 T 14-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 JV59_28185 86b5082f8472403a6ec1547fe95a81a6 220 SUPERFAMILY SSF63848 113 216 5.75E-30 T 14-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 JV59_28185 86b5082f8472403a6ec1547fe95a81a6 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 27.943 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 JV59_28185 86b5082f8472403a6ec1547fe95a81a6 220 Gene3D G3DSA:3.30.750.120 1 112 4.5E-34 T 14-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily JV59_28185 86b5082f8472403a6ec1547fe95a81a6 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 216 4.1E-75 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 JV59_28185 86b5082f8472403a6ec1547fe95a81a6 220 Gene3D G3DSA:2.160.20.70 113 220 4.4E-30 T 14-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 JV59_27815 98102561d2c4ec41849aba9ac87344f6 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 411 431 2.7E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_27815 98102561d2c4ec41849aba9ac87344f6 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 394 411 2.7E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_27815 98102561d2c4ec41849aba9ac87344f6 443 SMART SM00382 145 288 6.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_27815 98102561d2c4ec41849aba9ac87344f6 443 Pfam PF00158 Sigma-54 interaction domain 126 291 1.2E-69 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JV59_27815 98102561d2c4ec41849aba9ac87344f6 443 Gene3D G3DSA:3.40.50.300 116 295 4.5E-66 T 14-10-2018 JV59_27815 98102561d2c4ec41849aba9ac87344f6 443 Gene3D G3DSA:3.40.50.2300 4 115 7.1E-10 T 14-10-2018 JV59_27815 98102561d2c4ec41849aba9ac87344f6 443 SUPERFAMILY SSF52172 3 170 3.84E-17 T 14-10-2018 IPR011006 CheY-like superfamily JV59_27815 98102561d2c4ec41849aba9ac87344f6 443 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 211 226 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JV59_27815 98102561d2c4ec41849aba9ac87344f6 443 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 149 162 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JV59_27815 98102561d2c4ec41849aba9ac87344f6 443 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 335 344 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site JV59_27815 98102561d2c4ec41849aba9ac87344f6 443 SUPERFAMILY SSF52540 129 364 1.96E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_27815 98102561d2c4ec41849aba9ac87344f6 443 Pfam PF02954 Bacterial regulatory protein, Fis family 390 426 2.1E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_27815 98102561d2c4ec41849aba9ac87344f6 443 Gene3D G3DSA:1.10.10.60 370 435 2.2E-10 T 14-10-2018 JV59_27815 98102561d2c4ec41849aba9ac87344f6 443 SUPERFAMILY SSF46689 335 426 1.61E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_27815 98102561d2c4ec41849aba9ac87344f6 443 Gene3D G3DSA:1.10.8.60 296 369 1.2E-22 T 14-10-2018 JV59_24355 586cdcec81b656b19d1d7b5f7fbbdb1f 182 Gene3D G3DSA:2.40.320.10 1 182 2.1E-47 T 14-10-2018 JV59_24355 586cdcec81b656b19d1d7b5f7fbbdb1f 182 SMART SM01118 9 180 1.8E-14 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 JV59_24355 586cdcec81b656b19d1d7b5f7fbbdb1f 182 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 11 138 6.0E-10 T 14-10-2018 JV59_24355 586cdcec81b656b19d1d7b5f7fbbdb1f 182 TIGRFAM TIGR00318 cyaB: putative adenylyl cyclase CyaB 10 177 2.8E-17 T 14-10-2018 IPR008173 Adenylyl cyclase CyaB KEGG: 00230+4.6.1.1 JV59_24355 586cdcec81b656b19d1d7b5f7fbbdb1f 182 SUPERFAMILY SSF55154 7 178 2.29E-38 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 JV59_24355 586cdcec81b656b19d1d7b5f7fbbdb1f 182 Pfam PF01928 CYTH domain 10 159 2.1E-17 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 JV59_34350 7a01129db4019e3e06fa5ab278d1b81d 404 Gene3D G3DSA:3.90.1150.10 21 398 4.6E-145 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_34350 7a01129db4019e3e06fa5ab278d1b81d 404 Gene3D G3DSA:3.40.640.10 53 294 4.6E-145 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_34350 7a01129db4019e3e06fa5ab278d1b81d 404 Pfam PF00155 Aminotransferase class I and II 61 391 1.3E-48 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JV59_34350 7a01129db4019e3e06fa5ab278d1b81d 404 SUPERFAMILY SSF53383 5 400 5.92E-95 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_34405 491f60418a69b5bbd8db419957ac91df 466 SUPERFAMILY SSF56672 12 225 2.11E-30 T 14-10-2018 JV59_34405 491f60418a69b5bbd8db419957ac91df 466 Gene3D G3DSA:2.30.40.20 29 68 3.3E-6 T 14-10-2018 JV59_34405 491f60418a69b5bbd8db419957ac91df 466 Gene3D G3DSA:1.10.150.20 167 207 3.3E-6 T 14-10-2018 JV59_34405 491f60418a69b5bbd8db419957ac91df 466 Gene3D G3DSA:3.30.70.270 69 166 3.3E-6 T 14-10-2018 JV59_25645 3dd4e67fcd9d19971d60ac85963b6743 966 SUPERFAMILY SSF47413 17 83 5.0E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_25645 3dd4e67fcd9d19971d60ac85963b6743 966 SUPERFAMILY SSF52540 238 485 3.02E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_25645 3dd4e67fcd9d19971d60ac85963b6743 966 Gene3D G3DSA:1.10.260.40 8 86 4.4E-8 T 14-10-2018 JV59_25645 3dd4e67fcd9d19971d60ac85963b6743 966 Pfam PF13191 AAA ATPase domain 240 417 1.4E-13 T 14-10-2018 JV59_25645 3dd4e67fcd9d19971d60ac85963b6743 966 SMART SM00530 18 77 0.0043 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_21490 f72e44c16c21d545b7f8b1f975c50c6a 553 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 552 20.286 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 JV59_21490 f72e44c16c21d545b7f8b1f975c50c6a 553 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 551 6.1E-227 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 JV59_21490 f72e44c16c21d545b7f8b1f975c50c6a 553 SUPERFAMILY SSF56821 1 551 3.14E-197 T 14-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 JV59_21490 f72e44c16c21d545b7f8b1f975c50c6a 553 PIRSF PIRSF000076 1 553 1.7E-243 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 JV59_21490 f72e44c16c21d545b7f8b1f975c50c6a 553 Gene3D G3DSA:1.20.1270.20 1 143 5.9E-39 T 14-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 JV59_21490 f72e44c16c21d545b7f8b1f975c50c6a 553 Gene3D G3DSA:3.40.50.2030 237 382 2.0E-63 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 JV59_21490 f72e44c16c21d545b7f8b1f975c50c6a 553 Pfam PF03063 Prismane/CO dehydrogenase family 1 548 1.3E-163 T 14-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 JV59_21490 f72e44c16c21d545b7f8b1f975c50c6a 553 Gene3D G3DSA:1.20.1270.20 153 235 4.8E-28 T 14-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 JV59_21490 f72e44c16c21d545b7f8b1f975c50c6a 553 Gene3D G3DSA:3.40.50.2030 383 551 8.8E-60 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 JV59_29415 2fd380e5acd1ed4f1cd2524644bc17e5 339 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 328 5.6E-52 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 JV59_16555 866558dd8f3e61d269807abf50196e75 331 SMART SM00020 26 275 4.8E-34 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 JV59_16555 866558dd8f3e61d269807abf50196e75 331 Gene3D G3DSA:2.40.10.10 19 279 8.9E-46 T 14-10-2018 JV59_16555 866558dd8f3e61d269807abf50196e75 331 SUPERFAMILY SSF50494 6 281 5.62E-50 T 14-10-2018 IPR009003 Peptidase S1, PA clan JV59_16555 866558dd8f3e61d269807abf50196e75 331 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 123 137 5.4E-15 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 JV59_16555 866558dd8f3e61d269807abf50196e75 331 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 62 77 5.4E-15 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 JV59_16555 866558dd8f3e61d269807abf50196e75 331 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 221 233 5.4E-15 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 JV59_16555 866558dd8f3e61d269807abf50196e75 331 Pfam PF00089 Trypsin 49 275 2.0E-31 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 JV59_16555 866558dd8f3e61d269807abf50196e75 331 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 222 233 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site JV59_16555 866558dd8f3e61d269807abf50196e75 331 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 72 77 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 JV59_18005 8fd2bd8759821cce5e217bec1d7c69e1 370 SMART SM00382 32 215 9.5E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_18005 8fd2bd8759821cce5e217bec1d7c69e1 370 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_18005 8fd2bd8759821cce5e217bec1d7c69e1 370 Gene3D G3DSA:3.40.50.300 7 225 1.1E-69 T 14-10-2018 JV59_18005 8fd2bd8759821cce5e217bec1d7c69e1 370 Pfam PF08402 TOBE domain 279 349 2.6E-5 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 JV59_18005 8fd2bd8759821cce5e217bec1d7c69e1 370 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 5 357 1.1E-158 T 14-10-2018 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 JV59_18005 8fd2bd8759821cce5e217bec1d7c69e1 370 SUPERFAMILY SSF52540 8 245 7.45E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_18005 8fd2bd8759821cce5e217bec1d7c69e1 370 SUPERFAMILY SSF50331 240 349 1.22E-10 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal JV59_18005 8fd2bd8759821cce5e217bec1d7c69e1 370 Pfam PF00005 ABC transporter 23 165 1.2E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_18005 8fd2bd8759821cce5e217bec1d7c69e1 370 Gene3D G3DSA:2.40.50.140 286 320 1.9E-14 T 14-10-2018 JV59_18005 8fd2bd8759821cce5e217bec1d7c69e1 370 Gene3D G3DSA:2.40.50.940 226 285 1.9E-14 T 14-10-2018 JV59_34525 b3b5ba4b22efc474cdf195825709143e 193 PIRSF PIRSF006305 1 192 9.0E-47 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 JV59_34525 b3b5ba4b22efc474cdf195825709143e 193 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 30.933 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 JV59_34525 b3b5ba4b22efc474cdf195825709143e 193 Gene3D G3DSA:3.90.950.10 4 193 1.7E-61 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like JV59_34525 b3b5ba4b22efc474cdf195825709143e 193 Pfam PF02545 Maf-like protein 5 186 3.4E-47 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 JV59_34525 b3b5ba4b22efc474cdf195825709143e 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 185 1.2E-55 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 JV59_34525 b3b5ba4b22efc474cdf195825709143e 193 SUPERFAMILY SSF52972 3 186 9.16E-59 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like JV59_34220 d888f8f4afd3826ffef28907b039efc8 349 PIRSF PIRSF000428 1 333 1.1E-102 T 14-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 JV59_34220 d888f8f4afd3826ffef28907b039efc8 349 Gene3D G3DSA:3.40.50.10750 142 302 9.0E-122 T 14-10-2018 JV59_34220 d888f8f4afd3826ffef28907b039efc8 349 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 18 326 3.2E-105 T 14-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 JV59_34220 d888f8f4afd3826ffef28907b039efc8 349 SUPERFAMILY SSF53659 1 330 2.59E-88 T 14-10-2018 JV59_34220 d888f8f4afd3826ffef28907b039efc8 349 Pfam PF01515 Phosphate acetyl/butaryl transferase 4 326 2.2E-113 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 JV59_34220 d888f8f4afd3826ffef28907b039efc8 349 Gene3D G3DSA:3.40.50.10950 9 329 9.0E-122 T 14-10-2018 JV59_26495 7b73527df6fbcfd8ba40fe91dd929390 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.5E-44 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26495 7b73527df6fbcfd8ba40fe91dd929390 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 3.3E-40 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26495 7b73527df6fbcfd8ba40fe91dd929390 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.466 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26495 7b73527df6fbcfd8ba40fe91dd929390 103 SUPERFAMILY SSF141091 1 102 1.44E-38 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26495 7b73527df6fbcfd8ba40fe91dd929390 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_28770 78541284040097acf9c6ba23eacbd475 761 Gene3D G3DSA:1.10.540.10 63 176 1.2E-88 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JV59_28770 78541284040097acf9c6ba23eacbd475 761 Gene3D G3DSA:1.20.140.10 301 446 1.2E-88 T 14-10-2018 JV59_28770 78541284040097acf9c6ba23eacbd475 761 SUPERFAMILY SSF56645 61 296 1.31E-46 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JV59_28770 78541284040097acf9c6ba23eacbd475 761 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 446 1.7E-8 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JV59_28770 78541284040097acf9c6ba23eacbd475 761 Pfam PF09317 Domain of unknown function (DUF1974) 455 739 5.4E-111 T 14-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 JV59_28770 78541284040097acf9c6ba23eacbd475 761 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 278 3.7E-10 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JV59_28770 78541284040097acf9c6ba23eacbd475 761 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 66 173 1.4E-14 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JV59_28770 78541284040097acf9c6ba23eacbd475 761 SUPERFAMILY SSF47203 301 453 8.86E-20 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JV59_28770 78541284040097acf9c6ba23eacbd475 761 Gene3D G3DSA:2.40.110.10 177 300 1.2E-88 T 14-10-2018 JV59_16640 39800d646327ba8e6ef611b8d651a78d 119 Gene3D G3DSA:3.40.30.10 20 118 3.6E-14 T 14-10-2018 JV59_16640 39800d646327ba8e6ef611b8d651a78d 119 SUPERFAMILY SSF52833 40 118 1.11E-18 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_16640 39800d646327ba8e6ef611b8d651a78d 119 Pfam PF13417 Glutathione S-transferase, N-terminal domain 43 118 9.5E-12 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 JV59_36445 1ebab9ad4242b16fafd518afdeb4437d 127 Pfam PF01592 NifU-like N terminal domain 2 126 3.0E-56 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 JV59_36445 1ebab9ad4242b16fafd518afdeb4437d 127 Gene3D G3DSA:3.90.1010.10 1 127 8.9E-59 T 14-10-2018 JV59_36445 1ebab9ad4242b16fafd518afdeb4437d 127 SUPERFAMILY SSF82649 1 125 1.88E-48 T 14-10-2018 JV59_36445 1ebab9ad4242b16fafd518afdeb4437d 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 3.8E-69 T 14-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 JV59_21985 a0855eae1ba711573b3734ce8476f90c 665 Gene3D G3DSA:1.10.3470.10 11 341 1.2E-80 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JV59_21985 a0855eae1ba711573b3734ce8476f90c 665 Gene3D G3DSA:1.10.3470.10 348 665 1.9E-73 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JV59_21985 a0855eae1ba711573b3734ce8476f90c 665 SUPERFAMILY SSF81345 13 336 1.2E-68 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JV59_21985 a0855eae1ba711573b3734ce8476f90c 665 SUPERFAMILY SSF81345 353 665 4.97E-66 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JV59_21985 a0855eae1ba711573b3734ce8476f90c 665 Pfam PF01032 FecCD transport family 366 665 8.8E-72 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 JV59_21985 a0855eae1ba711573b3734ce8476f90c 665 Pfam PF01032 FecCD transport family 26 336 5.4E-75 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 JV59_01875 e021ed97f389414823ca6b5f1eff7bcd 1516 Gene3D G3DSA:3.60.20.10 21 560 0.0 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JV59_01875 e021ed97f389414823ca6b5f1eff7bcd 1516 SUPERFAMILY SSF56235 21 447 9.12E-153 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JV59_01875 e021ed97f389414823ca6b5f1eff7bcd 1516 Gene3D G3DSA:2.160.20.60 1239 1510 2.7E-109 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 JV59_01875 e021ed97f389414823ca6b5f1eff7bcd 1516 Gene3D G3DSA:3.20.20.70 498 1204 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_01875 e021ed97f389414823ca6b5f1eff7bcd 1516 Pfam PF00310 Glutamine amidotransferases class-II 21 443 4.4E-185 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain JV59_01875 e021ed97f389414823ca6b5f1eff7bcd 1516 SUPERFAMILY SSF51395 452 1221 6.11E-268 T 14-10-2018 JV59_01875 e021ed97f389414823ca6b5f1eff7bcd 1516 Gene3D G3DSA:3.20.20.70 448 815 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_01875 e021ed97f389414823ca6b5f1eff7bcd 1516 Pfam PF04898 Glutamate synthase central domain 472 756 5.3E-117 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 JV59_01875 e021ed97f389414823ca6b5f1eff7bcd 1516 Pfam PF01493 GXGXG motif 1267 1452 1.2E-83 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 JV59_01875 e021ed97f389414823ca6b5f1eff7bcd 1516 SUPERFAMILY SSF69336 1235 1498 1.7E-95 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 JV59_01875 e021ed97f389414823ca6b5f1eff7bcd 1516 Pfam PF01645 Conserved region in glutamate synthase 817 1187 5.3E-151 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 JV59_36825 5cda7d9885640837e2a3bcbab47d27ee 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 JV59_36825 5cda7d9885640837e2a3bcbab47d27ee 476 SUPERFAMILY SSF52374 340 471 1.49E-23 T 14-10-2018 JV59_36825 5cda7d9885640837e2a3bcbab47d27ee 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 6.8E-61 T 14-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 JV59_36825 5cda7d9885640837e2a3bcbab47d27ee 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.72 T 14-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 JV59_36825 5cda7d9885640837e2a3bcbab47d27ee 476 Pfam PF00294 pfkB family carbohydrate kinase 13 302 4.2E-48 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB JV59_36825 5cda7d9885640837e2a3bcbab47d27ee 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 2.2E-126 T 14-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 JV59_36825 5cda7d9885640837e2a3bcbab47d27ee 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 6.1E-18 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JV59_36825 5cda7d9885640837e2a3bcbab47d27ee 476 Pfam PF01467 Cytidylyltransferase-like 345 469 3.8E-15 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JV59_36825 5cda7d9885640837e2a3bcbab47d27ee 476 SUPERFAMILY SSF53613 12 305 6.24E-58 T 14-10-2018 IPR029056 Ribokinase-like JV59_36825 5cda7d9885640837e2a3bcbab47d27ee 476 Gene3D G3DSA:3.40.1190.20 5 310 1.4E-111 T 14-10-2018 IPR029056 Ribokinase-like JV59_36825 5cda7d9885640837e2a3bcbab47d27ee 476 Gene3D G3DSA:3.40.50.620 321 473 5.9E-38 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_35880 ea2dbbde758fc43f40187aafde26395f 196 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 14-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 JV59_35880 ea2dbbde758fc43f40187aafde26395f 196 Pfam PF01184 GPR1/FUN34/yaaH family 3 177 4.8E-36 T 14-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 JV59_01470 0a3c1fd73487d4bcdbc355b83ecc08f5 255 SUPERFAMILY SSF48008 97 235 1.02E-19 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JV59_01470 0a3c1fd73487d4bcdbc355b83ecc08f5 255 Pfam PF07729 FCD domain 99 226 2.3E-17 T 14-10-2018 IPR011711 GntR, C-terminal JV59_01470 0a3c1fd73487d4bcdbc355b83ecc08f5 255 Gene3D G3DSA:1.10.10.10 1 74 2.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_01470 0a3c1fd73487d4bcdbc355b83ecc08f5 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_01470 0a3c1fd73487d4bcdbc355b83ecc08f5 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_01470 0a3c1fd73487d4bcdbc355b83ecc08f5 255 Gene3D G3DSA:1.20.120.530 97 236 8.4E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JV59_01470 0a3c1fd73487d4bcdbc355b83ecc08f5 255 SMART SM00895 99 227 2.2E-18 T 14-10-2018 IPR011711 GntR, C-terminal JV59_01470 0a3c1fd73487d4bcdbc355b83ecc08f5 255 SMART SM00345 15 74 1.8E-27 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_01470 0a3c1fd73487d4bcdbc355b83ecc08f5 255 SUPERFAMILY SSF46785 5 76 4.18E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_01470 0a3c1fd73487d4bcdbc355b83ecc08f5 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 3.9E-25 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_22230 4a0acf8c2016ec0065883221f2057785 562 Gene3D G3DSA:1.20.1560.10 8 312 1.2E-24 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_22230 4a0acf8c2016ec0065883221f2057785 562 Gene3D G3DSA:3.40.50.300 313 560 4.7E-81 T 14-10-2018 JV59_22230 4a0acf8c2016ec0065883221f2057785 562 SUPERFAMILY SSF52540 318 558 1.55E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_22230 4a0acf8c2016ec0065883221f2057785 562 SMART SM00382 349 535 4.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_22230 4a0acf8c2016ec0065883221f2057785 562 Pfam PF00005 ABC transporter 340 489 1.7E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_22230 4a0acf8c2016ec0065883221f2057785 562 ProSitePatterns PS00211 ABC transporters family signature. 461 475 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_22230 4a0acf8c2016ec0065883221f2057785 562 SUPERFAMILY SSF90123 26 311 1.83E-30 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_22230 4a0acf8c2016ec0065883221f2057785 562 Pfam PF00664 ABC transporter transmembrane region 38 282 7.5E-13 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JV59_27475 66e6f62b557c9a12deabae41da8ff1e2 314 Gene3D G3DSA:3.40.50.2020 148 290 7.6E-136 T 14-10-2018 JV59_27475 66e6f62b557c9a12deabae41da8ff1e2 314 Gene3D G3DSA:3.40.50.2020 7 302 7.6E-136 T 14-10-2018 JV59_27475 66e6f62b557c9a12deabae41da8ff1e2 314 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 49.669 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 JV59_27475 66e6f62b557c9a12deabae41da8ff1e2 314 SUPERFAMILY SSF53271 69 306 4.3E-67 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like JV59_27475 66e6f62b557c9a12deabae41da8ff1e2 314 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.3E-50 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 JV59_27475 66e6f62b557c9a12deabae41da8ff1e2 314 SMART SM01400 4 121 7.0E-78 T 14-10-2018 JV59_27475 66e6f62b557c9a12deabae41da8ff1e2 314 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 2.4E-32 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 JV59_27475 66e6f62b557c9a12deabae41da8ff1e2 314 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 JV59_27475 66e6f62b557c9a12deabae41da8ff1e2 314 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 1.2E-125 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 JV59_18685 244cea49f80594fd3fb1b6bf4cf6c6d3 150 SUPERFAMILY SSF103247 24 143 2.09E-34 T 14-10-2018 IPR035923 TT1751-like domain superfamily JV59_18685 244cea49f80594fd3fb1b6bf4cf6c6d3 150 Gene3D G3DSA:3.30.310.70 24 145 7.5E-15 T 14-10-2018 IPR035923 TT1751-like domain superfamily JV59_18685 244cea49f80594fd3fb1b6bf4cf6c6d3 150 Pfam PF03625 Domain of unknown function DUF302 55 117 2.4E-19 T 14-10-2018 IPR005180 Domain of unknown function DUF302 JV59_01110 f8bad73b9aa891e7b813c94bfee84f1c 470 Gene3D G3DSA:3.40.1380.20 336 467 6.8E-41 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_01110 f8bad73b9aa891e7b813c94bfee84f1c 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.1E-27 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_01110 f8bad73b9aa891e7b813c94bfee84f1c 470 SUPERFAMILY SSF52935 323 469 1.01E-33 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_01110 f8bad73b9aa891e7b813c94bfee84f1c 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_01110 f8bad73b9aa891e7b813c94bfee84f1c 470 Gene3D G3DSA:2.40.33.10 71 167 7.1E-148 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_01110 f8bad73b9aa891e7b813c94bfee84f1c 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 3.5E-187 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_01110 f8bad73b9aa891e7b813c94bfee84f1c 470 SUPERFAMILY SSF51621 1 339 1.64E-102 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JV59_01110 f8bad73b9aa891e7b813c94bfee84f1c 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 1.5E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_01110 f8bad73b9aa891e7b813c94bfee84f1c 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 1.5E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_01110 f8bad73b9aa891e7b813c94bfee84f1c 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.5E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_01110 f8bad73b9aa891e7b813c94bfee84f1c 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 1.5E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_01110 f8bad73b9aa891e7b813c94bfee84f1c 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 1.5E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_01110 f8bad73b9aa891e7b813c94bfee84f1c 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 1.5E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_01110 f8bad73b9aa891e7b813c94bfee84f1c 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 1.5E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_01110 f8bad73b9aa891e7b813c94bfee84f1c 470 Gene3D G3DSA:3.20.20.60 4 332 7.1E-148 T 14-10-2018 JV59_01110 f8bad73b9aa891e7b813c94bfee84f1c 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 4.2E-155 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JV59_01110 f8bad73b9aa891e7b813c94bfee84f1c 470 SUPERFAMILY SSF50800 70 167 7.33E-29 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily JV59_23565 9fac62758bee54324b3c0eb47089770a 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 161 5.2E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JV59_23565 9fac62758bee54324b3c0eb47089770a 190 Gene3D G3DSA:1.10.10.10 106 165 1.1E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_23565 9fac62758bee54324b3c0eb47089770a 190 SUPERFAMILY SSF88659 103 164 2.06E-9 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JV59_23565 9fac62758bee54324b3c0eb47089770a 190 SUPERFAMILY SSF88946 10 95 1.26E-17 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JV59_23565 9fac62758bee54324b3c0eb47089770a 190 Gene3D G3DSA:1.10.1740.10 7 105 4.1E-15 T 14-10-2018 JV59_23565 9fac62758bee54324b3c0eb47089770a 190 Pfam PF04542 Sigma-70 region 2 15 80 8.7E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JV59_23565 9fac62758bee54324b3c0eb47089770a 190 TIGRFAM TIGR02959 SigZ: RNA polymerase sigma factor, SigZ family 14 184 2.2E-59 T 14-10-2018 IPR014304 RNA polymerase sigma-Z type JV59_23565 9fac62758bee54324b3c0eb47089770a 190 Pfam PF08281 Sigma-70, region 4 113 159 2.2E-8 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JV59_00170 1c9016c6a681867f384ac39d0c056d8f 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 4.1E-77 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 JV59_00170 1c9016c6a681867f384ac39d0c056d8f 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 3.6E-25 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 JV59_00170 1c9016c6a681867f384ac39d0c056d8f 188 SUPERFAMILY SSF50104 2 64 7.02E-21 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily JV59_00170 1c9016c6a681867f384ac39d0c056d8f 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site JV59_00170 1c9016c6a681867f384ac39d0c056d8f 188 SUPERFAMILY SSF50249 130 187 4.63E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_00170 1c9016c6a681867f384ac39d0c056d8f 188 Gene3D G3DSA:2.30.30.30 1 64 4.5E-27 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 JV59_00170 1c9016c6a681867f384ac39d0c056d8f 188 SMART SM01185 69 123 2.1E-25 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 JV59_00170 1c9016c6a681867f384ac39d0c056d8f 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 3.1E-25 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like JV59_00170 1c9016c6a681867f384ac39d0c056d8f 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 5.9E-22 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 JV59_00170 1c9016c6a681867f384ac39d0c056d8f 188 Gene3D G3DSA:2.40.50.140 66 127 5.3E-28 T 14-10-2018 JV59_00170 1c9016c6a681867f384ac39d0c056d8f 188 SMART SM00841 131 186 4.5E-31 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 JV59_00170 1c9016c6a681867f384ac39d0c056d8f 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.56 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 JV59_00170 1c9016c6a681867f384ac39d0c056d8f 188 SUPERFAMILY SSF50249 70 128 1.46E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_00170 1c9016c6a681867f384ac39d0c056d8f 188 PIRSF PIRSF005901 2 188 1.8E-63 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP JV59_00170 1c9016c6a681867f384ac39d0c056d8f 188 Gene3D G3DSA:2.40.50.140 130 188 4.2E-27 T 14-10-2018 JV59_25725 36564ad6e628badeeadb1f7244f12aec 383 SUPERFAMILY SSF109604 137 364 4.81E-32 T 14-10-2018 JV59_25725 36564ad6e628badeeadb1f7244f12aec 383 SMART SM00448 6 120 8.0E-5 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_25725 36564ad6e628badeeadb1f7244f12aec 383 PIRSF PIRSF036883 1 369 4.6E-90 T 14-10-2018 IPR014626 Signal transduction response regulator with modified HD-GYP domain, putative JV59_25725 36564ad6e628badeeadb1f7244f12aec 383 Pfam PF08668 HDOD domain 145 282 5.1E-27 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD JV59_25725 36564ad6e628badeeadb1f7244f12aec 383 SUPERFAMILY SSF52172 5 132 2.28E-16 T 14-10-2018 IPR011006 CheY-like superfamily JV59_25725 36564ad6e628badeeadb1f7244f12aec 383 Gene3D G3DSA:1.10.3210.10 132 371 2.4E-38 T 14-10-2018 JV59_25725 36564ad6e628badeeadb1f7244f12aec 383 Gene3D G3DSA:3.40.50.2300 1 131 9.4E-15 T 14-10-2018 JV59_25725 36564ad6e628badeeadb1f7244f12aec 383 Pfam PF00072 Response regulator receiver domain 8 119 9.4E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_35595 9d2416ca254b82ab56441be3f8bda396 404 Gene3D G3DSA:3.30.420.40 90 384 4.2E-91 T 14-10-2018 JV59_35595 9d2416ca254b82ab56441be3f8bda396 404 SUPERFAMILY SSF46785 11 75 6.3E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_35595 9d2416ca254b82ab56441be3f8bda396 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 JV59_35595 9d2416ca254b82ab56441be3f8bda396 404 Gene3D G3DSA:1.10.10.10 3 79 3.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_35595 9d2416ca254b82ab56441be3f8bda396 404 Pfam PF00480 ROK family 86 390 8.1E-76 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 JV59_35595 9d2416ca254b82ab56441be3f8bda396 404 SUPERFAMILY SSF53067 85 392 1.67E-53 T 14-10-2018 JV59_35595 9d2416ca254b82ab56441be3f8bda396 404 Gene3D G3DSA:3.30.420.40 207 376 4.2E-91 T 14-10-2018 JV59_36980 67fcab4c890df8417a70d6628b4ebace 538 Gene3D G3DSA:1.20.58.100 425 537 6.3E-44 T 14-10-2018 JV59_36980 67fcab4c890df8417a70d6628b4ebace 538 SUPERFAMILY SSF56425 238 353 2.24E-42 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_36980 67fcab4c890df8417a70d6628b4ebace 538 SUPERFAMILY SSF51905 5 447 5.19E-75 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_36980 67fcab4c890df8417a70d6628b4ebace 538 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 3.2E-7 T 14-10-2018 JV59_36980 67fcab4c890df8417a70d6628b4ebace 538 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 3.2E-7 T 14-10-2018 JV59_36980 67fcab4c890df8417a70d6628b4ebace 538 Gene3D G3DSA:3.50.50.60 10 404 9.2E-155 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_36980 67fcab4c890df8417a70d6628b4ebace 538 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 520 1.0E-211 T 14-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 JV59_36980 67fcab4c890df8417a70d6628b4ebace 538 Gene3D G3DSA:3.90.700.10 248 358 9.2E-155 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_36980 67fcab4c890df8417a70d6628b4ebace 538 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 1.0E-8 T 14-10-2018 JV59_36980 67fcab4c890df8417a70d6628b4ebace 538 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.0E-8 T 14-10-2018 JV59_36980 67fcab4c890df8417a70d6628b4ebace 538 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 521 2.6E-14 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_36980 67fcab4c890df8417a70d6628b4ebace 538 Pfam PF00890 FAD binding domain 10 392 1.1E-103 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_36980 67fcab4c890df8417a70d6628b4ebace 538 SUPERFAMILY SSF46977 426 525 9.42E-32 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_36980 67fcab4c890df8417a70d6628b4ebace 538 PIRSF PIRSF000171 1 271 5.6E-23 T 14-10-2018 JV59_36980 67fcab4c890df8417a70d6628b4ebace 538 PIRSF PIRSF000171 335 531 1.4E-11 T 14-10-2018 JV59_24300 16764e8568f8f8673b865df65e78a65b 77 SMART SM00966 7 48 0.0014 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 JV59_24300 16764e8568f8f8673b865df65e78a65b 77 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 54 2.4E-9 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 JV59_24300 16764e8568f8f8673b865df65e78a65b 77 SUPERFAMILY SSF89447 3 66 1.62E-8 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily JV59_24300 16764e8568f8f8673b865df65e78a65b 77 Gene3D G3DSA:2.10.260.10 1 77 1.6E-15 T 14-10-2018 JV59_17140 27daab7bad6b703fbc79a825e1bb6b12 509 SUPERFAMILY SSF47413 12 86 2.17E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_17140 27daab7bad6b703fbc79a825e1bb6b12 509 Pfam PF01381 Helix-turn-helix 18 79 2.2E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_17140 27daab7bad6b703fbc79a825e1bb6b12 509 Pfam PF12268 Protein of unknown function (DUF3612) 327 501 2.0E-103 T 14-10-2018 IPR022055 Protein of unknown function DUF3612 JV59_17140 27daab7bad6b703fbc79a825e1bb6b12 509 Gene3D G3DSA:1.10.260.40 11 94 3.8E-14 T 14-10-2018 JV59_17140 27daab7bad6b703fbc79a825e1bb6b12 509 SMART SM00530 17 79 3.4E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 273 786 1.4E-125 T 14-10-2018 JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 Gene3D G3DSA:2.70.150.20 292 407 1.0E-31 T 14-10-2018 JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 228 784 1.4E-159 T 14-10-2018 JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 SUPERFAMILY SSF81665 284 765 2.09E-11 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 762 6.7E-77 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 ProSitePatterns PS01229 Hypothetical cof family signature 2. 682 704 - T 14-10-2018 JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 Pfam PF00122 E1-E2 ATPase 318 478 3.9E-47 T 14-10-2018 JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 86 1.3E-26 T 14-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 608 619 4.4E-27 T 14-10-2018 JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 682 701 4.4E-27 T 14-10-2018 JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 4.4E-27 T 14-10-2018 JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 630 640 4.4E-27 T 14-10-2018 JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 705 717 4.4E-27 T 14-10-2018 JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 4.4E-27 T 14-10-2018 JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 Gene3D G3DSA:3.30.70.100 88 173 9.4E-14 T 14-10-2018 JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 695 2.2E-31 T 14-10-2018 JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 Gene3D G3DSA:3.40.50.1000 482 721 4.0E-68 T 14-10-2018 IPR023214 HAD superfamily JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 Pfam PF00403 Heavy-metal-associated domain 93 154 3.6E-10 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 SUPERFAMILY SSF56784 500 782 1.26E-47 T 14-10-2018 IPR036412 HAD-like superfamily JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 784 7.4E-168 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 Gene3D G3DSA:3.40.1110.10 511 615 4.0E-68 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 SUPERFAMILY SSF81653 319 402 1.09E-23 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 SUPERFAMILY SSF55008 87 162 6.28E-17 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 PRINTS PR00943 Copper-transporting ATPase signature 660 677 2.1E-6 T 14-10-2018 JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 PRINTS PR00943 Copper-transporting ATPase signature 296 314 2.1E-6 T 14-10-2018 JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 PRINTS PR00943 Copper-transporting ATPase signature 135 155 2.1E-6 T 14-10-2018 JV59_31105 222f9534cad0cef90e9b77461b474bf4 790 PRINTS PR00943 Copper-transporting ATPase signature 230 249 2.1E-6 T 14-10-2018 JV59_34915 d72ddb19367babde46d3262e4399ac0b 652 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 3.6E-255 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_34915 d72ddb19367babde46d3262e4399ac0b 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 8.4E-61 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_34915 d72ddb19367babde46d3262e4399ac0b 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 8.4E-61 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_34915 d72ddb19367babde46d3262e4399ac0b 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 8.4E-61 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_34915 d72ddb19367babde46d3262e4399ac0b 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 8.4E-61 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_34915 d72ddb19367babde46d3262e4399ac0b 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 8.4E-61 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_34915 d72ddb19367babde46d3262e4399ac0b 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 8.4E-61 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_34915 d72ddb19367babde46d3262e4399ac0b 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 8.4E-61 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_34915 d72ddb19367babde46d3262e4399ac0b 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 6.2E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_34915 d72ddb19367babde46d3262e4399ac0b 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 6.2E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_34915 d72ddb19367babde46d3262e4399ac0b 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 6.2E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_34915 d72ddb19367babde46d3262e4399ac0b 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 6.2E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_34915 d72ddb19367babde46d3262e4399ac0b 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 6.2E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_34915 d72ddb19367babde46d3262e4399ac0b 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 6.2E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_34915 d72ddb19367babde46d3262e4399ac0b 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 6.2E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_34915 d72ddb19367babde46d3262e4399ac0b 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 6.2E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_34915 d72ddb19367babde46d3262e4399ac0b 652 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 3.6E-125 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal JV59_34915 d72ddb19367babde46d3262e4399ac0b 652 Pfam PF01578 Cytochrome C assembly protein 89 297 1.8E-54 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 JV59_21125 8799915dc9d5daf6e607c90d5ebb1079 207 SMART SM00530 31 86 1.6E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_21125 8799915dc9d5daf6e607c90d5ebb1079 207 Gene3D G3DSA:2.60.120.10 94 205 2.7E-25 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_21125 8799915dc9d5daf6e607c90d5ebb1079 207 SUPERFAMILY SSF51182 97 204 4.7E-24 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JV59_21125 8799915dc9d5daf6e607c90d5ebb1079 207 Pfam PF01381 Helix-turn-helix 32 84 3.4E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_21125 8799915dc9d5daf6e607c90d5ebb1079 207 SUPERFAMILY SSF47413 26 90 2.2E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_21125 8799915dc9d5daf6e607c90d5ebb1079 207 Gene3D G3DSA:1.10.260.40 26 93 5.3E-15 T 14-10-2018 JV59_21125 8799915dc9d5daf6e607c90d5ebb1079 207 Pfam PF07883 Cupin domain 147 204 3.3E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel JV59_35375 77f1c073ff2633f1206aa59351fbb093 281 Pfam PF14489 QueF-like protein 194 270 5.8E-28 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 JV59_35375 77f1c073ff2633f1206aa59351fbb093 281 Gene3D G3DSA:3.30.1130.10 143 281 1.3E-64 T 14-10-2018 JV59_35375 77f1c073ff2633f1206aa59351fbb093 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 130 1.3E-49 T 14-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 JV59_35375 77f1c073ff2633f1206aa59351fbb093 281 Gene3D G3DSA:3.30.1130.10 21 138 9.6E-47 T 14-10-2018 JV59_35375 77f1c073ff2633f1206aa59351fbb093 281 SUPERFAMILY SSF55620 184 267 2.3E-9 T 14-10-2018 JV59_35375 77f1c073ff2633f1206aa59351fbb093 281 PIRSF PIRSF004750 6 281 7.3E-131 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 JV59_35375 77f1c073ff2633f1206aa59351fbb093 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 7.9E-131 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 JV59_35375 77f1c073ff2633f1206aa59351fbb093 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 162.88 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 JV59_37940 26d07c193f7ceeca17a878d4f575bffa 438 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 JV59_37940 26d07c193f7ceeca17a878d4f575bffa 438 SMART SM00788 4 431 5.7E-302 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 JV59_37940 26d07c193f7ceeca17a878d4f575bffa 438 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 431 1.7E-191 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 JV59_37940 26d07c193f7ceeca17a878d4f575bffa 438 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 JV59_37940 26d07c193f7ceeca17a878d4f575bffa 438 Gene3D G3DSA:3.40.440.10 6 249 3.8E-106 T 14-10-2018 JV59_37940 26d07c193f7ceeca17a878d4f575bffa 438 Gene3D G3DSA:3.90.170.10 267 438 3.6E-67 T 14-10-2018 JV59_37940 26d07c193f7ceeca17a878d4f575bffa 438 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 438 217.653 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 JV59_37940 26d07c193f7ceeca17a878d4f575bffa 438 SUPERFAMILY SSF52540 3 436 1.81E-178 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_37940 26d07c193f7ceeca17a878d4f575bffa 438 Gene3D G3DSA:1.10.300.10 102 201 3.8E-106 T 14-10-2018 JV59_37940 26d07c193f7ceeca17a878d4f575bffa 438 Pfam PF00709 Adenylosuccinate synthetase 5 430 5.3E-179 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 JV59_28555 4b671c20f427d589db5998680f572b58 221 SUPERFAMILY SSF51735 2 208 1.53E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_28555 4b671c20f427d589db5998680f572b58 221 Pfam PF00106 short chain dehydrogenase 2 183 1.2E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_28555 4b671c20f427d589db5998680f572b58 221 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 170 0.0041 T 14-10-2018 JV59_28555 4b671c20f427d589db5998680f572b58 221 Gene3D G3DSA:3.40.50.720 1 221 4.3E-52 T 14-10-2018 JV59_28555 4b671c20f427d589db5998680f572b58 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 18 8.8E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_28555 4b671c20f427d589db5998680f572b58 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 8.8E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_28555 4b671c20f427d589db5998680f572b58 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 8.8E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_28555 4b671c20f427d589db5998680f572b58 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 8.8E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_35725 f15f83ea3abd72dc9e0d4d4319f890c0 637 SUPERFAMILY SSF53067 186 381 4.28E-65 T 14-10-2018 JV59_35725 f15f83ea3abd72dc9e0d4d4319f890c0 637 Gene3D G3DSA:3.30.420.40 179 365 6.0E-165 T 14-10-2018 JV59_35725 f15f83ea3abd72dc9e0d4d4319f890c0 637 PRINTS PR00301 70kDa heat shock protein signature 53 61 2.1E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_35725 f15f83ea3abd72dc9e0d4d4319f890c0 637 PRINTS PR00301 70kDa heat shock protein signature 197 207 2.1E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_35725 f15f83ea3abd72dc9e0d4d4319f890c0 637 PRINTS PR00301 70kDa heat shock protein signature 387 406 2.1E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_35725 f15f83ea3abd72dc9e0d4d4319f890c0 637 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.1E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_35725 f15f83ea3abd72dc9e0d4d4319f890c0 637 PRINTS PR00301 70kDa heat shock protein signature 137 157 2.1E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_35725 f15f83ea3abd72dc9e0d4d4319f890c0 637 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.1E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_35725 f15f83ea3abd72dc9e0d4d4319f890c0 637 PRINTS PR00301 70kDa heat shock protein signature 333 349 2.1E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_35725 f15f83ea3abd72dc9e0d4d4319f890c0 637 PRINTS PR00301 70kDa heat shock protein signature 364 384 2.1E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_35725 f15f83ea3abd72dc9e0d4d4319f890c0 637 PRINTS PR00301 70kDa heat shock protein signature 468 484 2.1E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_35725 f15f83ea3abd72dc9e0d4d4319f890c0 637 SUPERFAMILY SSF100920 383 539 4.71E-60 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 JV59_35725 f15f83ea3abd72dc9e0d4d4319f890c0 637 SUPERFAMILY SSF53067 1 182 3.35E-64 T 14-10-2018 JV59_35725 f15f83ea3abd72dc9e0d4d4319f890c0 637 Gene3D G3DSA:3.30.420.40 5 378 6.0E-165 T 14-10-2018 JV59_35725 f15f83ea3abd72dc9e0d4d4319f890c0 637 SUPERFAMILY SSF100934 534 607 2.16E-6 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 JV59_35725 f15f83ea3abd72dc9e0d4d4319f890c0 637 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 JV59_35725 f15f83ea3abd72dc9e0d4d4319f890c0 637 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 JV59_35725 f15f83ea3abd72dc9e0d4d4319f890c0 637 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 JV59_35725 f15f83ea3abd72dc9e0d4d4319f890c0 637 Pfam PF00012 Hsp70 protein 4 601 3.0E-260 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_35725 f15f83ea3abd72dc9e0d4d4319f890c0 637 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 632 35.947 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 JV59_35725 f15f83ea3abd72dc9e0d4d4319f890c0 637 Gene3D G3DSA:2.60.34.10 382 522 7.5E-65 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 JV59_35725 f15f83ea3abd72dc9e0d4d4319f890c0 637 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 7.8E-283 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 JV59_35725 f15f83ea3abd72dc9e0d4d4319f890c0 637 Gene3D G3DSA:3.90.640.10 228 315 6.0E-165 T 14-10-2018 JV59_35725 f15f83ea3abd72dc9e0d4d4319f890c0 637 Gene3D G3DSA:1.20.1270.10 523 602 9.1E-26 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 JV59_39245 b34b2551bd501735455dd1f4e67b8e7e 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 243 5.2E-57 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_39245 b34b2551bd501735455dd1f4e67b8e7e 248 SMART SM00062 24 245 2.0E-77 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_39245 b34b2551bd501735455dd1f4e67b8e7e 248 SUPERFAMILY SSF53850 1 246 1.76E-59 T 14-10-2018 JV59_39245 b34b2551bd501735455dd1f4e67b8e7e 248 SMART SM00079 24 244 0.0052 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 JV59_39245 b34b2551bd501735455dd1f4e67b8e7e 248 Gene3D G3DSA:3.40.190.10 95 203 2.0E-28 T 14-10-2018 JV59_39245 b34b2551bd501735455dd1f4e67b8e7e 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site JV59_37740 48a93b8af7da1d30145cd6656407e4eb 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 9.2E-164 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 JV59_37740 48a93b8af7da1d30145cd6656407e4eb 302 PIRSF PIRSF002936 1 302 8.2E-157 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 JV59_37740 48a93b8af7da1d30145cd6656407e4eb 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 3.3E-64 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 JV59_37740 48a93b8af7da1d30145cd6656407e4eb 302 Gene3D G3DSA:3.40.50.620 7 212 1.5E-65 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_37740 48a93b8af7da1d30145cd6656407e4eb 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 57.957 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 JV59_37740 48a93b8af7da1d30145cd6656407e4eb 302 SUPERFAMILY SSF52402 6 209 4.19E-74 T 14-10-2018 JV59_30760 84a04eaf8d646f30d5a6184d786ee4e1 288 Gene3D G3DSA:3.30.200.20 1 93 1.6E-20 T 14-10-2018 JV59_30760 84a04eaf8d646f30d5a6184d786ee4e1 288 SUPERFAMILY SSF56112 7 282 4.42E-39 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily JV59_30760 84a04eaf8d646f30d5a6184d786ee4e1 288 Gene3D G3DSA:3.90.1200.10 97 288 7.9E-62 T 14-10-2018 JV59_30760 84a04eaf8d646f30d5a6184d786ee4e1 288 PIRSF PIRSF006221 1 288 5.8E-101 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 JV59_30760 84a04eaf8d646f30d5a6184d786ee4e1 288 Pfam PF03881 Fructosamine kinase 1 287 1.9E-119 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 JV59_35635 106963a574041dd16017478c1973e323 193 SMART SM00463 92 175 1.6E-15 T 14-10-2018 IPR002625 Smr domain JV59_35635 106963a574041dd16017478c1973e323 193 Pfam PF01713 Smr domain 95 175 4.1E-21 T 14-10-2018 IPR002625 Smr domain JV59_35635 106963a574041dd16017478c1973e323 193 Gene3D G3DSA:3.30.1370.110 48 181 2.5E-43 T 14-10-2018 JV59_35635 106963a574041dd16017478c1973e323 193 SUPERFAMILY SSF160443 93 175 1.07E-14 T 14-10-2018 IPR036063 Smr domain superfamily JV59_30375 598dacf8b4c4db5f06fca9295ebc73d4 698 Gene3D G3DSA:2.40.170.20 164 698 2.3E-100 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily JV59_30375 598dacf8b4c4db5f06fca9295ebc73d4 698 Pfam PF00593 TonB dependent receptor 233 697 3.8E-52 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel JV59_30375 598dacf8b4c4db5f06fca9295ebc73d4 698 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 58 697 8.0E-91 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 JV59_30375 598dacf8b4c4db5f06fca9295ebc73d4 698 SUPERFAMILY SSF56935 21 698 1.83E-117 T 14-10-2018 JV59_30375 598dacf8b4c4db5f06fca9295ebc73d4 698 Gene3D G3DSA:2.170.130.10 37 163 9.9E-31 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily JV59_30375 598dacf8b4c4db5f06fca9295ebc73d4 698 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 152 1.4E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain JV59_34615 cbaddf377328814d62c5bd2598a96e16 448 SMART SM00382 50 166 4.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_34615 cbaddf377328814d62c5bd2598a96e16 448 Gene3D G3DSA:1.10.3710.10 347 448 2.8E-37 T 14-10-2018 JV59_34615 cbaddf377328814d62c5bd2598a96e16 448 SUPERFAMILY SSF48019 253 435 9.64E-73 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 JV59_34615 cbaddf377328814d62c5bd2598a96e16 448 SUPERFAMILY SSF52540 11 241 1.05E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_34615 cbaddf377328814d62c5bd2598a96e16 448 Gene3D G3DSA:1.20.272.10 242 346 1.2E-43 T 14-10-2018 JV59_34615 cbaddf377328814d62c5bd2598a96e16 448 Pfam PF16193 AAA C-terminal domain 191 268 7.2E-21 T 14-10-2018 IPR032423 AAA C-terminal domain JV59_34615 cbaddf377328814d62c5bd2598a96e16 448 Pfam PF12002 MgsA AAA+ ATPase C terminal 269 435 1.2E-67 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal JV59_34615 cbaddf377328814d62c5bd2598a96e16 448 Gene3D G3DSA:3.40.50.300 2 165 1.4E-48 T 14-10-2018 JV59_34615 cbaddf377328814d62c5bd2598a96e16 448 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 159 7.6E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JV59_34615 cbaddf377328814d62c5bd2598a96e16 448 Gene3D G3DSA:1.10.8.60 166 241 7.1E-24 T 14-10-2018 JV59_27375 15f9df0415841cc042be70538687efb5 434 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 416 4.7E-91 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G JV59_27375 15f9df0415841cc042be70538687efb5 434 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site JV59_27375 15f9df0415841cc042be70538687efb5 434 Gene3D G3DSA:2.60.98.20 154 315 4.8E-22 T 14-10-2018 IPR037058 Flagellar hook protein FlgE superfamily JV59_27375 15f9df0415841cc042be70538687efb5 434 SUPERFAMILY SSF117143 78 394 1.96E-66 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like JV59_27375 15f9df0415841cc042be70538687efb5 434 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 355 433 9.1E-14 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JV59_27375 15f9df0415841cc042be70538687efb5 434 Pfam PF07559 Flagellar basal body protein FlaE 181 314 2.8E-21 T 14-10-2018 IPR011491 Flagellar hook protein FlgE JV59_27375 15f9df0415841cc042be70538687efb5 434 Pfam PF00460 Flagella basal body rod protein 3 32 2.5E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 JV59_19605 1b5df93c02e557238e7dbc7a8c6ee759 402 Pfam PF00108 Thiolase, N-terminal domain 4 263 2.9E-97 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 JV59_19605 1b5df93c02e557238e7dbc7a8c6ee759 402 SUPERFAMILY SSF53901 271 399 6.2E-38 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_19605 1b5df93c02e557238e7dbc7a8c6ee759 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 JV59_19605 1b5df93c02e557238e7dbc7a8c6ee759 402 PIRSF PIRSF000429 1 402 1.7E-125 T 14-10-2018 IPR002155 Thiolase GO:0016747 JV59_19605 1b5df93c02e557238e7dbc7a8c6ee759 402 Gene3D G3DSA:3.40.47.10 126 398 2.8E-148 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_19605 1b5df93c02e557238e7dbc7a8c6ee759 402 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 JV59_19605 1b5df93c02e557238e7dbc7a8c6ee759 402 Pfam PF02803 Thiolase, C-terminal domain 271 399 1.8E-43 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 JV59_19605 1b5df93c02e557238e7dbc7a8c6ee759 402 Gene3D G3DSA:3.40.47.10 6 276 2.8E-148 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_19605 1b5df93c02e557238e7dbc7a8c6ee759 402 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 JV59_19605 1b5df93c02e557238e7dbc7a8c6ee759 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 2.5E-144 T 14-10-2018 IPR002155 Thiolase GO:0016747 JV59_19605 1b5df93c02e557238e7dbc7a8c6ee759 402 SUPERFAMILY SSF53901 4 270 3.26E-83 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_37755 5fbfab4185718d78d747251bdbe756a0 189 Gene3D G3DSA:2.60.120.10 6 142 6.2E-22 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_37755 5fbfab4185718d78d747251bdbe756a0 189 Pfam PF00027 Cyclic nucleotide-binding domain 32 115 2.3E-9 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JV59_37755 5fbfab4185718d78d747251bdbe756a0 189 SUPERFAMILY SSF51206 17 141 3.8E-21 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JV59_33245 72dbbffdcbe05ee1d25f401412c482a9 475 Gene3D G3DSA:3.20.20.70 277 469 3.1E-172 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_33245 72dbbffdcbe05ee1d25f401412c482a9 475 Gene3D G3DSA:3.20.20.70 26 276 3.1E-172 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_33245 72dbbffdcbe05ee1d25f401412c482a9 475 SUPERFAMILY SSF51366 19 272 6.31E-81 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 JV59_33245 72dbbffdcbe05ee1d25f401412c482a9 475 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 278 470 3.0E-53 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 JV59_33245 72dbbffdcbe05ee1d25f401412c482a9 475 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 68 86 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 JV59_33245 72dbbffdcbe05ee1d25f401412c482a9 475 Pfam PF00218 Indole-3-glycerol phosphate synthase 23 272 6.5E-95 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 JV59_33245 72dbbffdcbe05ee1d25f401412c482a9 475 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 276 475 30.123 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 JV59_33245 72dbbffdcbe05ee1d25f401412c482a9 475 SUPERFAMILY SSF51366 278 473 3.77E-53 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 JV59_33245 72dbbffdcbe05ee1d25f401412c482a9 475 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 21 275 35.243 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 JV59_20515 711e3a551bda6166bb66623773d7cdd8 268 Gene3D G3DSA:3.40.50.300 20 265 1.7E-67 T 14-10-2018 JV59_20515 711e3a551bda6166bb66623773d7cdd8 268 Pfam PF00005 ABC transporter 38 193 5.5E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_20515 711e3a551bda6166bb66623773d7cdd8 268 SUPERFAMILY SSF52540 21 262 1.54E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_20515 711e3a551bda6166bb66623773d7cdd8 268 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_20515 711e3a551bda6166bb66623773d7cdd8 268 SMART SM00382 47 257 9.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_20515 711e3a551bda6166bb66623773d7cdd8 268 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 21 268 3.8E-113 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 JV59_39460 06a2fc1c990ec7206e6f8c86e4420c53 646 Pfam PF13667 ThiC-associated domain 22 104 1.7E-34 T 14-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 JV59_39460 06a2fc1c990ec7206e6f8c86e4420c53 646 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 596 99.029 T 14-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 JV59_39460 06a2fc1c990ec7206e6f8c86e4420c53 646 Pfam PF01964 Radical SAM ThiC family 144 592 3.2E-198 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 JV59_39460 06a2fc1c990ec7206e6f8c86e4420c53 646 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 594 6.8E-219 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 JV59_39460 06a2fc1c990ec7206e6f8c86e4420c53 646 Gene3D G3DSA:3.20.20.540 214 527 9.3E-154 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 JV59_38920 0e00766271c16db0267331cf4613ec04 291 Gene3D G3DSA:3.90.1280.10 225 284 2.8E-20 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 JV59_38920 0e00766271c16db0267331cf4613ec04 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 283 31.782 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 JV59_38920 0e00766271c16db0267331cf4613ec04 291 PIRSF PIRSF005261 1 284 2.9E-72 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 JV59_38920 0e00766271c16db0267331cf4613ec04 291 SUPERFAMILY SSF118352 223 282 5.49E-18 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 JV59_38920 0e00766271c16db0267331cf4613ec04 291 SUPERFAMILY SSF64397 4 231 8.24E-77 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 JV59_38920 0e00766271c16db0267331cf4613ec04 291 Gene3D G3DSA:3.55.30.10 1 175 9.9E-64 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 JV59_38920 0e00766271c16db0267331cf4613ec04 291 Gene3D G3DSA:1.10.287.480 178 224 4.8E-23 T 14-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily JV59_38920 0e00766271c16db0267331cf4613ec04 291 Pfam PF01430 Hsp33 protein 6 272 3.1E-81 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 JV59_32920 92dc206e5d8b4409c82ba5a653d0ca94 363 Gene3D G3DSA:3.40.190.10 156 327 6.0E-119 T 14-10-2018 JV59_32920 92dc206e5d8b4409c82ba5a653d0ca94 363 PIRSF PIRSF039026 3 362 2.4E-142 T 14-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like JV59_32920 92dc206e5d8b4409c82ba5a653d0ca94 363 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 327 9.9E-71 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 JV59_32920 92dc206e5d8b4409c82ba5a653d0ca94 363 Gene3D G3DSA:3.40.190.170 38 348 6.0E-119 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily JV59_20885 5c7566a7f7341983428d7f7fbf10f07d 136 SUPERFAMILY SSF52218 1 130 3.4E-24 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_20885 5c7566a7f7341983428d7f7fbf10f07d 136 Hamap MF_00128 Protein NrdI [nrdI]. 1 131 33.01 T 14-10-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial JV59_20885 5c7566a7f7341983428d7f7fbf10f07d 136 TIGRFAM TIGR00333 nrdI: nrdI protein 3 129 1.1E-47 T 14-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI JV59_20885 5c7566a7f7341983428d7f7fbf10f07d 136 PIRSF PIRSF005087 1 134 1.1E-49 T 14-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI JV59_20885 5c7566a7f7341983428d7f7fbf10f07d 136 Gene3D G3DSA:3.40.50.360 1 132 6.0E-45 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_20885 5c7566a7f7341983428d7f7fbf10f07d 136 Pfam PF07972 NrdI Flavodoxin like 3 122 8.2E-44 T 14-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI JV59_28475 ea9517a027df2b662a006a7d57ea49ce 230 Gene3D G3DSA:3.30.70.580 43 118 8.3E-27 T 14-10-2018 JV59_28475 ea9517a027df2b662a006a7d57ea49ce 230 SUPERFAMILY SSF55120 44 228 1.76E-45 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_28475 ea9517a027df2b662a006a7d57ea49ce 230 Gene3D G3DSA:3.30.70.1560 119 218 6.0E-40 T 14-10-2018 JV59_28475 ea9517a027df2b662a006a7d57ea49ce 230 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 90 104 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 JV59_28475 ea9517a027df2b662a006a7d57ea49ce 230 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 59 228 1.0E-56 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 JV59_28475 ea9517a027df2b662a006a7d57ea49ce 230 Pfam PF00849 RNA pseudouridylate synthase 55 198 1.0E-15 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_36095 edfcd316a30747fd0e9945c29b96180f 229 Pfam PF00072 Response regulator receiver domain 5 116 8.4E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_36095 edfcd316a30747fd0e9945c29b96180f 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 2.2E-113 T 14-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 JV59_36095 edfcd316a30747fd0e9945c29b96180f 229 SMART SM00862 150 225 7.2E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_36095 edfcd316a30747fd0e9945c29b96180f 229 SMART SM00448 3 116 2.0E-45 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_36095 edfcd316a30747fd0e9945c29b96180f 229 SUPERFAMILY SSF52172 3 184 2.26E-43 T 14-10-2018 IPR011006 CheY-like superfamily JV59_36095 edfcd316a30747fd0e9945c29b96180f 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 2.5E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_36095 edfcd316a30747fd0e9945c29b96180f 229 Gene3D G3DSA:3.40.50.2300 1 126 8.5E-39 T 14-10-2018 JV59_36095 edfcd316a30747fd0e9945c29b96180f 229 Gene3D G3DSA:1.10.10.10 127 228 1.4E-40 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_33500 48dcf86e1f1c6e310e18cd95124f1ee6 248 Gene3D G3DSA:1.10.10.60 136 248 8.2E-19 T 14-10-2018 JV59_33500 48dcf86e1f1c6e310e18cd95124f1ee6 248 SMART SM00342 165 242 4.6E-7 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_33500 48dcf86e1f1c6e310e18cd95124f1ee6 248 SUPERFAMILY SSF46689 194 245 1.97E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_33500 48dcf86e1f1c6e310e18cd95124f1ee6 248 Pfam PF12833 Helix-turn-helix domain 168 244 1.8E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_01840 606f1c80c2ff9bad94178c2fe48b3ccf 895 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 398 553 2.5E-33 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JV59_01840 606f1c80c2ff9bad94178c2fe48b3ccf 895 Gene3D G3DSA:3.40.50.10050 689 795 5.3E-37 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily JV59_01840 606f1c80c2ff9bad94178c2fe48b3ccf 895 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 9.5E-9 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal JV59_01840 606f1c80c2ff9bad94178c2fe48b3ccf 895 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 319 369 1.6E-14 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal JV59_01840 606f1c80c2ff9bad94178c2fe48b3ccf 895 SUPERFAMILY SSF46955 3 50 2.01E-12 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily JV59_01840 606f1c80c2ff9bad94178c2fe48b3ccf 895 Gene3D G3DSA:3.40.50.300 391 565 1.3E-69 T 14-10-2018 JV59_01840 606f1c80c2ff9bad94178c2fe48b3ccf 895 SUPERFAMILY SSF50447 567 649 1.29E-22 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JV59_01840 606f1c80c2ff9bad94178c2fe48b3ccf 895 Gene3D G3DSA:2.40.30.10 566 684 2.4E-39 T 14-10-2018 JV59_01840 606f1c80c2ff9bad94178c2fe48b3ccf 895 Gene3D G3DSA:3.30.56.50 2 50 6.1E-23 T 14-10-2018 JV59_01840 606f1c80c2ff9bad94178c2fe48b3ccf 895 ProSitePatterns PS01176 Initiation factor 2 signature. 845 867 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 JV59_01840 606f1c80c2ff9bad94178c2fe48b3ccf 895 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 312 894 4.3E-285 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 JV59_01840 606f1c80c2ff9bad94178c2fe48b3ccf 895 Gene3D G3DSA:2.40.30.10 796 893 7.3E-35 T 14-10-2018 JV59_01840 606f1c80c2ff9bad94178c2fe48b3ccf 895 Pfam PF00009 Elongation factor Tu GTP binding domain 398 554 2.4E-32 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_01840 606f1c80c2ff9bad94178c2fe48b3ccf 895 SUPERFAMILY SSF52540 393 559 1.86E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_01840 606f1c80c2ff9bad94178c2fe48b3ccf 895 Pfam PF03144 Elongation factor Tu domain 2 815 881 1.7E-7 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 JV59_01840 606f1c80c2ff9bad94178c2fe48b3ccf 895 SUPERFAMILY SSF50447 796 892 2.75E-34 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JV59_01840 606f1c80c2ff9bad94178c2fe48b3ccf 895 Pfam PF11987 Translation-initiation factor 2 679 784 1.5E-36 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 JV59_01840 606f1c80c2ff9bad94178c2fe48b3ccf 895 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 7.3E-16 T 14-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial JV59_01840 606f1c80c2ff9bad94178c2fe48b3ccf 895 SUPERFAMILY SSF52156 671 801 2.62E-38 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily JV59_01840 606f1c80c2ff9bad94178c2fe48b3ccf 895 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 892 17.53 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 JV59_31700 528d178d75bcb2761da8dc0f087eb6ed 157 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 14-10-2018 IPR000614 Free Met sulfoxide reductase conserved site JV59_31700 528d178d75bcb2761da8dc0f087eb6ed 157 Pfam PF13185 GAF domain 44 145 3.2E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 JV59_31700 528d178d75bcb2761da8dc0f087eb6ed 157 Gene3D G3DSA:3.30.450.40 1 156 5.5E-62 T 14-10-2018 IPR029016 GAF-like domain superfamily JV59_31700 528d178d75bcb2761da8dc0f087eb6ed 157 SUPERFAMILY SSF55781 4 144 5.61E-39 T 14-10-2018 JV59_02930 720991d054b99b0d26c80da8c33f5c35 634 SUPERFAMILY SSF55874 10 216 9.04E-64 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_02930 720991d054b99b0d26c80da8c33f5c35 634 PIRSF PIRSF002583 1 634 4.7E-214 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 JV59_02930 720991d054b99b0d26c80da8c33f5c35 634 Gene3D G3DSA:3.30.565.10 6 220 1.4E-75 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_02930 720991d054b99b0d26c80da8c33f5c35 634 SMART SM00387 32 189 2.8E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_02930 720991d054b99b0d26c80da8c33f5c35 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 14-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 JV59_02930 720991d054b99b0d26c80da8c33f5c35 634 SUPERFAMILY SSF54211 238 493 2.81E-99 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JV59_02930 720991d054b99b0d26c80da8c33f5c35 634 Pfam PF00183 Hsp90 protein 225 633 4.2E-128 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 JV59_02930 720991d054b99b0d26c80da8c33f5c35 634 PRINTS PR00775 90kDa heat shock protein signature 31 53 5.4E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JV59_02930 720991d054b99b0d26c80da8c33f5c35 634 PRINTS PR00775 90kDa heat shock protein signature 98 115 5.4E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JV59_02930 720991d054b99b0d26c80da8c33f5c35 634 PRINTS PR00775 90kDa heat shock protein signature 10 30 5.4E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JV59_02930 720991d054b99b0d26c80da8c33f5c35 634 PRINTS PR00775 90kDa heat shock protein signature 125 147 5.4E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JV59_02930 720991d054b99b0d26c80da8c33f5c35 634 PRINTS PR00775 90kDa heat shock protein signature 80 97 5.4E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JV59_02930 720991d054b99b0d26c80da8c33f5c35 634 PRINTS PR00775 90kDa heat shock protein signature 195 213 5.4E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JV59_02930 720991d054b99b0d26c80da8c33f5c35 634 PRINTS PR00775 90kDa heat shock protein signature 177 194 5.4E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JV59_02930 720991d054b99b0d26c80da8c33f5c35 634 Gene3D G3DSA:3.30.230.80 237 409 3.3E-70 T 14-10-2018 JV59_02930 720991d054b99b0d26c80da8c33f5c35 634 Gene3D G3DSA:1.20.120.790 502 632 1.2E-42 T 14-10-2018 IPR037196 HSP90, C-terminal domain JV59_02930 720991d054b99b0d26c80da8c33f5c35 634 Gene3D G3DSA:3.40.50.11260 410 501 1.7E-34 T 14-10-2018 JV59_02930 720991d054b99b0d26c80da8c33f5c35 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 187 4.2E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_02930 720991d054b99b0d26c80da8c33f5c35 634 SUPERFAMILY SSF110942 520 632 9.42E-34 T 14-10-2018 IPR037196 HSP90, C-terminal domain JV59_02930 720991d054b99b0d26c80da8c33f5c35 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 32.309 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 JV59_27885 ccf0eaf96f1a689ce0ed4c2755e2b1c9 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 2.0E-39 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JV59_27885 ccf0eaf96f1a689ce0ed4c2755e2b1c9 329 Gene3D G3DSA:3.20.20.70 2 329 5.9E-82 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_27885 ccf0eaf96f1a689ce0ed4c2755e2b1c9 329 SUPERFAMILY SSF102114 6 283 3.27E-70 T 14-10-2018 JV59_27885 ccf0eaf96f1a689ce0ed4c2755e2b1c9 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 329 2.3E-104 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JV59_27885 ccf0eaf96f1a689ce0ed4c2755e2b1c9 329 Pfam PF04055 Radical SAM superfamily 19 181 1.8E-25 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JV59_27885 ccf0eaf96f1a689ce0ed4c2755e2b1c9 329 SMART SM00729 14 216 8.0E-5 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JV59_27885 ccf0eaf96f1a689ce0ed4c2755e2b1c9 329 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 329 36.547 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JV59_27885 ccf0eaf96f1a689ce0ed4c2755e2b1c9 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 7.5E-10 T 14-10-2018 JV59_38020 9f9fc2697ce29a4c3b3e43686baf2ce2 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 3.6E-5 T 14-10-2018 JV59_38020 9f9fc2697ce29a4c3b3e43686baf2ce2 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 3.6E-5 T 14-10-2018 JV59_38020 9f9fc2697ce29a4c3b3e43686baf2ce2 192 Gene3D G3DSA:3.40.50.880 1 192 2.8E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_38020 9f9fc2697ce29a4c3b3e43686baf2ce2 192 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.4E-36 T 14-10-2018 JV59_38020 9f9fc2697ce29a4c3b3e43686baf2ce2 192 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.4E-36 T 14-10-2018 JV59_38020 9f9fc2697ce29a4c3b3e43686baf2ce2 192 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.4E-36 T 14-10-2018 JV59_38020 9f9fc2697ce29a4c3b3e43686baf2ce2 192 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.4E-36 T 14-10-2018 JV59_38020 9f9fc2697ce29a4c3b3e43686baf2ce2 192 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.4E-36 T 14-10-2018 JV59_38020 9f9fc2697ce29a4c3b3e43686baf2ce2 192 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.4E-36 T 14-10-2018 JV59_38020 9f9fc2697ce29a4c3b3e43686baf2ce2 192 Pfam PF00117 Glutamine amidotransferase class-I 4 190 8.1E-54 T 14-10-2018 IPR017926 Glutamine amidotransferase JV59_38020 9f9fc2697ce29a4c3b3e43686baf2ce2 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 5.0E-86 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 JV59_38020 9f9fc2697ce29a4c3b3e43686baf2ce2 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.2E-13 T 14-10-2018 JV59_38020 9f9fc2697ce29a4c3b3e43686baf2ce2 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.2E-13 T 14-10-2018 JV59_38020 9f9fc2697ce29a4c3b3e43686baf2ce2 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 4.2E-13 T 14-10-2018 JV59_38020 9f9fc2697ce29a4c3b3e43686baf2ce2 192 SUPERFAMILY SSF52317 1 191 3.35E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_01790 7f2227bd3f6f497eacf9073632bd71c5 292 Pfam PF01136 Peptidase family U32 80 239 1.0E-14 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 JV59_36720 209fbf4e2d9e5e56dac7b3d38c1874fa 221 SUPERFAMILY SSF52980 2 220 3.49E-80 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JV59_36720 209fbf4e2d9e5e56dac7b3d38c1874fa 221 Gene3D G3DSA:3.40.600.10 1 221 2.9E-54 T 14-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 JV59_36720 209fbf4e2d9e5e56dac7b3d38c1874fa 221 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 5 219 1.9E-101 T 14-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 JV59_36720 209fbf4e2d9e5e56dac7b3d38c1874fa 221 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 2.6E-33 T 14-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 JV59_36720 209fbf4e2d9e5e56dac7b3d38c1874fa 221 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 221 146.306 T 14-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 JV59_36720 209fbf4e2d9e5e56dac7b3d38c1874fa 221 SMART SM00927 53 151 9.5E-63 T 14-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 JV59_01835 98b7d127c052f83569822b382d7862cd 495 SMART SM00316 133 198 2.5E-4 T 14-10-2018 IPR022967 RNA-binding domain, S1 JV59_01835 98b7d127c052f83569822b382d7862cd 495 Gene3D G3DSA:3.30.300.20 278 345 2.5E-24 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JV59_01835 98b7d127c052f83569822b382d7862cd 495 SUPERFAMILY SSF54814 279 343 2.88E-15 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 JV59_01835 98b7d127c052f83569822b382d7862cd 495 Gene3D G3DSA:1.10.150.20 352 421 2.8E-30 T 14-10-2018 JV59_01835 98b7d127c052f83569822b382d7862cd 495 Gene3D G3DSA:1.10.150.20 431 490 3.7E-24 T 14-10-2018 JV59_01835 98b7d127c052f83569822b382d7862cd 495 Gene3D G3DSA:2.40.50.140 135 198 2.9E-16 T 14-10-2018 JV59_01835 98b7d127c052f83569822b382d7862cd 495 Pfam PF08529 NusA N-terminal domain 4 123 4.5E-36 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 JV59_01835 98b7d127c052f83569822b382d7862cd 495 SUPERFAMILY SSF54814 201 278 9.81E-29 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 JV59_01835 98b7d127c052f83569822b382d7862cd 495 Pfam PF13184 NusA-like KH domain 230 297 3.1E-27 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 JV59_01835 98b7d127c052f83569822b382d7862cd 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 2.8E-7 T 14-10-2018 JV59_01835 98b7d127c052f83569822b382d7862cd 495 Gene3D G3DSA:3.30.300.20 199 277 2.4E-30 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JV59_01835 98b7d127c052f83569822b382d7862cd 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 1.6E-125 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 JV59_01835 98b7d127c052f83569822b382d7862cd 495 Gene3D G3DSA:3.30.1480.10 1 129 1.9E-44 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 JV59_01835 98b7d127c052f83569822b382d7862cd 495 SUPERFAMILY SSF47794 429 492 2.04E-16 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 JV59_01835 98b7d127c052f83569822b382d7862cd 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 28.784 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 JV59_01835 98b7d127c052f83569822b382d7862cd 495 SUPERFAMILY SSF50249 132 199 6.18E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_01835 98b7d127c052f83569822b382d7862cd 495 SUPERFAMILY SSF69705 1 126 5.49E-41 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 JV59_01835 98b7d127c052f83569822b382d7862cd 495 SUPERFAMILY SSF47794 356 415 1.43E-16 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 JV59_01835 98b7d127c052f83569822b382d7862cd 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 2.9E-22 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication JV59_01835 98b7d127c052f83569822b382d7862cd 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 7.6E-18 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication JV59_28300 72912fbce51c51bd380690eb1681e53a 248 SUPERFAMILY SSF56300 1 219 5.63E-32 T 14-10-2018 JV59_28300 72912fbce51c51bd380690eb1681e53a 248 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 241 117.689 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 JV59_28300 72912fbce51c51bd380690eb1681e53a 248 Gene3D G3DSA:3.60.21.10 1 237 5.9E-18 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JV59_28300 72912fbce51c51bd380690eb1681e53a 248 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 231 1.8E-106 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 JV59_28300 72912fbce51c51bd380690eb1681e53a 248 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 1.8E-9 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 JV59_35245 647f4ba1ddb91703a7cb1634a172e497 488 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JV59_35245 647f4ba1ddb91703a7cb1634a172e497 488 Gene3D G3DSA:3.40.50.300 124 308 3.8E-66 T 14-10-2018 JV59_35245 647f4ba1ddb91703a7cb1634a172e497 488 SUPERFAMILY SSF52540 137 378 2.08E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_35245 647f4ba1ddb91703a7cb1634a172e497 488 Pfam PF00158 Sigma-54 interaction domain 137 304 6.4E-73 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JV59_35245 647f4ba1ddb91703a7cb1634a172e497 488 Pfam PF06490 Flagellar regulatory protein FleQ 6 114 6.2E-31 T 14-10-2018 IPR010518 Flagellar regulatory FleQ JV59_35245 647f4ba1ddb91703a7cb1634a172e497 488 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JV59_35245 647f4ba1ddb91703a7cb1634a172e497 488 Gene3D G3DSA:1.10.8.60 309 385 2.9E-23 T 14-10-2018 JV59_35245 647f4ba1ddb91703a7cb1634a172e497 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 467 2.4E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_35245 647f4ba1ddb91703a7cb1634a172e497 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 467 487 2.4E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_35245 647f4ba1ddb91703a7cb1634a172e497 488 SUPERFAMILY SSF46689 349 486 4.66E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_35245 647f4ba1ddb91703a7cb1634a172e497 488 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site JV59_35245 647f4ba1ddb91703a7cb1634a172e497 488 Gene3D G3DSA:3.40.50.2300 1 117 4.3E-10 T 14-10-2018 JV59_35245 647f4ba1ddb91703a7cb1634a172e497 488 SMART SM00382 157 301 2.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_35245 647f4ba1ddb91703a7cb1634a172e497 488 Pfam PF02954 Bacterial regulatory protein, Fis family 444 484 3.4E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_35245 647f4ba1ddb91703a7cb1634a172e497 488 Gene3D G3DSA:1.10.10.60 424 488 4.2E-13 T 14-10-2018 JV59_37345 2d1e147bdf5965a99625e62d298ebf1b 458 SUPERFAMILY SSF88723 7 155 6.08E-13 T 14-10-2018 IPR029060 PIN-like domain superfamily JV59_37345 2d1e147bdf5965a99625e62d298ebf1b 458 SMART SM00670 7 141 7.6E-12 T 14-10-2018 IPR002716 PIN domain JV59_37345 2d1e147bdf5965a99625e62d298ebf1b 458 Gene3D G3DSA:3.40.50.1010 3 155 1.5E-27 T 14-10-2018 JV59_37345 2d1e147bdf5965a99625e62d298ebf1b 458 Pfam PF13638 PIN domain 9 150 1.5E-34 T 14-10-2018 IPR002716 PIN domain JV59_37345 2d1e147bdf5965a99625e62d298ebf1b 458 Gene3D G3DSA:3.40.50.300 245 456 4.8E-64 T 14-10-2018 JV59_37345 2d1e147bdf5965a99625e62d298ebf1b 458 SUPERFAMILY SSF52540 170 437 3.02E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_37345 2d1e147bdf5965a99625e62d298ebf1b 458 Pfam PF02562 PhoH-like protein 248 452 1.0E-52 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 JV59_17105 3df33df4ceea2d7ed37d9546a1ea8847 144 Pfam PF06127 Protein of unknown function (DUF962) 1 141 1.5E-19 T 14-10-2018 IPR009305 Protein of unknown function DUF962 JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 SMART SM00073 670 776 2.8E-8 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 Gene3D G3DSA:3.30.450.20 151 267 1.7E-21 T 14-10-2018 JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 Pfam PF00072 Response regulator receiver domain 529 637 3.3E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 507 5.1E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 Gene3D G3DSA:1.10.287.130 268 345 4.5E-21 T 14-10-2018 JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 SUPERFAMILY SSF47384 270 347 8.63E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 Gene3D G3DSA:3.30.565.10 348 511 6.1E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 SUPERFAMILY SSF55874 336 506 6.81E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 SMART SM00388 282 347 7.4E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 7.2E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 1.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 1.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 1.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 1.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 Pfam PF08448 PAS fold 162 271 2.1E-17 T 14-10-2018 IPR013656 PAS fold-4 JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 PIRSF PIRSF003182 1 779 0.0 T 14-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 SMART SM00387 394 510 1.5E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 Pfam PF01627 Hpt domain 690 764 2.2E-11 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 Gene3D G3DSA:1.20.120.160 662 779 1.7E-27 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 SUPERFAMILY SSF47226 668 778 9.03E-27 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 2.3E-17 T 14-10-2018 IPR000014 PAS domain JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 SMART SM00091 155 221 1.6E-6 T 14-10-2018 IPR000014 PAS domain JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 SUPERFAMILY SSF52172 526 644 1.05E-24 T 14-10-2018 IPR011006 CheY-like superfamily JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 SMART SM00448 527 638 6.2E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 SUPERFAMILY SSF55785 140 267 1.12E-24 T 14-10-2018 IPR035965 PAS domain superfamily JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 Gene3D G3DSA:3.40.50.2300 515 649 5.1E-27 T 14-10-2018 JV59_01890 7fe339cb4d587e52d24d4bc48bc0be82 779 Gene3D G3DSA:1.10.287.970 1 89 7.7E-39 T 14-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily JV59_35095 0b542ddcf1f98d35ede8e1cd42705185 377 SUPERFAMILY SSF51735 93 258 2.66E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_35095 0b542ddcf1f98d35ede8e1cd42705185 377 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 198 214 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JV59_35095 0b542ddcf1f98d35ede8e1cd42705185 377 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 257 2.0E-32 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 JV59_35095 0b542ddcf1f98d35ede8e1cd42705185 377 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 358 44.774 T 14-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 JV59_35095 0b542ddcf1f98d35ede8e1cd42705185 377 Gene3D G3DSA:3.40.50.720 1 279 4.3E-112 T 14-10-2018 JV59_35095 0b542ddcf1f98d35ede8e1cd42705185 377 Pfam PF11890 Domain of unknown function (DUF3410) 290 370 1.5E-28 T 14-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 JV59_35095 0b542ddcf1f98d35ede8e1cd42705185 377 SUPERFAMILY SSF52283 3 131 1.53E-22 T 14-10-2018 JV59_35095 0b542ddcf1f98d35ede8e1cd42705185 377 Gene3D G3DSA:3.30.1370.170 294 377 1.6E-32 T 14-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 JV59_35095 0b542ddcf1f98d35ede8e1cd42705185 377 Gene3D G3DSA:3.40.50.720 93 258 4.3E-112 T 14-10-2018 JV59_35095 0b542ddcf1f98d35ede8e1cd42705185 377 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 283 5.8E-24 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 JV59_01980 0f9113bde35165aff464390e55a6e263 211 SUPERFAMILY SSF47616 82 208 1.29E-22 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily JV59_01980 0f9113bde35165aff464390e55a6e263 211 Gene3D G3DSA:1.20.1050.10 89 193 5.6E-77 T 14-10-2018 JV59_01980 0f9113bde35165aff464390e55a6e263 211 SUPERFAMILY SSF52833 11 110 5.3E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_01980 0f9113bde35165aff464390e55a6e263 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 117 194 9.3E-8 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal JV59_01980 0f9113bde35165aff464390e55a6e263 211 Gene3D G3DSA:3.40.30.10 11 202 5.6E-77 T 14-10-2018 JV59_01980 0f9113bde35165aff464390e55a6e263 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.2E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 JV59_19305 e9583e1fa4cc0c6f0ffaf8da91cb4124 829 Gene3D G3DSA:3.40.50.740 98 623 0.0 T 14-10-2018 JV59_19305 e9583e1fa4cc0c6f0ffaf8da91cb4124 829 SUPERFAMILY SSF53706 38 696 9.95E-199 T 14-10-2018 JV59_19305 e9583e1fa4cc0c6f0ffaf8da91cb4124 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 1.9E-16 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_19305 e9583e1fa4cc0c6f0ffaf8da91cb4124 829 Gene3D G3DSA:2.40.40.20 705 828 7.3E-46 T 14-10-2018 JV59_19305 e9583e1fa4cc0c6f0ffaf8da91cb4124 829 Gene3D G3DSA:3.40.228.10 177 702 0.0 T 14-10-2018 JV59_19305 e9583e1fa4cc0c6f0ffaf8da91cb4124 829 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 828 32.468 T 14-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 JV59_19305 e9583e1fa4cc0c6f0ffaf8da91cb4124 829 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 JV59_19305 e9583e1fa4cc0c6f0ffaf8da91cb4124 829 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 14-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 JV59_19305 e9583e1fa4cc0c6f0ffaf8da91cb4124 829 Pfam PF00384 Molybdopterin oxidoreductase 98 570 3.5E-89 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_19305 e9583e1fa4cc0c6f0ffaf8da91cb4124 829 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 1.1E-27 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 JV59_19305 e9583e1fa4cc0c6f0ffaf8da91cb4124 829 SUPERFAMILY SSF50692 688 828 5.39E-43 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily JV59_19305 e9583e1fa4cc0c6f0ffaf8da91cb4124 829 Gene3D G3DSA:3.30.200.210 41 666 0.0 T 14-10-2018 JV59_19305 e9583e1fa4cc0c6f0ffaf8da91cb4124 829 SMART SM00926 41 95 1.9E-13 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_35835 b910ad7e7819e621f166346e03e81152 783 Gene3D G3DSA:3.40.50.200 143 544 1.2E-154 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 JV59_35835 b910ad7e7819e621f166346e03e81152 783 Gene3D G3DSA:2.60.120.260 681 783 1.4E-8 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily JV59_35835 b910ad7e7819e621f166346e03e81152 783 Pfam PF02225 PA domain 373 464 4.6E-5 T 14-10-2018 IPR003137 PA domain JV59_35835 b910ad7e7819e621f166346e03e81152 783 Pfam PF00082 Subtilase family 477 537 1.1E-12 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 JV59_35835 b910ad7e7819e621f166346e03e81152 783 Gene3D G3DSA:3.50.30.30 334 479 1.2E-154 T 14-10-2018 JV59_35835 b910ad7e7819e621f166346e03e81152 783 Pfam PF00082 Subtilase family 145 331 2.7E-27 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 JV59_35835 b910ad7e7819e621f166346e03e81152 783 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 579 647 6.8E-12 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial JV59_35835 b910ad7e7819e621f166346e03e81152 783 Gene3D G3DSA:3.30.70.80 37 124 1.6E-6 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 JV59_35835 b910ad7e7819e621f166346e03e81152 783 Pfam PF01483 Proprotein convertase P-domain 703 782 1.7E-21 T 14-10-2018 IPR002884 P domain GO:0004252|GO:0006508 JV59_35835 b910ad7e7819e621f166346e03e81152 783 SUPERFAMILY SSF49785 672 782 9.35E-21 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily JV59_35835 b910ad7e7819e621f166346e03e81152 783 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 487 497 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site JV59_35835 b910ad7e7819e621f166346e03e81152 783 Pfam PF05922 Peptidase inhibitor I9 43 119 7.2E-5 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 JV59_35835 b910ad7e7819e621f166346e03e81152 783 PRINTS PR00723 Subtilisin serine protease family (S8) signature 181 194 2.7E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related JV59_35835 b910ad7e7819e621f166346e03e81152 783 PRINTS PR00723 Subtilisin serine protease family (S8) signature 141 160 2.7E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related JV59_35835 b910ad7e7819e621f166346e03e81152 783 PRINTS PR00723 Subtilisin serine protease family (S8) signature 486 502 2.7E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related JV59_35835 b910ad7e7819e621f166346e03e81152 783 SUPERFAMILY SSF52743 122 548 1.52E-100 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 JV59_35835 b910ad7e7819e621f166346e03e81152 783 SUPERFAMILY SSF54897 41 118 8.5E-5 T 14-10-2018 JV59_35835 b910ad7e7819e621f166346e03e81152 783 Gene3D G3DSA:2.60.120.380 559 660 4.3E-33 T 14-10-2018 JV59_35835 b910ad7e7819e621f166346e03e81152 783 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 185 195 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site JV59_30750 327ec451b5260aa12deedae659d8a53e 204 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 1.3E-71 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JV59_30750 327ec451b5260aa12deedae659d8a53e 204 SUPERFAMILY SSF63380 93 197 2.55E-29 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JV59_30750 327ec451b5260aa12deedae659d8a53e 204 PIRSF PIRSF000498 1 204 1.5E-67 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JV59_30750 327ec451b5260aa12deedae659d8a53e 204 Gene3D G3DSA:2.40.30.20 1 89 2.2E-30 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_30750 327ec451b5260aa12deedae659d8a53e 204 Pfam PF00677 Lumazine binding domain 3 87 3.8E-21 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JV59_30750 327ec451b5260aa12deedae659d8a53e 204 Pfam PF00677 Lumazine binding domain 100 184 1.5E-20 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JV59_30750 327ec451b5260aa12deedae659d8a53e 204 Gene3D G3DSA:2.40.30.20 94 190 2.4E-28 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_30750 327ec451b5260aa12deedae659d8a53e 204 SUPERFAMILY SSF63380 1 93 5.27E-26 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JV59_34635 0c0fe54dd082f7dd4628a7bb460e82f4 317 SUPERFAMILY SSF51395 1 311 3.66E-74 T 14-10-2018 JV59_34635 0c0fe54dd082f7dd4628a7bb460e82f4 317 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 52.702 T 14-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 JV59_34635 0c0fe54dd082f7dd4628a7bb460e82f4 317 PIRSF PIRSF006621 1 317 4.2E-77 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 JV59_34635 0c0fe54dd082f7dd4628a7bb460e82f4 317 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 JV59_34635 0c0fe54dd082f7dd4628a7bb460e82f4 317 Gene3D G3DSA:3.20.20.70 1 242 2.2E-79 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_34635 0c0fe54dd082f7dd4628a7bb460e82f4 317 Gene3D G3DSA:1.20.225.30 243 314 4.9E-27 T 14-10-2018 JV59_34635 0c0fe54dd082f7dd4628a7bb460e82f4 317 Pfam PF01207 Dihydrouridine synthase (Dus) 5 300 3.4E-78 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 JV59_36230 938de40e521db6e37f810b74f39c04ac 386 PRINTS PR00959 Mevalonate kinase family signature 26 50 7.9E-43 T 14-10-2018 JV59_36230 938de40e521db6e37f810b74f39c04ac 386 PRINTS PR00959 Mevalonate kinase family signature 120 142 7.9E-43 T 14-10-2018 JV59_36230 938de40e521db6e37f810b74f39c04ac 386 PRINTS PR00959 Mevalonate kinase family signature 163 182 7.9E-43 T 14-10-2018 JV59_36230 938de40e521db6e37f810b74f39c04ac 386 PRINTS PR00959 Mevalonate kinase family signature 329 346 7.9E-43 T 14-10-2018 JV59_36230 938de40e521db6e37f810b74f39c04ac 386 PRINTS PR00473 Galactokinase signature 264 278 2.4E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JV59_36230 938de40e521db6e37f810b74f39c04ac 386 PRINTS PR00473 Galactokinase signature 113 131 2.4E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JV59_36230 938de40e521db6e37f810b74f39c04ac 386 PRINTS PR00473 Galactokinase signature 28 46 2.4E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JV59_36230 938de40e521db6e37f810b74f39c04ac 386 PRINTS PR00473 Galactokinase signature 93 104 2.4E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JV59_36230 938de40e521db6e37f810b74f39c04ac 386 SUPERFAMILY SSF54211 2 204 1.21E-62 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JV59_36230 938de40e521db6e37f810b74f39c04ac 386 Pfam PF08544 GHMP kinases C terminal 280 361 2.4E-10 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain JV59_36230 938de40e521db6e37f810b74f39c04ac 386 PIRSF PIRSF000530 1 385 4.5E-124 T 14-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JV59_36230 938de40e521db6e37f810b74f39c04ac 386 Pfam PF10509 Galactokinase galactose-binding signature 11 59 1.9E-21 T 14-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JV59_36230 938de40e521db6e37f810b74f39c04ac 386 Gene3D G3DSA:3.30.70.890 203 358 2.0E-132 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily JV59_36230 938de40e521db6e37f810b74f39c04ac 386 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 14-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JV59_36230 938de40e521db6e37f810b74f39c04ac 386 TIGRFAM TIGR00131 gal_kin: galactokinase 6 381 1.6E-148 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JV59_36230 938de40e521db6e37f810b74f39c04ac 386 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 JV59_36230 938de40e521db6e37f810b74f39c04ac 386 SUPERFAMILY SSF55060 206 382 5.12E-52 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily JV59_36230 938de40e521db6e37f810b74f39c04ac 386 Gene3D G3DSA:3.30.230.10 23 202 2.0E-132 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JV59_36230 938de40e521db6e37f810b74f39c04ac 386 Pfam PF00288 GHMP kinases N terminal domain 115 179 3.1E-10 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 JV59_36230 938de40e521db6e37f810b74f39c04ac 386 Hamap MF_00246 Galactokinase [galK]. 26 382 43.681 T 14-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JV59_32670 32fa43807396815e0c303fa8ccaa3365 160 SUPERFAMILY SSF55729 1 152 8.39E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_32670 32fa43807396815e0c303fa8ccaa3365 160 Pfam PF00583 Acetyltransferase (GNAT) family 39 134 1.1E-7 T 14-10-2018 IPR000182 GNAT domain JV59_32670 32fa43807396815e0c303fa8ccaa3365 160 Gene3D G3DSA:3.40.630.30 1 156 1.1E-21 T 14-10-2018 JV59_23005 92133950343a22b725f216c7bed78a42 159 Pfam PF00034 Cytochrome c 58 133 8.8E-6 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_23005 92133950343a22b725f216c7bed78a42 159 SUPERFAMILY SSF46626 56 132 4.8E-18 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_23005 92133950343a22b725f216c7bed78a42 159 Gene3D G3DSA:1.10.760.10 59 133 2.5E-19 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_18615 8b5ebf8989134c32c24207a2812973b1 130 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 12 106 3.0E-37 T 14-10-2018 IPR020483 Uncharacterised protein family YgbA JV59_18615 8b5ebf8989134c32c24207a2812973b1 130 Pfam PF11756 Nitrous oxide-stimulated promoter 12 116 5.0E-46 T 14-10-2018 IPR020483 Uncharacterised protein family YgbA JV59_22585 d50e4b9f25486d1de450e02502986ac4 700 Gene3D G3DSA:3.40.50.2300 578 699 7.4E-37 T 14-10-2018 JV59_22585 d50e4b9f25486d1de450e02502986ac4 700 Gene3D G3DSA:1.10.287.130 201 296 4.1E-25 T 14-10-2018 JV59_22585 d50e4b9f25486d1de450e02502986ac4 700 SMART SM00387 345 458 1.9E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_22585 d50e4b9f25486d1de450e02502986ac4 700 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 456 2.8E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_22585 d50e4b9f25486d1de450e02502986ac4 700 SUPERFAMILY SSF52172 580 699 3.84E-34 T 14-10-2018 IPR011006 CheY-like superfamily JV59_22585 d50e4b9f25486d1de450e02502986ac4 700 Pfam PF00512 His Kinase A (phospho-acceptor) domain 233 298 2.7E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_22585 d50e4b9f25486d1de450e02502986ac4 700 SUPERFAMILY SSF55874 287 460 1.06E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_22585 d50e4b9f25486d1de450e02502986ac4 700 Gene3D G3DSA:3.30.565.10 297 462 1.5E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_22585 d50e4b9f25486d1de450e02502986ac4 700 SMART SM00388 233 298 4.8E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_22585 d50e4b9f25486d1de450e02502986ac4 700 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 397 1.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_22585 d50e4b9f25486d1de450e02502986ac4 700 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 436 1.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_22585 d50e4b9f25486d1de450e02502986ac4 700 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 455 1.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_22585 d50e4b9f25486d1de450e02502986ac4 700 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 411 1.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_22585 d50e4b9f25486d1de450e02502986ac4 700 SMART SM00448 583 696 3.8E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_22585 d50e4b9f25486d1de450e02502986ac4 700 SUPERFAMILY SSF47384 220 299 3.53E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_22585 d50e4b9f25486d1de450e02502986ac4 700 Pfam PF00072 Response regulator receiver domain 585 695 7.1E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_31300 c3793c04cd1afb4b98db4384deb8ce1b 242 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 76 89 2.5E-18 T 14-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 JV59_31300 c3793c04cd1afb4b98db4384deb8ce1b 242 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 96 111 2.5E-18 T 14-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 JV59_31300 c3793c04cd1afb4b98db4384deb8ce1b 242 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 116 129 2.5E-18 T 14-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 JV59_31300 c3793c04cd1afb4b98db4384deb8ce1b 242 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 23 33 2.5E-18 T 14-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 JV59_31300 c3793c04cd1afb4b98db4384deb8ce1b 242 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 166 178 2.5E-18 T 14-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 JV59_31300 c3793c04cd1afb4b98db4384deb8ce1b 242 Gene3D G3DSA:3.30.300.30 97 195 2.5E-32 T 14-10-2018 JV59_31300 c3793c04cd1afb4b98db4384deb8ce1b 242 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 6 194 9.5E-66 T 14-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 JV59_31300 c3793c04cd1afb4b98db4384deb8ce1b 242 Gene3D G3DSA:3.30.70.1530 18 90 5.4E-25 T 14-10-2018 JV59_31300 c3793c04cd1afb4b98db4384deb8ce1b 242 Pfam PF01514 Secretory protein of YscJ/FliF family 9 186 3.5E-28 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF JV59_27935 b3ab9647cbbfc929a8a52264d9e9b2b4 252 Pfam PF01048 Phosphorylase superfamily 20 244 3.7E-40 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 JV59_27935 b3ab9647cbbfc929a8a52264d9e9b2b4 252 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 JV59_27935 b3ab9647cbbfc929a8a52264d9e9b2b4 252 SUPERFAMILY SSF53167 5 249 1.96E-72 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 JV59_27935 b3ab9647cbbfc929a8a52264d9e9b2b4 252 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 1.4E-110 T 14-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 JV59_27935 b3ab9647cbbfc929a8a52264d9e9b2b4 252 Gene3D G3DSA:3.40.50.1580 1 252 4.4E-81 T 14-10-2018 JV59_24765 69de100866e910d8704f3153e015fdb9 5079 SUPERFAMILY SSF63829 583 867 2.22E-8 T 14-10-2018 JV59_24765 69de100866e910d8704f3153e015fdb9 5079 SUPERFAMILY SSF51120 3348 3551 3.92E-5 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal JV59_16870 8884c827c987e991f7961f2da8398632 526 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 21 509 2.8E-106 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 JV59_16870 8884c827c987e991f7961f2da8398632 526 ProSitePatterns PS00217 Sugar transport proteins signature 2. 115 140 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JV59_16870 8884c827c987e991f7961f2da8398632 526 SUPERFAMILY SSF103473 10 514 1.96E-56 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_16870 8884c827c987e991f7961f2da8398632 526 Gene3D G3DSA:1.20.1720.10 23 197 4.1E-37 T 14-10-2018 JV59_16870 8884c827c987e991f7961f2da8398632 526 Pfam PF07690 Major Facilitator Superfamily 24 417 2.0E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_17300 e5053be673fd6f9c856543cf9d59ff93 334 SUPERFAMILY SSF47413 1 59 1.56E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_17300 e5053be673fd6f9c856543cf9d59ff93 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.7E-21 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_17300 e5053be673fd6f9c856543cf9d59ff93 334 Gene3D G3DSA:1.10.260.40 3 59 7.6E-25 T 14-10-2018 JV59_17300 e5053be673fd6f9c856543cf9d59ff93 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 JV59_17300 e5053be673fd6f9c856543cf9d59ff93 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.7E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_17300 e5053be673fd6f9c856543cf9d59ff93 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.7E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_17300 e5053be673fd6f9c856543cf9d59ff93 334 SUPERFAMILY SSF53822 60 331 4.12E-94 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_17300 e5053be673fd6f9c856543cf9d59ff93 334 Pfam PF13377 Periplasmic binding protein-like domain 170 330 1.7E-40 T 14-10-2018 JV59_17300 e5053be673fd6f9c856543cf9d59ff93 334 Gene3D G3DSA:3.40.50.2300 69 322 4.9E-88 T 14-10-2018 JV59_17300 e5053be673fd6f9c856543cf9d59ff93 334 SMART SM00354 1 71 9.8E-38 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_17300 e5053be673fd6f9c856543cf9d59ff93 334 Gene3D G3DSA:3.40.50.2300 161 290 4.9E-88 T 14-10-2018 JV59_36425 5b1e8888e1b688fef66f4b8cf0d484bd 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 14-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 JV59_36425 5b1e8888e1b688fef66f4b8cf0d484bd 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 92 6.0E-15 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JV59_36425 5b1e8888e1b688fef66f4b8cf0d484bd 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 3.0E-60 T 14-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 JV59_36425 5b1e8888e1b688fef66f4b8cf0d484bd 112 PRINTS PR00355 Adrenodoxin signature 42 52 3.2E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 JV59_36425 5b1e8888e1b688fef66f4b8cf0d484bd 112 PRINTS PR00355 Adrenodoxin signature 60 74 3.2E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 JV59_36425 5b1e8888e1b688fef66f4b8cf0d484bd 112 PRINTS PR00355 Adrenodoxin signature 83 91 3.2E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 JV59_36425 5b1e8888e1b688fef66f4b8cf0d484bd 112 Gene3D G3DSA:3.10.20.30 1 112 3.1E-36 T 14-10-2018 IPR012675 Beta-grasp domain superfamily JV59_36425 5b1e8888e1b688fef66f4b8cf0d484bd 112 SUPERFAMILY SSF54292 5 107 2.49E-32 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JV59_23600 f0681bf8822197759435026b1d5d1ece 282 SUPERFAMILY SSF53474 34 271 8.19E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_23600 f0681bf8822197759435026b1d5d1ece 282 Pfam PF12146 Serine aminopeptidase, S33 83 186 1.3E-12 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 JV59_23600 f0681bf8822197759435026b1d5d1ece 282 Gene3D G3DSA:3.40.50.1820 71 281 5.8E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_19360 6733a215bac81b62b80834367e38609b 394 SUPERFAMILY SSF51735 42 149 8.72E-6 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_19360 6733a215bac81b62b80834367e38609b 394 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 84 319 9.6E-96 T 14-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JV59_19360 6733a215bac81b62b80834367e38609b 394 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 1.4E-24 T 14-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JV59_19360 6733a215bac81b62b80834367e38609b 394 Gene3D G3DSA:3.40.50.720 1 393 1.4E-164 T 14-10-2018 JV59_19360 6733a215bac81b62b80834367e38609b 394 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 394 49.567 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JV59_19360 6733a215bac81b62b80834367e38609b 394 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 81 7.2E-32 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JV59_20910 e1bce849e5734084999571d8bd32de97 531 SMART SM00304 200 254 1.5E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_20910 e1bce849e5734084999571d8bd32de97 531 SUPERFAMILY SSF58104 222 531 9.02E-72 T 14-10-2018 JV59_20910 e1bce849e5734084999571d8bd32de97 531 Gene3D G3DSA:1.10.287.950 200 531 6.5E-69 T 14-10-2018 JV59_20910 e1bce849e5734084999571d8bd32de97 531 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 334 496 3.4E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_20910 e1bce849e5734084999571d8bd32de97 531 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 1.9E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_20910 e1bce849e5734084999571d8bd32de97 531 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 297 326 1.9E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_20910 e1bce849e5734084999571d8bd32de97 531 SMART SM00283 269 530 3.1E-64 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_38585 c52d49c36af423c96832d39560363a6e 184 Gene3D G3DSA:2.160.10.10 3 183 2.5E-44 T 14-10-2018 JV59_38585 c52d49c36af423c96832d39560363a6e 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 122 155 1.6E-4 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_38585 c52d49c36af423c96832d39560363a6e 184 SUPERFAMILY SSF51161 43 173 1.52E-23 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JV59_39055 c53daaafef1ce436b010fcf4b33ddc8e 194 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 72 108 3.5E-16 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 JV59_39055 c53daaafef1ce436b010fcf4b33ddc8e 194 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 159 178 3.0 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 JV59_39055 c53daaafef1ce436b010fcf4b33ddc8e 194 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 119 155 6.3E-14 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 JV59_39055 c53daaafef1ce436b010fcf4b33ddc8e 194 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 21 62 7.0E-10 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 JV59_39055 c53daaafef1ce436b010fcf4b33ddc8e 194 SUPERFAMILY SSF57783 115 150 3.74E-5 T 14-10-2018 JV59_39055 c53daaafef1ce436b010fcf4b33ddc8e 194 SUPERFAMILY SSF57783 18 69 4.19E-11 T 14-10-2018 JV59_39055 c53daaafef1ce436b010fcf4b33ddc8e 194 Gene3D G3DSA:3.30.65.10 64 106 2.9E-7 T 14-10-2018 JV59_39055 c53daaafef1ce436b010fcf4b33ddc8e 194 Gene3D G3DSA:3.30.65.10 107 159 1.3E-5 T 14-10-2018 JV59_39055 c53daaafef1ce436b010fcf4b33ddc8e 194 SUPERFAMILY SSF57783 71 110 8.16E-13 T 14-10-2018 JV59_30145 a2b69468878adf12755a3069277759cd 1022 SUPERFAMILY SSF82693 45 136 2.09E-9 T 14-10-2018 JV59_30145 a2b69468878adf12755a3069277759cd 1022 Pfam PF00873 AcrB/AcrD/AcrF family 5 1006 1.6E-238 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_30145 a2b69468878adf12755a3069277759cd 1022 Gene3D G3DSA:3.30.70.1440 649 846 6.5E-261 T 14-10-2018 JV59_30145 a2b69468878adf12755a3069277759cd 1022 Gene3D G3DSA:1.20.1640.10 10 505 6.5E-261 T 14-10-2018 JV59_30145 a2b69468878adf12755a3069277759cd 1022 SUPERFAMILY SSF82693 558 643 2.14E-5 T 14-10-2018 JV59_30145 a2b69468878adf12755a3069277759cd 1022 Gene3D G3DSA:3.30.2090.10 700 789 6.5E-261 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_30145 a2b69468878adf12755a3069277759cd 1022 Gene3D G3DSA:3.30.70.1430 40 797 6.5E-261 T 14-10-2018 JV59_30145 a2b69468878adf12755a3069277759cd 1022 SUPERFAMILY SSF82866 785 1011 1.16E-45 T 14-10-2018 JV59_30145 a2b69468878adf12755a3069277759cd 1022 Gene3D G3DSA:3.30.70.1430 560 648 6.5E-261 T 14-10-2018 JV59_30145 a2b69468878adf12755a3069277759cd 1022 Gene3D G3DSA:3.30.2090.10 184 275 6.5E-261 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_30145 a2b69468878adf12755a3069277759cd 1022 SUPERFAMILY SSF82714 188 270 7.06E-18 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_30145 a2b69468878adf12755a3069277759cd 1022 Gene3D G3DSA:3.30.70.1320 137 330 6.5E-261 T 14-10-2018 JV59_30145 a2b69468878adf12755a3069277759cd 1022 SUPERFAMILY SSF82714 705 785 1.7E-9 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_30145 a2b69468878adf12755a3069277759cd 1022 SUPERFAMILY SSF82866 297 494 2.88E-50 T 14-10-2018 JV59_30145 a2b69468878adf12755a3069277759cd 1022 PRINTS PR00702 Acriflavin resistance protein family signature 604 618 2.5E-64 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_30145 a2b69468878adf12755a3069277759cd 1022 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.5E-64 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_30145 a2b69468878adf12755a3069277759cd 1022 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 2.5E-64 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_30145 a2b69468878adf12755a3069277759cd 1022 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 2.5E-64 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_30145 a2b69468878adf12755a3069277759cd 1022 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 2.5E-64 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_30145 a2b69468878adf12755a3069277759cd 1022 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 2.5E-64 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_30145 a2b69468878adf12755a3069277759cd 1022 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 2.5E-64 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_30145 a2b69468878adf12755a3069277759cd 1022 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.5E-64 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_30145 a2b69468878adf12755a3069277759cd 1022 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 2.5E-64 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_30145 a2b69468878adf12755a3069277759cd 1022 Gene3D G3DSA:1.20.1640.10 506 1003 6.5E-261 T 14-10-2018 JV59_22565 b91580ff52938720c20000c20c35bca3 796 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 40 147 7.3E-24 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead JV59_22565 b91580ff52938720c20000c20c35bca3 796 Gene3D G3DSA:3.90.1170.50 26 147 1.1E-284 T 14-10-2018 JV59_22565 b91580ff52938720c20000c20c35bca3 796 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 26 781 0.0 T 14-10-2018 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 JV59_22565 b91580ff52938720c20000c20c35bca3 796 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 168 710 3.6E-205 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 JV59_22565 b91580ff52938720c20000c20c35bca3 796 Gene3D G3DSA:3.30.365.10 195 289 1.1E-284 T 14-10-2018 JV59_22565 b91580ff52938720c20000c20c35bca3 796 Gene3D G3DSA:3.30.365.10 466 612 1.1E-284 T 14-10-2018 JV59_22565 b91580ff52938720c20000c20c35bca3 796 SUPERFAMILY SSF54665 11 148 8.37E-40 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily JV59_22565 b91580ff52938720c20000c20c35bca3 796 Gene3D G3DSA:3.30.365.10 161 414 1.1E-284 T 14-10-2018 JV59_22565 b91580ff52938720c20000c20c35bca3 796 SMART SM01008 40 147 1.7E-39 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead JV59_22565 b91580ff52938720c20000c20c35bca3 796 SUPERFAMILY SSF56003 147 780 6.28E-208 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 JV59_22565 b91580ff52938720c20000c20c35bca3 796 Gene3D G3DSA:3.30.365.10 148 777 1.1E-284 T 14-10-2018 JV59_26265 807a420014e29a5f34cfc87638b4c693 447 SUPERFAMILY SSF111283 12 447 4.32E-127 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 JV59_26265 807a420014e29a5f34cfc87638b4c693 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 1.2E-60 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 JV59_26265 807a420014e29a5f34cfc87638b4c693 447 Gene3D G3DSA:3.30.2290.10 3 233 1.0E-80 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal JV59_39310 16b87c39af86bcab7e9246fe901c4f31 270 Pfam PF00119 ATP synthase A chain 44 262 1.0E-57 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39310 16b87c39af86bcab7e9246fe901c4f31 270 SUPERFAMILY SSF81336 93 262 7.19E-50 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39310 16b87c39af86bcab7e9246fe901c4f31 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 268 15.271 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39310 16b87c39af86bcab7e9246fe901c4f31 270 PRINTS PR00123 ATP synthase A subunit signature 200 222 7.9E-14 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39310 16b87c39af86bcab7e9246fe901c4f31 270 PRINTS PR00123 ATP synthase A subunit signature 101 117 7.9E-14 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39310 16b87c39af86bcab7e9246fe901c4f31 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 7.9E-14 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39310 16b87c39af86bcab7e9246fe901c4f31 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 203 212 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39310 16b87c39af86bcab7e9246fe901c4f31 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 263 1.7E-45 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39310 16b87c39af86bcab7e9246fe901c4f31 270 Gene3D G3DSA:1.20.120.220 92 268 3.2E-66 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_00850 a0b6df81c8456738bacedf4e2f42b029 392 Gene3D G3DSA:3.80.30.20 1 308 5.9E-96 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe JV59_00850 a0b6df81c8456738bacedf4e2f42b029 392 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 9 380 4.6E-136 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 JV59_00850 a0b6df81c8456738bacedf4e2f42b029 392 SUPERFAMILY SSF102114 5 388 6.93E-108 T 14-10-2018 JV59_00850 a0b6df81c8456738bacedf4e2f42b029 392 Pfam PF06969 HemN C-terminal domain 316 376 5.6E-8 T 14-10-2018 IPR010723 HemN, C-terminal JV59_00850 a0b6df81c8456738bacedf4e2f42b029 392 SMART SM00729 8 229 1.8E-54 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JV59_00850 a0b6df81c8456738bacedf4e2f42b029 392 Pfam PF04055 Radical SAM superfamily 13 183 5.7E-19 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JV59_25745 e312fe967deb136ee765456966079ba0 541 SMART SM00448 4 116 3.1E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_25745 e312fe967deb136ee765456966079ba0 541 Gene3D G3DSA:3.20.20.450 289 538 1.1E-62 T 14-10-2018 IPR035919 EAL domain superfamily JV59_25745 e312fe967deb136ee765456966079ba0 541 Pfam PF00072 Response regulator receiver domain 6 116 6.0E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_25745 e312fe967deb136ee765456966079ba0 541 SUPERFAMILY SSF52172 5 181 2.56E-32 T 14-10-2018 IPR011006 CheY-like superfamily JV59_25745 e312fe967deb136ee765456966079ba0 541 Pfam PF00990 Diguanylate cyclase, GGDEF domain 127 227 1.7E-7 T 14-10-2018 IPR000160 GGDEF domain JV59_25745 e312fe967deb136ee765456966079ba0 541 SUPERFAMILY SSF141868 290 535 6.67E-64 T 14-10-2018 IPR035919 EAL domain superfamily JV59_25745 e312fe967deb136ee765456966079ba0 541 Gene3D G3DSA:3.30.70.270 124 246 3.0E-10 T 14-10-2018 JV59_25745 e312fe967deb136ee765456966079ba0 541 Gene3D G3DSA:3.40.50.2300 2 123 5.3E-31 T 14-10-2018 JV59_25745 e312fe967deb136ee765456966079ba0 541 Pfam PF00563 EAL domain 291 522 8.4E-53 T 14-10-2018 IPR001633 EAL domain JV59_25745 e312fe967deb136ee765456966079ba0 541 SMART SM00052 284 527 8.9E-56 T 14-10-2018 IPR001633 EAL domain JV59_34500 7039d1b66e0ce1019dfed49995491dab 307 Gene3D G3DSA:3.40.366.10 7 286 1.2E-107 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 JV59_34500 7039d1b66e0ce1019dfed49995491dab 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 2.6E-43 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain JV59_34500 7039d1b66e0ce1019dfed49995491dab 307 SUPERFAMILY SSF55048 128 197 1.15E-18 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding JV59_34500 7039d1b66e0ce1019dfed49995491dab 307 Gene3D G3DSA:3.30.70.250 125 197 1.2E-107 T 14-10-2018 JV59_34500 7039d1b66e0ce1019dfed49995491dab 307 PIRSF PIRSF000446 1 307 6.8E-135 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 JV59_34500 7039d1b66e0ce1019dfed49995491dab 307 Pfam PF00698 Acyl transferase domain 7 291 1.5E-37 T 14-10-2018 IPR014043 Acyl transferase JV59_34500 7039d1b66e0ce1019dfed49995491dab 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 1.4E-125 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 JV59_34500 7039d1b66e0ce1019dfed49995491dab 307 SUPERFAMILY SSF52151 4 305 9.68E-82 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JV59_16100 958be20fa119f5c1952b171826c5839b 444 Pfam PF01979 Amidohydrolase family 51 424 7.7E-20 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JV59_16100 958be20fa119f5c1952b171826c5839b 444 Gene3D G3DSA:2.30.40.10 6 425 2.8E-133 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JV59_16100 958be20fa119f5c1952b171826c5839b 444 SUPERFAMILY SSF51556 55 371 4.81E-89 T 14-10-2018 IPR032466 Metal-dependent hydrolase JV59_16100 958be20fa119f5c1952b171826c5839b 444 ProSitePatterns PS00483 Dihydroorotase signature 2. 306 317 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JV59_16100 958be20fa119f5c1952b171826c5839b 444 Gene3D G3DSA:3.20.20.140 56 410 2.8E-133 T 14-10-2018 JV59_16100 958be20fa119f5c1952b171826c5839b 444 SUPERFAMILY SSF51338 1 434 2.96E-28 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JV59_17640 15718c954afe6d16c965ff9c14cdf2b3 66 SUPERFAMILY SSF116734 17 52 3.6E-5 T 14-10-2018 JV59_24185 7fa7e531d31d7e8b06bf57db647d53c7 316 Pfam PF04463 Protein of unknown function (DUF523) 7 148 2.2E-35 T 14-10-2018 IPR007553 Domain of unknown function DUF523 JV59_24185 7fa7e531d31d7e8b06bf57db647d53c7 316 PIRSF PIRSF037004 1 316 6.6E-136 T 14-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 JV59_24185 7fa7e531d31d7e8b06bf57db647d53c7 316 Pfam PF08349 Protein of unknown function (DUF1722) 191 307 3.4E-45 T 14-10-2018 IPR013560 Domain of unknown function DUF1722 JV59_18555 90cadddfc9acb7c3a527a5c6da4ec8e1 411 Gene3D G3DSA:1.20.1170.10 103 411 9.1E-15 T 14-10-2018 JV59_18555 90cadddfc9acb7c3a527a5c6da4ec8e1 411 SUPERFAMILY SSF58100 70 409 1.39E-42 T 14-10-2018 JV59_34980 c36c4c42d60528985ea4d1e8a2d51a94 244 PRINTS PR00046 Major sigma-70 factor signature 207 222 5.6E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_34980 c36c4c42d60528985ea4d1e8a2d51a94 244 PRINTS PR00046 Major sigma-70 factor signature 222 233 5.6E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_34980 c36c4c42d60528985ea4d1e8a2d51a94 244 PRINTS PR00046 Major sigma-70 factor signature 46 59 5.6E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_34980 c36c4c42d60528985ea4d1e8a2d51a94 244 PRINTS PR00046 Major sigma-70 factor signature 190 202 5.6E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_34980 c36c4c42d60528985ea4d1e8a2d51a94 244 SUPERFAMILY SSF88946 7 91 1.7E-23 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JV59_34980 c36c4c42d60528985ea4d1e8a2d51a94 244 SUPERFAMILY SSF88659 92 163 1.79E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JV59_34980 c36c4c42d60528985ea4d1e8a2d51a94 244 Pfam PF04545 Sigma-70, region 4 187 234 2.2E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 JV59_34980 c36c4c42d60528985ea4d1e8a2d51a94 244 SUPERFAMILY SSF88659 165 237 1.83E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JV59_34980 c36c4c42d60528985ea4d1e8a2d51a94 244 Gene3D G3DSA:1.10.1740.10 4 88 1.8E-28 T 14-10-2018 JV59_34980 c36c4c42d60528985ea4d1e8a2d51a94 244 PIRSF PIRSF000770 3 241 8.9E-38 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_34980 c36c4c42d60528985ea4d1e8a2d51a94 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 240 63.386 T 14-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 JV59_34980 c36c4c42d60528985ea4d1e8a2d51a94 244 Pfam PF04539 Sigma-70 region 3 100 157 9.2E-13 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 JV59_34980 c36c4c42d60528985ea4d1e8a2d51a94 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 20 238 1.5E-83 T 14-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 JV59_34980 c36c4c42d60528985ea4d1e8a2d51a94 244 Gene3D G3DSA:1.20.140.160 90 239 1.4E-44 T 14-10-2018 JV59_34980 c36c4c42d60528985ea4d1e8a2d51a94 244 Pfam PF04542 Sigma-70 region 2 20 91 8.7E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JV59_34980 c36c4c42d60528985ea4d1e8a2d51a94 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 237 4.7E-32 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JV59_36550 060b3124380c807b45e699ca5a179de2 177 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 8 172 4.3E-49 T 14-10-2018 IPR002786 Non-canonical purine NTP phosphatase JV59_36550 060b3124380c807b45e699ca5a179de2 177 SUPERFAMILY SSF52972 4 173 1.26E-59 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like JV59_36550 060b3124380c807b45e699ca5a179de2 177 Pfam PF01931 Protein of unknown function DUF84 9 167 1.1E-56 T 14-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 JV59_36550 060b3124380c807b45e699ca5a179de2 177 Hamap MF_00648 Non-canonical purine NTP phosphatase. 4 173 30.06 T 14-10-2018 IPR002786 Non-canonical purine NTP phosphatase JV59_36550 060b3124380c807b45e699ca5a179de2 177 Gene3D G3DSA:3.90.950.10 1 176 1.5E-68 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like JV59_02345 f524f26522d72f373048ed40a9d5a0b3 363 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 59 326 9.7E-68 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 JV59_02345 f524f26522d72f373048ed40a9d5a0b3 363 Gene3D G3DSA:3.40.630.10 23 328 9.6E-92 T 14-10-2018 JV59_02345 f524f26522d72f373048ed40a9d5a0b3 363 PIRSF PIRSF039012 14 334 2.7E-91 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 JV59_02345 f524f26522d72f373048ed40a9d5a0b3 363 SUPERFAMILY SSF53187 36 328 3.64E-74 T 14-10-2018 JV59_37585 e32389c3ea2565f2c001481b82db266f 357 SUPERFAMILY SSF56349 69 354 4.12E-43 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JV59_37585 e32389c3ea2565f2c001481b82db266f 357 Pfam PF00589 Phage integrase family 212 347 9.7E-22 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JV59_37585 e32389c3ea2565f2c001481b82db266f 357 Gene3D G3DSA:1.10.443.10 182 357 6.7E-27 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JV59_38700 67675f7a45da6a059781795a7e5e288a 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 4.1E-120 T 14-10-2018 IPR005229 Conserved hypothetical protein CHP00255 JV59_38700 67675f7a45da6a059781795a7e5e288a 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 1.3E-43 T 14-10-2018 IPR013527 YicC-like, N-terminal JV59_38700 67675f7a45da6a059781795a7e5e288a 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 1.8E-34 T 14-10-2018 IPR013551 Domain of unknown function DUF1732 JV59_27625 47f78b4b79bfaf6823fe6fe45f1f1878 879 Pfam PF12838 4Fe-4S dicluster domain 377 430 9.3E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JV59_27625 47f78b4b79bfaf6823fe6fe45f1f1878 879 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 378 389 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JV59_27625 47f78b4b79bfaf6823fe6fe45f1f1878 879 Gene3D G3DSA:3.40.50.11540 145 290 5.9E-14 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_27625 47f78b4b79bfaf6823fe6fe45f1f1878 879 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 448 3.3E-192 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 JV59_27625 47f78b4b79bfaf6823fe6fe45f1f1878 879 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JV59_27625 47f78b4b79bfaf6823fe6fe45f1f1878 879 Gene3D G3DSA:1.10.1060.10 364 445 2.6E-11 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JV59_27625 47f78b4b79bfaf6823fe6fe45f1f1878 879 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 760 248.3 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 JV59_27625 47f78b4b79bfaf6823fe6fe45f1f1878 879 SUPERFAMILY SSF46548 336 447 1.45E-20 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JV59_27625 47f78b4b79bfaf6823fe6fe45f1f1878 879 SUPERFAMILY SSF142019 97 302 1.09E-61 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_27625 47f78b4b79bfaf6823fe6fe45f1f1878 879 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 116 4.4E-35 T 14-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain JV59_27625 47f78b4b79bfaf6823fe6fe45f1f1878 879 Pfam PF10531 SLBB domain 296 345 1.2E-8 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_27625 47f78b4b79bfaf6823fe6fe45f1f1878 879 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 5.0E-48 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_36285 d08ff5553aafe25ed995187bd0f02e0c 747 Gene3D G3DSA:2.60.40.2340 171 256 8.0E-7 T 14-10-2018 JV59_36285 d08ff5553aafe25ed995187bd0f02e0c 747 Gene3D G3DSA:2.60.120.260 31 165 4.7E-12 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily JV59_36285 d08ff5553aafe25ed995187bd0f02e0c 747 SUPERFAMILY SSF48208 261 719 1.46E-23 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 JV59_36285 d08ff5553aafe25ed995187bd0f02e0c 747 Gene3D G3DSA:1.50.10.10 314 621 2.2E-8 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 JV59_01650 7d54e6f372b8563d193ef388afeac45f 560 Gene3D G3DSA:3.10.105.10 272 519 5.9E-192 T 14-10-2018 JV59_01650 7d54e6f372b8563d193ef388afeac45f 560 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 456 2.3E-75 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain JV59_01650 7d54e6f372b8563d193ef388afeac45f 560 Gene3D G3DSA:3.90.76.10 66 172 5.9E-192 T 14-10-2018 JV59_01650 7d54e6f372b8563d193ef388afeac45f 560 Gene3D G3DSA:3.40.190.10 46 543 5.9E-192 T 14-10-2018 JV59_01650 7d54e6f372b8563d193ef388afeac45f 560 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 84 106 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site JV59_01650 7d54e6f372b8563d193ef388afeac45f 560 PIRSF PIRSF002741 5 542 2.1E-69 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 JV59_01650 7d54e6f372b8563d193ef388afeac45f 560 SUPERFAMILY SSF53850 42 544 1.4E-107 T 14-10-2018 JV59_18510 77e47709d216a0138c620ac2308fe258 114 Gene3D G3DSA:3.20.160.10 1 113 5.0E-52 T 14-10-2018 IPR038604 Type III effector HopJ superfamily JV59_18510 77e47709d216a0138c620ac2308fe258 114 Pfam PF08888 HopJ type III effector protein 4 111 1.4E-50 T 14-10-2018 IPR014984 HopJ type III effector protein JV59_35650 212da6d17582697f06b42b737d256eb9 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 335 2.6E-150 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JV59_35650 212da6d17582697f06b42b737d256eb9 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 338 1.3E-39 T 14-10-2018 IPR010918 PurM-like, C-terminal domain JV59_35650 212da6d17582697f06b42b737d256eb9 346 SUPERFAMILY SSF56042 172 339 1.94E-62 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JV59_35650 212da6d17582697f06b42b737d256eb9 346 Gene3D G3DSA:3.90.650.10 172 346 3.6E-73 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JV59_35650 212da6d17582697f06b42b737d256eb9 346 SUPERFAMILY SSF55326 8 171 1.36E-53 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JV59_35650 212da6d17582697f06b42b737d256eb9 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.5 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JV59_35650 212da6d17582697f06b42b737d256eb9 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 165 2.6E-15 T 14-10-2018 IPR016188 PurM-like, N-terminal domain JV59_35650 212da6d17582697f06b42b737d256eb9 346 Gene3D G3DSA:3.30.1330.10 7 171 2.2E-69 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JV59_38735 824ed7aae9835f8970f1a9e3f406eb60 298 Gene3D G3DSA:3.30.1150.10 59 298 4.3E-25 T 14-10-2018 JV59_38735 824ed7aae9835f8970f1a9e3f406eb60 298 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 220 297 1.3E-18 T 14-10-2018 IPR006260 TonB/TolA, C-terminal JV59_38735 824ed7aae9835f8970f1a9e3f406eb60 298 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 219 296 2.4E-16 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 JV59_38735 824ed7aae9835f8970f1a9e3f406eb60 298 SUPERFAMILY SSF74653 129 296 2.49E-21 T 14-10-2018 JV59_26795 81faca8ef825386bfd935a531b5053fe 84 Pfam PF04400 (Na+)-NQR maturation NqrM 22 62 6.1E-21 T 14-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM JV59_01340 ebaa3e043ab95f3d1c529ec0c93ec4e3 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 4.1E-68 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 JV59_01340 ebaa3e043ab95f3d1c529ec0c93ec4e3 159 SUPERFAMILY SSF69765 1 157 1.57E-65 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 JV59_01340 ebaa3e043ab95f3d1c529ec0c93ec4e3 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 JV59_01340 ebaa3e043ab95f3d1c529ec0c93ec4e3 159 Pfam PF02542 YgbB family 2 155 1.9E-64 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 JV59_01340 ebaa3e043ab95f3d1c529ec0c93ec4e3 159 Gene3D G3DSA:3.30.1330.50 1 159 7.0E-69 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 JV59_01340 ebaa3e043ab95f3d1c529ec0c93ec4e3 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 35.71 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 JV59_38970 d2eab2d31ac655df7677f2eb7d64ebf0 467 Pfam PF02954 Bacterial regulatory protein, Fis family 426 466 1.6E-16 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_38970 d2eab2d31ac655df7677f2eb7d64ebf0 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site JV59_38970 d2eab2d31ac655df7677f2eb7d64ebf0 467 SUPERFAMILY SSF52540 141 385 9.35E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_38970 d2eab2d31ac655df7677f2eb7d64ebf0 467 Gene3D G3DSA:1.10.8.60 313 380 8.0E-18 T 14-10-2018 JV59_38970 d2eab2d31ac655df7677f2eb7d64ebf0 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 8.1E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_38970 d2eab2d31ac655df7677f2eb7d64ebf0 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 467 8.1E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_38970 d2eab2d31ac655df7677f2eb7d64ebf0 467 SMART SM00382 162 316 1.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_38970 d2eab2d31ac655df7677f2eb7d64ebf0 467 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 3.4E-240 T 14-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 JV59_38970 d2eab2d31ac655df7677f2eb7d64ebf0 467 Gene3D G3DSA:3.40.50.300 127 312 5.3E-67 T 14-10-2018 JV59_38970 d2eab2d31ac655df7677f2eb7d64ebf0 467 Gene3D G3DSA:3.40.50.2300 1 124 1.4E-40 T 14-10-2018 JV59_38970 d2eab2d31ac655df7677f2eb7d64ebf0 467 SMART SM00448 4 115 8.4E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_38970 d2eab2d31ac655df7677f2eb7d64ebf0 467 Gene3D G3DSA:1.10.10.60 381 467 1.0E-26 T 14-10-2018 JV59_38970 d2eab2d31ac655df7677f2eb7d64ebf0 467 SUPERFAMILY SSF52172 2 187 1.71E-42 T 14-10-2018 IPR011006 CheY-like superfamily JV59_38970 d2eab2d31ac655df7677f2eb7d64ebf0 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JV59_38970 d2eab2d31ac655df7677f2eb7d64ebf0 467 SUPERFAMILY SSF46689 382 466 5.02E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_38970 d2eab2d31ac655df7677f2eb7d64ebf0 467 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JV59_38970 d2eab2d31ac655df7677f2eb7d64ebf0 467 Pfam PF00158 Sigma-54 interaction domain 142 308 4.3E-71 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JV59_38970 d2eab2d31ac655df7677f2eb7d64ebf0 467 Pfam PF00072 Response regulator receiver domain 6 115 8.5E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_23680 f62a4c6667d8382d90ba07dd2a23cbee 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 1.6E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_23680 f62a4c6667d8382d90ba07dd2a23cbee 223 SUPERFAMILY SSF52172 1 118 6.4E-36 T 14-10-2018 IPR011006 CheY-like superfamily JV59_23680 f62a4c6667d8382d90ba07dd2a23cbee 223 SMART SM00862 146 221 2.0E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_23680 f62a4c6667d8382d90ba07dd2a23cbee 223 SUPERFAMILY SSF46894 122 221 1.81E-28 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_23680 f62a4c6667d8382d90ba07dd2a23cbee 223 Gene3D G3DSA:3.40.50.2300 1 121 1.1E-34 T 14-10-2018 JV59_23680 f62a4c6667d8382d90ba07dd2a23cbee 223 Gene3D G3DSA:1.10.10.10 122 222 1.9E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_23680 f62a4c6667d8382d90ba07dd2a23cbee 223 Pfam PF00072 Response regulator receiver domain 4 112 1.3E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_23680 f62a4c6667d8382d90ba07dd2a23cbee 223 SMART SM00448 1 112 4.3E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_26575 855d5965e91316b32d072b5b38a1b50b 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 18.564 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 JV59_26575 855d5965e91316b32d072b5b38a1b50b 64 Gene3D G3DSA:3.30.50.10 1 64 1.3E-24 T 14-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 JV59_26575 855d5965e91316b32d072b5b38a1b50b 64 SUPERFAMILY SSF57716 2 62 3.85E-21 T 14-10-2018 JV59_26575 855d5965e91316b32d072b5b38a1b50b 64 Pfam PF03884 DNA gyrase inhibitor YacG 7 57 3.0E-24 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 JV59_35435 2e8e7e01ee52ebb8154244ed2a620ae1 254 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site JV59_35435 2e8e7e01ee52ebb8154244ed2a620ae1 254 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 212 2.5E-21 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel JV59_33205 9a9c79e38cfaf7f0d66dbdc130c4e5c7 314 SUPERFAMILY SSF55174 4 96 2.19E-12 T 14-10-2018 JV59_33205 9a9c79e38cfaf7f0d66dbdc130c4e5c7 314 Gene3D G3DSA:3.10.290.10 1 59 2.6E-20 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 JV59_33205 9a9c79e38cfaf7f0d66dbdc130c4e5c7 314 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 JV59_33205 9a9c79e38cfaf7f0d66dbdc130c4e5c7 314 Gene3D G3DSA:3.30.70.580 70 228 3.2E-48 T 14-10-2018 JV59_33205 9a9c79e38cfaf7f0d66dbdc130c4e5c7 314 Pfam PF01479 S4 domain 4 45 6.6E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_33205 9a9c79e38cfaf7f0d66dbdc130c4e5c7 314 Pfam PF00849 RNA pseudouridylate synthase 68 157 8.6E-17 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_33205 9a9c79e38cfaf7f0d66dbdc130c4e5c7 314 SUPERFAMILY SSF55120 68 237 1.64E-42 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_33205 9a9c79e38cfaf7f0d66dbdc130c4e5c7 314 Gene3D G3DSA:3.30.70.1560 130 220 3.2E-48 T 14-10-2018 JV59_33205 9a9c79e38cfaf7f0d66dbdc130c4e5c7 314 SMART SM00363 3 73 2.7E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_33205 9a9c79e38cfaf7f0d66dbdc130c4e5c7 314 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 1.2E-53 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 JV59_37805 e8b2fa34d117e41896678b4dde01c2be 118 SUPERFAMILY SSF46946 2 114 4.42E-45 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 JV59_37805 e8b2fa34d117e41896678b4dde01c2be 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.7E-53 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_37805 e8b2fa34d117e41896678b4dde01c2be 118 Gene3D G3DSA:4.10.910.10 72 118 1.3E-26 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37805 e8b2fa34d117e41896678b4dde01c2be 118 PIRSF PIRSF002134 1 118 4.1E-41 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37805 e8b2fa34d117e41896678b4dde01c2be 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.4E-32 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37805 e8b2fa34d117e41896678b4dde01c2be 118 Gene3D G3DSA:1.10.8.50 1 71 5.4E-28 T 14-10-2018 JV59_37805 e8b2fa34d117e41896678b4dde01c2be 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37805 e8b2fa34d117e41896678b4dde01c2be 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.075 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_33980 d2882ac0f66177da9452f10f7b4c71b5 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 326 2.3E-25 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JV59_33980 d2882ac0f66177da9452f10f7b4c71b5 330 SUPERFAMILY SSF52540 11 261 2.4E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_33980 d2882ac0f66177da9452f10f7b4c71b5 330 Gene3D G3DSA:3.40.50.300 6 330 2.4E-97 T 14-10-2018 JV59_33980 d2882ac0f66177da9452f10f7b4c71b5 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 308 1.7E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JV59_33980 d2882ac0f66177da9452f10f7b4c71b5 330 SMART SM00382 46 239 1.6E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_33980 d2882ac0f66177da9452f10f7b4c71b5 330 Pfam PF00005 ABC transporter 38 189 1.2E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_33980 d2882ac0f66177da9452f10f7b4c71b5 330 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_25505 56967fb61d9b835ac4fb144701f0c305 556 SUPERFAMILY SSF53850 123 552 2.28E-32 T 14-10-2018 JV59_25505 56967fb61d9b835ac4fb144701f0c305 556 Pfam PF12793 Sugar transport-related sRNA regulator N-term 12 114 1.1E-14 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain JV59_25505 56967fb61d9b835ac4fb144701f0c305 556 Gene3D G3DSA:3.40.190.10 114 346 2.4E-21 T 14-10-2018 JV59_25505 56967fb61d9b835ac4fb144701f0c305 556 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 180 309 8.1E-11 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain JV59_21110 160309d996d31fadf9ddfe1e3b5b8313 649 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 5 646 8.4E-204 T 14-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 JV59_21110 160309d996d31fadf9ddfe1e3b5b8313 649 SMART SM00642 131 537 1.1E-4 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_21110 160309d996d31fadf9ddfe1e3b5b8313 649 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 8 85 4.3E-11 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 JV59_21110 160309d996d31fadf9ddfe1e3b5b8313 649 SUPERFAMILY SSF51011 554 648 1.94E-13 T 14-10-2018 JV59_21110 160309d996d31fadf9ddfe1e3b5b8313 649 SUPERFAMILY SSF51445 110 540 4.61E-97 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_21110 160309d996d31fadf9ddfe1e3b5b8313 649 Gene3D G3DSA:2.60.40.1180 553 648 1.7E-7 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta JV59_21110 160309d996d31fadf9ddfe1e3b5b8313 649 SUPERFAMILY SSF81296 5 121 3.0E-20 T 14-10-2018 IPR014756 Immunoglobulin E-set JV59_21110 160309d996d31fadf9ddfe1e3b5b8313 649 Gene3D G3DSA:2.60.40.10 1 113 3.6E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_21110 160309d996d31fadf9ddfe1e3b5b8313 649 Gene3D G3DSA:3.20.20.80 114 547 2.7E-143 T 14-10-2018 JV59_21110 160309d996d31fadf9ddfe1e3b5b8313 649 Pfam PF00128 Alpha amylase, catalytic domain 195 256 4.4E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_31855 9d2e715e418d39d3ad74ea800870073c 863 Gene3D G3DSA:1.10.1440.20 566 622 4.3E-10 T 14-10-2018 JV59_31855 9d2e715e418d39d3ad74ea800870073c 863 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 6 862 0.0 T 14-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 JV59_31855 9d2e715e418d39d3ad74ea800870073c 863 PRINTS PR00415 Aconitase family signature 285 298 2.4E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JV59_31855 9d2e715e418d39d3ad74ea800870073c 863 PRINTS PR00415 Aconitase family signature 209 224 2.4E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JV59_31855 9d2e715e418d39d3ad74ea800870073c 863 PRINTS PR00415 Aconitase family signature 271 284 2.4E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JV59_31855 9d2e715e418d39d3ad74ea800870073c 863 PRINTS PR00415 Aconitase family signature 142 155 2.4E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JV59_31855 9d2e715e418d39d3ad74ea800870073c 863 PRINTS PR00415 Aconitase family signature 166 174 2.4E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JV59_31855 9d2e715e418d39d3ad74ea800870073c 863 PRINTS PR00415 Aconitase family signature 195 208 2.4E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JV59_31855 9d2e715e418d39d3ad74ea800870073c 863 PRINTS PR00415 Aconitase family signature 364 378 2.4E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JV59_31855 9d2e715e418d39d3ad74ea800870073c 863 PRINTS PR00415 Aconitase family signature 406 417 2.4E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JV59_31855 9d2e715e418d39d3ad74ea800870073c 863 PRINTS PR00415 Aconitase family signature 468 481 2.4E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JV59_31855 9d2e715e418d39d3ad74ea800870073c 863 SUPERFAMILY SSF52016 602 860 3.14E-67 T 14-10-2018 JV59_31855 9d2e715e418d39d3ad74ea800870073c 863 Pfam PF00330 Aconitase family (aconitate hydratase) 74 537 1.7E-146 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JV59_31855 9d2e715e418d39d3ad74ea800870073c 863 Gene3D G3DSA:3.30.499.10 363 565 9.1E-77 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 JV59_31855 9d2e715e418d39d3ad74ea800870073c 863 Gene3D G3DSA:3.20.19.10 623 861 2.8E-83 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 JV59_31855 9d2e715e418d39d3ad74ea800870073c 863 Gene3D G3DSA:3.30.499.20 14 362 3.3E-132 T 14-10-2018 JV59_31855 9d2e715e418d39d3ad74ea800870073c 863 SUPERFAMILY SSF53732 29 598 1.57E-186 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 JV59_31855 9d2e715e418d39d3ad74ea800870073c 863 Pfam PF00694 Aconitase C-terminal domain 660 791 3.8E-30 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 JV59_31855 9d2e715e418d39d3ad74ea800870073c 863 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 35 859 5.1E-288 T 14-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 JV59_20835 9de7c5788e7f7d969db81ff04a0ca82d 413 PIRSF PIRSF016055 1 413 2.9E-183 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 JV59_20835 9de7c5788e7f7d969db81ff04a0ca82d 413 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 411 35.302 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 JV59_20835 9de7c5788e7f7d969db81ff04a0ca82d 413 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 407 1.7E-174 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 JV59_20835 9de7c5788e7f7d969db81ff04a0ca82d 413 Pfam PF03116 NQR2, RnfD, RnfE family 45 404 1.3E-102 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 JV59_34910 3be8bb16a0218f8a9b7419b7fc873452 184 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 176 1.7E-72 T 14-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 JV59_34910 3be8bb16a0218f8a9b7419b7fc873452 184 Gene3D G3DSA:3.40.30.10 19 183 2.2E-46 T 14-10-2018 JV59_34910 3be8bb16a0218f8a9b7419b7fc873452 184 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 JV59_34910 3be8bb16a0218f8a9b7419b7fc873452 184 Pfam PF08534 Redoxin 41 163 5.7E-27 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 JV59_34910 3be8bb16a0218f8a9b7419b7fc873452 184 SUPERFAMILY SSF52833 46 177 2.81E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_28075 3838430c5d9356a27218c9a19f7333d0 336 Gene3D G3DSA:3.40.190.10 120 263 2.0E-88 T 14-10-2018 JV59_28075 3838430c5d9356a27218c9a19f7333d0 336 Pfam PF16868 NMT1-like family 32 326 3.9E-109 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family JV59_28075 3838430c5d9356a27218c9a19f7333d0 336 Gene3D G3DSA:3.40.190.10 32 326 2.0E-88 T 14-10-2018 JV59_28075 3838430c5d9356a27218c9a19f7333d0 336 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 4 326 2.7E-100 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family JV59_28075 3838430c5d9356a27218c9a19f7333d0 336 SUPERFAMILY SSF53850 29 327 1.81E-64 T 14-10-2018 JV59_23290 4f28ed819aaf881daec87edcfb4544ce 294 SUPERFAMILY SSF46785 3 110 9.52E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_23290 4f28ed819aaf881daec87edcfb4544ce 294 Gene3D G3DSA:3.40.190.10 100 284 3.5E-32 T 14-10-2018 JV59_23290 4f28ed819aaf881daec87edcfb4544ce 294 SUPERFAMILY SSF53850 90 290 9.23E-27 T 14-10-2018 JV59_23290 4f28ed819aaf881daec87edcfb4544ce 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_23290 4f28ed819aaf881daec87edcfb4544ce 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_23290 4f28ed819aaf881daec87edcfb4544ce 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_23290 4f28ed819aaf881daec87edcfb4544ce 294 Gene3D G3DSA:3.40.190.10 160 259 3.5E-32 T 14-10-2018 JV59_23290 4f28ed819aaf881daec87edcfb4544ce 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.6E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_23290 4f28ed819aaf881daec87edcfb4544ce 294 Pfam PF03466 LysR substrate binding domain 90 287 3.2E-25 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_23290 4f28ed819aaf881daec87edcfb4544ce 294 Gene3D G3DSA:1.10.10.10 4 90 2.4E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_38940 e3e02d11b084a2639857f979c0b2f6e2 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 144 8.0E-62 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 JV59_38940 e3e02d11b084a2639857f979c0b2f6e2 144 SUPERFAMILY SSF69500 2 143 3.14E-52 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily JV59_38940 e3e02d11b084a2639857f979c0b2f6e2 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 2.5E-50 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 JV59_38940 e3e02d11b084a2639857f979c0b2f6e2 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 32.253 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 JV59_38940 e3e02d11b084a2639857f979c0b2f6e2 144 Gene3D G3DSA:3.50.80.10 1 144 7.2E-53 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily JV59_19895 9bc8189a249512df5bbe05ba1e6889cf 547 Gene3D G3DSA:1.25.40.10 144 340 3.5E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_19895 9bc8189a249512df5bbe05ba1e6889cf 547 SMART SM00448 11 129 9.0E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_19895 9bc8189a249512df5bbe05ba1e6889cf 547 SUPERFAMILY SSF52172 11 148 3.98E-20 T 14-10-2018 IPR011006 CheY-like superfamily JV59_19895 9bc8189a249512df5bbe05ba1e6889cf 547 Gene3D G3DSA:3.40.50.2300 5 143 5.6E-18 T 14-10-2018 JV59_19895 9bc8189a249512df5bbe05ba1e6889cf 547 Pfam PF00072 Response regulator receiver domain 13 129 8.3E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_19895 9bc8189a249512df5bbe05ba1e6889cf 547 SUPERFAMILY SSF48452 151 292 7.34E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_28390 f3b09ffcf048231a663e10ac3259e4bf 215 Pfam PF02613 Nitrate reductase delta subunit 51 182 1.3E-38 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone JV59_28390 f3b09ffcf048231a663e10ac3259e4bf 215 Gene3D G3DSA:1.20.120.1820 3 126 4.5E-40 T 14-10-2018 JV59_28390 f3b09ffcf048231a663e10ac3259e4bf 215 Hamap MF_01150 Chaperone protein TorD [torD]. 3 212 34.148 T 14-10-2018 IPR023069 Chaperone TorD JV59_28390 f3b09ffcf048231a663e10ac3259e4bf 215 SUPERFAMILY SSF89155 8 213 1.7E-51 T 14-10-2018 IPR036411 TorD-like superfamily JV59_28390 f3b09ffcf048231a663e10ac3259e4bf 215 Gene3D G3DSA:1.20.1280.20 129 214 1.4E-23 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 JV59_00100 db2c24b89911aa23a4b0fbc9d3f871b4 275 Gene3D G3DSA:3.40.50.150 7 239 7.0E-84 T 14-10-2018 JV59_00100 db2c24b89911aa23a4b0fbc9d3f871b4 275 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 3.2E-94 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JV59_00100 db2c24b89911aa23a4b0fbc9d3f871b4 275 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 2.0E-68 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JV59_00100 db2c24b89911aa23a4b0fbc9d3f871b4 275 PIRSF PIRSF000398 1 274 4.4E-74 T 14-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 JV59_00100 db2c24b89911aa23a4b0fbc9d3f871b4 275 Gene3D G3DSA:1.10.1020.10 57 156 7.0E-84 T 14-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 JV59_00100 db2c24b89911aa23a4b0fbc9d3f871b4 275 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JV59_00100 db2c24b89911aa23a4b0fbc9d3f871b4 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 7.8E-18 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JV59_00100 db2c24b89911aa23a4b0fbc9d3f871b4 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 7.8E-18 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JV59_00100 db2c24b89911aa23a4b0fbc9d3f871b4 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 7.8E-18 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JV59_00100 db2c24b89911aa23a4b0fbc9d3f871b4 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 7.8E-18 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JV59_00100 db2c24b89911aa23a4b0fbc9d3f871b4 275 SUPERFAMILY SSF53335 5 268 6.65E-76 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_38125 8c871779e6a7638c12bb4a50da3bfe41 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_38125 8c871779e6a7638c12bb4a50da3bfe41 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_38125 8c871779e6a7638c12bb4a50da3bfe41 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_38125 8c871779e6a7638c12bb4a50da3bfe41 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 5.0E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_38125 8c871779e6a7638c12bb4a50da3bfe41 211 Gene3D G3DSA:3.40.50.2300 3 132 1.5E-26 T 14-10-2018 JV59_38125 8c871779e6a7638c12bb4a50da3bfe41 211 SMART SM00448 5 119 1.0E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_38125 8c871779e6a7638c12bb4a50da3bfe41 211 SUPERFAMILY SSF52172 4 164 5.27E-26 T 14-10-2018 IPR011006 CheY-like superfamily JV59_38125 8c871779e6a7638c12bb4a50da3bfe41 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_38125 8c871779e6a7638c12bb4a50da3bfe41 211 SMART SM00421 147 204 8.0E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_38125 8c871779e6a7638c12bb4a50da3bfe41 211 Pfam PF00072 Response regulator receiver domain 7 119 6.4E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_38125 8c871779e6a7638c12bb4a50da3bfe41 211 SUPERFAMILY SSF46894 142 207 4.42E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_38125 8c871779e6a7638c12bb4a50da3bfe41 211 Gene3D G3DSA:1.10.10.10 148 211 4.8E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_28435 53421289158f557d448bf8ad02f10663 544 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 253 267 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 JV59_28435 53421289158f557d448bf8ad02f10663 544 PIRSF PIRSF000137 1 539 4.6E-150 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 JV59_28435 53421289158f557d448bf8ad02f10663 544 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 81 104 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 JV59_28435 53421289158f557d448bf8ad02f10663 544 SUPERFAMILY SSF54373 289 472 2.06E-46 T 14-10-2018 JV59_28435 53421289158f557d448bf8ad02f10663 544 Pfam PF00732 GMC oxidoreductase 4 294 8.8E-91 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 JV59_28435 53421289158f557d448bf8ad02f10663 544 Pfam PF05199 GMC oxidoreductase 387 523 7.5E-40 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 JV59_28435 53421289158f557d448bf8ad02f10663 544 Gene3D G3DSA:3.30.560.10 43 467 5.0E-182 T 14-10-2018 JV59_28435 53421289158f557d448bf8ad02f10663 544 SUPERFAMILY SSF51905 3 529 1.62E-89 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_28435 53421289158f557d448bf8ad02f10663 544 Gene3D G3DSA:3.50.50.60 4 528 5.0E-182 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_01520 42d5a82d12cfe0e51bd2c9fd30116ee2 300 SUPERFAMILY SSF52374 1 280 9.92E-105 T 14-10-2018 JV59_01520 42d5a82d12cfe0e51bd2c9fd30116ee2 300 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 1.1E-100 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 JV59_01520 42d5a82d12cfe0e51bd2c9fd30116ee2 300 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 1.7E-104 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 JV59_01520 42d5a82d12cfe0e51bd2c9fd30116ee2 300 Gene3D G3DSA:3.40.50.620 1 179 3.5E-79 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_01520 42d5a82d12cfe0e51bd2c9fd30116ee2 300 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 62 3.7E-9 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JV59_01520 42d5a82d12cfe0e51bd2c9fd30116ee2 300 Gene3D G3DSA:3.30.1300.10 180 283 3.9E-27 T 14-10-2018 JV59_01520 42d5a82d12cfe0e51bd2c9fd30116ee2 300 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.394 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 JV59_20570 e0660390b7f11cf87a5b7debea4fcdec 485 SMART SM00267 318 484 4.4E-45 T 14-10-2018 IPR000160 GGDEF domain JV59_20570 e0660390b7f11cf87a5b7debea4fcdec 485 SUPERFAMILY SSF55073 334 483 3.45E-36 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_20570 e0660390b7f11cf87a5b7debea4fcdec 485 Gene3D G3DSA:3.30.70.270 317 484 4.1E-42 T 14-10-2018 JV59_20570 e0660390b7f11cf87a5b7debea4fcdec 485 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 326 484 7.5E-35 T 14-10-2018 IPR000160 GGDEF domain JV59_20570 e0660390b7f11cf87a5b7debea4fcdec 485 Pfam PF00990 Diguanylate cyclase, GGDEF domain 329 480 6.4E-33 T 14-10-2018 IPR000160 GGDEF domain JV59_20570 e0660390b7f11cf87a5b7debea4fcdec 485 SMART SM01079 77 246 5.7E-10 T 14-10-2018 IPR006189 CHASE domain JV59_20570 e0660390b7f11cf87a5b7debea4fcdec 485 Pfam PF03924 CHASE domain 84 244 5.8E-11 T 14-10-2018 IPR006189 CHASE domain JV59_28600 67bc7934f273b77bae2f359bd03facc5 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 1.7E-107 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 JV59_28600 67bc7934f273b77bae2f359bd03facc5 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 6.9E-170 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 JV59_28600 67bc7934f273b77bae2f359bd03facc5 378 PIRSF PIRSF000267 2 377 5.8E-121 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 JV59_19690 25549665491e4c61afc016d6a93bac36 332 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 9 317 4.3E-90 T 14-10-2018 IPR010732 Type VI secretion, TssG-like JV59_19690 25549665491e4c61afc016d6a93bac36 332 Pfam PF06996 Type VI secretion, TssG 9 317 2.8E-82 T 14-10-2018 IPR010732 Type VI secretion, TssG-like JV59_26995 80693855157be15df009a096e697dc3d 269 Gene3D G3DSA:3.40.190.10 34 263 1.3E-94 T 14-10-2018 JV59_26995 80693855157be15df009a096e697dc3d 269 Pfam PF03180 NLPA lipoprotein 33 269 8.9E-99 T 14-10-2018 IPR004872 Lipoprotein NlpA family JV59_26995 80693855157be15df009a096e697dc3d 269 Gene3D G3DSA:3.40.190.10 115 219 1.3E-94 T 14-10-2018 JV59_26995 80693855157be15df009a096e697dc3d 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 4.9E-129 T 14-10-2018 IPR004872 Lipoprotein NlpA family JV59_26995 80693855157be15df009a096e697dc3d 269 SUPERFAMILY SSF53850 32 269 1.6E-79 T 14-10-2018 JV59_26995 80693855157be15df009a096e697dc3d 269 PIRSF PIRSF002854 1 269 9.0E-101 T 14-10-2018 IPR004872 Lipoprotein NlpA family JV59_35400 ab1ffaef9fee5593c7e9e13af3cebf0a 249 SMART SM00892 40 232 9.3E-63 T 14-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 JV59_35400 ab1ffaef9fee5593c7e9e13af3cebf0a 249 Gene3D G3DSA:3.40.570.10 11 244 2.0E-74 T 14-10-2018 JV59_35400 ab1ffaef9fee5593c7e9e13af3cebf0a 249 Pfam PF01223 DNA/RNA non-specific endonuclease 24 231 2.7E-56 T 14-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 JV59_35400 ab1ffaef9fee5593c7e9e13af3cebf0a 249 SUPERFAMILY SSF54060 26 240 3.3E-70 T 14-10-2018 JV59_35400 ab1ffaef9fee5593c7e9e13af3cebf0a 249 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 100 108 - T 14-10-2018 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 JV59_35400 ab1ffaef9fee5593c7e9e13af3cebf0a 249 SMART SM00477 41 232 3.1E-63 T 14-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 JV59_37015 8db59a8d71e9a6528281722756bc569f 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 387 4.2E-126 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 JV59_37015 8db59a8d71e9a6528281722756bc569f 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 JV59_37015 8db59a8d71e9a6528281722756bc569f 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 2.2E-10 T 14-10-2018 JV59_37015 8db59a8d71e9a6528281722756bc569f 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 2.2E-10 T 14-10-2018 JV59_37015 8db59a8d71e9a6528281722756bc569f 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 2.2E-10 T 14-10-2018 JV59_37015 8db59a8d71e9a6528281722756bc569f 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.2E-10 T 14-10-2018 JV59_37015 8db59a8d71e9a6528281722756bc569f 392 Pfam PF01494 FAD binding domain 4 338 1.9E-26 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 JV59_37015 8db59a8d71e9a6528281722756bc569f 392 SUPERFAMILY SSF51905 3 380 1.04E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_37015 8db59a8d71e9a6528281722756bc569f 392 Gene3D G3DSA:3.50.50.60 5 336 2.8E-100 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_37015 8db59a8d71e9a6528281722756bc569f 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 5 388 3.1E-148 T 14-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 JV59_37015 8db59a8d71e9a6528281722756bc569f 392 Gene3D G3DSA:3.30.9.50 81 270 2.8E-100 T 14-10-2018 JV59_19330 2459573e1998b3734faf975da1ba22c4 235 SUPERFAMILY SSF160467 9 99 4.97E-12 T 14-10-2018 JV59_19330 2459573e1998b3734faf975da1ba22c4 235 Gene3D G3DSA:3.30.1360.40 6 85 1.4E-8 T 14-10-2018 JV59_19330 2459573e1998b3734faf975da1ba22c4 235 Gene3D G3DSA:2.40.100.10 93 232 3.9E-46 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily JV59_19330 2459573e1998b3734faf975da1ba22c4 235 SUPERFAMILY SSF50891 94 223 1.52E-37 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily JV59_19330 2459573e1998b3734faf975da1ba22c4 235 SMART SM00796 5 207 3.5E-59 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D JV59_19330 2459573e1998b3734faf975da1ba22c4 235 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 7 204 4.2E-55 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D JV59_20330 8969c82e35fdcf26e56ed9e8c5bb9f83 642 Gene3D G3DSA:3.10.20.30 3 62 9.8E-22 T 14-10-2018 IPR012675 Beta-grasp domain superfamily JV59_20330 8969c82e35fdcf26e56ed9e8c5bb9f83 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 34.171 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JV59_20330 8969c82e35fdcf26e56ed9e8c5bb9f83 642 SUPERFAMILY SSF55186 65 242 2.22E-63 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 JV59_20330 8969c82e35fdcf26e56ed9e8c5bb9f83 642 Gene3D G3DSA:3.30.930.10 224 532 3.7E-130 T 14-10-2018 JV59_20330 8969c82e35fdcf26e56ed9e8c5bb9f83 642 Pfam PF03129 Anticodon binding domain 542 631 2.4E-23 T 14-10-2018 IPR004154 Anticodon-binding JV59_20330 8969c82e35fdcf26e56ed9e8c5bb9f83 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 3.1E-13 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 JV59_20330 8969c82e35fdcf26e56ed9e8c5bb9f83 642 Gene3D G3DSA:3.40.50.800 533 642 3.9E-32 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily JV59_20330 8969c82e35fdcf26e56ed9e8c5bb9f83 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 5.1E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JV59_20330 8969c82e35fdcf26e56ed9e8c5bb9f83 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 5.1E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JV59_20330 8969c82e35fdcf26e56ed9e8c5bb9f83 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 5.1E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JV59_20330 8969c82e35fdcf26e56ed9e8c5bb9f83 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 5.1E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JV59_20330 8969c82e35fdcf26e56ed9e8c5bb9f83 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 5.1E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JV59_20330 8969c82e35fdcf26e56ed9e8c5bb9f83 642 SUPERFAMILY SSF81271 3 61 9.16E-15 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 JV59_20330 8969c82e35fdcf26e56ed9e8c5bb9f83 642 Gene3D G3DSA:3.30.980.10 70 223 1.4E-63 T 14-10-2018 JV59_20330 8969c82e35fdcf26e56ed9e8c5bb9f83 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 2.0E-241 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JV59_20330 8969c82e35fdcf26e56ed9e8c5bb9f83 642 SUPERFAMILY SSF55681 244 527 1.38E-100 T 14-10-2018 JV59_20330 8969c82e35fdcf26e56ed9e8c5bb9f83 642 Gene3D G3DSA:3.30.54.20 131 188 1.4E-63 T 14-10-2018 JV59_20330 8969c82e35fdcf26e56ed9e8c5bb9f83 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 530 3.7E-50 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_20330 8969c82e35fdcf26e56ed9e8c5bb9f83 642 SUPERFAMILY SSF52954 531 638 4.98E-32 T 14-10-2018 JV59_20330 8969c82e35fdcf26e56ed9e8c5bb9f83 642 SMART SM00863 171 220 1.5E-18 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 JV59_20330 8969c82e35fdcf26e56ed9e8c5bb9f83 642 Pfam PF02824 TGS domain 4 61 2.9E-10 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 JV59_16025 92e866543aca44b8590d8e073caab7ca 336 Pfam PF01965 DJ-1/PfpI family 47 182 2.1E-12 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 JV59_16025 92e866543aca44b8590d8e073caab7ca 336 SUPERFAMILY SSF52317 8 200 3.54E-35 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_16025 92e866543aca44b8590d8e073caab7ca 336 SUPERFAMILY SSF46689 218 270 2.69E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_16025 92e866543aca44b8590d8e073caab7ca 336 Gene3D G3DSA:3.40.50.880 4 208 3.6E-38 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_16025 92e866543aca44b8590d8e073caab7ca 336 SMART SM00342 236 319 7.6E-13 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_16025 92e866543aca44b8590d8e073caab7ca 336 Pfam PF12833 Helix-turn-helix domain 242 319 2.7E-14 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_16025 92e866543aca44b8590d8e073caab7ca 336 Gene3D G3DSA:1.10.10.60 217 324 6.0E-20 T 14-10-2018 JV59_24035 e11ccbb8c81f66be3af65611fc08783b 704 SUPERFAMILY SSF90123 142 452 2.22E-50 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_24035 e11ccbb8c81f66be3af65611fc08783b 704 Gene3D G3DSA:1.20.1560.10 142 454 2.6E-57 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_24035 e11ccbb8c81f66be3af65611fc08783b 704 Pfam PF00664 ABC transporter transmembrane region 158 420 4.4E-23 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JV59_24035 e11ccbb8c81f66be3af65611fc08783b 704 ProSitePatterns PS00211 ABC transporters family signature. 607 621 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_24035 e11ccbb8c81f66be3af65611fc08783b 704 Gene3D G3DSA:3.90.70.10 1 126 2.8E-36 T 14-10-2018 JV59_24035 e11ccbb8c81f66be3af65611fc08783b 704 Gene3D G3DSA:3.40.50.300 461 703 3.4E-73 T 14-10-2018 JV59_24035 e11ccbb8c81f66be3af65611fc08783b 704 SMART SM00382 495 681 1.5E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_24035 e11ccbb8c81f66be3af65611fc08783b 704 SUPERFAMILY SSF52540 459 693 4.76E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_24035 e11ccbb8c81f66be3af65611fc08783b 704 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 3 698 1.6E-290 T 14-10-2018 IPR017750 ATPase, type I secretion system JV59_24035 e11ccbb8c81f66be3af65611fc08783b 704 Pfam PF00005 ABC transporter 487 635 3.7E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_00040 d8e318675051ab9dee95a307a3460750 485 Gene3D G3DSA:3.50.50.60 147 270 1.1E-97 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_00040 d8e318675051ab9dee95a307a3460750 485 PIRSF PIRSF000350 1 468 2.2E-62 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 JV59_00040 d8e318675051ab9dee95a307a3460750 485 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 351 460 4.4E-16 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 JV59_00040 d8e318675051ab9dee95a307a3460750 485 Gene3D G3DSA:3.50.50.60 7 331 1.1E-97 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_00040 d8e318675051ab9dee95a307a3460750 485 Gene3D G3DSA:1.10.287.990 37 107 1.1E-97 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_00040 d8e318675051ab9dee95a307a3460750 485 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 328 5.1E-45 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JV59_00040 d8e318675051ab9dee95a307a3460750 485 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 2.3E-20 T 14-10-2018 JV59_00040 d8e318675051ab9dee95a307a3460750 485 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 2.3E-20 T 14-10-2018 JV59_00040 d8e318675051ab9dee95a307a3460750 485 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 2.3E-20 T 14-10-2018 JV59_00040 d8e318675051ab9dee95a307a3460750 485 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.3E-20 T 14-10-2018 JV59_00040 d8e318675051ab9dee95a307a3460750 485 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 2.3E-20 T 14-10-2018 JV59_00040 d8e318675051ab9dee95a307a3460750 485 SUPERFAMILY SSF51905 1 367 6.48E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_00040 d8e318675051ab9dee95a307a3460750 485 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 1.8E-41 T 14-10-2018 JV59_00040 d8e318675051ab9dee95a307a3460750 485 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.8E-41 T 14-10-2018 JV59_00040 d8e318675051ab9dee95a307a3460750 485 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 1.8E-41 T 14-10-2018 JV59_00040 d8e318675051ab9dee95a307a3460750 485 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 428 1.8E-41 T 14-10-2018 JV59_00040 d8e318675051ab9dee95a307a3460750 485 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 455 1.8E-41 T 14-10-2018 JV59_00040 d8e318675051ab9dee95a307a3460750 485 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 1.8E-41 T 14-10-2018 JV59_00040 d8e318675051ab9dee95a307a3460750 485 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 1.8E-41 T 14-10-2018 JV59_00040 d8e318675051ab9dee95a307a3460750 485 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 1.8E-41 T 14-10-2018 JV59_00040 d8e318675051ab9dee95a307a3460750 485 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 345 366 1.8E-41 T 14-10-2018 JV59_00040 d8e318675051ab9dee95a307a3460750 485 SUPERFAMILY SSF55424 350 468 1.89E-24 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JV59_00040 d8e318675051ab9dee95a307a3460750 485 Gene3D G3DSA:3.30.390.30 348 471 1.1E-41 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JV59_36780 2e43ed2f8e4e3b408c01ff7b14cdd962 274 Gene3D G3DSA:3.40.50.1980 22 139 4.0E-34 T 14-10-2018 JV59_36780 2e43ed2f8e4e3b408c01ff7b14cdd962 274 Pfam PF01497 Periplasmic binding protein 25 246 5.7E-25 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain JV59_36780 2e43ed2f8e4e3b408c01ff7b14cdd962 274 Gene3D G3DSA:3.40.50.1980 142 270 4.4E-28 T 14-10-2018 JV59_36780 2e43ed2f8e4e3b408c01ff7b14cdd962 274 SUPERFAMILY SSF53807 21 267 6.28E-56 T 14-10-2018 JV59_36780 2e43ed2f8e4e3b408c01ff7b14cdd962 274 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 3 271 49.346 T 14-10-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 JV59_37395 272447f6fcb94448ca195e7caad7454c 145 PIRSF PIRSF006276 1 145 2.1E-19 T 14-10-2018 IPR006015 Universal stress protein A JV59_37395 272447f6fcb94448ca195e7caad7454c 145 Gene3D G3DSA:3.40.50.620 1 142 2.0E-36 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_37395 272447f6fcb94448ca195e7caad7454c 145 Pfam PF00582 Universal stress protein family 1 142 3.1E-33 T 14-10-2018 IPR006016 UspA JV59_37395 272447f6fcb94448ca195e7caad7454c 145 PRINTS PR01438 Universal stress protein signature 102 114 3.5E-12 T 14-10-2018 IPR006015 Universal stress protein A JV59_37395 272447f6fcb94448ca195e7caad7454c 145 PRINTS PR01438 Universal stress protein signature 2 20 3.5E-12 T 14-10-2018 IPR006015 Universal stress protein A JV59_37395 272447f6fcb94448ca195e7caad7454c 145 PRINTS PR01438 Universal stress protein signature 120 142 3.5E-12 T 14-10-2018 IPR006015 Universal stress protein A JV59_37395 272447f6fcb94448ca195e7caad7454c 145 SUPERFAMILY SSF52402 2 143 6.53E-35 T 14-10-2018 JV59_05500 ba120b06a2004b86cc49cf0d77130964 319 Pfam PF13377 Periplasmic binding protein-like domain 157 317 2.0E-31 T 14-10-2018 JV59_05500 ba120b06a2004b86cc49cf0d77130964 319 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 39 5.5E-9 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_05500 ba120b06a2004b86cc49cf0d77130964 319 Gene3D G3DSA:1.10.260.40 1 45 1.1E-15 T 14-10-2018 JV59_05500 ba120b06a2004b86cc49cf0d77130964 319 Gene3D G3DSA:3.40.50.2300 149 276 5.5E-57 T 14-10-2018 JV59_05500 ba120b06a2004b86cc49cf0d77130964 319 SUPERFAMILY SSF53822 53 318 2.54E-51 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_05500 ba120b06a2004b86cc49cf0d77130964 319 SMART SM00354 1 62 1.9E-9 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_05500 ba120b06a2004b86cc49cf0d77130964 319 Gene3D G3DSA:3.40.50.2300 46 293 5.5E-57 T 14-10-2018 JV59_05500 ba120b06a2004b86cc49cf0d77130964 319 SUPERFAMILY SSF47413 2 50 5.34E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_23495 15d4665dd1bcc35a94a0f92435738626 319 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 163 317 6.5E-35 T 14-10-2018 IPR000160 GGDEF domain JV59_23495 15d4665dd1bcc35a94a0f92435738626 319 Gene3D G3DSA:3.30.450.40 11 162 1.5E-17 T 14-10-2018 IPR029016 GAF-like domain superfamily JV59_23495 15d4665dd1bcc35a94a0f92435738626 319 Pfam PF00990 Diguanylate cyclase, GGDEF domain 164 317 1.4E-38 T 14-10-2018 IPR000160 GGDEF domain JV59_23495 15d4665dd1bcc35a94a0f92435738626 319 SMART SM00065 26 168 2.1E-13 T 14-10-2018 IPR003018 GAF domain GO:0005515 JV59_23495 15d4665dd1bcc35a94a0f92435738626 319 Gene3D G3DSA:3.30.70.270 163 319 2.4E-43 T 14-10-2018 JV59_23495 15d4665dd1bcc35a94a0f92435738626 319 SUPERFAMILY SSF55073 169 317 3.45E-38 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_23495 15d4665dd1bcc35a94a0f92435738626 319 Pfam PF01590 GAF domain 27 157 5.6E-11 T 14-10-2018 IPR003018 GAF domain GO:0005515 JV59_23495 15d4665dd1bcc35a94a0f92435738626 319 SUPERFAMILY SSF55781 27 159 1.25E-25 T 14-10-2018 JV59_23495 15d4665dd1bcc35a94a0f92435738626 319 SMART SM00267 151 319 1.4E-38 T 14-10-2018 IPR000160 GGDEF domain JV59_30850 29f76b4f79ab26a518448f243ed1a207 675 Pfam PF17202 Single cache domain 3 201 313 1.6E-26 T 14-10-2018 IPR033463 Single cache domain 3 JV59_30850 29f76b4f79ab26a518448f243ed1a207 675 Pfam PF00512 His Kinase A (phospho-acceptor) domain 445 510 7.9E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_30850 29f76b4f79ab26a518448f243ed1a207 675 PRINTS PR00344 Bacterial sensor protein C-terminal signature 615 625 6.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_30850 29f76b4f79ab26a518448f243ed1a207 675 PRINTS PR00344 Bacterial sensor protein C-terminal signature 626 644 6.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_30850 29f76b4f79ab26a518448f243ed1a207 675 PRINTS PR00344 Bacterial sensor protein C-terminal signature 650 663 6.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_30850 29f76b4f79ab26a518448f243ed1a207 675 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 611 6.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_30850 29f76b4f79ab26a518448f243ed1a207 675 Gene3D G3DSA:1.10.287.130 437 510 8.2E-22 T 14-10-2018 JV59_30850 29f76b4f79ab26a518448f243ed1a207 675 SUPERFAMILY SSF103190 149 306 8.32E-12 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JV59_30850 29f76b4f79ab26a518448f243ed1a207 675 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 559 664 2.5E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_30850 29f76b4f79ab26a518448f243ed1a207 675 SMART SM00388 445 512 2.6E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_30850 29f76b4f79ab26a518448f243ed1a207 675 SUPERFAMILY SSF55874 502 664 1.57E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_30850 29f76b4f79ab26a518448f243ed1a207 675 SMART SM00387 555 666 1.9E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_30850 29f76b4f79ab26a518448f243ed1a207 675 SUPERFAMILY SSF47384 439 509 2.94E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_30850 29f76b4f79ab26a518448f243ed1a207 675 Gene3D G3DSA:3.30.565.10 516 671 1.6E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_37090 54756617cc824a9525028c64e88cfd3e 515 Gene3D G3DSA:3.30.160.270 394 500 6.7E-8 T 14-10-2018 JV59_37090 54756617cc824a9525028c64e88cfd3e 515 SUPERFAMILY SSF51569 1 291 9.52E-101 T 14-10-2018 JV59_37090 54756617cc824a9525028c64e88cfd3e 515 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.407 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 JV59_37090 54756617cc824a9525028c64e88cfd3e 515 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 JV59_37090 54756617cc824a9525028c64e88cfd3e 515 SUPERFAMILY SSF110921 393 498 2.62E-21 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 JV59_37090 54756617cc824a9525028c64e88cfd3e 515 Pfam PF00682 HMGL-like 4 273 4.8E-101 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 JV59_37090 54756617cc824a9525028c64e88cfd3e 515 Gene3D G3DSA:3.20.20.70 1 277 2.8E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_37090 54756617cc824a9525028c64e88cfd3e 515 Gene3D G3DSA:1.10.238.260 280 393 4.9E-32 T 14-10-2018 JV59_37090 54756617cc824a9525028c64e88cfd3e 515 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 1.3E-30 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 JV59_37090 54756617cc824a9525028c64e88cfd3e 515 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 JV59_37090 54756617cc824a9525028c64e88cfd3e 515 SMART SM00917 369 499 2.4E-29 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 JV59_37090 54756617cc824a9525028c64e88cfd3e 515 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 3.6E-237 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 JV59_36665 042404debee4fe3010ae8b415113c8e3 520 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 5 476 19.772 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JV59_36665 042404debee4fe3010ae8b415113c8e3 520 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 511 9.2E-136 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JV59_36665 042404debee4fe3010ae8b415113c8e3 520 PRINTS PR01806 Virulence factor MviN signature 54 70 3.9E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JV59_36665 042404debee4fe3010ae8b415113c8e3 520 PRINTS PR01806 Virulence factor MviN signature 418 435 3.9E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JV59_36665 042404debee4fe3010ae8b415113c8e3 520 PRINTS PR01806 Virulence factor MviN signature 35 54 3.9E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JV59_36665 042404debee4fe3010ae8b415113c8e3 520 PRINTS PR01806 Virulence factor MviN signature 268 294 3.9E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JV59_36665 042404debee4fe3010ae8b415113c8e3 520 PRINTS PR01806 Virulence factor MviN signature 166 187 3.9E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JV59_36665 042404debee4fe3010ae8b415113c8e3 520 PRINTS PR01806 Virulence factor MviN signature 142 166 3.9E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JV59_36665 042404debee4fe3010ae8b415113c8e3 520 PRINTS PR01806 Virulence factor MviN signature 366 385 3.9E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JV59_36665 042404debee4fe3010ae8b415113c8e3 520 Pfam PF03023 MviN-like protein 30 487 7.5E-144 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JV59_36665 042404debee4fe3010ae8b415113c8e3 520 PIRSF PIRSF002869 1 518 2.3E-148 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JV59_31775 e88739751bc0c95269d225c09c6eb351 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_31775 e88739751bc0c95269d225c09c6eb351 249 SMART SM00382 33 220 2.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_31775 e88739751bc0c95269d225c09c6eb351 249 Pfam PF00005 ABC transporter 24 172 8.7E-39 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_31775 e88739751bc0c95269d225c09c6eb351 249 SUPERFAMILY SSF52540 8 242 1.04E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_31775 e88739751bc0c95269d225c09c6eb351 249 PIRSF PIRSF039085 5 248 5.6E-110 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 JV59_31775 e88739751bc0c95269d225c09c6eb351 249 Gene3D G3DSA:3.40.50.300 6 249 6.3E-79 T 14-10-2018 JV59_20590 23de274105d59aab57c6152d9a2b77e3 146 SUPERFAMILY SSF55729 3 137 4.53E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_20590 23de274105d59aab57c6152d9a2b77e3 146 Gene3D G3DSA:3.40.630.30 1 144 6.7E-16 T 14-10-2018 JV59_20590 23de274105d59aab57c6152d9a2b77e3 146 Pfam PF13673 Acetyltransferase (GNAT) domain 33 134 3.3E-10 T 14-10-2018 IPR000182 GNAT domain JV59_38265 512d8f717f9731e76d0f29d547e4c14b 155 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 11 146 2.0E-58 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 JV59_38265 512d8f717f9731e76d0f29d547e4c14b 155 Pfam PF02556 Preprotein translocase subunit SecB 7 146 2.3E-55 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 JV59_38265 512d8f717f9731e76d0f29d547e4c14b 155 Gene3D G3DSA:3.10.420.10 3 154 1.3E-57 T 14-10-2018 IPR035958 SecB-like superfamily JV59_38265 512d8f717f9731e76d0f29d547e4c14b 155 SUPERFAMILY SSF54611 4 143 9.59E-52 T 14-10-2018 IPR035958 SecB-like superfamily JV59_38265 512d8f717f9731e76d0f29d547e4c14b 155 Hamap MF_00821 Protein-export protein SecB [secB]. 1 147 32.04 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 JV59_38265 512d8f717f9731e76d0f29d547e4c14b 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 125 143 1.4E-38 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 JV59_38265 512d8f717f9731e76d0f29d547e4c14b 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 75 95 1.4E-38 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 JV59_38265 512d8f717f9731e76d0f29d547e4c14b 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 15 32 1.4E-38 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 JV59_38265 512d8f717f9731e76d0f29d547e4c14b 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 99 121 1.4E-38 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 JV59_28410 6793ac080cc1ebb633e95530d5c43b8a 445 Gene3D G3DSA:1.10.225.40 358 445 1.8E-37 T 14-10-2018 IPR038198 MukF, C-terminal domain superfamily JV59_28410 6793ac080cc1ebb633e95530d5c43b8a 445 Pfam PF03882 MukF winged-helix domain 10 122 3.4E-54 T 14-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain JV59_28410 6793ac080cc1ebb633e95530d5c43b8a 445 Pfam PF17192 MukF middle domain 126 286 1.4E-77 T 14-10-2018 IPR033440 Chromosome partition protein MukF, middle domain JV59_28410 6793ac080cc1ebb633e95530d5c43b8a 445 Pfam PF17193 MukF C-terminal domain 288 445 4.5E-78 T 14-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain JV59_28410 6793ac080cc1ebb633e95530d5c43b8a 445 SUPERFAMILY SSF140570 124 286 7.85E-76 T 14-10-2018 IPR036141 MukF, middle domain superfamily JV59_28410 6793ac080cc1ebb633e95530d5c43b8a 445 Gene3D G3DSA:1.20.58.590 124 316 2.4E-80 T 14-10-2018 IPR036141 MukF, middle domain superfamily JV59_28410 6793ac080cc1ebb633e95530d5c43b8a 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 54.721 T 14-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 JV59_28410 6793ac080cc1ebb633e95530d5c43b8a 445 Gene3D G3DSA:1.10.10.10 29 123 2.0E-46 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_28410 6793ac080cc1ebb633e95530d5c43b8a 445 SUPERFAMILY SSF46785 13 123 5.44E-45 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_28410 6793ac080cc1ebb633e95530d5c43b8a 445 PIRSF PIRSF018282 1 445 1.9E-248 T 14-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 JV59_25605 3e85abaf5e8ee1f6b57a9ac4ecc6733e 306 SUPERFAMILY SSF53850 88 292 1.68E-38 T 14-10-2018 JV59_25605 3e85abaf5e8ee1f6b57a9ac4ecc6733e 306 Pfam PF03466 LysR substrate binding domain 88 285 2.3E-39 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_25605 3e85abaf5e8ee1f6b57a9ac4ecc6733e 306 Gene3D G3DSA:1.10.10.10 1 87 1.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_25605 3e85abaf5e8ee1f6b57a9ac4ecc6733e 306 SUPERFAMILY SSF46785 3 108 1.28E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_25605 3e85abaf5e8ee1f6b57a9ac4ecc6733e 306 Gene3D G3DSA:3.40.190.290 89 289 2.8E-49 T 14-10-2018 JV59_25605 3e85abaf5e8ee1f6b57a9ac4ecc6733e 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 60 1.6E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_31760 4d711f9a819d35fb99921c567c10d269 342 Gene3D G3DSA:3.40.190.10 28 257 1.7E-50 T 14-10-2018 JV59_31760 4d711f9a819d35fb99921c567c10d269 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 5.0E-29 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_31760 4d711f9a819d35fb99921c567c10d269 342 SUPERFAMILY SSF53850 29 258 3.3E-48 T 14-10-2018 JV59_31760 4d711f9a819d35fb99921c567c10d269 342 SMART SM00062 38 267 1.3E-53 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_31760 4d711f9a819d35fb99921c567c10d269 342 Gene3D G3DSA:3.40.190.10 130 225 1.7E-50 T 14-10-2018 JV59_33080 59096a5bd4b62b8de2296233f651b77c 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 1.1E-205 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 JV59_33080 59096a5bd4b62b8de2296233f651b77c 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 7.7E-12 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 JV59_33080 59096a5bd4b62b8de2296233f651b77c 466 SUPERFAMILY SSF50249 15 101 1.39E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_33080 59096a5bd4b62b8de2296233f651b77c 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 9.8E-81 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_33080 59096a5bd4b62b8de2296233f651b77c 466 Gene3D G3DSA:3.30.930.10 109 465 1.1E-108 T 14-10-2018 JV59_33080 59096a5bd4b62b8de2296233f651b77c 466 SUPERFAMILY SSF55681 97 464 3.78E-95 T 14-10-2018 JV59_33080 59096a5bd4b62b8de2296233f651b77c 466 Gene3D G3DSA:2.40.50.140 3 105 3.1E-20 T 14-10-2018 JV59_33080 59096a5bd4b62b8de2296233f651b77c 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.916 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 JV59_33080 59096a5bd4b62b8de2296233f651b77c 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 3.2E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_33080 59096a5bd4b62b8de2296233f651b77c 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 3.2E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_33080 59096a5bd4b62b8de2296233f651b77c 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 3.2E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_33080 59096a5bd4b62b8de2296233f651b77c 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 3.2E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_02045 f5a9a614f83e28f8fa92b07b5386e84e 439 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 438 32.814 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JV59_02045 f5a9a614f83e28f8fa92b07b5386e84e 439 SUPERFAMILY SSF53623 98 299 8.11E-54 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JV59_02045 f5a9a614f83e28f8fa92b07b5386e84e 439 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 10 436 2.8E-132 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JV59_02045 f5a9a614f83e28f8fa92b07b5386e84e 439 SUPERFAMILY SSF51984 9 97 5.36E-16 T 14-10-2018 JV59_02045 f5a9a614f83e28f8fa92b07b5386e84e 439 Pfam PF08245 Mur ligase middle domain 113 281 1.2E-30 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 JV59_02045 f5a9a614f83e28f8fa92b07b5386e84e 439 SUPERFAMILY SSF53244 301 437 8.55E-43 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JV59_02045 f5a9a614f83e28f8fa92b07b5386e84e 439 Gene3D G3DSA:3.40.50.720 5 96 5.2E-19 T 14-10-2018 JV59_02045 f5a9a614f83e28f8fa92b07b5386e84e 439 Pfam PF02875 Mur ligase family, glutamate ligase domain 304 373 1.2E-7 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 JV59_02045 f5a9a614f83e28f8fa92b07b5386e84e 439 Gene3D G3DSA:3.90.190.20 302 435 1.0E-40 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JV59_02045 f5a9a614f83e28f8fa92b07b5386e84e 439 Gene3D G3DSA:3.40.1190.10 97 301 2.6E-65 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JV59_34420 784401a4e613414fc152fe871ce3d48e 405 Gene3D G3DSA:3.30.420.40 91 387 1.2E-111 T 14-10-2018 JV59_34420 784401a4e613414fc152fe871ce3d48e 405 Gene3D G3DSA:3.30.420.40 208 377 1.2E-111 T 14-10-2018 JV59_34420 784401a4e613414fc152fe871ce3d48e 405 ProSitePatterns PS01125 ROK family signature. 218 245 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 JV59_34420 784401a4e613414fc152fe871ce3d48e 405 SUPERFAMILY SSF46785 10 76 2.07E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_34420 784401a4e613414fc152fe871ce3d48e 405 Gene3D G3DSA:1.10.10.10 2 81 1.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_34420 784401a4e613414fc152fe871ce3d48e 405 SUPERFAMILY SSF53067 86 393 4.8E-56 T 14-10-2018 JV59_34420 784401a4e613414fc152fe871ce3d48e 405 Pfam PF00480 ROK family 88 390 8.3E-69 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 JV59_17095 079c413bab37ff68abeb3b5bde280a93 197 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 19 194 2.5E-33 T 14-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like JV59_17095 079c413bab37ff68abeb3b5bde280a93 197 SUPERFAMILY SSF51197 3 196 4.94E-66 T 14-10-2018 JV59_17095 079c413bab37ff68abeb3b5bde280a93 197 Gene3D G3DSA:2.60.120.590 9 197 9.9E-67 T 14-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily JV59_25030 cf6fd7c608a04df56e685a8cc1ce26b3 311 Gene3D G3DSA:3.30.460.20 2 125 5.9E-36 T 14-10-2018 JV59_25030 cf6fd7c608a04df56e685a8cc1ce26b3 311 Pfam PF01544 CorA-like Mg2+ transporter protein 30 306 3.5E-45 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 JV59_25030 cf6fd7c608a04df56e685a8cc1ce26b3 311 SUPERFAMILY SSF144083 247 307 2.88E-12 T 14-10-2018 JV59_25030 cf6fd7c608a04df56e685a8cc1ce26b3 311 Gene3D G3DSA:1.20.58.340 126 251 1.6E-22 T 14-10-2018 JV59_25030 cf6fd7c608a04df56e685a8cc1ce26b3 311 Gene3D G3DSA:1.20.58.340 254 311 1.2E-8 T 14-10-2018 JV59_25030 cf6fd7c608a04df56e685a8cc1ce26b3 311 SUPERFAMILY SSF143865 4 234 9.29E-34 T 14-10-2018 JV59_01370 f20adbfad74ebb7920c82431634652db 425 SMART SM01091 342 420 6.0E-21 T 14-10-2018 IPR005170 Transporter-associated domain JV59_01370 f20adbfad74ebb7920c82431634652db 425 SUPERFAMILY SSF56176 339 422 6.82E-20 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JV59_01370 f20adbfad74ebb7920c82431634652db 425 Gene3D G3DSA:3.30.465.10 340 418 2.5E-26 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JV59_01370 f20adbfad74ebb7920c82431634652db 425 Pfam PF01595 Domain of unknown function DUF21 13 181 3.6E-49 T 14-10-2018 IPR002550 CNNM, transmembrane domain JV59_01370 f20adbfad74ebb7920c82431634652db 425 Gene3D G3DSA:3.10.580.10 201 330 2.4E-40 T 14-10-2018 JV59_01370 f20adbfad74ebb7920c82431634652db 425 Pfam PF00571 CBS domain 279 326 3.8E-4 T 14-10-2018 IPR000644 CBS domain JV59_01370 f20adbfad74ebb7920c82431634652db 425 Pfam PF03471 Transporter associated domain 344 417 1.0E-15 T 14-10-2018 IPR005170 Transporter-associated domain JV59_01370 f20adbfad74ebb7920c82431634652db 425 SUPERFAMILY SSF54631 192 329 9.73E-24 T 14-10-2018 JV59_23245 9189677250b64edf9235610585bda95a 218 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 3 195 8.2E-53 T 14-10-2018 IPR006328 L-2-Haloacid dehalogenase GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 JV59_23245 9189677250b64edf9235610585bda95a 218 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 6 181 2.1E-21 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_23245 9189677250b64edf9235610585bda95a 218 SUPERFAMILY SSF56784 3 215 2.1E-45 T 14-10-2018 IPR036412 HAD-like superfamily JV59_23245 9189677250b64edf9235610585bda95a 218 Gene3D G3DSA:1.10.150.240 16 90 1.3E-65 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JV59_23245 9189677250b64edf9235610585bda95a 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 190 2.0E-13 T 14-10-2018 JV59_23245 9189677250b64edf9235610585bda95a 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 179 192 2.3E-18 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_23245 9189677250b64edf9235610585bda95a 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 28 41 2.3E-18 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_23245 9189677250b64edf9235610585bda95a 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 2.3E-18 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_23245 9189677250b64edf9235610585bda95a 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 2.3E-18 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_23245 9189677250b64edf9235610585bda95a 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 2.3E-18 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_23245 9189677250b64edf9235610585bda95a 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 42 55 2.3E-18 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_23245 9189677250b64edf9235610585bda95a 218 Gene3D G3DSA:3.40.50.1000 6 215 1.3E-65 T 14-10-2018 IPR023214 HAD superfamily JV59_35940 781899b3562f5a00f587e58c81cf1c16 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 35.375 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 JV59_35940 781899b3562f5a00f587e58c81cf1c16 372 Pfam PF04551 GcpE protein 14 354 1.1E-133 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 JV59_35940 781899b3562f5a00f587e58c81cf1c16 372 Gene3D G3DSA:3.30.413.10 262 361 2.3E-25 T 14-10-2018 JV59_35940 781899b3562f5a00f587e58c81cf1c16 372 PIRSF PIRSF004640 1 364 4.2E-148 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 JV59_35940 781899b3562f5a00f587e58c81cf1c16 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 352 4.3E-127 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 JV59_35940 781899b3562f5a00f587e58c81cf1c16 372 SUPERFAMILY SSF56014 265 354 2.56E-11 T 14-10-2018 JV59_35940 781899b3562f5a00f587e58c81cf1c16 372 SUPERFAMILY SSF51717 15 208 8.63E-11 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JV59_35940 781899b3562f5a00f587e58c81cf1c16 372 Gene3D G3DSA:3.20.20.20 1 261 1.9E-105 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JV59_00825 af499fabfd92834a42adb50891170adf 378 Pfam PF01464 Transglycosylase SLT domain 211 332 1.7E-28 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 JV59_00825 af499fabfd92834a42adb50891170adf 378 SUPERFAMILY SSF53955 206 370 5.35E-37 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily JV59_00825 af499fabfd92834a42adb50891170adf 378 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 JV59_00825 af499fabfd92834a42adb50891170adf 378 Gene3D G3DSA:1.10.530.10 190 371 8.5E-50 T 14-10-2018 JV59_00825 af499fabfd92834a42adb50891170adf 378 Pfam PF11873 Domain of unknown function (DUF3393) 3 206 4.4E-76 T 14-10-2018 IPR024570 Murein transglycosylase-C, N-terminal JV59_31620 f549899d971a5ca7d7c7bcd1000c908e 148 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 29.025 T 14-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 JV59_31620 f549899d971a5ca7d7c7bcd1000c908e 148 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 2.7E-26 T 14-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain JV59_31620 f549899d971a5ca7d7c7bcd1000c908e 148 Pfam PF06303 MatP N-terminal domain 2 85 6.7E-42 T 14-10-2018 IPR035087 MatP, N-terminal JV59_31620 f549899d971a5ca7d7c7bcd1000c908e 148 Gene3D G3DSA:1.20.1270.380 1 89 3.9E-47 T 14-10-2018 IPR038339 MatP, N-terminal domain superfamily JV59_31620 f549899d971a5ca7d7c7bcd1000c908e 148 Gene3D G3DSA:1.10.1220.10 98 148 4.3E-23 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 JV59_31620 f549899d971a5ca7d7c7bcd1000c908e 148 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 123 3.0E-58 T 14-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 JV59_39975 07e7dfc9451865cd8b6da3469fce52ea 104 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 103 25.874 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 JV59_39975 07e7dfc9451865cd8b6da3469fce52ea 104 SUPERFAMILY SSF55387 1 103 1.48E-37 T 14-10-2018 JV59_39975 07e7dfc9451865cd8b6da3469fce52ea 104 Pfam PF01491 Frataxin-like domain 1 100 8.4E-28 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 JV59_39975 07e7dfc9451865cd8b6da3469fce52ea 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 3.5E-40 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 JV59_39975 07e7dfc9451865cd8b6da3469fce52ea 104 SMART SM01219 1 104 4.9E-51 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 JV59_39975 07e7dfc9451865cd8b6da3469fce52ea 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 14-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 JV59_39975 07e7dfc9451865cd8b6da3469fce52ea 104 Gene3D G3DSA:3.30.920.10 1 103 2.5E-36 T 14-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 JV59_30460 f29bcdd3dde888d9dc3bedd42ad6d22f 282 Pfam PF01226 Formate/nitrite transporter 9 258 2.0E-59 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 JV59_30460 f29bcdd3dde888d9dc3bedd42ad6d22f 282 Gene3D G3DSA:1.20.1080.10 1 251 6.7E-64 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 JV59_18785 92bb3e7ef1336fb4792536d02d59629f 378 SUPERFAMILY SSF55068 28 203 5.36E-71 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JV59_18785 92bb3e7ef1336fb4792536d02d59629f 378 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 235 361 34.852 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 JV59_18785 92bb3e7ef1336fb4792536d02d59629f 378 Pfam PF01625 Peptide methionine sulfoxide reductase 41 191 1.8E-57 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JV59_18785 92bb3e7ef1336fb4792536d02d59629f 378 Gene3D G3DSA:3.30.1060.10 4 197 1.5E-62 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JV59_18785 92bb3e7ef1336fb4792536d02d59629f 378 Pfam PF01641 SelR domain 242 360 3.1E-46 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 JV59_18785 92bb3e7ef1336fb4792536d02d59629f 378 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 236 369 1.4E-59 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 JV59_18785 92bb3e7ef1336fb4792536d02d59629f 378 Gene3D G3DSA:2.170.150.20 231 378 9.7E-57 T 14-10-2018 JV59_18785 92bb3e7ef1336fb4792536d02d59629f 378 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 40 190 1.8E-50 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JV59_18785 92bb3e7ef1336fb4792536d02d59629f 378 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 38 197 35.724 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JV59_18785 92bb3e7ef1336fb4792536d02d59629f 378 SUPERFAMILY SSF51316 237 377 3.92E-59 T 14-10-2018 IPR011057 Mss4-like superfamily JV59_00105 8983f57585ced57c6ec157430ab44f4e 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 3.0E-101 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 JV59_00105 8983f57585ced57c6ec157430ab44f4e 223 Gene3D G3DSA:3.20.20.70 5 222 1.6E-88 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_00105 8983f57585ced57c6ec157430ab44f4e 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 JV59_00105 8983f57585ced57c6ec157430ab44f4e 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 7.0E-93 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 JV59_00105 8983f57585ced57c6ec157430ab44f4e 223 SUPERFAMILY SSF51366 4 218 2.09E-78 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 JV59_00105 8983f57585ced57c6ec157430ab44f4e 223 PIRSF PIRSF001461 1 223 4.1E-108 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 JV59_00105 8983f57585ced57c6ec157430ab44f4e 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 JV59_36170 af6cbc86edddc4689f1eeddd7c2a6c9a 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 2.9E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_36170 af6cbc86edddc4689f1eeddd7c2a6c9a 301 Gene3D G3DSA:3.40.190.10 98 297 2.4E-55 T 14-10-2018 JV59_36170 af6cbc86edddc4689f1eeddd7c2a6c9a 301 Pfam PF03466 LysR substrate binding domain 95 299 7.1E-36 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_36170 af6cbc86edddc4689f1eeddd7c2a6c9a 301 Gene3D G3DSA:3.40.190.10 168 269 2.4E-55 T 14-10-2018 JV59_36170 af6cbc86edddc4689f1eeddd7c2a6c9a 301 SUPERFAMILY SSF46785 4 117 5.89E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_36170 af6cbc86edddc4689f1eeddd7c2a6c9a 301 Gene3D G3DSA:1.10.10.10 2 89 1.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_36170 af6cbc86edddc4689f1eeddd7c2a6c9a 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_36170 af6cbc86edddc4689f1eeddd7c2a6c9a 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_36170 af6cbc86edddc4689f1eeddd7c2a6c9a 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_36170 af6cbc86edddc4689f1eeddd7c2a6c9a 301 SUPERFAMILY SSF53850 94 299 4.24E-33 T 14-10-2018 JV59_23550 c26571735161bef40f5c1c312427fd8f 298 SUPERFAMILY SSF103481 40 132 5.75E-12 T 14-10-2018 JV59_23550 c26571735161bef40f5c1c312427fd8f 298 Pfam PF00892 EamA-like transporter family 9 131 2.8E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_23550 c26571735161bef40f5c1c312427fd8f 298 Pfam PF00892 EamA-like transporter family 141 279 1.0E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_23550 c26571735161bef40f5c1c312427fd8f 298 SUPERFAMILY SSF103481 200 280 2.09E-10 T 14-10-2018 JV59_28035 b6d68d13c091d96287e95b6090392b3a 654 SMART SM00437 284 563 1.5E-87 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 JV59_28035 b6d68d13c091d96287e95b6090392b3a 654 Gene3D G3DSA:3.40.50.140 2 157 3.5E-61 T 14-10-2018 JV59_28035 b6d68d13c091d96287e95b6090392b3a 654 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 635 9.9E-239 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 JV59_28035 b6d68d13c091d96287e95b6090392b3a 654 SMART SM00493 2 125 1.3E-28 T 14-10-2018 IPR006171 TOPRIM domain JV59_28035 b6d68d13c091d96287e95b6090392b3a 654 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 JV59_28035 b6d68d13c091d96287e95b6090392b3a 654 Gene3D G3DSA:1.10.460.10 163 604 3.4E-164 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 JV59_28035 b6d68d13c091d96287e95b6090392b3a 654 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 647 65.318 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 JV59_28035 b6d68d13c091d96287e95b6090392b3a 654 SUPERFAMILY SSF56712 3 612 1.31E-184 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain JV59_28035 b6d68d13c091d96287e95b6090392b3a 654 Gene3D G3DSA:2.70.20.10 218 493 3.4E-164 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 JV59_28035 b6d68d13c091d96287e95b6090392b3a 654 Pfam PF01751 Toprim domain 4 132 1.1E-16 T 14-10-2018 IPR006171 TOPRIM domain JV59_28035 b6d68d13c091d96287e95b6090392b3a 654 Pfam PF01131 DNA topoisomerase 159 598 1.6E-113 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JV59_28035 b6d68d13c091d96287e95b6090392b3a 654 Gene3D G3DSA:1.10.290.10 293 422 3.4E-164 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 JV59_28035 b6d68d13c091d96287e95b6090392b3a 654 SMART SM00436 129 224 3.8E-32 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 JV59_28035 b6d68d13c091d96287e95b6090392b3a 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 4.4E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JV59_28035 b6d68d13c091d96287e95b6090392b3a 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 4.4E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JV59_28035 b6d68d13c091d96287e95b6090392b3a 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 4.4E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JV59_28035 b6d68d13c091d96287e95b6090392b3a 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 4.4E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JV59_28035 b6d68d13c091d96287e95b6090392b3a 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 4.4E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JV59_21030 24bb369df30625cea260f59b14b3f579 431 SUPERFAMILY SSF103473 11 414 2.09E-53 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_21030 24bb369df30625cea260f59b14b3f579 431 Gene3D G3DSA:1.20.1250.20 14 214 2.2E-22 T 14-10-2018 JV59_21030 24bb369df30625cea260f59b14b3f579 431 Gene3D G3DSA:1.20.1250.20 218 414 1.8E-20 T 14-10-2018 JV59_21030 24bb369df30625cea260f59b14b3f579 431 Pfam PF07690 Major Facilitator Superfamily 22 367 1.3E-30 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_33125 f2605549042c60b6cb23fb99ca1134cc 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 73.188 T 14-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 JV59_33125 f2605549042c60b6cb23fb99ca1134cc 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 3.1E-78 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 JV59_33125 f2605549042c60b6cb23fb99ca1134cc 562 SMART SM01274 78 258 1.8E-107 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 JV59_33125 f2605549042c60b6cb23fb99ca1134cc 562 SMART SM00919 268 528 6.4E-135 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 JV59_33125 f2605549042c60b6cb23fb99ca1134cc 562 PRINTS PR00072 Malic enzyme signature 144 173 3.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JV59_33125 f2605549042c60b6cb23fb99ca1134cc 562 PRINTS PR00072 Malic enzyme signature 180 202 3.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JV59_33125 f2605549042c60b6cb23fb99ca1134cc 562 PRINTS PR00072 Malic enzyme signature 264 280 3.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JV59_33125 f2605549042c60b6cb23fb99ca1134cc 562 PRINTS PR00072 Malic enzyme signature 239 257 3.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JV59_33125 f2605549042c60b6cb23fb99ca1134cc 562 PRINTS PR00072 Malic enzyme signature 84 108 3.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JV59_33125 f2605549042c60b6cb23fb99ca1134cc 562 PRINTS PR00072 Malic enzyme signature 295 311 3.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JV59_33125 f2605549042c60b6cb23fb99ca1134cc 562 PRINTS PR00072 Malic enzyme signature 405 421 3.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JV59_33125 f2605549042c60b6cb23fb99ca1134cc 562 PIRSF PIRSF000106 2 560 3.3E-227 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JV59_33125 f2605549042c60b6cb23fb99ca1134cc 562 Gene3D G3DSA:3.40.50.720 266 562 4.0E-111 T 14-10-2018 JV59_33125 f2605549042c60b6cb23fb99ca1134cc 562 SUPERFAMILY SSF53223 4 267 4.03E-110 T 14-10-2018 JV59_33125 f2605549042c60b6cb23fb99ca1134cc 562 SUPERFAMILY SSF51735 268 559 3.26E-97 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_33125 f2605549042c60b6cb23fb99ca1134cc 562 Gene3D G3DSA:3.40.50.10380 13 265 2.6E-115 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 JV59_33125 f2605549042c60b6cb23fb99ca1134cc 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 2.6E-104 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 JV59_33125 f2605549042c60b6cb23fb99ca1134cc 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 JV59_16240 c34bb415de63b4840ddee9ec40595342 478 Gene3D G3DSA:3.40.1390.10 4 89 4.9E-16 T 14-10-2018 JV59_16240 c34bb415de63b4840ddee9ec40595342 478 Gene3D G3DSA:3.90.190.20 330 477 6.3E-32 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JV59_16240 c34bb415de63b4840ddee9ec40595342 478 SUPERFAMILY SSF53244 323 457 1.83E-28 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JV59_16240 c34bb415de63b4840ddee9ec40595342 478 Pfam PF01225 Mur ligase family, catalytic domain 22 72 3.1E-5 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 JV59_16240 c34bb415de63b4840ddee9ec40595342 478 Pfam PF02875 Mur ligase family, glutamate ligase domain 323 402 2.0E-10 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 JV59_16240 c34bb415de63b4840ddee9ec40595342 478 SUPERFAMILY SSF63418 12 88 2.62E-15 T 14-10-2018 IPR035911 MurE/MurF, N-terminal JV59_16240 c34bb415de63b4840ddee9ec40595342 478 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 17 457 5.2E-102 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 JV59_16240 c34bb415de63b4840ddee9ec40595342 478 SUPERFAMILY SSF53623 91 318 1.05E-60 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JV59_16240 c34bb415de63b4840ddee9ec40595342 478 Gene3D G3DSA:3.40.1190.10 91 326 3.5E-65 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JV59_16240 c34bb415de63b4840ddee9ec40595342 478 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 98 122 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 JV59_16240 c34bb415de63b4840ddee9ec40595342 478 Pfam PF08245 Mur ligase middle domain 100 300 1.3E-49 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 JV59_26300 e7806e8e51c89d2454f904ddcc22f35a 182 SUPERFAMILY SSF50249 4 182 1.17E-63 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_26300 e7806e8e51c89d2454f904ddcc22f35a 182 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 39.484 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 JV59_26300 e7806e8e51c89d2454f904ddcc22f35a 182 PIRSF PIRSF002070 2 181 1.0E-38 T 14-10-2018 JV59_26300 e7806e8e51c89d2454f904ddcc22f35a 182 Pfam PF00436 Single-strand binding protein family 6 106 3.1E-43 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 JV59_26300 e7806e8e51c89d2454f904ddcc22f35a 182 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 182 1.4E-62 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 JV59_26300 e7806e8e51c89d2454f904ddcc22f35a 182 Gene3D G3DSA:2.40.50.140 2 145 4.2E-51 T 14-10-2018 JV59_18195 d9dad04530b38e68f215a6ba06ab4163 399 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JV59_18195 d9dad04530b38e68f215a6ba06ab4163 399 Hamap MF_00020 Acetate kinase [ackA]. 1 399 169.733 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JV59_18195 d9dad04530b38e68f215a6ba06ab4163 399 SUPERFAMILY SSF53067 5 196 6.02E-63 T 14-10-2018 JV59_18195 d9dad04530b38e68f215a6ba06ab4163 399 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 2.4E-146 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JV59_18195 d9dad04530b38e68f215a6ba06ab4163 399 Pfam PF00871 Acetokinase family 6 391 3.4E-145 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JV59_18195 d9dad04530b38e68f215a6ba06ab4163 399 PIRSF PIRSF000722 2 399 1.6E-136 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JV59_18195 d9dad04530b38e68f215a6ba06ab4163 399 PRINTS PR00471 Acetate kinase family signature 321 337 1.5E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JV59_18195 d9dad04530b38e68f215a6ba06ab4163 399 PRINTS PR00471 Acetate kinase family signature 203 224 1.5E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JV59_18195 d9dad04530b38e68f215a6ba06ab4163 399 PRINTS PR00471 Acetate kinase family signature 299 312 1.5E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JV59_18195 d9dad04530b38e68f215a6ba06ab4163 399 PRINTS PR00471 Acetate kinase family signature 6 17 1.5E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JV59_18195 d9dad04530b38e68f215a6ba06ab4163 399 PRINTS PR00471 Acetate kinase family signature 378 390 1.5E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JV59_18195 d9dad04530b38e68f215a6ba06ab4163 399 PRINTS PR00471 Acetate kinase family signature 173 186 1.5E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JV59_18195 d9dad04530b38e68f215a6ba06ab4163 399 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JV59_18195 d9dad04530b38e68f215a6ba06ab4163 399 SUPERFAMILY SSF53067 158 398 1.48E-80 T 14-10-2018 JV59_18195 d9dad04530b38e68f215a6ba06ab4163 399 Gene3D G3DSA:3.30.420.40 3 195 3.4E-67 T 14-10-2018 JV59_18195 d9dad04530b38e68f215a6ba06ab4163 399 Gene3D G3DSA:3.30.420.40 196 399 3.7E-74 T 14-10-2018 JV59_19055 8dc42685a929e0a4d1c3f64f439a6a89 458 PIRSF PIRSF000204 1 458 3.0E-235 T 14-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 JV59_19055 8dc42685a929e0a4d1c3f64f439a6a89 458 SUPERFAMILY SSF52467 285 458 5.35E-79 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JV59_19055 8dc42685a929e0a4d1c3f64f439a6a89 458 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 456 7.1E-203 T 14-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 JV59_19055 8dc42685a929e0a4d1c3f64f439a6a89 458 Gene3D G3DSA:3.40.50.1220 282 458 2.3E-89 T 14-10-2018 JV59_16940 3d8bcdc223359831c3559476c1935bcb 294 Gene3D G3DSA:3.40.190.290 93 293 1.9E-16 T 14-10-2018 JV59_16940 3d8bcdc223359831c3559476c1935bcb 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.6E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_16940 3d8bcdc223359831c3559476c1935bcb 294 Pfam PF03466 LysR substrate binding domain 89 290 3.3E-25 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_16940 3d8bcdc223359831c3559476c1935bcb 294 SUPERFAMILY SSF53850 90 292 8.69E-29 T 14-10-2018 JV59_16940 3d8bcdc223359831c3559476c1935bcb 294 SUPERFAMILY SSF46785 2 110 1.52E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_16940 3d8bcdc223359831c3559476c1935bcb 294 Gene3D G3DSA:1.10.10.10 1 92 1.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_20175 e0dec072dcd64fd85495c29fec7875a8 254 SMART SM00420 6 58 1.5E-26 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 JV59_20175 e0dec072dcd64fd85495c29fec7875a8 254 SMART SM01134 72 234 6.4E-67 T 14-10-2018 JV59_20175 e0dec072dcd64fd85495c29fec7875a8 254 SUPERFAMILY SSF100950 74 234 3.1E-26 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JV59_20175 e0dec072dcd64fd85495c29fec7875a8 254 SUPERFAMILY SSF46785 5 71 3.33E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_20175 e0dec072dcd64fd85495c29fec7875a8 254 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.2E-23 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 JV59_20175 e0dec072dcd64fd85495c29fec7875a8 254 Gene3D G3DSA:1.10.10.10 1 70 6.0E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_20175 e0dec072dcd64fd85495c29fec7875a8 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 JV59_20175 e0dec072dcd64fd85495c29fec7875a8 254 Gene3D G3DSA:3.30.750.70 71 134 2.3E-6 T 14-10-2018 JV59_20175 e0dec072dcd64fd85495c29fec7875a8 254 Pfam PF00455 DeoR C terminal sensor domain 75 233 1.9E-50 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain JV59_20175 e0dec072dcd64fd85495c29fec7875a8 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.2E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 JV59_20175 e0dec072dcd64fd85495c29fec7875a8 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.2E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 JV59_26120 3a2293e76c7477fac5f806dc65eceeb4 394 SUPERFAMILY SSF52540 6 219 1.12E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_26120 3a2293e76c7477fac5f806dc65eceeb4 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.4E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JV59_26120 3a2293e76c7477fac5f806dc65eceeb4 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 2.1E-230 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JV59_26120 3a2293e76c7477fac5f806dc65eceeb4 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 2.3E-58 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_26120 3a2293e76c7477fac5f806dc65eceeb4 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site JV59_26120 3a2293e76c7477fac5f806dc65eceeb4 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 7.0E-16 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 JV59_26120 3a2293e76c7477fac5f806dc65eceeb4 394 SUPERFAMILY SSF50447 205 301 3.73E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JV59_26120 3a2293e76c7477fac5f806dc65eceeb4 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.46 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JV59_26120 3a2293e76c7477fac5f806dc65eceeb4 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 9.7E-34 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal JV59_26120 3a2293e76c7477fac5f806dc65eceeb4 394 Gene3D G3DSA:3.40.50.300 1 203 1.6E-70 T 14-10-2018 JV59_26120 3a2293e76c7477fac5f806dc65eceeb4 394 SUPERFAMILY SSF50465 298 393 1.55E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal JV59_26120 3a2293e76c7477fac5f806dc65eceeb4 394 Gene3D G3DSA:2.40.30.10 206 334 2.1E-52 T 14-10-2018 JV59_26120 3a2293e76c7477fac5f806dc65eceeb4 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_26120 3a2293e76c7477fac5f806dc65eceeb4 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_26120 3a2293e76c7477fac5f806dc65eceeb4 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_26120 3a2293e76c7477fac5f806dc65eceeb4 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_26120 3a2293e76c7477fac5f806dc65eceeb4 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_26120 3a2293e76c7477fac5f806dc65eceeb4 394 Gene3D G3DSA:2.40.30.10 338 393 1.0E-29 T 14-10-2018 JV59_26770 93cb57146abd8c8ad1b2e264a464c05a 189 Pfam PF03923 Uncharacterized lipoprotein 28 186 2.4E-48 T 14-10-2018 IPR005619 Uncharacterised protein family, YajG JV59_25835 8b0b05029ea83cc6976b0e8382bb536a 294 Pfam PF03466 LysR substrate binding domain 87 292 2.6E-39 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_25835 8b0b05029ea83cc6976b0e8382bb536a 294 Gene3D G3DSA:1.10.10.10 3 89 1.9E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_25835 8b0b05029ea83cc6976b0e8382bb536a 294 SUPERFAMILY SSF53850 87 292 9.05E-41 T 14-10-2018 JV59_25835 8b0b05029ea83cc6976b0e8382bb536a 294 Gene3D G3DSA:3.40.190.10 90 289 2.5E-57 T 14-10-2018 JV59_25835 8b0b05029ea83cc6976b0e8382bb536a 294 SUPERFAMILY SSF46785 4 87 4.63E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_25835 8b0b05029ea83cc6976b0e8382bb536a 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.1E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_25835 8b0b05029ea83cc6976b0e8382bb536a 294 Gene3D G3DSA:3.40.190.10 161 263 2.5E-57 T 14-10-2018 JV59_15990 c18b993a75f82c6a40912576bc4ca5d6 421 Gene3D G3DSA:3.50.50.60 7 87 2.3E-12 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_15990 c18b993a75f82c6a40912576bc4ca5d6 421 SUPERFAMILY SSF54373 276 364 3.53E-9 T 14-10-2018 JV59_15990 c18b993a75f82c6a40912576bc4ca5d6 421 SUPERFAMILY SSF51905 11 420 9.71E-35 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_15990 c18b993a75f82c6a40912576bc4ca5d6 421 Pfam PF01266 FAD dependent oxidoreductase 11 402 5.8E-51 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JV59_15990 c18b993a75f82c6a40912576bc4ca5d6 421 Gene3D G3DSA:3.50.50.60 111 402 1.7E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_15990 c18b993a75f82c6a40912576bc4ca5d6 421 Gene3D G3DSA:3.30.9.10 142 363 1.7E-30 T 14-10-2018 JV59_02295 48533f477b5cad51ef260daddbc5f187 407 Gene3D G3DSA:2.40.30.10 126 264 1.1E-52 T 14-10-2018 JV59_02295 48533f477b5cad51ef260daddbc5f187 407 SUPERFAMILY SSF52343 258 402 1.83E-35 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JV59_02295 48533f477b5cad51ef260daddbc5f187 407 Gene3D G3DSA:3.40.50.80 275 393 2.6E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JV59_02295 48533f477b5cad51ef260daddbc5f187 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 5.1E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JV59_02295 48533f477b5cad51ef260daddbc5f187 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 5.1E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JV59_02295 48533f477b5cad51ef260daddbc5f187 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 302 311 5.1E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JV59_02295 48533f477b5cad51ef260daddbc5f187 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 5.1E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JV59_02295 48533f477b5cad51ef260daddbc5f187 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 381 5.1E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JV59_02295 48533f477b5cad51ef260daddbc5f187 407 SUPERFAMILY SSF54292 35 124 2.28E-21 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JV59_02295 48533f477b5cad51ef260daddbc5f187 407 PIRSF PIRSF000044 1 407 6.1E-218 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 JV59_02295 48533f477b5cad51ef260daddbc5f187 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 2.2E-226 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 JV59_02295 48533f477b5cad51ef260daddbc5f187 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 44 115 9.2E-10 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JV59_02295 48533f477b5cad51ef260daddbc5f187 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 385 1.3E-16 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 JV59_02295 48533f477b5cad51ef260daddbc5f187 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.604 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 JV59_02295 48533f477b5cad51ef260daddbc5f187 407 Gene3D G3DSA:3.10.20.30 34 125 2.7E-31 T 14-10-2018 IPR012675 Beta-grasp domain superfamily JV59_02295 48533f477b5cad51ef260daddbc5f187 407 SUPERFAMILY SSF63380 105 272 2.04E-35 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JV59_02295 48533f477b5cad51ef260daddbc5f187 407 Pfam PF00970 Oxidoreductase FAD-binding domain 204 266 6.9E-9 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 JV59_02400 58a5842e6299973a3c8232b9f156bbae 368 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 104 2.2E-16 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain JV59_02400 58a5842e6299973a3c8232b9f156bbae 368 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 151 362 7.1E-57 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 JV59_02400 58a5842e6299973a3c8232b9f156bbae 368 SUPERFAMILY SSF53597 149 361 2.23E-53 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 JV59_02400 58a5842e6299973a3c8232b9f156bbae 368 PIRSF PIRSF006769 3 366 9.7E-118 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 JV59_02400 58a5842e6299973a3c8232b9f156bbae 368 SUPERFAMILY SSF53927 8 150 5.69E-45 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 JV59_02400 58a5842e6299973a3c8232b9f156bbae 368 Pfam PF01872 RibD C-terminal domain 152 357 6.9E-50 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 JV59_02400 58a5842e6299973a3c8232b9f156bbae 368 Gene3D G3DSA:3.40.430.10 146 367 4.7E-64 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 JV59_02400 58a5842e6299973a3c8232b9f156bbae 368 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 93 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 JV59_02400 58a5842e6299973a3c8232b9f156bbae 368 Gene3D G3DSA:3.40.140.10 2 145 7.0E-42 T 14-10-2018 JV59_02400 58a5842e6299973a3c8232b9f156bbae 368 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 12 359 9.1E-125 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 JV59_18835 5e03f677beee061561ab229d7f7430ef 372 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 281 3.2E-14 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JV59_18835 5e03f677beee061561ab229d7f7430ef 372 SUPERFAMILY SSF111369 49 289 1.83E-63 T 14-10-2018 JV59_18835 5e03f677beee061561ab229d7f7430ef 372 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 364 2.6E-84 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 JV59_18835 5e03f677beee061561ab229d7f7430ef 372 Gene3D G3DSA:2.40.30.170 52 275 1.2E-75 T 14-10-2018 JV59_18835 5e03f677beee061561ab229d7f7430ef 372 Gene3D G3DSA:2.40.420.20 276 366 1.0E-21 T 14-10-2018 JV59_18835 5e03f677beee061561ab229d7f7430ef 372 Gene3D G3DSA:2.40.50.100 58 201 1.2E-75 T 14-10-2018 JV59_18835 5e03f677beee061561ab229d7f7430ef 372 Gene3D G3DSA:1.10.287.470 93 166 1.2E-75 T 14-10-2018 JV59_32590 1b80e9c90e26d78648d9522f7d99c584 209 SUPERFAMILY SSF56784 3 208 1.44E-48 T 14-10-2018 IPR036412 HAD-like superfamily JV59_32590 1b80e9c90e26d78648d9522f7d99c584 209 Gene3D G3DSA:1.10.150.240 17 86 2.3E-47 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JV59_32590 1b80e9c90e26d78648d9522f7d99c584 209 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 186 2.0E-34 T 14-10-2018 JV59_32590 1b80e9c90e26d78648d9522f7d99c584 209 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 66 186 1.1E-18 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_32590 1b80e9c90e26d78648d9522f7d99c584 209 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 168 3.5E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_32590 1b80e9c90e26d78648d9522f7d99c584 209 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 99 112 3.5E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_32590 1b80e9c90e26d78648d9522f7d99c584 209 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 3.5E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_32590 1b80e9c90e26d78648d9522f7d99c584 209 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 130 146 3.5E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_32590 1b80e9c90e26d78648d9522f7d99c584 209 Gene3D G3DSA:3.40.50.1000 8 198 2.3E-47 T 14-10-2018 IPR023214 HAD superfamily JV59_00125 97c1bdf91eb87936e309c7b12887de08 205 Gene3D G3DSA:2.40.500.20 90 205 1.0E-47 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_00125 97c1bdf91eb87936e309c7b12887de08 205 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 195 9.8E-40 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_00125 97c1bdf91eb87936e309c7b12887de08 205 SUPERFAMILY SSF46609 1 86 2.49E-30 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_00125 97c1bdf91eb87936e309c7b12887de08 205 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_00125 97c1bdf91eb87936e309c7b12887de08 205 Gene3D G3DSA:1.10.287.990 20 85 1.3E-24 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_00125 97c1bdf91eb87936e309c7b12887de08 205 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 1.3E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_00125 97c1bdf91eb87936e309c7b12887de08 205 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.3E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_00125 97c1bdf91eb87936e309c7b12887de08 205 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.3E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_00125 97c1bdf91eb87936e309c7b12887de08 205 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 1.3E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_00125 97c1bdf91eb87936e309c7b12887de08 205 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 1.3E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_00125 97c1bdf91eb87936e309c7b12887de08 205 SUPERFAMILY SSF54719 88 201 8.38E-44 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_00125 97c1bdf91eb87936e309c7b12887de08 205 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 7.2E-27 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_00125 97c1bdf91eb87936e309c7b12887de08 205 PIRSF PIRSF000349 1 205 4.7E-81 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_36135 3e551600d861102febf27f0f4d16d9ad 607 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 607 47.017 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 JV59_36135 3e551600d861102febf27f0f4d16d9ad 607 Pfam PF13721 SecD export protein N-terminal TM region 1 92 2.0E-29 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain JV59_36135 3e551600d861102febf27f0f4d16d9ad 607 Gene3D G3DSA:1.20.1640.10 441 592 7.7E-7 T 14-10-2018 JV59_36135 3e551600d861102febf27f0f4d16d9ad 607 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 112 593 3.0E-150 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 JV59_36135 3e551600d861102febf27f0f4d16d9ad 607 Gene3D G3DSA:3.30.70.260 40 94 2.4E-5 T 14-10-2018 JV59_36135 3e551600d861102febf27f0f4d16d9ad 607 SUPERFAMILY SSF82866 402 598 3.14E-44 T 14-10-2018 JV59_36135 3e551600d861102febf27f0f4d16d9ad 607 Gene3D G3DSA:3.30.70.3400 212 429 3.4E-50 T 14-10-2018 JV59_36135 3e551600d861102febf27f0f4d16d9ad 607 Pfam PF02355 Protein export membrane protein 425 587 1.1E-18 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial JV59_36135 3e551600d861102febf27f0f4d16d9ad 607 Pfam PF07549 SecD/SecF GG Motif 105 130 5.2E-7 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site JV59_36135 3e551600d861102febf27f0f4d16d9ad 607 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 337 586 4.5E-82 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JV59_36135 3e551600d861102febf27f0f4d16d9ad 607 Gene3D G3DSA:3.30.1360.200 270 423 3.4E-50 T 14-10-2018 JV59_33190 4713650097f1aad78def22eaf618f932 397 SUPERFAMILY SSF103473 3 393 3.92E-53 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_33190 4713650097f1aad78def22eaf618f932 397 Pfam PF07690 Major Facilitator Superfamily 10 344 3.4E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_33190 4713650097f1aad78def22eaf618f932 397 Gene3D G3DSA:1.20.1720.10 4 383 5.2E-75 T 14-10-2018 JV59_33190 4713650097f1aad78def22eaf618f932 397 ProSitePatterns PS00782 Transcription factor TFIIB repeat signature. 66 81 - T 14-10-2018 IPR023486 Transcription factor TFIIB, conserved site Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-674695|Reactome: R-HSA-6807505|Reactome: R-HSA-73776|Reactome: R-HSA-73779|Reactome: R-HSA-75953|Reactome: R-HSA-76042 JV59_32025 284b70f5d57de758d871eb1e03cec0cc 499 Pfam PF00563 EAL domain 258 488 2.8E-63 T 14-10-2018 IPR001633 EAL domain JV59_32025 284b70f5d57de758d871eb1e03cec0cc 499 Gene3D G3DSA:3.20.20.450 250 498 1.2E-73 T 14-10-2018 IPR035919 EAL domain superfamily JV59_32025 284b70f5d57de758d871eb1e03cec0cc 499 SMART SM00052 251 493 1.3E-82 T 14-10-2018 IPR001633 EAL domain JV59_32025 284b70f5d57de758d871eb1e03cec0cc 499 SUPERFAMILY SSF141868 257 496 1.7E-70 T 14-10-2018 IPR035919 EAL domain superfamily JV59_32025 284b70f5d57de758d871eb1e03cec0cc 499 Pfam PF12792 CSS motif domain associated with EAL 44 221 1.1E-8 T 14-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain JV59_37890 5ad6deba35bc835b7116ca4af2e32c47 92 SUPERFAMILY SSF54570 3 83 1.57E-35 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37890 5ad6deba35bc835b7116ca4af2e32c47 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 2.5E-46 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 JV59_37890 5ad6deba35bc835b7116ca4af2e32c47 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37890 5ad6deba35bc835b7116ca4af2e32c47 92 Gene3D G3DSA:3.30.860.10 1 92 3.1E-43 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37890 5ad6deba35bc835b7116ca4af2e32c47 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.429 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37890 5ad6deba35bc835b7116ca4af2e32c47 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 7.7E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37890 5ad6deba35bc835b7116ca4af2e32c47 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 7.7E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37890 5ad6deba35bc835b7116ca4af2e32c47 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 7.7E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37890 5ad6deba35bc835b7116ca4af2e32c47 92 Pfam PF00203 Ribosomal protein S19 3 83 7.0E-37 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37890 5ad6deba35bc835b7116ca4af2e32c47 92 PIRSF PIRSF002144 1 92 1.9E-31 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_22740 2c72f301181dd5520e0ff0770306ba4e 288 Gene3D G3DSA:1.10.357.140 13 182 3.7E-18 T 14-10-2018 JV59_22740 2c72f301181dd5520e0ff0770306ba4e 288 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 57 79 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site JV59_22740 2c72f301181dd5520e0ff0770306ba4e 288 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 276 1.3E-82 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 JV59_22740 2c72f301181dd5520e0ff0770306ba4e 288 Pfam PF01040 UbiA prenyltransferase family 18 269 3.5E-53 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 JV59_22740 2c72f301181dd5520e0ff0770306ba4e 288 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 284 16.901 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 JV59_31780 db0be49b408017e2af0ed4eaf898d32c 220 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 214 1.8E-37 T 14-10-2018 IPR006214 Bax inhibitor 1-related JV59_31780 db0be49b408017e2af0ed4eaf898d32c 220 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 88 118 - T 14-10-2018 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 JV59_00165 fd3f977b100e5a2abf1d4fb27386ea84 340 Pfam PF04055 Radical SAM superfamily 117 188 2.9E-7 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JV59_00165 fd3f977b100e5a2abf1d4fb27386ea84 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 11 328 2.2E-123 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase JV59_00165 fd3f977b100e5a2abf1d4fb27386ea84 340 Pfam PF13394 4Fe-4S single cluster domain 116 190 1.2E-6 T 14-10-2018 JV59_00165 fd3f977b100e5a2abf1d4fb27386ea84 340 PIRSF PIRSF004911 3 340 2.1E-112 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase JV59_00165 fd3f977b100e5a2abf1d4fb27386ea84 340 Gene3D G3DSA:3.20.20.70 51 334 2.9E-87 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_00165 fd3f977b100e5a2abf1d4fb27386ea84 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 6.2E-152 T 14-10-2018 IPR022462 Lysine-2,3-aminomutase-like JV59_00165 fd3f977b100e5a2abf1d4fb27386ea84 340 SUPERFAMILY SSF102114 101 324 4.45E-24 T 14-10-2018 JV59_26160 187a9e8b4d8a993980b04752989eddcb 358 SUPERFAMILY SSF50621 227 356 3.84E-47 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 JV59_26160 187a9e8b4d8a993980b04752989eddcb 358 TIGRFAM TIGR00492 alr: alanine racemase 3 356 1.1E-131 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_26160 187a9e8b4d8a993980b04752989eddcb 358 SMART SM01005 233 357 1.2E-69 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_26160 187a9e8b4d8a993980b04752989eddcb 358 PRINTS PR00992 Alanine racemase signature 120 132 2.5E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_26160 187a9e8b4d8a993980b04752989eddcb 358 PRINTS PR00992 Alanine racemase signature 60 78 2.5E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_26160 187a9e8b4d8a993980b04752989eddcb 358 PRINTS PR00992 Alanine racemase signature 26 42 2.5E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_26160 187a9e8b4d8a993980b04752989eddcb 358 PRINTS PR00992 Alanine racemase signature 339 352 2.5E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_26160 187a9e8b4d8a993980b04752989eddcb 358 PRINTS PR00992 Alanine racemase signature 192 219 2.5E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_26160 187a9e8b4d8a993980b04752989eddcb 358 PRINTS PR00992 Alanine racemase signature 287 304 2.5E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_26160 187a9e8b4d8a993980b04752989eddcb 358 PRINTS PR00992 Alanine racemase signature 249 264 2.5E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_26160 187a9e8b4d8a993980b04752989eddcb 358 PRINTS PR00992 Alanine racemase signature 266 281 2.5E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_26160 187a9e8b4d8a993980b04752989eddcb 358 PRINTS PR00992 Alanine racemase signature 155 166 2.5E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_26160 187a9e8b4d8a993980b04752989eddcb 358 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 2.1E-71 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_26160 187a9e8b4d8a993980b04752989eddcb 358 Gene3D G3DSA:3.20.20.10 10 217 1.8E-133 T 14-10-2018 IPR029066 PLP-binding barrel JV59_26160 187a9e8b4d8a993980b04752989eddcb 358 Gene3D G3DSA:2.40.37.10 8 352 1.8E-133 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 JV59_26160 187a9e8b4d8a993980b04752989eddcb 358 SUPERFAMILY SSF51419 8 234 1.83E-71 T 14-10-2018 IPR029066 PLP-binding barrel JV59_26160 187a9e8b4d8a993980b04752989eddcb 358 Pfam PF00842 Alanine racemase, C-terminal domain 233 356 6.7E-43 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_26160 187a9e8b4d8a993980b04752989eddcb 358 Hamap MF_01201 Alanine racemase. 1 357 35.482 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_32830 f12af090392b64123f99e3e578e8bc63 178 Pfam PF13302 Acetyltransferase (GNAT) domain 9 147 8.0E-18 T 14-10-2018 IPR000182 GNAT domain JV59_32830 f12af090392b64123f99e3e578e8bc63 178 Gene3D G3DSA:3.40.630.30 2 178 3.1E-40 T 14-10-2018 JV59_32830 f12af090392b64123f99e3e578e8bc63 178 SUPERFAMILY SSF55729 3 171 1.31E-36 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_39645 53713ebd66440cb50a609dc29b190c2d 220 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 198 27.4 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 JV59_39645 53713ebd66440cb50a609dc29b190c2d 220 SUPERFAMILY SSF52540 6 198 9.89E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_39645 53713ebd66440cb50a609dc29b190c2d 220 Pfam PF01926 50S ribosome-binding GTPase 29 147 4.7E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JV59_39645 53713ebd66440cb50a609dc29b190c2d 220 Gene3D G3DSA:3.40.50.300 3 204 1.1E-57 T 14-10-2018 JV59_39645 53713ebd66440cb50a609dc29b190c2d 220 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 194 1.6E-71 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 JV59_21175 072f09c626096b6f9dda19cc797673dc 311 Gene3D G3DSA:3.40.50.12370 1 311 2.4E-83 T 14-10-2018 JV59_21175 072f09c626096b6f9dda19cc797673dc 311 SUPERFAMILY SSF52402 152 308 3.68E-19 T 14-10-2018 JV59_21175 072f09c626096b6f9dda19cc797673dc 311 Pfam PF00582 Universal stress protein family 151 301 8.7E-13 T 14-10-2018 IPR006016 UspA JV59_21175 072f09c626096b6f9dda19cc797673dc 311 SUPERFAMILY SSF52402 1 143 6.95E-11 T 14-10-2018 JV59_23990 407e9d8505eb8fb6134a44f567e58f61 317 Gene3D G3DSA:3.40.190.290 91 296 6.2E-47 T 14-10-2018 JV59_23990 407e9d8505eb8fb6134a44f567e58f61 317 Gene3D G3DSA:1.10.10.10 3 90 3.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_23990 407e9d8505eb8fb6134a44f567e58f61 317 SUPERFAMILY SSF46785 5 86 8.57E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_23990 407e9d8505eb8fb6134a44f567e58f61 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.6E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_23990 407e9d8505eb8fb6134a44f567e58f61 317 SUPERFAMILY SSF53850 90 300 2.35E-34 T 14-10-2018 JV59_23990 407e9d8505eb8fb6134a44f567e58f61 317 Pfam PF03466 LysR substrate binding domain 88 296 1.8E-32 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_21520 e8b84d7fdff84f12e6633c6192216929 1029 SUPERFAMILY SSF82714 717 790 1.24E-8 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_21520 e8b84d7fdff84f12e6633c6192216929 1029 SUPERFAMILY SSF82693 41 132 2.67E-19 T 14-10-2018 JV59_21520 e8b84d7fdff84f12e6633c6192216929 1029 Gene3D G3DSA:3.30.2090.10 175 265 3.6E-236 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_21520 e8b84d7fdff84f12e6633c6192216929 1029 SUPERFAMILY SSF82866 789 1018 6.54E-45 T 14-10-2018 JV59_21520 e8b84d7fdff84f12e6633c6192216929 1029 Gene3D G3DSA:3.30.70.1430 41 800 3.6E-236 T 14-10-2018 JV59_21520 e8b84d7fdff84f12e6633c6192216929 1029 SUPERFAMILY SSF82866 288 482 1.44E-35 T 14-10-2018 JV59_21520 e8b84d7fdff84f12e6633c6192216929 1029 SUPERFAMILY SSF82714 179 263 3.27E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_21520 e8b84d7fdff84f12e6633c6192216929 1029 Gene3D G3DSA:3.30.2090.10 705 792 3.6E-236 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_21520 e8b84d7fdff84f12e6633c6192216929 1029 Pfam PF00873 AcrB/AcrD/AcrF family 5 588 1.4E-96 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_21520 e8b84d7fdff84f12e6633c6192216929 1029 Pfam PF00873 AcrB/AcrD/AcrF family 669 1008 1.2E-55 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_21520 e8b84d7fdff84f12e6633c6192216929 1029 Gene3D G3DSA:1.20.1640.10 500 1008 3.6E-236 T 14-10-2018 JV59_21520 e8b84d7fdff84f12e6633c6192216929 1029 PRINTS PR00702 Acriflavin resistance protein family signature 352 373 9.3E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_21520 e8b84d7fdff84f12e6633c6192216929 1029 PRINTS PR00702 Acriflavin resistance protein family signature 458 481 9.3E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_21520 e8b84d7fdff84f12e6633c6192216929 1029 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 9.3E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_21520 e8b84d7fdff84f12e6633c6192216929 1029 PRINTS PR00702 Acriflavin resistance protein family signature 380 404 9.3E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_21520 e8b84d7fdff84f12e6633c6192216929 1029 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 9.3E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_21520 e8b84d7fdff84f12e6633c6192216929 1029 Gene3D G3DSA:3.30.70.1320 134 322 3.6E-236 T 14-10-2018 JV59_21520 e8b84d7fdff84f12e6633c6192216929 1029 SUPERFAMILY SSF82693 137 318 6.02E-12 T 14-10-2018 JV59_21520 e8b84d7fdff84f12e6633c6192216929 1029 Gene3D G3DSA:3.30.70.1430 557 659 3.6E-236 T 14-10-2018 JV59_21520 e8b84d7fdff84f12e6633c6192216929 1029 Gene3D G3DSA:1.20.1640.10 11 499 3.6E-236 T 14-10-2018 JV59_21520 e8b84d7fdff84f12e6633c6192216929 1029 Gene3D G3DSA:3.30.70.1440 660 852 3.6E-236 T 14-10-2018 JV59_27865 36bb1e716da963ee3e0a03c68271f7e9 676 SUPERFAMILY SSF52540 4 416 3.72E-136 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_27865 36bb1e716da963ee3e0a03c68271f7e9 676 Gene3D G3DSA:4.10.860.10 618 676 3.7E-20 T 14-10-2018 JV59_27865 36bb1e716da963ee3e0a03c68271f7e9 676 Gene3D G3DSA:3.40.50.300 416 597 4.7E-50 T 14-10-2018 JV59_27865 36bb1e716da963ee3e0a03c68271f7e9 676 Pfam PF00271 Helicase conserved C-terminal domain 442 545 2.6E-17 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_27865 36bb1e716da963ee3e0a03c68271f7e9 676 Pfam PF12344 Ultra-violet resistance protein B 553 595 7.6E-19 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain JV59_27865 36bb1e716da963ee3e0a03c68271f7e9 676 Pfam PF02151 UvrB/uvrC motif 636 671 1.3E-8 T 14-10-2018 IPR001943 UVR domain GO:0005515 JV59_27865 36bb1e716da963ee3e0a03c68271f7e9 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 JV59_27865 36bb1e716da963ee3e0a03c68271f7e9 676 Gene3D G3DSA:3.40.50.300 270 415 4.2E-50 T 14-10-2018 JV59_27865 36bb1e716da963ee3e0a03c68271f7e9 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 42.78 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 JV59_27865 36bb1e716da963ee3e0a03c68271f7e9 676 SUPERFAMILY SSF52540 37 580 1.09E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_27865 36bb1e716da963ee3e0a03c68271f7e9 676 Gene3D G3DSA:3.40.50.300 1 233 3.0E-73 T 14-10-2018 JV59_27865 36bb1e716da963ee3e0a03c68271f7e9 676 SMART SM00490 461 547 1.0E-19 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_27865 36bb1e716da963ee3e0a03c68271f7e9 676 SMART SM00487 9 427 1.3E-26 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JV59_27865 36bb1e716da963ee3e0a03c68271f7e9 676 Pfam PF04851 Type III restriction enzyme, res subunit 15 129 1.9E-8 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 JV59_27865 36bb1e716da963ee3e0a03c68271f7e9 676 SUPERFAMILY SSF46600 625 672 8.63E-12 T 14-10-2018 IPR036876 UVR domain superfamily JV59_22850 d75ad83fa9aa59ab6437e02f0d7d888e 207 Gene3D G3DSA:3.40.50.300 8 203 4.0E-53 T 14-10-2018 JV59_22850 d75ad83fa9aa59ab6437e02f0d7d888e 207 Hamap MF_01389 Urease accessory protein UreG [ureG]. 6 204 47.696 T 14-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 JV59_22850 d75ad83fa9aa59ab6437e02f0d7d888e 207 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 8 199 3.7E-104 T 14-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 JV59_22850 d75ad83fa9aa59ab6437e02f0d7d888e 207 SUPERFAMILY SSF52540 4 198 4.39E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_22850 d75ad83fa9aa59ab6437e02f0d7d888e 207 PIRSF PIRSF005624 2 205 6.7E-52 T 14-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 JV59_22850 d75ad83fa9aa59ab6437e02f0d7d888e 207 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 10 179 3.5E-41 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain JV59_23410 e7b946fe440f55f992d15548c572e721 220 Pfam PF03070 TENA/THI-4/PQQC family 11 218 4.8E-46 T 14-10-2018 IPR004305 Thiaminase-2/PQQC JV59_23410 e7b946fe440f55f992d15548c572e721 220 SUPERFAMILY SSF48613 3 216 2.67E-68 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 JV59_23410 e7b946fe440f55f992d15548c572e721 220 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 11 215 1.8E-42 T 14-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 JV59_23410 e7b946fe440f55f992d15548c572e721 220 Gene3D G3DSA:1.20.910.10 2 220 1.9E-64 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 JV59_02590 c15f95bbb5e5c18f92cbdf916c9c93ef 816 Gene3D G3DSA:2.40.110.10 237 360 1.1E-98 T 14-10-2018 JV59_02590 c15f95bbb5e5c18f92cbdf916c9c93ef 816 SUPERFAMILY SSF47203 361 508 2.09E-23 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JV59_02590 c15f95bbb5e5c18f92cbdf916c9c93ef 816 Gene3D G3DSA:1.20.140.10 361 508 1.1E-98 T 14-10-2018 JV59_02590 c15f95bbb5e5c18f92cbdf916c9c93ef 816 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 136 234 9.6E-15 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JV59_02590 c15f95bbb5e5c18f92cbdf916c9c93ef 816 Gene3D G3DSA:1.10.540.10 123 236 1.1E-98 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JV59_02590 c15f95bbb5e5c18f92cbdf916c9c93ef 816 SUPERFAMILY SSF56645 121 356 1.05E-41 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JV59_02590 c15f95bbb5e5c18f92cbdf916c9c93ef 816 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 3.5E-14 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JV59_02590 c15f95bbb5e5c18f92cbdf916c9c93ef 816 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 1.2E-113 T 14-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 JV59_31065 789c5ed35d4ed4bbde1a399d80190ed0 371 Gene3D G3DSA:2.40.50.940 230 292 3.5E-11 T 14-10-2018 JV59_31065 789c5ed35d4ed4bbde1a399d80190ed0 371 SUPERFAMILY SSF52540 12 251 1.91E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_31065 789c5ed35d4ed4bbde1a399d80190ed0 371 SMART SM00382 36 219 6.8E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_31065 789c5ed35d4ed4bbde1a399d80190ed0 371 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_31065 789c5ed35d4ed4bbde1a399d80190ed0 371 Gene3D G3DSA:2.40.50.140 293 310 3.5E-11 T 14-10-2018 JV59_31065 789c5ed35d4ed4bbde1a399d80190ed0 371 Pfam PF00005 ABC transporter 29 168 3.4E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_31065 789c5ed35d4ed4bbde1a399d80190ed0 371 Pfam PF08402 TOBE domain 286 365 8.0E-12 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 JV59_31065 789c5ed35d4ed4bbde1a399d80190ed0 371 SUPERFAMILY SSF50331 244 366 1.42E-8 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal JV59_31065 789c5ed35d4ed4bbde1a399d80190ed0 371 Gene3D G3DSA:3.40.50.300 11 229 2.3E-68 T 14-10-2018 JV59_31065 789c5ed35d4ed4bbde1a399d80190ed0 371 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 42 365 7.5E-155 T 14-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 JV59_31950 4ad46556953fd03a1de2393c55605333 237 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 233 2.6E-9 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_31950 4ad46556953fd03a1de2393c55605333 237 Gene3D G3DSA:3.40.190.10 35 234 1.5E-11 T 14-10-2018 JV59_31950 4ad46556953fd03a1de2393c55605333 237 SUPERFAMILY SSF53850 32 234 1.19E-20 T 14-10-2018 JV59_31950 4ad46556953fd03a1de2393c55605333 237 Gene3D G3DSA:3.40.190.10 114 209 1.5E-11 T 14-10-2018 JV59_27230 73aeae0adc49b9cd87d32e4df38a9237 171 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 1 154 2.0E-63 T 14-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 JV59_27230 73aeae0adc49b9cd87d32e4df38a9237 171 Pfam PF17323 Trans-membrane regulatory protein ToxS 21 169 1.2E-73 T 14-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 JV59_16385 13525694f3d5474ff6904162e238e9a4 344 Pfam PF02628 Cytochrome oxidase assembly protein 6 317 2.5E-81 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 JV59_37410 6797414447381e2ff190699ec7af3332 137 Pfam PF06877 Regulator of ribonuclease activity B 18 120 5.0E-35 T 14-10-2018 IPR009671 Regulator of ribonuclease activity B domain JV59_37410 6797414447381e2ff190699ec7af3332 137 SUPERFAMILY SSF89946 8 126 5.23E-40 T 14-10-2018 IPR036701 RraB-like superfamily JV59_37410 6797414447381e2ff190699ec7af3332 137 Gene3D G3DSA:3.30.70.970 1 131 1.9E-59 T 14-10-2018 IPR036701 RraB-like superfamily JV59_37410 6797414447381e2ff190699ec7af3332 137 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 29.909 T 14-10-2018 IPR016716 Regulator of ribonuclease activity B JV59_37410 6797414447381e2ff190699ec7af3332 137 PIRSF PIRSF018193 8 137 5.3E-58 T 14-10-2018 IPR016716 Regulator of ribonuclease activity B JV59_27495 dfa1204d0e0885e38f1c46ba213f9a12 289 Gene3D G3DSA:1.10.8.10 6 90 3.0E-22 T 14-10-2018 JV59_27495 dfa1204d0e0885e38f1c46ba213f9a12 289 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 7 282 41.949 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 JV59_27495 dfa1204d0e0885e38f1c46ba213f9a12 289 Pfam PF13847 Methyltransferase domain 118 247 3.3E-17 T 14-10-2018 IPR025714 Methyltransferase domain JV59_27495 dfa1204d0e0885e38f1c46ba213f9a12 289 Gene3D G3DSA:3.40.50.150 91 283 3.9E-57 T 14-10-2018 JV59_27495 dfa1204d0e0885e38f1c46ba213f9a12 289 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 11 281 2.3E-77 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 JV59_27495 dfa1204d0e0885e38f1c46ba213f9a12 289 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JV59_27495 dfa1204d0e0885e38f1c46ba213f9a12 289 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 278 1.4E-87 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 JV59_27495 dfa1204d0e0885e38f1c46ba213f9a12 289 SUPERFAMILY SSF53335 10 280 2.04E-52 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_28235 468c01937aa9f4d07fa201131b749d7f 101 Gene3D G3DSA:1.10.3990.20 8 101 2.5E-32 T 14-10-2018 IPR038268 Ribbon-helix-helix domain superfamily JV59_28235 468c01937aa9f4d07fa201131b749d7f 101 Pfam PF13467 Ribbon-helix-helix domain 16 83 8.5E-25 T 14-10-2018 IPR027373 Ribbon-helix-helix domain JV59_33535 842bb8f4b6c01bcfdd36d44a330b4ccd 325 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 116 4.6E-19 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 JV59_33535 842bb8f4b6c01bcfdd36d44a330b4ccd 325 SUPERFAMILY SSF55347 125 293 3.43E-18 T 14-10-2018 JV59_33535 842bb8f4b6c01bcfdd36d44a330b4ccd 325 Gene3D G3DSA:3.30.360.10 124 325 4.0E-27 T 14-10-2018 JV59_33535 842bb8f4b6c01bcfdd36d44a330b4ccd 325 Gene3D G3DSA:3.40.50.720 1 118 7.5E-32 T 14-10-2018 JV59_33535 842bb8f4b6c01bcfdd36d44a330b4ccd 325 SUPERFAMILY SSF51735 2 151 7.03E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_18575 901a7c5b986f48545a262e69a5d742c0 193 SUPERFAMILY SSF52172 5 186 1.59E-23 T 14-10-2018 IPR011006 CheY-like superfamily JV59_18575 901a7c5b986f48545a262e69a5d742c0 193 SMART SM01012 131 186 1.4E-18 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 JV59_18575 901a7c5b986f48545a262e69a5d742c0 193 Gene3D G3DSA:1.10.10.10 133 193 1.3E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_18575 901a7c5b986f48545a262e69a5d742c0 193 Pfam PF03861 ANTAR domain 135 186 7.5E-17 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 JV59_16885 50fc6257bc007bee2d633ae367606831 334 Gene3D G3DSA:1.10.287.470 75 108 9.0E-11 T 14-10-2018 JV59_16885 50fc6257bc007bee2d633ae367606831 334 Gene3D G3DSA:2.40.30.170 220 334 6.9E-34 T 14-10-2018 JV59_16885 50fc6257bc007bee2d633ae367606831 334 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 38 284 2.2E-19 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JV59_16885 50fc6257bc007bee2d633ae367606831 334 SUPERFAMILY SSF111369 39 106 7.59E-7 T 14-10-2018 JV59_16885 50fc6257bc007bee2d633ae367606831 334 SUPERFAMILY SSF111369 179 279 7.72E-13 T 14-10-2018 JV59_16885 50fc6257bc007bee2d633ae367606831 334 Gene3D G3DSA:2.40.50.100 42 74 9.0E-11 T 14-10-2018 JV59_16885 50fc6257bc007bee2d633ae367606831 334 Gene3D G3DSA:1.10.287.470 109 176 1.2E-5 T 14-10-2018 JV59_16885 50fc6257bc007bee2d633ae367606831 334 Pfam PF00529 HlyD membrane-fusion protein of T1SS 16 331 1.2E-7 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 JV59_31850 0bed37e3441b1b2f028a006ff7a4c452 396 SUPERFAMILY SSF54506 7 184 1.02E-69 T 14-10-2018 JV59_31850 0bed37e3441b1b2f028a006ff7a4c452 396 Gene3D G3DSA:3.10.310.10 13 387 1.9E-149 T 14-10-2018 JV59_31850 0bed37e3441b1b2f028a006ff7a4c452 396 Pfam PF04303 PrpF protein 8 390 2.3E-173 T 14-10-2018 IPR007400 PrpF protein JV59_31850 0bed37e3441b1b2f028a006ff7a4c452 396 Gene3D G3DSA:3.10.310.10 183 373 1.9E-149 T 14-10-2018 JV59_31850 0bed37e3441b1b2f028a006ff7a4c452 396 SUPERFAMILY SSF54506 188 393 1.32E-75 T 14-10-2018 JV59_31850 0bed37e3441b1b2f028a006ff7a4c452 396 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 7 394 7.0E-224 T 14-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 JV59_29360 b42974440fd37eba875c74b1d3743601 517 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 483 2.7E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_29360 b42974440fd37eba875c74b1d3743601 517 Gene3D G3DSA:1.10.287.950 186 517 9.3E-69 T 14-10-2018 JV59_29360 b42974440fd37eba875c74b1d3743601 517 SMART SM00283 255 516 3.7E-71 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_29360 b42974440fd37eba875c74b1d3743601 517 SMART SM00304 187 240 4.6E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_29360 b42974440fd37eba875c74b1d3743601 517 SUPERFAMILY SSF58104 208 516 9.16E-70 T 14-10-2018 JV59_02315 088ca257f7a03e931a993456255a16f6 355 Pfam PF11798 IMS family HHH motif 171 201 1.8E-5 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 JV59_02315 088ca257f7a03e931a993456255a16f6 355 Pfam PF00817 impB/mucB/samB family 12 159 4.5E-50 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 JV59_02315 088ca257f7a03e931a993456255a16f6 355 Gene3D G3DSA:2.30.40.20 16 74 3.6E-28 T 14-10-2018 JV59_02315 088ca257f7a03e931a993456255a16f6 355 SUPERFAMILY SSF56672 5 239 2.13E-92 T 14-10-2018 JV59_02315 088ca257f7a03e931a993456255a16f6 355 Pfam PF11799 impB/mucB/samB family C-terminal domain 242 342 1.2E-5 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 JV59_02315 088ca257f7a03e931a993456255a16f6 355 SUPERFAMILY SSF100879 246 354 5.1E-24 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 JV59_02315 088ca257f7a03e931a993456255a16f6 355 Gene3D G3DSA:1.10.150.20 175 233 9.0E-14 T 14-10-2018 JV59_02315 088ca257f7a03e931a993456255a16f6 355 Hamap MF_01113 DNA polymerase IV [dinB]. 6 354 36.612 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 JV59_02315 088ca257f7a03e931a993456255a16f6 355 Gene3D G3DSA:3.30.1490.100 242 354 1.1E-24 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 JV59_02315 088ca257f7a03e931a993456255a16f6 355 Gene3D G3DSA:3.30.70.270 75 174 2.6E-38 T 14-10-2018 JV59_38380 e18ac95e5c88c40cdb1f48770bae2c06 389 Gene3D G3DSA:3.90.1150.10 249 387 3.8E-50 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_38380 e18ac95e5c88c40cdb1f48770bae2c06 389 SUPERFAMILY SSF53383 9 383 1.71E-113 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_38380 e18ac95e5c88c40cdb1f48770bae2c06 389 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 383 9.8E-201 T 14-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 JV59_38380 e18ac95e5c88c40cdb1f48770bae2c06 389 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 JV59_38380 e18ac95e5c88c40cdb1f48770bae2c06 389 Gene3D G3DSA:3.40.640.10 3 248 6.2E-81 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_38380 e18ac95e5c88c40cdb1f48770bae2c06 389 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 381 1.9E-134 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 JV59_38380 e18ac95e5c88c40cdb1f48770bae2c06 389 PIRSF PIRSF001434 1 385 1.5E-129 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 JV59_21615 9cf18bc94ba54d4ac73375f578dc7ff0 245 Pfam PF00588 SpoU rRNA Methylase family 102 236 1.2E-29 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 JV59_21615 9cf18bc94ba54d4ac73375f578dc7ff0 245 Gene3D G3DSA:3.30.1330.30 1 93 4.0E-17 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like JV59_21615 9cf18bc94ba54d4ac73375f578dc7ff0 245 Gene3D G3DSA:3.40.1280.10 96 245 8.8E-41 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JV59_21615 9cf18bc94ba54d4ac73375f578dc7ff0 245 SUPERFAMILY SSF55315 4 93 9.65E-12 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like JV59_21615 9cf18bc94ba54d4ac73375f578dc7ff0 245 SUPERFAMILY SSF75217 96 243 4.97E-34 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases JV59_33390 16332f5485c278875e88c604985a4861 1309 Pfam PF04408 Helicase associated domain (HA2) 477 568 1.7E-17 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 JV59_33390 16332f5485c278875e88c604985a4861 1309 Gene3D G3DSA:3.40.50.300 39 264 2.5E-79 T 14-10-2018 JV59_33390 16332f5485c278875e88c604985a4861 1309 Gene3D G3DSA:1.20.120.1080 459 560 2.5E-18 T 14-10-2018 JV59_33390 16332f5485c278875e88c604985a4861 1309 Pfam PF11898 Domain of unknown function (DUF3418) 723 1307 3.1E-230 T 14-10-2018 IPR024590 RNA helicase HrpA, C-terminal JV59_33390 16332f5485c278875e88c604985a4861 1309 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 26 1307 0.0 T 14-10-2018 IPR010222 RNA helicase HrpA GO:0004004 JV59_33390 16332f5485c278875e88c604985a4861 1309 SMART SM00847 475 570 1.1E-36 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 JV59_33390 16332f5485c278875e88c604985a4861 1309 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 634 709 9.1E-22 T 14-10-2018 IPR011709 Domain of unknown function DUF1605 JV59_33390 16332f5485c278875e88c604985a4861 1309 Pfam PF00271 Helicase conserved C-terminal domain 301 414 2.1E-11 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_33390 16332f5485c278875e88c604985a4861 1309 SMART SM00490 315 415 7.7E-15 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_33390 16332f5485c278875e88c604985a4861 1309 Gene3D G3DSA:3.40.50.300 265 432 3.1E-55 T 14-10-2018 JV59_33390 16332f5485c278875e88c604985a4861 1309 SMART SM00382 104 395 1.5E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_33390 16332f5485c278875e88c604985a4861 1309 SUPERFAMILY SSF52540 86 612 3.69E-115 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_33390 16332f5485c278875e88c604985a4861 1309 SMART SM00487 87 271 1.1E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JV59_33390 16332f5485c278875e88c604985a4861 1309 Pfam PF00270 DEAD/DEAH box helicase 99 245 5.4E-8 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JV59_33435 cbea0c4955e14aa518c89cf732c25587 935 SUPERFAMILY SSF53067 222 456 3.96E-22 T 14-10-2018 JV59_33435 cbea0c4955e14aa518c89cf732c25587 935 SUPERFAMILY SSF53067 6 209 6.69E-29 T 14-10-2018 JV59_33435 cbea0c4955e14aa518c89cf732c25587 935 Gene3D G3DSA:3.30.420.40 6 226 4.4E-28 T 14-10-2018 JV59_33435 cbea0c4955e14aa518c89cf732c25587 935 Pfam PF00012 Hsp70 protein 90 305 3.0E-16 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_33435 cbea0c4955e14aa518c89cf732c25587 935 PRINTS PR00301 70kDa heat shock protein signature 165 185 1.0E-7 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_33435 cbea0c4955e14aa518c89cf732c25587 935 PRINTS PR00301 70kDa heat shock protein signature 232 242 1.0E-7 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_33435 cbea0c4955e14aa518c89cf732c25587 935 PRINTS PR00301 70kDa heat shock protein signature 6 19 1.0E-7 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_33435 cbea0c4955e14aa518c89cf732c25587 935 Pfam PF12531 DNA-K related protein 685 932 1.7E-100 T 14-10-2018 IPR021030 Protein of unknown function DUF3731 JV59_21140 ae8405d00b01b95d0981cb1b646f60ef 126 SUPERFAMILY SSF51230 3 125 2.09E-43 T 14-10-2018 IPR011053 Single hybrid motif JV59_21140 ae8405d00b01b95d0981cb1b646f60ef 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 126 3.5E-51 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 JV59_21140 ae8405d00b01b95d0981cb1b646f60ef 126 Gene3D G3DSA:2.40.50.100 1 126 2.6E-48 T 14-10-2018 JV59_21140 ae8405d00b01b95d0981cb1b646f60ef 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 2 124 39.819 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 JV59_21140 ae8405d00b01b95d0981cb1b646f60ef 126 Pfam PF01597 Glycine cleavage H-protein 5 125 5.5E-49 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate JV59_35925 1751f157d4becb4190f7666026b92e9e 386 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 40.946 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB JV59_35925 1751f157d4becb4190f7666026b92e9e 386 SUPERFAMILY SSF50998 33 374 8.32E-81 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily JV59_35925 1751f157d4becb4190f7666026b92e9e 386 Pfam PF13360 PQQ-like domain 76 310 5.9E-52 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat JV59_35925 1751f157d4becb4190f7666026b92e9e 386 SMART SM00564 63 94 0.0014 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat JV59_35925 1751f157d4becb4190f7666026b92e9e 386 SMART SM00564 192 223 58.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat JV59_35925 1751f157d4becb4190f7666026b92e9e 386 SMART SM00564 147 178 8.0E-4 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat JV59_35925 1751f157d4becb4190f7666026b92e9e 386 SMART SM00564 243 274 0.21 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat JV59_35925 1751f157d4becb4190f7666026b92e9e 386 SMART SM00564 281 312 8.1 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat JV59_35925 1751f157d4becb4190f7666026b92e9e 386 SMART SM00564 106 138 0.02 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat JV59_35925 1751f157d4becb4190f7666026b92e9e 386 SMART SM00564 321 353 0.014 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat JV59_35925 1751f157d4becb4190f7666026b92e9e 386 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 7 382 1.4E-138 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB JV59_35925 1751f157d4becb4190f7666026b92e9e 386 Gene3D G3DSA:2.130.10.10 18 385 6.0E-98 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 JV59_03210 911d529268a35729d6af512cc1dc8a30 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 JV59_03210 911d529268a35729d6af512cc1dc8a30 362 Pfam PF03462 PCRF domain 13 205 9.1E-78 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 JV59_03210 911d529268a35729d6af512cc1dc8a30 362 SMART SM00937 67 180 5.1E-69 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 JV59_03210 911d529268a35729d6af512cc1dc8a30 362 Gene3D G3DSA:3.30.160.20 212 293 3.7E-94 T 14-10-2018 JV59_03210 911d529268a35729d6af512cc1dc8a30 362 Gene3D G3DSA:1.20.58.410 3 104 2.0E-9 T 14-10-2018 JV59_03210 911d529268a35729d6af512cc1dc8a30 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 360 5.6E-171 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 JV59_03210 911d529268a35729d6af512cc1dc8a30 362 Pfam PF00472 RF-1 domain 218 323 3.1E-39 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 JV59_03210 911d529268a35729d6af512cc1dc8a30 362 SUPERFAMILY SSF75620 12 355 4.71E-136 T 14-10-2018 JV59_03210 911d529268a35729d6af512cc1dc8a30 362 Gene3D G3DSA:3.30.70.1660 115 342 3.7E-94 T 14-10-2018 JV59_03210 911d529268a35729d6af512cc1dc8a30 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.894 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 JV59_01805 3e455d90eaa9f3ad336ebb6d4f24512b 175 SUPERFAMILY SSF55718 44 139 3.3E-20 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily JV59_01805 3e455d90eaa9f3ad336ebb6d4f24512b 175 PIRSF PIRSF025550 1 174 1.7E-82 T 14-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT JV59_01805 3e455d90eaa9f3ad336ebb6d4f24512b 175 Gene3D G3DSA:3.30.1050.10 7 137 1.0E-6 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily JV59_01805 3e455d90eaa9f3ad336ebb6d4f24512b 175 Pfam PF02036 SCP-2 sterol transfer family 42 134 1.1E-19 T 14-10-2018 IPR003033 SCP2 sterol-binding domain JV59_35300 ab6c25095958f6c21615793161bbfaa1 177 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 41 168 4.0E-46 T 14-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 JV59_35300 ab6c25095958f6c21615793161bbfaa1 177 SUPERFAMILY SSF52833 51 171 3.86E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_35300 ab6c25095958f6c21615793161bbfaa1 177 Gene3D G3DSA:3.40.30.10 26 176 5.4E-31 T 14-10-2018 JV59_35300 ab6c25095958f6c21615793161bbfaa1 177 Pfam PF08534 Redoxin 51 157 4.6E-14 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 JV59_24600 e1d7fffc2eeaf8ca4fba18b913fae5ad 160 Pfam PF04073 Aminoacyl-tRNA editing domain 31 147 4.3E-27 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 JV59_24600 e1d7fffc2eeaf8ca4fba18b913fae5ad 160 SUPERFAMILY SSF55826 11 158 4.97E-32 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 JV59_24600 e1d7fffc2eeaf8ca4fba18b913fae5ad 160 Gene3D G3DSA:3.90.960.10 5 160 1.7E-38 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 JV59_34610 aefed9e66c2ee818bda5cfdbd11f705c 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 40.378 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JV59_34610 aefed9e66c2ee818bda5cfdbd11f705c 435 SUPERFAMILY SSF55681 118 429 3.62E-98 T 14-10-2018 JV59_34610 aefed9e66c2ee818bda5cfdbd11f705c 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 411 3.4E-35 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_34610 aefed9e66c2ee818bda5cfdbd11f705c 435 Gene3D G3DSA:3.30.930.10 107 434 4.5E-114 T 14-10-2018 JV59_34610 aefed9e66c2ee818bda5cfdbd11f705c 435 PIRSF PIRSF001529 1 435 4.6E-187 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JV59_34610 aefed9e66c2ee818bda5cfdbd11f705c 435 Gene3D G3DSA:1.10.287.40 1 106 1.4E-20 T 14-10-2018 JV59_34610 aefed9e66c2ee818bda5cfdbd11f705c 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 1.5E-173 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JV59_34610 aefed9e66c2ee818bda5cfdbd11f705c 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 1.6E-29 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 JV59_34610 aefed9e66c2ee818bda5cfdbd11f705c 435 SUPERFAMILY SSF46589 1 114 3.24E-28 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 JV59_34610 aefed9e66c2ee818bda5cfdbd11f705c 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 2.8E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JV59_34610 aefed9e66c2ee818bda5cfdbd11f705c 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 2.8E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JV59_34610 aefed9e66c2ee818bda5cfdbd11f705c 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 2.8E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JV59_34610 aefed9e66c2ee818bda5cfdbd11f705c 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 2.8E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JV59_34610 aefed9e66c2ee818bda5cfdbd11f705c 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 2.8E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JV59_29745 141624e6cced8fb27c24f83caf2e8aaa 331 Gene3D G3DSA:3.40.190.170 22 331 1.6E-99 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily JV59_29745 141624e6cced8fb27c24f83caf2e8aaa 331 PIRSF PIRSF006470 1 330 2.9E-95 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 JV59_29745 141624e6cced8fb27c24f83caf2e8aaa 331 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 29 285 3.6E-75 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 JV59_29745 141624e6cced8fb27c24f83caf2e8aaa 331 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 30 308 4.2E-86 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 JV59_15955 ca4ef07c98ec1ba53d7fe076bc2e8096 309 SUPERFAMILY SSF161098 105 290 5.89E-25 T 14-10-2018 IPR035906 MetI-like superfamily JV59_15955 ca4ef07c98ec1ba53d7fe076bc2e8096 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 126 307 4.4E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_15955 ca4ef07c98ec1ba53d7fe076bc2e8096 309 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 65 7.3E-14 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain JV59_15955 ca4ef07c98ec1ba53d7fe076bc2e8096 309 Gene3D G3DSA:1.10.3720.10 98 307 6.2E-17 T 14-10-2018 IPR035906 MetI-like superfamily JV59_01360 05383bd4d247d24fc00f5fc87b3d6280 303 Gene3D G3DSA:2.70.70.10 166 302 1.9E-37 T 14-10-2018 IPR011055 Duplicated hybrid motif JV59_01360 05383bd4d247d24fc00f5fc87b3d6280 303 Gene3D G3DSA:3.10.350.10 35 98 3.3E-12 T 14-10-2018 IPR036779 LysM domain superfamily JV59_01360 05383bd4d247d24fc00f5fc87b3d6280 303 Pfam PF01476 LysM domain 48 90 5.2E-12 T 14-10-2018 IPR018392 LysM domain JV59_01360 05383bd4d247d24fc00f5fc87b3d6280 303 Pfam PF01551 Peptidase family M23 204 298 6.8E-32 T 14-10-2018 IPR016047 Peptidase M23 JV59_01360 05383bd4d247d24fc00f5fc87b3d6280 303 SMART SM00257 47 91 2.5E-11 T 14-10-2018 IPR018392 LysM domain JV59_01360 05383bd4d247d24fc00f5fc87b3d6280 303 SUPERFAMILY SSF51261 47 302 8.89E-52 T 14-10-2018 IPR011055 Duplicated hybrid motif JV59_17400 df8772e585d1e7c6de41dc65411ebfb3 456 SMART SM00729 61 284 3.2E-38 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JV59_17400 df8772e585d1e7c6de41dc65411ebfb3 456 Gene3D G3DSA:3.80.30.20 36 363 3.1E-76 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe JV59_17400 df8772e585d1e7c6de41dc65411ebfb3 456 Pfam PF04055 Radical SAM superfamily 66 235 1.3E-12 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JV59_17400 df8772e585d1e7c6de41dc65411ebfb3 456 SUPERFAMILY SSF102114 56 438 8.76E-85 T 14-10-2018 JV59_17400 df8772e585d1e7c6de41dc65411ebfb3 456 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 22 442 6.5E-182 T 14-10-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW JV59_36620 f45d3bee0af9cafba392bf200f13222c 369 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 368 41.587 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 JV59_36620 f45d3bee0af9cafba392bf200f13222c 369 Gene3D G3DSA:3.30.420.40 11 363 6.6E-133 T 14-10-2018 JV59_36620 f45d3bee0af9cafba392bf200f13222c 369 SUPERFAMILY SSF53067 5 342 1.42E-25 T 14-10-2018 JV59_36620 f45d3bee0af9cafba392bf200f13222c 369 Gene3D G3DSA:3.30.420.40 145 328 6.6E-133 T 14-10-2018 JV59_36620 f45d3bee0af9cafba392bf200f13222c 369 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 5 367 3.4E-165 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 JV59_33165 801d44755f8444a67b12cbb9b3fba2b1 411 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 3 403 7.3E-161 T 14-10-2018 IPR011340 Cysteine desulfurase-related JV59_33165 801d44755f8444a67b12cbb9b3fba2b1 411 Gene3D G3DSA:3.90.1150.10 24 403 8.9E-133 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_33165 801d44755f8444a67b12cbb9b3fba2b1 411 Pfam PF00266 Aminotransferase class-V 26 401 1.3E-69 T 14-10-2018 IPR000192 Aminotransferase class V domain JV59_33165 801d44755f8444a67b12cbb9b3fba2b1 411 SUPERFAMILY SSF53383 5 408 5.11E-94 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_33165 801d44755f8444a67b12cbb9b3fba2b1 411 Gene3D G3DSA:3.40.640.10 33 289 8.9E-133 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_34210 26c3f353720e922c5fb1c256271f44fa 573 SUPERFAMILY SSF53300 368 550 2.07E-10 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JV59_34210 26c3f353720e922c5fb1c256271f44fa 573 PIRSF PIRSF031715 1 237 8.3E-15 T 14-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 JV59_34210 26c3f353720e922c5fb1c256271f44fa 573 PIRSF PIRSF031715 243 573 3.5E-71 T 14-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 JV59_34210 26c3f353720e922c5fb1c256271f44fa 573 Gene3D G3DSA:3.40.50.410 368 551 7.0E-7 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JV59_34210 26c3f353720e922c5fb1c256271f44fa 573 Pfam PF11775 Cobalamin biosynthesis protein CobT VWA domain 365 565 1.2E-42 T 14-10-2018 IPR025861 Cobalamin biosynthesis protein CobT VWA domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 JV59_34210 26c3f353720e922c5fb1c256271f44fa 573 Pfam PF06213 Cobalamin biosynthesis protein CobT 17 226 3.5E-17 T 14-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 JV59_19480 a2d4e8d3cb529899d490e0c552644302 434 Gene3D G3DSA:3.50.50.60 2 71 1.7E-7 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_19480 a2d4e8d3cb529899d490e0c552644302 434 SUPERFAMILY SSF51905 1 424 1.51E-18 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_19480 a2d4e8d3cb529899d490e0c552644302 434 PIRSF PIRSF000141 1 430 1.7E-170 T 14-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 JV59_19480 a2d4e8d3cb529899d490e0c552644302 434 Pfam PF00890 FAD binding domain 4 411 2.9E-53 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_19480 a2d4e8d3cb529899d490e0c552644302 434 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 427 45.178 T 14-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 JV59_19480 a2d4e8d3cb529899d490e0c552644302 434 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 424 1.6E-172 T 14-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 JV59_01715 a416a14067b6fb1b144932a02a24e19f 157 Gene3D G3DSA:3.10.50.30 75 157 3.7E-30 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 JV59_01715 a416a14067b6fb1b144932a02a24e19f 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 1.7E-54 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 JV59_01715 a416a14067b6fb1b144932a02a24e19f 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 32.184 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 JV59_01715 a416a14067b6fb1b144932a02a24e19f 157 SUPERFAMILY SSF46557 2 75 7.46E-26 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 JV59_01715 a416a14067b6fb1b144932a02a24e19f 157 PIRSF PIRSF006092 1 157 2.3E-48 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 JV59_01715 a416a14067b6fb1b144932a02a24e19f 157 Gene3D G3DSA:1.10.287.180 1 74 5.2E-26 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 JV59_01715 a416a14067b6fb1b144932a02a24e19f 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 7.5E-28 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 JV59_01715 a416a14067b6fb1b144932a02a24e19f 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 2.4E-25 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 JV59_01715 a416a14067b6fb1b144932a02a24e19f 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 JV59_01715 a416a14067b6fb1b144932a02a24e19f 157 SUPERFAMILY SSF54534 81 156 7.06E-24 T 14-10-2018 JV59_01715 a416a14067b6fb1b144932a02a24e19f 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 JV59_20280 04aa24b7bd5d88186d93d0be43a7b3b7 506 Gene3D G3DSA:3.40.605.10 10 269 4.3E-89 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JV59_20280 04aa24b7bd5d88186d93d0be43a7b3b7 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JV59_20280 04aa24b7bd5d88186d93d0be43a7b3b7 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 JV59_20280 04aa24b7bd5d88186d93d0be43a7b3b7 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 4.1E-165 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JV59_20280 04aa24b7bd5d88186d93d0be43a7b3b7 506 Gene3D G3DSA:3.40.309.10 270 501 7.5E-75 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JV59_20280 04aa24b7bd5d88186d93d0be43a7b3b7 506 SUPERFAMILY SSF53720 13 497 1.3E-162 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JV59_19315 b1d44600631ba70cf7f27c8eb3e4981a 192 SUPERFAMILY SSF48695 15 191 3.88E-55 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily JV59_19315 b1d44600631ba70cf7f27c8eb3e4981a 192 PIRSF PIRSF000013 1 192 2.7E-91 T 14-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 JV59_19315 b1d44600631ba70cf7f27c8eb3e4981a 192 Gene3D G3DSA:1.10.3820.10 11 188 1.8E-32 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily JV59_19315 b1d44600631ba70cf7f27c8eb3e4981a 192 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 185 3.3E-69 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal JV59_28240 b45199031e00749819d1df3802e0ca70 525 Gene3D G3DSA:1.10.1200.140 388 444 9.9E-25 T 14-10-2018 JV59_28240 b45199031e00749819d1df3802e0ca70 525 Gene3D G3DSA:3.40.720.10 24 380 3.9E-138 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 JV59_28240 b45199031e00749819d1df3802e0ca70 525 Gene3D G3DSA:3.40.720.10 462 525 2.0E-7 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 JV59_28240 b45199031e00749819d1df3802e0ca70 525 PRINTS PR00113 Alkaline phosphatase signature 267 296 6.2E-37 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 JV59_28240 b45199031e00749819d1df3802e0ca70 525 PRINTS PR00113 Alkaline phosphatase signature 85 100 6.2E-37 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 JV59_28240 b45199031e00749819d1df3802e0ca70 525 PRINTS PR00113 Alkaline phosphatase signature 26 46 6.2E-37 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 JV59_28240 b45199031e00749819d1df3802e0ca70 525 PRINTS PR00113 Alkaline phosphatase signature 166 176 6.2E-37 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 JV59_28240 b45199031e00749819d1df3802e0ca70 525 PRINTS PR00113 Alkaline phosphatase signature 122 142 6.2E-37 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 JV59_28240 b45199031e00749819d1df3802e0ca70 525 ProSitePatterns PS00123 Alkaline phosphatase active site. 85 93 - T 14-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 JV59_28240 b45199031e00749819d1df3802e0ca70 525 SUPERFAMILY SSF53649 11 505 1.9E-112 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 JV59_28240 b45199031e00749819d1df3802e0ca70 525 SMART SM00098 27 432 5.4E-52 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 JV59_28240 b45199031e00749819d1df3802e0ca70 525 Pfam PF00245 Alkaline phosphatase 26 436 2.4E-83 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 JV59_26710 94af73950f5e6c7519e3bc663331f280 257 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 JV59_26710 94af73950f5e6c7519e3bc663331f280 257 Gene3D G3DSA:3.20.20.140 1 256 4.8E-84 T 14-10-2018 JV59_26710 94af73950f5e6c7519e3bc663331f280 257 Pfam PF01026 TatD related DNase 4 253 1.7E-65 T 14-10-2018 IPR001130 TatD family GO:0016788 JV59_26710 94af73950f5e6c7519e3bc663331f280 257 SUPERFAMILY SSF51556 3 255 6.33E-77 T 14-10-2018 IPR032466 Metal-dependent hydrolase JV59_26710 94af73950f5e6c7519e3bc663331f280 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 JV59_26710 94af73950f5e6c7519e3bc663331f280 257 PIRSF PIRSF005902 1 257 2.8E-68 T 14-10-2018 IPR001130 TatD family GO:0016788 JV59_20620 9380a7858bda3ae665df205528f4a81c 725 Gene3D G3DSA:1.10.420.10 578 699 1.9E-148 T 14-10-2018 JV59_20620 9380a7858bda3ae665df205528f4a81c 725 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 11 724 0.0 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 JV59_20620 9380a7858bda3ae665df205528f4a81c 725 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 1.9E-51 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 JV59_20620 9380a7858bda3ae665df205528f4a81c 725 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 1.9E-51 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 JV59_20620 9380a7858bda3ae665df205528f4a81c 725 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 1.9E-51 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 JV59_20620 9380a7858bda3ae665df205528f4a81c 725 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 1.9E-51 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 JV59_20620 9380a7858bda3ae665df205528f4a81c 725 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 1.9E-51 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 JV59_20620 9380a7858bda3ae665df205528f4a81c 725 Gene3D G3DSA:1.10.520.10 433 723 1.9E-148 T 14-10-2018 JV59_20620 9380a7858bda3ae665df205528f4a81c 725 Gene3D G3DSA:1.10.420.20 191 397 2.7E-216 T 14-10-2018 JV59_20620 9380a7858bda3ae665df205528f4a81c 725 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 7.3E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 JV59_20620 9380a7858bda3ae665df205528f4a81c 725 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 7.3E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 JV59_20620 9380a7858bda3ae665df205528f4a81c 725 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 7.3E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 JV59_20620 9380a7858bda3ae665df205528f4a81c 725 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 7.3E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 JV59_20620 9380a7858bda3ae665df205528f4a81c 725 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 7.3E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 JV59_20620 9380a7858bda3ae665df205528f4a81c 725 SUPERFAMILY SSF48113 20 431 2.21E-153 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 JV59_20620 9380a7858bda3ae665df205528f4a81c 725 Gene3D G3DSA:1.10.520.10 28 432 2.7E-216 T 14-10-2018 JV59_20620 9380a7858bda3ae665df205528f4a81c 725 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 14-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 JV59_20620 9380a7858bda3ae665df205528f4a81c 725 Pfam PF00141 Peroxidase 69 398 2.2E-52 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 JV59_20620 9380a7858bda3ae665df205528f4a81c 725 Pfam PF00141 Peroxidase 405 698 5.7E-36 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 JV59_20620 9380a7858bda3ae665df205528f4a81c 725 SUPERFAMILY SSF48113 432 723 6.63E-110 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 JV59_20620 9380a7858bda3ae665df205528f4a81c 725 Hamap MF_01961 Catalase-peroxidase [katG]. 7 724 40.012 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 JV59_02560 8a10d358894ea28cf605f9d7e382c1f5 521 Gene3D G3DSA:1.10.530.10 104 256 1.1E-28 T 14-10-2018 JV59_02560 8a10d358894ea28cf605f9d7e382c1f5 521 SUPERFAMILY SSF53955 107 260 2.81E-41 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily JV59_02560 8a10d358894ea28cf605f9d7e382c1f5 521 Gene3D G3DSA:3.10.350.10 466 516 2.1E-14 T 14-10-2018 IPR036779 LysM domain superfamily JV59_02560 8a10d358894ea28cf605f9d7e382c1f5 521 Gene3D G3DSA:3.10.350.10 409 462 2.7E-16 T 14-10-2018 IPR036779 LysM domain superfamily JV59_02560 8a10d358894ea28cf605f9d7e382c1f5 521 SUPERFAMILY SSF54106 411 456 1.09E-11 T 14-10-2018 JV59_02560 8a10d358894ea28cf605f9d7e382c1f5 521 Gene3D G3DSA:3.10.350.10 326 394 1.0E-14 T 14-10-2018 IPR036779 LysM domain superfamily JV59_02560 8a10d358894ea28cf605f9d7e382c1f5 521 SUPERFAMILY SSF54106 337 381 7.59E-11 T 14-10-2018 JV59_02560 8a10d358894ea28cf605f9d7e382c1f5 521 Pfam PF01476 LysM domain 413 456 6.4E-13 T 14-10-2018 IPR018392 LysM domain JV59_02560 8a10d358894ea28cf605f9d7e382c1f5 521 Pfam PF01476 LysM domain 470 512 2.6E-13 T 14-10-2018 IPR018392 LysM domain JV59_02560 8a10d358894ea28cf605f9d7e382c1f5 521 Pfam PF01476 LysM domain 339 381 1.7E-12 T 14-10-2018 IPR018392 LysM domain JV59_02560 8a10d358894ea28cf605f9d7e382c1f5 521 SMART SM00257 412 456 6.2E-15 T 14-10-2018 IPR018392 LysM domain JV59_02560 8a10d358894ea28cf605f9d7e382c1f5 521 SMART SM00257 469 513 1.7E-12 T 14-10-2018 IPR018392 LysM domain JV59_02560 8a10d358894ea28cf605f9d7e382c1f5 521 SMART SM00257 338 381 4.4E-13 T 14-10-2018 IPR018392 LysM domain JV59_02560 8a10d358894ea28cf605f9d7e382c1f5 521 SUPERFAMILY SSF54106 467 514 9.81E-11 T 14-10-2018 JV59_02560 8a10d358894ea28cf605f9d7e382c1f5 521 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 128 156 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 JV59_02560 8a10d358894ea28cf605f9d7e382c1f5 521 Pfam PF01464 Transglycosylase SLT domain 120 221 4.0E-22 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 JV59_28470 b7c9e819bb551f311fe5b569d45997fd 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 1.4E-105 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_28470 b7c9e819bb551f311fe5b569d45997fd 592 SUPERFAMILY SSF50249 1 105 6.09E-34 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_28470 b7c9e819bb551f311fe5b569d45997fd 592 Pfam PF02938 GAD domain 307 406 6.4E-31 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 JV59_28470 b7c9e819bb551f311fe5b569d45997fd 592 SUPERFAMILY SSF55261 288 419 1.52E-46 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 JV59_28470 b7c9e819bb551f311fe5b569d45997fd 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.255 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 JV59_28470 b7c9e819bb551f311fe5b569d45997fd 592 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 6.8E-16 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 JV59_28470 b7c9e819bb551f311fe5b569d45997fd 592 Gene3D G3DSA:3.30.930.10 118 578 3.9E-196 T 14-10-2018 JV59_28470 b7c9e819bb551f311fe5b569d45997fd 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 2.2E-266 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 JV59_28470 b7c9e819bb551f311fe5b569d45997fd 592 SUPERFAMILY SSF55681 108 583 5.77E-102 T 14-10-2018 JV59_28470 b7c9e819bb551f311fe5b569d45997fd 592 Gene3D G3DSA:3.30.1360.30 271 420 3.9E-196 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 JV59_28470 b7c9e819bb551f311fe5b569d45997fd 592 Gene3D G3DSA:2.40.50.140 1 106 2.1E-34 T 14-10-2018 JV59_28470 b7c9e819bb551f311fe5b569d45997fd 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 3.0E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_28470 b7c9e819bb551f311fe5b569d45997fd 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 3.0E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_28470 b7c9e819bb551f311fe5b569d45997fd 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 3.0E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_28470 b7c9e819bb551f311fe5b569d45997fd 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 3.0E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_32210 2beb5046d0e51ea29f4a0b9debc81c8c 907 Pfam PF10145 Phage-related minor tail protein 295 488 1.5E-24 T 14-10-2018 IPR010090 Phage tail tape measure protein JV59_32210 2beb5046d0e51ea29f4a0b9debc81c8c 907 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 23 242 3.0E-5 T 14-10-2018 JV59_32210 2beb5046d0e51ea29f4a0b9debc81c8c 907 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 247 599 5.6E-46 T 14-10-2018 IPR010090 Phage tail tape measure protein JV59_06345 bcfab2255e2f9dcd5f1763ab81a9e159 378 Gene3D G3DSA:3.90.1510.10 42 277 1.2E-139 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 JV59_06345 bcfab2255e2f9dcd5f1763ab81a9e159 378 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 376 8.5E-157 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 JV59_06345 bcfab2255e2f9dcd5f1763ab81a9e159 378 SUPERFAMILY SSF110738 1 376 1.83E-138 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 JV59_06345 bcfab2255e2f9dcd5f1763ab81a9e159 378 Pfam PF02595 Glycerate kinase family 3 374 7.0E-149 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 JV59_06345 bcfab2255e2f9dcd5f1763ab81a9e159 378 PIRSF PIRSF006078 1 378 6.2E-135 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 JV59_06345 bcfab2255e2f9dcd5f1763ab81a9e159 378 Gene3D G3DSA:3.40.50.10350 1 363 1.2E-139 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold JV59_20615 3c867a5bd38757f05411be547333a0b2 205 SUPERFAMILY SSF47616 81 197 3.76E-19 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily JV59_20615 3c867a5bd38757f05411be547333a0b2 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 125 190 2.1E-7 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal JV59_20615 3c867a5bd38757f05411be547333a0b2 205 SUPERFAMILY SSF52833 2 77 2.77E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_20615 3c867a5bd38757f05411be547333a0b2 205 Gene3D G3DSA:1.20.1050.10 84 198 1.8E-33 T 14-10-2018 JV59_20615 3c867a5bd38757f05411be547333a0b2 205 Gene3D G3DSA:3.40.30.10 1 83 1.6E-33 T 14-10-2018 JV59_20615 3c867a5bd38757f05411be547333a0b2 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 73 4.6E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 JV59_24885 a8c796e229b6602ecc94b03bf8d91fea 483 SUPERFAMILY SSF56024 235 388 9.42E-17 T 14-10-2018 JV59_24885 a8c796e229b6602ecc94b03bf8d91fea 483 Gene3D G3DSA:3.30.870.10 27 189 1.9E-30 T 14-10-2018 JV59_24885 a8c796e229b6602ecc94b03bf8d91fea 483 Gene3D G3DSA:3.30.870.10 231 392 7.0E-23 T 14-10-2018 JV59_24885 a8c796e229b6602ecc94b03bf8d91fea 483 SUPERFAMILY SSF56024 40 189 1.7E-20 T 14-10-2018 JV59_24885 a8c796e229b6602ecc94b03bf8d91fea 483 Pfam PF13091 PLD-like domain 46 187 1.2E-14 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 JV59_24885 a8c796e229b6602ecc94b03bf8d91fea 483 Pfam PF13091 PLD-like domain 244 386 6.0E-14 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 JV59_24885 a8c796e229b6602ecc94b03bf8d91fea 483 SMART SM00155 334 360 7.0E-4 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 JV59_24885 a8c796e229b6602ecc94b03bf8d91fea 483 SMART SM00155 120 147 0.066 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 JV59_30630 25dc95640a01f7be259108a85ce1b9c6 430 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 7 351 1.6E-117 T 14-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase JV59_30630 25dc95640a01f7be259108a85ce1b9c6 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 1.4E-5 T 14-10-2018 JV59_30630 25dc95640a01f7be259108a85ce1b9c6 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 1.4E-5 T 14-10-2018 JV59_30630 25dc95640a01f7be259108a85ce1b9c6 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 203 221 1.4E-5 T 14-10-2018 JV59_30630 25dc95640a01f7be259108a85ce1b9c6 430 SUPERFAMILY SSF51905 6 252 1.02E-19 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_30630 25dc95640a01f7be259108a85ce1b9c6 430 Gene3D G3DSA:3.50.50.60 8 429 6.2E-151 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_17925 0c4602a06f6d128879eba20137731584 304 Pfam PF13407 Periplasmic binding protein domain 74 276 4.4E-27 T 14-10-2018 IPR025997 Periplasmic binding protein JV59_17925 0c4602a06f6d128879eba20137731584 304 SUPERFAMILY SSF53822 69 297 6.42E-33 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_17925 0c4602a06f6d128879eba20137731584 304 Gene3D G3DSA:3.40.50.2300 74 288 1.3E-35 T 14-10-2018 JV59_17925 0c4602a06f6d128879eba20137731584 304 Gene3D G3DSA:3.40.50.2300 121 294 1.3E-35 T 14-10-2018 JV59_31115 a4d7912bfbc3fdaac13a9ea3b6026fa3 326 SUPERFAMILY SSF46626 241 323 2.47E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_31115 a4d7912bfbc3fdaac13a9ea3b6026fa3 326 PRINTS PR00605 Class IC cytochrome C signature 295 317 1.8E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 JV59_31115 a4d7912bfbc3fdaac13a9ea3b6026fa3 326 PRINTS PR00605 Class IC cytochrome C signature 166 177 1.8E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 JV59_31115 a4d7912bfbc3fdaac13a9ea3b6026fa3 326 Gene3D G3DSA:1.20.58.1490 1 93 4.2E-34 T 14-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily JV59_31115 a4d7912bfbc3fdaac13a9ea3b6026fa3 326 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 38 83 4.5E-23 T 14-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal JV59_31115 a4d7912bfbc3fdaac13a9ea3b6026fa3 326 PIRSF PIRSF000006 1 324 1.6E-107 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III JV59_31115 a4d7912bfbc3fdaac13a9ea3b6026fa3 326 Gene3D G3DSA:1.10.760.10 211 297 7.1E-73 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_31115 a4d7912bfbc3fdaac13a9ea3b6026fa3 326 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 115 323 4.6E-57 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III JV59_31115 a4d7912bfbc3fdaac13a9ea3b6026fa3 326 SUPERFAMILY SSF46626 55 239 6.88E-30 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_31115 a4d7912bfbc3fdaac13a9ea3b6026fa3 326 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 243 317 4.7E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_31115 a4d7912bfbc3fdaac13a9ea3b6026fa3 326 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 156 229 3.5E-13 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_31115 a4d7912bfbc3fdaac13a9ea3b6026fa3 326 Gene3D G3DSA:1.10.760.10 145 320 7.1E-73 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_36270 e1d4c90646055072aa2af906e35b71cb 338 Pfam PF12706 Beta-lactamase superfamily domain 93 286 4.3E-43 T 14-10-2018 IPR001279 Metallo-beta-lactamase JV59_36270 e1d4c90646055072aa2af906e35b71cb 338 Gene3D G3DSA:3.60.15.10 51 330 2.4E-80 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JV59_36270 e1d4c90646055072aa2af906e35b71cb 338 SUPERFAMILY SSF56281 77 304 4.98E-33 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JV59_36270 e1d4c90646055072aa2af906e35b71cb 338 PIRSF PIRSF038896 19 337 6.3E-92 T 14-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 JV59_20325 4c4373841f1e4ad8e74c93d1fce95e8f 162 SUPERFAMILY SSF54364 4 69 9.02E-25 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 JV59_20325 4c4373841f1e4ad8e74c93d1fce95e8f 162 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 4 67 4.4E-26 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 JV59_20325 4c4373841f1e4ad8e74c93d1fce95e8f 162 Gene3D G3DSA:3.30.110.10 67 162 4.3E-39 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 JV59_20325 4c4373841f1e4ad8e74c93d1fce95e8f 162 SUPERFAMILY SSF55200 74 162 6.02E-35 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 JV59_20325 4c4373841f1e4ad8e74c93d1fce95e8f 162 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 74 160 2.1E-37 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 JV59_20325 4c4373841f1e4ad8e74c93d1fce95e8f 162 ProSitePatterns PS00938 Initiation factor 3 signature. 49 62 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 JV59_20325 4c4373841f1e4ad8e74c93d1fce95e8f 162 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 4 162 3.8E-70 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 JV59_20325 4c4373841f1e4ad8e74c93d1fce95e8f 162 Gene3D G3DSA:3.10.20.80 1 66 4.0E-27 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 JV59_20325 4c4373841f1e4ad8e74c93d1fce95e8f 162 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 162 27.803 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 JV59_20235 1f85818509d749b926a7a433365bf055 149 SUPERFAMILY SSF55961 2 146 1.2E-17 T 14-10-2018 JV59_20235 1f85818509d749b926a7a433365bf055 149 Gene3D G3DSA:3.30.530.20 1 149 2.0E-16 T 14-10-2018 IPR023393 START-like domain superfamily JV59_31085 7f5325775abd468920252916ec30287d 310 SUPERFAMILY SSF52402 29 259 8.19E-56 T 14-10-2018 JV59_31085 7f5325775abd468920252916ec30287d 310 Pfam PF01171 PP-loop family 43 203 3.4E-14 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 JV59_31085 7f5325775abd468920252916ec30287d 310 PIRSF PIRSF004976 2 273 8.2E-76 T 14-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 JV59_31085 7f5325775abd468920252916ec30287d 310 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 11 270 57.811 T 14-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 JV59_31085 7f5325775abd468920252916ec30287d 310 Gene3D G3DSA:3.40.50.620 3 267 3.8E-49 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_37095 a629230fe18b65cbdd117a319caa3b9e 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 JV59_37095 a629230fe18b65cbdd117a319caa3b9e 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 50.925 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 JV59_37095 a629230fe18b65cbdd117a319caa3b9e 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 3.6E-136 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 JV59_37095 a629230fe18b65cbdd117a319caa3b9e 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 356 4.1E-164 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 JV59_37095 a629230fe18b65cbdd117a319caa3b9e 363 SUPERFAMILY SSF53659 4 361 7.56E-123 T 14-10-2018 JV59_37095 a629230fe18b65cbdd117a319caa3b9e 363 SMART SM01329 7 356 4.7E-201 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 JV59_37095 a629230fe18b65cbdd117a319caa3b9e 363 Gene3D G3DSA:3.40.718.10 1 363 8.0E-156 T 14-10-2018 JV59_34815 98755ed7f4d7fc0e3f1d954d3ba29086 287 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 1.4E-68 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JV59_34815 98755ed7f4d7fc0e3f1d954d3ba29086 287 Gene3D G3DSA:3.40.50.10860 8 276 3.9E-107 T 14-10-2018 JV59_34815 98755ed7f4d7fc0e3f1d954d3ba29086 287 SUPERFAMILY SSF53223 1 122 3.07E-39 T 14-10-2018 JV59_34815 98755ed7f4d7fc0e3f1d954d3ba29086 287 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 4.0E-38 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JV59_34815 98755ed7f4d7fc0e3f1d954d3ba29086 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 3.5E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JV59_34815 98755ed7f4d7fc0e3f1d954d3ba29086 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 3.5E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JV59_34815 98755ed7f4d7fc0e3f1d954d3ba29086 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 3.5E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JV59_34815 98755ed7f4d7fc0e3f1d954d3ba29086 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 3.5E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JV59_34815 98755ed7f4d7fc0e3f1d954d3ba29086 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 3.5E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JV59_34815 98755ed7f4d7fc0e3f1d954d3ba29086 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 3.5E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JV59_34815 98755ed7f4d7fc0e3f1d954d3ba29086 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 3.5E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JV59_34815 98755ed7f4d7fc0e3f1d954d3ba29086 287 Gene3D G3DSA:3.40.50.720 6 259 3.9E-107 T 14-10-2018 JV59_34815 98755ed7f4d7fc0e3f1d954d3ba29086 287 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JV59_34815 98755ed7f4d7fc0e3f1d954d3ba29086 287 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.74 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JV59_34815 98755ed7f4d7fc0e3f1d954d3ba29086 287 SUPERFAMILY SSF51735 123 280 2.01E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_34815 98755ed7f4d7fc0e3f1d954d3ba29086 287 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JV59_36955 99c0faf0763b254cdce71608e3413c8f 597 Gene3D G3DSA:3.40.50.300 1 185 2.1E-71 T 14-10-2018 JV59_36955 99c0faf0763b254cdce71608e3413c8f 597 Gene3D G3DSA:3.30.70.2570 479 553 7.2E-33 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily JV59_36955 99c0faf0763b254cdce71608e3413c8f 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 3.3E-49 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal JV59_36955 99c0faf0763b254cdce71608e3413c8f 597 SUPERFAMILY SSF54980 399 493 1.49E-24 T 14-10-2018 IPR035647 EF-G domain III/V-like JV59_36955 99c0faf0763b254cdce71608e3413c8f 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 8.7E-11 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 JV59_36955 99c0faf0763b254cdce71608e3413c8f 597 Gene3D G3DSA:2.40.30.10 186 285 5.7E-34 T 14-10-2018 JV59_36955 99c0faf0763b254cdce71608e3413c8f 597 SUPERFAMILY SSF52540 2 233 1.41E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_36955 99c0faf0763b254cdce71608e3413c8f 597 Gene3D G3DSA:3.30.70.870 286 367 1.3E-35 T 14-10-2018 JV59_36955 99c0faf0763b254cdce71608e3413c8f 597 Gene3D G3DSA:3.30.70.3380 368 478 3.5E-40 T 14-10-2018 JV59_36955 99c0faf0763b254cdce71608e3413c8f 597 Pfam PF00679 Elongation factor G C-terminus 399 482 9.1E-20 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like JV59_36955 99c0faf0763b254cdce71608e3413c8f 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 6.0E-17 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JV59_36955 99c0faf0763b254cdce71608e3413c8f 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.699 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 JV59_36955 99c0faf0763b254cdce71608e3413c8f 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site JV59_36955 99c0faf0763b254cdce71608e3413c8f 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 7.0E-53 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_36955 99c0faf0763b254cdce71608e3413c8f 597 SUPERFAMILY SSF54980 292 370 1.8E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like JV59_36955 99c0faf0763b254cdce71608e3413c8f 597 SMART SM00838 398 486 0.0038 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like JV59_36955 99c0faf0763b254cdce71608e3413c8f 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_36955 99c0faf0763b254cdce71608e3413c8f 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_36955 99c0faf0763b254cdce71608e3413c8f 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_36955 99c0faf0763b254cdce71608e3413c8f 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_36955 99c0faf0763b254cdce71608e3413c8f 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_36955 99c0faf0763b254cdce71608e3413c8f 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 4.7E-301 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 JV59_21570 2c9565948f6cd1b23211bbbdd295d23c 142 Pfam PF01047 MarR family 35 92 2.5E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_21570 2c9565948f6cd1b23211bbbdd295d23c 142 SMART SM00347 28 128 2.5E-30 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_21570 2c9565948f6cd1b23211bbbdd295d23c 142 Gene3D G3DSA:1.10.10.10 1 142 9.9E-40 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_21570 2c9565948f6cd1b23211bbbdd295d23c 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 5.9E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_21570 2c9565948f6cd1b23211bbbdd295d23c 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 5.9E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_21570 2c9565948f6cd1b23211bbbdd295d23c 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 5.9E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_21570 2c9565948f6cd1b23211bbbdd295d23c 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 5.9E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_21570 2c9565948f6cd1b23211bbbdd295d23c 142 SUPERFAMILY SSF46785 3 141 1.65E-37 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_24440 8a19c4c591adc05082a21c9270212219 312 Pfam PF03466 LysR substrate binding domain 89 293 1.4E-40 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_24440 8a19c4c591adc05082a21c9270212219 312 Gene3D G3DSA:3.40.190.290 91 294 9.9E-60 T 14-10-2018 JV59_24440 8a19c4c591adc05082a21c9270212219 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.8E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_24440 8a19c4c591adc05082a21c9270212219 312 Gene3D G3DSA:1.10.10.10 3 89 6.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_24440 8a19c4c591adc05082a21c9270212219 312 SUPERFAMILY SSF53850 90 296 1.52E-41 T 14-10-2018 JV59_24440 8a19c4c591adc05082a21c9270212219 312 SUPERFAMILY SSF46785 4 86 1.32E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_25740 c6aa880e0ad75f85b37d6f792d65e682 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 2.5E-22 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_25740 c6aa880e0ad75f85b37d6f792d65e682 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 2.5E-22 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_25740 c6aa880e0ad75f85b37d6f792d65e682 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 2.5E-22 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_25740 c6aa880e0ad75f85b37d6f792d65e682 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 2.5E-22 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_25740 c6aa880e0ad75f85b37d6f792d65e682 435 SMART SM00388 173 275 6.9E-4 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_25740 c6aa880e0ad75f85b37d6f792d65e682 435 SUPERFAMILY SSF47384 168 208 1.45E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_25740 c6aa880e0ad75f85b37d6f792d65e682 435 Gene3D G3DSA:1.10.287.130 134 270 1.0E-24 T 14-10-2018 JV59_25740 c6aa880e0ad75f85b37d6f792d65e682 435 SMART SM00387 316 425 6.7E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_25740 c6aa880e0ad75f85b37d6f792d65e682 435 Gene3D G3DSA:3.30.565.10 279 432 5.8E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_25740 c6aa880e0ad75f85b37d6f792d65e682 435 Pfam PF00512 His Kinase A (phospho-acceptor) domain 174 273 7.7E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_25740 c6aa880e0ad75f85b37d6f792d65e682 435 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 423 1.6E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_25740 c6aa880e0ad75f85b37d6f792d65e682 435 SUPERFAMILY SSF55785 7 62 1.29E-5 T 14-10-2018 IPR035965 PAS domain superfamily JV59_25740 c6aa880e0ad75f85b37d6f792d65e682 435 Gene3D G3DSA:3.30.450.20 2 133 1.2E-30 T 14-10-2018 JV59_25740 c6aa880e0ad75f85b37d6f792d65e682 435 SUPERFAMILY SSF55874 270 425 4.45E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_31005 c9424a369647d845735a9261a342460e 212 Pfam PF02613 Nitrate reductase delta subunit 41 156 8.3E-30 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone JV59_31005 c9424a369647d845735a9261a342460e 212 SUPERFAMILY SSF89155 3 188 1.03E-48 T 14-10-2018 IPR036411 TorD-like superfamily JV59_31005 c9424a369647d845735a9261a342460e 212 Gene3D G3DSA:1.10.3480.10 2 191 3.2E-38 T 14-10-2018 JV59_29765 a491077aebd54a12cf9bbca054611645 331 Gene3D G3DSA:2.60.120.10 47 144 7.7E-11 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_29765 a491077aebd54a12cf9bbca054611645 331 Gene3D G3DSA:2.60.120.10 231 323 2.6E-7 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_29765 a491077aebd54a12cf9bbca054611645 331 SUPERFAMILY SSF51182 34 323 2.48E-24 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JV59_26905 454005c8e3e8e9acc5271019d352ce70 150 Pfam PF07977 FabA-like domain 17 141 1.6E-40 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JV59_26905 454005c8e3e8e9acc5271019d352ce70 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 36.67 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JV59_26905 454005c8e3e8e9acc5271019d352ce70 150 Gene3D G3DSA:3.10.129.10 2 150 2.0E-61 T 14-10-2018 JV59_26905 454005c8e3e8e9acc5271019d352ce70 150 SUPERFAMILY SSF54637 7 146 2.09E-49 T 14-10-2018 IPR029069 HotDog domain superfamily JV59_26905 454005c8e3e8e9acc5271019d352ce70 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 6.4E-60 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JV59_36070 10761c2b1d40d66fb27b813a7d25046b 729 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 447 723 7.5E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_36070 10761c2b1d40d66fb27b813a7d25046b 729 Gene3D G3DSA:1.10.3720.10 491 726 8.2E-22 T 14-10-2018 IPR035906 MetI-like superfamily JV59_36070 10761c2b1d40d66fb27b813a7d25046b 729 SUPERFAMILY SSF161098 488 715 5.1E-20 T 14-10-2018 IPR035906 MetI-like superfamily JV59_36070 10761c2b1d40d66fb27b813a7d25046b 729 SUPERFAMILY SSF50998 68 374 7.85E-8 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily JV59_36070 10761c2b1d40d66fb27b813a7d25046b 729 SUPERFAMILY SSF161098 406 522 2.62E-7 T 14-10-2018 IPR035906 MetI-like superfamily JV59_22635 de55af50bcc378c8bf8ef404c6e7179f 117 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 14-10-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 JV59_22635 de55af50bcc378c8bf8ef404c6e7179f 117 Pfam PF00576 HIUase/Transthyretin family 4 116 1.6E-33 T 14-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 JV59_22635 de55af50bcc378c8bf8ef404c6e7179f 117 PRINTS PR00189 Transthyretin signature 3 23 5.3E-8 T 14-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 JV59_22635 de55af50bcc378c8bf8ef404c6e7179f 117 PRINTS PR00189 Transthyretin signature 95 117 5.3E-8 T 14-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 JV59_22635 de55af50bcc378c8bf8ef404c6e7179f 117 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 117 2.3E-38 T 14-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 JV59_22635 de55af50bcc378c8bf8ef404c6e7179f 117 ProSitePatterns PS00769 Transthyretin signature 2. 100 112 - T 14-10-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 JV59_22635 de55af50bcc378c8bf8ef404c6e7179f 117 Gene3D G3DSA:2.60.40.180 1 117 5.8E-38 T 14-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 JV59_22635 de55af50bcc378c8bf8ef404c6e7179f 117 SUPERFAMILY SSF49472 1 117 2.09E-39 T 14-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 JV59_24315 37b3edd95c71db93f4fc0fce74820112 299 SUPERFAMILY SSF46785 7 118 1.52E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_24315 37b3edd95c71db93f4fc0fce74820112 299 SUPERFAMILY SSF53850 95 294 2.17E-26 T 14-10-2018 JV59_24315 37b3edd95c71db93f4fc0fce74820112 299 Gene3D G3DSA:1.10.10.10 9 91 1.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_24315 37b3edd95c71db93f4fc0fce74820112 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.1E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_24315 37b3edd95c71db93f4fc0fce74820112 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.1E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_24315 37b3edd95c71db93f4fc0fce74820112 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.1E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_24315 37b3edd95c71db93f4fc0fce74820112 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 3.8E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_24315 37b3edd95c71db93f4fc0fce74820112 299 Pfam PF03466 LysR substrate binding domain 95 294 1.3E-22 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_24315 37b3edd95c71db93f4fc0fce74820112 299 Gene3D G3DSA:3.40.190.290 98 293 8.5E-25 T 14-10-2018 JV59_39875 4cb7d771463b6e5b214c5a0fc0fb4c23 611 SUPERFAMILY SSF52540 10 203 9.16E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_39875 4cb7d771463b6e5b214c5a0fc0fb4c23 611 Gene3D G3DSA:1.10.10.10 409 521 3.3E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_39875 4cb7d771463b6e5b214c5a0fc0fb4c23 611 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 466 9.6E-191 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 JV59_39875 4cb7d771463b6e5b214c5a0fc0fb4c23 611 SMART SM00487 25 221 1.9E-28 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JV59_39875 4cb7d771463b6e5b214c5a0fc0fb4c23 611 SMART SM00490 253 334 4.0E-29 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_39875 4cb7d771463b6e5b214c5a0fc0fb4c23 611 Pfam PF00270 DEAD/DEAH box helicase 31 189 5.3E-19 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JV59_39875 4cb7d771463b6e5b214c5a0fc0fb4c23 611 Pfam PF09382 RQC domain 409 517 1.2E-35 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 JV59_39875 4cb7d771463b6e5b214c5a0fc0fb4c23 611 Pfam PF00570 HRDC domain 537 603 2.8E-22 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 JV59_39875 4cb7d771463b6e5b214c5a0fc0fb4c23 611 Gene3D G3DSA:3.40.50.300 213 408 8.7E-60 T 14-10-2018 JV59_39875 4cb7d771463b6e5b214c5a0fc0fb4c23 611 Gene3D G3DSA:1.10.150.80 526 610 2.8E-28 T 14-10-2018 JV59_39875 4cb7d771463b6e5b214c5a0fc0fb4c23 611 SMART SM00956 414 517 9.2E-48 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 JV59_39875 4cb7d771463b6e5b214c5a0fc0fb4c23 611 Pfam PF16124 RecQ zinc-binding 346 407 4.4E-18 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain JV59_39875 4cb7d771463b6e5b214c5a0fc0fb4c23 611 SMART SM00341 533 611 2.1E-22 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 JV59_39875 4cb7d771463b6e5b214c5a0fc0fb4c23 611 Pfam PF00271 Helicase conserved C-terminal domain 228 333 2.8E-20 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_39875 4cb7d771463b6e5b214c5a0fc0fb4c23 611 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 17 606 4.5E-253 T 14-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 JV59_39875 4cb7d771463b6e5b214c5a0fc0fb4c23 611 SUPERFAMILY SSF52540 211 459 8.85E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_39875 4cb7d771463b6e5b214c5a0fc0fb4c23 611 SUPERFAMILY SSF47819 534 609 1.2E-25 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 JV59_39875 4cb7d771463b6e5b214c5a0fc0fb4c23 611 Gene3D G3DSA:3.40.50.300 7 211 9.4E-83 T 14-10-2018 JV59_35545 268d4bb2c5aac6ddf4856a6ae86570dc 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 5.5E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_35545 268d4bb2c5aac6ddf4856a6ae86570dc 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 199 213 5.5E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_35545 268d4bb2c5aac6ddf4856a6ae86570dc 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 5.5E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_35545 268d4bb2c5aac6ddf4856a6ae86570dc 254 SUPERFAMILY SSF53474 5 253 1.47E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_35545 268d4bb2c5aac6ddf4856a6ae86570dc 254 Gene3D G3DSA:3.40.50.1820 4 254 3.3E-68 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_35545 268d4bb2c5aac6ddf4856a6ae86570dc 254 Pfam PF12697 Alpha/beta hydrolase family 16 247 2.7E-25 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_35545 268d4bb2c5aac6ddf4856a6ae86570dc 254 PRINTS PR00412 Epoxide hydrolase signature 230 252 2.9E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JV59_35545 268d4bb2c5aac6ddf4856a6ae86570dc 254 PRINTS PR00412 Epoxide hydrolase signature 39 54 2.9E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JV59_35545 268d4bb2c5aac6ddf4856a6ae86570dc 254 PRINTS PR00412 Epoxide hydrolase signature 82 95 2.9E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JV59_37375 1f77813aadeeabb87f2d9b9393f2b195 310 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 310 57.477 T 14-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 JV59_37375 1f77813aadeeabb87f2d9b9393f2b195 310 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 8.2E-48 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 JV59_37375 1f77813aadeeabb87f2d9b9393f2b195 310 SUPERFAMILY SSF56327 146 309 1.7E-40 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 JV59_37375 1f77813aadeeabb87f2d9b9393f2b195 310 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 310 2.9E-130 T 14-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 JV59_37375 1f77813aadeeabb87f2d9b9393f2b195 310 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 1.0E-47 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 JV59_37375 1f77813aadeeabb87f2d9b9393f2b195 310 Gene3D G3DSA:3.40.50.720 1 146 1.4E-66 T 14-10-2018 JV59_37375 1f77813aadeeabb87f2d9b9393f2b195 310 Gene3D G3DSA:3.90.110.10 147 310 1.8E-52 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 JV59_37375 1f77813aadeeabb87f2d9b9393f2b195 310 SUPERFAMILY SSF51735 1 145 1.23E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_37375 1f77813aadeeabb87f2d9b9393f2b195 310 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 14-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 JV59_37375 1f77813aadeeabb87f2d9b9393f2b195 310 PIRSF PIRSF000102 1 308 1.2E-62 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 JV59_22930 e17d52f649f24cec197b2133b14ff603 136 Gene3D G3DSA:3.40.1490.10 2 136 1.8E-45 T 14-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 JV59_22930 e17d52f649f24cec197b2133b14ff603 136 Pfam PF09391 Protein of unknown function (DUF2000) 6 135 8.1E-34 T 14-10-2018 IPR018988 Protein of unknown function DUF2000 JV59_22930 e17d52f649f24cec197b2133b14ff603 136 SUPERFAMILY SSF102462 3 135 1.99E-34 T 14-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 JV59_19180 d7e37639782dd48e93c5139c10d18c6b 631 SUPERFAMILY SSF55874 322 487 4.32E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_19180 d7e37639782dd48e93c5139c10d18c6b 631 Gene3D G3DSA:3.30.565.10 340 493 2.1E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_19180 d7e37639782dd48e93c5139c10d18c6b 631 Pfam PF00072 Response regulator receiver domain 512 622 3.8E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_19180 d7e37639782dd48e93c5139c10d18c6b 631 SMART SM00387 380 487 1.9E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_19180 d7e37639782dd48e93c5139c10d18c6b 631 SUPERFAMILY SSF47384 259 332 1.2E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_19180 d7e37639782dd48e93c5139c10d18c6b 631 SMART SM00388 270 333 7.2E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_19180 d7e37639782dd48e93c5139c10d18c6b 631 SMART SM00448 510 623 2.1E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_19180 d7e37639782dd48e93c5139c10d18c6b 631 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 465 6.7E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_19180 d7e37639782dd48e93c5139c10d18c6b 631 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 444 6.7E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_19180 d7e37639782dd48e93c5139c10d18c6b 631 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 430 6.7E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_19180 d7e37639782dd48e93c5139c10d18c6b 631 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 484 6.7E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_19180 d7e37639782dd48e93c5139c10d18c6b 631 Pfam PF00512 His Kinase A (phospho-acceptor) domain 271 331 1.4E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_19180 d7e37639782dd48e93c5139c10d18c6b 631 Gene3D G3DSA:3.40.50.12740 509 631 1.8E-36 T 14-10-2018 JV59_19180 d7e37639782dd48e93c5139c10d18c6b 631 SUPERFAMILY SSF52172 508 626 5.83E-33 T 14-10-2018 IPR011006 CheY-like superfamily JV59_19180 d7e37639782dd48e93c5139c10d18c6b 631 Gene3D G3DSA:1.10.287.130 244 331 5.6E-15 T 14-10-2018 JV59_19180 d7e37639782dd48e93c5139c10d18c6b 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 385 485 9.4E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_26210 146ffd3d6ae3e269bf8a43f77829cf3f 209 SUPERFAMILY SSF55068 3 206 1.09E-81 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JV59_26210 146ffd3d6ae3e269bf8a43f77829cf3f 209 Pfam PF01625 Peptide methionine sulfoxide reductase 44 196 4.6E-68 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JV59_26210 146ffd3d6ae3e269bf8a43f77829cf3f 209 Gene3D G3DSA:3.30.1060.10 3 208 2.0E-92 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JV59_26210 146ffd3d6ae3e269bf8a43f77829cf3f 209 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 202 38.242 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JV59_26210 146ffd3d6ae3e269bf8a43f77829cf3f 209 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 43 196 2.0E-68 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JV59_34415 4bc7aabd30f8e344946feee2977b02ea 315 Gene3D G3DSA:2.40.50.180 39 158 2.0E-29 T 14-10-2018 JV59_34415 4bc7aabd30f8e344946feee2977b02ea 315 Pfam PF01584 CheW-like domain 21 160 1.4E-36 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JV59_34415 4bc7aabd30f8e344946feee2977b02ea 315 Gene3D G3DSA:3.40.50.2300 183 310 4.2E-22 T 14-10-2018 JV59_34415 4bc7aabd30f8e344946feee2977b02ea 315 SUPERFAMILY SSF52172 183 310 3.27E-21 T 14-10-2018 IPR011006 CheY-like superfamily JV59_34415 4bc7aabd30f8e344946feee2977b02ea 315 PIRSF PIRSF002867 1 312 3.2E-105 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV JV59_34415 4bc7aabd30f8e344946feee2977b02ea 315 Pfam PF00072 Response regulator receiver domain 186 303 1.8E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_34415 4bc7aabd30f8e344946feee2977b02ea 315 SUPERFAMILY SSF50341 16 161 1.19E-34 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 JV59_34415 4bc7aabd30f8e344946feee2977b02ea 315 SMART SM00260 17 158 3.8E-31 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JV59_34415 4bc7aabd30f8e344946feee2977b02ea 315 Gene3D G3DSA:2.30.30.40 24 152 2.0E-29 T 14-10-2018 JV59_34415 4bc7aabd30f8e344946feee2977b02ea 315 SMART SM00448 184 305 3.0E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_00025 ba330fe343e3320e49fe2267a2584535 624 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.0E-67 T 14-10-2018 JV59_00025 ba330fe343e3320e49fe2267a2584535 624 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.0E-67 T 14-10-2018 JV59_00025 ba330fe343e3320e49fe2267a2584535 624 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.0E-67 T 14-10-2018 JV59_00025 ba330fe343e3320e49fe2267a2584535 624 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.0E-67 T 14-10-2018 JV59_00025 ba330fe343e3320e49fe2267a2584535 624 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.0E-67 T 14-10-2018 JV59_00025 ba330fe343e3320e49fe2267a2584535 624 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.0E-67 T 14-10-2018 JV59_00025 ba330fe343e3320e49fe2267a2584535 624 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 455 1.0E-202 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 JV59_00025 ba330fe343e3320e49fe2267a2584535 624 SUPERFAMILY SSF55729 466 584 1.69E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_00025 ba330fe343e3320e49fe2267a2584535 624 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 JV59_00025 ba330fe343e3320e49fe2267a2584535 624 Gene3D G3DSA:1.10.275.10 1 107 2.0E-35 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal JV59_00025 ba330fe343e3320e49fe2267a2584535 624 Gene3D G3DSA:1.10.40.30 363 433 2.2E-148 T 14-10-2018 JV59_00025 ba330fe343e3320e49fe2267a2584535 624 PIRSF PIRSF036456 1 624 0.0 T 14-10-2018 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase GO:0004056|GO:0005737|GO:0006526|GO:0016746 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 JV59_00025 ba330fe343e3320e49fe2267a2584535 624 Gene3D G3DSA:1.20.200.10 108 446 2.2E-148 T 14-10-2018 JV59_00025 ba330fe343e3320e49fe2267a2584535 624 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 6.1E-25 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 JV59_00025 ba330fe343e3320e49fe2267a2584535 624 Pfam PF00206 Lyase 6 301 2.3E-88 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal JV59_00025 ba330fe343e3320e49fe2267a2584535 624 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.561 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 JV59_00025 ba330fe343e3320e49fe2267a2584535 624 Gene3D G3DSA:3.40.630.30 464 609 8.3E-27 T 14-10-2018 JV59_00025 ba330fe343e3320e49fe2267a2584535 624 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 6.5E-28 T 14-10-2018 IPR000362 Fumarate lyase family JV59_00025 ba330fe343e3320e49fe2267a2584535 624 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 6.5E-28 T 14-10-2018 IPR000362 Fumarate lyase family JV59_00025 ba330fe343e3320e49fe2267a2584535 624 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 6.5E-28 T 14-10-2018 IPR000362 Fumarate lyase family JV59_00025 ba330fe343e3320e49fe2267a2584535 624 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 6.5E-28 T 14-10-2018 IPR000362 Fumarate lyase family JV59_00025 ba330fe343e3320e49fe2267a2584535 624 SUPERFAMILY SSF48557 3 455 2.51E-141 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 JV59_00025 ba330fe343e3320e49fe2267a2584535 624 Pfam PF00583 Acetyltransferase (GNAT) family 503 568 2.2E-9 T 14-10-2018 IPR000182 GNAT domain JV59_39965 4d82fe210c5527ac1f1607df223aa7ab 312 Gene3D G3DSA:3.40.190.10 7 211 1.4E-84 T 14-10-2018 JV59_39965 4d82fe210c5527ac1f1607df223aa7ab 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 228 296 4.9E-20 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JV59_39965 4d82fe210c5527ac1f1607df223aa7ab 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JV59_39965 4d82fe210c5527ac1f1607df223aa7ab 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 3.8E-115 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JV59_39965 4d82fe210c5527ac1f1607df223aa7ab 312 SUPERFAMILY SSF53850 6 220 9.23E-86 T 14-10-2018 JV59_39965 4d82fe210c5527ac1f1607df223aa7ab 312 SUPERFAMILY SSF54782 221 310 3.79E-27 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JV59_39965 4d82fe210c5527ac1f1607df223aa7ab 312 Gene3D G3DSA:3.30.160.40 222 307 1.3E-27 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JV59_39965 4d82fe210c5527ac1f1607df223aa7ab 312 Gene3D G3DSA:3.40.190.10 104 203 1.4E-84 T 14-10-2018 JV59_39965 4d82fe210c5527ac1f1607df223aa7ab 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 213 2.2E-79 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JV59_39965 4d82fe210c5527ac1f1607df223aa7ab 312 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 1.8E-47 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JV59_39965 4d82fe210c5527ac1f1607df223aa7ab 312 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 1.8E-47 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JV59_39965 4d82fe210c5527ac1f1607df223aa7ab 312 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 1.8E-47 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JV59_39965 4d82fe210c5527ac1f1607df223aa7ab 312 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 1.8E-47 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JV59_39965 4d82fe210c5527ac1f1607df223aa7ab 312 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 1.8E-47 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JV59_39965 4d82fe210c5527ac1f1607df223aa7ab 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 40.183 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JV59_39965 4d82fe210c5527ac1f1607df223aa7ab 312 PIRSF PIRSF001438 1 312 8.6E-122 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JV59_32595 24f72cf3aa14418b96050244bc431def 152 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 28 61 8.1E-7 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_32595 24f72cf3aa14418b96050244bc431def 152 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 65 74 0.088 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_32595 24f72cf3aa14418b96050244bc431def 152 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 99 132 8.8E-7 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_32595 24f72cf3aa14418b96050244bc431def 152 Gene3D G3DSA:2.160.10.10 4 150 1.7E-35 T 14-10-2018 JV59_32595 24f72cf3aa14418b96050244bc431def 152 SUPERFAMILY SSF51161 26 150 1.44E-33 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JV59_37815 edb8db457214e0cb4ab91d5fdf97787d 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 434 29.251 T 14-10-2018 IPR026593 Protein translocase subunit SecY JV59_37815 edb8db457214e0cb4ab91d5fdf97787d 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JV59_37815 edb8db457214e0cb4ab91d5fdf97787d 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 430 9.7E-135 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JV59_37815 edb8db457214e0cb4ab91d5fdf97787d 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 1.9E-95 T 14-10-2018 JV59_37815 edb8db457214e0cb4ab91d5fdf97787d 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 1.9E-95 T 14-10-2018 JV59_37815 edb8db457214e0cb4ab91d5fdf97787d 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 1.9E-95 T 14-10-2018 JV59_37815 edb8db457214e0cb4ab91d5fdf97787d 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.9E-95 T 14-10-2018 JV59_37815 edb8db457214e0cb4ab91d5fdf97787d 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.9E-95 T 14-10-2018 JV59_37815 edb8db457214e0cb4ab91d5fdf97787d 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 1.9E-95 T 14-10-2018 JV59_37815 edb8db457214e0cb4ab91d5fdf97787d 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.9E-95 T 14-10-2018 JV59_37815 edb8db457214e0cb4ab91d5fdf97787d 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 1.9E-95 T 14-10-2018 JV59_37815 edb8db457214e0cb4ab91d5fdf97787d 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 1.9E-95 T 14-10-2018 JV59_37815 edb8db457214e0cb4ab91d5fdf97787d 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JV59_37815 edb8db457214e0cb4ab91d5fdf97787d 444 Pfam PF00344 SecY translocase 76 418 6.1E-118 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JV59_37815 edb8db457214e0cb4ab91d5fdf97787d 444 SUPERFAMILY SSF103491 15 425 4.71E-131 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JV59_37815 edb8db457214e0cb4ab91d5fdf97787d 444 Gene3D G3DSA:1.10.3370.10 10 430 3.5E-160 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JV59_37815 edb8db457214e0cb4ab91d5fdf97787d 444 PIRSF PIRSF004557 10 442 1.0E-121 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JV59_29705 e5ebfdaadf9e1fadacb2b33905689aaf 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 221 3.0E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_29705 e5ebfdaadf9e1fadacb2b33905689aaf 227 SUPERFAMILY SSF52172 2 126 7.26E-37 T 14-10-2018 IPR011006 CheY-like superfamily JV59_29705 e5ebfdaadf9e1fadacb2b33905689aaf 227 SMART SM00448 4 115 5.7E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_29705 e5ebfdaadf9e1fadacb2b33905689aaf 227 SMART SM00862 147 221 5.6E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_29705 e5ebfdaadf9e1fadacb2b33905689aaf 227 SUPERFAMILY SSF46894 125 221 6.8E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_29705 e5ebfdaadf9e1fadacb2b33905689aaf 227 Pfam PF00072 Response regulator receiver domain 7 114 6.8E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_29705 e5ebfdaadf9e1fadacb2b33905689aaf 227 Gene3D G3DSA:3.40.50.2300 1 125 2.3E-36 T 14-10-2018 JV59_29705 e5ebfdaadf9e1fadacb2b33905689aaf 227 Gene3D G3DSA:1.10.10.10 126 227 2.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_16590 0e7aa639d3b495460e9dc5852c697b52 297 Gene3D G3DSA:3.40.190.10 92 286 2.3E-37 T 14-10-2018 JV59_16590 0e7aa639d3b495460e9dc5852c697b52 297 Pfam PF03466 LysR substrate binding domain 88 289 7.2E-25 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_16590 0e7aa639d3b495460e9dc5852c697b52 297 Gene3D G3DSA:1.10.10.10 3 91 1.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_16590 0e7aa639d3b495460e9dc5852c697b52 297 SUPERFAMILY SSF53850 90 293 2.02E-27 T 14-10-2018 JV59_16590 0e7aa639d3b495460e9dc5852c697b52 297 Gene3D G3DSA:3.40.190.10 164 261 2.3E-37 T 14-10-2018 JV59_16590 0e7aa639d3b495460e9dc5852c697b52 297 SUPERFAMILY SSF46785 7 88 2.29E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_16590 0e7aa639d3b495460e9dc5852c697b52 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 2.0E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_16815 d834fffbb564f8b563c8b17cce5b4a9c 282 Gene3D G3DSA:3.40.50.300 17 281 6.1E-75 T 14-10-2018 JV59_16815 d834fffbb564f8b563c8b17cce5b4a9c 282 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_16815 d834fffbb564f8b563c8b17cce5b4a9c 282 SMART SM00382 49 238 1.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_16815 d834fffbb564f8b563c8b17cce5b4a9c 282 Pfam PF00005 ABC transporter 51 190 8.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_16815 d834fffbb564f8b563c8b17cce5b4a9c 282 SUPERFAMILY SSF52540 35 262 2.97E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_28835 aa85cd63ebe706aead9f324739ea33de 267 SUPERFAMILY SSF53335 19 221 6.54E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_28835 aa85cd63ebe706aead9f324739ea33de 267 Pfam PF08241 Methyltransferase domain 57 150 2.9E-25 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 JV59_28835 aa85cd63ebe706aead9f324739ea33de 267 Gene3D G3DSA:3.40.50.150 18 192 1.2E-37 T 14-10-2018 JV59_28835 aa85cd63ebe706aead9f324739ea33de 267 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 21 265 1.4E-64 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 JV59_28835 aa85cd63ebe706aead9f324739ea33de 267 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 13 267 31.369 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 JV59_39290 4ab90a06e0ae292eee1c1ac878cb38e6 210 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 27.676 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 JV59_39290 4ab90a06e0ae292eee1c1ac878cb38e6 210 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 207 3.7E-58 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 JV59_39290 4ab90a06e0ae292eee1c1ac878cb38e6 210 PIRSF PIRSF003078 1 210 3.5E-58 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 JV59_39290 4ab90a06e0ae292eee1c1ac878cb38e6 210 SUPERFAMILY SSF53335 8 208 5.22E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_39290 4ab90a06e0ae292eee1c1ac878cb38e6 210 Gene3D G3DSA:3.40.50.150 5 209 7.3E-67 T 14-10-2018 JV59_39290 4ab90a06e0ae292eee1c1ac878cb38e6 210 Pfam PF02527 rRNA small subunit methyltransferase G 24 204 7.8E-63 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 JV59_34180 d9af38b033da714451a83eecaecc32b9 483 Pfam PF01266 FAD dependent oxidoreductase 70 430 5.0E-46 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JV59_34180 d9af38b033da714451a83eecaecc32b9 483 Gene3D G3DSA:3.50.50.60 70 431 3.2E-65 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_34180 d9af38b033da714451a83eecaecc32b9 483 Gene3D G3DSA:3.30.9.10 163 390 3.2E-65 T 14-10-2018 JV59_34180 d9af38b033da714451a83eecaecc32b9 483 SUPERFAMILY SSF51905 69 459 1.81E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_26830 3ec0220c13a7cd639b6d0f9a6124ff25 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 2.3E-73 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 JV59_26830 3ec0220c13a7cd639b6d0f9a6124ff25 149 Pfam PF03477 ATP cone domain 50 136 2.2E-16 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 JV59_26830 3ec0220c13a7cd639b6d0f9a6124ff25 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 90.282 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 JV59_36830 16fc688d61c938cee35bd10d062a875a 946 Gene3D G3DSA:3.30.460.10 115 287 2.1E-65 T 14-10-2018 JV59_36830 16fc688d61c938cee35bd10d062a875a 946 SUPERFAMILY SSF81301 527 813 1.64E-87 T 14-10-2018 JV59_36830 16fc688d61c938cee35bd10d062a875a 946 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 30 943 19.267 T 14-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 JV59_36830 16fc688d61c938cee35bd10d062a875a 946 Gene3D G3DSA:1.10.4050.10 2 112 9.9E-12 T 14-10-2018 JV59_36830 16fc688d61c938cee35bd10d062a875a 946 Gene3D G3DSA:1.20.120.330 814 946 2.3E-41 T 14-10-2018 JV59_36830 16fc688d61c938cee35bd10d062a875a 946 SUPERFAMILY SSF81593 290 439 2.51E-43 T 14-10-2018 JV59_36830 16fc688d61c938cee35bd10d062a875a 946 SUPERFAMILY SSF81593 820 945 4.94E-31 T 14-10-2018 JV59_36830 16fc688d61c938cee35bd10d062a875a 946 Gene3D G3DSA:3.30.460.100 564 813 5.6E-92 T 14-10-2018 JV59_36830 16fc688d61c938cee35bd10d062a875a 946 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 555 807 1.2E-97 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 JV59_36830 16fc688d61c938cee35bd10d062a875a 946 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 33 279 1.3E-92 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 JV59_36830 16fc688d61c938cee35bd10d062a875a 946 SUPERFAMILY SSF81301 16 289 2.54E-87 T 14-10-2018 JV59_36830 16fc688d61c938cee35bd10d062a875a 946 Gene3D G3DSA:1.20.120.330 288 443 3.8E-55 T 14-10-2018 JV59_36830 16fc688d61c938cee35bd10d062a875a 946 Pfam PF08335 GlnD PII-uridylyltransferase 828 939 3.3E-8 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 JV59_36830 16fc688d61c938cee35bd10d062a875a 946 Pfam PF08335 GlnD PII-uridylyltransferase 300 439 4.0E-47 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 JV59_36830 16fc688d61c938cee35bd10d062a875a 946 Gene3D G3DSA:1.20.120.1510 450 563 7.2E-34 T 14-10-2018 JV59_26215 190b81affe68061ed492415cbb7b1f4d 115 Gene3D G3DSA:3.10.490.10 4 115 3.6E-37 T 14-10-2018 JV59_26215 190b81affe68061ed492415cbb7b1f4d 115 SUPERFAMILY SSF110857 3 114 1.96E-31 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily JV59_26215 190b81affe68061ed492415cbb7b1f4d 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 112 2.0E-24 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like JV59_38235 226d226ec677664b93eff20292e61e62 306 Gene3D G3DSA:3.40.50.720 90 275 4.7E-95 T 14-10-2018 JV59_38235 226d226ec677664b93eff20292e61e62 306 Gene3D G3DSA:3.40.50.720 31 298 4.7E-95 T 14-10-2018 JV59_38235 226d226ec677664b93eff20292e61e62 306 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 98 271 3.0E-48 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 JV59_38235 226d226ec677664b93eff20292e61e62 306 SUPERFAMILY SSF51735 92 272 3.55E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_38235 226d226ec677664b93eff20292e61e62 306 SUPERFAMILY SSF52283 19 119 1.81E-6 T 14-10-2018 JV59_20760 8c34569a286461ec43fe74f626446b0f 216 SUPERFAMILY SSF46894 118 212 1.08E-28 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_20760 8c34569a286461ec43fe74f626446b0f 216 SUPERFAMILY SSF52172 1 170 2.56E-23 T 14-10-2018 IPR011006 CheY-like superfamily JV59_20760 8c34569a286461ec43fe74f626446b0f 216 Pfam PF00072 Response regulator receiver domain 5 110 1.9E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_20760 8c34569a286461ec43fe74f626446b0f 216 SMART SM00862 140 211 5.8E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_20760 8c34569a286461ec43fe74f626446b0f 216 Pfam PF00486 Transcriptional regulatory protein, C terminal 141 211 3.6E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_20760 8c34569a286461ec43fe74f626446b0f 216 Gene3D G3DSA:3.40.50.2300 1 119 8.4E-24 T 14-10-2018 JV59_20760 8c34569a286461ec43fe74f626446b0f 216 SMART SM00448 2 110 5.5E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_20760 8c34569a286461ec43fe74f626446b0f 216 Gene3D G3DSA:1.10.10.10 120 215 4.8E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_25295 26b05d166dc8f0820fcf8543a4539f7c 278 SUPERFAMILY SSF52058 37 265 7.82E-26 T 14-10-2018 JV59_25295 26b05d166dc8f0820fcf8543a4539f7c 278 Pfam PF13516 Leucine Rich repeat 115 131 0.0035 T 14-10-2018 IPR001611 Leucine-rich repeat GO:0005515 JV59_25295 26b05d166dc8f0820fcf8543a4539f7c 278 Gene3D G3DSA:3.80.10.10 26 276 5.9E-53 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JV59_22525 2466dd84ffc660ef08612f866b51c090 409 Gene3D G3DSA:1.10.1740.10 10 88 2.5E-7 T 14-10-2018 JV59_22525 2466dd84ffc660ef08612f866b51c090 409 Pfam PF04542 Sigma-70 region 2 32 85 5.4E-9 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JV59_22525 2466dd84ffc660ef08612f866b51c090 409 Gene3D G3DSA:1.25.40.10 195 401 2.1E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_22525 2466dd84ffc660ef08612f866b51c090 409 Gene3D G3DSA:1.10.10.10 112 172 2.0E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_22525 2466dd84ffc660ef08612f866b51c090 409 Pfam PF08281 Sigma-70, region 4 117 168 4.2E-8 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JV59_22525 2466dd84ffc660ef08612f866b51c090 409 SUPERFAMILY SSF48452 266 393 9.49E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_22525 2466dd84ffc660ef08612f866b51c090 409 SUPERFAMILY SSF88946 23 95 1.8E-11 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JV59_22525 2466dd84ffc660ef08612f866b51c090 409 SUPERFAMILY SSF88659 109 169 2.62E-10 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JV59_18395 fc7c48acdc968439c9ebc50650f76cfc 313 Pfam PF00892 EamA-like transporter family 164 296 5.0E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_18395 fc7c48acdc968439c9ebc50650f76cfc 313 Pfam PF00892 EamA-like transporter family 12 146 1.8E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_18395 fc7c48acdc968439c9ebc50650f76cfc 313 SUPERFAMILY SSF103481 201 302 1.18E-13 T 14-10-2018 JV59_18395 fc7c48acdc968439c9ebc50650f76cfc 313 SUPERFAMILY SSF103481 48 149 9.55E-8 T 14-10-2018 JV59_32155 355c671a6577c5e48e3829ed1d556616 342 Gene3D G3DSA:3.40.50.10210 51 323 3.8E-121 T 14-10-2018 JV59_32155 355c671a6577c5e48e3829ed1d556616 342 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 342 35.79 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 JV59_32155 355c671a6577c5e48e3829ed1d556616 342 Gene3D G3DSA:1.10.1610.10 13 340 3.8E-121 T 14-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 JV59_32155 355c671a6577c5e48e3829ed1d556616 342 Pfam PF02277 Phosphoribosyltransferase 2 340 4.0E-127 T 14-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 JV59_32155 355c671a6577c5e48e3829ed1d556616 342 SUPERFAMILY SSF52733 2 341 1.57E-112 T 14-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 JV59_32155 355c671a6577c5e48e3829ed1d556616 342 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3 340 5.8E-128 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 JV59_22690 5b71f5cf772862d67c50bc517369a3ed 295 Gene3D G3DSA:1.10.10.10 2 92 2.0E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_22690 5b71f5cf772862d67c50bc517369a3ed 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 60 1.1E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_22690 5b71f5cf772862d67c50bc517369a3ed 295 SUPERFAMILY SSF53850 91 289 1.52E-25 T 14-10-2018 JV59_22690 5b71f5cf772862d67c50bc517369a3ed 295 Pfam PF03466 LysR substrate binding domain 90 289 3.9E-25 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_22690 5b71f5cf772862d67c50bc517369a3ed 295 Gene3D G3DSA:3.40.190.10 94 279 7.7E-28 T 14-10-2018 JV59_22690 5b71f5cf772862d67c50bc517369a3ed 295 SUPERFAMILY SSF46785 1 111 2.42E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_22690 5b71f5cf772862d67c50bc517369a3ed 295 Gene3D G3DSA:3.40.190.10 167 264 7.7E-28 T 14-10-2018 JV59_22690 5b71f5cf772862d67c50bc517369a3ed 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_22690 5b71f5cf772862d67c50bc517369a3ed 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_22690 5b71f5cf772862d67c50bc517369a3ed 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_28310 3e25f9f6ee751100f659a0824e82da44 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.4E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JV59_28310 3e25f9f6ee751100f659a0824e82da44 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.4E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JV59_28310 3e25f9f6ee751100f659a0824e82da44 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.4E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JV59_28310 3e25f9f6ee751100f659a0824e82da44 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.4E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JV59_28310 3e25f9f6ee751100f659a0824e82da44 460 Pfam PF09190 DALR domain 341 402 7.8E-25 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 JV59_28310 3e25f9f6ee751100f659a0824e82da44 460 SMART SM00840 341 402 8.7E-27 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 JV59_28310 3e25f9f6ee751100f659a0824e82da44 460 SUPERFAMILY SSF52374 1 313 3.84E-104 T 14-10-2018 JV59_28310 3e25f9f6ee751100f659a0824e82da44 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 9.5E-143 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 JV59_28310 3e25f9f6ee751100f659a0824e82da44 460 Gene3D G3DSA:1.20.120.640 306 460 2.2E-51 T 14-10-2018 JV59_28310 3e25f9f6ee751100f659a0824e82da44 460 Gene3D G3DSA:3.40.50.620 1 305 9.9E-139 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_28310 3e25f9f6ee751100f659a0824e82da44 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 39.404 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 JV59_28310 3e25f9f6ee751100f659a0824e82da44 460 SUPERFAMILY SSF47323 316 459 4.58E-41 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_28310 3e25f9f6ee751100f659a0824e82da44 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 7.5E-194 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 JV59_33590 cf89dd189071bf428cb3ce11f3ed0107 759 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 24 640 49.007 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 JV59_33590 cf89dd189071bf428cb3ce11f3ed0107 759 Pfam PF08497 Radical SAM N-terminal 24 372 1.9E-141 T 14-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal JV59_33590 cf89dd189071bf428cb3ce11f3ed0107 759 Gene3D G3DSA:3.80.30.20 369 632 7.3E-13 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe JV59_33590 cf89dd189071bf428cb3ce11f3ed0107 759 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 638 9.5E-261 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 JV59_33590 cf89dd189071bf428cb3ce11f3ed0107 759 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 373 393 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 JV59_33590 cf89dd189071bf428cb3ce11f3ed0107 759 Pfam PF11842 Domain of unknown function (DUF3362) 587 735 8.8E-45 T 14-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal JV59_33590 cf89dd189071bf428cb3ce11f3ed0107 759 SUPERFAMILY SSF102114 372 607 8.37E-11 T 14-10-2018 JV59_33590 cf89dd189071bf428cb3ce11f3ed0107 759 SMART SM00729 369 619 1.7E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JV59_33590 cf89dd189071bf428cb3ce11f3ed0107 759 Pfam PF04055 Radical SAM superfamily 373 578 9.6E-20 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JV59_22130 7a984abfc1ee8dbf12be74094bd200c9 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 90 106 6.2E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_22130 7a984abfc1ee8dbf12be74094bd200c9 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 75 90 6.2E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_22130 7a984abfc1ee8dbf12be74094bd200c9 300 SUPERFAMILY SSF46689 7 57 5.38E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_22130 7a984abfc1ee8dbf12be74094bd200c9 300 SUPERFAMILY SSF46689 59 107 7.17E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_22130 7a984abfc1ee8dbf12be74094bd200c9 300 Gene3D G3DSA:1.10.10.60 55 113 1.2E-14 T 14-10-2018 JV59_22130 7a984abfc1ee8dbf12be74094bd200c9 300 SUPERFAMILY SSF55136 153 299 1.02E-31 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily JV59_22130 7a984abfc1ee8dbf12be74094bd200c9 300 SMART SM00342 23 106 2.3E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_22130 7a984abfc1ee8dbf12be74094bd200c9 300 Pfam PF06445 GyrI-like small molecule binding domain 152 286 2.9E-26 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain JV59_22130 7a984abfc1ee8dbf12be74094bd200c9 300 SMART SM00871 150 299 3.3E-23 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding JV59_22130 7a984abfc1ee8dbf12be74094bd200c9 300 Gene3D G3DSA:1.10.10.60 9 54 2.6E-13 T 14-10-2018 JV59_22130 7a984abfc1ee8dbf12be74094bd200c9 300 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 102 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JV59_22130 7a984abfc1ee8dbf12be74094bd200c9 300 Pfam PF12833 Helix-turn-helix domain 31 106 2.3E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_22130 7a984abfc1ee8dbf12be74094bd200c9 300 Gene3D G3DSA:3.20.80.10 151 300 9.5E-38 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily JV59_17020 fcdc3ba0eb6f088cc6f470fc84dd1bd3 734 SUPERFAMILY SSF52540 541 731 2.36E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_17020 fcdc3ba0eb6f088cc6f470fc84dd1bd3 734 Pfam PF13614 AAA domain 552 696 1.7E-13 T 14-10-2018 IPR025669 AAA domain JV59_17020 fcdc3ba0eb6f088cc6f470fc84dd1bd3 734 Pfam PF13807 G-rich domain on putative tyrosine kinase 400 471 1.3E-10 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain JV59_17020 fcdc3ba0eb6f088cc6f470fc84dd1bd3 734 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 522 725 2.3E-46 T 14-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 JV59_17020 fcdc3ba0eb6f088cc6f470fc84dd1bd3 734 Pfam PF02706 Chain length determinant protein 14 104 1.1E-14 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 JV59_17020 fcdc3ba0eb6f088cc6f470fc84dd1bd3 734 Gene3D G3DSA:3.40.50.300 466 733 5.1E-68 T 14-10-2018 JV59_37790 8a508c091d45efaeae99eaad8436429a 330 Gene3D G3DSA:3.30.1360.10 17 229 9.0E-84 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_37790 8a508c091d45efaeae99eaad8436429a 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 8.8E-112 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_37790 8a508c091d45efaeae99eaad8436429a 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 14-10-2018 JV59_37790 8a508c091d45efaeae99eaad8436429a 330 SUPERFAMILY SSF56553 53 179 1.73E-40 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_37790 8a508c091d45efaeae99eaad8436429a 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 1.7E-23 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_37790 8a508c091d45efaeae99eaad8436429a 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 7.1E-24 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_37790 8a508c091d45efaeae99eaad8436429a 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 4.3E-24 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_37790 8a508c091d45efaeae99eaad8436429a 330 Gene3D G3DSA:1.10.150.20 245 330 1.4E-38 T 14-10-2018 JV59_37790 8a508c091d45efaeae99eaad8436429a 330 SUPERFAMILY SSF55257 7 234 3.04E-30 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_37790 8a508c091d45efaeae99eaad8436429a 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_37790 8a508c091d45efaeae99eaad8436429a 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.735 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_37790 8a508c091d45efaeae99eaad8436429a 330 SMART SM00662 23 235 1.3E-104 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_37790 8a508c091d45efaeae99eaad8436429a 330 Gene3D G3DSA:2.170.120.12 53 178 9.0E-84 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_39450 614fa2ad43b5965c495d74fcf8cdd375 460 SUPERFAMILY SSF49503 33 154 4.89E-39 T 14-10-2018 IPR008972 Cupredoxin JV59_39450 614fa2ad43b5965c495d74fcf8cdd375 460 Pfam PF00394 Multicopper oxidase 198 281 2.2E-7 T 14-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 JV59_39450 614fa2ad43b5965c495d74fcf8cdd375 460 ProSitePatterns PS00080 Multicopper oxidases signature 2. 442 453 - T 14-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 JV59_39450 614fa2ad43b5965c495d74fcf8cdd375 460 SUPERFAMILY SSF49503 162 280 1.42E-17 T 14-10-2018 IPR008972 Cupredoxin JV59_39450 614fa2ad43b5965c495d74fcf8cdd375 460 Pfam PF07732 Multicopper oxidase 45 156 2.3E-39 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 JV59_39450 614fa2ad43b5965c495d74fcf8cdd375 460 SUPERFAMILY SSF49503 311 459 1.75E-34 T 14-10-2018 IPR008972 Cupredoxin JV59_39450 614fa2ad43b5965c495d74fcf8cdd375 460 Gene3D G3DSA:2.60.40.420 154 308 5.2E-23 T 14-10-2018 IPR008972 Cupredoxin JV59_39450 614fa2ad43b5965c495d74fcf8cdd375 460 Pfam PF07731 Multicopper oxidase 358 459 7.6E-27 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 JV59_39450 614fa2ad43b5965c495d74fcf8cdd375 460 Gene3D G3DSA:2.60.40.420 10 153 3.3E-45 T 14-10-2018 IPR008972 Cupredoxin JV59_39450 614fa2ad43b5965c495d74fcf8cdd375 460 Gene3D G3DSA:2.60.40.420 309 460 6.6E-39 T 14-10-2018 IPR008972 Cupredoxin JV59_10720 a3e2ce7cbe1b6748c5fe426706fe97c6 222 Pfam PF03379 CcmB protein 5 219 1.5E-91 T 14-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_10720 a3e2ce7cbe1b6748c5fe426706fe97c6 222 PIRSF PIRSF002764 1 222 3.2E-84 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria JV59_10720 a3e2ce7cbe1b6748c5fe426706fe97c6 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 1.1E-70 T 14-10-2018 JV59_10720 a3e2ce7cbe1b6748c5fe426706fe97c6 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 1.1E-70 T 14-10-2018 JV59_10720 a3e2ce7cbe1b6748c5fe426706fe97c6 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 1.1E-70 T 14-10-2018 JV59_10720 a3e2ce7cbe1b6748c5fe426706fe97c6 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 1.1E-70 T 14-10-2018 JV59_10720 a3e2ce7cbe1b6748c5fe426706fe97c6 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 1.1E-70 T 14-10-2018 JV59_10720 a3e2ce7cbe1b6748c5fe426706fe97c6 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 1.1E-70 T 14-10-2018 JV59_10720 a3e2ce7cbe1b6748c5fe426706fe97c6 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 3.0E-93 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria JV59_29015 76274b0fc5961bdaf5c34918e4126bd2 222 Pfam PF04012 PspA/IM30 family 2 217 5.0E-61 T 14-10-2018 IPR007157 PspA/IM30 JV59_29015 76274b0fc5961bdaf5c34918e4126bd2 222 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 1.1E-94 T 14-10-2018 IPR014319 Phage shock protein, PspA JV59_34850 c220a3f6aef0b9ffecf85405e41e242c 366 Gene3D G3DSA:3.40.50.2300 11 148 2.1E-35 T 14-10-2018 JV59_34850 c220a3f6aef0b9ffecf85405e41e242c 366 SUPERFAMILY SSF52172 20 137 4.7E-34 T 14-10-2018 IPR011006 CheY-like superfamily JV59_34850 c220a3f6aef0b9ffecf85405e41e242c 366 SMART SM00448 20 132 1.6E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_34850 c220a3f6aef0b9ffecf85405e41e242c 366 Gene3D G3DSA:3.60.40.10 164 342 4.4E-9 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JV59_34850 c220a3f6aef0b9ffecf85405e41e242c 366 Pfam PF00072 Response regulator receiver domain 22 131 5.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_38945 64718eaf6146b92ec406532b59685714 304 Pfam PF03631 Virulence factor BrkB 24 271 2.2E-57 T 14-10-2018 IPR017039 Virulence factor BrkB JV59_38945 64718eaf6146b92ec406532b59685714 304 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 12 270 1.3E-80 T 14-10-2018 IPR017039 Virulence factor BrkB JV59_38945 64718eaf6146b92ec406532b59685714 304 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 11 290 23.504 T 14-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial JV59_38945 64718eaf6146b92ec406532b59685714 304 PIRSF PIRSF035875 1 292 1.0E-53 T 14-10-2018 IPR017039 Virulence factor BrkB JV59_18025 439909f888fbe451d6cc89f983c7ccf7 119 PIRSF PIRSF028299 1 117 3.4E-19 T 14-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 JV59_18025 439909f888fbe451d6cc89f983c7ccf7 119 Pfam PF11777 Protein of unknown function (DUF3316) 3 110 7.1E-8 T 14-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 JV59_20160 12568fb18ebfa3beba4c621eb2fcaa58 262 Pfam PF12833 Helix-turn-helix domain 182 258 4.6E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_20160 12568fb18ebfa3beba4c621eb2fcaa58 262 Gene3D G3DSA:2.60.120.10 5 93 6.8E-6 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_20160 12568fb18ebfa3beba4c621eb2fcaa58 262 Gene3D G3DSA:1.10.10.60 156 261 4.0E-22 T 14-10-2018 JV59_20160 12568fb18ebfa3beba4c621eb2fcaa58 262 SUPERFAMILY SSF46689 213 260 5.38E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_20160 12568fb18ebfa3beba4c621eb2fcaa58 262 SUPERFAMILY SSF51182 19 185 2.89E-12 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JV59_20160 12568fb18ebfa3beba4c621eb2fcaa58 262 SMART SM00342 176 258 2.5E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_20160 12568fb18ebfa3beba4c621eb2fcaa58 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 258 8.6E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_20160 12568fb18ebfa3beba4c621eb2fcaa58 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 227 242 8.6E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_00500 afd083f23646aef7c9f35eabf0c3ea51 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 1.7E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_00500 afd083f23646aef7c9f35eabf0c3ea51 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 1.7E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_00500 afd083f23646aef7c9f35eabf0c3ea51 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 1.7E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_00500 afd083f23646aef7c9f35eabf0c3ea51 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 1.7E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_00500 afd083f23646aef7c9f35eabf0c3ea51 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 1.7E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_00500 afd083f23646aef7c9f35eabf0c3ea51 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 1.7E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_00500 afd083f23646aef7c9f35eabf0c3ea51 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_00500 afd083f23646aef7c9f35eabf0c3ea51 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 525 42.729 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_00500 afd083f23646aef7c9f35eabf0c3ea51 550 SUPERFAMILY SSF53697 6 548 2.72E-226 T 14-10-2018 JV59_00500 afd083f23646aef7c9f35eabf0c3ea51 550 Pfam PF00342 Phosphoglucose isomerase 53 542 8.6E-255 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_00500 afd083f23646aef7c9f35eabf0c3ea51 550 Gene3D G3DSA:1.10.1390.10 508 550 2.8E-20 T 14-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_00500 afd083f23646aef7c9f35eabf0c3ea51 550 Gene3D G3DSA:3.40.50.10490 99 292 7.3E-241 T 14-10-2018 JV59_00500 afd083f23646aef7c9f35eabf0c3ea51 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_00500 afd083f23646aef7c9f35eabf0c3ea51 550 Gene3D G3DSA:3.40.50.10490 13 507 7.3E-241 T 14-10-2018 JV59_02645 74aff963334117b76b9ca4a7d63452e8 344 SMART SM00930 265 340 1.8E-29 T 14-10-2018 IPR018449 NIL domain JV59_02645 74aff963334117b76b9ca4a7d63452e8 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 7.7E-198 T 14-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 JV59_02645 74aff963334117b76b9ca4a7d63452e8 344 Pfam PF09383 NIL domain 268 339 4.6E-22 T 14-10-2018 IPR018449 NIL domain JV59_02645 74aff963334117b76b9ca4a7d63452e8 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_02645 74aff963334117b76b9ca4a7d63452e8 344 Gene3D G3DSA:3.40.50.300 1 244 7.1E-75 T 14-10-2018 JV59_02645 74aff963334117b76b9ca4a7d63452e8 344 Gene3D G3DSA:3.30.70.260 245 344 9.9E-41 T 14-10-2018 JV59_02645 74aff963334117b76b9ca4a7d63452e8 344 SMART SM00382 30 235 2.9E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_02645 74aff963334117b76b9ca4a7d63452e8 344 SUPERFAMILY SSF52540 1 239 1.65E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_02645 74aff963334117b76b9ca4a7d63452e8 344 Pfam PF00005 ABC transporter 21 169 6.2E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_02645 74aff963334117b76b9ca4a7d63452e8 344 SUPERFAMILY SSF55021 248 343 3.2E-26 T 14-10-2018 JV59_18425 cd8b02f4fa597029c9b871eb38a96e7e 403 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 JV59_18425 cd8b02f4fa597029c9b871eb38a96e7e 403 Pfam PF02803 Thiolase, C-terminal domain 268 400 7.9E-36 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 JV59_18425 cd8b02f4fa597029c9b871eb38a96e7e 403 SUPERFAMILY SSF53901 5 267 1.33E-74 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_18425 cd8b02f4fa597029c9b871eb38a96e7e 403 SUPERFAMILY SSF53901 268 400 2.22E-33 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_18425 cd8b02f4fa597029c9b871eb38a96e7e 403 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 400 7.3E-123 T 14-10-2018 IPR002155 Thiolase GO:0016747 JV59_18425 cd8b02f4fa597029c9b871eb38a96e7e 403 ProSitePatterns PS00099 Thiolases active site. 383 396 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 JV59_18425 cd8b02f4fa597029c9b871eb38a96e7e 403 Pfam PF00108 Thiolase, N-terminal domain 7 259 7.4E-83 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 JV59_18425 cd8b02f4fa597029c9b871eb38a96e7e 403 Gene3D G3DSA:3.40.47.10 8 273 1.6E-134 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_18425 cd8b02f4fa597029c9b871eb38a96e7e 403 Gene3D G3DSA:3.40.47.10 128 397 1.6E-134 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_18425 cd8b02f4fa597029c9b871eb38a96e7e 403 PIRSF PIRSF000429 1 402 2.6E-106 T 14-10-2018 IPR002155 Thiolase GO:0016747 JV59_28025 8e315cc7c573bf0255fe0eb47ebedd4b 194 Gene3D G3DSA:2.40.500.20 83 194 4.8E-42 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_28025 8e315cc7c573bf0255fe0eb47ebedd4b 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 3.5E-38 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_28025 8e315cc7c573bf0255fe0eb47ebedd4b 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_28025 8e315cc7c573bf0255fe0eb47ebedd4b 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 3.4E-34 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_28025 8e315cc7c573bf0255fe0eb47ebedd4b 194 SUPERFAMILY SSF46609 1 84 4.71E-35 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_28025 8e315cc7c573bf0255fe0eb47ebedd4b 194 Gene3D G3DSA:1.10.287.990 20 82 7.3E-25 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_28025 8e315cc7c573bf0255fe0eb47ebedd4b 194 SUPERFAMILY SSF54719 84 193 4.98E-43 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_28025 8e315cc7c573bf0255fe0eb47ebedd4b 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.5E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_28025 8e315cc7c573bf0255fe0eb47ebedd4b 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.5E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_28025 8e315cc7c573bf0255fe0eb47ebedd4b 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.5E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_28025 8e315cc7c573bf0255fe0eb47ebedd4b 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.5E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_28025 8e315cc7c573bf0255fe0eb47ebedd4b 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.5E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_28025 8e315cc7c573bf0255fe0eb47ebedd4b 194 PIRSF PIRSF000349 1 194 8.2E-85 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JV59_28820 90d579f91d6f865ec3d3766b77280050 427 Pfam PF00202 Aminotransferase class-III 24 418 3.4E-132 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JV59_28820 90d579f91d6f865ec3d3766b77280050 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JV59_28820 90d579f91d6f865ec3d3766b77280050 427 Gene3D G3DSA:3.90.1150.10 7 411 2.5E-172 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_28820 90d579f91d6f865ec3d3766b77280050 427 SUPERFAMILY SSF53383 4 419 9.21E-138 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_28820 90d579f91d6f865ec3d3766b77280050 427 Gene3D G3DSA:3.40.640.10 58 327 2.5E-172 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_28820 90d579f91d6f865ec3d3766b77280050 427 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 418 2.3E-180 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 JV59_28820 90d579f91d6f865ec3d3766b77280050 427 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 421 49.569 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 JV59_28820 90d579f91d6f865ec3d3766b77280050 427 PIRSF PIRSF000521 21 421 1.4E-36 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JV59_39555 53b0370ebcb994911df351ecbf4c86dc 493 Pfam PF03440 Aerolysin/Pertussis toxin (APT) domain 25 101 6.3E-19 T 14-10-2018 IPR005138 Aerolysin/Pertussis toxin domain JV59_39555 53b0370ebcb994911df351ecbf4c86dc 493 SUPERFAMILY SSF56436 24 104 1.98E-33 T 14-10-2018 IPR016187 C-type lectin fold JV59_39555 53b0370ebcb994911df351ecbf4c86dc 493 SMART SM00999 117 479 1.5E-245 T 14-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 JV59_39555 53b0370ebcb994911df351ecbf4c86dc 493 Gene3D G3DSA:3.10.40.10 22 111 2.3E-35 T 14-10-2018 IPR037015 Aerolysin/Pertussis toxin (APT), N-terminal domain superfamily JV59_39555 53b0370ebcb994911df351ecbf4c86dc 493 PRINTS PR00754 Aerolysin signature 420 439 3.6E-75 T 14-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 JV59_39555 53b0370ebcb994911df351ecbf4c86dc 493 PRINTS PR00754 Aerolysin signature 63 82 3.6E-75 T 14-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 JV59_39555 53b0370ebcb994911df351ecbf4c86dc 493 PRINTS PR00754 Aerolysin signature 138 160 3.6E-75 T 14-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 JV59_39555 53b0370ebcb994911df351ecbf4c86dc 493 PRINTS PR00754 Aerolysin signature 334 357 3.6E-75 T 14-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 JV59_39555 53b0370ebcb994911df351ecbf4c86dc 493 PRINTS PR00754 Aerolysin signature 401 419 3.6E-75 T 14-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 JV59_39555 53b0370ebcb994911df351ecbf4c86dc 493 PRINTS PR00754 Aerolysin signature 44 62 3.6E-75 T 14-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 JV59_39555 53b0370ebcb994911df351ecbf4c86dc 493 PRINTS PR00754 Aerolysin signature 262 286 3.6E-75 T 14-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 JV59_39555 53b0370ebcb994911df351ecbf4c86dc 493 PRINTS PR00754 Aerolysin signature 379 398 3.6E-75 T 14-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 JV59_39555 53b0370ebcb994911df351ecbf4c86dc 493 Gene3D G3DSA:2.170.15.10 198 441 3.7E-147 T 14-10-2018 JV59_39555 53b0370ebcb994911df351ecbf4c86dc 493 Gene3D G3DSA:3.30.412.10 119 417 3.7E-147 T 14-10-2018 JV59_39555 53b0370ebcb994911df351ecbf4c86dc 493 Pfam PF01117 Aerolysin toxin 118 478 2.2E-129 T 14-10-2018 IPR005830 Aerolysin GO:0005576|GO:0009405 JV59_39555 53b0370ebcb994911df351ecbf4c86dc 493 SUPERFAMILY SSF56973 109 492 1.24E-103 T 14-10-2018 JV59_16635 9592c56dd4afb9f5e7850940476df545 210 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 172 2.8E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_16635 9592c56dd4afb9f5e7850940476df545 210 Gene3D G3DSA:1.10.260.80 24 75 7.7E-52 T 14-10-2018 JV59_16635 9592c56dd4afb9f5e7850940476df545 210 SUPERFAMILY SSF56784 9 198 1.27E-34 T 14-10-2018 IPR036412 HAD-like superfamily JV59_16635 9592c56dd4afb9f5e7850940476df545 210 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 83 165 3.5E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_16635 9592c56dd4afb9f5e7850940476df545 210 Pfam PF13419 Haloacid dehalogenase-like hydrolase 33 171 1.1E-16 T 14-10-2018 JV59_16635 9592c56dd4afb9f5e7850940476df545 210 Gene3D G3DSA:3.40.50.1000 12 188 7.7E-52 T 14-10-2018 IPR023214 HAD superfamily JV59_34140 7fe0e1e0e6ff899501a4ecca65ede117 364 Gene3D G3DSA:3.40.50.2000 192 343 4.6E-116 T 14-10-2018 JV59_34140 7fe0e1e0e6ff899501a4ecca65ede117 364 Gene3D G3DSA:3.40.50.2000 11 348 4.6E-116 T 14-10-2018 JV59_34140 7fe0e1e0e6ff899501a4ecca65ede117 364 SUPERFAMILY SSF53756 9 357 5.23E-94 T 14-10-2018 JV59_34140 7fe0e1e0e6ff899501a4ecca65ede117 364 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 9 357 7.9E-107 T 14-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 JV59_34140 7fe0e1e0e6ff899501a4ecca65ede117 364 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 33 356 1.2E-95 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 JV59_19100 8026bda837d92248a1c6c33a16879d9d 318 Gene3D G3DSA:1.10.443.10 131 301 5.5E-30 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JV59_19100 8026bda837d92248a1c6c33a16879d9d 318 Pfam PF00589 Phage integrase family 137 297 3.2E-7 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JV59_19100 8026bda837d92248a1c6c33a16879d9d 318 SUPERFAMILY SSF47823 33 124 2.75E-21 T 14-10-2018 JV59_19100 8026bda837d92248a1c6c33a16879d9d 318 Gene3D G3DSA:1.10.150.130 28 128 6.2E-19 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal JV59_19100 8026bda837d92248a1c6c33a16879d9d 318 SUPERFAMILY SSF56349 131 303 2.3E-28 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JV59_02205 5990702140a95afcb31828b829aa7bfe 459 Gene3D G3DSA:3.30.230.10 328 459 3.9E-16 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JV59_02205 5990702140a95afcb31828b829aa7bfe 459 Gene3D G3DSA:3.40.50.300 68 281 6.7E-40 T 14-10-2018 JV59_02205 5990702140a95afcb31828b829aa7bfe 459 Pfam PF13481 AAA domain 85 224 1.6E-14 T 14-10-2018 JV59_02205 5990702140a95afcb31828b829aa7bfe 459 SUPERFAMILY SSF54211 257 456 2.39E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JV59_02205 5990702140a95afcb31828b829aa7bfe 459 SUPERFAMILY SSF52540 70 294 1.31E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_02205 5990702140a95afcb31828b829aa7bfe 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 2.3E-9 T 14-10-2018 JV59_02205 5990702140a95afcb31828b829aa7bfe 459 PRINTS PR01874 DNA repair protein radA signature 324 347 9.8E-94 T 14-10-2018 JV59_02205 5990702140a95afcb31828b829aa7bfe 459 PRINTS PR01874 DNA repair protein radA signature 85 113 9.8E-94 T 14-10-2018 JV59_02205 5990702140a95afcb31828b829aa7bfe 459 PRINTS PR01874 DNA repair protein radA signature 215 243 9.8E-94 T 14-10-2018 JV59_02205 5990702140a95afcb31828b829aa7bfe 459 PRINTS PR01874 DNA repair protein radA signature 10 34 9.8E-94 T 14-10-2018 JV59_02205 5990702140a95afcb31828b829aa7bfe 459 PRINTS PR01874 DNA repair protein radA signature 126 143 9.8E-94 T 14-10-2018 JV59_02205 5990702140a95afcb31828b829aa7bfe 459 PRINTS PR01874 DNA repair protein radA signature 176 200 9.8E-94 T 14-10-2018 JV59_02205 5990702140a95afcb31828b829aa7bfe 459 PRINTS PR01874 DNA repair protein radA signature 250 276 9.8E-94 T 14-10-2018 JV59_02205 5990702140a95afcb31828b829aa7bfe 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 4.6E-225 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 JV59_02205 5990702140a95afcb31828b829aa7bfe 459 SMART SM00382 93 246 5.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_02205 5990702140a95afcb31828b829aa7bfe 459 Hamap MF_01498 DNA repair protein RadA [radA]. 21 457 43.203 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 JV59_30705 b3488a51ab53833fdc2ceb6beb30d2c6 766 Gene3D G3DSA:1.20.1480.50 137 229 6.3E-7 T 14-10-2018 JV59_30705 b3488a51ab53833fdc2ceb6beb30d2c6 766 Gene3D G3DSA:3.30.565.10 307 472 2.7E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_30705 b3488a51ab53833fdc2ceb6beb30d2c6 766 SMART SM00387 352 468 1.0E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_30705 b3488a51ab53833fdc2ceb6beb30d2c6 766 SUPERFAMILY SSF52172 488 611 1.24E-38 T 14-10-2018 IPR011006 CheY-like superfamily JV59_30705 b3488a51ab53833fdc2ceb6beb30d2c6 766 SMART SM00304 173 225 1.6E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_30705 b3488a51ab53833fdc2ceb6beb30d2c6 766 Gene3D G3DSA:3.40.50.2300 473 608 2.7E-43 T 14-10-2018 JV59_30705 b3488a51ab53833fdc2ceb6beb30d2c6 766 Gene3D G3DSA:1.20.120.160 640 755 5.1E-18 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_30705 b3488a51ab53833fdc2ceb6beb30d2c6 766 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 467 2.9E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_30705 b3488a51ab53833fdc2ceb6beb30d2c6 766 SUPERFAMILY SSF55874 294 466 1.17E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_30705 b3488a51ab53833fdc2ceb6beb30d2c6 766 SUPERFAMILY SSF47226 646 754 8.24E-20 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_30705 b3488a51ab53833fdc2ceb6beb30d2c6 766 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 304 2.0E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_30705 b3488a51ab53833fdc2ceb6beb30d2c6 766 SUPERFAMILY SSF158472 174 222 9.55E-5 T 14-10-2018 JV59_30705 b3488a51ab53833fdc2ceb6beb30d2c6 766 Pfam PF01627 Hpt domain 670 745 7.7E-6 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 JV59_30705 b3488a51ab53833fdc2ceb6beb30d2c6 766 SUPERFAMILY SSF47384 226 305 1.04E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_30705 b3488a51ab53833fdc2ceb6beb30d2c6 766 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 421 8.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_30705 b3488a51ab53833fdc2ceb6beb30d2c6 766 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 407 8.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_30705 b3488a51ab53833fdc2ceb6beb30d2c6 766 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 465 8.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_30705 b3488a51ab53833fdc2ceb6beb30d2c6 766 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 446 8.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_30705 b3488a51ab53833fdc2ceb6beb30d2c6 766 SMART SM00388 240 305 1.5E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_30705 b3488a51ab53833fdc2ceb6beb30d2c6 766 SMART SM00448 490 605 3.3E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_30705 b3488a51ab53833fdc2ceb6beb30d2c6 766 Gene3D G3DSA:1.10.287.130 230 306 8.7E-22 T 14-10-2018 JV59_30705 b3488a51ab53833fdc2ceb6beb30d2c6 766 Pfam PF00072 Response regulator receiver domain 492 606 1.7E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_27665 3ae2bed0c60bd4fe96a85afcee72b2bf 144 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 96 140 4.3E-9 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JV59_27665 3ae2bed0c60bd4fe96a85afcee72b2bf 144 Pfam PF00460 Flagella basal body rod protein 9 32 2.5E-6 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 JV59_27665 3ae2bed0c60bd4fe96a85afcee72b2bf 144 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 7 142 1.1E-40 T 14-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 JV59_29340 69d2d65aeeb383f07e1d0aca1954f2b8 329 Gene3D G3DSA:3.40.50.2300 164 287 2.8E-62 T 14-10-2018 JV59_29340 69d2d65aeeb383f07e1d0aca1954f2b8 329 SUPERFAMILY SSF53822 58 318 2.78E-55 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_29340 69d2d65aeeb383f07e1d0aca1954f2b8 329 SMART SM00354 1 71 1.3E-33 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_29340 69d2d65aeeb383f07e1d0aca1954f2b8 329 Gene3D G3DSA:3.40.50.2300 65 311 2.8E-62 T 14-10-2018 JV59_29340 69d2d65aeeb383f07e1d0aca1954f2b8 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.1E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_29340 69d2d65aeeb383f07e1d0aca1954f2b8 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.1E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_29340 69d2d65aeeb383f07e1d0aca1954f2b8 329 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 JV59_29340 69d2d65aeeb383f07e1d0aca1954f2b8 329 Pfam PF13377 Periplasmic binding protein-like domain 170 329 1.2E-24 T 14-10-2018 JV59_29340 69d2d65aeeb383f07e1d0aca1954f2b8 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 1.5E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_29340 69d2d65aeeb383f07e1d0aca1954f2b8 329 SUPERFAMILY SSF47413 1 60 4.35E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_29340 69d2d65aeeb383f07e1d0aca1954f2b8 329 Gene3D G3DSA:1.10.260.40 1 59 6.4E-21 T 14-10-2018 JV59_17070 a922bd62c5785e457c5007fcbf6f6244 93 Pfam PF06865 Protein of unknown function (DUF1255) 3 92 4.2E-35 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 JV59_17070 a922bd62c5785e457c5007fcbf6f6244 93 SUPERFAMILY SSF51182 1 93 1.26E-35 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JV59_17070 a922bd62c5785e457c5007fcbf6f6244 93 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 1 93 26.123 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 JV59_17070 a922bd62c5785e457c5007fcbf6f6244 93 Gene3D G3DSA:2.60.120.10 1 93 8.3E-37 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_20805 de85c16c0c44cfdcede1e7e55974b176 379 Gene3D G3DSA:2.40.420.20 306 370 1.5E-48 T 14-10-2018 JV59_20805 de85c16c0c44cfdcede1e7e55974b176 379 Pfam PF13533 Biotin-lipoyl like 68 119 2.0E-9 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain JV59_20805 de85c16c0c44cfdcede1e7e55974b176 379 Gene3D G3DSA:1.10.287.470 105 179 1.5E-48 T 14-10-2018 JV59_20805 de85c16c0c44cfdcede1e7e55974b176 379 Pfam PF13437 HlyD family secretion protein 183 292 1.4E-8 T 14-10-2018 JV59_20805 de85c16c0c44cfdcede1e7e55974b176 379 Gene3D G3DSA:2.40.50.100 68 213 1.5E-48 T 14-10-2018 JV59_20805 de85c16c0c44cfdcede1e7e55974b176 379 Gene3D G3DSA:2.40.30.170 61 305 1.5E-48 T 14-10-2018 JV59_20805 de85c16c0c44cfdcede1e7e55974b176 379 SUPERFAMILY SSF111369 61 232 3.66E-20 T 14-10-2018 JV59_20805 de85c16c0c44cfdcede1e7e55974b176 379 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 372 5.0E-41 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 JV59_24485 08d376d6160506f3c7d2f94e88b4cdf4 697 Gene3D G3DSA:2.40.170.20 171 697 1.6E-95 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily JV59_24485 08d376d6160506f3c7d2f94e88b4cdf4 697 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 159 2.1E-16 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain JV59_24485 08d376d6160506f3c7d2f94e88b4cdf4 697 Gene3D G3DSA:2.170.130.10 43 170 2.3E-31 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily JV59_24485 08d376d6160506f3c7d2f94e88b4cdf4 697 Pfam PF00593 TonB dependent receptor 240 695 2.2E-50 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel JV59_24485 08d376d6160506f3c7d2f94e88b4cdf4 697 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 63 695 8.9E-94 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 JV59_24485 08d376d6160506f3c7d2f94e88b4cdf4 697 SUPERFAMILY SSF56935 27 696 2.9E-119 T 14-10-2018 JV59_25565 c9e5c5e1b54acf894405e4ef56c66116 399 SUPERFAMILY SSF141868 2 189 1.7E-28 T 14-10-2018 IPR035919 EAL domain superfamily JV59_25565 c9e5c5e1b54acf894405e4ef56c66116 399 Pfam PF08668 HDOD domain 203 318 2.1E-12 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD JV59_25565 c9e5c5e1b54acf894405e4ef56c66116 399 PIRSF PIRSF003180 1 399 5.7E-125 T 14-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing JV59_25565 c9e5c5e1b54acf894405e4ef56c66116 399 Gene3D G3DSA:3.20.20.450 1 200 5.1E-19 T 14-10-2018 IPR035919 EAL domain superfamily JV59_25565 c9e5c5e1b54acf894405e4ef56c66116 399 SUPERFAMILY SSF109604 178 396 4.39E-28 T 14-10-2018 JV59_25565 c9e5c5e1b54acf894405e4ef56c66116 399 SMART SM00052 1 192 1.8E-4 T 14-10-2018 IPR001633 EAL domain JV59_25565 c9e5c5e1b54acf894405e4ef56c66116 399 Gene3D G3DSA:1.10.3210.10 201 390 3.6E-14 T 14-10-2018 JV59_25565 c9e5c5e1b54acf894405e4ef56c66116 399 Pfam PF00563 EAL domain 78 187 6.8E-11 T 14-10-2018 IPR001633 EAL domain JV59_29945 60b49858f751cf6052e18807b79b0c46 214 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 4 206 5.2E-78 T 14-10-2018 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5523 JV59_29945 60b49858f751cf6052e18807b79b0c46 214 Pfam PF00881 Nitroreductase family 15 182 2.6E-27 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 JV59_29945 60b49858f751cf6052e18807b79b0c46 214 Gene3D G3DSA:3.40.109.10 2 187 3.3E-53 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JV59_29945 60b49858f751cf6052e18807b79b0c46 214 SUPERFAMILY SSF55469 8 213 1.96E-47 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JV59_01480 6bae5d3c5556c763e0103662857c0d8c 629 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 226 255 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 JV59_01480 6bae5d3c5556c763e0103662857c0d8c 629 SUPERFAMILY SSF51230 104 195 3.27E-22 T 14-10-2018 IPR011053 Single hybrid motif JV59_01480 6bae5d3c5556c763e0103662857c0d8c 629 Pfam PF02817 e3 binding domain 322 356 3.3E-14 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 JV59_01480 6bae5d3c5556c763e0103662857c0d8c 629 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 398 628 2.1E-79 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 JV59_01480 6bae5d3c5556c763e0103662857c0d8c 629 Gene3D G3DSA:3.30.559.10 382 629 6.1E-96 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JV59_01480 6bae5d3c5556c763e0103662857c0d8c 629 Gene3D G3DSA:2.40.50.100 104 181 1.8E-20 T 14-10-2018 JV59_01480 6bae5d3c5556c763e0103662857c0d8c 629 Gene3D G3DSA:2.40.50.100 1 80 5.0E-22 T 14-10-2018 JV59_01480 6bae5d3c5556c763e0103662857c0d8c 629 Gene3D G3DSA:2.40.50.100 202 280 2.4E-20 T 14-10-2018 JV59_01480 6bae5d3c5556c763e0103662857c0d8c 629 SUPERFAMILY SSF47005 315 360 7.59E-13 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 JV59_01480 6bae5d3c5556c763e0103662857c0d8c 629 SUPERFAMILY SSF52777 387 628 1.96E-80 T 14-10-2018 JV59_01480 6bae5d3c5556c763e0103662857c0d8c 629 SUPERFAMILY SSF51230 203 295 1.96E-23 T 14-10-2018 IPR011053 Single hybrid motif JV59_01480 6bae5d3c5556c763e0103662857c0d8c 629 Gene3D G3DSA:4.10.320.10 321 366 1.0E-20 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 JV59_01480 6bae5d3c5556c763e0103662857c0d8c 629 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 127 156 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 JV59_01480 6bae5d3c5556c763e0103662857c0d8c 629 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 188 629 7.0E-205 T 14-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 JV59_01480 6bae5d3c5556c763e0103662857c0d8c 629 SUPERFAMILY SSF51230 1 94 7.33E-24 T 14-10-2018 IPR011053 Single hybrid motif JV59_01480 6bae5d3c5556c763e0103662857c0d8c 629 Pfam PF00364 Biotin-requiring enzyme 105 175 8.4E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment JV59_01480 6bae5d3c5556c763e0103662857c0d8c 629 Pfam PF00364 Biotin-requiring enzyme 204 274 2.8E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment JV59_01480 6bae5d3c5556c763e0103662857c0d8c 629 Pfam PF00364 Biotin-requiring enzyme 4 73 5.8E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment JV59_01480 6bae5d3c5556c763e0103662857c0d8c 629 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 JV59_22755 99039dbdec3818a6740b7e2184f75238 678 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 648 0.0 T 14-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 JV59_22755 99039dbdec3818a6740b7e2184f75238 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 5.4E-93 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_22755 99039dbdec3818a6740b7e2184f75238 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 5.4E-93 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_22755 99039dbdec3818a6740b7e2184f75238 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 5.4E-93 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_22755 99039dbdec3818a6740b7e2184f75238 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 5.4E-93 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_22755 99039dbdec3818a6740b7e2184f75238 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 5.4E-93 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_22755 99039dbdec3818a6740b7e2184f75238 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 5.4E-93 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_22755 99039dbdec3818a6740b7e2184f75238 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 5.4E-93 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_22755 99039dbdec3818a6740b7e2184f75238 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 5.4E-93 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_22755 99039dbdec3818a6740b7e2184f75238 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 5.4E-93 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_22755 99039dbdec3818a6740b7e2184f75238 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 5.4E-93 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_22755 99039dbdec3818a6740b7e2184f75238 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 5.4E-93 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_22755 99039dbdec3818a6740b7e2184f75238 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 5.4E-93 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_22755 99039dbdec3818a6740b7e2184f75238 678 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_22755 99039dbdec3818a6740b7e2184f75238 678 Gene3D G3DSA:1.20.210.10 30 562 1.2E-182 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_22755 99039dbdec3818a6740b7e2184f75238 678 SUPERFAMILY SSF81442 43 557 2.35E-174 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_22755 99039dbdec3818a6740b7e2184f75238 678 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 57 502 5.8E-131 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_36150 ec49a29bb9ad058a468f67b379bcba03 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 345 3.8E-159 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 JV59_36150 ec49a29bb9ad058a468f67b379bcba03 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.42 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 JV59_36150 ec49a29bb9ad058a468f67b379bcba03 350 Pfam PF02547 Queuosine biosynthesis protein 3 345 2.2E-134 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 JV59_36150 ec49a29bb9ad058a468f67b379bcba03 350 Gene3D G3DSA:2.40.10.240 64 163 2.2E-118 T 14-10-2018 JV59_36150 ec49a29bb9ad058a468f67b379bcba03 350 Gene3D G3DSA:3.40.1780.10 14 345 2.2E-118 T 14-10-2018 JV59_36150 ec49a29bb9ad058a468f67b379bcba03 350 SUPERFAMILY SSF111337 1 345 1.27E-138 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 JV59_22055 f4e906627ee8cbadfb3dcc17743e7280 232 SUPERFAMILY SSF55781 64 224 7.85E-22 T 14-10-2018 JV59_22055 f4e906627ee8cbadfb3dcc17743e7280 232 SUPERFAMILY SSF46785 8 74 3.9E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_22055 f4e906627ee8cbadfb3dcc17743e7280 232 Gene3D G3DSA:1.10.10.10 2 75 2.0E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_22055 f4e906627ee8cbadfb3dcc17743e7280 232 Pfam PF09339 IclR helix-turn-helix domain 10 57 2.1E-14 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JV59_22055 f4e906627ee8cbadfb3dcc17743e7280 232 SMART SM00346 8 97 2.6E-13 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JV59_22055 f4e906627ee8cbadfb3dcc17743e7280 232 Gene3D G3DSA:3.30.450.40 76 230 7.0E-22 T 14-10-2018 IPR029016 GAF-like domain superfamily JV59_22055 f4e906627ee8cbadfb3dcc17743e7280 232 Pfam PF01614 Bacterial transcriptional regulator 127 224 1.3E-10 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal JV59_01425 e5b7cfef0f7f4f6562dc2fa0e0665a41 411 Gene3D G3DSA:1.20.81.30 62 180 2.5E-25 T 14-10-2018 JV59_01425 e5b7cfef0f7f4f6562dc2fa0e0665a41 411 Pfam PF00482 Type II secretion system (T2SS), protein F 76 199 1.1E-25 T 14-10-2018 IPR018076 Type II secretion system F domain JV59_01425 e5b7cfef0f7f4f6562dc2fa0e0665a41 411 Pfam PF00482 Type II secretion system (T2SS), protein F 280 402 8.3E-29 T 14-10-2018 IPR018076 Type II secretion system F domain JV59_01425 e5b7cfef0f7f4f6562dc2fa0e0665a41 411 Gene3D G3DSA:1.20.81.30 263 374 4.3E-30 T 14-10-2018 JV59_01425 e5b7cfef0f7f4f6562dc2fa0e0665a41 411 PRINTS PR00812 Bacterial general secretion pathway protein F signature 171 199 5.6E-15 T 14-10-2018 IPR003004 GspF/PilC family JV59_01425 e5b7cfef0f7f4f6562dc2fa0e0665a41 411 PRINTS PR00812 Bacterial general secretion pathway protein F signature 72 84 5.6E-15 T 14-10-2018 IPR003004 GspF/PilC family JV59_01425 e5b7cfef0f7f4f6562dc2fa0e0665a41 411 PRINTS PR00812 Bacterial general secretion pathway protein F signature 391 410 5.6E-15 T 14-10-2018 IPR003004 GspF/PilC family JV59_01425 e5b7cfef0f7f4f6562dc2fa0e0665a41 411 PRINTS PR00812 Bacterial general secretion pathway protein F signature 375 389 5.6E-15 T 14-10-2018 IPR003004 GspF/PilC family JV59_20995 5ea8ff9701a24950f29727767dbe3ff8 304 SUPERFAMILY SSF103481 182 283 1.7E-12 T 14-10-2018 JV59_20995 5ea8ff9701a24950f29727767dbe3ff8 304 Pfam PF00892 EamA-like transporter family 146 281 2.3E-22 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_20995 5ea8ff9701a24950f29727767dbe3ff8 304 Pfam PF00892 EamA-like transporter family 13 136 9.8E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_20995 5ea8ff9701a24950f29727767dbe3ff8 304 SUPERFAMILY SSF103481 43 139 1.18E-13 T 14-10-2018 JV59_27015 37fdd07dd0d861c057f5194fe0c353d9 315 SUPERFAMILY SSF47413 3 60 8.26E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_27015 37fdd07dd0d861c057f5194fe0c353d9 315 Gene3D G3DSA:3.40.50.2300 163 279 1.4E-61 T 14-10-2018 JV59_27015 37fdd07dd0d861c057f5194fe0c353d9 315 SMART SM00354 4 74 1.4E-29 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_27015 37fdd07dd0d861c057f5194fe0c353d9 315 Gene3D G3DSA:1.10.260.40 2 60 7.7E-20 T 14-10-2018 JV59_27015 37fdd07dd0d861c057f5194fe0c353d9 315 Gene3D G3DSA:3.40.50.2300 68 303 1.4E-61 T 14-10-2018 JV59_27015 37fdd07dd0d861c057f5194fe0c353d9 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 311 1.1E-139 T 14-10-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 JV59_27015 37fdd07dd0d861c057f5194fe0c353d9 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 14-10-2018 JV59_27015 37fdd07dd0d861c057f5194fe0c353d9 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 3.4E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_27015 37fdd07dd0d861c057f5194fe0c353d9 315 SUPERFAMILY SSF53822 63 307 9.23E-58 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_27015 37fdd07dd0d861c057f5194fe0c353d9 315 Pfam PF13377 Periplasmic binding protein-like domain 168 306 2.3E-19 T 14-10-2018 JV59_18970 f66e5c9e5b2f996f60e87fe9852160a6 578 SUPERFAMILY SSF52794 121 222 1.64E-37 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 JV59_18970 f66e5c9e5b2f996f60e87fe9852160a6 578 Pfam PF02378 Phosphotransferase system, EIIC 246 509 2.9E-14 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 JV59_18970 f66e5c9e5b2f996f60e87fe9852160a6 578 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 123 206 5.8E-37 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 JV59_18970 f66e5c9e5b2f996f60e87fe9852160a6 578 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 228 565 6.5E-139 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 JV59_18970 f66e5c9e5b2f996f60e87fe9852160a6 578 Gene3D G3DSA:3.40.50.2300 1 104 9.3E-26 T 14-10-2018 JV59_18970 f66e5c9e5b2f996f60e87fe9852160a6 578 SUPERFAMILY SSF52794 2 101 2.44E-29 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 JV59_18970 f66e5c9e5b2f996f60e87fe9852160a6 578 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 1.3E-15 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 JV59_18970 f66e5c9e5b2f996f60e87fe9852160a6 578 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 124 213 5.8E-18 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 JV59_18970 f66e5c9e5b2f996f60e87fe9852160a6 578 Gene3D G3DSA:3.40.50.2300 112 222 6.8E-42 T 14-10-2018 JV59_37310 1944cef6a9dce48de3b40e891a3a0972 330 Pfam PF01435 Peptidase family M48 155 330 4.9E-25 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 JV59_26115 31c770792c3223850100ef26de0d5226 156 Gene3D G3DSA:1.10.455.10 2 155 2.7E-64 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily JV59_26115 31c770792c3223850100ef26de0d5226 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 2.6E-71 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 JV59_26115 31c770792c3223850100ef26de0d5226 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.0E-65 T 14-10-2018 IPR023798 Ribosomal protein S7 domain JV59_26115 31c770792c3223850100ef26de0d5226 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_26115 31c770792c3223850100ef26de0d5226 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.93 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 JV59_26115 31c770792c3223850100ef26de0d5226 156 PIRSF PIRSF002122 3 156 3.0E-63 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 JV59_26115 31c770792c3223850100ef26de0d5226 156 SUPERFAMILY SSF47973 6 149 1.27E-59 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily JV59_19890 2300eba065020419c9b98d45c83d1f74 296 SUPERFAMILY SSF53850 88 291 3.8E-13 T 14-10-2018 JV59_19890 2300eba065020419c9b98d45c83d1f74 296 SUPERFAMILY SSF46785 3 82 7.92E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_19890 2300eba065020419c9b98d45c83d1f74 296 Gene3D G3DSA:3.40.190.10 88 263 1.8E-11 T 14-10-2018 JV59_19890 2300eba065020419c9b98d45c83d1f74 296 Pfam PF03466 LysR substrate binding domain 98 272 4.5E-7 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_19890 2300eba065020419c9b98d45c83d1f74 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.1E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_19890 2300eba065020419c9b98d45c83d1f74 296 Gene3D G3DSA:3.40.190.10 169 262 1.8E-11 T 14-10-2018 JV59_19890 2300eba065020419c9b98d45c83d1f74 296 Gene3D G3DSA:1.10.10.10 3 85 4.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_29370 5a34e55fe46689702a04f59eafe59d01 401 Gene3D G3DSA:1.10.3210.10 199 397 1.3E-16 T 14-10-2018 JV59_29370 5a34e55fe46689702a04f59eafe59d01 401 Pfam PF08668 HDOD domain 207 321 1.3E-12 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD JV59_29370 5a34e55fe46689702a04f59eafe59d01 401 SUPERFAMILY SSF141868 7 193 1.96E-26 T 14-10-2018 IPR035919 EAL domain superfamily JV59_29370 5a34e55fe46689702a04f59eafe59d01 401 SMART SM00052 3 197 5.9E-4 T 14-10-2018 IPR001633 EAL domain JV59_29370 5a34e55fe46689702a04f59eafe59d01 401 SUPERFAMILY SSF109604 183 400 5.65E-33 T 14-10-2018 JV59_29370 5a34e55fe46689702a04f59eafe59d01 401 Gene3D G3DSA:3.20.20.450 3 198 3.6E-16 T 14-10-2018 IPR035919 EAL domain superfamily JV59_29370 5a34e55fe46689702a04f59eafe59d01 401 PIRSF PIRSF003180 3 401 2.4E-119 T 14-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing JV59_29370 5a34e55fe46689702a04f59eafe59d01 401 Pfam PF00563 EAL domain 82 192 1.9E-11 T 14-10-2018 IPR001633 EAL domain JV59_19185 e3cecb2746df11559d4c983de6b45401 234 SUPERFAMILY SSF52172 3 119 2.13E-23 T 14-10-2018 IPR011006 CheY-like superfamily JV59_19185 e3cecb2746df11559d4c983de6b45401 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 230 2.4E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_19185 e3cecb2746df11559d4c983de6b45401 234 SMART SM00862 154 230 4.4E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_19185 e3cecb2746df11559d4c983de6b45401 234 SUPERFAMILY SSF46894 130 231 1.5E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_19185 e3cecb2746df11559d4c983de6b45401 234 Pfam PF00072 Response regulator receiver domain 6 113 1.3E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_19185 e3cecb2746df11559d4c983de6b45401 234 SMART SM00448 4 114 3.4E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_19185 e3cecb2746df11559d4c983de6b45401 234 Gene3D G3DSA:1.10.10.10 129 233 1.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_19185 e3cecb2746df11559d4c983de6b45401 234 Gene3D G3DSA:3.40.50.2300 3 128 3.9E-21 T 14-10-2018 JV59_35445 44e966184aa79133c590b08e49964bf9 294 Pfam PF00348 Polyprenyl synthetase 29 269 1.6E-56 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 JV59_35445 44e966184aa79133c590b08e49964bf9 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site JV59_35445 44e966184aa79133c590b08e49964bf9 294 SUPERFAMILY SSF48576 4 285 8.64E-86 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily JV59_35445 44e966184aa79133c590b08e49964bf9 294 Gene3D G3DSA:1.10.600.10 1 294 3.4E-112 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily JV59_35445 44e966184aa79133c590b08e49964bf9 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site JV59_30885 5b8cd8bcd959ed3bb56c34934baa4b38 192 Pfam PF00857 Isochorismatase family 4 178 2.7E-35 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 JV59_30885 5b8cd8bcd959ed3bb56c34934baa4b38 192 SUPERFAMILY SSF52499 2 178 1.96E-44 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 JV59_30885 5b8cd8bcd959ed3bb56c34934baa4b38 192 Gene3D G3DSA:3.40.50.850 1 191 7.6E-46 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 JV59_17775 c3371370249183943edef2705716967a 409 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 JV59_17775 c3371370249183943edef2705716967a 409 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 177 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 JV59_17775 c3371370249183943edef2705716967a 409 Pfam PF07687 Peptidase dimerisation domain 206 301 5.0E-10 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain JV59_17775 c3371370249183943edef2705716967a 409 SUPERFAMILY SSF53187 1 400 1.09E-80 T 14-10-2018 JV59_17775 c3371370249183943edef2705716967a 409 SUPERFAMILY SSF55031 209 319 4.08E-38 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain JV59_17775 c3371370249183943edef2705716967a 409 Gene3D G3DSA:3.30.70.360 209 319 1.6E-173 T 14-10-2018 JV59_17775 c3371370249183943edef2705716967a 409 PIRSF PIRSF037215 1 407 2.9E-182 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 JV59_17775 c3371370249183943edef2705716967a 409 Hamap MF_00550 Peptidase T [pepT]. 1 404 56.222 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 JV59_17775 c3371370249183943edef2705716967a 409 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 403 6.3E-159 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 JV59_17775 c3371370249183943edef2705716967a 409 Pfam PF01546 Peptidase family M20/M25/M40 139 400 1.2E-13 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 JV59_17775 c3371370249183943edef2705716967a 409 Gene3D G3DSA:3.40.630.10 4 400 1.6E-173 T 14-10-2018 JV59_26595 8fef94080dff9f2cefd0f3442a860f66 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 JV59_26595 8fef94080dff9f2cefd0f3442a860f66 112 SUPERFAMILY SSF54913 1 112 7.63E-45 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta JV59_26595 8fef94080dff9f2cefd0f3442a860f66 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.9E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JV59_26595 8fef94080dff9f2cefd0f3442a860f66 112 SMART SM00938 4 105 2.8E-68 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JV59_26595 8fef94080dff9f2cefd0f3442a860f66 112 PRINTS PR00340 P-II protein signature 23 41 3.8E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JV59_26595 8fef94080dff9f2cefd0f3442a860f66 112 PRINTS PR00340 P-II protein signature 83 103 3.8E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JV59_26595 8fef94080dff9f2cefd0f3442a860f66 112 PRINTS PR00340 P-II protein signature 52 75 3.8E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JV59_26595 8fef94080dff9f2cefd0f3442a860f66 112 PRINTS PR00340 P-II protein signature 2 17 3.8E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JV59_26595 8fef94080dff9f2cefd0f3442a860f66 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 JV59_26595 8fef94080dff9f2cefd0f3442a860f66 112 PIRSF PIRSF039144 1 112 2.4E-55 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JV59_26595 8fef94080dff9f2cefd0f3442a860f66 112 Gene3D G3DSA:3.30.70.120 1 112 1.6E-46 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JV59_35935 85d9ec48ca45a1350e810924b1300108 422 SUPERFAMILY SSF55681 4 320 6.57E-105 T 14-10-2018 JV59_35935 85d9ec48ca45a1350e810924b1300108 422 Pfam PF13393 Histidyl-tRNA synthetase 10 312 2.8E-46 T 14-10-2018 JV59_35935 85d9ec48ca45a1350e810924b1300108 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 408 8.6E-158 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 JV59_35935 85d9ec48ca45a1350e810924b1300108 422 Gene3D G3DSA:3.30.930.10 2 323 8.8E-120 T 14-10-2018 JV59_35935 85d9ec48ca45a1350e810924b1300108 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 33.681 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 JV59_35935 85d9ec48ca45a1350e810924b1300108 422 PIRSF PIRSF001549 2 422 8.7E-125 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 JV59_35935 85d9ec48ca45a1350e810924b1300108 422 SUPERFAMILY SSF52954 327 421 1.64E-25 T 14-10-2018 JV59_35935 85d9ec48ca45a1350e810924b1300108 422 Gene3D G3DSA:3.40.50.800 326 422 7.7E-24 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily JV59_35935 85d9ec48ca45a1350e810924b1300108 422 Pfam PF03129 Anticodon binding domain 337 420 8.7E-8 T 14-10-2018 IPR004154 Anticodon-binding JV59_38695 63f767928f3a31307f60c754f3d0ae9b 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 224 2.0E-10 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JV59_38695 63f767928f3a31307f60c754f3d0ae9b 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 43.804 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 JV59_38695 63f767928f3a31307f60c754f3d0ae9b 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site JV59_38695 63f767928f3a31307f60c754f3d0ae9b 238 SUPERFAMILY SSF55666 153 237 1.96E-25 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JV59_38695 63f767928f3a31307f60c754f3d0ae9b 238 SUPERFAMILY SSF54211 1 181 4.76E-44 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JV59_38695 63f767928f3a31307f60c754f3d0ae9b 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 1.2E-111 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 JV59_38695 63f767928f3a31307f60c754f3d0ae9b 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 2.7E-23 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JV59_38695 63f767928f3a31307f60c754f3d0ae9b 238 Gene3D G3DSA:3.30.230.70 10 238 1.5E-62 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JV59_39395 290ba8beeffbcee9a64844d74bda007a 485 PIRSF PIRSF006247 1 485 6.5E-178 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 JV59_39395 290ba8beeffbcee9a64844d74bda007a 485 Pfam PF02386 Cation transport protein 39 477 1.1E-89 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 JV59_39395 290ba8beeffbcee9a64844d74bda007a 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 468 7.2E-115 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 JV59_29135 8826972612a4f44ec192dfcf97e9be1d 183 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.464 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 JV59_29135 8826972612a4f44ec192dfcf97e9be1d 183 Pfam PF04279 Intracellular septation protein A 1 174 4.2E-68 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 JV59_29135 8826972612a4f44ec192dfcf97e9be1d 183 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 176 5.4E-63 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 JV59_24770 493f4046b35b7349ee1fcddf378ecc85 301 Gene3D G3DSA:3.40.190.10 163 263 1.8E-64 T 14-10-2018 JV59_24770 493f4046b35b7349ee1fcddf378ecc85 301 Pfam PF03466 LysR substrate binding domain 89 290 4.5E-43 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_24770 493f4046b35b7349ee1fcddf378ecc85 301 SUPERFAMILY SSF53850 90 294 7.29E-44 T 14-10-2018 JV59_24770 493f4046b35b7349ee1fcddf378ecc85 301 Gene3D G3DSA:3.40.190.10 92 288 1.8E-64 T 14-10-2018 JV59_24770 493f4046b35b7349ee1fcddf378ecc85 301 Gene3D G3DSA:1.10.10.10 3 91 4.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_24770 493f4046b35b7349ee1fcddf378ecc85 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.7E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_24770 493f4046b35b7349ee1fcddf378ecc85 301 SUPERFAMILY SSF46785 6 112 9.81E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_34595 0fef09b2db02202b489b602b189328b0 616 Gene3D G3DSA:3.90.226.10 315 540 2.2E-161 T 14-10-2018 JV59_34595 0fef09b2db02202b489b602b189328b0 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 540 6.2E-53 T 14-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 JV59_34595 0fef09b2db02202b489b602b189328b0 616 PIRSF PIRSF001217 8 616 6.9E-227 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 JV59_34595 0fef09b2db02202b489b602b189328b0 616 Gene3D G3DSA:3.40.1750.10 186 497 2.2E-161 T 14-10-2018 JV59_34595 0fef09b2db02202b489b602b189328b0 616 Gene3D G3DSA:3.90.226.10 94 314 2.2E-161 T 14-10-2018 JV59_34595 0fef09b2db02202b489b602b189328b0 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 2.3E-193 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 JV59_34595 0fef09b2db02202b489b602b189328b0 616 Pfam PF01343 Peptidase family S49 138 291 2.3E-31 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 JV59_34595 0fef09b2db02202b489b602b189328b0 616 Pfam PF01343 Peptidase family S49 392 541 1.3E-45 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 JV59_34595 0fef09b2db02202b489b602b189328b0 616 SUPERFAMILY SSF52096 324 529 6.63E-41 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JV59_34595 0fef09b2db02202b489b602b189328b0 616 SUPERFAMILY SSF52096 38 284 3.55E-28 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JV59_36130 4c03ff6db33a27c32c147b719bd785ad 315 Gene3D G3DSA:1.20.1640.10 105 300 3.0E-12 T 14-10-2018 JV59_36130 4c03ff6db33a27c32c147b719bd785ad 315 SUPERFAMILY SSF82866 74 293 1.96E-41 T 14-10-2018 JV59_36130 4c03ff6db33a27c32c147b719bd785ad 315 Pfam PF02355 Protein export membrane protein 111 292 7.3E-71 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial JV59_36130 4c03ff6db33a27c32c147b719bd785ad 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 117 282 4.1E-56 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JV59_36130 4c03ff6db33a27c32c147b719bd785ad 315 Pfam PF07549 SecD/SecF GG Motif 35 60 7.3E-11 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site JV59_36130 4c03ff6db33a27c32c147b719bd785ad 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 1.1E-86 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 JV59_36130 4c03ff6db33a27c32c147b719bd785ad 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 29.53 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 JV59_36130 4c03ff6db33a27c32c147b719bd785ad 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 3.5E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JV59_36130 4c03ff6db33a27c32c147b719bd785ad 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 3.5E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JV59_36130 4c03ff6db33a27c32c147b719bd785ad 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 3.5E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JV59_36130 4c03ff6db33a27c32c147b719bd785ad 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 3.5E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JV59_32060 92d30c711bd307db41197dff09e45817 347 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 29 337 54.16 T 14-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 JV59_32060 92d30c711bd307db41197dff09e45817 347 Pfam PF05971 Protein of unknown function (DUF890) 28 334 1.6E-131 T 14-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 JV59_32060 92d30c711bd307db41197dff09e45817 347 Gene3D G3DSA:3.40.50.150 62 335 1.2E-75 T 14-10-2018 JV59_32060 92d30c711bd307db41197dff09e45817 347 SUPERFAMILY SSF53335 67 333 7.01E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_32060 92d30c711bd307db41197dff09e45817 347 PIRSF PIRSF029038 18 347 2.5E-149 T 14-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 JV59_22160 93fe26ec855b773cbe3c01ea12411019 127 Pfam PF01638 HxlR-like helix-turn-helix 27 113 8.1E-31 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type JV59_22160 93fe26ec855b773cbe3c01ea12411019 127 SUPERFAMILY SSF46785 14 123 1.39E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_22160 93fe26ec855b773cbe3c01ea12411019 127 Gene3D G3DSA:1.10.10.10 1 126 4.8E-44 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_22235 1e7530dd476d0bc7f02078adcaf52fa1 550 Gene3D G3DSA:1.20.1560.10 13 318 3.3E-34 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_22235 1e7530dd476d0bc7f02078adcaf52fa1 550 Gene3D G3DSA:3.40.50.300 326 550 1.9E-50 T 14-10-2018 JV59_22235 1e7530dd476d0bc7f02078adcaf52fa1 550 SUPERFAMILY SSF90123 15 316 7.32E-41 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_22235 1e7530dd476d0bc7f02078adcaf52fa1 550 SMART SM00382 357 537 4.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_22235 1e7530dd476d0bc7f02078adcaf52fa1 550 SUPERFAMILY SSF52540 341 546 2.52E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_22235 1e7530dd476d0bc7f02078adcaf52fa1 550 Pfam PF00005 ABC transporter 348 497 8.1E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_22235 1e7530dd476d0bc7f02078adcaf52fa1 550 Pfam PF00664 ABC transporter transmembrane region 57 289 2.0E-17 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JV59_22235 1e7530dd476d0bc7f02078adcaf52fa1 550 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_37560 b65a23265ae199f42d6c9b3b99f82e26 619 Gene3D G3DSA:1.20.990.10 300 404 8.1E-71 T 14-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 JV59_37560 b65a23265ae199f42d6c9b3b99f82e26 619 Pfam PF00175 Oxidoreductase NAD-binding domain 477 583 5.2E-19 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 JV59_37560 b65a23265ae199f42d6c9b3b99f82e26 619 Gene3D G3DSA:3.40.50.80 465 619 2.8E-61 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JV59_37560 b65a23265ae199f42d6c9b3b99f82e26 619 Gene3D G3DSA:2.40.30.10 253 459 8.1E-71 T 14-10-2018 JV59_37560 b65a23265ae199f42d6c9b3b99f82e26 619 SUPERFAMILY SSF63380 248 465 3.4E-62 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JV59_37560 b65a23265ae199f42d6c9b3b99f82e26 619 SUPERFAMILY SSF52343 464 619 5.37E-53 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JV59_37560 b65a23265ae199f42d6c9b3b99f82e26 619 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 21 619 4.1E-256 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_37560 b65a23265ae199f42d6c9b3b99f82e26 619 Pfam PF00667 FAD binding domain 250 439 2.2E-27 T 14-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 JV59_37560 b65a23265ae199f42d6c9b3b99f82e26 619 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 406 413 3.2E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JV59_37560 b65a23265ae199f42d6c9b3b99f82e26 619 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 439 448 3.2E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JV59_37560 b65a23265ae199f42d6c9b3b99f82e26 619 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 545 561 3.2E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JV59_37560 b65a23265ae199f42d6c9b3b99f82e26 619 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 568 576 3.2E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JV59_37560 b65a23265ae199f42d6c9b3b99f82e26 619 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 290 300 3.2E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JV59_37560 b65a23265ae199f42d6c9b3b99f82e26 619 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 476 495 3.2E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JV59_37560 b65a23265ae199f42d6c9b3b99f82e26 619 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 501 510 3.2E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JV59_37560 b65a23265ae199f42d6c9b3b99f82e26 619 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 514 525 3.2E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JV59_37560 b65a23265ae199f42d6c9b3b99f82e26 619 Pfam PF00258 Flavodoxin 85 208 1.2E-28 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 JV59_37560 b65a23265ae199f42d6c9b3b99f82e26 619 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 13 619 49.705 T 14-10-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_37560 b65a23265ae199f42d6c9b3b99f82e26 619 SUPERFAMILY SSF52218 82 228 1.92E-45 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_37560 b65a23265ae199f42d6c9b3b99f82e26 619 PRINTS PR00369 Flavodoxin signature 132 143 7.1E-11 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 JV59_37560 b65a23265ae199f42d6c9b3b99f82e26 619 PRINTS PR00369 Flavodoxin signature 84 97 7.1E-11 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 JV59_37560 b65a23265ae199f42d6c9b3b99f82e26 619 PRINTS PR00369 Flavodoxin signature 188 207 7.1E-11 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 JV59_37560 b65a23265ae199f42d6c9b3b99f82e26 619 PRINTS PR00369 Flavodoxin signature 164 174 7.1E-11 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 JV59_37560 b65a23265ae199f42d6c9b3b99f82e26 619 PIRSF PIRSF000207 12 619 4.1E-275 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_37560 b65a23265ae199f42d6c9b3b99f82e26 619 Gene3D G3DSA:3.40.50.360 73 236 4.4E-46 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_02385 da5537eec8c486049dd214bda9a2608a 377 Hamap MF_00456 Glutamate 5-kinase [proB]. 12 266 35.548 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 JV59_02385 da5537eec8c486049dd214bda9a2608a 377 SUPERFAMILY SSF88697 284 374 2.1E-25 T 14-10-2018 IPR015947 PUA-like superfamily JV59_02385 da5537eec8c486049dd214bda9a2608a 377 SUPERFAMILY SSF53633 13 263 4.97E-65 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JV59_02385 da5537eec8c486049dd214bda9a2608a 377 Gene3D G3DSA:3.40.1160.10 6 272 4.3E-86 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JV59_02385 da5537eec8c486049dd214bda9a2608a 377 Pfam PF01472 PUA domain 284 357 5.9E-24 T 14-10-2018 IPR002478 PUA domain GO:0003723 JV59_02385 da5537eec8c486049dd214bda9a2608a 377 Gene3D G3DSA:2.30.130.10 273 375 4.6E-33 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 JV59_02385 da5537eec8c486049dd214bda9a2608a 377 PRINTS PR00474 Glutamate 5-kinase family signature 49 63 9.6E-54 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 JV59_02385 da5537eec8c486049dd214bda9a2608a 377 PRINTS PR00474 Glutamate 5-kinase family signature 155 182 9.6E-54 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 JV59_02385 da5537eec8c486049dd214bda9a2608a 377 PRINTS PR00474 Glutamate 5-kinase family signature 216 236 9.6E-54 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 JV59_02385 da5537eec8c486049dd214bda9a2608a 377 PRINTS PR00474 Glutamate 5-kinase family signature 83 111 9.6E-54 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 JV59_02385 da5537eec8c486049dd214bda9a2608a 377 PRINTS PR00474 Glutamate 5-kinase family signature 123 144 9.6E-54 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 JV59_02385 da5537eec8c486049dd214bda9a2608a 377 SMART SM00359 284 367 1.1E-17 T 14-10-2018 IPR002478 PUA domain GO:0003723 JV59_02385 da5537eec8c486049dd214bda9a2608a 377 PIRSF PIRSF000729 7 376 1.0E-136 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 JV59_02385 da5537eec8c486049dd214bda9a2608a 377 ProSitePatterns PS00902 Glutamate 5-kinase signature. 214 231 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 JV59_02385 da5537eec8c486049dd214bda9a2608a 377 TIGRFAM TIGR01027 proB: glutamate 5-kinase 12 374 1.3E-147 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 JV59_02385 da5537eec8c486049dd214bda9a2608a 377 Pfam PF00696 Amino acid kinase family 13 241 1.6E-41 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 JV59_34540 2a21a267775c7c35cca3451c7707cbbb 519 Pfam PF00916 Sulfate permease family 13 374 4.4E-57 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 JV59_34540 2a21a267775c7c35cca3451c7707cbbb 519 Gene3D G3DSA:3.30.750.24 409 499 1.2E-26 T 14-10-2018 IPR036513 STAS domain superfamily JV59_34540 2a21a267775c7c35cca3451c7707cbbb 519 SUPERFAMILY SSF52091 416 498 2.55E-11 T 14-10-2018 IPR036513 STAS domain superfamily JV59_34540 2a21a267775c7c35cca3451c7707cbbb 519 Pfam PF01740 STAS domain 417 503 9.7E-6 T 14-10-2018 IPR002645 STAS domain JV59_25830 f0bb900abff6a7daf86458fefc2f59f2 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 4.4E-62 T 14-10-2018 JV59_25830 f0bb900abff6a7daf86458fefc2f59f2 245 Gene3D G3DSA:3.40.50.720 4 244 2.2E-75 T 14-10-2018 JV59_25830 f0bb900abff6a7daf86458fefc2f59f2 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 6.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_25830 f0bb900abff6a7daf86458fefc2f59f2 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 6.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_25830 f0bb900abff6a7daf86458fefc2f59f2 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 6.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_25830 f0bb900abff6a7daf86458fefc2f59f2 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 184 3.9E-4 T 14-10-2018 JV59_25830 f0bb900abff6a7daf86458fefc2f59f2 245 SUPERFAMILY SSF51735 8 244 1.16E-77 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_25830 f0bb900abff6a7daf86458fefc2f59f2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_25830 f0bb900abff6a7daf86458fefc2f59f2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_25830 f0bb900abff6a7daf86458fefc2f59f2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 4.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_25830 f0bb900abff6a7daf86458fefc2f59f2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_25830 f0bb900abff6a7daf86458fefc2f59f2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_25830 f0bb900abff6a7daf86458fefc2f59f2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_28885 e0102399015e4709a352465d59b70365 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 1.3E-18 T 14-10-2018 IPR000362 Fumarate lyase family JV59_28885 e0102399015e4709a352465d59b70365 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 1.3E-18 T 14-10-2018 IPR000362 Fumarate lyase family JV59_28885 e0102399015e4709a352465d59b70365 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 1.3E-18 T 14-10-2018 IPR000362 Fumarate lyase family JV59_28885 e0102399015e4709a352465d59b70365 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 1.3E-18 T 14-10-2018 IPR000362 Fumarate lyase family JV59_28885 e0102399015e4709a352465d59b70365 456 Gene3D G3DSA:1.10.40.30 383 446 2.0E-159 T 14-10-2018 JV59_28885 e0102399015e4709a352465d59b70365 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 3.6E-151 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JV59_28885 e0102399015e4709a352465d59b70365 456 Gene3D G3DSA:1.10.275.10 1 117 2.6E-50 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal JV59_28885 e0102399015e4709a352465d59b70365 456 Gene3D G3DSA:1.20.200.10 118 447 2.0E-159 T 14-10-2018 JV59_28885 e0102399015e4709a352465d59b70365 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 JV59_28885 e0102399015e4709a352465d59b70365 456 SUPERFAMILY SSF48557 4 448 6.13E-110 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 JV59_28885 e0102399015e4709a352465d59b70365 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 2.3E-52 T 14-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 JV59_28885 e0102399015e4709a352465d59b70365 456 Pfam PF00206 Lyase 14 313 2.9E-74 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal JV59_19375 acd5e1c192c6012d9c07689f915abd3c 205 SMART SM00271 153 205 2.2E-6 T 14-10-2018 IPR001623 DnaJ domain JV59_19375 acd5e1c192c6012d9c07689f915abd3c 205 Gene3D G3DSA:1.10.287.110 148 205 3.8E-11 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JV59_19375 acd5e1c192c6012d9c07689f915abd3c 205 Pfam PF12339 DNA-J related protein 17 138 1.3E-41 T 14-10-2018 IPR021059 DnaJ-related protein, N-terminal JV59_19375 acd5e1c192c6012d9c07689f915abd3c 205 SUPERFAMILY SSF46565 117 204 3.79E-13 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JV59_19375 acd5e1c192c6012d9c07689f915abd3c 205 Pfam PF00226 DnaJ domain 159 204 2.2E-10 T 14-10-2018 IPR001623 DnaJ domain JV59_34995 08baa15de85e6d85d4810b88a8ea45bb 697 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 14-10-2018 IPR025505 FHIPEP conserved site JV59_34995 08baa15de85e6d85d4810b88a8ea45bb 697 Gene3D G3DSA:1.10.8.540 507 594 1.3E-23 T 14-10-2018 JV59_34995 08baa15de85e6d85d4810b88a8ea45bb 697 Pfam PF00771 FHIPEP family 32 687 1.0E-270 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JV59_34995 08baa15de85e6d85d4810b88a8ea45bb 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 1.2E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JV59_34995 08baa15de85e6d85d4810b88a8ea45bb 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 1.2E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JV59_34995 08baa15de85e6d85d4810b88a8ea45bb 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 1.2E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JV59_34995 08baa15de85e6d85d4810b88a8ea45bb 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 1.2E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JV59_34995 08baa15de85e6d85d4810b88a8ea45bb 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 1.2E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JV59_34995 08baa15de85e6d85d4810b88a8ea45bb 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 1.2E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JV59_34995 08baa15de85e6d85d4810b88a8ea45bb 697 PIRSF PIRSF005419 12 697 1.3E-254 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JV59_34995 08baa15de85e6d85d4810b88a8ea45bb 697 Gene3D G3DSA:1.10.490.80 598 695 7.7E-15 T 14-10-2018 JV59_34995 08baa15de85e6d85d4810b88a8ea45bb 697 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 694 3.8E-267 T 14-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 JV59_34995 08baa15de85e6d85d4810b88a8ea45bb 697 Gene3D G3DSA:3.40.30.60 363 506 1.1E-53 T 14-10-2018 JV59_26835 8efbc02cb5982ffd65bd8d23a7010145 216 Pfam PF00677 Lumazine binding domain 100 184 2.1E-23 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JV59_26835 8efbc02cb5982ffd65bd8d23a7010145 216 Pfam PF00677 Lumazine binding domain 3 87 1.5E-20 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JV59_26835 8efbc02cb5982ffd65bd8d23a7010145 216 Gene3D G3DSA:2.40.30.20 102 205 2.0E-35 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_26835 8efbc02cb5982ffd65bd8d23a7010145 216 SUPERFAMILY SSF63380 93 196 1.36E-31 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JV59_26835 8efbc02cb5982ffd65bd8d23a7010145 216 Gene3D G3DSA:2.40.30.20 1 89 3.1E-27 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_26835 8efbc02cb5982ffd65bd8d23a7010145 216 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 1.9E-66 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JV59_26835 8efbc02cb5982ffd65bd8d23a7010145 216 PIRSF PIRSF000498 1 210 3.2E-79 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JV59_26835 8efbc02cb5982ffd65bd8d23a7010145 216 SUPERFAMILY SSF63380 1 89 1.19E-24 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JV59_25040 63c3cc1b9dbc1a64451f14df6f275b34 461 SUPERFAMILY SSF53633 9 312 1.8E-34 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JV59_25040 63c3cc1b9dbc1a64451f14df6f275b34 461 Gene3D G3DSA:3.40.1160.10 8 313 1.3E-38 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JV59_25040 63c3cc1b9dbc1a64451f14df6f275b34 461 Pfam PF00696 Amino acid kinase family 10 297 2.8E-17 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 JV59_29590 f78a08dbdf7fa1dc7d4d1aa0de8667ef 482 Pfam PF00083 Sugar (and other) transporter 21 462 4.9E-105 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 JV59_29590 f78a08dbdf7fa1dc7d4d1aa0de8667ef 482 ProSitePatterns PS00217 Sugar transport proteins signature 2. 116 141 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JV59_29590 f78a08dbdf7fa1dc7d4d1aa0de8667ef 482 Gene3D G3DSA:1.20.1250.20 10 463 6.0E-128 T 14-10-2018 JV59_29590 f78a08dbdf7fa1dc7d4d1aa0de8667ef 482 PRINTS PR00171 Sugar transporter signature 111 130 8.1E-24 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 JV59_29590 f78a08dbdf7fa1dc7d4d1aa0de8667ef 482 PRINTS PR00171 Sugar transporter signature 381 393 8.1E-24 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 JV59_29590 f78a08dbdf7fa1dc7d4d1aa0de8667ef 482 PRINTS PR00171 Sugar transporter signature 358 379 8.1E-24 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 JV59_29590 f78a08dbdf7fa1dc7d4d1aa0de8667ef 482 PRINTS PR00171 Sugar transporter signature 28 38 8.1E-24 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 JV59_29590 f78a08dbdf7fa1dc7d4d1aa0de8667ef 482 PRINTS PR00171 Sugar transporter signature 273 283 8.1E-24 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 JV59_29590 f78a08dbdf7fa1dc7d4d1aa0de8667ef 482 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 9 458 2.6E-110 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 JV59_29590 f78a08dbdf7fa1dc7d4d1aa0de8667ef 482 SUPERFAMILY SSF103473 8 461 9.29E-73 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_34510 13f33f99e5ab49db81d66377e50deb3a 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 132.381 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 JV59_34510 13f33f99e5ab49db81d66377e50deb3a 341 SUPERFAMILY SSF53659 4 336 6.58E-97 T 14-10-2018 JV59_34510 13f33f99e5ab49db81d66377e50deb3a 341 Gene3D G3DSA:3.40.718.10 3 340 4.4E-115 T 14-10-2018 JV59_34510 13f33f99e5ab49db81d66377e50deb3a 341 PIRSF PIRSF002465 2 339 3.5E-121 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 JV59_34510 13f33f99e5ab49db81d66377e50deb3a 341 Pfam PF02504 Fatty acid synthesis protein 5 327 7.0E-98 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 JV59_34510 13f33f99e5ab49db81d66377e50deb3a 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 4.7E-102 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 JV59_29625 343f4b368506bc8aac70637368380536 277 Gene3D G3DSA:3.20.20.150 4 276 7.6E-55 T 14-10-2018 JV59_29625 343f4b368506bc8aac70637368380536 277 Pfam PF01261 Xylose isomerase-like TIM barrel 20 211 1.1E-22 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain JV59_29625 343f4b368506bc8aac70637368380536 277 SUPERFAMILY SSF51658 1 274 2.76E-55 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily JV59_38915 9d038eb2e1e0866753047a8d47985158 128 SUPERFAMILY SSF55174 7 104 2.75E-31 T 14-10-2018 JV59_38915 9d038eb2e1e0866753047a8d47985158 128 PIRSF PIRSF016821 5 128 2.0E-41 T 14-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 JV59_38915 9d038eb2e1e0866753047a8d47985158 128 SMART SM00363 8 71 1.5E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_38915 9d038eb2e1e0866753047a8d47985158 128 Gene3D G3DSA:3.10.290.10 2 107 2.5E-37 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 JV59_38915 9d038eb2e1e0866753047a8d47985158 128 Pfam PF01479 S4 domain 8 54 2.9E-12 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_20185 08b39c4bd90b3bf2368325b48939af08 605 SUPERFAMILY SSF50800 6 264 4.34E-13 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily JV59_20185 08b39c4bd90b3bf2368325b48939af08 605 SUPERFAMILY SSF54292 501 604 3.28E-25 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JV59_20185 08b39c4bd90b3bf2368325b48939af08 605 Pfam PF03476 MOSC N-terminal beta barrel domain 5 118 5.8E-29 T 14-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 JV59_20185 08b39c4bd90b3bf2368325b48939af08 605 SUPERFAMILY SSF63380 279 379 1.55E-26 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JV59_20185 08b39c4bd90b3bf2368325b48939af08 605 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 533 597 2.3E-12 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JV59_20185 08b39c4bd90b3bf2368325b48939af08 605 Gene3D G3DSA:3.10.20.30 508 605 6.0E-21 T 14-10-2018 IPR012675 Beta-grasp domain superfamily JV59_20185 08b39c4bd90b3bf2368325b48939af08 605 SUPERFAMILY SSF141673 6 133 4.32E-28 T 14-10-2018 JV59_20185 08b39c4bd90b3bf2368325b48939af08 605 Gene3D G3DSA:3.40.50.80 381 507 1.3E-31 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JV59_20185 08b39c4bd90b3bf2368325b48939af08 605 Pfam PF03473 MOSC domain 139 262 3.6E-29 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 JV59_20185 08b39c4bd90b3bf2368325b48939af08 605 PRINTS PR00406 Cytochrome B5 reductase signature 365 379 1.4E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 JV59_20185 08b39c4bd90b3bf2368325b48939af08 605 PRINTS PR00406 Cytochrome B5 reductase signature 478 486 1.4E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 JV59_20185 08b39c4bd90b3bf2368325b48939af08 605 PRINTS PR00406 Cytochrome B5 reductase signature 328 335 1.4E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 JV59_20185 08b39c4bd90b3bf2368325b48939af08 605 PRINTS PR00406 Cytochrome B5 reductase signature 425 436 1.4E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 JV59_20185 08b39c4bd90b3bf2368325b48939af08 605 PRINTS PR00406 Cytochrome B5 reductase signature 388 407 1.4E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 JV59_20185 08b39c4bd90b3bf2368325b48939af08 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 309 319 1.8E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JV59_20185 08b39c4bd90b3bf2368325b48939af08 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 478 486 1.8E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JV59_20185 08b39c4bd90b3bf2368325b48939af08 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 425 436 1.8E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JV59_20185 08b39c4bd90b3bf2368325b48939af08 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 328 335 1.8E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JV59_20185 08b39c4bd90b3bf2368325b48939af08 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 388 407 1.8E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JV59_20185 08b39c4bd90b3bf2368325b48939af08 605 Pfam PF00970 Oxidoreductase FAD-binding domain 284 378 7.4E-17 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 JV59_20185 08b39c4bd90b3bf2368325b48939af08 605 Gene3D G3DSA:2.40.30.10 279 378 1.2E-24 T 14-10-2018 JV59_20185 08b39c4bd90b3bf2368325b48939af08 605 SUPERFAMILY SSF52343 368 508 1.17E-36 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JV59_20185 08b39c4bd90b3bf2368325b48939af08 605 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 555 563 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 JV59_20185 08b39c4bd90b3bf2368325b48939af08 605 Pfam PF00175 Oxidoreductase NAD-binding domain 389 492 4.7E-19 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 JV59_26980 5bcab61a4d5f1b359e23e3679e09e79e 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 8.3E-15 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26980 5bcab61a4d5f1b359e23e3679e09e79e 86 PRINTS PR01249 Ribosomal protein L31 signature 45 60 8.3E-15 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26980 5bcab61a4d5f1b359e23e3679e09e79e 86 PRINTS PR01249 Ribosomal protein L31 signature 60 78 8.3E-15 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26980 5bcab61a4d5f1b359e23e3679e09e79e 86 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26980 5bcab61a4d5f1b359e23e3679e09e79e 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 2.0E-18 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26980 5bcab61a4d5f1b359e23e3679e09e79e 86 SUPERFAMILY SSF143800 1 81 3.02E-22 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26980 5bcab61a4d5f1b359e23e3679e09e79e 86 Pfam PF01197 Ribosomal protein L31 1 79 2.4E-26 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26980 5bcab61a4d5f1b359e23e3679e09e79e 86 Gene3D G3DSA:2.30.170.50 1 84 9.7E-24 T 14-10-2018 JV59_26980 5bcab61a4d5f1b359e23e3679e09e79e 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 29.166 T 14-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_16105 d6e7699921377488f0da2b00b5ccb52d 153 SUPERFAMILY SSF46785 9 146 6.68E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_16105 d6e7699921377488f0da2b00b5ccb52d 153 Gene3D G3DSA:1.10.10.10 1 88 8.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_16105 d6e7699921377488f0da2b00b5ccb52d 153 Pfam PF01475 Ferric uptake regulator family 18 141 2.5E-11 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 JV59_16105 d6e7699921377488f0da2b00b5ccb52d 153 Gene3D G3DSA:3.30.1490.190 90 152 1.7E-12 T 14-10-2018 JV59_36430 600abe6642917f31e6aa7c59832b5d94 617 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 616 3.0E-267 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 JV59_36430 600abe6642917f31e6aa7c59832b5d94 617 Gene3D G3DSA:3.90.640.10 238 311 2.0E-111 T 14-10-2018 JV59_36430 600abe6642917f31e6aa7c59832b5d94 617 SUPERFAMILY SSF53067 19 196 1.13E-50 T 14-10-2018 JV59_36430 600abe6642917f31e6aa7c59832b5d94 617 Gene3D G3DSA:2.60.34.10 379 519 2.0E-49 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 JV59_36430 600abe6642917f31e6aa7c59832b5d94 617 SUPERFAMILY SSF100920 384 537 6.15E-51 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 JV59_36430 600abe6642917f31e6aa7c59832b5d94 617 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.7E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_36430 600abe6642917f31e6aa7c59832b5d94 617 PRINTS PR00301 70kDa heat shock protein signature 360 380 1.7E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_36430 600abe6642917f31e6aa7c59832b5d94 617 PRINTS PR00301 70kDa heat shock protein signature 152 172 1.7E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_36430 600abe6642917f31e6aa7c59832b5d94 617 PRINTS PR00301 70kDa heat shock protein signature 329 345 1.7E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_36430 600abe6642917f31e6aa7c59832b5d94 617 PRINTS PR00301 70kDa heat shock protein signature 466 482 1.7E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_36430 600abe6642917f31e6aa7c59832b5d94 617 PRINTS PR00301 70kDa heat shock protein signature 48 60 1.7E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_36430 600abe6642917f31e6aa7c59832b5d94 617 PRINTS PR00301 70kDa heat shock protein signature 211 221 1.7E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_36430 600abe6642917f31e6aa7c59832b5d94 617 PRINTS PR00301 70kDa heat shock protein signature 385 404 1.7E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_36430 600abe6642917f31e6aa7c59832b5d94 617 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 JV59_36430 600abe6642917f31e6aa7c59832b5d94 617 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 45.982 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 JV59_36430 600abe6642917f31e6aa7c59832b5d94 617 Gene3D G3DSA:3.30.420.40 194 361 2.0E-111 T 14-10-2018 JV59_36430 600abe6642917f31e6aa7c59832b5d94 617 Pfam PF00012 Hsp70 protein 22 601 3.1E-187 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_36430 600abe6642917f31e6aa7c59832b5d94 617 Gene3D G3DSA:3.30.420.40 23 374 2.0E-111 T 14-10-2018 JV59_36430 600abe6642917f31e6aa7c59832b5d94 617 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 JV59_36430 600abe6642917f31e6aa7c59832b5d94 617 SUPERFAMILY SSF100934 504 616 2.75E-33 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 JV59_36430 600abe6642917f31e6aa7c59832b5d94 617 SUPERFAMILY SSF53067 200 377 8.64E-49 T 14-10-2018 JV59_36430 600abe6642917f31e6aa7c59832b5d94 617 Gene3D G3DSA:1.20.1270.10 520 616 9.3E-25 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 JV59_22870 5eb5840e5cbf8e3487268114d0718f55 567 Pfam PF01979 Amidohydrolase family 125 453 1.2E-82 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JV59_22870 5eb5840e5cbf8e3487268114d0718f55 567 SUPERFAMILY SSF51556 129 567 3.05E-200 T 14-10-2018 IPR032466 Metal-dependent hydrolase JV59_22870 5eb5840e5cbf8e3487268114d0718f55 567 SUPERFAMILY SSF51338 423 477 1.47E-6 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JV59_22870 5eb5840e5cbf8e3487268114d0718f55 567 SUPERFAMILY SSF51338 2 178 3.12E-63 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JV59_22870 5eb5840e5cbf8e3487268114d0718f55 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 295 312 5.6E-35 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JV59_22870 5eb5840e5cbf8e3487268114d0718f55 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 401 416 5.6E-35 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JV59_22870 5eb5840e5cbf8e3487268114d0718f55 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 334 350 5.6E-35 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JV59_22870 5eb5840e5cbf8e3487268114d0718f55 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 427 440 5.6E-35 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JV59_22870 5eb5840e5cbf8e3487268114d0718f55 567 Gene3D G3DSA:3.20.20.140 129 567 1.7E-302 T 14-10-2018 JV59_22870 5eb5840e5cbf8e3487268114d0718f55 567 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 567 2.0E-293 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JV59_22870 5eb5840e5cbf8e3487268114d0718f55 567 ProSitePatterns PS01120 Urease nickel ligands signature. 127 140 - T 14-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JV59_22870 5eb5840e5cbf8e3487268114d0718f55 567 Gene3D G3DSA:2.30.40.10 4 480 1.7E-302 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JV59_22870 5eb5840e5cbf8e3487268114d0718f55 567 ProSitePatterns PS00145 Urease active site. 317 333 - T 14-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JV59_22870 5eb5840e5cbf8e3487268114d0718f55 567 Hamap MF_01953 Urease subunit alpha [ureC]. 2 567 56.928 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JV59_22870 5eb5840e5cbf8e3487268114d0718f55 567 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 118 3.5E-56 T 14-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JV59_18475 778c06265dde35d4dd181f32b4d4c0e9 312 Gene3D G3DSA:3.40.50.1220 187 312 1.5E-57 T 14-10-2018 JV59_18475 778c06265dde35d4dd181f32b4d4c0e9 312 PIRSF PIRSF000089 1 312 8.9E-110 T 14-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 JV59_18475 778c06265dde35d4dd181f32b4d4c0e9 312 SMART SM00893 5 185 1.3E-44 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 JV59_18475 778c06265dde35d4dd181f32b4d4c0e9 312 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 256 282 - T 14-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 JV59_18475 778c06265dde35d4dd181f32b4d4c0e9 312 Pfam PF01012 Electron transfer flavoprotein domain 6 171 3.0E-37 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 JV59_18475 778c06265dde35d4dd181f32b4d4c0e9 312 SUPERFAMILY SSF52402 5 187 5.09E-50 T 14-10-2018 JV59_18475 778c06265dde35d4dd181f32b4d4c0e9 312 SUPERFAMILY SSF52467 192 311 4.91E-49 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JV59_18475 778c06265dde35d4dd181f32b4d4c0e9 312 Gene3D G3DSA:3.40.50.620 5 186 2.6E-50 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_18475 778c06265dde35d4dd181f32b4d4c0e9 312 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 193 275 2.4E-36 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 JV59_16335 7a7d0e90b711a8f2a7302ed0a2998e88 299 Pfam PF00892 EamA-like transporter family 11 141 5.0E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_16335 7a7d0e90b711a8f2a7302ed0a2998e88 299 Pfam PF00892 EamA-like transporter family 156 286 2.7E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_16335 7a7d0e90b711a8f2a7302ed0a2998e88 299 SUPERFAMILY SSF103481 193 290 1.83E-13 T 14-10-2018 JV59_16335 7a7d0e90b711a8f2a7302ed0a2998e88 299 SUPERFAMILY SSF103481 46 145 2.88E-17 T 14-10-2018 JV59_29975 f3d01fc7d735188639482e4ab55b3f92 168 SUPERFAMILY SSF56420 2 164 2.62E-54 T 14-10-2018 IPR036821 Peptide deformylase superfamily JV59_29975 f3d01fc7d735188639482e4ab55b3f92 168 Hamap MF_00163 Peptide deformylase [def]. 2 162 29.029 T 14-10-2018 IPR023635 Peptide deformylase JV59_29975 f3d01fc7d735188639482e4ab55b3f92 168 Pfam PF01327 Polypeptide deformylase 4 152 2.6E-46 T 14-10-2018 IPR023635 Peptide deformylase JV59_29975 f3d01fc7d735188639482e4ab55b3f92 168 PIRSF PIRSF004749 1 168 8.3E-50 T 14-10-2018 IPR023635 Peptide deformylase JV59_29975 f3d01fc7d735188639482e4ab55b3f92 168 PRINTS PR01576 Peptide deformylase signature 33 62 5.7E-30 T 14-10-2018 IPR023635 Peptide deformylase JV59_29975 f3d01fc7d735188639482e4ab55b3f92 168 PRINTS PR01576 Peptide deformylase signature 101 119 5.7E-30 T 14-10-2018 IPR023635 Peptide deformylase JV59_29975 f3d01fc7d735188639482e4ab55b3f92 168 PRINTS PR01576 Peptide deformylase signature 89 100 5.7E-30 T 14-10-2018 IPR023635 Peptide deformylase JV59_29975 f3d01fc7d735188639482e4ab55b3f92 168 PRINTS PR01576 Peptide deformylase signature 120 149 5.7E-30 T 14-10-2018 IPR023635 Peptide deformylase JV59_29975 f3d01fc7d735188639482e4ab55b3f92 168 Gene3D G3DSA:3.90.45.10 1 168 5.8E-62 T 14-10-2018 IPR036821 Peptide deformylase superfamily JV59_29975 f3d01fc7d735188639482e4ab55b3f92 168 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 2.0E-48 T 14-10-2018 IPR023635 Peptide deformylase JV59_23165 4f7c6d7455d0e2e118bec6151b35d2df 701 Gene3D G3DSA:2.30.30.40 553 680 7.0E-36 T 14-10-2018 JV59_23165 4f7c6d7455d0e2e118bec6151b35d2df 701 SUPERFAMILY SSF47226 4 129 8.64E-31 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_23165 4f7c6d7455d0e2e118bec6151b35d2df 701 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 507 6.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_23165 4f7c6d7455d0e2e118bec6151b35d2df 701 PRINTS PR00344 Bacterial sensor protein C-terminal signature 537 550 6.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_23165 4f7c6d7455d0e2e118bec6151b35d2df 701 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 468 6.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_23165 4f7c6d7455d0e2e118bec6151b35d2df 701 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 531 6.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_23165 4f7c6d7455d0e2e118bec6151b35d2df 701 Pfam PF01627 Hpt domain 7 103 7.6E-18 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 JV59_23165 4f7c6d7455d0e2e118bec6151b35d2df 701 Pfam PF01584 CheW-like domain 560 685 6.5E-24 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JV59_23165 4f7c6d7455d0e2e118bec6151b35d2df 701 SUPERFAMILY SSF47384 302 365 8.63E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_23165 4f7c6d7455d0e2e118bec6151b35d2df 701 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 302 364 2.5E-15 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 JV59_23165 4f7c6d7455d0e2e118bec6151b35d2df 701 Gene3D G3DSA:3.30.565.10 365 552 2.5E-60 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_23165 4f7c6d7455d0e2e118bec6151b35d2df 701 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 412 552 3.4E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_23165 4f7c6d7455d0e2e118bec6151b35d2df 701 SMART SM00387 409 553 1.1E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_23165 4f7c6d7455d0e2e118bec6151b35d2df 701 SMART SM00260 545 684 8.0E-35 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JV59_23165 4f7c6d7455d0e2e118bec6151b35d2df 701 SMART SM01231 301 364 1.8E-18 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 JV59_23165 4f7c6d7455d0e2e118bec6151b35d2df 701 SMART SM00073 5 102 1.4E-23 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 JV59_23165 4f7c6d7455d0e2e118bec6151b35d2df 701 SUPERFAMILY SSF50341 552 684 2.75E-28 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 JV59_23165 4f7c6d7455d0e2e118bec6151b35d2df 701 SUPERFAMILY SSF55874 368 551 9.82E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_23165 4f7c6d7455d0e2e118bec6151b35d2df 701 Gene3D G3DSA:1.20.120.160 1 145 7.5E-37 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_23165 4f7c6d7455d0e2e118bec6151b35d2df 701 Gene3D G3DSA:2.40.50.180 576 639 7.0E-36 T 14-10-2018 JV59_23165 4f7c6d7455d0e2e118bec6151b35d2df 701 Gene3D G3DSA:1.10.287.560 301 364 1.9E-16 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 JV59_31390 a23d20ef419b2b738a39cc2e805e2324 536 Pfam PF04030 D-arabinono-1,4-lactone oxidase 203 488 1.4E-20 T 14-10-2018 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 JV59_31390 a23d20ef419b2b738a39cc2e805e2324 536 Gene3D G3DSA:3.30.70.2520 353 452 1.4E-6 T 14-10-2018 JV59_31390 a23d20ef419b2b738a39cc2e805e2324 536 SUPERFAMILY SSF56176 22 207 3.69E-32 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JV59_31390 a23d20ef419b2b738a39cc2e805e2324 536 Gene3D G3DSA:3.30.465.10 100 223 5.5E-31 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JV59_31390 a23d20ef419b2b738a39cc2e805e2324 536 PIRSF PIRSF000136 23 496 2.4E-47 T 14-10-2018 IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase GO:0016899|GO:0055114 JV59_31390 a23d20ef419b2b738a39cc2e805e2324 536 Pfam PF01565 FAD binding domain 43 182 2.0E-19 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 JV59_31390 a23d20ef419b2b738a39cc2e805e2324 536 Gene3D G3DSA:3.30.43.10 27 98 1.1E-7 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 JV59_18175 4986d2a72e5f70e3362e719a052cbdc0 629 SMART SM00100 17 134 0.0092 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JV59_18175 4986d2a72e5f70e3362e719a052cbdc0 629 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 442 3.9E-47 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 JV59_18175 4986d2a72e5f70e3362e719a052cbdc0 629 SMART SM00116 159 216 2.0 T 14-10-2018 IPR000644 CBS domain JV59_18175 4986d2a72e5f70e3362e719a052cbdc0 629 SMART SM00116 233 280 1.5E-6 T 14-10-2018 IPR000644 CBS domain JV59_18175 4986d2a72e5f70e3362e719a052cbdc0 629 Gene3D G3DSA:2.60.120.10 1 145 2.2E-23 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_18175 4986d2a72e5f70e3362e719a052cbdc0 629 Pfam PF00571 CBS domain 159 214 2.6E-5 T 14-10-2018 IPR000644 CBS domain JV59_18175 4986d2a72e5f70e3362e719a052cbdc0 629 Pfam PF00571 CBS domain 226 278 3.1E-11 T 14-10-2018 IPR000644 CBS domain JV59_18175 4986d2a72e5f70e3362e719a052cbdc0 629 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 479 622 1.7E-47 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding JV59_18175 4986d2a72e5f70e3362e719a052cbdc0 629 SUPERFAMILY SSF51206 7 129 3.8E-26 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JV59_18175 4986d2a72e5f70e3362e719a052cbdc0 629 Gene3D G3DSA:3.10.580.10 146 282 8.2E-32 T 14-10-2018 JV59_18175 4986d2a72e5f70e3362e719a052cbdc0 629 Pfam PF00027 Cyclic nucleotide-binding domain 37 119 2.1E-13 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JV59_18175 4986d2a72e5f70e3362e719a052cbdc0 629 SUPERFAMILY SSF54631 151 278 2.02E-26 T 14-10-2018 JV59_37360 1610c6793c5012c2fb9c654471584825 153 Gene3D G3DSA:2.30.30.20 101 153 7.2E-24 T 14-10-2018 JV59_37360 1610c6793c5012c2fb9c654471584825 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 9.3E-31 T 14-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal JV59_37360 1610c6793c5012c2fb9c654471584825 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 1.0E-42 T 14-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal JV59_37360 1610c6793c5012c2fb9c654471584825 153 SUPERFAMILY SSF54893 2 100 1.19E-35 T 14-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily JV59_37360 1610c6793c5012c2fb9c654471584825 153 Gene3D G3DSA:3.30.70.140 1 100 1.1E-36 T 14-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily JV59_37360 1610c6793c5012c2fb9c654471584825 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 1.8E-61 T 14-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 JV59_37360 1610c6793c5012c2fb9c654471584825 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.832 T 14-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 JV59_37360 1610c6793c5012c2fb9c654471584825 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 150 2.3E-19 T 14-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal JV59_37360 1610c6793c5012c2fb9c654471584825 153 SUPERFAMILY SSF57825 101 151 4.84E-16 T 14-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily JV59_29145 cbb34e7e0ba05fc56d106e8b0b16778c 837 Gene3D G3DSA:1.10.287.130 422 521 2.7E-5 T 14-10-2018 JV59_29145 cbb34e7e0ba05fc56d106e8b0b16778c 837 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 9.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_29145 cbb34e7e0ba05fc56d106e8b0b16778c 837 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 9.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_29145 cbb34e7e0ba05fc56d106e8b0b16778c 837 PRINTS PR00344 Bacterial sensor protein C-terminal signature 639 657 9.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_29145 cbb34e7e0ba05fc56d106e8b0b16778c 837 PRINTS PR00344 Bacterial sensor protein C-terminal signature 663 676 9.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_29145 cbb34e7e0ba05fc56d106e8b0b16778c 837 SMART SM00387 570 679 1.4E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_29145 cbb34e7e0ba05fc56d106e8b0b16778c 837 Gene3D G3DSA:3.30.565.10 532 690 9.6E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_29145 cbb34e7e0ba05fc56d106e8b0b16778c 837 Gene3D G3DSA:3.40.50.2300 707 835 2.4E-32 T 14-10-2018 JV59_29145 cbb34e7e0ba05fc56d106e8b0b16778c 837 SMART SM00448 718 828 2.0E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_29145 cbb34e7e0ba05fc56d106e8b0b16778c 837 SUPERFAMILY SSF55874 529 680 2.23E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_29145 cbb34e7e0ba05fc56d106e8b0b16778c 837 SUPERFAMILY SSF47384 450 504 1.51E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_29145 cbb34e7e0ba05fc56d106e8b0b16778c 837 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 578 678 1.1E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_29145 cbb34e7e0ba05fc56d106e8b0b16778c 837 SUPERFAMILY SSF52172 716 832 3.98E-30 T 14-10-2018 IPR011006 CheY-like superfamily JV59_29145 cbb34e7e0ba05fc56d106e8b0b16778c 837 Pfam PF00072 Response regulator receiver domain 720 827 8.6E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_35600 468d031f12050399853ecc757f78ecb9 528 SUPERFAMILY SSF51735 387 518 1.84E-12 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_35600 468d031f12050399853ecc757f78ecb9 528 Pfam PF02254 TrkA-N domain 388 504 2.5E-17 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 JV59_35600 468d031f12050399853ecc757f78ecb9 528 Pfam PF00999 Sodium/hydrogen exchanger family 4 347 3.0E-33 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 JV59_35600 468d031f12050399853ecc757f78ecb9 528 Gene3D G3DSA:1.20.1530.20 2 361 1.8E-44 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily JV59_35600 468d031f12050399853ecc757f78ecb9 528 Gene3D G3DSA:3.40.50.720 379 527 2.2E-30 T 14-10-2018 JV59_27390 b44c58ba7eee666d0fe499e188983988 259 Pfam PF02107 Flagellar L-ring protein 81 257 3.7E-58 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 JV59_27390 b44c58ba7eee666d0fe499e188983988 259 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 259 28.344 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 JV59_27390 b44c58ba7eee666d0fe499e188983988 259 PRINTS PR01008 Flagellar L-ring protein signature 103 115 3.4E-22 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 JV59_27390 b44c58ba7eee666d0fe499e188983988 259 PRINTS PR01008 Flagellar L-ring protein signature 238 252 3.4E-22 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 JV59_27390 b44c58ba7eee666d0fe499e188983988 259 PRINTS PR01008 Flagellar L-ring protein signature 222 236 3.4E-22 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 JV59_27390 b44c58ba7eee666d0fe499e188983988 259 PRINTS PR01008 Flagellar L-ring protein signature 201 217 3.4E-22 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 JV59_27390 b44c58ba7eee666d0fe499e188983988 259 PRINTS PR01008 Flagellar L-ring protein signature 175 190 3.4E-22 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 JV59_17310 fe0b495b64ff2eab0042bec0822060c6 644 SUPERFAMILY SSF55874 474 635 3.27E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_17310 fe0b495b64ff2eab0042bec0822060c6 644 SMART SM00387 526 638 2.6E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_17310 fe0b495b64ff2eab0042bec0822060c6 644 Gene3D G3DSA:3.30.565.10 486 639 2.6E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_17310 fe0b495b64ff2eab0042bec0822060c6 644 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 46 152 2.3E-29 T 14-10-2018 IPR033414 Periplasmic sensor domain JV59_17310 fe0b495b64ff2eab0042bec0822060c6 644 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 531 636 1.2E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_17310 fe0b495b64ff2eab0042bec0822060c6 644 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 580 7.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_17310 fe0b495b64ff2eab0042bec0822060c6 644 PRINTS PR00344 Bacterial sensor protein C-terminal signature 584 594 7.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_17310 fe0b495b64ff2eab0042bec0822060c6 644 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 615 7.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_17310 fe0b495b64ff2eab0042bec0822060c6 644 PRINTS PR00344 Bacterial sensor protein C-terminal signature 622 635 7.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_17310 fe0b495b64ff2eab0042bec0822060c6 644 Gene3D G3DSA:1.10.287.130 377 478 5.4E-19 T 14-10-2018 JV59_23560 f4e63ddfc419831b662896d9c1b7d836 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.2E-5 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_23560 f4e63ddfc419831b662896d9c1b7d836 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 1.2E-5 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_23560 f4e63ddfc419831b662896d9c1b7d836 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 1.2E-5 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_23560 f4e63ddfc419831b662896d9c1b7d836 97 SUPERFAMILY SSF46785 2 93 7.87E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_23560 f4e63ddfc419831b662896d9c1b7d836 97 Gene3D G3DSA:1.10.10.10 1 97 2.9E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_23560 f4e63ddfc419831b662896d9c1b7d836 97 Pfam PF12840 Helix-turn-helix domain 8 69 1.1E-10 T 14-10-2018 JV59_23560 f4e63ddfc419831b662896d9c1b7d836 97 SMART SM00418 8 89 7.1E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_25060 80ad7378de6a742b79c7832a9c892aba 556 SUPERFAMILY SSF53850 124 323 2.17E-38 T 14-10-2018 JV59_25060 80ad7378de6a742b79c7832a9c892aba 556 Gene3D G3DSA:3.40.190.10 114 367 2.6E-33 T 14-10-2018 JV59_25060 80ad7378de6a742b79c7832a9c892aba 556 Pfam PF12793 Sugar transport-related sRNA regulator N-term 12 115 9.9E-20 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain JV59_25060 80ad7378de6a742b79c7832a9c892aba 556 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 170 322 4.4E-23 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain JV59_18910 a80f28910e9dabba587053ff8589fe02 479 SUPERFAMILY SSF55604 27 96 5.62E-21 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 JV59_18910 a80f28910e9dabba587053ff8589fe02 479 Pfam PF02378 Phosphotransferase system, EIIC 128 417 4.7E-27 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 JV59_18910 a80f28910e9dabba587053ff8589fe02 479 Gene3D G3DSA:3.30.1360.60 19 96 1.1E-22 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 JV59_18910 a80f28910e9dabba587053ff8589fe02 479 Pfam PF00367 phosphotransferase system, EIIB 30 60 7.7E-13 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 JV59_18910 a80f28910e9dabba587053ff8589fe02 479 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 39 56 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 JV59_23695 779682f0de3431b5e79f897b1d2da385 160 Gene3D G3DSA:1.10.10.10 75 158 8.4E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_23695 779682f0de3431b5e79f897b1d2da385 160 SUPERFAMILY SSF53155 4 81 2.55E-20 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 JV59_23695 779682f0de3431b5e79f897b1d2da385 160 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 7 156 43.806 T 14-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 JV59_23695 779682f0de3431b5e79f897b1d2da385 160 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 76 155 1.0E-37 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 JV59_23695 779682f0de3431b5e79f897b1d2da385 160 Gene3D G3DSA:3.30.160.70 3 71 1.6E-19 T 14-10-2018 JV59_23695 779682f0de3431b5e79f897b1d2da385 160 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 78 156 9.4E-33 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 JV59_23695 779682f0de3431b5e79f897b1d2da385 160 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 5 72 2.5E-7 T 14-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 JV59_23695 779682f0de3431b5e79f897b1d2da385 160 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 126 132 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 JV59_23695 779682f0de3431b5e79f897b1d2da385 160 SUPERFAMILY SSF46767 75 156 1.44E-32 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 JV59_18750 992203cc029d6b05473d299e5c9d3509 275 SMART SM00450 5 128 6.5E-18 T 14-10-2018 IPR001763 Rhodanese-like domain JV59_18750 992203cc029d6b05473d299e5c9d3509 275 SMART SM00450 152 272 7.6E-11 T 14-10-2018 IPR001763 Rhodanese-like domain JV59_18750 992203cc029d6b05473d299e5c9d3509 275 Gene3D G3DSA:3.40.250.10 155 275 1.6E-36 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JV59_18750 992203cc029d6b05473d299e5c9d3509 275 SUPERFAMILY SSF52821 155 274 3.4E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JV59_18750 992203cc029d6b05473d299e5c9d3509 275 SUPERFAMILY SSF52821 2 133 1.57E-31 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JV59_18750 992203cc029d6b05473d299e5c9d3509 275 Gene3D G3DSA:3.40.250.10 2 143 5.5E-38 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JV59_18750 992203cc029d6b05473d299e5c9d3509 275 Pfam PF00581 Rhodanese-like domain 6 124 2.5E-12 T 14-10-2018 IPR001763 Rhodanese-like domain JV59_18750 992203cc029d6b05473d299e5c9d3509 275 Pfam PF00581 Rhodanese-like domain 157 268 1.5E-10 T 14-10-2018 IPR001763 Rhodanese-like domain JV59_38965 b62952518ba713160420969405418bac 348 SMART SM00388 129 194 1.5E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_38965 b62952518ba713160420969405418bac 348 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 9 120 7.3E-6 T 14-10-2018 IPR000014 PAS domain JV59_38965 b62952518ba713160420969405418bac 348 Gene3D G3DSA:3.30.565.10 191 348 4.5E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_38965 b62952518ba713160420969405418bac 348 Gene3D G3DSA:3.30.450.20 2 112 2.3E-25 T 14-10-2018 JV59_38965 b62952518ba713160420969405418bac 348 Gene3D G3DSA:1.10.287.130 133 190 4.8E-14 T 14-10-2018 JV59_38965 b62952518ba713160420969405418bac 348 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 189 1.2E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_38965 b62952518ba713160420969405418bac 348 Pfam PF00989 PAS fold 9 111 6.3E-14 T 14-10-2018 IPR013767 PAS fold GO:0006355 JV59_38965 b62952518ba713160420969405418bac 348 SUPERFAMILY SSF55874 198 347 1.03E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_38965 b62952518ba713160420969405418bac 348 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 6.0E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_38965 b62952518ba713160420969405418bac 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 347 9.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_38965 b62952518ba713160420969405418bac 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 9.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_38965 b62952518ba713160420969405418bac 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 9.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_38965 b62952518ba713160420969405418bac 348 SUPERFAMILY SSF55785 17 121 1.92E-8 T 14-10-2018 IPR035965 PAS domain superfamily JV59_38965 b62952518ba713160420969405418bac 348 SUPERFAMILY SSF47384 125 190 1.02E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_38965 b62952518ba713160420969405418bac 348 SMART SM00387 233 348 9.8E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_38965 b62952518ba713160420969405418bac 348 SMART SM00091 4 72 1.6E-4 T 14-10-2018 IPR000014 PAS domain JV59_39985 c685fb7f64e5723910040541e434c436 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site JV59_39985 c685fb7f64e5723910040541e434c436 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 282 3.4E-71 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 JV59_39985 c685fb7f64e5723910040541e434c436 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 370 2.1E-25 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 JV59_39985 c685fb7f64e5723910040541e434c436 417 SUPERFAMILY SSF51419 27 284 8.58E-81 T 14-10-2018 IPR029066 PLP-binding barrel JV59_39985 c685fb7f64e5723910040541e434c436 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 41.409 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JV59_39985 c685fb7f64e5723910040541e434c436 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 3.4E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JV59_39985 c685fb7f64e5723910040541e434c436 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 3.4E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JV59_39985 c685fb7f64e5723910040541e434c436 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 3.4E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JV59_39985 c685fb7f64e5723910040541e434c436 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 3.4E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JV59_39985 c685fb7f64e5723910040541e434c436 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 1.8E-166 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JV59_39985 c685fb7f64e5723910040541e434c436 417 Gene3D G3DSA:2.40.37.10 17 404 3.9E-151 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 JV59_39985 c685fb7f64e5723910040541e434c436 417 SUPERFAMILY SSF50621 261 414 9.63E-53 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 JV59_39985 c685fb7f64e5723910040541e434c436 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 1.3E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 JV59_39985 c685fb7f64e5723910040541e434c436 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 1.3E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 JV59_39985 c685fb7f64e5723910040541e434c436 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 1.3E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 JV59_39985 c685fb7f64e5723910040541e434c436 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 1.3E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 JV59_39985 c685fb7f64e5723910040541e434c436 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 1.3E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 JV59_39985 c685fb7f64e5723910040541e434c436 417 Gene3D G3DSA:3.20.20.10 35 277 3.9E-151 T 14-10-2018 IPR029066 PLP-binding barrel JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 Pfam PF00122 E1-E2 ATPase 262 442 6.4E-51 T 14-10-2018 JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 SUPERFAMILY SSF55008 70 134 2.09E-14 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 ProSitePatterns PS01047 Heavy-metal-associated domain. 76 105 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 464 470 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 Gene3D G3DSA:3.40.1110.10 473 592 2.3E-79 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 Pfam PF00403 Heavy-metal-associated domain 76 118 7.8E-10 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 658 677 1.3E-27 T 14-10-2018 JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 585 596 1.3E-27 T 14-10-2018 JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 607 617 1.3E-27 T 14-10-2018 JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 462 476 1.3E-27 T 14-10-2018 JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 311 325 1.3E-27 T 14-10-2018 JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 681 693 1.3E-27 T 14-10-2018 JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 SUPERFAMILY SSF81653 264 361 9.55E-23 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 SUPERFAMILY SSF56784 460 758 1.02E-49 T 14-10-2018 IPR036412 HAD-like superfamily JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 SUPERFAMILY SSF81660 473 595 2.42E-23 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 PRINTS PR00941 Cadmium-transporting ATPase signature 74 83 9.0E-8 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 PRINTS PR00941 Cadmium-transporting ATPase signature 246 266 9.0E-8 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 PRINTS PR00941 Cadmium-transporting ATPase signature 346 360 9.0E-8 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 PRINTS PR00941 Cadmium-transporting ATPase signature 85 106 9.0E-8 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 Gene3D G3DSA:3.30.70.100 70 137 4.0E-15 T 14-10-2018 JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 Gene3D G3DSA:2.70.150.20 261 366 2.3E-32 T 14-10-2018 JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 Pfam PF00702 haloacid dehalogenase-like hydrolase 458 670 1.5E-35 T 14-10-2018 JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 234 737 4.9E-82 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 211 760 8.0E-173 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 211 525 2.2E-96 T 14-10-2018 JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 SUPERFAMILY SSF81665 214 744 8.76E-21 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 JV59_27930 bcf7ca440ac425114a341447c2fec9b4 768 Gene3D G3DSA:3.40.50.1000 443 710 2.3E-79 T 14-10-2018 IPR023214 HAD superfamily JV59_32085 fa7710dd7b565673612f6ec5c4cb7df9 484 Pfam PF00005 ABC transporter 41 159 5.6E-9 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_32085 fa7710dd7b565673612f6ec5c4cb7df9 484 Pfam PF00005 ABC transporter 271 422 1.9E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_32085 fa7710dd7b565673612f6ec5c4cb7df9 484 SUPERFAMILY SSF52540 42 221 5.43E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_32085 fa7710dd7b565673612f6ec5c4cb7df9 484 Gene3D G3DSA:3.40.50.300 10 240 6.3E-23 T 14-10-2018 JV59_32085 fa7710dd7b565673612f6ec5c4cb7df9 484 SMART SM00382 279 480 3.6E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_32085 fa7710dd7b565673612f6ec5c4cb7df9 484 Gene3D G3DSA:3.40.50.300 241 473 2.2E-42 T 14-10-2018 JV59_32085 fa7710dd7b565673612f6ec5c4cb7df9 484 SUPERFAMILY SSF52540 243 456 5.58E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_21235 b4cbdf2ec9e6d5ffc3bab6989b513711 273 SMART SM00342 174 259 9.7E-12 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_21235 b4cbdf2ec9e6d5ffc3bab6989b513711 273 SUPERFAMILY SSF46689 165 207 3.25E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_21235 b4cbdf2ec9e6d5ffc3bab6989b513711 273 Gene3D G3DSA:1.10.10.60 159 264 4.1E-21 T 14-10-2018 JV59_21235 b4cbdf2ec9e6d5ffc3bab6989b513711 273 Pfam PF12833 Helix-turn-helix domain 180 260 1.3E-15 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_17430 b687ad9419cf56ebaf7aafe36b3800a4 523 SUPERFAMILY SSF161098 271 512 1.19E-58 T 14-10-2018 IPR035906 MetI-like superfamily JV59_17430 b687ad9419cf56ebaf7aafe36b3800a4 523 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 110 269 8.9E-57 T 14-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain JV59_17430 b687ad9419cf56ebaf7aafe36b3800a4 523 Gene3D G3DSA:1.10.3720.10 279 522 1.1E-69 T 14-10-2018 IPR035906 MetI-like superfamily JV59_17430 b687ad9419cf56ebaf7aafe36b3800a4 523 Gene3D G3DSA:2.40.430.10 128 213 2.0E-49 T 14-10-2018 JV59_17430 b687ad9419cf56ebaf7aafe36b3800a4 523 Gene3D G3DSA:3.10.650.10 108 277 2.0E-49 T 14-10-2018 JV59_17430 b687ad9419cf56ebaf7aafe36b3800a4 523 SUPERFAMILY SSF160964 24 269 1.83E-81 T 14-10-2018 JV59_17430 b687ad9419cf56ebaf7aafe36b3800a4 523 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 305 511 9.2E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_17430 b687ad9419cf56ebaf7aafe36b3800a4 523 Gene3D G3DSA:1.20.58.370 16 105 1.5E-33 T 14-10-2018 IPR035277 MalF, N-terminal JV59_39510 bdf78aa5cf0babb6159758a7f4e999f4 154 SUPERFAMILY SSF54909 69 154 4.02E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_39510 bdf78aa5cf0babb6159758a7f4e999f4 154 Gene3D G3DSA:1.10.10.10 4 59 6.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_39510 bdf78aa5cf0babb6159758a7f4e999f4 154 SUPERFAMILY SSF46785 7 68 1.9E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_39510 bdf78aa5cf0babb6159758a7f4e999f4 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 3.2E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_39510 bdf78aa5cf0babb6159758a7f4e999f4 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 3.2E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_39510 bdf78aa5cf0babb6159758a7f4e999f4 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 3.2E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_39510 bdf78aa5cf0babb6159758a7f4e999f4 154 SMART SM00344 8 115 3.1E-38 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 JV59_39510 bdf78aa5cf0babb6159758a7f4e999f4 154 Gene3D G3DSA:3.30.70.920 60 142 3.9E-31 T 14-10-2018 JV59_39510 bdf78aa5cf0babb6159758a7f4e999f4 154 Pfam PF01037 Lrp/AsnC ligand binding domain 75 145 1.1E-16 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JV59_39510 bdf78aa5cf0babb6159758a7f4e999f4 154 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 5.0E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_17080 6f3dc568c7230e55bdc1800ad80e0dc9 388 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 188 359 5.9E-44 T 14-10-2018 IPR000160 GGDEF domain JV59_17080 6f3dc568c7230e55bdc1800ad80e0dc9 388 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 356 2.6E-42 T 14-10-2018 IPR000160 GGDEF domain JV59_17080 6f3dc568c7230e55bdc1800ad80e0dc9 388 SUPERFAMILY SSF55073 196 362 1.73E-45 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_17080 6f3dc568c7230e55bdc1800ad80e0dc9 388 SMART SM00267 180 360 1.3E-52 T 14-10-2018 IPR000160 GGDEF domain JV59_17080 6f3dc568c7230e55bdc1800ad80e0dc9 388 Gene3D G3DSA:3.30.70.270 185 366 5.8E-52 T 14-10-2018 JV59_00290 13dbb648780009cbbe10514afb0de507 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 49.224 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JV59_00290 13dbb648780009cbbe10514afb0de507 510 SUPERFAMILY SSF53649 4 509 4.32E-74 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 JV59_00290 13dbb648780009cbbe10514afb0de507 510 PIRSF PIRSF001492 1 510 8.9E-201 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JV59_00290 13dbb648780009cbbe10514afb0de507 510 SUPERFAMILY SSF64158 78 308 3.66E-81 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JV59_00290 13dbb648780009cbbe10514afb0de507 510 Pfam PF01676 Metalloenzyme superfamily 5 498 2.8E-79 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 JV59_00290 13dbb648780009cbbe10514afb0de507 510 Gene3D G3DSA:3.40.1450.10 78 310 1.9E-208 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JV59_00290 13dbb648780009cbbe10514afb0de507 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 2.4E-80 T 14-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JV59_00290 13dbb648780009cbbe10514afb0de507 510 Gene3D G3DSA:3.40.720.10 6 509 1.9E-208 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 JV59_00290 13dbb648780009cbbe10514afb0de507 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 508 4.8E-227 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JV59_28830 817ad740199749798415aa074a680fab 381 SUPERFAMILY SSF53383 5 373 2.24E-84 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_28830 817ad740199749798415aa074a680fab 381 Gene3D G3DSA:3.90.1150.10 43 370 1.8E-110 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_28830 817ad740199749798415aa074a680fab 381 Gene3D G3DSA:3.40.640.10 58 280 1.8E-110 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_28830 817ad740199749798415aa074a680fab 381 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 229 238 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 JV59_28830 817ad740199749798415aa074a680fab 381 Pfam PF00155 Aminotransferase class I and II 43 373 3.3E-41 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JV59_35945 60a22a401d6054c04edd477cd58f6ded 331 Gene3D G3DSA:1.10.260.40 6 116 1.8E-23 T 14-10-2018 JV59_35945 60a22a401d6054c04edd477cd58f6ded 331 SUPERFAMILY SSF47413 15 84 7.78E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_35945 60a22a401d6054c04edd477cd58f6ded 331 Pfam PF13464 Domain of unknown function (DUF4115) 257 330 2.3E-24 T 14-10-2018 IPR025194 Domain of unknown function DUF4115 JV59_35945 60a22a401d6054c04edd477cd58f6ded 331 SMART SM00530 20 81 0.003 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_35945 60a22a401d6054c04edd477cd58f6ded 331 Pfam PF13413 Helix-turn-helix domain 21 78 8.1E-18 T 14-10-2018 JV59_26130 5272bd71901084ce0fca94d5bf3e0cbf 160 PIRSF PIRSF002560 1 157 2.4E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 JV59_26130 5272bd71901084ce0fca94d5bf3e0cbf 160 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 1.8E-81 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 JV59_26130 5272bd71901084ce0fca94d5bf3e0cbf 160 Gene3D G3DSA:1.20.1260.10 1 158 9.9E-72 T 14-10-2018 IPR012347 Ferritin-like JV59_26130 5272bd71901084ce0fca94d5bf3e0cbf 160 SUPERFAMILY SSF47240 1 153 8.13E-56 T 14-10-2018 IPR009078 Ferritin-like superfamily JV59_26130 5272bd71901084ce0fca94d5bf3e0cbf 160 PRINTS PR00601 Bacterioferritin signature 23 43 8.3E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 JV59_26130 5272bd71901084ce0fca94d5bf3e0cbf 160 PRINTS PR00601 Bacterioferritin signature 44 64 8.3E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 JV59_26130 5272bd71901084ce0fca94d5bf3e0cbf 160 PRINTS PR00601 Bacterioferritin signature 3 22 8.3E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 JV59_26130 5272bd71901084ce0fca94d5bf3e0cbf 160 PRINTS PR00601 Bacterioferritin signature 65 85 8.3E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 JV59_26130 5272bd71901084ce0fca94d5bf3e0cbf 160 PRINTS PR00601 Bacterioferritin signature 107 127 8.3E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 JV59_26130 5272bd71901084ce0fca94d5bf3e0cbf 160 PRINTS PR00601 Bacterioferritin signature 86 106 8.3E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 JV59_26130 5272bd71901084ce0fca94d5bf3e0cbf 160 PRINTS PR00601 Bacterioferritin signature 128 149 8.3E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 JV59_26130 5272bd71901084ce0fca94d5bf3e0cbf 160 Pfam PF00210 Ferritin-like domain 8 143 6.6E-40 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 JV59_26130 5272bd71901084ce0fca94d5bf3e0cbf 160 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 JV59_39705 258930342d086e349e562314a755d4ff 672 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 JV59_39705 258930342d086e349e562314a755d4ff 672 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 7.5E-73 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 JV59_39705 258930342d086e349e562314a755d4ff 672 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 1.5E-77 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 JV59_39705 258930342d086e349e562314a755d4ff 672 Gene3D G3DSA:3.40.50.300 4 266 5.8E-100 T 14-10-2018 JV59_39705 258930342d086e349e562314a755d4ff 672 SUPERFAMILY SSF52540 1 640 6.97E-162 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_39705 258930342d086e349e562314a755d4ff 672 Gene3D G3DSA:1.10.10.160 108 181 5.8E-100 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily JV59_39705 258930342d086e349e562314a755d4ff 672 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.77 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 JV59_39705 258930342d086e349e562314a755d4ff 672 Gene3D G3DSA:1.10.486.10 377 546 1.1E-123 T 14-10-2018 JV59_39705 258930342d086e349e562314a755d4ff 672 Gene3D G3DSA:3.40.50.300 274 634 1.1E-123 T 14-10-2018 JV59_39830 9fcdbaba26b61d80ef6483692c2bf1e5 286 SUPERFAMILY SSF51658 30 258 2.07E-10 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily JV59_39830 9fcdbaba26b61d80ef6483692c2bf1e5 286 Pfam PF05114 Protein of unknown function (DUF692) 9 272 8.8E-105 T 14-10-2018 IPR007801 Uncharacterised protein family UPF0276 JV59_39830 9fcdbaba26b61d80ef6483692c2bf1e5 286 Hamap MF_00697 UPF0276 protein . 10 282 43.85 T 14-10-2018 IPR007801 Uncharacterised protein family UPF0276 JV59_39830 9fcdbaba26b61d80ef6483692c2bf1e5 286 Gene3D G3DSA:3.20.20.150 6 282 2.9E-85 T 14-10-2018 JV59_26655 76209b6a2f56104f22b0d2f6010d31cb 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 4.0E-42 T 14-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 JV59_26655 76209b6a2f56104f22b0d2f6010d31cb 132 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JV59_26655 76209b6a2f56104f22b0d2f6010d31cb 132 SUPERFAMILY SSF55811 1 128 1.0E-34 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JV59_26655 76209b6a2f56104f22b0d2f6010d31cb 132 Gene3D G3DSA:3.90.79.10 1 132 9.2E-40 T 14-10-2018 JV59_26655 76209b6a2f56104f22b0d2f6010d31cb 132 PRINTS PR00502 NUDIX hydrolase family signature 34 48 9.6E-10 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 JV59_26655 76209b6a2f56104f22b0d2f6010d31cb 132 PRINTS PR00502 NUDIX hydrolase family signature 48 63 9.6E-10 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 JV59_26655 76209b6a2f56104f22b0d2f6010d31cb 132 Pfam PF00293 NUDIX domain 6 125 1.0E-20 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JV59_01660 59b41abbd7daa58f91c4987ecde913e3 340 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 46.074 T 14-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 JV59_01660 59b41abbd7daa58f91c4987ecde913e3 340 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 3.8E-57 T 14-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 JV59_01660 59b41abbd7daa58f91c4987ecde913e3 340 Gene3D G3DSA:3.40.50.150 158 340 1.2E-41 T 14-10-2018 JV59_01660 59b41abbd7daa58f91c4987ecde913e3 340 SUPERFAMILY SSF53335 113 324 1.92E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_01660 59b41abbd7daa58f91c4987ecde913e3 340 Gene3D G3DSA:3.40.50.150 1 157 7.6E-50 T 14-10-2018 JV59_01660 59b41abbd7daa58f91c4987ecde913e3 340 Pfam PF05175 Methyltransferase small domain 171 336 9.3E-60 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 JV59_01660 59b41abbd7daa58f91c4987ecde913e3 340 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JV59_27490 d1ecb1c97309f287a3320f0d0c2cd261 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 414 5.5E-23 T 14-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 JV59_27490 d1ecb1c97309f287a3320f0d0c2cd261 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 8.4E-48 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase JV59_27490 d1ecb1c97309f287a3320f0d0c2cd261 418 SUPERFAMILY SSF69075 315 416 3.92E-28 T 14-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 JV59_27490 d1ecb1c97309f287a3320f0d0c2cd261 418 Gene3D G3DSA:3.40.50.720 159 311 1.1E-43 T 14-10-2018 JV59_27490 d1ecb1c97309f287a3320f0d0c2cd261 418 Gene3D G3DSA:3.30.460.30 1 156 2.3E-58 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 JV59_27490 d1ecb1c97309f287a3320f0d0c2cd261 418 SUPERFAMILY SSF69742 1 156 1.24E-48 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 JV59_27490 d1ecb1c97309f287a3320f0d0c2cd261 418 SUPERFAMILY SSF51735 160 313 4.09E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_27490 d1ecb1c97309f287a3320f0d0c2cd261 418 PIRSF PIRSF000445 1 418 2.4E-159 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 JV59_27490 d1ecb1c97309f287a3320f0d0c2cd261 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 5.0E-145 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 JV59_27490 d1ecb1c97309f287a3320f0d0c2cd261 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 14-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 JV59_27490 d1ecb1c97309f287a3320f0d0c2cd261 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.707 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 JV59_27490 d1ecb1c97309f287a3320f0d0c2cd261 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 1.2E-51 T 14-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 JV59_31645 a8d65c5656f685786e25dc618cc00130 638 Gene3D G3DSA:3.40.50.300 281 551 4.0E-66 T 14-10-2018 JV59_31645 a8d65c5656f685786e25dc618cc00130 638 SUPERFAMILY SSF52540 3 240 8.74E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_31645 a8d65c5656f685786e25dc618cc00130 638 Gene3D G3DSA:1.10.287.380 554 637 9.3E-30 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 JV59_31645 a8d65c5656f685786e25dc618cc00130 638 Gene3D G3DSA:3.40.50.300 7 279 1.4E-68 T 14-10-2018 JV59_31645 a8d65c5656f685786e25dc618cc00130 638 Pfam PF16326 ABC transporter C-terminal domain 564 632 6.1E-22 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 JV59_31645 a8d65c5656f685786e25dc618cc00130 638 SUPERFAMILY SSF52540 312 513 4.42E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_31645 a8d65c5656f685786e25dc618cc00130 638 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_31645 a8d65c5656f685786e25dc618cc00130 638 Pfam PF00005 ABC transporter 19 185 1.0E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_31645 a8d65c5656f685786e25dc618cc00130 638 Pfam PF00005 ABC transporter 336 469 7.5E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_31645 a8d65c5656f685786e25dc618cc00130 638 SMART SM00382 28 230 1.0E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_31645 a8d65c5656f685786e25dc618cc00130 638 SMART SM00382 344 514 7.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_31645 a8d65c5656f685786e25dc618cc00130 638 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_31645 a8d65c5656f685786e25dc618cc00130 638 Pfam PF12848 ABC transporter 224 298 1.1E-11 T 14-10-2018 IPR032781 ABC-transporter extension domain JV59_40310 0efd62ff00843a9ee6a86ddb61d55b92 248 PIRSF PIRSF008159 31 243 1.7E-58 T 14-10-2018 IPR016537 Uncharacterised conserved protein UCP008159, JV59_40310 0efd62ff00843a9ee6a86ddb61d55b92 248 Pfam PF06226 Protein of unknown function (DUF1007) 43 242 2.0E-50 T 14-10-2018 IPR010412 Protein of unknown function DUF1007 JV59_20675 12ebddcb68b9f5eba24129ca1b2a6fad 315 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 47 304 4.1E-9 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase JV59_20675 12ebddcb68b9f5eba24129ca1b2a6fad 315 Gene3D G3DSA:3.60.10.10 3 312 1.2E-30 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JV59_20675 12ebddcb68b9f5eba24129ca1b2a6fad 315 SUPERFAMILY SSF56219 5 312 4.06E-32 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JV59_11455 744cec0dd0b408ec6e021bc09bb0ace3 216 Pfam PF04391 Protein of unknown function (DUF533) 35 214 2.9E-60 T 14-10-2018 IPR007486 Inner membrane protein YebE JV59_11455 744cec0dd0b408ec6e021bc09bb0ace3 216 SUPERFAMILY SSF158682 74 215 2.49E-24 T 14-10-2018 IPR029024 TerB-like JV59_11455 744cec0dd0b408ec6e021bc09bb0ace3 216 Gene3D G3DSA:1.10.3680.10 84 216 1.3E-8 T 14-10-2018 IPR029024 TerB-like JV59_38440 3a8f2a8f5d354e7fd0310c39281b63cb 476 SUPERFAMILY SSF53738 247 382 1.06E-7 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_38440 3a8f2a8f5d354e7fd0310c39281b63cb 476 Gene3D G3DSA:3.40.120.10 9 157 7.6E-40 T 14-10-2018 JV59_38440 3a8f2a8f5d354e7fd0310c39281b63cb 476 SUPERFAMILY SSF53738 14 143 1.02E-31 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_38440 3a8f2a8f5d354e7fd0310c39281b63cb 476 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 419 467 9.9E-7 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_38440 3a8f2a8f5d354e7fd0310c39281b63cb 476 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 264 382 1.5E-10 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_38440 3a8f2a8f5d354e7fd0310c39281b63cb 476 Gene3D G3DSA:3.40.120.10 260 378 2.2E-38 T 14-10-2018 JV59_38440 3a8f2a8f5d354e7fd0310c39281b63cb 476 Gene3D G3DSA:3.40.120.10 179 259 1.8E-31 T 14-10-2018 JV59_38440 3a8f2a8f5d354e7fd0310c39281b63cb 476 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 163 259 3.5E-7 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_38440 3a8f2a8f5d354e7fd0310c39281b63cb 476 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 105 114 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_38440 3a8f2a8f5d354e7fd0310c39281b63cb 476 SUPERFAMILY SSF53738 162 261 4.32E-10 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_38440 3a8f2a8f5d354e7fd0310c39281b63cb 476 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 17 138 3.3E-26 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_38440 3a8f2a8f5d354e7fd0310c39281b63cb 476 Gene3D G3DSA:3.30.310.50 380 476 8.4E-26 T 14-10-2018 JV59_38440 3a8f2a8f5d354e7fd0310c39281b63cb 476 SUPERFAMILY SSF55957 422 471 1.96E-11 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_25825 6bef9351f1653d60a2e51efaf1bd2bf8 297 SUPERFAMILY SSF103481 44 109 2.48E-5 T 14-10-2018 JV59_25825 6bef9351f1653d60a2e51efaf1bd2bf8 297 SUPERFAMILY SSF103481 189 283 2.75E-5 T 14-10-2018 JV59_34290 97eeadffa1fd325f0504f296dab5a697 155 SMART SM00344 3 112 1.2E-48 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 JV59_34290 97eeadffa1fd325f0504f296dab5a697 155 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site JV59_34290 97eeadffa1fd325f0504f296dab5a697 155 Gene3D G3DSA:3.30.70.920 56 140 9.0E-23 T 14-10-2018 JV59_34290 97eeadffa1fd325f0504f296dab5a697 155 SUPERFAMILY SSF54909 63 152 1.02E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_34290 97eeadffa1fd325f0504f296dab5a697 155 SUPERFAMILY SSF46785 2 85 1.82E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_34290 97eeadffa1fd325f0504f296dab5a697 155 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 1.0E-19 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JV59_34290 97eeadffa1fd325f0504f296dab5a697 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 3.4E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_34290 97eeadffa1fd325f0504f296dab5a697 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 3.4E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_34290 97eeadffa1fd325f0504f296dab5a697 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 3.4E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_34290 97eeadffa1fd325f0504f296dab5a697 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 1.5E-18 T 14-10-2018 JV59_34290 97eeadffa1fd325f0504f296dab5a697 155 Gene3D G3DSA:1.10.10.10 4 55 6.1E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_39175 48934a56efb6b3470f607f69e3f670c1 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 326 1.8E-138 T 14-10-2018 IPR014188 Acrylyl-CoA reductase AcuI JV59_39175 48934a56efb6b3470f607f69e3f670c1 326 SMART SM00829 13 324 5.8E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JV59_39175 48934a56efb6b3470f607f69e3f670c1 326 Gene3D G3DSA:3.90.180.10 17 325 3.3E-123 T 14-10-2018 JV59_39175 48934a56efb6b3470f607f69e3f670c1 326 Pfam PF00107 Zinc-binding dehydrogenase 159 272 3.1E-12 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JV59_39175 48934a56efb6b3470f607f69e3f670c1 326 Gene3D G3DSA:3.40.50.720 126 294 3.3E-123 T 14-10-2018 JV59_39175 48934a56efb6b3470f607f69e3f670c1 326 SUPERFAMILY SSF51735 116 289 1.15E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_39175 48934a56efb6b3470f607f69e3f670c1 326 SUPERFAMILY SSF50129 2 146 4.41E-44 T 14-10-2018 IPR011032 GroES-like superfamily JV59_39175 48934a56efb6b3470f607f69e3f670c1 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 7.1E-6 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JV59_26885 cc6f2a3683654878bc7683e38442a825 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.707 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 JV59_26885 cc6f2a3683654878bc7683e38442a825 185 SUPERFAMILY SSF55194 2 184 3.14E-72 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 JV59_26885 cc6f2a3683654878bc7683e38442a825 185 Gene3D G3DSA:1.10.132.20 1 34 3.8E-9 T 14-10-2018 JV59_26885 cc6f2a3683654878bc7683e38442a825 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 2.1E-76 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 JV59_26885 cc6f2a3683654878bc7683e38442a825 185 Gene3D G3DSA:1.10.132.20 100 185 3.1E-28 T 14-10-2018 JV59_26885 cc6f2a3683654878bc7683e38442a825 185 Gene3D G3DSA:3.30.1360.40 35 99 3.9E-28 T 14-10-2018 JV59_26885 cc6f2a3683654878bc7683e38442a825 185 Pfam PF01765 Ribosome recycling factor 20 183 1.0E-62 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 JV59_31965 a6a6379419aeda466a8d818e411c5603 443 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 6.7E-98 T 14-10-2018 IPR010263 Type VI secretion protein, VC_A0114 JV59_31965 a6a6379419aeda466a8d818e411c5603 443 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 441 2.0E-106 T 14-10-2018 IPR010263 Type VI secretion protein, VC_A0114 JV59_34135 8c27ed5c88c5285615fb3732b43f076b 731 Pfam PF13632 Glycosyl transferase family group 2 157 373 3.3E-43 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 JV59_34135 8c27ed5c88c5285615fb3732b43f076b 731 SUPERFAMILY SSF160246 476 615 6.8E-24 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily JV59_34135 8c27ed5c88c5285615fb3732b43f076b 731 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 514 608 1.7E-14 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal JV59_34135 8c27ed5c88c5285615fb3732b43f076b 731 SUPERFAMILY SSF53448 63 350 9.68E-12 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_22965 3effe1d6218728ce8cfeabcded3aff9e 542 Pfam PF01274 Malate synthase 24 538 1.6E-193 T 14-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 JV59_22965 3effe1d6218728ce8cfeabcded3aff9e 542 Gene3D G3DSA:1.20.1220.12 419 539 7.6E-46 T 14-10-2018 JV59_22965 3effe1d6218728ce8cfeabcded3aff9e 542 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 29 538 1.7E-228 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 JV59_22965 3effe1d6218728ce8cfeabcded3aff9e 542 Gene3D G3DSA:3.20.20.360 9 417 9.1E-176 T 14-10-2018 JV59_22965 3effe1d6218728ce8cfeabcded3aff9e 542 PIRSF PIRSF001363 7 540 9.6E-239 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 JV59_22965 3effe1d6218728ce8cfeabcded3aff9e 542 SUPERFAMILY SSF51645 23 538 8.76E-178 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 JV59_28270 cd1a742fc5bf2001f8cae5ce7a25de38 331 Gene3D G3DSA:3.30.360.10 149 314 2.8E-155 T 14-10-2018 JV59_28270 cd1a742fc5bf2001f8cae5ce7a25de38 331 Gene3D G3DSA:3.40.50.720 4 326 2.8E-155 T 14-10-2018 JV59_28270 cd1a742fc5bf2001f8cae5ce7a25de38 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 1.6E-137 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_28270 cd1a742fc5bf2001f8cae5ce7a25de38 331 SMART SM00846 3 150 8.8E-97 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_28270 cd1a742fc5bf2001f8cae5ce7a25de38 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 3.5E-70 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_28270 cd1a742fc5bf2001f8cae5ce7a25de38 331 PIRSF PIRSF000149 1 331 2.9E-134 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_28270 cd1a742fc5bf2001f8cae5ce7a25de38 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_28270 cd1a742fc5bf2001f8cae5ce7a25de38 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 2.5E-40 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_28270 cd1a742fc5bf2001f8cae5ce7a25de38 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 1.6E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_28270 cd1a742fc5bf2001f8cae5ce7a25de38 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 1.6E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_28270 cd1a742fc5bf2001f8cae5ce7a25de38 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 1.6E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_28270 cd1a742fc5bf2001f8cae5ce7a25de38 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.6E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_28270 cd1a742fc5bf2001f8cae5ce7a25de38 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 1.6E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_28270 cd1a742fc5bf2001f8cae5ce7a25de38 331 SUPERFAMILY SSF51735 3 166 1.77E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_28270 cd1a742fc5bf2001f8cae5ce7a25de38 331 SUPERFAMILY SSF55347 149 312 3.43E-78 T 14-10-2018 JV59_30190 81945bf876308391b498ee02338559ac 233 Pfam PF00849 RNA pseudouridylate synthase 61 193 2.3E-15 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_30190 81945bf876308391b498ee02338559ac 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 225 6.4E-49 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 JV59_30190 81945bf876308391b498ee02338559ac 233 SUPERFAMILY SSF55120 60 228 6.24E-44 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_30190 81945bf876308391b498ee02338559ac 233 Gene3D G3DSA:3.30.70.580 62 228 6.6E-57 T 14-10-2018 JV59_30190 81945bf876308391b498ee02338559ac 233 SUPERFAMILY SSF55174 1 83 8.83E-12 T 14-10-2018 JV59_30190 81945bf876308391b498ee02338559ac 233 Gene3D G3DSA:3.30.70.1560 127 210 6.6E-57 T 14-10-2018 JV59_30190 81945bf876308391b498ee02338559ac 233 Gene3D G3DSA:3.10.290.10 1 61 2.2E-17 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 JV59_30190 81945bf876308391b498ee02338559ac 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 JV59_30190 81945bf876308391b498ee02338559ac 233 Pfam PF01479 S4 domain 1 42 2.0E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_30190 81945bf876308391b498ee02338559ac 233 SMART SM00363 1 59 3.8E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_36355 e240544c1168f45d7ba3ab70eb03d207 247 SMART SM00858 44 106 3.7E-9 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 JV59_36355 e240544c1168f45d7ba3ab70eb03d207 247 SUPERFAMILY SSF51269 47 104 9.42E-5 T 14-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 JV59_36355 e240544c1168f45d7ba3ab70eb03d207 247 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 113 215 4.5E-28 T 14-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain JV59_36355 e240544c1168f45d7ba3ab70eb03d207 247 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 226 1.2E-72 T 14-10-2018 IPR017592 Pilus assembly, Flp-type CpaB JV59_36355 e240544c1168f45d7ba3ab70eb03d207 247 Pfam PF08666 SAF domain 45 105 6.7E-8 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 JV59_26100 ac9f5063d6c70c3f3030a4dbbccc1b50 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 1.6E-45 T 14-10-2018 IPR017462 Sulphur relay, TusC/DsrF JV59_26100 ac9f5063d6c70c3f3030a4dbbccc1b50 118 SUPERFAMILY SSF75169 3 118 2.88E-37 T 14-10-2018 IPR027396 DsrEFH-like JV59_26100 ac9f5063d6c70c3f3030a4dbbccc1b50 118 Gene3D G3DSA:3.40.1260.10 1 118 1.4E-37 T 14-10-2018 IPR027396 DsrEFH-like JV59_26100 ac9f5063d6c70c3f3030a4dbbccc1b50 118 Pfam PF02635 DsrE/DsrF-like family 4 118 1.0E-23 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein JV59_28195 a67dd410709f0bf6e2f0a7bc924ac401 323 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 23 322 1.2E-112 T 14-10-2018 IPR011970 Lytic murein transglycosylase JV59_28195 a67dd410709f0bf6e2f0a7bc924ac401 323 Gene3D G3DSA:1.10.8.350 33 199 2.2E-93 T 14-10-2018 JV59_28195 a67dd410709f0bf6e2f0a7bc924ac401 323 Gene3D G3DSA:1.10.530.10 66 318 2.2E-93 T 14-10-2018 JV59_28195 a67dd410709f0bf6e2f0a7bc924ac401 323 SUPERFAMILY SSF53955 10 322 7.69E-103 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily JV59_28195 a67dd410709f0bf6e2f0a7bc924ac401 323 Pfam PF13406 Transglycosylase SLT domain 23 319 3.8E-112 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 JV59_26910 f316436f07c6c8cb7583f5d4c3d81c77 262 SUPERFAMILY SSF51161 1 262 1.57E-75 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JV59_26910 f316436f07c6c8cb7583f5d4c3d81c77 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 8.7E-96 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 JV59_26910 f316436f07c6c8cb7583f5d4c3d81c77 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 36 69 1.3E-5 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_26910 f316436f07c6c8cb7583f5d4c3d81c77 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 1.0E-6 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_26910 f316436f07c6c8cb7583f5d4c3d81c77 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 34 1.3E-5 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_26910 f316436f07c6c8cb7583f5d4c3d81c77 262 Gene3D G3DSA:1.20.1180.10 197 262 4.4E-22 T 14-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 JV59_26910 f316436f07c6c8cb7583f5d4c3d81c77 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 42.281 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 JV59_26910 f316436f07c6c8cb7583f5d4c3d81c77 262 PIRSF PIRSF000456 4 262 3.7E-96 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 JV59_26910 f316436f07c6c8cb7583f5d4c3d81c77 262 Gene3D G3DSA:2.160.10.10 1 196 1.1E-50 T 14-10-2018 JV59_26910 f316436f07c6c8cb7583f5d4c3d81c77 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 2.6E-27 T 14-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 JV59_29350 4a42e77009fc916167ee2a48968fa1a9 539 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 98 396 3.5E-93 T 14-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal JV59_29350 4a42e77009fc916167ee2a48968fa1a9 539 SMART SM00640 98 500 1.1E-124 T 14-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 JV59_29350 4a42e77009fc916167ee2a48968fa1a9 539 Gene3D G3DSA:2.60.120.560 413 535 7.7E-22 T 14-10-2018 JV59_29350 4a42e77009fc916167ee2a48968fa1a9 539 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 98 111 - T 14-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 JV59_29350 4a42e77009fc916167ee2a48968fa1a9 539 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 90 510 2.8E-138 T 14-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 JV59_29350 4a42e77009fc916167ee2a48968fa1a9 539 SUPERFAMILY SSF49899 397 532 2.61E-21 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily JV59_29350 4a42e77009fc916167ee2a48968fa1a9 539 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 418 532 1.6E-18 T 14-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal JV59_29350 4a42e77009fc916167ee2a48968fa1a9 539 Gene3D G3DSA:2.115.10.20 70 412 8.1E-100 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily JV59_29350 4a42e77009fc916167ee2a48968fa1a9 539 SUPERFAMILY SSF75005 89 397 3.14E-95 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily JV59_30695 6a02ea940390be84d55434211e5606db 355 SUPERFAMILY SSF53756 9 339 1.2E-56 T 14-10-2018 JV59_30695 6a02ea940390be84d55434211e5606db 355 Gene3D G3DSA:3.40.50.2000 8 170 3.2E-10 T 14-10-2018 JV59_30695 6a02ea940390be84d55434211e5606db 355 Gene3D G3DSA:3.40.50.2000 171 324 6.0E-30 T 14-10-2018 JV59_30695 6a02ea940390be84d55434211e5606db 355 Pfam PF00534 Glycosyl transferases group 1 171 316 1.7E-22 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 JV59_30695 6a02ea940390be84d55434211e5606db 355 Pfam PF13579 Glycosyl transferase 4-like domain 19 156 6.2E-12 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 JV59_17710 eb08b98d10530c86caae0086c98bced9 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 6.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_17710 eb08b98d10530c86caae0086c98bced9 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 6.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_17710 eb08b98d10530c86caae0086c98bced9 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 6.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_17710 eb08b98d10530c86caae0086c98bced9 308 Gene3D G3DSA:3.40.190.10 101 298 1.1E-56 T 14-10-2018 JV59_17710 eb08b98d10530c86caae0086c98bced9 308 SUPERFAMILY SSF53850 95 304 1.18E-36 T 14-10-2018 JV59_17710 eb08b98d10530c86caae0086c98bced9 308 SUPERFAMILY SSF46785 10 116 1.0E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_17710 eb08b98d10530c86caae0086c98bced9 308 Gene3D G3DSA:1.10.10.10 9 100 2.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_17710 eb08b98d10530c86caae0086c98bced9 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 3.6E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_17710 eb08b98d10530c86caae0086c98bced9 308 Gene3D G3DSA:3.40.190.10 169 270 1.1E-56 T 14-10-2018 JV59_17710 eb08b98d10530c86caae0086c98bced9 308 Pfam PF03466 LysR substrate binding domain 95 301 4.3E-35 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_26685 48663d12e626f3da68e734a4e4005a23 294 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 182 189 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 JV59_26685 48663d12e626f3da68e734a4e4005a23 294 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 10 284 4.6E-106 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 JV59_26685 48663d12e626f3da68e734a4e4005a23 294 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 222 238 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 JV59_26685 48663d12e626f3da68e734a4e4005a23 294 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 76 84 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 JV59_26685 48663d12e626f3da68e734a4e4005a23 294 Pfam PF01261 Xylose isomerase-like TIM barrel 27 246 1.8E-41 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain JV59_26685 48663d12e626f3da68e734a4e4005a23 294 Gene3D G3DSA:3.20.20.150 8 291 5.4E-111 T 14-10-2018 JV59_26685 48663d12e626f3da68e734a4e4005a23 294 SMART SM00518 10 286 4.6E-121 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 JV59_26685 48663d12e626f3da68e734a4e4005a23 294 Hamap MF_00152 Probable endonuclease 4 [nfo]. 9 286 42.702 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 JV59_26685 48663d12e626f3da68e734a4e4005a23 294 SUPERFAMILY SSF51658 10 284 2.09E-98 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily JV59_40095 582ddc4fe579ad1ba719193ec15e84f8 78 Pfam PF10678 Protein of unknown function (DUF2492) 4 77 4.0E-24 T 14-10-2018 IPR019620 Putative metal-binding protein JV59_40095 582ddc4fe579ad1ba719193ec15e84f8 78 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 4 78 8.7E-26 T 14-10-2018 IPR019620 Putative metal-binding protein JV59_34150 f1e3c28d5daf87a1614a2d27c8471dba 616 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 19 349 6.4E-88 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 JV59_34150 f1e3c28d5daf87a1614a2d27c8471dba 616 SUPERFAMILY SSF52279 394 616 1.57E-9 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 JV59_34150 f1e3c28d5daf87a1614a2d27c8471dba 616 Gene3D G3DSA:3.40.50.1700 380 616 2.0E-36 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 JV59_34150 f1e3c28d5daf87a1614a2d27c8471dba 616 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 263 280 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 JV59_34150 f1e3c28d5daf87a1614a2d27c8471dba 616 Gene3D G3DSA:3.20.20.300 1 377 6.1E-120 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 JV59_34150 f1e3c28d5daf87a1614a2d27c8471dba 616 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 394 616 6.8E-10 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 JV59_34150 f1e3c28d5daf87a1614a2d27c8471dba 616 SUPERFAMILY SSF51445 19 357 9.37E-82 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_37060 519bb4932a1943e3959c465f94d85b20 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 331 7.4E-46 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 JV59_37060 519bb4932a1943e3959c465f94d85b20 574 SUPERFAMILY SSF52518 4 183 7.15E-64 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_37060 519bb4932a1943e3959c465f94d85b20 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 JV59_37060 519bb4932a1943e3959c465f94d85b20 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 5 569 3.4E-271 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 JV59_37060 519bb4932a1943e3959c465f94d85b20 574 Gene3D G3DSA:3.40.50.1220 192 362 8.1E-60 T 14-10-2018 JV59_37060 519bb4932a1943e3959c465f94d85b20 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 173 9.8E-59 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 JV59_37060 519bb4932a1943e3959c465f94d85b20 574 SUPERFAMILY SSF52518 373 567 3.04E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_37060 519bb4932a1943e3959c465f94d85b20 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 1.6E-50 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JV59_37060 519bb4932a1943e3959c465f94d85b20 574 Gene3D G3DSA:3.40.50.970 1 182 2.1E-73 T 14-10-2018 JV59_37060 519bb4932a1943e3959c465f94d85b20 574 Gene3D G3DSA:3.40.50.970 366 574 6.8E-66 T 14-10-2018 JV59_37060 519bb4932a1943e3959c465f94d85b20 574 SUPERFAMILY SSF52467 191 364 2.76E-62 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JV59_32180 fc6dd19eabdef3127bbb678731c374f4 528 Gene3D G3DSA:1.25.40.10 76 406 9.9E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_32180 fc6dd19eabdef3127bbb678731c374f4 528 SUPERFAMILY SSF48452 271 400 3.8E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_17965 c71722eef580659f2ea904e0ee5d0e5f 228 Pfam PF13280 WYL domain 139 221 8.2E-18 T 14-10-2018 IPR026881 WYL domain JV59_17965 c71722eef580659f2ea904e0ee5d0e5f 228 Gene3D G3DSA:1.10.10.10 1 64 2.5E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_17965 c71722eef580659f2ea904e0ee5d0e5f 228 Pfam PF08279 HTH domain 6 60 2.2E-17 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 JV59_17965 c71722eef580659f2ea904e0ee5d0e5f 228 SUPERFAMILY SSF46785 1 61 5.04E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_19865 11679698eaf3473708138a06fc720fc7 312 SUPERFAMILY SSF81345 4 306 1.96E-63 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JV59_19865 11679698eaf3473708138a06fc720fc7 312 Pfam PF01032 FecCD transport family 8 306 3.4E-62 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 JV59_19865 11679698eaf3473708138a06fc720fc7 312 Gene3D G3DSA:1.10.3470.10 1 311 6.3E-62 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JV59_19625 50602089a3d16c2bb2a11d3a5364a471 351 SUPERFAMILY SSF111369 50 269 6.54E-32 T 14-10-2018 JV59_19625 50602089a3d16c2bb2a11d3a5364a471 351 Gene3D G3DSA:2.40.30.170 46 272 6.9E-71 T 14-10-2018 JV59_19625 50602089a3d16c2bb2a11d3a5364a471 351 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 345 9.3E-66 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 JV59_19625 50602089a3d16c2bb2a11d3a5364a471 351 Pfam PF13533 Biotin-lipoyl like 63 105 2.0E-11 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain JV59_19625 50602089a3d16c2bb2a11d3a5364a471 351 Pfam PF13437 HlyD family secretion protein 157 262 1.4E-9 T 14-10-2018 JV59_19625 50602089a3d16c2bb2a11d3a5364a471 351 Gene3D G3DSA:1.10.287.470 93 152 6.9E-71 T 14-10-2018 JV59_19625 50602089a3d16c2bb2a11d3a5364a471 351 Gene3D G3DSA:2.40.50.100 59 191 6.9E-71 T 14-10-2018 JV59_19625 50602089a3d16c2bb2a11d3a5364a471 351 Gene3D G3DSA:2.40.420.20 45 342 6.9E-71 T 14-10-2018 JV59_37760 1a73909f9a800fb65c590c9490611585 150 Gene3D G3DSA:3.40.630.30 1 147 2.6E-42 T 14-10-2018 JV59_37760 1a73909f9a800fb65c590c9490611585 150 SUPERFAMILY SSF55729 1 148 1.1E-36 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_37760 1a73909f9a800fb65c590c9490611585 150 Pfam PF13673 Acetyltransferase (GNAT) domain 46 148 2.2E-15 T 14-10-2018 IPR000182 GNAT domain JV59_37085 71f06f604dc1fbe96edfa67ecbecddf4 174 Pfam PF01569 PAP2 superfamily 68 169 2.6E-19 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JV59_37085 71f06f604dc1fbe96edfa67ecbecddf4 174 Gene3D G3DSA:1.20.144.10 7 174 6.7E-19 T 14-10-2018 JV59_37085 71f06f604dc1fbe96edfa67ecbecddf4 174 SMART SM00014 64 170 2.7E-11 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JV59_37085 71f06f604dc1fbe96edfa67ecbecddf4 174 SUPERFAMILY SSF48317 5 171 2.09E-35 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily JV59_35605 b8cfc34ad3eaa3c8429991fe892eb898 554 SUPERFAMILY SSF56235 1 196 6.69E-57 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JV59_35605 b8cfc34ad3eaa3c8429991fe892eb898 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 372 8.1E-116 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 JV59_35605 b8cfc34ad3eaa3c8429991fe892eb898 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 9.4E-40 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain JV59_35605 b8cfc34ad3eaa3c8429991fe892eb898 554 SUPERFAMILY SSF52402 208 479 2.21E-74 T 14-10-2018 JV59_35605 b8cfc34ad3eaa3c8429991fe892eb898 554 Gene3D G3DSA:3.60.20.10 2 193 5.5E-70 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JV59_35605 b8cfc34ad3eaa3c8429991fe892eb898 554 PIRSF PIRSF001589 1 374 6.9E-105 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 JV59_35605 b8cfc34ad3eaa3c8429991fe892eb898 554 PIRSF PIRSF001589 360 507 2.0E-28 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 JV59_35605 b8cfc34ad3eaa3c8429991fe892eb898 554 Pfam PF00733 Asparagine synthase 211 366 7.6E-56 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 JV59_35605 b8cfc34ad3eaa3c8429991fe892eb898 554 Gene3D G3DSA:3.40.50.620 194 514 2.6E-112 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_20205 31d657bf4e3c1a738594a2ac4db33a13 463 PIRSF PIRSF002808 9 461 9.6E-106 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 JV59_20205 31d657bf4e3c1a738594a2ac4db33a13 463 Gene3D G3DSA:1.20.1250.20 29 230 6.6E-33 T 14-10-2018 JV59_20205 31d657bf4e3c1a738594a2ac4db33a13 463 Gene3D G3DSA:1.20.1250.20 246 460 7.3E-37 T 14-10-2018 JV59_20205 31d657bf4e3c1a738594a2ac4db33a13 463 Pfam PF07690 Major Facilitator Superfamily 35 396 3.3E-34 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_20205 31d657bf4e3c1a738594a2ac4db33a13 463 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 14-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 JV59_20205 31d657bf4e3c1a738594a2ac4db33a13 463 SUPERFAMILY SSF103473 17 449 1.7E-58 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_20205 31d657bf4e3c1a738594a2ac4db33a13 463 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 1.5E-137 T 14-10-2018 JV59_01700 0c34656d80312456d618c768f9cb42d8 281 SUPERFAMILY SSF161093 99 278 9.42E-45 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 JV59_01700 0c34656d80312456d618c768f9cb42d8 281 Gene3D G3DSA:1.10.357.20 93 278 5.6E-53 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain JV59_01700 0c34656d80312456d618c768f9cb42d8 281 Pfam PF01769 Divalent cation transporter 142 271 1.2E-27 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 JV59_27405 77a9c34eb87f78f08b18f269625e7842 397 Gene3D G3DSA:1.20.1330.10 266 373 6.7E-10 T 14-10-2018 JV59_27405 77a9c34eb87f78f08b18f269625e7842 397 Pfam PF00700 Bacterial flagellin C-terminal helical region 320 397 4.3E-5 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JV59_27405 77a9c34eb87f78f08b18f269625e7842 397 SUPERFAMILY SSF64518 2 397 3.79E-65 T 14-10-2018 JV59_27405 77a9c34eb87f78f08b18f269625e7842 397 Gene3D G3DSA:1.20.1330.10 42 222 1.4E-31 T 14-10-2018 JV59_27405 77a9c34eb87f78f08b18f269625e7842 397 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 2.7E-9 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JV59_27405 77a9c34eb87f78f08b18f269625e7842 397 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 397 2.7E-96 T 14-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 JV59_20500 99cbf8935b996546f7729212fc4b25be 364 SUPERFAMILY SSF161098 53 351 9.0E-50 T 14-10-2018 IPR035906 MetI-like superfamily JV59_20500 99cbf8935b996546f7729212fc4b25be 364 Gene3D G3DSA:1.10.3720.10 4 179 4.9E-24 T 14-10-2018 IPR035906 MetI-like superfamily JV59_20500 99cbf8935b996546f7729212fc4b25be 364 Gene3D G3DSA:1.10.3720.10 180 361 1.9E-37 T 14-10-2018 IPR035906 MetI-like superfamily JV59_20500 99cbf8935b996546f7729212fc4b25be 364 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 356 2.4E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_16130 8e82e1ae0828a07386eb78435c79caca 300 Pfam PF02574 Homocysteine S-methyltransferase 6 291 6.5E-52 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 JV59_16130 8e82e1ae0828a07386eb78435c79caca 300 PIRSF PIRSF037505 1 294 2.9E-14 T 14-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 JV59_16130 8e82e1ae0828a07386eb78435c79caca 300 SUPERFAMILY SSF82282 2 297 1.44E-73 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 JV59_16130 8e82e1ae0828a07386eb78435c79caca 300 Gene3D G3DSA:3.20.20.330 1 298 5.4E-66 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 JV59_35280 f98d255392aa79fce40e3d189f408e7b 377 Gene3D G3DSA:3.30.70.2120 174 275 3.4E-77 T 14-10-2018 JV59_35280 f98d255392aa79fce40e3d189f408e7b 377 SUPERFAMILY SSF64518 1 376 2.09E-94 T 14-10-2018 JV59_35280 f98d255392aa79fce40e3d189f408e7b 377 Gene3D G3DSA:1.20.1330.10 44 327 3.4E-77 T 14-10-2018 JV59_35280 f98d255392aa79fce40e3d189f408e7b 377 Pfam PF07196 Flagellin hook IN motif 204 246 3.9E-10 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 JV59_35280 f98d255392aa79fce40e3d189f408e7b 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 1.5E-23 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JV59_35280 f98d255392aa79fce40e3d189f408e7b 377 PRINTS PR00207 Flagellin signature 76 95 8.1E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JV59_35280 f98d255392aa79fce40e3d189f408e7b 377 PRINTS PR00207 Flagellin signature 37 54 8.1E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JV59_35280 f98d255392aa79fce40e3d189f408e7b 377 PRINTS PR00207 Flagellin signature 111 134 8.1E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JV59_35280 f98d255392aa79fce40e3d189f408e7b 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.2E-42 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JV59_35280 f98d255392aa79fce40e3d189f408e7b 377 Gene3D G3DSA:1.10.8.410 328 376 2.4E-18 T 14-10-2018 JV59_02175 dea87aa66efb05e0cb85dcd265c0c227 442 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 3 427 2.0E-213 T 14-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 JV59_02175 dea87aa66efb05e0cb85dcd265c0c227 442 SUPERFAMILY SSF47648 2 70 1.1E-21 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 JV59_02175 dea87aa66efb05e0cb85dcd265c0c227 442 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 1.7E-23 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JV59_02175 dea87aa66efb05e0cb85dcd265c0c227 442 PIRSF PIRSF000478 1 439 1.1E-149 T 14-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JV59_02175 dea87aa66efb05e0cb85dcd265c0c227 442 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 437 45.351 T 14-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 JV59_02175 dea87aa66efb05e0cb85dcd265c0c227 442 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 5.7E-49 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JV59_02175 dea87aa66efb05e0cb85dcd265c0c227 442 Gene3D G3DSA:3.40.1030.10 71 339 4.2E-101 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 JV59_02175 dea87aa66efb05e0cb85dcd265c0c227 442 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 2.3E-161 T 14-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 JV59_02175 dea87aa66efb05e0cb85dcd265c0c227 442 Gene3D G3DSA:3.90.1170.30 340 432 2.2E-29 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JV59_02175 dea87aa66efb05e0cb85dcd265c0c227 442 SMART SM00941 350 424 4.0E-28 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JV59_02175 dea87aa66efb05e0cb85dcd265c0c227 442 SUPERFAMILY SSF52418 74 334 5.63E-89 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 JV59_02175 dea87aa66efb05e0cb85dcd265c0c227 442 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 14-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JV59_02175 dea87aa66efb05e0cb85dcd265c0c227 442 Gene3D G3DSA:1.20.970.10 4 67 2.2E-25 T 14-10-2018 JV59_02175 dea87aa66efb05e0cb85dcd265c0c227 442 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 1.5E-21 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 JV59_02175 dea87aa66efb05e0cb85dcd265c0c227 442 SUPERFAMILY SSF54680 337 437 8.5E-29 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JV59_38105 942de95d1396e18a2beb426dd132879d 336 Gene3D G3DSA:3.40.50.1370 5 331 4.4E-142 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JV59_38105 942de95d1396e18a2beb426dd132879d 336 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 335 82.896 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 JV59_38105 942de95d1396e18a2beb426dd132879d 336 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 332 1.5E-55 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 JV59_38105 942de95d1396e18a2beb426dd132879d 336 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 4.2E-45 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 JV59_38105 942de95d1396e18a2beb426dd132879d 336 Gene3D G3DSA:3.40.50.1370 151 321 4.4E-142 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JV59_38105 942de95d1396e18a2beb426dd132879d 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.6E-24 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JV59_38105 942de95d1396e18a2beb426dd132879d 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 299 322 1.6E-24 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JV59_38105 942de95d1396e18a2beb426dd132879d 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 1.6E-24 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JV59_38105 942de95d1396e18a2beb426dd132879d 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 1.6E-24 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JV59_38105 942de95d1396e18a2beb426dd132879d 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 4.0E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JV59_38105 942de95d1396e18a2beb426dd132879d 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 4.0E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JV59_38105 942de95d1396e18a2beb426dd132879d 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 4.0E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JV59_38105 942de95d1396e18a2beb426dd132879d 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 4.0E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JV59_38105 942de95d1396e18a2beb426dd132879d 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 313 324 4.0E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JV59_38105 942de95d1396e18a2beb426dd132879d 336 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 334 9.9E-132 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JV59_38105 942de95d1396e18a2beb426dd132879d 336 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JV59_38105 942de95d1396e18a2beb426dd132879d 336 SUPERFAMILY SSF53671 4 335 1.7E-99 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JV59_17290 aa63d6a74cd4902d1b23898a2beca54d 292 SUPERFAMILY SSF53822 7 292 2.08E-86 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_17290 aa63d6a74cd4902d1b23898a2beca54d 292 Pfam PF13407 Periplasmic binding protein domain 27 277 1.6E-60 T 14-10-2018 IPR025997 Periplasmic binding protein JV59_17290 aa63d6a74cd4902d1b23898a2beca54d 292 Gene3D G3DSA:3.40.50.2300 125 259 4.2E-96 T 14-10-2018 JV59_17290 aa63d6a74cd4902d1b23898a2beca54d 292 Gene3D G3DSA:3.40.50.2300 29 277 4.2E-96 T 14-10-2018 JV59_37750 c095afae10a57a5f6f9b66e6bfdea820 653 PRINTS PR01607 Apyrase family signature 289 309 8.9E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_37750 c095afae10a57a5f6f9b66e6bfdea820 653 PRINTS PR01607 Apyrase family signature 434 457 8.9E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_37750 c095afae10a57a5f6f9b66e6bfdea820 653 PRINTS PR01607 Apyrase family signature 249 272 8.9E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_37750 c095afae10a57a5f6f9b66e6bfdea820 653 PRINTS PR01607 Apyrase family signature 536 555 8.9E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_37750 c095afae10a57a5f6f9b66e6bfdea820 653 PRINTS PR01607 Apyrase family signature 221 238 8.9E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_37750 c095afae10a57a5f6f9b66e6bfdea820 653 PRINTS PR01607 Apyrase family signature 28 46 8.9E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_37750 c095afae10a57a5f6f9b66e6bfdea820 653 ProSitePatterns PS00786 5'-nucleotidase signature 2. 115 126 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_37750 c095afae10a57a5f6f9b66e6bfdea820 653 Gene3D G3DSA:3.60.21.10 22 360 7.6E-137 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JV59_37750 c095afae10a57a5f6f9b66e6bfdea820 653 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 29 653 0.0 T 14-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 JV59_37750 c095afae10a57a5f6f9b66e6bfdea820 653 SUPERFAMILY SSF56300 23 360 5.2E-88 T 14-10-2018 JV59_37750 c095afae10a57a5f6f9b66e6bfdea820 653 Pfam PF02872 5'-nucleotidase, C-terminal domain 362 554 8.0E-20 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_37750 c095afae10a57a5f6f9b66e6bfdea820 653 SUPERFAMILY SSF55816 361 603 6.28E-36 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_37750 c095afae10a57a5f6f9b66e6bfdea820 653 Gene3D G3DSA:3.90.780.10 410 592 7.9E-49 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_37750 c095afae10a57a5f6f9b66e6bfdea820 653 Pfam PF00149 Calcineurin-like phosphoesterase 30 265 3.3E-10 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 JV59_07555 a0c0cc07207e21be96d3653ddf4a7fdf 216 PIRSF PIRSF000370 1 216 3.0E-63 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 JV59_07555 a0c0cc07207e21be96d3653ddf4a7fdf 216 Pfam PF13394 4Fe-4S single cluster domain 17 115 2.2E-9 T 14-10-2018 JV59_07555 a0c0cc07207e21be96d3653ddf4a7fdf 216 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 1 216 32.243 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 JV59_07555 a0c0cc07207e21be96d3653ddf4a7fdf 216 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 2 215 9.9E-109 T 14-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 JV59_07555 a0c0cc07207e21be96d3653ddf4a7fdf 216 SUPERFAMILY SSF102114 19 114 2.09E-7 T 14-10-2018 JV59_07555 a0c0cc07207e21be96d3653ddf4a7fdf 216 Pfam PF04055 Radical SAM superfamily 19 118 2.6E-8 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JV59_07555 a0c0cc07207e21be96d3653ddf4a7fdf 216 Gene3D G3DSA:3.20.20.70 1 216 2.7E-49 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_38385 f02c53c38285f5082e7fa1a665cca9f6 803 Pfam PF00742 Homoserine dehydrogenase 601 796 3.2E-43 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 JV59_38385 f02c53c38285f5082e7fa1a665cca9f6 803 SUPERFAMILY SSF53633 5 291 2.75E-60 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JV59_38385 f02c53c38285f5082e7fa1a665cca9f6 803 Gene3D G3DSA:3.30.2130.10 330 451 1.9E-5 T 14-10-2018 JV59_38385 f02c53c38285f5082e7fa1a665cca9f6 803 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JV59_38385 f02c53c38285f5082e7fa1a665cca9f6 803 Pfam PF00696 Amino acid kinase family 5 277 1.0E-44 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 JV59_38385 f02c53c38285f5082e7fa1a665cca9f6 803 Gene3D G3DSA:3.30.360.10 612 782 2.6E-102 T 14-10-2018 JV59_38385 f02c53c38285f5082e7fa1a665cca9f6 803 Gene3D G3DSA:3.40.50.720 452 797 2.6E-102 T 14-10-2018 JV59_38385 f02c53c38285f5082e7fa1a665cca9f6 803 SUPERFAMILY SSF51735 448 623 2.79E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_38385 f02c53c38285f5082e7fa1a665cca9f6 803 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 6.2E-64 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JV59_38385 f02c53c38285f5082e7fa1a665cca9f6 803 Gene3D G3DSA:1.20.120.1320 44 137 1.3E-74 T 14-10-2018 JV59_38385 f02c53c38285f5082e7fa1a665cca9f6 803 Gene3D G3DSA:3.40.1160.10 8 290 1.3E-74 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JV59_38385 f02c53c38285f5082e7fa1a665cca9f6 803 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 593 2.9E-15 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 JV59_38385 f02c53c38285f5082e7fa1a665cca9f6 803 SUPERFAMILY SSF55347 601 784 9.81E-46 T 14-10-2018 JV59_38385 f02c53c38285f5082e7fa1a665cca9f6 803 PIRSF PIRSF000727 5 803 6.2E-282 T 14-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JV59_38385 f02c53c38285f5082e7fa1a665cca9f6 803 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 647 669 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 JV59_19850 2a28d9391d5d069165efb8504d6c4011 582 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 JV59_19850 2a28d9391d5d069165efb8504d6c4011 582 Gene3D G3DSA:3.10.410.10 470 558 7.7E-32 T 14-10-2018 JV59_19850 2a28d9391d5d069165efb8504d6c4011 582 Pfam PF01268 Formate--tetrahydrofolate ligase 3 581 3.4E-243 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 JV59_19850 2a28d9391d5d069165efb8504d6c4011 582 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 345 356 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 JV59_19850 2a28d9391d5d069165efb8504d6c4011 582 Gene3D G3DSA:3.30.1510.10 129 264 1.4E-191 T 14-10-2018 JV59_19850 2a28d9391d5d069165efb8504d6c4011 582 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 582 43.096 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 JV59_19850 2a28d9391d5d069165efb8504d6c4011 582 Gene3D G3DSA:3.40.50.300 4 454 1.4E-191 T 14-10-2018 JV59_19850 2a28d9391d5d069165efb8504d6c4011 582 SUPERFAMILY SSF52540 4 580 5.09E-219 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 SUPERFAMILY SSF56014 633 808 6.94E-47 T 14-10-2018 JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 Gene3D G3DSA:1.10.10.1100 423 477 2.7E-12 T 14-10-2018 JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 Gene3D G3DSA:3.50.50.60 110 246 2.7E-80 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 SUPERFAMILY SSF51905 149 310 6.01E-26 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 Gene3D G3DSA:3.30.413.10 631 797 2.4E-31 T 14-10-2018 JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 3.1E-9 T 14-10-2018 JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 3.1E-9 T 14-10-2018 JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 3.1E-9 T 14-10-2018 JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 3.1E-9 T 14-10-2018 JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 679 695 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 3.5E-13 T 14-10-2018 JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 3.5E-13 T 14-10-2018 JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 3.5E-13 T 14-10-2018 JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 3.5E-13 T 14-10-2018 JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.5E-13 T 14-10-2018 JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 471 1.6E-14 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 286 7.3E-52 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 SUPERFAMILY SSF51905 3 188 2.59E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 560 622 2.9E-11 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 SUPERFAMILY SSF55124 502 628 2.76E-30 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 800 0.0 T 14-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 PRINTS PR00397 Sirohaem Fe-binding site signature 636 654 7.3E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 PRINTS PR00397 Sirohaem Fe-binding site signature 679 697 7.3E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 Gene3D G3DSA:3.50.50.60 7 283 2.7E-80 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 PIRSF PIRSF037149 1 835 0.0 T 14-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 JV59_30450 12d76fc919803b0c824d90307daa3d6d 851 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 768 5.8E-14 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_33530 7887ba1b1685dc339346cc3f101907cf 199 Pfam PF01323 DSBA-like thioredoxin domain 40 184 7.1E-21 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 JV59_33530 7887ba1b1685dc339346cc3f101907cf 199 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 JV59_33530 7887ba1b1685dc339346cc3f101907cf 199 Gene3D G3DSA:3.40.30.10 17 199 2.1E-51 T 14-10-2018 JV59_33530 7887ba1b1685dc339346cc3f101907cf 199 SUPERFAMILY SSF52833 21 197 6.88E-44 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_33530 7887ba1b1685dc339346cc3f101907cf 199 PIRSF PIRSF001488 1 199 2.6E-63 T 14-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL JV59_01940 0dc10c8331560defb037c78dc66c83b7 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 6.9E-32 T 14-10-2018 JV59_01940 0dc10c8331560defb037c78dc66c83b7 455 Gene3D G3DSA:2.40.10.120 37 261 1.4E-84 T 14-10-2018 JV59_01940 0dc10c8331560defb037c78dc66c83b7 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 374 444 4.3E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JV59_01940 0dc10c8331560defb037c78dc66c83b7 455 SUPERFAMILY SSF50156 225 350 4.47E-27 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 JV59_01940 0dc10c8331560defb037c78dc66c83b7 455 Pfam PF13180 PDZ domain 269 358 2.0E-18 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JV59_01940 0dc10c8331560defb037c78dc66c83b7 455 Gene3D G3DSA:2.30.42.10 370 455 3.7E-25 T 14-10-2018 JV59_01940 0dc10c8331560defb037c78dc66c83b7 455 SUPERFAMILY SSF50156 380 454 1.97E-13 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 JV59_01940 0dc10c8331560defb037c78dc66c83b7 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 453 5.9E-167 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 JV59_01940 0dc10c8331560defb037c78dc66c83b7 455 SMART SM00228 267 349 1.3E-16 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JV59_01940 0dc10c8331560defb037c78dc66c83b7 455 SMART SM00228 374 447 1.6E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JV59_01940 0dc10c8331560defb037c78dc66c83b7 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 1.0E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JV59_01940 0dc10c8331560defb037c78dc66c83b7 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 1.0E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JV59_01940 0dc10c8331560defb037c78dc66c83b7 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 1.0E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JV59_01940 0dc10c8331560defb037c78dc66c83b7 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 1.0E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JV59_01940 0dc10c8331560defb037c78dc66c83b7 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 1.0E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JV59_01940 0dc10c8331560defb037c78dc66c83b7 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 1.0E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JV59_01940 0dc10c8331560defb037c78dc66c83b7 455 SUPERFAMILY SSF50494 37 263 1.01E-64 T 14-10-2018 IPR009003 Peptidase S1, PA clan JV59_01940 0dc10c8331560defb037c78dc66c83b7 455 Gene3D G3DSA:2.30.42.10 265 369 9.6E-31 T 14-10-2018 JV59_26930 42df557ffb1868cb989cf004641f2479 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 JV59_26930 42df557ffb1868cb989cf004641f2479 112 PRINTS PR00340 P-II protein signature 52 75 4.0E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JV59_26930 42df557ffb1868cb989cf004641f2479 112 PRINTS PR00340 P-II protein signature 23 41 4.0E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JV59_26930 42df557ffb1868cb989cf004641f2479 112 PRINTS PR00340 P-II protein signature 83 103 4.0E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JV59_26930 42df557ffb1868cb989cf004641f2479 112 PRINTS PR00340 P-II protein signature 2 17 4.0E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JV59_26930 42df557ffb1868cb989cf004641f2479 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.5E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JV59_26930 42df557ffb1868cb989cf004641f2479 112 SMART SM00938 4 105 1.2E-68 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JV59_26930 42df557ffb1868cb989cf004641f2479 112 Gene3D G3DSA:3.30.70.120 1 112 3.3E-48 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JV59_26930 42df557ffb1868cb989cf004641f2479 112 PIRSF PIRSF039144 1 112 5.9E-58 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JV59_26930 42df557ffb1868cb989cf004641f2479 112 SUPERFAMILY SSF54913 1 112 8.58E-47 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta JV59_26930 42df557ffb1868cb989cf004641f2479 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 JV59_01770 8914c48ca60c66e0f510224aab3c05e8 239 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 9 239 51.638 T 14-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 JV59_01770 8914c48ca60c66e0f510224aab3c05e8 239 Gene3D G3DSA:3.40.50.150 7 235 6.4E-54 T 14-10-2018 JV59_01770 8914c48ca60c66e0f510224aab3c05e8 239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 46 60 1.4E-5 T 14-10-2018 JV59_01770 8914c48ca60c66e0f510224aab3c05e8 239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 111 123 1.4E-5 T 14-10-2018 JV59_01770 8914c48ca60c66e0f510224aab3c05e8 239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 141 165 1.4E-5 T 14-10-2018 JV59_01770 8914c48ca60c66e0f510224aab3c05e8 239 Pfam PF05175 Methyltransferase small domain 42 163 2.3E-17 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 JV59_01770 8914c48ca60c66e0f510224aab3c05e8 239 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JV59_01770 8914c48ca60c66e0f510224aab3c05e8 239 SUPERFAMILY SSF53335 9 169 1.05E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_39375 af5941cd4b88f952d967b2b85c42af03 558 Gene3D G3DSA:3.30.450.20 41 154 8.6E-7 T 14-10-2018 JV59_39375 af5941cd4b88f952d967b2b85c42af03 558 SMART SM00267 364 537 1.1E-54 T 14-10-2018 IPR000160 GGDEF domain JV59_39375 af5941cd4b88f952d967b2b85c42af03 558 SUPERFAMILY SSF55781 211 370 1.13E-11 T 14-10-2018 JV59_39375 af5941cd4b88f952d967b2b85c42af03 558 Gene3D G3DSA:3.30.70.270 372 544 4.1E-54 T 14-10-2018 JV59_39375 af5941cd4b88f952d967b2b85c42af03 558 SUPERFAMILY SSF55073 380 539 6.04E-46 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_39375 af5941cd4b88f952d967b2b85c42af03 558 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 372 535 1.6E-51 T 14-10-2018 IPR000160 GGDEF domain JV59_39375 af5941cd4b88f952d967b2b85c42af03 558 Gene3D G3DSA:3.30.450.40 205 371 1.9E-11 T 14-10-2018 IPR029016 GAF-like domain superfamily JV59_39375 af5941cd4b88f952d967b2b85c42af03 558 Pfam PF13492 GAF domain 242 364 2.5E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 JV59_39375 af5941cd4b88f952d967b2b85c42af03 558 SMART SM00065 232 372 0.0041 T 14-10-2018 IPR003018 GAF domain GO:0005515 JV59_39375 af5941cd4b88f952d967b2b85c42af03 558 Pfam PF00990 Diguanylate cyclase, GGDEF domain 376 532 1.8E-45 T 14-10-2018 IPR000160 GGDEF domain JV59_17435 43af80041db23a99fc609dca759cf180 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 286 8.2E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_17435 43af80041db23a99fc609dca759cf180 296 SUPERFAMILY SSF161098 10 296 2.49E-68 T 14-10-2018 IPR035906 MetI-like superfamily JV59_17435 43af80041db23a99fc609dca759cf180 296 Gene3D G3DSA:1.10.3720.10 1 283 1.1E-73 T 14-10-2018 IPR035906 MetI-like superfamily JV59_35220 0a5141a967be1610616dd573c5a01832 352 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 21 350 1.8E-93 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JV59_35220 0a5141a967be1610616dd573c5a01832 352 SUPERFAMILY SSF48029 26 138 1.52E-19 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical JV59_35220 0a5141a967be1610616dd573c5a01832 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 292 318 2.6E-57 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JV59_35220 0a5141a967be1610616dd573c5a01832 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 25 41 2.6E-57 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JV59_35220 0a5141a967be1610616dd573c5a01832 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 54 80 2.6E-57 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JV59_35220 0a5141a967be1610616dd573c5a01832 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 215 240 2.6E-57 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JV59_35220 0a5141a967be1610616dd573c5a01832 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 246 266 2.6E-57 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JV59_35220 0a5141a967be1610616dd573c5a01832 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 268 288 2.6E-57 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JV59_35220 0a5141a967be1610616dd573c5a01832 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 134 157 2.6E-57 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JV59_35220 0a5141a967be1610616dd573c5a01832 352 Pfam PF14841 FliG middle domain 135 207 2.3E-25 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain JV59_35220 0a5141a967be1610616dd573c5a01832 352 SUPERFAMILY SSF48029 134 345 1.83E-66 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical JV59_35220 0a5141a967be1610616dd573c5a01832 352 Pfam PF01706 FliG C-terminal domain 237 344 1.4E-40 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal JV59_35220 0a5141a967be1610616dd573c5a01832 352 Gene3D G3DSA:1.10.220.30 109 213 3.1E-28 T 14-10-2018 JV59_35220 0a5141a967be1610616dd573c5a01832 352 PIRSF PIRSF003161 19 352 2.0E-111 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JV59_35220 0a5141a967be1610616dd573c5a01832 352 Gene3D G3DSA:1.10.220.30 215 352 5.0E-43 T 14-10-2018 JV59_35220 0a5141a967be1610616dd573c5a01832 352 Pfam PF14842 FliG N-terminal domain 26 125 5.3E-27 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain JV59_35220 0a5141a967be1610616dd573c5a01832 352 Gene3D G3DSA:1.10.220.30 20 103 4.3E-16 T 14-10-2018 JV59_23065 dc892d2a72df5a54b063fe1b51c3b63a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.0E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_23065 dc892d2a72df5a54b063fe1b51c3b63a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.0E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_23065 dc892d2a72df5a54b063fe1b51c3b63a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.0E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_23065 dc892d2a72df5a54b063fe1b51c3b63a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.0E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_23065 dc892d2a72df5a54b063fe1b51c3b63a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 4.0E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_23065 dc892d2a72df5a54b063fe1b51c3b63a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.0E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_23065 dc892d2a72df5a54b063fe1b51c3b63a 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 250 4.2E-52 T 14-10-2018 JV59_23065 dc892d2a72df5a54b063fe1b51c3b63a 255 Gene3D G3DSA:3.40.50.720 4 253 5.7E-69 T 14-10-2018 JV59_23065 dc892d2a72df5a54b063fe1b51c3b63a 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_23065 dc892d2a72df5a54b063fe1b51c3b63a 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_23065 dc892d2a72df5a54b063fe1b51c3b63a 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_23065 dc892d2a72df5a54b063fe1b51c3b63a 255 SUPERFAMILY SSF51735 8 252 7.61E-70 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_00145 a62622c9153e20795ba9459f382601f2 302 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 1.3E-25 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain JV59_00145 a62622c9153e20795ba9459f382601f2 302 Pfam PF01545 Cation efflux family 15 206 1.4E-39 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 JV59_00145 a62622c9153e20795ba9459f382601f2 302 SUPERFAMILY SSF161111 8 207 4.45E-49 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily JV59_00145 a62622c9153e20795ba9459f382601f2 302 Gene3D G3DSA:1.20.1510.10 8 206 1.7E-58 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily JV59_00145 a62622c9153e20795ba9459f382601f2 302 SUPERFAMILY SSF160240 210 288 6.93E-24 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 JV59_00145 a62622c9153e20795ba9459f382601f2 302 Gene3D G3DSA:3.30.70.1350 207 290 6.8E-31 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 JV59_00145 a62622c9153e20795ba9459f382601f2 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 287 3.2E-67 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 JV59_39035 a26fcdc3604bfd70f2bf9bdc3e0e2c56 305 SUPERFAMILY SSF102886 5 305 2.35E-137 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 JV59_39035 a26fcdc3604bfd70f2bf9bdc3e0e2c56 305 Gene3D G3DSA:3.40.1500.10 1 305 4.2E-138 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 JV59_39035 a26fcdc3604bfd70f2bf9bdc3e0e2c56 305 Pfam PF01218 Coproporphyrinogen III oxidase 9 305 6.2E-133 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 JV59_39035 a26fcdc3604bfd70f2bf9bdc3e0e2c56 305 PIRSF PIRSF000166 2 305 1.9E-129 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 JV59_39035 a26fcdc3604bfd70f2bf9bdc3e0e2c56 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 281 56.471 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 JV59_39035 a26fcdc3604bfd70f2bf9bdc3e0e2c56 305 PRINTS PR00073 Coprogen oxidase signature 94 118 1.8E-69 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 JV59_39035 a26fcdc3604bfd70f2bf9bdc3e0e2c56 305 PRINTS PR00073 Coprogen oxidase signature 266 292 1.8E-69 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 JV59_39035 a26fcdc3604bfd70f2bf9bdc3e0e2c56 305 PRINTS PR00073 Coprogen oxidase signature 166 195 1.8E-69 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 JV59_39035 a26fcdc3604bfd70f2bf9bdc3e0e2c56 305 PRINTS PR00073 Coprogen oxidase signature 238 265 1.8E-69 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 JV59_39035 a26fcdc3604bfd70f2bf9bdc3e0e2c56 305 PRINTS PR00073 Coprogen oxidase signature 31 47 1.8E-69 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 JV59_39035 a26fcdc3604bfd70f2bf9bdc3e0e2c56 305 PRINTS PR00073 Coprogen oxidase signature 129 151 1.8E-69 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 JV59_39035 a26fcdc3604bfd70f2bf9bdc3e0e2c56 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 170 194 - T 14-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 JV59_32065 9bbb4972753267d76dce2d2d01d4e9b0 169 Pfam PF01863 Protein of unknown function DUF45 94 150 1.4E-11 T 14-10-2018 IPR002725 Protein of unknown function DUF45 JV59_32065 9bbb4972753267d76dce2d2d01d4e9b0 169 Gene3D G3DSA:3.30.2010.10 66 164 6.1E-8 T 14-10-2018 JV59_21280 6dc5b5cc9e17295e33ae3b124174c62f 237 SUPERFAMILY SSF51735 3 215 6.22E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_21280 6dc5b5cc9e17295e33ae3b124174c62f 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.5E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_21280 6dc5b5cc9e17295e33ae3b124174c62f 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.5E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_21280 6dc5b5cc9e17295e33ae3b124174c62f 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.5E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_21280 6dc5b5cc9e17295e33ae3b124174c62f 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.5E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_21280 6dc5b5cc9e17295e33ae3b124174c62f 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.5E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_21280 6dc5b5cc9e17295e33ae3b124174c62f 237 PIRSF PIRSF000126 1 232 1.5E-58 T 14-10-2018 JV59_21280 6dc5b5cc9e17295e33ae3b124174c62f 237 Pfam PF00106 short chain dehydrogenase 3 192 2.0E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_21280 6dc5b5cc9e17295e33ae3b124174c62f 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_21280 6dc5b5cc9e17295e33ae3b124174c62f 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 2.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_21280 6dc5b5cc9e17295e33ae3b124174c62f 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 2.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_21280 6dc5b5cc9e17295e33ae3b124174c62f 237 Gene3D G3DSA:3.40.50.720 1 232 6.9E-58 T 14-10-2018 JV59_21900 e1ade3fdcf093adc59c22200f6abd90e 407 SMART SM00382 54 243 1.7E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_21900 e1ade3fdcf093adc59c22200f6abd90e 407 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_21900 e1ade3fdcf093adc59c22200f6abd90e 407 Gene3D G3DSA:3.10.580.10 274 395 5.4E-8 T 14-10-2018 JV59_21900 e1ade3fdcf093adc59c22200f6abd90e 407 Pfam PF00005 ABC transporter 45 193 1.2E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_21900 e1ade3fdcf093adc59c22200f6abd90e 407 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 38 394 2.2E-123 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 JV59_21900 e1ade3fdcf093adc59c22200f6abd90e 407 Gene3D G3DSA:3.40.50.300 32 270 1.0E-69 T 14-10-2018 JV59_21900 e1ade3fdcf093adc59c22200f6abd90e 407 SUPERFAMILY SSF52540 39 265 4.95E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_21900 e1ade3fdcf093adc59c22200f6abd90e 407 SUPERFAMILY SSF54631 275 397 1.3E-11 T 14-10-2018 JV59_23480 476152648afe9b881a5f52dcb6e11347 355 Gene3D G3DSA:2.40.50.940 222 349 3.2E-12 T 14-10-2018 JV59_23480 476152648afe9b881a5f52dcb6e11347 355 SUPERFAMILY SSF52540 4 243 1.82E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_23480 476152648afe9b881a5f52dcb6e11347 355 Pfam PF00005 ABC transporter 20 161 6.2E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_23480 476152648afe9b881a5f52dcb6e11347 355 SUPERFAMILY SSF50331 237 326 4.82E-7 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal JV59_23480 476152648afe9b881a5f52dcb6e11347 355 Pfam PF08402 TOBE domain 279 329 3.6E-5 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 JV59_23480 476152648afe9b881a5f52dcb6e11347 355 Gene3D G3DSA:2.40.50.140 284 342 3.2E-12 T 14-10-2018 JV59_23480 476152648afe9b881a5f52dcb6e11347 355 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_23480 476152648afe9b881a5f52dcb6e11347 355 SMART SM00382 28 211 3.6E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_23480 476152648afe9b881a5f52dcb6e11347 355 Gene3D G3DSA:3.40.50.300 2 221 1.1E-64 T 14-10-2018 JV59_24305 0412ee78b879fa3c790fb6c496f4d0e0 303 SUPERFAMILY SSF46785 7 115 6.95E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_24305 0412ee78b879fa3c790fb6c496f4d0e0 303 Gene3D G3DSA:3.40.190.10 96 294 8.5E-55 T 14-10-2018 JV59_24305 0412ee78b879fa3c790fb6c496f4d0e0 303 Gene3D G3DSA:1.10.10.10 5 95 1.9E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_24305 0412ee78b879fa3c790fb6c496f4d0e0 303 Gene3D G3DSA:3.40.190.10 166 269 8.5E-55 T 14-10-2018 JV59_24305 0412ee78b879fa3c790fb6c496f4d0e0 303 Pfam PF03466 LysR substrate binding domain 91 298 1.2E-36 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_24305 0412ee78b879fa3c790fb6c496f4d0e0 303 SUPERFAMILY SSF53850 93 298 9.77E-39 T 14-10-2018 JV59_24305 0412ee78b879fa3c790fb6c496f4d0e0 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 2.2E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_38115 45ee1f9b8026bd3252a292025ee683c7 162 Hamap MF_00173 Arginine repressor [argR]. 1 162 42.167 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 JV59_38115 45ee1f9b8026bd3252a292025ee683c7 162 Pfam PF02863 Arginine repressor, C-terminal domain 93 151 1.1E-17 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 JV59_38115 45ee1f9b8026bd3252a292025ee683c7 162 Gene3D G3DSA:1.10.10.10 10 82 1.7E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_38115 45ee1f9b8026bd3252a292025ee683c7 162 Gene3D G3DSA:3.30.1360.40 83 161 1.5E-21 T 14-10-2018 JV59_38115 45ee1f9b8026bd3252a292025ee683c7 162 Pfam PF01316 Arginine repressor, DNA binding domain 18 81 6.6E-15 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 JV59_38115 45ee1f9b8026bd3252a292025ee683c7 162 SUPERFAMILY SSF55252 91 155 1.01E-16 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 JV59_38115 45ee1f9b8026bd3252a292025ee683c7 162 SUPERFAMILY SSF46785 14 82 2.72E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_38115 45ee1f9b8026bd3252a292025ee683c7 162 PRINTS PR01467 Bacterial arginine repressor signature 50 65 1.4E-19 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 JV59_38115 45ee1f9b8026bd3252a292025ee683c7 162 PRINTS PR01467 Bacterial arginine repressor signature 128 143 1.4E-19 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 JV59_38115 45ee1f9b8026bd3252a292025ee683c7 162 PRINTS PR01467 Bacterial arginine repressor signature 98 111 1.4E-19 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 JV59_38115 45ee1f9b8026bd3252a292025ee683c7 162 PRINTS PR01467 Bacterial arginine repressor signature 33 46 1.4E-19 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 JV59_38115 45ee1f9b8026bd3252a292025ee683c7 162 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 97 137 5.0E-14 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 JV59_01030 bd51c72d1076ba83b3b1264723a2ab72 243 PIRSF PIRSF015601 2 242 2.0E-53 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 JV59_01030 bd51c72d1076ba83b3b1264723a2ab72 243 Gene3D G3DSA:2.40.240.20 1 70 1.2E-22 T 14-10-2018 JV59_01030 bd51c72d1076ba83b3b1264723a2ab72 243 Gene3D G3DSA:3.40.1280.10 74 243 5.9E-65 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JV59_01030 bd51c72d1076ba83b3b1264723a2ab72 243 SUPERFAMILY SSF75217 75 242 3.66E-51 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases JV59_01030 bd51c72d1076ba83b3b1264723a2ab72 243 Pfam PF04452 RNA methyltransferase 20 236 5.2E-73 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 JV59_01030 bd51c72d1076ba83b3b1264723a2ab72 243 SUPERFAMILY SSF88697 2 70 7.95E-17 T 14-10-2018 IPR015947 PUA-like superfamily JV59_01030 bd51c72d1076ba83b3b1264723a2ab72 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 2.2E-83 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 JV59_31815 bac7e877eca646a491d89b74cf1a5eec 210 Gene3D G3DSA:3.30.1330.60 71 190 8.8E-28 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_31815 bac7e877eca646a491d89b74cf1a5eec 210 Pfam PF00691 OmpA family 90 185 8.9E-19 T 14-10-2018 IPR006665 OmpA-like domain JV59_31815 bac7e877eca646a491d89b74cf1a5eec 210 PRINTS PR01021 OMPA domain signature 91 113 5.7E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_31815 bac7e877eca646a491d89b74cf1a5eec 210 PRINTS PR01021 OMPA domain signature 121 136 5.7E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_31815 bac7e877eca646a491d89b74cf1a5eec 210 PRINTS PR01021 OMPA domain signature 136 152 5.7E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_31815 bac7e877eca646a491d89b74cf1a5eec 210 SUPERFAMILY SSF103088 61 190 2.22E-28 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_36795 b5934de6f46f52973a6e1287e4139d7c 318 TIGRFAM TIGR00191 thrB: homoserine kinase 3 314 9.5E-110 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 JV59_36795 b5934de6f46f52973a6e1287e4139d7c 318 Hamap MF_00384 Homoserine kinase [thrB]. 5 314 29.14 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 JV59_36795 b5934de6f46f52973a6e1287e4139d7c 318 Pfam PF08544 GHMP kinases C terminal 218 290 4.8E-9 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain JV59_36795 b5934de6f46f52973a6e1287e4139d7c 318 Pfam PF00288 GHMP kinases N terminal domain 90 156 9.8E-14 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 JV59_36795 b5934de6f46f52973a6e1287e4139d7c 318 Gene3D G3DSA:3.30.70.890 174 283 4.7E-90 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily JV59_36795 b5934de6f46f52973a6e1287e4139d7c 318 PIRSF PIRSF000676 1 316 1.7E-78 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 JV59_36795 b5934de6f46f52973a6e1287e4139d7c 318 SUPERFAMILY SSF54211 3 191 3.26E-35 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JV59_36795 b5934de6f46f52973a6e1287e4139d7c 318 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 JV59_36795 b5934de6f46f52973a6e1287e4139d7c 318 Gene3D G3DSA:3.30.230.10 5 173 4.7E-90 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JV59_36795 b5934de6f46f52973a6e1287e4139d7c 318 PRINTS PR00958 Homoserine kinase signature 103 118 3.2E-31 T 14-10-2018 JV59_36795 b5934de6f46f52973a6e1287e4139d7c 318 PRINTS PR00958 Homoserine kinase signature 143 156 3.2E-31 T 14-10-2018 JV59_36795 b5934de6f46f52973a6e1287e4139d7c 318 PRINTS PR00958 Homoserine kinase signature 181 198 3.2E-31 T 14-10-2018 JV59_36795 b5934de6f46f52973a6e1287e4139d7c 318 PRINTS PR00958 Homoserine kinase signature 10 25 3.2E-31 T 14-10-2018 JV59_36795 b5934de6f46f52973a6e1287e4139d7c 318 PRINTS PR00958 Homoserine kinase signature 260 275 3.2E-31 T 14-10-2018 JV59_36795 b5934de6f46f52973a6e1287e4139d7c 318 SUPERFAMILY SSF55060 178 294 2.71E-32 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily JV59_16865 9d8e8cb4fd8f2c0bbca2a2cb87bfcfce 1361 Gene3D G3DSA:3.30.300.30 901 1003 4.5E-28 T 14-10-2018 JV59_16865 9d8e8cb4fd8f2c0bbca2a2cb87bfcfce 1361 Gene3D G3DSA:3.30.559.10 48 414 6.4E-114 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JV59_16865 9d8e8cb4fd8f2c0bbca2a2cb87bfcfce 1361 Pfam PF00668 Condensation domain 44 485 7.0E-94 T 14-10-2018 IPR001242 Condensation domain JV59_16865 9d8e8cb4fd8f2c0bbca2a2cb87bfcfce 1361 SUPERFAMILY SSF47336 1008 1079 4.32E-12 T 14-10-2018 IPR036736 ACP-like superfamily JV59_16865 9d8e8cb4fd8f2c0bbca2a2cb87bfcfce 1361 ProSitePatterns PS00455 Putative AMP-binding domain signature. 648 659 - T 14-10-2018 IPR020845 AMP-binding, conserved site JV59_16865 9d8e8cb4fd8f2c0bbca2a2cb87bfcfce 1361 SUPERFAMILY SSF53474 1083 1358 5.67E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_16865 9d8e8cb4fd8f2c0bbca2a2cb87bfcfce 1361 Pfam PF13193 AMP-binding enzyme C-terminal domain 915 987 3.8E-9 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JV59_16865 9d8e8cb4fd8f2c0bbca2a2cb87bfcfce 1361 Gene3D G3DSA:3.30.559.30 225 470 6.4E-114 T 14-10-2018 JV59_16865 9d8e8cb4fd8f2c0bbca2a2cb87bfcfce 1361 Gene3D G3DSA:1.10.1200.10 1004 1085 2.6E-16 T 14-10-2018 IPR036736 ACP-like superfamily JV59_16865 9d8e8cb4fd8f2c0bbca2a2cb87bfcfce 1361 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 524 931 4.7E-113 T 14-10-2018 IPR010071 Amino acid adenylation domain JV59_16865 9d8e8cb4fd8f2c0bbca2a2cb87bfcfce 1361 Gene3D G3DSA:3.40.50.1820 1086 1358 5.3E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_16865 9d8e8cb4fd8f2c0bbca2a2cb87bfcfce 1361 Pfam PF00501 AMP-binding enzyme 503 907 6.1E-83 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JV59_16865 9d8e8cb4fd8f2c0bbca2a2cb87bfcfce 1361 SUPERFAMILY SSF52777 44 241 3.67E-34 T 14-10-2018 JV59_16865 9d8e8cb4fd8f2c0bbca2a2cb87bfcfce 1361 Pfam PF00975 Thioesterase domain 1104 1345 1.4E-21 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 JV59_16865 9d8e8cb4fd8f2c0bbca2a2cb87bfcfce 1361 SUPERFAMILY SSF56801 463 1025 2.88E-130 T 14-10-2018 JV59_16865 9d8e8cb4fd8f2c0bbca2a2cb87bfcfce 1361 Gene3D G3DSA:3.40.50.12780 490 900 5.2E-114 T 14-10-2018 JV59_16865 9d8e8cb4fd8f2c0bbca2a2cb87bfcfce 1361 Pfam PF00550 Phosphopantetheine attachment site 1015 1077 1.8E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain JV59_16865 9d8e8cb4fd8f2c0bbca2a2cb87bfcfce 1361 SUPERFAMILY SSF52777 227 468 1.22E-54 T 14-10-2018 JV59_17150 6d691b9dc1d2789ef2e6575e92cf0225 607 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 51 90 2.0E-8 T 14-10-2018 IPR011096 FTP domain JV59_17150 6d691b9dc1d2789ef2e6575e92cf0225 607 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 361 372 3.0E-28 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 JV59_17150 6d691b9dc1d2789ef2e6575e92cf0225 607 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 306 326 3.0E-28 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 JV59_17150 6d691b9dc1d2789ef2e6575e92cf0225 607 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 340 356 3.0E-28 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 JV59_17150 6d691b9dc1d2789ef2e6575e92cf0225 607 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 423 439 3.0E-28 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 JV59_17150 6d691b9dc1d2789ef2e6575e92cf0225 607 Gene3D G3DSA:3.10.450.490 19 108 2.3E-5 T 14-10-2018 JV59_17150 6d691b9dc1d2789ef2e6575e92cf0225 607 SUPERFAMILY SSF89260 509 606 1.83E-6 T 14-10-2018 JV59_17150 6d691b9dc1d2789ef2e6575e92cf0225 607 Gene3D G3DSA:3.10.170.10 197 353 1.4E-60 T 14-10-2018 JV59_17150 6d691b9dc1d2789ef2e6575e92cf0225 607 Gene3D G3DSA:1.10.390.10 354 503 1.0E-47 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily JV59_17150 6d691b9dc1d2789ef2e6575e92cf0225 607 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 528 593 3.4E-11 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial JV59_17150 6d691b9dc1d2789ef2e6575e92cf0225 607 Gene3D G3DSA:2.60.120.380 508 607 3.3E-38 T 14-10-2018 JV59_17150 6d691b9dc1d2789ef2e6575e92cf0225 607 Gene3D G3DSA:3.10.450.40 109 194 6.9E-26 T 14-10-2018 JV59_17150 6d691b9dc1d2789ef2e6575e92cf0225 607 SUPERFAMILY SSF55486 199 498 6.04E-85 T 14-10-2018 JV59_17150 6d691b9dc1d2789ef2e6575e92cf0225 607 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 352 496 4.8E-35 T 14-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 JV59_17150 6d691b9dc1d2789ef2e6575e92cf0225 607 Pfam PF03413 Peptidase propeptide and YPEB domain 114 189 7.0E-9 T 14-10-2018 IPR025711 PepSY domain JV59_17150 6d691b9dc1d2789ef2e6575e92cf0225 607 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 206 349 1.6E-36 T 14-10-2018 IPR013856 Peptidase M4 domain GO:0004222 JV59_30025 52e7649dd3c26fd380d9a5fe61061f53 219 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 214 42.93 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JV59_30025 52e7649dd3c26fd380d9a5fe61061f53 219 Gene3D G3DSA:3.90.870.10 1 216 1.5E-90 T 14-10-2018 JV59_30025 52e7649dd3c26fd380d9a5fe61061f53 219 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 210 2.0E-79 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JV59_30025 52e7649dd3c26fd380d9a5fe61061f53 219 SUPERFAMILY SSF55821 9 212 6.18E-85 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily JV59_30025 52e7649dd3c26fd380d9a5fe61061f53 219 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 19 209 6.7E-82 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JV59_40000 e1cdc36babe840ed649dc9a498351cb6 309 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 14 303 54.283 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD JV59_40000 e1cdc36babe840ed649dc9a498351cb6 309 Pfam PF00589 Phage integrase family 121 289 8.4E-48 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JV59_40000 e1cdc36babe840ed649dc9a498351cb6 309 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 18 305 2.5E-108 T 14-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 JV59_40000 e1cdc36babe840ed649dc9a498351cb6 309 SUPERFAMILY SSF56349 16 297 1.03E-51 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JV59_40000 e1cdc36babe840ed649dc9a498351cb6 309 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 16 99 1.0E-20 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 JV59_40000 e1cdc36babe840ed649dc9a498351cb6 309 Gene3D G3DSA:1.10.150.130 13 107 8.8E-18 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal JV59_40000 e1cdc36babe840ed649dc9a498351cb6 309 Gene3D G3DSA:1.10.443.10 120 297 3.5E-55 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JV59_21160 1e692e743b3aa1c40e4ec66dfc5974c0 294 SUPERFAMILY SSF53850 92 292 1.14E-24 T 14-10-2018 JV59_21160 1e692e743b3aa1c40e4ec66dfc5974c0 294 SUPERFAMILY SSF46785 5 84 9.84E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_21160 1e692e743b3aa1c40e4ec66dfc5974c0 294 Gene3D G3DSA:3.40.190.290 92 289 1.7E-33 T 14-10-2018 JV59_21160 1e692e743b3aa1c40e4ec66dfc5974c0 294 Gene3D G3DSA:1.10.10.10 4 89 6.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_21160 1e692e743b3aa1c40e4ec66dfc5974c0 294 Pfam PF03466 LysR substrate binding domain 91 289 7.0E-24 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_21160 1e692e743b3aa1c40e4ec66dfc5974c0 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.9E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_28920 8a9e500effc06e1549bed2e4d7fcb326 298 SUPERFAMILY SSF54913 225 297 2.22E-21 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta JV59_28920 8a9e500effc06e1549bed2e4d7fcb326 298 Gene3D G3DSA:3.30.70.120 225 298 1.0E-33 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JV59_28920 8a9e500effc06e1549bed2e4d7fcb326 298 Gene3D G3DSA:3.40.190.10 6 219 1.3E-67 T 14-10-2018 JV59_28920 8a9e500effc06e1549bed2e4d7fcb326 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.016 T 14-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 JV59_28920 8a9e500effc06e1549bed2e4d7fcb326 298 SUPERFAMILY SSF53850 5 222 3.26E-65 T 14-10-2018 JV59_28920 8a9e500effc06e1549bed2e4d7fcb326 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 204 297 2.3E-30 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 JV59_28920 8a9e500effc06e1549bed2e4d7fcb326 298 Pfam PF08029 HisG, C-terminal domain 222 295 2.9E-24 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 JV59_28920 8a9e500effc06e1549bed2e4d7fcb326 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 1.4E-43 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 JV59_28920 8a9e500effc06e1549bed2e4d7fcb326 298 Gene3D G3DSA:3.40.190.10 102 191 1.3E-67 T 14-10-2018 JV59_28920 8a9e500effc06e1549bed2e4d7fcb326 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 6.5E-53 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 JV59_28920 8a9e500effc06e1549bed2e4d7fcb326 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 14-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 JV59_35540 9f72e47722f31b738890f18759765cb2 180 SUPERFAMILY SSF47598 1 34 2.22E-13 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 JV59_35540 9f72e47722f31b738890f18759765cb2 180 Pfam PF03925 SeqA protein C-terminal domain 71 178 1.6E-45 T 14-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 JV59_35540 9f72e47722f31b738890f18759765cb2 180 SUPERFAMILY SSF82808 66 179 2.75E-48 T 14-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 JV59_35540 9f72e47722f31b738890f18759765cb2 180 Pfam PF17206 SeqA protein N-terminal domain 1 35 1.3E-23 T 14-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal JV59_35540 9f72e47722f31b738890f18759765cb2 180 Gene3D G3DSA:1.10.1220.10 1 41 8.9E-24 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 JV59_35540 9f72e47722f31b738890f18759765cb2 180 Gene3D G3DSA:1.20.1380.10 65 180 5.4E-47 T 14-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 JV59_35540 9f72e47722f31b738890f18759765cb2 180 PIRSF PIRSF019401 1 180 1.1E-54 T 14-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 JV59_35540 9f72e47722f31b738890f18759765cb2 180 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 180 41.918 T 14-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 JV59_16165 ee6722480705f11f1d9a1fd6b7edc740 291 Gene3D G3DSA:1.10.10.10 1 91 1.4E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_16165 ee6722480705f11f1d9a1fd6b7edc740 291 SUPERFAMILY SSF46785 3 81 6.77E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_16165 ee6722480705f11f1d9a1fd6b7edc740 291 Pfam PF03466 LysR substrate binding domain 87 281 3.1E-19 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_16165 ee6722480705f11f1d9a1fd6b7edc740 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_16165 ee6722480705f11f1d9a1fd6b7edc740 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 8.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_16165 ee6722480705f11f1d9a1fd6b7edc740 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 8.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_16165 ee6722480705f11f1d9a1fd6b7edc740 291 Gene3D G3DSA:3.40.190.10 158 252 1.1E-37 T 14-10-2018 JV59_16165 ee6722480705f11f1d9a1fd6b7edc740 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 4.6E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_16165 ee6722480705f11f1d9a1fd6b7edc740 291 SUPERFAMILY SSF53850 90 284 4.71E-24 T 14-10-2018 JV59_16165 ee6722480705f11f1d9a1fd6b7edc740 291 Gene3D G3DSA:3.40.190.10 98 277 1.1E-37 T 14-10-2018 JV59_21105 193503f07fa27e6c94be8c7dd3631914 412 Gene3D G3DSA:2.40.170.10 23 412 1.6E-109 T 14-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 JV59_21105 193503f07fa27e6c94be8c7dd3631914 412 Pfam PF02264 LamB porin 25 412 1.9E-98 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 JV59_21105 193503f07fa27e6c94be8c7dd3631914 412 SUPERFAMILY SSF56935 23 412 3.85E-106 T 14-10-2018 JV59_21105 193503f07fa27e6c94be8c7dd3631914 412 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 30 395 1.0E-162 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 JV59_24750 9cd662c573bf16518a36e2b00eb12534 690 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 38 683 1.6E-254 T 14-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 JV59_24750 9cd662c573bf16518a36e2b00eb12534 690 Gene3D G3DSA:3.40.50.300 437 689 1.9E-91 T 14-10-2018 JV59_24750 9cd662c573bf16518a36e2b00eb12534 690 Pfam PF03412 Peptidase C39 family 24 108 2.2E-5 T 14-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 JV59_24750 9cd662c573bf16518a36e2b00eb12534 690 SUPERFAMILY SSF52540 437 682 3.73E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_24750 9cd662c573bf16518a36e2b00eb12534 690 Pfam PF00005 ABC transporter 463 612 1.9E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_24750 9cd662c573bf16518a36e2b00eb12534 690 Pfam PF00664 ABC transporter transmembrane region 134 400 4.1E-48 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JV59_24750 9cd662c573bf16518a36e2b00eb12534 690 ProSitePatterns PS00211 ABC transporters family signature. 584 598 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_24750 9cd662c573bf16518a36e2b00eb12534 690 Gene3D G3DSA:3.90.70.10 8 113 1.1E-11 T 14-10-2018 JV59_24750 9cd662c573bf16518a36e2b00eb12534 690 SUPERFAMILY SSF90123 119 430 3.66E-67 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_24750 9cd662c573bf16518a36e2b00eb12534 690 Gene3D G3DSA:1.20.1560.10 118 433 1.5E-74 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_24750 9cd662c573bf16518a36e2b00eb12534 690 SMART SM00382 472 672 2.5E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_25590 2cf10ebc8fc2a5efb2aaada66526a162 561 SMART SM00387 449 560 1.3E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_25590 2cf10ebc8fc2a5efb2aaada66526a162 561 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 452 558 3.7E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_25590 2cf10ebc8fc2a5efb2aaada66526a162 561 SUPERFAMILY SSF55781 120 273 4.42E-5 T 14-10-2018 JV59_25590 2cf10ebc8fc2a5efb2aaada66526a162 561 PRINTS PR00344 Bacterial sensor protein C-terminal signature 544 557 9.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_25590 2cf10ebc8fc2a5efb2aaada66526a162 561 PRINTS PR00344 Bacterial sensor protein C-terminal signature 520 538 9.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_25590 2cf10ebc8fc2a5efb2aaada66526a162 561 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 503 9.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_25590 2cf10ebc8fc2a5efb2aaada66526a162 561 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 517 9.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_25590 2cf10ebc8fc2a5efb2aaada66526a162 561 Gene3D G3DSA:1.10.287.130 280 403 3.5E-19 T 14-10-2018 JV59_25590 2cf10ebc8fc2a5efb2aaada66526a162 561 Gene3D G3DSA:3.30.565.10 410 561 1.3E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_25590 2cf10ebc8fc2a5efb2aaada66526a162 561 SUPERFAMILY SSF47384 299 334 9.22E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_25590 2cf10ebc8fc2a5efb2aaada66526a162 561 SUPERFAMILY SSF55874 404 558 3.41E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_25590 2cf10ebc8fc2a5efb2aaada66526a162 561 Pfam PF00512 His Kinase A (phospho-acceptor) domain 304 404 1.8E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_33835 690323fc1e73789e8bbbe49cf331e32d 176 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 164 4.3E-46 T 14-10-2018 IPR018639 Domain of unknown function DUF2062 JV59_34680 f73a307606b649ad6f916f4ed21b1dc9 232 SMART SM00934 5 226 4.1E-100 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JV59_34680 f73a307606b649ad6f916f4ed21b1dc9 232 Gene3D G3DSA:3.20.20.70 2 230 1.3E-85 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_34680 f73a307606b649ad6f916f4ed21b1dc9 232 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JV59_34680 f73a307606b649ad6f916f4ed21b1dc9 232 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 39.946 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JV59_34680 f73a307606b649ad6f916f4ed21b1dc9 232 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 225 4.2E-57 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JV59_34680 f73a307606b649ad6f916f4ed21b1dc9 232 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 222 1.2E-49 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JV59_34680 f73a307606b649ad6f916f4ed21b1dc9 232 SUPERFAMILY SSF51366 1 228 1.44E-76 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 JV59_33090 9dc97d1614a22861327908ae4cd01cd0 463 Gene3D G3DSA:1.10.10.10 1 68 8.4E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_33090 9dc97d1614a22861327908ae4cd01cd0 463 Gene3D G3DSA:3.40.640.10 137 356 4.6E-99 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_33090 9dc97d1614a22861327908ae4cd01cd0 463 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 2.3E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_33090 9dc97d1614a22861327908ae4cd01cd0 463 Gene3D G3DSA:3.90.1150.10 102 461 4.6E-99 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_33090 9dc97d1614a22861327908ae4cd01cd0 463 Pfam PF00155 Aminotransferase class I and II 142 450 1.3E-33 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JV59_33090 9dc97d1614a22861327908ae4cd01cd0 463 SMART SM00345 7 66 4.2E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_33090 9dc97d1614a22861327908ae4cd01cd0 463 SUPERFAMILY SSF46785 1 69 5.94E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_33090 9dc97d1614a22861327908ae4cd01cd0 463 SUPERFAMILY SSF53383 91 461 2.82E-91 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_37730 8ff1caaa2d6883f782f8caa21871706c 574 SUPERFAMILY SSF116726 206 283 4.97E-17 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JV59_37730 8ff1caaa2d6883f782f8caa21871706c 574 Pfam PF02080 TrkA-C domain 209 278 7.4E-13 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JV59_37730 8ff1caaa2d6883f782f8caa21871706c 574 Pfam PF02080 TrkA-C domain 293 349 1.1E-10 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JV59_37730 8ff1caaa2d6883f782f8caa21871706c 574 Gene3D G3DSA:3.30.70.1450 206 285 1.0E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JV59_37730 8ff1caaa2d6883f782f8caa21871706c 574 Gene3D G3DSA:3.30.70.1450 289 361 3.8E-12 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JV59_37730 8ff1caaa2d6883f782f8caa21871706c 574 SUPERFAMILY SSF116726 289 349 1.24E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JV59_37730 8ff1caaa2d6883f782f8caa21871706c 574 Pfam PF03600 Citrate transporter 32 518 1.3E-26 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 JV59_02070 449717d8b62f4edd14591fc46a4e7bb2 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.142 T 14-10-2018 IPR020823 Cell division protein FtsA JV59_02070 449717d8b62f4edd14591fc46a4e7bb2 420 PIRSF PIRSF003101 1 420 3.5E-145 T 14-10-2018 IPR020823 Cell division protein FtsA JV59_02070 449717d8b62f4edd14591fc46a4e7bb2 420 Gene3D G3DSA:3.30.1490.110 87 169 4.8E-111 T 14-10-2018 JV59_02070 449717d8b62f4edd14591fc46a4e7bb2 420 Gene3D G3DSA:3.30.420.40 197 359 4.8E-111 T 14-10-2018 JV59_02070 449717d8b62f4edd14591fc46a4e7bb2 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.4E-149 T 14-10-2018 IPR020823 Cell division protein FtsA JV59_02070 449717d8b62f4edd14591fc46a4e7bb2 420 SUPERFAMILY SSF53067 8 221 5.18E-59 T 14-10-2018 JV59_02070 449717d8b62f4edd14591fc46a4e7bb2 420 SMART SM00842 10 196 7.4E-95 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 JV59_02070 449717d8b62f4edd14591fc46a4e7bb2 420 SUPERFAMILY SSF53067 198 384 9.91E-45 T 14-10-2018 JV59_02070 449717d8b62f4edd14591fc46a4e7bb2 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 5.1E-28 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 JV59_02070 449717d8b62f4edd14591fc46a4e7bb2 420 Pfam PF14450 Cell division protein FtsA 11 180 1.3E-7 T 14-10-2018 JV59_02070 449717d8b62f4edd14591fc46a4e7bb2 420 Gene3D G3DSA:3.90.640.10 235 300 4.8E-111 T 14-10-2018 JV59_02070 449717d8b62f4edd14591fc46a4e7bb2 420 Gene3D G3DSA:3.30.420.40 13 379 4.8E-111 T 14-10-2018 JV59_02070 449717d8b62f4edd14591fc46a4e7bb2 420 Pfam PF14450 Cell division protein FtsA 207 381 2.8E-24 T 14-10-2018 JV59_18935 5f9d92a3cd7f7ea43131bd5d53916c5c 958 Gene3D G3DSA:1.20.120.160 845 958 3.1E-20 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_18935 5f9d92a3cd7f7ea43131bd5d53916c5c 958 SMART SM00073 860 957 8.6E-4 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 JV59_18935 5f9d92a3cd7f7ea43131bd5d53916c5c 958 SUPERFAMILY SSF52172 711 837 2.85E-33 T 14-10-2018 IPR011006 CheY-like superfamily JV59_18935 5f9d92a3cd7f7ea43131bd5d53916c5c 958 SUPERFAMILY SSF55874 523 694 1.44E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_18935 5f9d92a3cd7f7ea43131bd5d53916c5c 958 SMART SM00388 469 534 4.5E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_18935 5f9d92a3cd7f7ea43131bd5d53916c5c 958 PIRSF PIRSF036437 1 958 0.0 T 14-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 JV59_18935 5f9d92a3cd7f7ea43131bd5d53916c5c 958 Pfam PF00072 Response regulator receiver domain 713 825 6.6E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_18935 5f9d92a3cd7f7ea43131bd5d53916c5c 958 Pfam PF00512 His Kinase A (phospho-acceptor) domain 470 534 8.1E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_18935 5f9d92a3cd7f7ea43131bd5d53916c5c 958 Gene3D G3DSA:1.10.287.130 399 532 2.1E-24 T 14-10-2018 JV59_18935 5f9d92a3cd7f7ea43131bd5d53916c5c 958 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 693 2.5E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_18935 5f9d92a3cd7f7ea43131bd5d53916c5c 958 SMART SM00387 581 694 2.0E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_18935 5f9d92a3cd7f7ea43131bd5d53916c5c 958 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 648 2.8E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_18935 5f9d92a3cd7f7ea43131bd5d53916c5c 958 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 672 2.8E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_18935 5f9d92a3cd7f7ea43131bd5d53916c5c 958 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 691 2.8E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_18935 5f9d92a3cd7f7ea43131bd5d53916c5c 958 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 634 2.8E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_18935 5f9d92a3cd7f7ea43131bd5d53916c5c 958 SMART SM00448 711 824 1.2E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_18935 5f9d92a3cd7f7ea43131bd5d53916c5c 958 Gene3D G3DSA:3.40.50.2300 707 841 1.4E-32 T 14-10-2018 JV59_18935 5f9d92a3cd7f7ea43131bd5d53916c5c 958 Pfam PF01627 Hpt domain 872 946 4.5E-12 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 JV59_18935 5f9d92a3cd7f7ea43131bd5d53916c5c 958 SUPERFAMILY SSF47384 457 535 6.08E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_18935 5f9d92a3cd7f7ea43131bd5d53916c5c 958 Gene3D G3DSA:1.20.58.920 181 322 1.5E-51 T 14-10-2018 IPR038188 TorS, sensor domain superfamily JV59_18935 5f9d92a3cd7f7ea43131bd5d53916c5c 958 Gene3D G3DSA:1.20.58.920 47 180 1.5E-42 T 14-10-2018 IPR038188 TorS, sensor domain superfamily JV59_18935 5f9d92a3cd7f7ea43131bd5d53916c5c 958 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 120 1.1E-6 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain JV59_18935 5f9d92a3cd7f7ea43131bd5d53916c5c 958 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 7 955 0.0 T 14-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 JV59_18935 5f9d92a3cd7f7ea43131bd5d53916c5c 958 SUPERFAMILY SSF47226 848 957 8.24E-21 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_18935 5f9d92a3cd7f7ea43131bd5d53916c5c 958 Gene3D G3DSA:3.30.565.10 533 698 6.4E-51 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_40160 ace6bb1d04b40c62d00c5d80efc9617d 826 PIRSF PIRSF500064 17 826 0.0 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 JV59_40160 ace6bb1d04b40c62d00c5d80efc9617d 826 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 29 824 31.643 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 JV59_40160 ace6bb1d04b40c62d00c5d80efc9617d 826 SUPERFAMILY SSF69593 251 506 1.03E-26 T 14-10-2018 JV59_40160 ace6bb1d04b40c62d00c5d80efc9617d 826 PIRSF PIRSF000437 35 826 0.0 T 14-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 JV59_40160 ace6bb1d04b40c62d00c5d80efc9617d 826 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 27 816 0.0 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 JV59_40160 ace6bb1d04b40c62d00c5d80efc9617d 826 Pfam PF01553 Acyltransferase 302 440 4.9E-23 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JV59_40160 ace6bb1d04b40c62d00c5d80efc9617d 826 SMART SM00563 316 443 8.4E-26 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JV59_36555 714662641762037a8291e41fee381bd7 98 PIRSF PIRSF003196 1 98 2.2E-38 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 JV59_36555 714662641762037a8291e41fee381bd7 98 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 4 78 7.0E-32 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 JV59_36555 714662641762037a8291e41fee381bd7 98 TIGRFAM TIGR01321 TrpR: trp operon repressor 6 83 1.2E-26 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 JV59_36555 714662641762037a8291e41fee381bd7 98 Hamap MF_00475 Trp operon repressor [trpR]. 6 98 21.7 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 JV59_36555 714662641762037a8291e41fee381bd7 98 Pfam PF01371 Trp repressor protein 9 92 7.2E-32 T 14-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 JV59_36555 714662641762037a8291e41fee381bd7 98 Gene3D G3DSA:1.10.1270.10 1 97 2.1E-33 T 14-10-2018 IPR038116 TrpR-like superfamily JV59_36555 714662641762037a8291e41fee381bd7 98 SUPERFAMILY SSF48295 2 94 1.15E-28 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 JV59_27180 d7e2b21f96886adb13c4740ca4b98feb 284 Pfam PF14559 Tetratricopeptide repeat 125 190 1.7E-15 T 14-10-2018 JV59_27180 d7e2b21f96886adb13c4740ca4b98feb 284 Gene3D G3DSA:3.40.30.10 1 111 1.8E-23 T 14-10-2018 JV59_27180 d7e2b21f96886adb13c4740ca4b98feb 284 SUPERFAMILY SSF48452 115 246 7.09E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_27180 d7e2b21f96886adb13c4740ca4b98feb 284 SUPERFAMILY SSF52833 3 111 6.59E-26 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_27180 d7e2b21f96886adb13c4740ca4b98feb 284 Gene3D G3DSA:1.25.40.10 197 284 1.4E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_27180 d7e2b21f96886adb13c4740ca4b98feb 284 Pfam PF14561 Tetratricopeptide repeat 195 284 4.9E-27 T 14-10-2018 JV59_27180 d7e2b21f96886adb13c4740ca4b98feb 284 Gene3D G3DSA:1.25.40.10 112 196 4.4E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_27180 d7e2b21f96886adb13c4740ca4b98feb 284 Pfam PF00085 Thioredoxin 6 109 2.4E-16 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 JV59_16665 35f9af994eb50fe0362def757a584ccb 69 Gene3D G3DSA:2.40.50.140 4 67 4.4E-29 T 14-10-2018 JV59_16665 35f9af994eb50fe0362def757a584ccb 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 67 2.6E-29 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JV59_16665 35f9af994eb50fe0362def757a584ccb 69 PIRSF PIRSF002599 1 69 3.7E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 JV59_16665 35f9af994eb50fe0362def757a584ccb 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 14-10-2018 IPR019844 Cold-shock conserved site JV59_16665 35f9af994eb50fe0362def757a584ccb 69 SMART SM00357 6 69 5.6E-31 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 JV59_16665 35f9af994eb50fe0362def757a584ccb 69 SUPERFAMILY SSF50249 3 68 1.37E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_16665 35f9af994eb50fe0362def757a584ccb 69 PRINTS PR00050 Cold shock protein signature 42 60 2.5E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JV59_16665 35f9af994eb50fe0362def757a584ccb 69 PRINTS PR00050 Cold shock protein signature 7 22 2.5E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JV59_16665 35f9af994eb50fe0362def757a584ccb 69 PRINTS PR00050 Cold shock protein signature 27 36 2.5E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JV59_37735 7cf522ae06d5fa77d829f567c306bd7f 470 Pfam PF00009 Elongation factor Tu GTP binding domain 26 219 3.8E-45 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_37735 7cf522ae06d5fa77d829f567c306bd7f 470 SUPERFAMILY SSF52540 22 250 2.56E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_37735 7cf522ae06d5fa77d829f567c306bd7f 470 SUPERFAMILY SSF50447 242 324 2.03E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JV59_37735 7cf522ae06d5fa77d829f567c306bd7f 470 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site JV59_37735 7cf522ae06d5fa77d829f567c306bd7f 470 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 217 5.5E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JV59_37735 7cf522ae06d5fa77d829f567c306bd7f 470 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 6.9E-199 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 JV59_37735 7cf522ae06d5fa77d829f567c306bd7f 470 PRINTS PR00315 GTP-binding elongation factor signature 89 97 6.5E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_37735 7cf522ae06d5fa77d829f567c306bd7f 470 PRINTS PR00315 GTP-binding elongation factor signature 109 119 6.5E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_37735 7cf522ae06d5fa77d829f567c306bd7f 470 PRINTS PR00315 GTP-binding elongation factor signature 28 41 6.5E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_37735 7cf522ae06d5fa77d829f567c306bd7f 470 PRINTS PR00315 GTP-binding elongation factor signature 125 136 6.5E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_37735 7cf522ae06d5fa77d829f567c306bd7f 470 PRINTS PR00315 GTP-binding elongation factor signature 162 171 6.5E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_37735 7cf522ae06d5fa77d829f567c306bd7f 470 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 468 52.978 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 JV59_37735 7cf522ae06d5fa77d829f567c306bd7f 470 Gene3D G3DSA:2.40.30.10 241 327 9.9E-27 T 14-10-2018 JV59_37735 7cf522ae06d5fa77d829f567c306bd7f 470 Gene3D G3DSA:3.40.50.300 6 239 5.9E-71 T 14-10-2018 JV59_37735 7cf522ae06d5fa77d829f567c306bd7f 470 Gene3D G3DSA:2.40.30.10 331 433 2.8E-28 T 14-10-2018 JV59_37735 7cf522ae06d5fa77d829f567c306bd7f 470 SUPERFAMILY SSF50465 332 434 6.47E-29 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal JV59_39385 9e56aeb336e129318d3c75a44151fe94 723 SUPERFAMILY SSF52096 2 305 3.02E-67 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JV59_39385 9e56aeb336e129318d3c75a44151fe94 723 Gene3D G3DSA:3.40.50.720 314 497 1.7E-64 T 14-10-2018 JV59_39385 9e56aeb336e129318d3c75a44151fe94 723 Gene3D G3DSA:3.90.226.10 1 312 2.5E-90 T 14-10-2018 JV59_39385 9e56aeb336e129318d3c75a44151fe94 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 2.9E-58 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 JV59_39385 9e56aeb336e129318d3c75a44151fe94 723 SUPERFAMILY SSF48179 496 604 2.64E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JV59_39385 9e56aeb336e129318d3c75a44151fe94 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 217 1.6E-38 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JV59_39385 9e56aeb336e129318d3c75a44151fe94 723 SUPERFAMILY SSF51735 315 496 4.98E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_39385 9e56aeb336e129318d3c75a44151fe94 723 SUPERFAMILY SSF48179 625 715 6.97E-25 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JV59_39385 9e56aeb336e129318d3c75a44151fe94 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 52.012 T 14-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 JV59_39385 9e56aeb336e129318d3c75a44151fe94 723 Gene3D G3DSA:1.10.1040.50 498 710 1.3E-73 T 14-10-2018 JV59_39385 9e56aeb336e129318d3c75a44151fe94 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 JV59_39385 9e56aeb336e129318d3c75a44151fe94 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 711 7.0E-6 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 JV59_39385 9e56aeb336e129318d3c75a44151fe94 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 2.1E-25 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 JV59_39385 9e56aeb336e129318d3c75a44151fe94 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 14-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 JV59_38095 11a0d3cff43986ff31c5fc75e4b2b7b7 406 Gene3D G3DSA:3.75.10.10 6 403 8.9E-147 T 14-10-2018 JV59_38095 11a0d3cff43986ff31c5fc75e4b2b7b7 406 Gene3D G3DSA:1.10.3930.10 68 148 8.9E-147 T 14-10-2018 JV59_38095 11a0d3cff43986ff31c5fc75e4b2b7b7 406 TIGRFAM TIGR01078 arcA: arginine deiminase 4 406 3.2E-160 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JV59_38095 11a0d3cff43986ff31c5fc75e4b2b7b7 406 Pfam PF02274 Amidinotransferase 18 403 1.3E-109 T 14-10-2018 JV59_38095 11a0d3cff43986ff31c5fc75e4b2b7b7 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 43.497 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JV59_38095 11a0d3cff43986ff31c5fc75e4b2b7b7 406 PIRSF PIRSF006356 1 406 1.4E-150 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JV59_38095 11a0d3cff43986ff31c5fc75e4b2b7b7 406 SUPERFAMILY SSF55909 3 406 1.51E-129 T 14-10-2018 JV59_38095 11a0d3cff43986ff31c5fc75e4b2b7b7 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 7.9E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JV59_38095 11a0d3cff43986ff31c5fc75e4b2b7b7 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 7.9E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JV59_38095 11a0d3cff43986ff31c5fc75e4b2b7b7 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 7.9E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JV59_38095 11a0d3cff43986ff31c5fc75e4b2b7b7 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 7.9E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JV59_38095 11a0d3cff43986ff31c5fc75e4b2b7b7 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 7.9E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JV59_38095 11a0d3cff43986ff31c5fc75e4b2b7b7 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 7.9E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 JV59_01740 a80fca9afd308ee8127d28494cbcc1ef 446 Gene3D G3DSA:3.40.120.10 4 155 1.2E-48 T 14-10-2018 JV59_01740 a80fca9afd308ee8127d28494cbcc1ef 446 Gene3D G3DSA:3.40.120.10 258 340 6.4E-62 T 14-10-2018 JV59_01740 a80fca9afd308ee8127d28494cbcc1ef 446 SUPERFAMILY SSF53738 4 182 2.94E-48 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_01740 a80fca9afd308ee8127d28494cbcc1ef 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 368 1.2E-30 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_01740 a80fca9afd308ee8127d28494cbcc1ef 446 SUPERFAMILY SSF53738 259 366 3.34E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_01740 a80fca9afd308ee8127d28494cbcc1ef 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 2.7E-18 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_01740 a80fca9afd308ee8127d28494cbcc1ef 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 445 46.749 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_01740 a80fca9afd308ee8127d28494cbcc1ef 446 Gene3D G3DSA:3.40.120.10 175 363 6.4E-62 T 14-10-2018 JV59_01740 a80fca9afd308ee8127d28494cbcc1ef 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 136 1.4E-45 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_01740 a80fca9afd308ee8127d28494cbcc1ef 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 443 2.7E-202 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_01740 a80fca9afd308ee8127d28494cbcc1ef 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 385 442 7.9E-12 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_01740 a80fca9afd308ee8127d28494cbcc1ef 446 SUPERFAMILY SSF53738 157 257 4.71E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_01740 a80fca9afd308ee8127d28494cbcc1ef 446 SUPERFAMILY SSF55957 358 444 9.68E-22 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_01740 a80fca9afd308ee8127d28494cbcc1ef 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_01740 a80fca9afd308ee8127d28494cbcc1ef 446 Gene3D G3DSA:3.30.310.50 371 446 2.3E-24 T 14-10-2018 JV59_01740 a80fca9afd308ee8127d28494cbcc1ef 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 5.4E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_01740 a80fca9afd308ee8127d28494cbcc1ef 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 5.4E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_01740 a80fca9afd308ee8127d28494cbcc1ef 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 5.4E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_39075 3a9f4d2dc359e3c605268023c91edbbf 315 SUPERFAMILY SSF53328 3 207 5.49E-67 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JV59_39075 3a9f4d2dc359e3c605268023c91edbbf 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 311 6.6E-109 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 JV59_39075 3a9f4d2dc359e3c605268023c91edbbf 315 Gene3D G3DSA:3.40.50.170 1 209 3.2E-88 T 14-10-2018 JV59_39075 3a9f4d2dc359e3c605268023c91edbbf 315 Gene3D G3DSA:3.10.25.10 210 314 1.1E-37 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JV59_39075 3a9f4d2dc359e3c605268023c91edbbf 315 Pfam PF00551 Formyl transferase 6 183 2.8E-47 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JV59_39075 3a9f4d2dc359e3c605268023c91edbbf 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 315 36.644 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 JV59_39075 3a9f4d2dc359e3c605268023c91edbbf 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 7.0E-29 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JV59_39075 3a9f4d2dc359e3c605268023c91edbbf 315 SUPERFAMILY SSF50486 208 310 7.85E-32 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 JV59_39075 3a9f4d2dc359e3c605268023c91edbbf 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JV59_01490 1523157c6749028f3e3088c33e6cfc7e 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 66 2.8E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_01490 1523157c6749028f3e3088c33e6cfc7e 201 SUPERFAMILY SSF46689 8 83 9.48E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_01490 1523157c6749028f3e3088c33e6cfc7e 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 7.2E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_01490 1523157c6749028f3e3088c33e6cfc7e 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 7.2E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_01490 1523157c6749028f3e3088c33e6cfc7e 201 SUPERFAMILY SSF48498 89 197 2.97E-12 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JV59_01490 1523157c6749028f3e3088c33e6cfc7e 201 Gene3D G3DSA:1.10.357.10 1 201 2.0E-85 T 14-10-2018 JV59_37475 b6d3489f42c54d37707a5f9c438b3f18 187 PIRSF PIRSF028513 2 185 5.3E-30 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 JV59_37475 b6d3489f42c54d37707a5f9c438b3f18 187 Gene3D G3DSA:2.60.450.10 59 186 4.1E-38 T 14-10-2018 JV59_37475 b6d3489f42c54d37707a5f9c438b3f18 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 23.547 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 JV59_37475 b6d3489f42c54d37707a5f9c438b3f18 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 6 182 1.8E-47 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 JV59_37475 b6d3489f42c54d37707a5f9c438b3f18 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 183 1.2E-44 T 14-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related JV59_27635 7bf43928f1ac5896a2652615254e153d 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 4.8E-91 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 JV59_27635 7bf43928f1ac5896a2652615254e153d 193 PIRSF PIRSF006102 1 193 1.1E-64 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 JV59_27635 7bf43928f1ac5896a2652615254e153d 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.44 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 JV59_27635 7bf43928f1ac5896a2652615254e153d 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 4.1E-62 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 JV59_38340 bfface9ec3826924cf3431680984e97d 444 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 135 5.8E-7 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JV59_38340 bfface9ec3826924cf3431680984e97d 444 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 444 43.145 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 JV59_38340 bfface9ec3826924cf3431680984e97d 444 SUPERFAMILY SSF52540 3 441 1.99E-93 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_38340 bfface9ec3826924cf3431680984e97d 444 SMART SM00382 49 333 4.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_38340 bfface9ec3826924cf3431680984e97d 444 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 336 405 4.8E-5 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JV59_38340 bfface9ec3826924cf3431680984e97d 444 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 444 7.6E-223 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 JV59_38340 bfface9ec3826924cf3431680984e97d 444 Gene3D G3DSA:1.10.8.60 336 441 1.2E-39 T 14-10-2018 JV59_38340 bfface9ec3826924cf3431680984e97d 444 SMART SM01086 336 430 7.9E-21 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JV59_38340 bfface9ec3826924cf3431680984e97d 444 Pfam PF07724 AAA domain (Cdc48 subfamily) 175 330 6.6E-43 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JV59_18805 bb37db2ed09e58b81719c6f9a376cc1c 168 Pfam PF13302 Acetyltransferase (GNAT) domain 3 142 5.3E-16 T 14-10-2018 IPR000182 GNAT domain JV59_18805 bb37db2ed09e58b81719c6f9a376cc1c 168 Gene3D G3DSA:3.40.630.30 1 166 1.3E-28 T 14-10-2018 JV59_18805 bb37db2ed09e58b81719c6f9a376cc1c 168 SUPERFAMILY SSF55729 1 165 5.8E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_31845 12f07b55270a55ccc827469bf60b6a38 625 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 14-10-2018 IPR020845 AMP-binding, conserved site JV59_31845 12f07b55270a55ccc827469bf60b6a38 625 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 589 1.9E-25 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JV59_31845 12f07b55270a55ccc827469bf60b6a38 625 Pfam PF00501 AMP-binding enzyme 66 501 1.1E-84 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JV59_31845 12f07b55270a55ccc827469bf60b6a38 625 Gene3D G3DSA:3.40.50.12780 32 494 1.7E-103 T 14-10-2018 JV59_31845 12f07b55270a55ccc827469bf60b6a38 625 SUPERFAMILY SSF56801 3 619 2.75E-155 T 14-10-2018 JV59_31845 12f07b55270a55ccc827469bf60b6a38 625 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 56 4.0E-13 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 JV59_31845 12f07b55270a55ccc827469bf60b6a38 625 Gene3D G3DSA:3.30.300.30 497 625 7.0E-25 T 14-10-2018 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Gene3D G3DSA:3.30.559.30 1677 1928 3.1E-100 T 14-10-2018 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Gene3D G3DSA:3.30.300.30 860 965 2.7E-30 T 14-10-2018 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Gene3D G3DSA:3.30.300.30 3418 3521 1.6E-32 T 14-10-2018 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 SUPERFAMILY SSF52777 2740 2987 4.0E-47 T 14-10-2018 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Gene3D G3DSA:3.40.50.1820 3522 3619 2.2E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 SUPERFAMILY SSF56801 1915 2483 1.83E-134 T 14-10-2018 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 SUPERFAMILY SSF52777 1233 1465 1.22E-16 T 14-10-2018 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 SUPERFAMILY SSF52777 18 186 3.45E-27 T 14-10-2018 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 SMART SM00823 Phosphopantetheine attachment site 3530 3599 0.012 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 SMART SM00823 Phosphopantetheine attachment site 974 1042 0.0033 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 SMART SM00823 Phosphopantetheine attachment site 2471 2540 0.34 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Gene3D G3DSA:3.30.559.10 11 199 1.4E-30 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2104 2115 - T 14-10-2018 IPR020845 AMP-binding, conserved site JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3163 3174 - T 14-10-2018 IPR020845 AMP-binding, conserved site JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 SUPERFAMILY SSF47336 2463 2533 2.49E-14 T 14-10-2018 IPR036736 ACP-like superfamily JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Gene3D G3DSA:1.10.1200.10 2458 2542 1.4E-20 T 14-10-2018 IPR036736 ACP-like superfamily JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 SUPERFAMILY SSF56801 3016 3542 1.7E-154 T 14-10-2018 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Gene3D G3DSA:3.30.559.10 2556 2927 2.1E-113 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 SUPERFAMILY SSF52777 2558 2733 6.11E-40 T 14-10-2018 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Pfam PF00668 Condensation domain 1498 1932 3.1E-76 T 14-10-2018 IPR001242 Condensation domain JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Pfam PF00668 Condensation domain 17 434 7.1E-55 T 14-10-2018 IPR001242 Condensation domain JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Pfam PF00668 Condensation domain 1053 1468 2.1E-27 T 14-10-2018 IPR001242 Condensation domain JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Pfam PF00668 Condensation domain 2555 2998 4.3E-89 T 14-10-2018 IPR001242 Condensation domain JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Gene3D G3DSA:3.30.559.10 1040 1215 1.5E-24 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Pfam PF00501 AMP-binding enzyme 3019 3424 5.0E-97 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Pfam PF00501 AMP-binding enzyme 457 866 1.1E-89 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Pfam PF00501 AMP-binding enzyme 1952 2364 2.6E-82 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 SMART SM01294 971 1038 0.0079 T 14-10-2018 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3554 3569 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 SUPERFAMILY SSF47336 3522 3595 2.62E-17 T 14-10-2018 IPR036736 ACP-like superfamily JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 SUPERFAMILY SSF52777 208 428 4.22E-31 T 14-10-2018 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 SUPERFAMILY SSF56801 441 987 1.7E-143 T 14-10-2018 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 SUPERFAMILY SSF52777 1497 1691 9.64E-34 T 14-10-2018 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Gene3D G3DSA:3.30.559.10 1502 1864 3.1E-100 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Gene3D G3DSA:3.40.50.12780 3014 3417 3.0E-135 T 14-10-2018 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Gene3D G3DSA:3.40.50.12780 441 859 1.1E-125 T 14-10-2018 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Gene3D G3DSA:3.40.50.12780 1941 2358 5.1E-118 T 14-10-2018 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Gene3D G3DSA:3.30.300.30 2359 2457 6.9E-25 T 14-10-2018 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 SUPERFAMILY SSF52777 1677 1916 6.0E-46 T 14-10-2018 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Gene3D G3DSA:3.30.559.30 2737 2982 2.1E-113 T 14-10-2018 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Pfam PF13193 AMP-binding enzyme C-terminal domain 3432 3506 2.9E-13 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Pfam PF13193 AMP-binding enzyme C-terminal domain 874 948 2.2E-7 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 ProSitePatterns PS00455 Putative AMP-binding domain signature. 606 617 - T 14-10-2018 IPR020845 AMP-binding, conserved site JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Pfam PF00550 Phosphopantetheine attachment site 3534 3595 1.3E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Pfam PF00550 Phosphopantetheine attachment site 976 1035 3.4E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Pfam PF00550 Phosphopantetheine attachment site 2474 2530 3.2E-6 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Gene3D G3DSA:3.30.559.30 1217 1469 1.7E-24 T 14-10-2018 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 SUPERFAMILY SSF47336 971 1036 3.27E-15 T 14-10-2018 IPR036736 ACP-like superfamily JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 SUPERFAMILY SSF52777 1049 1220 3.11E-16 T 14-10-2018 JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1985 2386 1.0E-119 T 14-10-2018 IPR010071 Amino acid adenylation domain JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3039 3448 3.9E-131 T 14-10-2018 IPR010071 Amino acid adenylation domain JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 477 890 1.3E-123 T 14-10-2018 IPR010071 Amino acid adenylation domain JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 ProSitePatterns PS00012 Phosphopantetheine attachment site. 998 1013 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Gene3D G3DSA:1.10.1200.10 969 1037 1.2E-19 T 14-10-2018 IPR036736 ACP-like superfamily JV59_06385 b9fbab55b66dc8cc38029860b33181b4 3623 Gene3D G3DSA:3.30.559.30 200 440 6.7E-34 T 14-10-2018 JV59_35205 4a07daf3174f2e05675a1966ae70579b 146 Pfam PF02050 Flagellar FliJ protein 18 140 3.3E-29 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 JV59_35205 4a07daf3174f2e05675a1966ae70579b 146 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 4.8E-33 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 JV59_24415 05dae5bad97ffb31cfb627fb8e9b84a3 446 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 68 1.4E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_24415 05dae5bad97ffb31cfb627fb8e9b84a3 446 Gene3D G3DSA:3.90.1150.10 101 436 1.9E-66 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_24415 05dae5bad97ffb31cfb627fb8e9b84a3 446 SMART SM00345 9 68 4.8E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_24415 05dae5bad97ffb31cfb627fb8e9b84a3 446 Gene3D G3DSA:1.10.10.10 2 69 1.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_24415 05dae5bad97ffb31cfb627fb8e9b84a3 446 Pfam PF00155 Aminotransferase class I and II 101 421 1.2E-25 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JV59_24415 05dae5bad97ffb31cfb627fb8e9b84a3 446 Gene3D G3DSA:3.40.640.10 120 337 1.9E-66 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_24415 05dae5bad97ffb31cfb627fb8e9b84a3 446 SUPERFAMILY SSF53383 76 436 4.35E-73 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_24415 05dae5bad97ffb31cfb627fb8e9b84a3 446 SUPERFAMILY SSF46785 5 78 2.18E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_36610 bc505ca340ac61c85311edf24e0e92f2 530 Pfam PF00474 Sodium:solute symporter family 38 449 1.5E-36 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 JV59_36610 bc505ca340ac61c85311edf24e0e92f2 530 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 38 469 5.3E-56 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 JV59_36610 bc505ca340ac61c85311edf24e0e92f2 530 Gene3D G3DSA:1.20.1730.10 27 528 8.5E-99 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily JV59_18320 2d4620d15a46144fd466680e128c118e 231 Gene3D G3DSA:3.40.190.10 109 202 5.9E-17 T 14-10-2018 JV59_18320 2d4620d15a46144fd466680e128c118e 231 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 31 230 6.4E-15 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_18320 2d4620d15a46144fd466680e128c118e 231 SUPERFAMILY SSF53850 31 231 5.21E-23 T 14-10-2018 JV59_18320 2d4620d15a46144fd466680e128c118e 231 Gene3D G3DSA:3.40.190.10 32 231 5.9E-17 T 14-10-2018 JV59_01335 92d2e448c6d597c49d375f1ab003e69e 234 SUPERFAMILY SSF53448 8 230 4.02E-61 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_01335 92d2e448c6d597c49d375f1ab003e69e 234 Gene3D G3DSA:3.90.550.10 2 233 2.7E-73 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_01335 92d2e448c6d597c49d375f1ab003e69e 234 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 105 112 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 JV59_01335 92d2e448c6d597c49d375f1ab003e69e 234 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 229 42.122 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 JV59_01335 92d2e448c6d597c49d375f1ab003e69e 234 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 8 230 1.4E-78 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 JV59_01335 92d2e448c6d597c49d375f1ab003e69e 234 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 229 8.4E-77 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 JV59_32885 82ea8c46bdea7e177332d276a720f719 288 Gene3D G3DSA:3.40.1090.10 1 92 3.8E-8 T 14-10-2018 JV59_32885 82ea8c46bdea7e177332d276a720f719 288 Gene3D G3DSA:3.40.1090.10 93 227 1.8E-8 T 14-10-2018 JV59_32885 82ea8c46bdea7e177332d276a720f719 288 SUPERFAMILY SSF52151 3 226 7.32E-32 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JV59_32885 82ea8c46bdea7e177332d276a720f719 288 Pfam PF01734 Patatin-like phospholipase 4 168 8.5E-14 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 JV59_35425 1fb5925b41a92c8ab239e18bc8cfff97 482 SUPERFAMILY SSF52821 401 481 2.1E-11 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JV59_35425 1fb5925b41a92c8ab239e18bc8cfff97 482 Gene3D G3DSA:3.40.250.10 398 482 1.5E-10 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JV59_35425 1fb5925b41a92c8ab239e18bc8cfff97 482 Pfam PF02926 THUMP domain 50 158 4.0E-23 T 14-10-2018 IPR004114 THUMP domain GO:0003723 JV59_35425 1fb5925b41a92c8ab239e18bc8cfff97 482 SUPERFAMILY SSF143437 1 173 3.14E-47 T 14-10-2018 JV59_35425 1fb5925b41a92c8ab239e18bc8cfff97 482 SMART SM00981 75 165 2.6E-24 T 14-10-2018 IPR004114 THUMP domain GO:0003723 JV59_35425 1fb5925b41a92c8ab239e18bc8cfff97 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 375 2.3E-114 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 JV59_35425 1fb5925b41a92c8ab239e18bc8cfff97 482 Gene3D G3DSA:3.30.2130.30 1 174 2.4E-32 T 14-10-2018 JV59_35425 1fb5925b41a92c8ab239e18bc8cfff97 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 1.1E-72 T 14-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 JV59_35425 1fb5925b41a92c8ab239e18bc8cfff97 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 222.862 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 JV59_35425 1fb5925b41a92c8ab239e18bc8cfff97 482 SUPERFAMILY SSF52402 174 372 4.41E-42 T 14-10-2018 JV59_35425 1fb5925b41a92c8ab239e18bc8cfff97 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 4.5E-42 T 14-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 JV59_35425 1fb5925b41a92c8ab239e18bc8cfff97 482 Gene3D G3DSA:3.40.50.620 175 397 1.8E-50 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_35870 a19e63eaa4d07ea9f7cc3ef696993c05 417 Gene3D G3DSA:3.50.50.60 100 401 6.1E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_35870 a19e63eaa4d07ea9f7cc3ef696993c05 417 SUPERFAMILY SSF51905 2 401 6.34E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_35870 a19e63eaa4d07ea9f7cc3ef696993c05 417 SUPERFAMILY SSF54373 270 360 2.75E-17 T 14-10-2018 JV59_35870 a19e63eaa4d07ea9f7cc3ef696993c05 417 Gene3D G3DSA:3.50.50.60 3 63 3.2E-11 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_35870 a19e63eaa4d07ea9f7cc3ef696993c05 417 Pfam PF01266 FAD dependent oxidoreductase 2 397 1.2E-72 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JV59_35870 a19e63eaa4d07ea9f7cc3ef696993c05 417 Gene3D G3DSA:3.30.9.10 134 363 6.1E-55 T 14-10-2018 JV59_29205 0200eee79c03734a62f00e54bd6fd6f2 610 SUPERFAMILY SSF82771 16 100 4.71E-23 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 JV59_29205 0200eee79c03734a62f00e54bd6fd6f2 610 SMART SM00465 17 98 2.9E-23 T 14-10-2018 IPR000305 GIY-YIG endonuclease JV59_29205 0200eee79c03734a62f00e54bd6fd6f2 610 Gene3D G3DSA:3.40.1440.10 6 102 3.9E-31 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 JV59_29205 0200eee79c03734a62f00e54bd6fd6f2 610 Pfam PF14520 Helix-hairpin-helix domain 558 609 2.3E-10 T 14-10-2018 JV59_29205 0200eee79c03734a62f00e54bd6fd6f2 610 Pfam PF02151 UvrB/uvrC motif 205 238 1.2E-9 T 14-10-2018 IPR001943 UVR domain GO:0005515 JV59_29205 0200eee79c03734a62f00e54bd6fd6f2 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 28.371 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 JV59_29205 0200eee79c03734a62f00e54bd6fd6f2 610 Gene3D G3DSA:1.10.150.20 555 610 1.0E-24 T 14-10-2018 JV59_29205 0200eee79c03734a62f00e54bd6fd6f2 610 Gene3D G3DSA:3.30.420.340 380 552 1.6E-44 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily JV59_29205 0200eee79c03734a62f00e54bd6fd6f2 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 9 589 7.2E-210 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 JV59_29205 0200eee79c03734a62f00e54bd6fd6f2 610 SMART SM00278 556 575 0.24 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JV59_29205 0200eee79c03734a62f00e54bd6fd6f2 610 SMART SM00278 588 607 3.7 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JV59_29205 0200eee79c03734a62f00e54bd6fd6f2 610 SUPERFAMILY SSF47781 521 609 2.54E-19 T 14-10-2018 IPR010994 RuvA domain 2-like JV59_29205 0200eee79c03734a62f00e54bd6fd6f2 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 3.1E-12 T 14-10-2018 IPR000305 GIY-YIG endonuclease JV59_29205 0200eee79c03734a62f00e54bd6fd6f2 610 SUPERFAMILY SSF46600 190 243 8.24E-13 T 14-10-2018 IPR036876 UVR domain superfamily JV59_29205 0200eee79c03734a62f00e54bd6fd6f2 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 387 542 2.6E-42 T 14-10-2018 IPR001162 UvrC family homology region JV59_29380 7996584dbc5d0e14531f9fde99ed977d 332 Gene3D G3DSA:3.40.50.2300 159 332 3.4E-28 T 14-10-2018 JV59_29380 7996584dbc5d0e14531f9fde99ed977d 332 SMART SM00354 5 78 5.5E-29 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_29380 7996584dbc5d0e14531f9fde99ed977d 332 Pfam PF13377 Periplasmic binding protein-like domain 185 331 7.4E-12 T 14-10-2018 JV59_29380 7996584dbc5d0e14531f9fde99ed977d 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 14-10-2018 JV59_29380 7996584dbc5d0e14531f9fde99ed977d 332 SUPERFAMILY SSF47413 7 63 2.02E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_29380 7996584dbc5d0e14531f9fde99ed977d 332 SUPERFAMILY SSF53822 65 320 7.66E-41 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_29380 7996584dbc5d0e14531f9fde99ed977d 332 Gene3D G3DSA:1.10.260.40 6 66 1.1E-23 T 14-10-2018 JV59_29380 7996584dbc5d0e14531f9fde99ed977d 332 Gene3D G3DSA:3.40.50.2300 67 156 7.1E-19 T 14-10-2018 JV59_29380 7996584dbc5d0e14531f9fde99ed977d 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 55 9.0E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_36105 c81928c71ed2e29dc2cc605b9a049ab3 466 Pfam PF16325 Peptidase family U32 C-terminal domain 372 452 7.9E-21 T 14-10-2018 IPR032525 Peptidase family U32, C-terminal JV59_36105 c81928c71ed2e29dc2cc605b9a049ab3 466 Pfam PF01136 Peptidase family U32 80 355 2.6E-96 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 JV59_36105 c81928c71ed2e29dc2cc605b9a049ab3 466 Gene3D G3DSA:2.40.30.10 367 453 4.3E-8 T 14-10-2018 JV59_36105 c81928c71ed2e29dc2cc605b9a049ab3 466 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 JV59_01125 2e919fca3fc978b45b6c67fa28e2d796 214 Gene3D G3DSA:1.10.150.240 16 80 3.9E-49 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JV59_01125 2e919fca3fc978b45b6c67fa28e2d796 214 SUPERFAMILY SSF56784 1 213 2.66E-47 T 14-10-2018 IPR036412 HAD-like superfamily JV59_01125 2e919fca3fc978b45b6c67fa28e2d796 214 Gene3D G3DSA:3.40.50.1000 4 185 3.9E-49 T 14-10-2018 IPR023214 HAD superfamily JV59_01125 2e919fca3fc978b45b6c67fa28e2d796 214 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 184 1.3E-30 T 14-10-2018 JV59_01125 2e919fca3fc978b45b6c67fa28e2d796 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 1.4E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_01125 2e919fca3fc978b45b6c67fa28e2d796 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 1.4E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_01125 2e919fca3fc978b45b6c67fa28e2d796 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 1.4E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_01125 2e919fca3fc978b45b6c67fa28e2d796 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 1.4E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_01125 2e919fca3fc978b45b6c67fa28e2d796 214 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 4 184 4.4E-18 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_39350 1183747b9e37ddcf4d767d219ef9d550 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 265 296 5.0E-6 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_39350 1183747b9e37ddcf4d767d219ef9d550 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 348 9.0E-4 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_39350 1183747b9e37ddcf4d767d219ef9d550 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 6.9E-8 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_39350 1183747b9e37ddcf4d767d219ef9d550 453 SUPERFAMILY SSF51161 252 434 2.02E-50 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JV59_39350 1183747b9e37ddcf4d767d219ef9d550 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 1.1E-202 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 JV59_39350 1183747b9e37ddcf4d767d219ef9d550 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 JV59_39350 1183747b9e37ddcf4d767d219ef9d550 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.059 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 JV59_39350 1183747b9e37ddcf4d767d219ef9d550 453 Gene3D G3DSA:3.90.550.10 1 224 4.7E-66 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_39350 1183747b9e37ddcf4d767d219ef9d550 453 Gene3D G3DSA:2.160.10.10 225 453 6.2E-71 T 14-10-2018 JV59_39350 1183747b9e37ddcf4d767d219ef9d550 453 Pfam PF12804 MobA-like NTP transferase domain 5 122 1.7E-21 T 14-10-2018 IPR025877 MobA-like NTP transferase JV59_39350 1183747b9e37ddcf4d767d219ef9d550 453 SUPERFAMILY SSF53448 1 249 1.19E-62 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_40630 9ed035e5db864e09427cd4696acc9bc5 166 SMART SM00530 34 91 9.3E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_40630 9ed035e5db864e09427cd4696acc9bc5 166 TIGRFAM TIGR02612 mob_myst_A: mobile mystery protein A 10 154 4.0E-41 T 14-10-2018 IPR013435 Mobile mystery protein A JV59_40630 9ed035e5db864e09427cd4696acc9bc5 166 Gene3D G3DSA:1.10.260.40 33 93 5.4E-9 T 14-10-2018 JV59_40630 9ed035e5db864e09427cd4696acc9bc5 166 SUPERFAMILY SSF47413 34 91 5.93E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_23345 60ab180741d4463b1589bdad2038c659 548 Gene3D G3DSA:1.10.287.950 209 542 4.0E-62 T 14-10-2018 JV59_23345 60ab180741d4463b1589bdad2038c659 548 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 502 8.2E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_23345 60ab180741d4463b1589bdad2038c659 548 SMART SM00283 279 547 1.4E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_23345 60ab180741d4463b1589bdad2038c659 548 SUPERFAMILY SSF58104 239 546 4.32E-61 T 14-10-2018 JV59_23345 60ab180741d4463b1589bdad2038c659 548 SMART SM00304 209 264 5.6E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_23345 60ab180741d4463b1589bdad2038c659 548 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 35 153 1.2E-17 T 14-10-2018 IPR029095 NarX-like, N-terminal JV59_23345 60ab180741d4463b1589bdad2038c659 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 6.6E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_23345 60ab180741d4463b1589bdad2038c659 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 293 322 6.6E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_30065 94bfd33b48ce541ca3d526bbf03c954d 311 Pfam PF03466 LysR substrate binding domain 99 297 3.6E-20 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_30065 94bfd33b48ce541ca3d526bbf03c954d 311 Gene3D G3DSA:1.10.10.10 1 87 1.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_30065 94bfd33b48ce541ca3d526bbf03c954d 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 1.8E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_30065 94bfd33b48ce541ca3d526bbf03c954d 311 SUPERFAMILY SSF46785 6 83 6.78E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_30065 94bfd33b48ce541ca3d526bbf03c954d 311 Gene3D G3DSA:3.40.190.10 172 270 5.0E-61 T 14-10-2018 JV59_30065 94bfd33b48ce541ca3d526bbf03c954d 311 SUPERFAMILY SSF53850 91 296 1.93E-40 T 14-10-2018 JV59_30065 94bfd33b48ce541ca3d526bbf03c954d 311 Gene3D G3DSA:3.40.190.10 91 295 5.0E-61 T 14-10-2018 JV59_20680 bbe652877352611ab44e15c674ca3969 128 Gene3D G3DSA:1.10.1660.10 1 118 1.4E-24 T 14-10-2018 JV59_20680 bbe652877352611ab44e15c674ca3969 128 SMART SM00422 1 69 8.2E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_20680 bbe652877352611ab44e15c674ca3969 128 SUPERFAMILY SSF46955 1 120 2.34E-24 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily JV59_20680 bbe652877352611ab44e15c674ca3969 128 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_20680 bbe652877352611ab44e15c674ca3969 128 Pfam PF13411 MerR HTH family regulatory protein 1 68 1.8E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_23150 d88f5e172a78708f2a8463906d3e2b3f 1069 Gene3D G3DSA:1.20.1480.50 300 393 2.5E-11 T 14-10-2018 JV59_23150 d88f5e172a78708f2a8463906d3e2b3f 1069 SUPERFAMILY SSF158472 336 382 2.62E-7 T 14-10-2018 JV59_23150 d88f5e172a78708f2a8463906d3e2b3f 1069 SMART SM00304 334 386 0.0021 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_23150 d88f5e172a78708f2a8463906d3e2b3f 1069 SMART SM00304 562 614 54.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_23150 d88f5e172a78708f2a8463906d3e2b3f 1069 SMART SM00304 744 796 0.12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_23150 d88f5e172a78708f2a8463906d3e2b3f 1069 SMART SM00304 653 705 5.3 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_23150 d88f5e172a78708f2a8463906d3e2b3f 1069 Gene3D G3DSA:3.30.450.20 399 517 1.6E-27 T 14-10-2018 JV59_23150 d88f5e172a78708f2a8463906d3e2b3f 1069 SUPERFAMILY SSF58104 764 1045 4.97E-70 T 14-10-2018 JV59_23150 d88f5e172a78708f2a8463906d3e2b3f 1069 Gene3D G3DSA:1.10.287.950 744 1046 5.0E-84 T 14-10-2018 JV59_23150 d88f5e172a78708f2a8463906d3e2b3f 1069 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 855 1012 1.0E-52 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_23150 d88f5e172a78708f2a8463906d3e2b3f 1069 SMART SM00283 797 1044 4.1E-88 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_23150 d88f5e172a78708f2a8463906d3e2b3f 1069 SUPERFAMILY SSF55785 387 504 2.04E-5 T 14-10-2018 IPR035965 PAS domain superfamily JV59_23150 d88f5e172a78708f2a8463906d3e2b3f 1069 Gene3D G3DSA:1.20.120.1530 561 680 9.3E-10 T 14-10-2018 JV59_23150 d88f5e172a78708f2a8463906d3e2b3f 1069 Pfam PF08376 Nitrate and nitrite sensing 58 296 7.1E-51 T 14-10-2018 IPR013587 Nitrate/nitrite sensing protein JV59_23150 d88f5e172a78708f2a8463906d3e2b3f 1069 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 895 922 2.7E-46 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_23150 d88f5e172a78708f2a8463906d3e2b3f 1069 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 972 1001 2.7E-46 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_23150 d88f5e172a78708f2a8463906d3e2b3f 1069 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 924 953 2.7E-46 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_23150 d88f5e172a78708f2a8463906d3e2b3f 1069 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 818 847 2.7E-46 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_01935 78ff73d54e5a09d24394291820ef54f0 355 Gene3D G3DSA:2.30.42.10 257 354 6.3E-24 T 14-10-2018 JV59_01935 78ff73d54e5a09d24394291820ef54f0 355 PRINTS PR00834 HtrA/DegQ protease family signature 112 132 2.5E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JV59_01935 78ff73d54e5a09d24394291820ef54f0 355 PRINTS PR00834 HtrA/DegQ protease family signature 187 204 2.5E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JV59_01935 78ff73d54e5a09d24394291820ef54f0 355 PRINTS PR00834 HtrA/DegQ protease family signature 91 103 2.5E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JV59_01935 78ff73d54e5a09d24394291820ef54f0 355 PRINTS PR00834 HtrA/DegQ protease family signature 152 176 2.5E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JV59_01935 78ff73d54e5a09d24394291820ef54f0 355 PRINTS PR00834 HtrA/DegQ protease family signature 209 226 2.5E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JV59_01935 78ff73d54e5a09d24394291820ef54f0 355 PRINTS PR00834 HtrA/DegQ protease family signature 297 309 2.5E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JV59_01935 78ff73d54e5a09d24394291820ef54f0 355 SUPERFAMILY SSF50156 240 347 8.18E-22 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 JV59_01935 78ff73d54e5a09d24394291820ef54f0 355 SUPERFAMILY SSF50494 46 254 1.32E-61 T 14-10-2018 IPR009003 Peptidase S1, PA clan JV59_01935 78ff73d54e5a09d24394291820ef54f0 355 Gene3D G3DSA:2.40.10.10 32 142 2.8E-32 T 14-10-2018 JV59_01935 78ff73d54e5a09d24394291820ef54f0 355 Gene3D G3DSA:2.40.10.10 144 256 1.1E-35 T 14-10-2018 JV59_01935 78ff73d54e5a09d24394291820ef54f0 355 Pfam PF13365 Trypsin-like peptidase domain 82 216 7.0E-33 T 14-10-2018 JV59_01935 78ff73d54e5a09d24394291820ef54f0 355 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 352 8.6E-167 T 14-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 JV59_01935 78ff73d54e5a09d24394291820ef54f0 355 SMART SM00228 257 339 7.0E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JV59_01935 78ff73d54e5a09d24394291820ef54f0 355 Pfam PF13180 PDZ domain 258 347 3.7E-16 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JV59_34295 a6ba2c87cb3019dc78587705f7284648 354 Gene3D G3DSA:3.40.50.1100 51 157 3.8E-68 T 14-10-2018 JV59_34295 a6ba2c87cb3019dc78587705f7284648 354 SUPERFAMILY SSF53686 23 335 2.36E-70 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JV59_34295 a6ba2c87cb3019dc78587705f7284648 354 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 316 1.6E-41 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme JV59_34295 a6ba2c87cb3019dc78587705f7284648 354 Gene3D G3DSA:3.40.50.1100 24 324 3.8E-68 T 14-10-2018 JV59_25200 0af4a8d318075c8a92b9a2b2fb267690 380 Pfam PF02353 Mycolic acid cyclopropane synthetase 106 364 1.9E-79 T 14-10-2018 JV59_25200 0af4a8d318075c8a92b9a2b2fb267690 380 PIRSF PIRSF003085 4 379 3.3E-105 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 JV59_25200 0af4a8d318075c8a92b9a2b2fb267690 380 SUPERFAMILY SSF53335 113 368 7.43E-69 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_25200 0af4a8d318075c8a92b9a2b2fb267690 380 Gene3D G3DSA:3.40.50.150 110 373 1.9E-87 T 14-10-2018 JV59_27840 9e141a29e38a5e40e76daa48c40706cb 448 SMART SM00382 166 349 9.0E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_27840 9e141a29e38a5e40e76daa48c40706cb 448 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 154 365 4.3E-72 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_27840 9e141a29e38a5e40e76daa48c40706cb 448 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 356 365 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_27840 9e141a29e38a5e40e76daa48c40706cb 448 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 14 445 9.8E-160 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_27840 9e141a29e38a5e40e76daa48c40706cb 448 SUPERFAMILY SSF52540 102 370 6.28E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_27840 9e141a29e38a5e40e76daa48c40706cb 448 Gene3D G3DSA:3.40.50.12240 22 448 4.8E-148 T 14-10-2018 JV59_37725 32c22cea0ad0a90b7ad4bf67f9c18e2b 205 Pfam PF01583 Adenylylsulphate kinase 31 183 8.5E-72 T 14-10-2018 JV59_37725 32c22cea0ad0a90b7ad4bf67f9c18e2b 205 SUPERFAMILY SSF52540 26 202 1.18E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_37725 32c22cea0ad0a90b7ad4bf67f9c18e2b 205 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 14 195 7.3E-82 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 JV59_37725 32c22cea0ad0a90b7ad4bf67f9c18e2b 205 Gene3D G3DSA:3.40.50.300 9 205 2.2E-78 T 14-10-2018 JV59_37725 32c22cea0ad0a90b7ad4bf67f9c18e2b 205 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 30 202 38.249 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 JV59_36360 ad00861528793bbebdd39fc420aa1ab3 448 Gene3D G3DSA:3.40.50.300 149 358 1.5E-8 T 14-10-2018 JV59_36360 ad00861528793bbebdd39fc420aa1ab3 448 SUPERFAMILY SSF52540 153 437 4.15E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_36360 ad00861528793bbebdd39fc420aa1ab3 448 SMART SM00382 172 362 0.0012 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_27735 40f5955450d11544d2690c7b5547ebb8 242 Gene3D G3DSA:1.10.1740.10 17 98 2.3E-18 T 14-10-2018 JV59_27735 40f5955450d11544d2690c7b5547ebb8 242 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 240 1.2E-24 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JV59_27735 40f5955450d11544d2690c7b5547ebb8 242 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 28 240 4.6E-73 T 14-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 JV59_27735 40f5955450d11544d2690c7b5547ebb8 242 Pfam PF04545 Sigma-70, region 4 189 237 4.3E-10 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 JV59_27735 40f5955450d11544d2690c7b5547ebb8 242 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 210 236 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_27735 40f5955450d11544d2690c7b5547ebb8 242 Pfam PF04542 Sigma-70 region 2 28 101 1.4E-8 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JV59_27735 40f5955450d11544d2690c7b5547ebb8 242 SUPERFAMILY SSF88659 102 165 5.23E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JV59_27735 40f5955450d11544d2690c7b5547ebb8 242 PRINTS PR00046 Major sigma-70 factor signature 193 205 4.3E-5 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_27735 40f5955450d11544d2690c7b5547ebb8 242 PRINTS PR00046 Major sigma-70 factor signature 210 225 4.3E-5 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_27735 40f5955450d11544d2690c7b5547ebb8 242 PRINTS PR00046 Major sigma-70 factor signature 225 236 4.3E-5 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_27735 40f5955450d11544d2690c7b5547ebb8 242 PRINTS PR00046 Major sigma-70 factor signature 55 68 4.3E-5 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_27735 40f5955450d11544d2690c7b5547ebb8 242 Gene3D G3DSA:1.20.140.160 99 242 2.9E-33 T 14-10-2018 JV59_27735 40f5955450d11544d2690c7b5547ebb8 242 SUPERFAMILY SSF88659 168 241 3.55E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JV59_27735 40f5955450d11544d2690c7b5547ebb8 242 SUPERFAMILY SSF88946 25 100 8.44E-17 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JV59_01105 555a612fa591378c930ee8f762765864 219 Gene3D G3DSA:1.20.120.530 72 218 1.9E-15 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JV59_01105 555a612fa591378c930ee8f762765864 219 SMART SM00345 10 68 6.4E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_01105 555a612fa591378c930ee8f762765864 219 SUPERFAMILY SSF48008 74 211 1.6E-14 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JV59_01105 555a612fa591378c930ee8f762765864 219 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 68 1.6E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_01105 555a612fa591378c930ee8f762765864 219 Pfam PF07729 FCD domain 78 206 2.4E-13 T 14-10-2018 IPR011711 GntR, C-terminal JV59_01105 555a612fa591378c930ee8f762765864 219 Gene3D G3DSA:1.10.10.10 1 69 4.3E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_01105 555a612fa591378c930ee8f762765864 219 SMART SM00895 78 206 1.2E-5 T 14-10-2018 IPR011711 GntR, C-terminal JV59_01105 555a612fa591378c930ee8f762765864 219 SUPERFAMILY SSF46785 2 76 6.46E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_28295 d93a7ccbf55019296ff184f1c4960e05 405 SUPERFAMILY SSF109604 181 399 8.47E-41 T 14-10-2018 JV59_28295 d93a7ccbf55019296ff184f1c4960e05 405 SUPERFAMILY SSF141868 5 193 3.27E-26 T 14-10-2018 IPR035919 EAL domain superfamily JV59_28295 d93a7ccbf55019296ff184f1c4960e05 405 Gene3D G3DSA:3.20.20.450 2 196 2.5E-15 T 14-10-2018 IPR035919 EAL domain superfamily JV59_28295 d93a7ccbf55019296ff184f1c4960e05 405 SMART SM00052 2 195 0.0054 T 14-10-2018 IPR001633 EAL domain JV59_28295 d93a7ccbf55019296ff184f1c4960e05 405 PIRSF PIRSF003180 1 403 1.9E-160 T 14-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing JV59_28295 d93a7ccbf55019296ff184f1c4960e05 405 Gene3D G3DSA:1.10.3210.10 197 374 5.6E-21 T 14-10-2018 JV59_28295 d93a7ccbf55019296ff184f1c4960e05 405 Pfam PF00563 EAL domain 74 190 3.7E-11 T 14-10-2018 IPR001633 EAL domain JV59_28295 d93a7ccbf55019296ff184f1c4960e05 405 Pfam PF08668 HDOD domain 204 318 5.5E-14 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD JV59_02015 082ea6808102b20867db4acc9739656d 316 Gene3D G3DSA:1.10.150.170 112 218 4.9E-101 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 JV59_02015 082ea6808102b20867db4acc9739656d 316 Gene3D G3DSA:3.40.50.150 10 315 4.9E-101 T 14-10-2018 JV59_02015 082ea6808102b20867db4acc9739656d 316 PIRSF PIRSF004486 1 316 3.8E-100 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 JV59_02015 082ea6808102b20867db4acc9739656d 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 315 6.0E-119 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 JV59_02015 082ea6808102b20867db4acc9739656d 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 37.426 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 JV59_02015 082ea6808102b20867db4acc9739656d 316 SUPERFAMILY SSF53335 7 316 2.4E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_02015 082ea6808102b20867db4acc9739656d 316 SUPERFAMILY SSF81799 113 216 4.45E-31 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 JV59_02015 082ea6808102b20867db4acc9739656d 316 Pfam PF01795 MraW methylase family 4 315 1.8E-109 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 JV59_21730 c27ad480b062994d457da0071b1183d4 310 Gene3D G3DSA:1.10.3720.10 81 309 5.1E-32 T 14-10-2018 IPR035906 MetI-like superfamily JV59_21730 c27ad480b062994d457da0071b1183d4 310 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 33 307 7.6E-92 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 JV59_21730 c27ad480b062994d457da0071b1183d4 310 SUPERFAMILY SSF161098 34 304 3.4E-35 T 14-10-2018 IPR035906 MetI-like superfamily JV59_21730 c27ad480b062994d457da0071b1183d4 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 306 1.5E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_37555 b24d468e56a307fb51ae4728266a4b43 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 178 335 4.3E-44 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_37555 b24d468e56a307fb51ae4728266a4b43 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 437 554 1.4E-5 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_37555 b24d468e56a307fb51ae4728266a4b43 578 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 485 501 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_37555 b24d468e56a307fb51ae4728266a4b43 578 Gene3D G3DSA:3.30.413.10 432 575 1.1E-34 T 14-10-2018 JV59_37555 b24d468e56a307fb51ae4728266a4b43 578 Gene3D G3DSA:3.90.480.20 21 415 1.9E-81 T 14-10-2018 JV59_37555 b24d468e56a307fb51ae4728266a4b43 578 SUPERFAMILY SSF55124 352 427 4.09E-21 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_37555 b24d468e56a307fb51ae4728266a4b43 578 SUPERFAMILY SSF56014 435 566 1.15E-33 T 14-10-2018 JV59_37555 b24d468e56a307fb51ae4728266a4b43 578 PRINTS PR00397 Sirohaem Fe-binding site signature 485 503 4.7E-9 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_37555 b24d468e56a307fb51ae4728266a4b43 578 PRINTS PR00397 Sirohaem Fe-binding site signature 436 454 4.7E-9 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_37555 b24d468e56a307fb51ae4728266a4b43 578 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 24 566 4.1E-285 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_37555 b24d468e56a307fb51ae4728266a4b43 578 SUPERFAMILY SSF55124 19 150 2.78E-27 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_37555 b24d468e56a307fb51ae4728266a4b43 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 359 422 5.8E-14 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_37555 b24d468e56a307fb51ae4728266a4b43 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 143 1.6E-13 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_37555 b24d468e56a307fb51ae4728266a4b43 578 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 15 578 58.362 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_37555 b24d468e56a307fb51ae4728266a4b43 578 SUPERFAMILY SSF56014 154 350 7.46E-58 T 14-10-2018 JV59_37555 b24d468e56a307fb51ae4728266a4b43 578 Gene3D G3DSA:3.30.413.10 146 354 1.9E-81 T 14-10-2018 JV59_19650 197a1042672b1821d9d1c2bc9cd7a7fc 263 Pfam PF09850 Type VI secretion system protein DotU 47 247 6.5E-51 T 14-10-2018 IPR017732 Type IV / VI secretion system, DotU JV59_19650 197a1042672b1821d9d1c2bc9cd7a7fc 263 Gene3D G3DSA:1.25.40.590 44 201 4.9E-48 T 14-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily JV59_19650 197a1042672b1821d9d1c2bc9cd7a7fc 263 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 46 253 2.4E-61 T 14-10-2018 IPR017732 Type IV / VI secretion system, DotU JV59_35535 ff588e4b223260e7617711f512f7e696 548 Gene3D G3DSA:3.40.120.10 12 218 4.0E-74 T 14-10-2018 JV59_35535 ff588e4b223260e7617711f512f7e696 548 Gene3D G3DSA:3.40.120.10 319 442 2.2E-35 T 14-10-2018 JV59_35535 ff588e4b223260e7617711f512f7e696 548 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 543 0.0 T 14-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 JV59_35535 ff588e4b223260e7617711f512f7e696 548 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 1.1E-17 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_35535 ff588e4b223260e7617711f512f7e696 548 Gene3D G3DSA:3.40.120.10 221 318 2.9E-45 T 14-10-2018 JV59_35535 ff588e4b223260e7617711f512f7e696 548 SUPERFAMILY SSF53738 209 317 8.95E-9 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_35535 ff588e4b223260e7617711f512f7e696 548 SUPERFAMILY SSF55957 433 543 1.23E-19 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_35535 ff588e4b223260e7617711f512f7e696 548 SUPERFAMILY SSF53738 26 235 1.15E-51 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_35535 ff588e4b223260e7617711f512f7e696 548 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 178 2.8E-39 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_35535 ff588e4b223260e7617711f512f7e696 548 Gene3D G3DSA:3.30.310.50 443 546 1.8E-35 T 14-10-2018 JV59_35535 ff588e4b223260e7617711f512f7e696 548 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 487 536 1.1E-7 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_35535 ff588e4b223260e7617711f512f7e696 548 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 438 1.0E-28 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_35535 ff588e4b223260e7617711f512f7e696 548 SUPERFAMILY SSF53738 305 446 2.47E-31 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_35535 ff588e4b223260e7617711f512f7e696 548 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_30985 a397e7c03dd0dd0f8a3abfa776f71be9 274 Gene3D G3DSA:3.40.140.10 121 271 5.2E-43 T 14-10-2018 JV59_30985 a397e7c03dd0dd0f8a3abfa776f71be9 274 SUPERFAMILY SSF53927 13 265 6.92E-71 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 JV59_30985 a397e7c03dd0dd0f8a3abfa776f71be9 274 Gene3D G3DSA:3.10.20.10 35 117 1.4E-9 T 14-10-2018 JV59_30985 a397e7c03dd0dd0f8a3abfa776f71be9 274 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 11 266 26.298 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 JV59_30985 a397e7c03dd0dd0f8a3abfa776f71be9 274 Pfam PF02634 FdhD/NarQ family 34 265 6.0E-74 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 JV59_30985 a397e7c03dd0dd0f8a3abfa776f71be9 274 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 31 266 8.9E-42 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 JV59_30985 a397e7c03dd0dd0f8a3abfa776f71be9 274 PIRSF PIRSF015626 1 270 6.7E-98 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 JV59_30830 12ad93167091ccdf65497992380f2b1d 238 SMART SM00382 29 213 2.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_30830 12ad93167091ccdf65497992380f2b1d 238 SUPERFAMILY SSF52540 5 217 1.15E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_30830 12ad93167091ccdf65497992380f2b1d 238 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_30830 12ad93167091ccdf65497992380f2b1d 238 Gene3D G3DSA:3.40.50.300 1 237 3.4E-51 T 14-10-2018 JV59_30830 12ad93167091ccdf65497992380f2b1d 238 Pfam PF00005 ABC transporter 24 165 8.7E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_28380 342298d075a5bac5ba0a2264cb772f05 197 Pfam PF04994 TfoX C-terminal domain 115 194 1.3E-31 T 14-10-2018 IPR007077 TfoX, C-terminal JV59_28380 342298d075a5bac5ba0a2264cb772f05 197 SUPERFAMILY SSF159894 5 104 4.71E-29 T 14-10-2018 JV59_28380 342298d075a5bac5ba0a2264cb772f05 197 PIRSF PIRSF028788 1 197 4.7E-45 T 14-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type JV59_28380 342298d075a5bac5ba0a2264cb772f05 197 Gene3D G3DSA:3.30.1460.30 1 105 1.2E-33 T 14-10-2018 JV59_28380 342298d075a5bac5ba0a2264cb772f05 197 Pfam PF04993 TfoX N-terminal domain 12 101 1.3E-27 T 14-10-2018 IPR007076 TfoX, N-terminal JV59_28380 342298d075a5bac5ba0a2264cb772f05 197 Gene3D G3DSA:1.10.150.20 115 197 8.9E-24 T 14-10-2018 JV59_17135 7e1c63f275f17637a4dd390c1d900440 312 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 33 1.2E-10 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_17135 7e1c63f275f17637a4dd390c1d900440 312 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 45 290 1.6E-25 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain JV59_17135 7e1c63f275f17637a4dd390c1d900440 312 SMART SM00354 1 56 1.1E-13 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_17135 7e1c63f275f17637a4dd390c1d900440 312 Gene3D G3DSA:3.40.50.2300 48 290 8.3E-69 T 14-10-2018 JV59_17135 7e1c63f275f17637a4dd390c1d900440 312 SUPERFAMILY SSF47413 1 44 3.47E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_17135 7e1c63f275f17637a4dd390c1d900440 312 Gene3D G3DSA:3.40.50.2300 142 273 8.3E-69 T 14-10-2018 JV59_17135 7e1c63f275f17637a4dd390c1d900440 312 Gene3D G3DSA:1.10.260.40 1 43 5.6E-10 T 14-10-2018 JV59_17135 7e1c63f275f17637a4dd390c1d900440 312 SUPERFAMILY SSF53822 43 293 2.78E-58 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_36245 a7de2f041d81e860b5087d3dbdab20b2 328 Pfam PF13377 Periplasmic binding protein-like domain 167 326 1.4E-33 T 14-10-2018 JV59_36245 a7de2f041d81e860b5087d3dbdab20b2 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 JV59_36245 a7de2f041d81e860b5087d3dbdab20b2 328 SMART SM00354 1 74 3.7E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_36245 a7de2f041d81e860b5087d3dbdab20b2 328 Gene3D G3DSA:3.40.50.2300 79 318 5.5E-47 T 14-10-2018 JV59_36245 a7de2f041d81e860b5087d3dbdab20b2 328 Gene3D G3DSA:1.10.260.40 1 60 1.3E-17 T 14-10-2018 JV59_36245 a7de2f041d81e860b5087d3dbdab20b2 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.7E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_36245 a7de2f041d81e860b5087d3dbdab20b2 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.7E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_36245 a7de2f041d81e860b5087d3dbdab20b2 328 SUPERFAMILY SSF53822 77 323 3.34E-44 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_36245 a7de2f041d81e860b5087d3dbdab20b2 328 Gene3D G3DSA:3.40.50.2300 158 320 5.5E-47 T 14-10-2018 JV59_36245 a7de2f041d81e860b5087d3dbdab20b2 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 7.3E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_36245 a7de2f041d81e860b5087d3dbdab20b2 328 SUPERFAMILY SSF47413 1 57 1.97E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_22125 121ad29ff7a53e0e5946cbdd5fa44c82 175 Gene3D G3DSA:3.30.70.100 46 165 2.3E-7 T 14-10-2018 JV59_22125 121ad29ff7a53e0e5946cbdd5fa44c82 175 Pfam PF07110 EthD domain 65 159 1.1E-9 T 14-10-2018 IPR009799 EthD domain JV59_22125 121ad29ff7a53e0e5946cbdd5fa44c82 175 SUPERFAMILY SSF54909 53 170 1.64E-10 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_38195 2575495aef871798a88862dcd2069eba 98 SUPERFAMILY SSF46689 8 98 1.84E-24 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_38195 2575495aef871798a88862dcd2069eba 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.402 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 JV59_38195 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 JV59_38195 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 JV59_38195 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 JV59_38195 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 JV59_38195 2575495aef871798a88862dcd2069eba 98 PIRSF PIRSF002097 1 98 2.6E-44 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 JV59_38195 2575495aef871798a88862dcd2069eba 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 4.0E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_38195 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_38195 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_38195 2575495aef871798a88862dcd2069eba 98 Gene3D G3DSA:1.10.10.60 1 98 2.7E-32 T 14-10-2018 JV59_22425 fc7edfc7a3fbef855e4c8319157d0f09 726 Gene3D G3DSA:3.20.20.80 234 612 2.4E-160 T 14-10-2018 JV59_22425 fc7edfc7a3fbef855e4c8319157d0f09 726 SUPERFAMILY SSF51011 623 725 3.15E-29 T 14-10-2018 JV59_22425 fc7edfc7a3fbef855e4c8319157d0f09 726 Gene3D G3DSA:2.60.40.10 5 220 9.8E-51 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_22425 fc7edfc7a3fbef855e4c8319157d0f09 726 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 116 723 7.5E-248 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 JV59_22425 fc7edfc7a3fbef855e4c8319157d0f09 726 SUPERFAMILY SSF51445 179 616 2.85E-108 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_22425 fc7edfc7a3fbef855e4c8319157d0f09 726 PIRSF PIRSF000463 9 726 3.1E-279 T 14-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 JV59_22425 fc7edfc7a3fbef855e4c8319157d0f09 726 Pfam PF00128 Alpha amylase, catalytic domain 275 349 4.6E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_22425 fc7edfc7a3fbef855e4c8319157d0f09 726 SUPERFAMILY SSF81296 21 106 9.0E-13 T 14-10-2018 IPR014756 Immunoglobulin E-set JV59_22425 fc7edfc7a3fbef855e4c8319157d0f09 726 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 133 207 1.7E-18 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 JV59_22425 fc7edfc7a3fbef855e4c8319157d0f09 726 SUPERFAMILY SSF81296 139 193 1.82E-6 T 14-10-2018 IPR014756 Immunoglobulin E-set JV59_22425 fc7edfc7a3fbef855e4c8319157d0f09 726 Gene3D G3DSA:2.60.40.1180 623 726 1.8E-30 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta JV59_22425 fc7edfc7a3fbef855e4c8319157d0f09 726 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 628 725 4.4E-18 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 JV59_22425 fc7edfc7a3fbef855e4c8319157d0f09 726 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 91 726 40.935 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 JV59_22425 fc7edfc7a3fbef855e4c8319157d0f09 726 SMART SM00642 250 595 5.9E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_25990 3ec72de2439b489648a3b0ac7f664b45 182 SMART SM00738 6 115 2.2E-49 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 JV59_25990 3ec72de2439b489648a3b0ac7f664b45 182 Pfam PF02357 Transcription termination factor nusG 7 112 2.0E-26 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 JV59_25990 3ec72de2439b489648a3b0ac7f664b45 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 6.8E-22 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 JV59_25990 3ec72de2439b489648a3b0ac7f664b45 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 6.8E-22 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 JV59_25990 3ec72de2439b489648a3b0ac7f664b45 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 6.8E-22 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 JV59_25990 3ec72de2439b489648a3b0ac7f664b45 182 Gene3D G3DSA:3.30.70.940 1 122 6.0E-47 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 JV59_25990 3ec72de2439b489648a3b0ac7f664b45 182 SUPERFAMILY SSF82679 6 116 1.1E-39 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 JV59_25990 3ec72de2439b489648a3b0ac7f664b45 182 Gene3D G3DSA:2.30.30.30 123 181 3.7E-26 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 JV59_25990 3ec72de2439b489648a3b0ac7f664b45 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 181 2.8E-70 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 JV59_25990 3ec72de2439b489648a3b0ac7f664b45 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 25.58 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 JV59_25990 3ec72de2439b489648a3b0ac7f664b45 182 Pfam PF00467 KOW motif 131 162 3.9E-8 T 14-10-2018 IPR005824 KOW JV59_25990 3ec72de2439b489648a3b0ac7f664b45 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site JV59_25990 3ec72de2439b489648a3b0ac7f664b45 182 SUPERFAMILY SSF50104 126 181 5.78E-20 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily JV59_25990 3ec72de2439b489648a3b0ac7f664b45 182 SMART SM00739 127 154 6.4E-5 T 14-10-2018 IPR005824 KOW JV59_34105 9150d1c52856fadf67e4bddd9b641297 667 Gene3D G3DSA:3.10.170.10 190 341 1.2E-58 T 14-10-2018 JV59_34105 9150d1c52856fadf67e4bddd9b641297 667 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 340 484 4.1E-33 T 14-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 JV59_34105 9150d1c52856fadf67e4bddd9b641297 667 SUPERFAMILY SSF55486 191 485 1.1E-82 T 14-10-2018 JV59_34105 9150d1c52856fadf67e4bddd9b641297 667 Gene3D G3DSA:3.10.450.40 108 189 2.6E-20 T 14-10-2018 JV59_34105 9150d1c52856fadf67e4bddd9b641297 667 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 349 360 2.2E-25 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 JV59_34105 9150d1c52856fadf67e4bddd9b641297 667 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 294 314 2.2E-25 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 JV59_34105 9150d1c52856fadf67e4bddd9b641297 667 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 328 344 2.2E-25 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 JV59_34105 9150d1c52856fadf67e4bddd9b641297 667 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 411 427 2.2E-25 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 JV59_34105 9150d1c52856fadf67e4bddd9b641297 667 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 200 337 1.2E-32 T 14-10-2018 IPR013856 Peptidase M4 domain GO:0004222 JV59_34105 9150d1c52856fadf67e4bddd9b641297 667 Pfam PF03413 Peptidase propeptide and YPEB domain 113 184 1.1E-6 T 14-10-2018 IPR025711 PepSY domain JV59_34105 9150d1c52856fadf67e4bddd9b641297 667 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 55 96 9.2E-5 T 14-10-2018 IPR011096 FTP domain JV59_34105 9150d1c52856fadf67e4bddd9b641297 667 Gene3D G3DSA:2.60.120.380 507 602 8.1E-12 T 14-10-2018 JV59_34105 9150d1c52856fadf67e4bddd9b641297 667 Gene3D G3DSA:1.10.390.10 342 492 2.7E-45 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily JV59_28995 5f6460075ce7a35a95c0538d1a33f8b4 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 1.9E-11 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain JV59_28995 5f6460075ce7a35a95c0538d1a33f8b4 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 293 2.0E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_28995 5f6460075ce7a35a95c0538d1a33f8b4 295 SUPERFAMILY SSF161098 89 276 1.44E-22 T 14-10-2018 IPR035906 MetI-like superfamily JV59_28995 5f6460075ce7a35a95c0538d1a33f8b4 295 Gene3D G3DSA:1.10.3720.10 86 291 1.2E-18 T 14-10-2018 IPR035906 MetI-like superfamily JV59_20790 d2e8cc99f2f8d114c35d4b2f06899455 1033 Gene3D G3DSA:3.30.70.1440 668 859 1.7E-253 T 14-10-2018 JV59_20790 d2e8cc99f2f8d114c35d4b2f06899455 1033 SUPERFAMILY SSF82866 797 1022 8.63E-46 T 14-10-2018 JV59_20790 d2e8cc99f2f8d114c35d4b2f06899455 1033 SUPERFAMILY SSF82714 724 797 1.09E-8 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_20790 d2e8cc99f2f8d114c35d4b2f06899455 1033 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 5.2E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_20790 d2e8cc99f2f8d114c35d4b2f06899455 1033 PRINTS PR00702 Acriflavin resistance protein family signature 378 402 5.2E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_20790 d2e8cc99f2f8d114c35d4b2f06899455 1033 PRINTS PR00702 Acriflavin resistance protein family signature 324 347 5.2E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_20790 d2e8cc99f2f8d114c35d4b2f06899455 1033 PRINTS PR00702 Acriflavin resistance protein family signature 431 454 5.2E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_20790 d2e8cc99f2f8d114c35d4b2f06899455 1033 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 5.2E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_20790 d2e8cc99f2f8d114c35d4b2f06899455 1033 Gene3D G3DSA:1.20.1640.10 500 1019 1.7E-253 T 14-10-2018 JV59_20790 d2e8cc99f2f8d114c35d4b2f06899455 1033 SUPERFAMILY SSF82866 286 480 1.96E-34 T 14-10-2018 JV59_20790 d2e8cc99f2f8d114c35d4b2f06899455 1033 SUPERFAMILY SSF82693 136 317 3.14E-7 T 14-10-2018 JV59_20790 d2e8cc99f2f8d114c35d4b2f06899455 1033 Gene3D G3DSA:3.30.2090.10 173 265 1.7E-253 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_20790 d2e8cc99f2f8d114c35d4b2f06899455 1033 Gene3D G3DSA:3.30.70.1320 131 318 1.7E-253 T 14-10-2018 JV59_20790 d2e8cc99f2f8d114c35d4b2f06899455 1033 Gene3D G3DSA:3.30.70.1430 557 667 1.7E-253 T 14-10-2018 JV59_20790 d2e8cc99f2f8d114c35d4b2f06899455 1033 Gene3D G3DSA:3.30.70.1430 38 810 1.7E-253 T 14-10-2018 JV59_20790 d2e8cc99f2f8d114c35d4b2f06899455 1033 Pfam PF00873 AcrB/AcrD/AcrF family 1 1021 1.0E-159 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_20790 d2e8cc99f2f8d114c35d4b2f06899455 1033 Gene3D G3DSA:1.20.1640.10 8 499 1.7E-253 T 14-10-2018 JV59_20790 d2e8cc99f2f8d114c35d4b2f06899455 1033 Gene3D G3DSA:3.30.2090.10 715 802 1.7E-253 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_20790 d2e8cc99f2f8d114c35d4b2f06899455 1033 SUPERFAMILY SSF82693 38 131 2.2E-18 T 14-10-2018 JV59_20790 d2e8cc99f2f8d114c35d4b2f06899455 1033 SUPERFAMILY SSF82714 177 259 1.09E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_19560 65b00d6f63a7ffce1663c255389177b6 589 SUPERFAMILY SSF51004 104 300 4.18E-15 T 14-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily JV59_19560 65b00d6f63a7ffce1663c255389177b6 589 Gene3D G3DSA:2.130.10.10 45 303 7.6E-9 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 JV59_35920 7d039e2d88ed6d237f0a34afc97e0df7 495 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 382 461 1.7E-25 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like JV59_35920 7d039e2d88ed6d237f0a34afc97e0df7 495 Gene3D G3DSA:3.40.50.300 179 379 1.9E-49 T 14-10-2018 JV59_35920 7d039e2d88ed6d237f0a34afc97e0df7 495 PIRSF PIRSF006485 1 470 1.0E-179 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 JV59_35920 7d039e2d88ed6d237f0a34afc97e0df7 495 Pfam PF01926 50S ribosome-binding GTPase 5 119 6.3E-27 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JV59_35920 7d039e2d88ed6d237f0a34afc97e0df7 495 Pfam PF01926 50S ribosome-binding GTPase 209 326 1.3E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JV59_35920 7d039e2d88ed6d237f0a34afc97e0df7 495 Gene3D G3DSA:3.40.50.300 2 160 2.9E-42 T 14-10-2018 JV59_35920 7d039e2d88ed6d237f0a34afc97e0df7 495 SUPERFAMILY SSF52540 179 468 1.11E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_35920 7d039e2d88ed6d237f0a34afc97e0df7 495 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 205 371 7.5E-27 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JV59_35920 7d039e2d88ed6d237f0a34afc97e0df7 495 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 156 5.0E-21 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JV59_35920 7d039e2d88ed6d237f0a34afc97e0df7 495 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 462 4.7E-179 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 JV59_35920 7d039e2d88ed6d237f0a34afc97e0df7 495 Gene3D G3DSA:3.30.300.20 382 464 1.0E-19 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JV59_35920 7d039e2d88ed6d237f0a34afc97e0df7 495 SUPERFAMILY SSF52540 4 168 2.22E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_35920 7d039e2d88ed6d237f0a34afc97e0df7 495 SMART SM00382 1 173 2.3 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_35920 7d039e2d88ed6d237f0a34afc97e0df7 495 SMART SM00382 205 348 0.045 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_35920 7d039e2d88ed6d237f0a34afc97e0df7 495 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.7E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JV59_35920 7d039e2d88ed6d237f0a34afc97e0df7 495 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 6.7E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JV59_35920 7d039e2d88ed6d237f0a34afc97e0df7 495 Hamap MF_00195 GTPase Der [der]. 2 465 39.089 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 JV59_37960 d08392046ffb11b215dea3b08dbf9415 598 SUPERFAMILY SSF51735 401 530 5.8E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_37960 d08392046ffb11b215dea3b08dbf9415 598 Pfam PF00999 Sodium/hydrogen exchanger family 12 371 1.0E-64 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 JV59_37960 d08392046ffb11b215dea3b08dbf9415 598 Gene3D G3DSA:3.40.50.720 398 560 6.9E-35 T 14-10-2018 JV59_37960 d08392046ffb11b215dea3b08dbf9415 598 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 282 8.5E-81 T 14-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 JV59_37960 d08392046ffb11b215dea3b08dbf9415 598 Pfam PF02254 TrkA-N domain 402 513 9.3E-22 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 JV59_37960 d08392046ffb11b215dea3b08dbf9415 598 Gene3D G3DSA:1.20.1530.20 4 384 4.2E-83 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily JV59_37960 d08392046ffb11b215dea3b08dbf9415 598 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 3 598 48.197 T 14-10-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 JV59_31960 b14189fe552055e4d6703bbedf011f66 160 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 10 140 7.6E-29 T 14-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN JV59_31960 b14189fe552055e4d6703bbedf011f66 160 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 6 141 1.2E-30 T 14-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN JV59_31960 b14189fe552055e4d6703bbedf011f66 160 Gene3D G3DSA:2.60.40.4150 23 151 3.1E-25 T 14-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily JV59_20585 9c58294147a18607822f84d3575ccd18 106 SUPERFAMILY SSF88697 4 104 9.94E-32 T 14-10-2018 IPR015947 PUA-like superfamily JV59_20585 9c58294147a18607822f84d3575ccd18 106 PIRSF PIRSF029143 2 106 3.6E-43 T 14-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 JV59_20585 9c58294147a18607822f84d3575ccd18 106 SMART SM01022 7 105 1.9E-24 T 14-10-2018 IPR007374 ASCH domain JV59_20585 9c58294147a18607822f84d3575ccd18 106 Pfam PF04266 ASCH domain 12 104 3.3E-14 T 14-10-2018 IPR007374 ASCH domain JV59_20585 9c58294147a18607822f84d3575ccd18 106 Gene3D G3DSA:2.30.130.30 2 104 1.1E-41 T 14-10-2018 JV59_25985 71a75428dd37c6be98cd96306c14786e 126 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 72 100 - T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JV59_25985 71a75428dd37c6be98cd96306c14786e 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 122 13.507 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JV59_25985 71a75428dd37c6be98cd96306c14786e 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 70 124 1.2E-18 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 JV59_25985 71a75428dd37c6be98cd96306c14786e 126 Gene3D G3DSA:1.20.5.1030 67 123 1.2E-17 T 14-10-2018 IPR038379 SecE superfamily JV59_25985 71a75428dd37c6be98cd96306c14786e 126 PRINTS PR01650 Bacterial translocase SecE signature 110 126 5.9E-41 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 JV59_25985 71a75428dd37c6be98cd96306c14786e 126 PRINTS PR01650 Bacterial translocase SecE signature 66 86 5.9E-41 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 JV59_25985 71a75428dd37c6be98cd96306c14786e 126 PRINTS PR01650 Bacterial translocase SecE signature 45 66 5.9E-41 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 JV59_25985 71a75428dd37c6be98cd96306c14786e 126 PRINTS PR01650 Bacterial translocase SecE signature 90 110 5.9E-41 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 JV59_25985 71a75428dd37c6be98cd96306c14786e 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 71 123 6.8E-22 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JV59_37030 28435f7256d2cdd602ae6ee44bc3f0d1 195 PIRSF PIRSF006806 1 191 2.2E-39 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase JV59_37030 28435f7256d2cdd602ae6ee44bc3f0d1 195 Gene3D G3DSA:3.40.50.10420 2 193 6.3E-58 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily JV59_37030 28435f7256d2cdd602ae6ee44bc3f0d1 195 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 6 188 1.1E-44 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase JV59_37030 28435f7256d2cdd602ae6ee44bc3f0d1 195 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 5 188 3.9E-54 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase JV59_37030 28435f7256d2cdd602ae6ee44bc3f0d1 195 SUPERFAMILY SSF100950 4 194 2.37E-57 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JV59_31975 b20f497d1a095e1da642a4a7a29982fc 1127 Pfam PF06744 Type VI secretion protein IcmF C-terminal 877 1077 2.4E-44 T 14-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal JV59_31975 b20f497d1a095e1da642a4a7a29982fc 1127 Pfam PF14331 ImcF-related N-terminal domain 171 423 8.9E-57 T 14-10-2018 IPR025743 ImcF-related, N-terminal domain JV59_31975 b20f497d1a095e1da642a4a7a29982fc 1127 Pfam PF06761 Intracellular multiplication and human macrophage-killing 492 769 4.3E-34 T 14-10-2018 IPR009612 ImcF-related JV59_31975 b20f497d1a095e1da642a4a7a29982fc 1127 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 17 1125 1.4E-140 T 14-10-2018 IPR017731 Type VI secretion system, IcmF JV59_16270 a9434018c076ff46e0eaf374e8cbf0f8 181 Gene3D G3DSA:2.60.40.420 63 180 6.6E-18 T 14-10-2018 IPR008972 Cupredoxin JV59_16270 a9434018c076ff46e0eaf374e8cbf0f8 181 SUPERFAMILY SSF49503 72 177 1.26E-21 T 14-10-2018 IPR008972 Cupredoxin JV59_39285 9caa6df4dcc241682b6ca28d526942b7 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 JV59_39285 9caa6df4dcc241682b6ca28d526942b7 631 Gene3D G3DSA:1.10.10.1800 459 550 9.8E-31 T 14-10-2018 JV59_39285 9caa6df4dcc241682b6ca28d526942b7 631 SUPERFAMILY SSF51905 5 261 6.65E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_39285 9caa6df4dcc241682b6ca28d526942b7 631 Gene3D G3DSA:3.50.50.60 1 235 2.4E-91 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_39285 9caa6df4dcc241682b6ca28d526942b7 631 Gene3D G3DSA:3.50.50.60 300 458 4.4E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_39285 9caa6df4dcc241682b6ca28d526942b7 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 3.3E-293 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 JV59_39285 9caa6df4dcc241682b6ca28d526942b7 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 JV59_39285 9caa6df4dcc241682b6ca28d526942b7 631 Pfam PF13932 GidA associated domain 403 616 9.5E-75 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 JV59_39285 9caa6df4dcc241682b6ca28d526942b7 631 SMART SM01228 546 617 1.3E-41 T 14-10-2018 JV59_39285 9caa6df4dcc241682b6ca28d526942b7 631 Gene3D G3DSA:1.10.150.570 569 622 7.4E-22 T 14-10-2018 JV59_39285 9caa6df4dcc241682b6ca28d526942b7 631 Pfam PF01134 Glucose inhibited division protein A 8 399 4.6E-170 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 JV59_39285 9caa6df4dcc241682b6ca28d526942b7 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.496 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 JV59_01530 ddfa476f3b8c244b2375828f4898bbd3 161 SUPERFAMILY SSF55083 1 159 3.66E-54 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 JV59_01530 ddfa476f3b8c244b2375828f4898bbd3 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 7.4E-38 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 JV59_01530 ddfa476f3b8c244b2375828f4898bbd3 161 Gene3D G3DSA:3.30.70.560 1 159 1.7E-58 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 JV59_01530 ddfa476f3b8c244b2375828f4898bbd3 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 6.8E-47 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 JV59_01530 ddfa476f3b8c244b2375828f4898bbd3 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 JV59_20210 1445251f4bdd5908fbadc85a4ca500cd 203 SUPERFAMILY SSF52172 1 125 2.85E-25 T 14-10-2018 IPR011006 CheY-like superfamily JV59_20210 1445251f4bdd5908fbadc85a4ca500cd 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 196 1.2E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_20210 1445251f4bdd5908fbadc85a4ca500cd 203 SMART SM00421 140 197 5.0E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_20210 1445251f4bdd5908fbadc85a4ca500cd 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 8.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_20210 1445251f4bdd5908fbadc85a4ca500cd 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 8.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_20210 1445251f4bdd5908fbadc85a4ca500cd 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 8.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_20210 1445251f4bdd5908fbadc85a4ca500cd 203 Gene3D G3DSA:3.40.50.12740 2 201 2.3E-50 T 14-10-2018 JV59_20210 1445251f4bdd5908fbadc85a4ca500cd 203 SMART SM00448 2 112 9.2E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_20210 1445251f4bdd5908fbadc85a4ca500cd 203 SUPERFAMILY SSF46894 125 197 1.09E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_20210 1445251f4bdd5908fbadc85a4ca500cd 203 Pfam PF00072 Response regulator receiver domain 4 113 2.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_20210 1445251f4bdd5908fbadc85a4ca500cd 203 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_02335 1f95fd126ef3e6e6fb082d430c2d7269 847 Gene3D G3DSA:2.60.40.10 429 521 5.4E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_02335 1f95fd126ef3e6e6fb082d430c2d7269 847 SUPERFAMILY SSF51055 18 78 6.54E-13 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_02335 1f95fd126ef3e6e6fb082d430c2d7269 847 Pfam PF00704 Glycosyl hydrolases family 18 525 825 8.0E-26 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 JV59_02335 1f95fd126ef3e6e6fb082d430c2d7269 847 Gene3D G3DSA:2.60.40.10 84 174 2.3E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_02335 1f95fd126ef3e6e6fb082d430c2d7269 847 Gene3D G3DSA:2.60.40.10 178 271 3.1E-28 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_02335 1f95fd126ef3e6e6fb082d430c2d7269 847 Gene3D G3DSA:2.60.40.10 335 427 9.8E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_02335 1f95fd126ef3e6e6fb082d430c2d7269 847 SMART SM00636 523 825 1.0E-4 T 14-10-2018 IPR011583 Chitinase II GO:0008061 JV59_02335 1f95fd126ef3e6e6fb082d430c2d7269 847 SMART SM00495 28 74 1.8E-10 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_02335 1f95fd126ef3e6e6fb082d430c2d7269 847 SMART SM00495 277 326 3.5E-6 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_02335 1f95fd126ef3e6e6fb082d430c2d7269 847 ProSitePatterns PS01095 Chitinases family 18 active site. 637 645 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 JV59_02335 1f95fd126ef3e6e6fb082d430c2d7269 847 SUPERFAMILY SSF51445 522 830 7.54E-48 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_02335 1f95fd126ef3e6e6fb082d430c2d7269 847 Gene3D G3DSA:2.10.10.20 24 78 4.6E-12 T 14-10-2018 JV59_02335 1f95fd126ef3e6e6fb082d430c2d7269 847 Gene3D G3DSA:3.20.20.80 522 842 1.6E-76 T 14-10-2018 JV59_30595 1e0065b1fb620bfbae21c5d992676d0e 293 SUPERFAMILY SSF53807 33 287 3.92E-41 T 14-10-2018 JV59_30595 1e0065b1fb620bfbae21c5d992676d0e 293 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 268 281 8.2E-15 T 14-10-2018 JV59_30595 1e0065b1fb620bfbae21c5d992676d0e 293 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 204 222 8.2E-15 T 14-10-2018 JV59_30595 1e0065b1fb620bfbae21c5d992676d0e 293 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 82 97 8.2E-15 T 14-10-2018 JV59_30595 1e0065b1fb620bfbae21c5d992676d0e 293 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 180 195 8.2E-15 T 14-10-2018 JV59_30595 1e0065b1fb620bfbae21c5d992676d0e 293 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 51 69 8.2E-15 T 14-10-2018 JV59_30595 1e0065b1fb620bfbae21c5d992676d0e 293 Gene3D G3DSA:3.40.50.1980 121 290 3.4E-47 T 14-10-2018 JV59_30595 1e0065b1fb620bfbae21c5d992676d0e 293 Pfam PF01497 Periplasmic binding protein 35 235 5.9E-16 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain JV59_30595 1e0065b1fb620bfbae21c5d992676d0e 293 Gene3D G3DSA:3.40.50.1980 28 118 1.7E-21 T 14-10-2018 JV59_24860 8bde58cd31a0fefdd9be087e4733f54a 144 Pfam PF12802 MarR family 34 90 2.5E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_24860 8bde58cd31a0fefdd9be087e4733f54a 144 Gene3D G3DSA:1.10.10.10 2 144 2.2E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_24860 8bde58cd31a0fefdd9be087e4733f54a 144 SUPERFAMILY SSF46785 10 141 1.34E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_24860 8bde58cd31a0fefdd9be087e4733f54a 144 SMART SM00347 28 127 1.3E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_36600 c1f2624ea929542ee9642559d3bcc090 327 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 327 45.086 T 14-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 JV59_36600 c1f2624ea929542ee9642559d3bcc090 327 SUPERFAMILY SSF51445 2 288 8.11E-84 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_36600 c1f2624ea929542ee9642559d3bcc090 327 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 10 284 1.5E-82 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 JV59_36600 c1f2624ea929542ee9642559d3bcc090 327 Gene3D G3DSA:3.20.20.300 1 327 2.0E-126 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 JV59_36600 c1f2624ea929542ee9642559d3bcc090 327 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 229 246 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 JV59_29750 1481c792170c8cf71e19047f6557af89 249 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 15 237 2.1E-31 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 JV59_29750 1481c792170c8cf71e19047f6557af89 249 Gene3D G3DSA:3.20.20.60 1 249 2.0E-69 T 14-10-2018 JV59_29750 1481c792170c8cf71e19047f6557af89 249 SUPERFAMILY SSF51621 11 245 1.33E-61 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JV59_33555 6c2440ba25b76609f351ca1870b5856a 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 5.6E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_33555 6c2440ba25b76609f351ca1870b5856a 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 79 5.6E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_33555 6c2440ba25b76609f351ca1870b5856a 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 5.6E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_33555 6c2440ba25b76609f351ca1870b5856a 152 SMART SM00347 39 142 1.6E-22 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_33555 6c2440ba25b76609f351ca1870b5856a 152 Pfam PF01047 MarR family 46 103 1.7E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_33555 6c2440ba25b76609f351ca1870b5856a 152 SUPERFAMILY SSF46785 13 151 2.61E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_33555 6c2440ba25b76609f351ca1870b5856a 152 Gene3D G3DSA:1.10.10.10 10 152 5.1E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_39050 a85d47a7fec8da6128a204fca1468ece 377 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 350 5.0E-108 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 JV59_39050 a85d47a7fec8da6128a204fca1468ece 377 Pfam PF02222 ATP-grasp domain 101 274 1.6E-52 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type JV59_39050 a85d47a7fec8da6128a204fca1468ece 377 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 37.03 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 JV59_39050 a85d47a7fec8da6128a204fca1468ece 377 SUPERFAMILY SSF52440 2 88 6.76E-17 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JV59_39050 a85d47a7fec8da6128a204fca1468ece 377 SUPERFAMILY SSF51246 299 368 5.81E-19 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 JV59_39050 a85d47a7fec8da6128a204fca1468ece 377 Gene3D G3DSA:3.30.470.20 165 375 1.0E-74 T 14-10-2018 JV59_39050 a85d47a7fec8da6128a204fca1468ece 377 Gene3D G3DSA:3.40.50.20 1 81 1.6E-19 T 14-10-2018 JV59_39050 a85d47a7fec8da6128a204fca1468ece 377 SUPERFAMILY SSF56059 92 295 2.3E-56 T 14-10-2018 JV59_39050 a85d47a7fec8da6128a204fca1468ece 377 Gene3D G3DSA:3.30.1490.20 107 164 1.4E-15 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JV59_30915 d19bff0a11b991643f3bd6b68d6d18ff 493 SUPERFAMILY SSF51395 19 488 1.65E-125 T 14-10-2018 JV59_30915 d19bff0a11b991643f3bd6b68d6d18ff 493 Pfam PF01645 Conserved region in glutamate synthase 134 461 2.8E-88 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 JV59_30915 d19bff0a11b991643f3bd6b68d6d18ff 493 Gene3D G3DSA:3.20.20.70 126 488 2.2E-105 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_30915 d19bff0a11b991643f3bd6b68d6d18ff 493 PIRSF PIRSF500060 1 493 1.9E-205 T 14-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria JV59_30915 d19bff0a11b991643f3bd6b68d6d18ff 493 PIRSF PIRSF006429 2 493 3.4E-164 T 14-10-2018 IPR024188 Glutamate synthase large subunit-like protein JV59_34795 894be94b6d764aaaa8c93baba1de4280 240 SUPERFAMILY SSF46894 136 233 2.83E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_34795 894be94b6d764aaaa8c93baba1de4280 240 SMART SM00448 3 114 1.4E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_34795 894be94b6d764aaaa8c93baba1de4280 240 Gene3D G3DSA:3.40.50.2300 1 124 3.8E-38 T 14-10-2018 JV59_34795 894be94b6d764aaaa8c93baba1de4280 240 SMART SM00862 156 232 8.3E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_34795 894be94b6d764aaaa8c93baba1de4280 240 Gene3D G3DSA:1.10.10.10 125 236 6.9E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_34795 894be94b6d764aaaa8c93baba1de4280 240 Pfam PF00072 Response regulator receiver domain 5 115 4.5E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_34795 894be94b6d764aaaa8c93baba1de4280 240 SUPERFAMILY SSF52172 2 125 2.56E-42 T 14-10-2018 IPR011006 CheY-like superfamily JV59_34795 894be94b6d764aaaa8c93baba1de4280 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.0E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_31605 849f125dd6bce31c124388c4b5c72262 133 SUPERFAMILY SSF51316 1 121 1.99E-31 T 14-10-2018 IPR011057 Mss4-like superfamily JV59_31605 849f125dd6bce31c124388c4b5c72262 133 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 22 104 2.4E-13 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 JV59_31605 849f125dd6bce31c124388c4b5c72262 133 Gene3D G3DSA:2.170.150.70 1 109 1.3E-13 T 14-10-2018 JV59_33880 dc546db482a254f807b7d57417dc3573 429 SUPERFAMILY SSF51905 165 347 1.49E-23 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_33880 dc546db482a254f807b7d57417dc3573 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 4.0E-6 T 14-10-2018 JV59_33880 dc546db482a254f807b7d57417dc3573 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 4.0E-6 T 14-10-2018 JV59_33880 dc546db482a254f807b7d57417dc3573 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.0E-6 T 14-10-2018 JV59_33880 dc546db482a254f807b7d57417dc3573 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 1.7E-60 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JV59_33880 dc546db482a254f807b7d57417dc3573 429 Gene3D G3DSA:3.50.50.100 1 405 2.0E-113 T 14-10-2018 JV59_33880 dc546db482a254f807b7d57417dc3573 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 2.3E-12 T 14-10-2018 JV59_33880 dc546db482a254f807b7d57417dc3573 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 2.3E-12 T 14-10-2018 JV59_33880 dc546db482a254f807b7d57417dc3573 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 2.3E-12 T 14-10-2018 JV59_33880 dc546db482a254f807b7d57417dc3573 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.3E-12 T 14-10-2018 JV59_33880 dc546db482a254f807b7d57417dc3573 429 SUPERFAMILY SSF51905 3 218 4.35E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_19550 87bfdf6997998ccef246fa5836cdef7f 103 Pfam PF01022 Bacterial regulatory protein, arsR family 27 72 5.9E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_19550 87bfdf6997998ccef246fa5836cdef7f 103 SMART SM00418 20 98 2.2E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_19550 87bfdf6997998ccef246fa5836cdef7f 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 8.2E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_19550 87bfdf6997998ccef246fa5836cdef7f 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 22 37 8.2E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_19550 87bfdf6997998ccef246fa5836cdef7f 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 8.2E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_19550 87bfdf6997998ccef246fa5836cdef7f 103 SUPERFAMILY SSF46785 9 101 7.18E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_19550 87bfdf6997998ccef246fa5836cdef7f 103 Gene3D G3DSA:1.10.10.10 7 103 2.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_02260 4de17c36af3f10c436b42ecc4cba54dd 375 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 375 48.432 T 14-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 JV59_02260 4de17c36af3f10c436b42ecc4cba54dd 375 Pfam PF05175 Methyltransferase small domain 199 372 7.8E-54 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 JV59_02260 4de17c36af3f10c436b42ecc4cba54dd 375 Gene3D G3DSA:3.40.50.150 8 181 1.3E-50 T 14-10-2018 JV59_02260 4de17c36af3f10c436b42ecc4cba54dd 375 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 302 308 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JV59_02260 4de17c36af3f10c436b42ecc4cba54dd 375 PIRSF PIRSF037565 1 375 2.6E-166 T 14-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 JV59_02260 4de17c36af3f10c436b42ecc4cba54dd 375 Gene3D G3DSA:3.40.50.150 187 375 4.3E-46 T 14-10-2018 JV59_02260 4de17c36af3f10c436b42ecc4cba54dd 375 SUPERFAMILY SSF53335 190 353 1.81E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_25585 e19efd8b6e6ea51fc5df2967431104c9 340 SUPERFAMILY SSF52440 51 123 1.15E-9 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JV59_25585 e19efd8b6e6ea51fc5df2967431104c9 340 Pfam PF01820 D-ala D-ala ligase N-terminus 78 114 1.5E-6 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JV59_25585 e19efd8b6e6ea51fc5df2967431104c9 340 Gene3D G3DSA:3.40.50.20 23 129 7.5E-10 T 14-10-2018 JV59_25585 e19efd8b6e6ea51fc5df2967431104c9 340 Gene3D G3DSA:3.30.470.20 208 332 7.6E-7 T 14-10-2018 JV59_28645 d8fd59a3e3f3bee84531127de6803cfa 258 SUPERFAMILY SSF48452 141 253 2.06E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_28645 d8fd59a3e3f3bee84531127de6803cfa 258 SMART SM00028 214 247 0.82 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_28645 d8fd59a3e3f3bee84531127de6803cfa 258 SMART SM00028 178 211 16.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_28645 d8fd59a3e3f3bee84531127de6803cfa 258 Pfam PF13432 Tetratricopeptide repeat 152 202 6.4E-9 T 14-10-2018 JV59_28645 d8fd59a3e3f3bee84531127de6803cfa 258 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 5 258 17.215 T 14-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 JV59_28645 d8fd59a3e3f3bee84531127de6803cfa 258 Gene3D G3DSA:1.20.5.110 44 121 1.1E-21 T 14-10-2018 JV59_28645 d8fd59a3e3f3bee84531127de6803cfa 258 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 141 256 4.1E-38 T 14-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal JV59_28645 d8fd59a3e3f3bee84531127de6803cfa 258 Pfam PF13174 Tetratricopeptide repeat 215 247 2.5E-7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_28645 d8fd59a3e3f3bee84531127de6803cfa 258 Gene3D G3DSA:1.25.40.10 140 258 2.1E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_28645 d8fd59a3e3f3bee84531127de6803cfa 258 Pfam PF16331 TolA binding protein trimerisation 47 118 5.5E-23 T 14-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 JV59_01550 3b9a84596c939f07dbe3ee9237dd57cf 237 Gene3D G3DSA:3.40.1350.60 81 236 2.7E-57 T 14-10-2018 JV59_01550 3b9a84596c939f07dbe3ee9237dd57cf 237 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 237 57.64 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein JV59_01550 3b9a84596c939f07dbe3ee9237dd57cf 237 Pfam PF03749 Sugar fermentation stimulation protein 13 228 5.7E-77 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein JV59_01550 3b9a84596c939f07dbe3ee9237dd57cf 237 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 2 229 2.5E-79 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein JV59_01550 3b9a84596c939f07dbe3ee9237dd57cf 237 Gene3D G3DSA:2.40.50.580 1 80 1.3E-27 T 14-10-2018 JV59_23690 acc062fdfcf0a696e4dcc8634973d9e9 454 Gene3D G3DSA:1.10.340.30 313 411 6.3E-16 T 14-10-2018 JV59_23690 acc062fdfcf0a696e4dcc8634973d9e9 454 SUPERFAMILY SSF48150 302 451 5.23E-26 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 JV59_23690 acc062fdfcf0a696e4dcc8634973d9e9 454 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 141 183 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JV59_23690 acc062fdfcf0a696e4dcc8634973d9e9 454 Gene3D G3DSA:3.30.310.20 199 312 3.8E-26 T 14-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily JV59_23690 acc062fdfcf0a696e4dcc8634973d9e9 454 SUPERFAMILY SSF55945 200 294 2.51E-25 T 14-10-2018 JV59_23690 acc062fdfcf0a696e4dcc8634973d9e9 454 Pfam PF12833 Helix-turn-helix domain 110 188 2.2E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_23690 acc062fdfcf0a696e4dcc8634973d9e9 454 SUPERFAMILY SSF46689 142 190 2.06E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_23690 acc062fdfcf0a696e4dcc8634973d9e9 454 Pfam PF02805 Metal binding domain of Ada 12 75 1.6E-29 T 14-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 JV59_23690 acc062fdfcf0a696e4dcc8634973d9e9 454 Gene3D G3DSA:3.40.10.10 4 77 6.5E-29 T 14-10-2018 IPR035451 Ada-like domain superfamily JV59_23690 acc062fdfcf0a696e4dcc8634973d9e9 454 Gene3D G3DSA:1.10.10.60 84 193 1.9E-25 T 14-10-2018 JV59_23690 acc062fdfcf0a696e4dcc8634973d9e9 454 SMART SM00342 104 187 4.3E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_23690 acc062fdfcf0a696e4dcc8634973d9e9 454 Pfam PF06029 AlkA N-terminal domain 200 312 6.8E-35 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal JV59_23690 acc062fdfcf0a696e4dcc8634973d9e9 454 SMART SM01009 199 312 6.8E-35 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal JV59_23690 acc062fdfcf0a696e4dcc8634973d9e9 454 SUPERFAMILY SSF46689 90 136 7.79E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_23690 acc062fdfcf0a696e4dcc8634973d9e9 454 SUPERFAMILY SSF57884 8 90 9.29E-33 T 14-10-2018 IPR035451 Ada-like domain superfamily JV59_19410 710a2449998411cf41ed9cadd16309ac 419 Gene3D G3DSA:3.30.70.420 146 261 1.8E-110 T 14-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 JV59_19410 710a2449998411cf41ed9cadd16309ac 419 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 53 419 4.3E-112 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 JV59_19410 710a2449998411cf41ed9cadd16309ac 419 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 356 363 - T 14-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 JV59_19410 710a2449998411cf41ed9cadd16309ac 419 SUPERFAMILY SSF56542 26 409 1.7E-76 T 14-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 JV59_19410 710a2449998411cf41ed9cadd16309ac 419 Gene3D G3DSA:3.90.770.10 92 405 1.8E-110 T 14-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 JV59_19410 710a2449998411cf41ed9cadd16309ac 419 SUPERFAMILY SSF55035 146 261 1.31E-37 T 14-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 JV59_19410 710a2449998411cf41ed9cadd16309ac 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 344 365 3.7E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 JV59_19410 710a2449998411cf41ed9cadd16309ac 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 242 267 3.7E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 JV59_19410 710a2449998411cf41ed9cadd16309ac 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 81 102 3.7E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 JV59_19410 710a2449998411cf41ed9cadd16309ac 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 291 317 3.7E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 JV59_19410 710a2449998411cf41ed9cadd16309ac 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 201 219 3.7E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 JV59_19410 710a2449998411cf41ed9cadd16309ac 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 112 132 3.7E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 JV59_24015 ac30e315e8cd70a75533bdb703d859ce 425 Gene3D G3DSA:1.10.3210.10 13 196 2.3E-18 T 14-10-2018 JV59_24015 ac30e315e8cd70a75533bdb703d859ce 425 SMART SM00471 241 376 5.6E-8 T 14-10-2018 IPR003607 HD/PDEase domain JV59_24015 ac30e315e8cd70a75533bdb703d859ce 425 SMART SM00471 26 155 19.0 T 14-10-2018 IPR003607 HD/PDEase domain JV59_24015 ac30e315e8cd70a75533bdb703d859ce 425 Pfam PF01966 HD domain 245 366 1.3E-16 T 14-10-2018 IPR006674 HD domain JV59_24015 ac30e315e8cd70a75533bdb703d859ce 425 SUPERFAMILY SSF109604 20 192 1.45E-17 T 14-10-2018 JV59_24015 ac30e315e8cd70a75533bdb703d859ce 425 SUPERFAMILY SSF109604 236 402 1.51E-31 T 14-10-2018 JV59_24015 ac30e315e8cd70a75533bdb703d859ce 425 Gene3D G3DSA:1.10.3210.10 227 415 1.9E-50 T 14-10-2018 JV59_25530 d7913fb6015bf3835aff71eae764dab9 366 ProSitePatterns PS00677 D-amino acid oxidases signature. 336 354 - T 14-10-2018 IPR006181 D-amino acid oxidase, conserved site GO:0003884|GO:0055114 Reactome: R-HSA-389661|Reactome: R-HSA-9033241 JV59_25530 d7913fb6015bf3835aff71eae764dab9 366 Gene3D G3DSA:3.30.9.10 95 321 1.9E-57 T 14-10-2018 JV59_25530 d7913fb6015bf3835aff71eae764dab9 366 Pfam PF01266 FAD dependent oxidoreductase 10 358 3.3E-26 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JV59_25530 d7913fb6015bf3835aff71eae764dab9 366 SUPERFAMILY SSF51971 9 361 2.18E-17 T 14-10-2018 JV59_25530 d7913fb6015bf3835aff71eae764dab9 366 PIRSF PIRSF000189 7 366 4.9E-64 T 14-10-2018 IPR023209 D-amino-acid oxidase GO:0003884|GO:0046416|GO:0071949 Reactome: R-HSA-389661|Reactome: R-HSA-9033241 JV59_25530 d7913fb6015bf3835aff71eae764dab9 366 Gene3D G3DSA:3.40.50.720 12 358 1.9E-57 T 14-10-2018 JV59_18240 7eb5e16ad6865b98e61a28c2faa58950 284 PIRSF PIRSF015558 1 284 4.9E-72 T 14-10-2018 IPR016634 WYL domain protein, s026 type JV59_18240 7eb5e16ad6865b98e61a28c2faa58950 284 Pfam PF13280 WYL domain 125 208 2.3E-7 T 14-10-2018 IPR026881 WYL domain JV59_19485 336ff27fddf9f0472bb46ed085100d30 409 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 65 76 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JV59_19485 336ff27fddf9f0472bb46ed085100d30 409 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 13 407 3.5E-215 T 14-10-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0009061|GO:0016020 JV59_19485 336ff27fddf9f0472bb46ed085100d30 409 Pfam PF02754 Cysteine-rich domain 305 388 5.7E-13 T 14-10-2018 IPR004017 Cysteine-rich domain JV59_19485 336ff27fddf9f0472bb46ed085100d30 409 Pfam PF02754 Cysteine-rich domain 176 261 3.1E-16 T 14-10-2018 IPR004017 Cysteine-rich domain JV59_19485 336ff27fddf9f0472bb46ed085100d30 409 Gene3D G3DSA:1.10.1060.10 2 98 6.3E-9 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JV59_19485 336ff27fddf9f0472bb46ed085100d30 409 SUPERFAMILY SSF46548 11 97 2.27E-17 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JV59_19485 336ff27fddf9f0472bb46ed085100d30 409 Pfam PF13183 4Fe-4S dicluster domain 15 79 6.2E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JV59_00315 c39e861fef43082a960666ac48498fee 351 Pfam PF03193 RsgA GTPase 99 274 8.5E-59 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 JV59_00315 c39e861fef43082a960666ac48498fee 351 Gene3D G3DSA:1.10.40.50 274 348 6.7E-26 T 14-10-2018 JV59_00315 c39e861fef43082a960666ac48498fee 351 Gene3D G3DSA:3.40.50.300 102 273 1.2E-51 T 14-10-2018 JV59_00315 c39e861fef43082a960666ac48498fee 351 SUPERFAMILY SSF52540 113 336 7.53E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_00315 c39e861fef43082a960666ac48498fee 351 Gene3D G3DSA:2.40.50.140 35 101 8.3E-23 T 14-10-2018 JV59_00315 c39e861fef43082a960666ac48498fee 351 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 40 338 37.48 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 JV59_00315 c39e861fef43082a960666ac48498fee 351 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 74 332 8.4E-92 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 JV59_00250 d06bb785c4a31cbf3b8de89280c6bc53 1342 Gene3D G3DSA:2.40.50.100 714 788 2.5E-32 T 14-10-2018 JV59_00250 d06bb785c4a31cbf3b8de89280c6bc53 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 7.3E-29 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_00250 d06bb785c4a31cbf3b8de89280c6bc53 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 2.9E-57 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_00250 d06bb785c4a31cbf3b8de89280c6bc53 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_00250 d06bb785c4a31cbf3b8de89280c6bc53 1342 Gene3D G3DSA:3.90.1100.10 647 713 7.4E-21 T 14-10-2018 JV59_00250 d06bb785c4a31cbf3b8de89280c6bc53 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 3.7E-157 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_00250 d06bb785c4a31cbf3b8de89280c6bc53 1342 Gene3D G3DSA:2.40.270.10 1035 1241 1.6E-88 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_00250 d06bb785c4a31cbf3b8de89280c6bc53 1342 Gene3D G3DSA:2.40.50.150 833 954 3.4E-44 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_00250 d06bb785c4a31cbf3b8de89280c6bc53 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 3.1E-23 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_00250 d06bb785c4a31cbf3b8de89280c6bc53 1342 SUPERFAMILY SSF64484 11 1341 0.0 T 14-10-2018 JV59_00250 d06bb785c4a31cbf3b8de89280c6bc53 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 3.0E-27 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_00250 d06bb785c4a31cbf3b8de89280c6bc53 1342 Gene3D G3DSA:3.90.1100.10 407 633 2.5E-71 T 14-10-2018 JV59_00250 d06bb785c4a31cbf3b8de89280c6bc53 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_00250 d06bb785c4a31cbf3b8de89280c6bc53 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 223 1.2E-7 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_00250 d06bb785c4a31cbf3b8de89280c6bc53 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 346 454 1.1E-15 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_00250 d06bb785c4a31cbf3b8de89280c6bc53 1342 Gene3D G3DSA:3.90.1800.10 1251 1305 8.1E-11 T 14-10-2018 JV59_00250 d06bb785c4a31cbf3b8de89280c6bc53 1342 Gene3D G3DSA:3.90.1110.10 157 263 5.6E-28 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_00250 d06bb785c4a31cbf3b8de89280c6bc53 1342 Gene3D G3DSA:3.90.1100.10 19 156 2.0E-48 T 14-10-2018 JV59_00250 d06bb785c4a31cbf3b8de89280c6bc53 1342 Gene3D G3DSA:2.40.270.10 790 832 1.1E-6 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_00250 d06bb785c4a31cbf3b8de89280c6bc53 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.307 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_28540 ba3223afe6935ba3160bf8bb184dcfec 820 Gene3D G3DSA:3.40.228.10 179 641 7.6E-241 T 14-10-2018 JV59_28540 ba3223afe6935ba3160bf8bb184dcfec 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 8.3E-24 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 JV59_28540 ba3223afe6935ba3160bf8bb184dcfec 820 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 29 3.5E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal JV59_28540 ba3223afe6935ba3160bf8bb184dcfec 820 Gene3D G3DSA:3.40.50.740 87 569 7.6E-241 T 14-10-2018 JV59_28540 ba3223afe6935ba3160bf8bb184dcfec 820 SUPERFAMILY SSF53706 42 660 1.44E-166 T 14-10-2018 JV59_28540 ba3223afe6935ba3160bf8bb184dcfec 820 Pfam PF00384 Molybdopterin oxidoreductase 87 560 1.2E-79 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_28540 ba3223afe6935ba3160bf8bb184dcfec 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 JV59_28540 ba3223afe6935ba3160bf8bb184dcfec 820 Gene3D G3DSA:2.40.40.20 649 813 3.1E-47 T 14-10-2018 JV59_28540 ba3223afe6935ba3160bf8bb184dcfec 820 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 819 0.0 T 14-10-2018 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 JV59_28540 ba3223afe6935ba3160bf8bb184dcfec 820 SUPERFAMILY SSF50692 669 817 2.28E-42 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily JV59_28540 ba3223afe6935ba3160bf8bb184dcfec 820 Gene3D G3DSA:3.90.55.10 81 615 7.6E-241 T 14-10-2018 JV59_01735 6881b3abcf86f955ac75b64e3abccc22 276 Pfam PF00809 Pterin binding enzyme 18 257 4.7E-89 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JV59_01735 6881b3abcf86f955ac75b64e3abccc22 276 Gene3D G3DSA:3.20.20.20 1 276 9.2E-113 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JV59_01735 6881b3abcf86f955ac75b64e3abccc22 276 SUPERFAMILY SSF51717 2 274 4.45E-104 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JV59_01735 6881b3abcf86f955ac75b64e3abccc22 276 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JV59_01735 6881b3abcf86f955ac75b64e3abccc22 276 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JV59_01735 6881b3abcf86f955ac75b64e3abccc22 276 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 16 271 5.0E-102 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 JV59_29200 1ade8a9dfe3ab6c68d2e9decf90eba96 214 Gene3D G3DSA:3.40.50.12740 2 209 1.4E-58 T 14-10-2018 JV59_29200 1ade8a9dfe3ab6c68d2e9decf90eba96 214 SUPERFAMILY SSF52172 3 132 3.7E-33 T 14-10-2018 IPR011006 CheY-like superfamily JV59_29200 1ade8a9dfe3ab6c68d2e9decf90eba96 214 Pfam PF00072 Response regulator receiver domain 4 116 1.1E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_29200 1ade8a9dfe3ab6c68d2e9decf90eba96 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_29200 1ade8a9dfe3ab6c68d2e9decf90eba96 214 SMART SM00448 2 115 2.2E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_29200 1ade8a9dfe3ab6c68d2e9decf90eba96 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_29200 1ade8a9dfe3ab6c68d2e9decf90eba96 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_29200 1ade8a9dfe3ab6c68d2e9decf90eba96 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_29200 1ade8a9dfe3ab6c68d2e9decf90eba96 214 SMART SM00421 146 203 1.6E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_29200 1ade8a9dfe3ab6c68d2e9decf90eba96 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 2.7E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_29200 1ade8a9dfe3ab6c68d2e9decf90eba96 214 SUPERFAMILY SSF46894 135 210 9.18E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_39500 3600c5136f636e7438da7bf7c21fdbab 397 ProSitePatterns PS00216 Sugar transport proteins signature 1. 67 83 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JV59_39500 3600c5136f636e7438da7bf7c21fdbab 397 Pfam PF07690 Major Facilitator Superfamily 18 354 1.9E-46 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_39500 3600c5136f636e7438da7bf7c21fdbab 397 Gene3D G3DSA:1.20.1720.10 14 387 6.9E-90 T 14-10-2018 JV59_39500 3600c5136f636e7438da7bf7c21fdbab 397 SUPERFAMILY SSF103473 12 389 5.75E-60 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_39500 3600c5136f636e7438da7bf7c21fdbab 397 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 11 377 5.3E-69 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 JV59_16275 7a9b3c0f2efb440a30456d6400fd2bb6 1042 Gene3D G3DSA:1.20.1640.10 510 1030 1.0E-273 T 14-10-2018 JV59_16275 7a9b3c0f2efb440a30456d6400fd2bb6 1042 SUPERFAMILY SSF82693 46 127 2.62E-20 T 14-10-2018 JV59_16275 7a9b3c0f2efb440a30456d6400fd2bb6 1042 SUPERFAMILY SSF82714 185 269 2.09E-18 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_16275 7a9b3c0f2efb440a30456d6400fd2bb6 1042 Gene3D G3DSA:3.30.70.1440 663 860 1.0E-273 T 14-10-2018 JV59_16275 7a9b3c0f2efb440a30456d6400fd2bb6 1042 Gene3D G3DSA:3.30.70.1430 560 662 1.0E-273 T 14-10-2018 JV59_16275 7a9b3c0f2efb440a30456d6400fd2bb6 1042 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1037 0.0 T 14-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 JV59_16275 7a9b3c0f2efb440a30456d6400fd2bb6 1042 Gene3D G3DSA:3.30.2090.10 181 272 1.0E-273 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_16275 7a9b3c0f2efb440a30456d6400fd2bb6 1042 Gene3D G3DSA:1.20.1640.10 12 509 1.0E-273 T 14-10-2018 JV59_16275 7a9b3c0f2efb440a30456d6400fd2bb6 1042 SUPERFAMILY SSF82866 294 498 1.57E-42 T 14-10-2018 JV59_16275 7a9b3c0f2efb440a30456d6400fd2bb6 1042 SUPERFAMILY SSF82714 716 800 2.62E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_16275 7a9b3c0f2efb440a30456d6400fd2bb6 1042 Gene3D G3DSA:3.30.70.1430 42 810 1.0E-273 T 14-10-2018 JV59_16275 7a9b3c0f2efb440a30456d6400fd2bb6 1042 Gene3D G3DSA:3.30.2090.10 714 802 1.0E-273 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_16275 7a9b3c0f2efb440a30456d6400fd2bb6 1042 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 4.2E-248 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_16275 7a9b3c0f2efb440a30456d6400fd2bb6 1042 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 1.9E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_16275 7a9b3c0f2efb440a30456d6400fd2bb6 1042 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.9E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_16275 7a9b3c0f2efb440a30456d6400fd2bb6 1042 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.9E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_16275 7a9b3c0f2efb440a30456d6400fd2bb6 1042 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.9E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_16275 7a9b3c0f2efb440a30456d6400fd2bb6 1042 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 1.9E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_16275 7a9b3c0f2efb440a30456d6400fd2bb6 1042 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.9E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_16275 7a9b3c0f2efb440a30456d6400fd2bb6 1042 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 1.9E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_16275 7a9b3c0f2efb440a30456d6400fd2bb6 1042 SUPERFAMILY SSF82866 798 1037 1.16E-50 T 14-10-2018 JV59_16275 7a9b3c0f2efb440a30456d6400fd2bb6 1042 Gene3D G3DSA:3.30.70.1320 135 330 1.0E-273 T 14-10-2018 JV59_16275 7a9b3c0f2efb440a30456d6400fd2bb6 1042 SUPERFAMILY SSF82693 137 328 2.88E-22 T 14-10-2018 JV59_00300 dc177d33aefcfac4d98c5b8a1958b640 626 Gene3D G3DSA:3.30.450.20 64 167 8.9E-54 T 14-10-2018 JV59_00300 dc177d33aefcfac4d98c5b8a1958b640 626 Pfam PF02743 Cache domain 39 258 1.9E-25 T 14-10-2018 IPR033479 Double Cache domain 1 JV59_00300 dc177d33aefcfac4d98c5b8a1958b640 626 SUPERFAMILY SSF103190 63 176 3.14E-11 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JV59_00300 dc177d33aefcfac4d98c5b8a1958b640 626 SUPERFAMILY SSF58104 317 626 1.7E-75 T 14-10-2018 JV59_00300 dc177d33aefcfac4d98c5b8a1958b640 626 Pfam PF00672 HAMP domain 296 344 3.2E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_00300 dc177d33aefcfac4d98c5b8a1958b640 626 SMART SM00283 364 625 3.7E-68 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_00300 dc177d33aefcfac4d98c5b8a1958b640 626 Gene3D G3DSA:3.30.450.20 51 269 8.9E-54 T 14-10-2018 JV59_00300 dc177d33aefcfac4d98c5b8a1958b640 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 414 590 9.5E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_00300 dc177d33aefcfac4d98c5b8a1958b640 626 SMART SM00304 295 349 3.6E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_00300 dc177d33aefcfac4d98c5b8a1958b640 626 Gene3D G3DSA:1.10.287.950 294 626 4.9E-71 T 14-10-2018 JV59_01060 62bd87d9881cc24ecbd8719514f16eda 344 SMART SM00846 2 159 1.6E-70 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_01060 62bd87d9881cc24ecbd8719514f16eda 344 SUPERFAMILY SSF55347 159 321 1.9E-58 T 14-10-2018 JV59_01060 62bd87d9881cc24ecbd8719514f16eda 344 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 8.7E-31 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_01060 62bd87d9881cc24ecbd8719514f16eda 344 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 180 196 8.7E-31 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_01060 62bd87d9881cc24ecbd8719514f16eda 344 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 276 291 8.7E-31 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_01060 62bd87d9881cc24ecbd8719514f16eda 344 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 153 171 8.7E-31 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_01060 62bd87d9881cc24ecbd8719514f16eda 344 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 236 253 8.7E-31 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_01060 62bd87d9881cc24ecbd8719514f16eda 344 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 341 65.664 T 14-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 JV59_01060 62bd87d9881cc24ecbd8719514f16eda 344 SUPERFAMILY SSF51735 2 185 1.98E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_01060 62bd87d9881cc24ecbd8719514f16eda 344 Gene3D G3DSA:3.30.360.10 158 322 2.2E-127 T 14-10-2018 JV59_01060 62bd87d9881cc24ecbd8719514f16eda 344 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 164 320 3.2E-55 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_01060 62bd87d9881cc24ecbd8719514f16eda 344 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 109 4.8E-31 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_01060 62bd87d9881cc24ecbd8719514f16eda 344 Gene3D G3DSA:3.40.50.720 3 332 2.2E-127 T 14-10-2018 JV59_01060 62bd87d9881cc24ecbd8719514f16eda 344 PIRSF PIRSF000149 1 341 6.4E-126 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_01060 62bd87d9881cc24ecbd8719514f16eda 344 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 332 1.8E-189 T 14-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 JV59_22705 15a6ef876e33dc4ca5f3890dfebe65d4 387 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 194 349 8.7E-18 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JV59_22705 15a6ef876e33dc4ca5f3890dfebe65d4 387 Gene3D G3DSA:3.40.50.300 1 111 2.2E-9 T 14-10-2018 JV59_22705 15a6ef876e33dc4ca5f3890dfebe65d4 387 Pfam PF13175 AAA ATPase domain 1 48 2.8E-9 T 14-10-2018 JV59_22705 15a6ef876e33dc4ca5f3890dfebe65d4 387 SUPERFAMILY SSF52540 2 354 9.5E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_22705 15a6ef876e33dc4ca5f3890dfebe65d4 387 Gene3D G3DSA:3.40.50.300 226 369 6.1E-9 T 14-10-2018 JV59_22705 15a6ef876e33dc4ca5f3890dfebe65d4 387 PIRSF PIRSF029347 1 387 1.5E-159 T 14-10-2018 IPR014555 RecF-like JV59_17780 b6df66b7c3288e5853d0713fb580491b 155 Pfam PF10517 Electron transfer DM13 59 153 6.5E-20 T 14-10-2018 IPR019545 DM13 domain JV59_37420 7b81138040a049cdc92635b60de4106c 246 SUPERFAMILY SSF69593 4 235 1.96E-56 T 14-10-2018 JV59_37420 7b81138040a049cdc92635b60de4106c 246 Pfam PF01553 Acyltransferase 59 180 1.4E-31 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JV59_37420 7b81138040a049cdc92635b60de4106c 246 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 2.5E-42 T 14-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 JV59_37420 7b81138040a049cdc92635b60de4106c 246 SMART SM00563 67 182 6.4E-40 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JV59_28570 73bbcc43549155f00cd7eac08da30c27 579 Pfam PF02065 Melibiase 162 352 4.8E-18 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 JV59_28570 73bbcc43549155f00cd7eac08da30c27 579 SUPERFAMILY SSF51445 191 527 2.47E-77 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_28570 73bbcc43549155f00cd7eac08da30c27 579 Gene3D G3DSA:3.20.20.70 188 494 5.0E-93 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_31045 14e7712e4bfe7406cfda9ec71a1dd37b 264 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 125 260 4.3E-21 T 14-10-2018 IPR000160 GGDEF domain JV59_31045 14e7712e4bfe7406cfda9ec71a1dd37b 264 Pfam PF00990 Diguanylate cyclase, GGDEF domain 127 258 4.3E-20 T 14-10-2018 IPR000160 GGDEF domain JV59_31045 14e7712e4bfe7406cfda9ec71a1dd37b 264 SMART SM00267 116 264 3.0E-16 T 14-10-2018 IPR000160 GGDEF domain JV59_31045 14e7712e4bfe7406cfda9ec71a1dd37b 264 SUPERFAMILY SSF55073 132 259 3.3E-24 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_31045 14e7712e4bfe7406cfda9ec71a1dd37b 264 Gene3D G3DSA:3.30.70.270 116 263 6.4E-28 T 14-10-2018 JV59_19175 bd8ba3c5ef1fb32975bd64239847ee02 624 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 431 588 4.1E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_19175 bd8ba3c5ef1fb32975bd64239847ee02 624 Gene3D G3DSA:3.30.450.20 32 183 1.0E-10 T 14-10-2018 JV59_19175 bd8ba3c5ef1fb32975bd64239847ee02 624 Pfam PF02743 Cache domain 56 225 3.8E-17 T 14-10-2018 IPR033479 Double Cache domain 1 JV59_19175 bd8ba3c5ef1fb32975bd64239847ee02 624 SMART SM00283 361 622 9.7E-67 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_19175 bd8ba3c5ef1fb32975bd64239847ee02 624 Gene3D G3DSA:1.10.287.950 297 624 2.4E-60 T 14-10-2018 JV59_19175 bd8ba3c5ef1fb32975bd64239847ee02 624 SUPERFAMILY SSF58104 336 623 6.89E-63 T 14-10-2018 JV59_19175 bd8ba3c5ef1fb32975bd64239847ee02 624 SUPERFAMILY SSF103190 90 181 1.73E-5 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JV59_36505 2a138ed9052a4ca66d5ff31624b021e3 857 Gene3D G3DSA:3.40.50.300 343 544 1.0E-66 T 14-10-2018 JV59_36505 2a138ed9052a4ca66d5ff31624b021e3 857 SMART SM00382 597 748 1.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_36505 2a138ed9052a4ca66d5ff31624b021e3 857 SMART SM00382 198 343 5.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_36505 2a138ed9052a4ca66d5ff31624b021e3 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 2.3E-57 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JV59_36505 2a138ed9052a4ca66d5ff31624b021e3 857 SMART SM01086 766 855 4.1E-36 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JV59_36505 2a138ed9052a4ca66d5ff31624b021e3 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 JV59_36505 2a138ed9052a4ca66d5ff31624b021e3 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 3.1E-11 T 14-10-2018 IPR004176 Clp, N-terminal JV59_36505 2a138ed9052a4ca66d5ff31624b021e3 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 2.0E-12 T 14-10-2018 IPR004176 Clp, N-terminal JV59_36505 2a138ed9052a4ca66d5ff31624b021e3 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 JV59_36505 2a138ed9052a4ca66d5ff31624b021e3 857 SUPERFAMILY SSF52540 546 851 3.25E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_36505 2a138ed9052a4ca66d5ff31624b021e3 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JV59_36505 2a138ed9052a4ca66d5ff31624b021e3 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JV59_36505 2a138ed9052a4ca66d5ff31624b021e3 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JV59_36505 2a138ed9052a4ca66d5ff31624b021e3 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JV59_36505 2a138ed9052a4ca66d5ff31624b021e3 857 Gene3D G3DSA:3.40.50.300 550 764 3.8E-89 T 14-10-2018 JV59_36505 2a138ed9052a4ca66d5ff31624b021e3 857 Gene3D G3DSA:1.10.1780.10 1 147 1.9E-30 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 JV59_36505 2a138ed9052a4ca66d5ff31624b021e3 857 Gene3D G3DSA:1.10.8.60 766 857 4.7E-26 T 14-10-2018 JV59_36505 2a138ed9052a4ca66d5ff31624b021e3 857 SUPERFAMILY SSF52540 159 545 1.59E-101 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_36505 2a138ed9052a4ca66d5ff31624b021e3 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 JV59_36505 2a138ed9052a4ca66d5ff31624b021e3 857 Gene3D G3DSA:3.40.50.300 148 342 2.1E-75 T 14-10-2018 JV59_36505 2a138ed9052a4ca66d5ff31624b021e3 857 SUPERFAMILY SSF81923 4 156 5.0E-42 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 JV59_36505 2a138ed9052a4ca66d5ff31624b021e3 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 5.5E-27 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JV59_36505 2a138ed9052a4ca66d5ff31624b021e3 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 335 1.5E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JV59_39090 4dfc681eb6141dc800ecbb3675d5fb00 481 Pfam PF02386 Cation transport protein 60 475 2.7E-50 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 JV59_39090 4dfc681eb6141dc800ecbb3675d5fb00 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 2.1E-115 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 JV59_39090 4dfc681eb6141dc800ecbb3675d5fb00 481 PIRSF PIRSF006247 1 481 3.1E-166 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 JV59_23015 4e820d71f237ae576d8bc52f6899e3aa 299 SUPERFAMILY SSF103481 42 129 2.62E-5 T 14-10-2018 JV59_23015 4e820d71f237ae576d8bc52f6899e3aa 299 Pfam PF00892 EamA-like transporter family 141 275 3.2E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_23015 4e820d71f237ae576d8bc52f6899e3aa 299 Pfam PF00892 EamA-like transporter family 3 123 2.9E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_23015 4e820d71f237ae576d8bc52f6899e3aa 299 SUPERFAMILY SSF103481 173 270 8.76E-5 T 14-10-2018 JV59_36675 498bc6b104d9a0ce6f7c492f3ae5104f 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 7.6E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_36675 498bc6b104d9a0ce6f7c492f3ae5104f 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 7.6E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_36675 498bc6b104d9a0ce6f7c492f3ae5104f 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 7.6E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_36675 498bc6b104d9a0ce6f7c492f3ae5104f 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 7.6E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_36675 498bc6b104d9a0ce6f7c492f3ae5104f 101 SUPERFAMILY SSF46785 9 96 8.65E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_36675 498bc6b104d9a0ce6f7c492f3ae5104f 101 Gene3D G3DSA:1.10.10.10 1 98 6.2E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_36675 498bc6b104d9a0ce6f7c492f3ae5104f 101 Pfam PF01022 Bacterial regulatory protein, arsR family 23 68 8.4E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_36675 498bc6b104d9a0ce6f7c492f3ae5104f 101 SMART SM00418 15 93 6.1E-29 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_33885 f5d89d649bbcccce686f4d6f2a3f0ae0 180 SUPERFAMILY SSF53474 2 176 7.11E-9 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_33885 f5d89d649bbcccce686f4d6f2a3f0ae0 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 48.136 T 14-10-2018 IPR022987 Uncharacterised protein family UPF0227 JV59_33885 f5d89d649bbcccce686f4d6f2a3f0ae0 180 Gene3D G3DSA:3.40.50.1820 1 179 5.4E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_33885 f5d89d649bbcccce686f4d6f2a3f0ae0 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 3.4E-71 T 14-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA JV59_33845 d9c6b0d81cf6a3b190a5663f5044d43d 228 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 2.0E-109 T 14-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 JV59_33845 d9c6b0d81cf6a3b190a5663f5044d43d 228 SMART SM00382 33 221 1.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_33845 d9c6b0d81cf6a3b190a5663f5044d43d 228 Pfam PF00005 ABC transporter 24 172 8.8E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_33845 d9c6b0d81cf6a3b190a5663f5044d43d 228 SUPERFAMILY SSF52540 4 225 2.0E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_33845 d9c6b0d81cf6a3b190a5663f5044d43d 228 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_33845 d9c6b0d81cf6a3b190a5663f5044d43d 228 Gene3D G3DSA:3.40.50.300 1 227 2.8E-65 T 14-10-2018 JV59_00055 7873783a6c3deaedc33d704cb4a3c972 840 Gene3D G3DSA:2.40.50.140 315 419 1.2E-31 T 14-10-2018 JV59_00055 7873783a6c3deaedc33d704cb4a3c972 840 SUPERFAMILY SSF56601 211 823 7.32E-116 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JV59_00055 7873783a6c3deaedc33d704cb4a3c972 840 Pfam PF00912 Transglycosylase 55 229 1.3E-63 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JV59_00055 7873783a6c3deaedc33d704cb4a3c972 840 Pfam PF17092 Penicillin-binding protein OB-like domain 316 434 2.8E-30 T 14-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JV59_00055 7873783a6c3deaedc33d704cb4a3c972 840 Pfam PF00905 Penicillin binding protein transpeptidase domain 437 643 9.6E-28 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 JV59_00055 7873783a6c3deaedc33d704cb4a3c972 840 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 773 6.9E-169 T 14-10-2018 JV59_00055 7873783a6c3deaedc33d704cb4a3c972 840 Gene3D G3DSA:1.10.3810.10 48 245 2.4E-78 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JV59_00055 7873783a6c3deaedc33d704cb4a3c972 840 SUPERFAMILY SSF53955 43 256 1.91E-78 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily JV59_32195 d94561ef26e7e4b2681fc9fdc13e10fe 323 SUPERFAMILY SSF69279 11 159 5.19E-10 T 14-10-2018 JV59_22605 680f4f74355e19f7640c94dae84c7ba3 640 SUPERFAMILY SSF58104 331 640 2.79E-73 T 14-10-2018 JV59_22605 680f4f74355e19f7640c94dae84c7ba3 640 Pfam PF02743 Cache domain 43 271 3.3E-17 T 14-10-2018 IPR033479 Double Cache domain 1 JV59_22605 680f4f74355e19f7640c94dae84c7ba3 640 SMART SM00304 309 363 3.2E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_22605 680f4f74355e19f7640c94dae84c7ba3 640 Gene3D G3DSA:3.30.450.20 156 285 1.5E-20 T 14-10-2018 JV59_22605 680f4f74355e19f7640c94dae84c7ba3 640 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 446 606 8.3E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_22605 680f4f74355e19f7640c94dae84c7ba3 640 Gene3D G3DSA:1.10.287.950 309 640 2.2E-72 T 14-10-2018 JV59_22605 680f4f74355e19f7640c94dae84c7ba3 640 SMART SM00283 378 639 5.5E-62 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_38475 d7354617cfe1de40fa9b609d1ea5cee4 249 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 169 203 4.3E-4 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_38475 d7354617cfe1de40fa9b609d1ea5cee4 249 SUPERFAMILY SSF51161 12 216 1.36E-14 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JV59_18730 517b8bd005266cd6112c7d007f70ce5f 326 Gene3D G3DSA:1.10.10.60 8 59 1.6E-18 T 14-10-2018 JV59_18730 517b8bd005266cd6112c7d007f70ce5f 326 SUPERFAMILY SSF100950 70 320 1.2E-62 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JV59_18730 517b8bd005266cd6112c7d007f70ce5f 326 Gene3D G3DSA:3.40.50.1360 60 325 1.6E-79 T 14-10-2018 JV59_18730 517b8bd005266cd6112c7d007f70ce5f 326 Pfam PF04198 Putative sugar-binding domain 66 320 2.5E-75 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 JV59_37450 2d37c1dedd9d0e6049a3c7ba43f3cc6f 263 Pfam PF02405 Permease MlaE 48 259 6.1E-76 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 JV59_37450 2d37c1dedd9d0e6049a3c7ba43f3cc6f 263 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 12 261 3.0E-96 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria JV59_20625 500acbcac360feb6f2b702130f53dca4 292 SUPERFAMILY SSF51735 4 166 1.77E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_20625 500acbcac360feb6f2b702130f53dca4 292 SUPERFAMILY SSF48179 166 289 3.51E-38 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JV59_20625 500acbcac360feb6f2b702130f53dca4 292 PIRSF PIRSF000103 1 292 2.4E-78 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 JV59_20625 500acbcac360feb6f2b702130f53dca4 292 Gene3D G3DSA:3.40.50.720 1 166 4.6E-52 T 14-10-2018 JV59_20625 500acbcac360feb6f2b702130f53dca4 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 286 5.7E-31 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 JV59_20625 500acbcac360feb6f2b702130f53dca4 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 163 4.5E-50 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 JV59_20625 500acbcac360feb6f2b702130f53dca4 292 Gene3D G3DSA:1.10.1040.10 167 292 6.7E-37 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JV59_21425 76ccbd637d5bff70288021f154da201d 242 Pfam PF01925 Sulfite exporter TauE/SafE 14 234 1.1E-24 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 JV59_19045 3f606224e903be0e0c444bee3ebddd20 93 Pfam PF10115 Transcriptional activator HlyU 2 92 2.9E-40 T 14-10-2018 IPR018772 Transcription activator HlyU JV59_30030 915916f4ae46ad6122e7f6cd3404f645 132 Gene3D G3DSA:3.10.180.10 3 129 9.6E-45 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_30030 915916f4ae46ad6122e7f6cd3404f645 132 SUPERFAMILY SSF54593 9 127 3.03E-17 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_30030 915916f4ae46ad6122e7f6cd3404f645 132 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 123 2.0E-4 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JV59_26545 70eebf4be03f385686fbedd887c03e97 147 Pfam PF09424 Yqey-like protein 5 146 1.8E-57 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 JV59_26545 70eebf4be03f385686fbedd887c03e97 147 Gene3D G3DSA:1.10.1510.10 1 90 6.6E-28 T 14-10-2018 JV59_26545 70eebf4be03f385686fbedd887c03e97 147 SUPERFAMILY SSF89095 1 146 8.89E-45 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 JV59_26545 70eebf4be03f385686fbedd887c03e97 147 Gene3D G3DSA:1.10.10.410 91 147 2.7E-20 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal JV59_29270 1ce95fcfeea08d9a7c9608424ab924b2 801 Gene3D G3DSA:2.40.50.140 39 154 5.8E-70 T 14-10-2018 JV59_29270 1ce95fcfeea08d9a7c9608424ab924b2 801 Pfam PF01588 Putative tRNA binding domain 45 145 1.4E-25 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 JV59_29270 1ce95fcfeea08d9a7c9608424ab924b2 801 SMART SM00874 403 471 2.1E-29 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 JV59_29270 1ce95fcfeea08d9a7c9608424ab924b2 801 Gene3D G3DSA:3.30.56.10 401 475 1.0E-25 T 14-10-2018 JV59_29270 1ce95fcfeea08d9a7c9608424ab924b2 801 Pfam PF03484 tRNA synthetase B5 domain 406 471 1.1E-18 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 JV59_29270 1ce95fcfeea08d9a7c9608424ab924b2 801 Gene3D G3DSA:3.50.40.10 197 394 1.9E-82 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 JV59_29270 1ce95fcfeea08d9a7c9608424ab924b2 801 SUPERFAMILY SSF55681 467 695 4.32E-48 T 14-10-2018 JV59_29270 1ce95fcfeea08d9a7c9608424ab924b2 801 Gene3D G3DSA:3.30.70.380 708 801 1.6E-29 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 JV59_29270 1ce95fcfeea08d9a7c9608424ab924b2 801 Pfam PF03483 B3/4 domain 212 385 1.6E-70 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 JV59_29270 1ce95fcfeea08d9a7c9608424ab924b2 801 Pfam PF03147 Ferredoxin-fold anticodon binding domain 707 800 1.9E-28 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 JV59_29270 1ce95fcfeea08d9a7c9608424ab924b2 801 SUPERFAMILY SSF50249 38 193 5.43E-47 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_29270 1ce95fcfeea08d9a7c9608424ab924b2 801 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 800 8.8E-274 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 JV59_29270 1ce95fcfeea08d9a7c9608424ab924b2 801 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 794 46.355 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 JV59_29270 1ce95fcfeea08d9a7c9608424ab924b2 801 SUPERFAMILY SSF56037 196 393 7.85E-77 T 14-10-2018 JV59_29270 1ce95fcfeea08d9a7c9608424ab924b2 801 SMART SM00896 707 800 5.5E-45 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 JV59_29270 1ce95fcfeea08d9a7c9608424ab924b2 801 Gene3D G3DSA:3.30.930.10 486 697 8.9E-58 T 14-10-2018 JV59_29270 1ce95fcfeea08d9a7c9608424ab924b2 801 SUPERFAMILY SSF54991 703 800 3.53E-30 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 JV59_29270 1ce95fcfeea08d9a7c9608424ab924b2 801 Gene3D G3DSA:3.30.56.10 7 179 5.8E-70 T 14-10-2018 JV59_29270 1ce95fcfeea08d9a7c9608424ab924b2 801 SUPERFAMILY SSF46955 404 475 7.42E-20 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily JV59_29270 1ce95fcfeea08d9a7c9608424ab924b2 801 SMART SM00873 212 385 3.6E-99 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 JV59_24180 0042de7e60bc963856cbbe60c467d20a 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 233 1.7E-110 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 JV59_24180 0042de7e60bc963856cbbe60c467d20a 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.699 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 JV59_24180 0042de7e60bc963856cbbe60c467d20a 236 Gene3D G3DSA:3.40.50.1580 1 236 3.8E-76 T 14-10-2018 JV59_24180 0042de7e60bc963856cbbe60c467d20a 236 Pfam PF01048 Phosphorylase superfamily 17 222 3.5E-35 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 JV59_24180 0042de7e60bc963856cbbe60c467d20a 236 SUPERFAMILY SSF53167 3 234 3.01E-91 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 JV59_32260 e6216cf90e718a59c672a34fe2038c6c 326 Pfam PF04865 Baseplate J-like protein 116 275 2.8E-8 T 14-10-2018 IPR006949 Baseplate protein J-like JV59_20320 1e4553239a6e8411117e7b36b66a50b2 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.677 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 JV59_20320 1e4553239a6e8411117e7b36b66a50b2 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_20320 1e4553239a6e8411117e7b36b66a50b2 64 Pfam PF01632 Ribosomal protein L35 2 61 5.1E-21 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_20320 1e4553239a6e8411117e7b36b66a50b2 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 4.4E-26 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 JV59_20320 1e4553239a6e8411117e7b36b66a50b2 64 SUPERFAMILY SSF143034 2 63 2.49E-20 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_20320 1e4553239a6e8411117e7b36b66a50b2 64 Gene3D G3DSA:2.40.50.530 4 63 5.1E-18 T 14-10-2018 JV59_20320 1e4553239a6e8411117e7b36b66a50b2 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 5.7E-19 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 JV59_20320 1e4553239a6e8411117e7b36b66a50b2 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 5.7E-19 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 JV59_20320 1e4553239a6e8411117e7b36b66a50b2 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 5.7E-19 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 JV59_38210 13e81fc83cc6f4b61daab8be5c6f6900 530 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 530 2.5E-260 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JV59_38210 13e81fc83cc6f4b61daab8be5c6f6900 530 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 461 6.5E-120 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JV59_38210 13e81fc83cc6f4b61daab8be5c6f6900 530 Gene3D G3DSA:3.40.140.20 394 530 2.2E-59 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JV59_38210 13e81fc83cc6f4b61daab8be5c6f6900 530 SUPERFAMILY SSF52335 7 197 9.29E-72 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily JV59_38210 13e81fc83cc6f4b61daab8be5c6f6900 530 SMART SM00851 19 132 1.9E-61 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain JV59_38210 13e81fc83cc6f4b61daab8be5c6f6900 530 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 530 45.688 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JV59_38210 13e81fc83cc6f4b61daab8be5c6f6900 530 SMART SM00798 137 462 9.2E-219 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JV59_38210 13e81fc83cc6f4b61daab8be5c6f6900 530 PIRSF PIRSF000414 1 530 3.1E-228 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JV59_38210 13e81fc83cc6f4b61daab8be5c6f6900 530 SUPERFAMILY SSF53927 222 530 3.61E-130 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 JV59_38210 13e81fc83cc6f4b61daab8be5c6f6900 530 Gene3D G3DSA:3.40.50.1380 1 200 9.0E-88 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily JV59_38210 13e81fc83cc6f4b61daab8be5c6f6900 530 Gene3D G3DSA:3.40.140.20 219 375 1.1E-58 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JV59_38210 13e81fc83cc6f4b61daab8be5c6f6900 530 Pfam PF02142 MGS-like domain 19 132 4.5E-31 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain JV59_31870 3fb6c30c02c837909da52584ac5742b6 234 SUPERFAMILY SSF46785 18 110 3.24E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_31870 3fb6c30c02c837909da52584ac5742b6 234 Gene3D G3DSA:1.10.10.10 2 79 1.2E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_31870 3fb6c30c02c837909da52584ac5742b6 234 SUPERFAMILY SSF48008 88 225 7.32E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JV59_31870 3fb6c30c02c837909da52584ac5742b6 234 SMART SM00345 24 82 6.0E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_31870 3fb6c30c02c837909da52584ac5742b6 234 SMART SM00895 92 219 3.0E-23 T 14-10-2018 IPR011711 GntR, C-terminal JV59_31870 3fb6c30c02c837909da52584ac5742b6 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 82 3.6E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_31870 3fb6c30c02c837909da52584ac5742b6 234 Gene3D G3DSA:1.20.120.530 80 231 4.0E-28 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JV59_31870 3fb6c30c02c837909da52584ac5742b6 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 5.7E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_31870 3fb6c30c02c837909da52584ac5742b6 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 5.7E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_31870 3fb6c30c02c837909da52584ac5742b6 234 Pfam PF07729 FCD domain 92 217 5.9E-26 T 14-10-2018 IPR011711 GntR, C-terminal JV59_29760 042863865967f312604a9f46d31023a5 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.2E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_29760 042863865967f312604a9f46d31023a5 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.2E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_29760 042863865967f312604a9f46d31023a5 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.2E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_29760 042863865967f312604a9f46d31023a5 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.2E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_29760 042863865967f312604a9f46d31023a5 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.2E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_29760 042863865967f312604a9f46d31023a5 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.2E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_29760 042863865967f312604a9f46d31023a5 244 SUPERFAMILY SSF51735 3 240 2.14E-65 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_29760 042863865967f312604a9f46d31023a5 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 239 6.8E-52 T 14-10-2018 JV59_29760 042863865967f312604a9f46d31023a5 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 5.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_29760 042863865967f312604a9f46d31023a5 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 5.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_29760 042863865967f312604a9f46d31023a5 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 5.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_29760 042863865967f312604a9f46d31023a5 244 Gene3D G3DSA:3.40.50.720 1 242 2.3E-65 T 14-10-2018 JV59_29760 042863865967f312604a9f46d31023a5 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JV59_22995 e0db8f9d8772c511e5a8b7f497c7ffd8 408 PRINTS PR00407 Eukaryotic molybdopterin domain signature 156 171 8.9E-18 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 JV59_22995 e0db8f9d8772c511e5a8b7f497c7ffd8 408 PRINTS PR00407 Eukaryotic molybdopterin domain signature 55 69 8.9E-18 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 JV59_22995 e0db8f9d8772c511e5a8b7f497c7ffd8 408 PRINTS PR00407 Eukaryotic molybdopterin domain signature 75 91 8.9E-18 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 JV59_22995 e0db8f9d8772c511e5a8b7f497c7ffd8 408 PRINTS PR00407 Eukaryotic molybdopterin domain signature 209 225 8.9E-18 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 JV59_22995 e0db8f9d8772c511e5a8b7f497c7ffd8 408 PRINTS PR00407 Eukaryotic molybdopterin domain signature 226 239 8.9E-18 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 JV59_22995 e0db8f9d8772c511e5a8b7f497c7ffd8 408 PRINTS PR00407 Eukaryotic molybdopterin domain signature 329 341 8.9E-18 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 JV59_22995 e0db8f9d8772c511e5a8b7f497c7ffd8 408 PRINTS PR00407 Eukaryotic molybdopterin domain signature 290 302 8.9E-18 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 JV59_22995 e0db8f9d8772c511e5a8b7f497c7ffd8 408 PRINTS PR00407 Eukaryotic molybdopterin domain signature 141 153 8.9E-18 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 JV59_22995 e0db8f9d8772c511e5a8b7f497c7ffd8 408 SUPERFAMILY SSF81296 292 407 5.25E-32 T 14-10-2018 IPR014756 Immunoglobulin E-set JV59_22995 e0db8f9d8772c511e5a8b7f497c7ffd8 408 Pfam PF00174 Oxidoreductase molybdopterin binding domain 95 262 1.2E-42 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 JV59_22995 e0db8f9d8772c511e5a8b7f497c7ffd8 408 Gene3D G3DSA:2.60.40.650 292 408 5.1E-34 T 14-10-2018 JV59_22995 e0db8f9d8772c511e5a8b7f497c7ffd8 408 SUPERFAMILY SSF56524 56 324 5.49E-56 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 JV59_22995 e0db8f9d8772c511e5a8b7f497c7ffd8 408 Gene3D G3DSA:3.90.420.10 42 289 7.9E-57 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 JV59_22995 e0db8f9d8772c511e5a8b7f497c7ffd8 408 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 289 407 1.5E-16 T 14-10-2018 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 JV59_24215 aa4a9fbf65713558a686349ae18d2ce9 823 Gene3D G3DSA:1.10.390.20 492 615 1.6E-8 T 14-10-2018 JV59_24215 aa4a9fbf65713558a686349ae18d2ce9 823 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 146 164 2.6E-36 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 JV59_24215 aa4a9fbf65713558a686349ae18d2ce9 823 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 501 516 2.6E-36 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 JV59_24215 aa4a9fbf65713558a686349ae18d2ce9 823 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 418 432 2.6E-36 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 JV59_24215 aa4a9fbf65713558a686349ae18d2ce9 823 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 479 497 2.6E-36 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 JV59_24215 aa4a9fbf65713558a686349ae18d2ce9 823 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 436 452 2.6E-36 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 JV59_24215 aa4a9fbf65713558a686349ae18d2ce9 823 SUPERFAMILY SSF49299 615 697 1.7E-20 T 14-10-2018 IPR035986 PKD domain superfamily JV59_24215 aa4a9fbf65713558a686349ae18d2ce9 823 Pfam PF08453 Peptidase family M9 N-terminal 80 259 1.7E-53 T 14-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain JV59_24215 aa4a9fbf65713558a686349ae18d2ce9 823 Gene3D G3DSA:1.10.1740.190 350 491 6.0E-35 T 14-10-2018 JV59_24215 aa4a9fbf65713558a686349ae18d2ce9 823 Gene3D G3DSA:2.60.40.10 616 698 2.2E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_24215 aa4a9fbf65713558a686349ae18d2ce9 823 Pfam PF00801 PKD domain 629 688 2.1E-13 T 14-10-2018 IPR000601 PKD domain JV59_24215 aa4a9fbf65713558a686349ae18d2ce9 823 Pfam PF01752 Collagenase 320 603 2.8E-105 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 JV59_24215 aa4a9fbf65713558a686349ae18d2ce9 823 SMART SM00089 618 700 4.9E-22 T 14-10-2018 IPR022409 PKD/Chitinase domain JV59_18470 7d8ebb4125f1e1a9c6fbf61fe9348b14 249 SMART SM00893 23 211 8.4E-63 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 JV59_18470 7d8ebb4125f1e1a9c6fbf61fe9348b14 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 14-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 JV59_18470 7d8ebb4125f1e1a9c6fbf61fe9348b14 249 PIRSF PIRSF000090 1 249 7.0E-80 T 14-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 JV59_18470 7d8ebb4125f1e1a9c6fbf61fe9348b14 249 Gene3D G3DSA:3.40.50.620 1 248 3.3E-80 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_18470 7d8ebb4125f1e1a9c6fbf61fe9348b14 249 SUPERFAMILY SSF52402 2 242 1.12E-78 T 14-10-2018 JV59_18470 7d8ebb4125f1e1a9c6fbf61fe9348b14 249 Pfam PF01012 Electron transfer flavoprotein domain 26 206 1.0E-45 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 JV59_37500 1d8f3b902335dd8d54503fdb78a6e20e 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 145 2.8E-38 T 14-10-2018 IPR002178 PTS EIIA type-2 domain JV59_37500 1d8f3b902335dd8d54503fdb78a6e20e 148 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain JV59_37500 1d8f3b902335dd8d54503fdb78a6e20e 148 Gene3D G3DSA:3.40.930.10 1 148 1.9E-53 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 JV59_37500 1d8f3b902335dd8d54503fdb78a6e20e 148 SUPERFAMILY SSF55804 1 146 1.7E-41 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 JV59_37500 1d8f3b902335dd8d54503fdb78a6e20e 148 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 146 2.3E-52 T 14-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 JV59_34905 640d66c25f56287bbc7226816ab17da0 159 Pfam PF03918 Cytochrome C biogenesis protein 9 150 3.0E-55 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family JV59_34905 640d66c25f56287bbc7226816ab17da0 159 Gene3D G3DSA:1.10.8.640 20 105 2.9E-36 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily JV59_24090 2bcee4b7e02b777d2147aed87c0f3456 495 Pfam PF00474 Sodium:solute symporter family 35 435 1.5E-105 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 JV59_24090 2bcee4b7e02b777d2147aed87c0f3456 495 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 435 3.4E-96 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 JV59_24090 2bcee4b7e02b777d2147aed87c0f3456 495 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 490 3.7E-216 T 14-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 JV59_24090 2bcee4b7e02b777d2147aed87c0f3456 495 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 417 437 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site JV59_24090 2bcee4b7e02b777d2147aed87c0f3456 495 Gene3D G3DSA:1.20.1730.10 10 494 3.6E-99 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily JV59_19460 fbcac2af6346db7574858e6d0ee445d9 83 Gene3D G3DSA:1.20.1280.290 27 77 2.2E-6 T 14-10-2018 JV59_19460 fbcac2af6346db7574858e6d0ee445d9 83 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 3 73 3.0E-33 T 14-10-2018 IPR020137 Uncharacterised protein family HI1736 JV59_19460 fbcac2af6346db7574858e6d0ee445d9 83 Pfam PF10688 Bacterial inner membrane protein 4 73 2.4E-8 T 14-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV JV59_34195 c4f577440e609c59e86d1097a4f77b55 345 Pfam PF03601 Conserved hypothetical protein 698 21 322 2.3E-69 T 14-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 JV59_18430 77f7690e2398ee9aca120ed9afb3037f 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 6 481 9.8E-237 T 14-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 JV59_18430 77f7690e2398ee9aca120ed9afb3037f 497 SUPERFAMILY SSF53720 2 484 7.85E-141 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JV59_18430 77f7690e2398ee9aca120ed9afb3037f 497 Gene3D G3DSA:3.40.605.10 24 458 4.6E-139 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JV59_18430 77f7690e2398ee9aca120ed9afb3037f 497 Gene3D G3DSA:3.40.309.10 250 450 4.6E-139 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JV59_18430 77f7690e2398ee9aca120ed9afb3037f 497 Pfam PF00171 Aldehyde dehydrogenase family 15 477 3.7E-134 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JV59_18430 77f7690e2398ee9aca120ed9afb3037f 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 JV59_20505 5f0fd46f050be15672044969d186fa8e 412 Gene3D G3DSA:3.40.190.10 21 412 5.6E-55 T 14-10-2018 JV59_20505 5f0fd46f050be15672044969d186fa8e 412 SUPERFAMILY SSF53850 24 407 1.27E-50 T 14-10-2018 JV59_20505 5f0fd46f050be15672044969d186fa8e 412 Pfam PF01547 Bacterial extracellular solute-binding protein 41 322 2.8E-12 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein JV59_18400 eb34c901d8b6a69955214f6d24d5dc77 301 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 236 245 - T 14-10-2018 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|Reactome: R-HSA-77111|Reactome: R-HSA-9033241 JV59_18400 eb34c901d8b6a69955214f6d24d5dc77 301 Gene3D G3DSA:3.20.20.70 5 301 4.5E-134 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_18400 eb34c901d8b6a69955214f6d24d5dc77 301 SUPERFAMILY SSF51569 6 295 9.67E-76 T 14-10-2018 JV59_18400 eb34c901d8b6a69955214f6d24d5dc77 301 Pfam PF00682 HMGL-like 11 279 4.7E-56 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 JV59_40130 99483159bb991464411be8863f41e843 285 SUPERFAMILY SSF88659 195 282 2.06E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JV59_40130 99483159bb991464411be8863f41e843 285 SUPERFAMILY SSF88946 11 122 1.96E-39 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JV59_40130 99483159bb991464411be8863f41e843 285 Pfam PF00140 Sigma-70 factor, region 1.2 14 40 4.2E-7 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JV59_40130 99483159bb991464411be8863f41e843 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_40130 99483159bb991464411be8863f41e843 285 Pfam PF04542 Sigma-70 region 2 53 122 6.4E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JV59_40130 99483159bb991464411be8863f41e843 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 282 5.7E-126 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 JV59_40130 99483159bb991464411be8863f41e843 285 Pfam PF04545 Sigma-70, region 4 229 279 1.1E-14 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 JV59_40130 99483159bb991464411be8863f41e843 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 53.394 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 JV59_40130 99483159bb991464411be8863f41e843 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_40130 99483159bb991464411be8863f41e843 285 Gene3D G3DSA:1.20.120.1810 10 122 3.1E-26 T 14-10-2018 JV59_40130 99483159bb991464411be8863f41e843 285 Gene3D G3DSA:1.20.140.160 131 283 3.5E-14 T 14-10-2018 JV59_40130 99483159bb991464411be8863f41e843 285 PRINTS PR00046 Major sigma-70 factor signature 252 267 3.1E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_40130 99483159bb991464411be8863f41e843 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 3.1E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_40130 99483159bb991464411be8863f41e843 285 PRINTS PR00046 Major sigma-70 factor signature 267 278 3.1E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_40130 99483159bb991464411be8863f41e843 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 3.1E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JV59_40130 99483159bb991464411be8863f41e843 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 280 2.4E-34 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JV59_28490 c170bca852b3bb8ae2f4a1a04382f306 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 5.4E-33 T 14-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 JV59_28490 c170bca852b3bb8ae2f4a1a04382f306 106 SUPERFAMILY SSF54736 21 105 5.18E-32 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like JV59_28490 c170bca852b3bb8ae2f4a1a04382f306 106 Gene3D G3DSA:3.30.1390.10 1 106 1.2E-44 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like JV59_28490 c170bca852b3bb8ae2f4a1a04382f306 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 8 101 27.623 T 14-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS JV59_36935 bdccd08093b02c89bf47b1d2f5fe27bb 242 SUPERFAMILY SSF50249 7 77 1.15E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_36935 bdccd08093b02c89bf47b1d2f5fe27bb 242 Gene3D G3DSA:1.20.1440.120 81 240 4.9E-54 T 14-10-2018 JV59_36935 bdccd08093b02c89bf47b1d2f5fe27bb 242 TIGRFAM TIGR00613 reco: DNA repair protein RecO 8 232 1.1E-38 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 JV59_36935 bdccd08093b02c89bf47b1d2f5fe27bb 242 Pfam PF02565 Recombination protein O C terminal 85 227 3.2E-23 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 JV59_36935 bdccd08093b02c89bf47b1d2f5fe27bb 242 Pfam PF11967 Recombination protein O N terminal 7 78 2.8E-23 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal JV59_36935 bdccd08093b02c89bf47b1d2f5fe27bb 242 SUPERFAMILY SSF57863 88 166 2.12E-11 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger JV59_36935 bdccd08093b02c89bf47b1d2f5fe27bb 242 Hamap MF_00201 DNA repair protein RecO [recO]. 3 232 22.703 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 JV59_36935 bdccd08093b02c89bf47b1d2f5fe27bb 242 Gene3D G3DSA:2.40.50.140 3 80 5.1E-33 T 14-10-2018 JV59_28950 243869c8ee78f44459ee7c16b52b3a42 257 Pfam PF00977 Histidine biosynthesis protein 5 239 2.9E-79 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 JV59_28950 243869c8ee78f44459ee7c16b52b3a42 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.972 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 JV59_28950 243869c8ee78f44459ee7c16b52b3a42 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 8.9E-115 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 JV59_28950 243869c8ee78f44459ee7c16b52b3a42 257 Gene3D G3DSA:3.20.20.70 1 257 3.7E-95 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_28950 243869c8ee78f44459ee7c16b52b3a42 257 SUPERFAMILY SSF51366 1 256 3.06E-74 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 JV59_22760 9143d9d717b6516a79a1c65b98367a4e 275 PIRSF PIRSF000292 1 274 1.4E-123 T 14-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 JV59_22760 9143d9d717b6516a79a1c65b98367a4e 275 SUPERFAMILY SSF49503 102 260 1.34E-48 T 14-10-2018 IPR008972 Cupredoxin JV59_22760 9143d9d717b6516a79a1c65b98367a4e 275 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 1 219 1.0E-112 T 14-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 JV59_22760 9143d9d717b6516a79a1c65b98367a4e 275 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 128 201 7.1E-8 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_22760 9143d9d717b6516a79a1c65b98367a4e 275 Pfam PF06481 COX Aromatic Rich Motif 219 263 2.5E-12 T 14-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 JV59_22760 9143d9d717b6516a79a1c65b98367a4e 275 SUPERFAMILY SSF81464 9 96 1.96E-23 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_22760 9143d9d717b6516a79a1c65b98367a4e 275 Gene3D G3DSA:1.10.287.90 7 92 8.5E-34 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_22760 9143d9d717b6516a79a1c65b98367a4e 275 Gene3D G3DSA:2.60.40.420 93 261 3.8E-54 T 14-10-2018 IPR008972 Cupredoxin JV59_24580 1326fa8c9d21c2edb9b5044e9f36018d 282 SUPERFAMILY SSF53850 88 253 2.53E-17 T 14-10-2018 JV59_24580 1326fa8c9d21c2edb9b5044e9f36018d 282 Gene3D G3DSA:1.10.10.10 1 90 2.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_24580 1326fa8c9d21c2edb9b5044e9f36018d 282 Gene3D G3DSA:3.40.190.10 93 255 2.6E-39 T 14-10-2018 JV59_24580 1326fa8c9d21c2edb9b5044e9f36018d 282 Gene3D G3DSA:3.40.190.10 159 249 2.6E-39 T 14-10-2018 JV59_24580 1326fa8c9d21c2edb9b5044e9f36018d 282 Pfam PF03466 LysR substrate binding domain 88 238 6.5E-17 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_24580 1326fa8c9d21c2edb9b5044e9f36018d 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_24580 1326fa8c9d21c2edb9b5044e9f36018d 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_24580 1326fa8c9d21c2edb9b5044e9f36018d 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_24580 1326fa8c9d21c2edb9b5044e9f36018d 282 SUPERFAMILY SSF46785 1 87 2.78E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_24580 1326fa8c9d21c2edb9b5044e9f36018d 282 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.1E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_37350 0a59ea07e99b2bd17dbbe9b06c63341f 334 SUPERFAMILY SSF53671 4 333 2.49E-97 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JV59_37350 0a59ea07e99b2bd17dbbe9b06c63341f 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 5.2E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JV59_37350 0a59ea07e99b2bd17dbbe9b06c63341f 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 5.2E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JV59_37350 0a59ea07e99b2bd17dbbe9b06c63341f 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 5.2E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JV59_37350 0a59ea07e99b2bd17dbbe9b06c63341f 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 5.2E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JV59_37350 0a59ea07e99b2bd17dbbe9b06c63341f 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 5.2E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JV59_37350 0a59ea07e99b2bd17dbbe9b06c63341f 334 Gene3D G3DSA:3.40.50.1370 5 329 3.2E-144 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JV59_37350 0a59ea07e99b2bd17dbbe9b06c63341f 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 2.8E-55 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 JV59_37350 0a59ea07e99b2bd17dbbe9b06c63341f 334 Gene3D G3DSA:3.40.50.1370 152 319 3.2E-144 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JV59_37350 0a59ea07e99b2bd17dbbe9b06c63341f 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 82.308 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 JV59_37350 0a59ea07e99b2bd17dbbe9b06c63341f 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 2.1E-130 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JV59_37350 0a59ea07e99b2bd17dbbe9b06c63341f 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 2.2E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JV59_37350 0a59ea07e99b2bd17dbbe9b06c63341f 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 2.2E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JV59_37350 0a59ea07e99b2bd17dbbe9b06c63341f 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.2E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JV59_37350 0a59ea07e99b2bd17dbbe9b06c63341f 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 2.2E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JV59_37350 0a59ea07e99b2bd17dbbe9b06c63341f 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 9.4E-45 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 JV59_37350 0a59ea07e99b2bd17dbbe9b06c63341f 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JV59_31795 a3393f0b7f3f9820d7aa01a2b1158542 467 SUPERFAMILY SSF58104 157 466 7.46E-66 T 14-10-2018 JV59_31795 a3393f0b7f3f9820d7aa01a2b1158542 467 Gene3D G3DSA:1.10.287.950 139 466 1.3E-62 T 14-10-2018 JV59_31795 a3393f0b7f3f9820d7aa01a2b1158542 467 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 251 431 3.1E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_31795 a3393f0b7f3f9820d7aa01a2b1158542 467 SMART SM00283 205 466 1.2E-60 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_02820 ae5ef38e963339267e2ddb34754d6aa7 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 5.3E-30 T 14-10-2018 JV59_02820 ae5ef38e963339267e2ddb34754d6aa7 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 5.3E-30 T 14-10-2018 JV59_02820 ae5ef38e963339267e2ddb34754d6aa7 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 5.3E-30 T 14-10-2018 JV59_02820 ae5ef38e963339267e2ddb34754d6aa7 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 5.3E-30 T 14-10-2018 JV59_02820 ae5ef38e963339267e2ddb34754d6aa7 574 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 5.4E-32 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 JV59_02820 ae5ef38e963339267e2ddb34754d6aa7 574 Gene3D G3DSA:3.20.20.60 234 574 6.2E-125 T 14-10-2018 JV59_02820 ae5ef38e963339267e2ddb34754d6aa7 574 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 2.1E-245 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 JV59_02820 ae5ef38e963339267e2ddb34754d6aa7 574 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 JV59_02820 ae5ef38e963339267e2ddb34754d6aa7 574 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 2.1E-20 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JV59_02820 ae5ef38e963339267e2ddb34754d6aa7 574 Gene3D G3DSA:1.10.274.10 21 146 1.1E-79 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 JV59_02820 ae5ef38e963339267e2ddb34754d6aa7 574 SUPERFAMILY SSF51621 249 549 9.42E-110 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JV59_02820 ae5ef38e963339267e2ddb34754d6aa7 574 Gene3D G3DSA:3.50.30.10 4 233 1.1E-79 T 14-10-2018 JV59_02820 ae5ef38e963339267e2ddb34754d6aa7 574 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 1.5E-123 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 JV59_02820 ae5ef38e963339267e2ddb34754d6aa7 574 SUPERFAMILY SSF52009 125 243 1.44E-34 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 JV59_02820 ae5ef38e963339267e2ddb34754d6aa7 574 SUPERFAMILY SSF47831 24 143 2.88E-32 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 JV59_02820 ae5ef38e963339267e2ddb34754d6aa7 574 PIRSF PIRSF000732 1 574 6.3E-218 T 14-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 JV59_33240 03ae45c167200afc64211a02b15464f1 332 Pfam PF00591 Glycosyl transferase family, a/b domain 72 321 1.2E-105 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JV59_33240 03ae45c167200afc64211a02b15464f1 332 SUPERFAMILY SSF47648 2 67 2.75E-19 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 JV59_33240 03ae45c167200afc64211a02b15464f1 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 63 5.4E-17 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 JV59_33240 03ae45c167200afc64211a02b15464f1 332 SUPERFAMILY SSF52418 70 328 1.07E-94 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 JV59_33240 03ae45c167200afc64211a02b15464f1 332 Gene3D G3DSA:1.20.970.10 10 183 8.0E-125 T 14-10-2018 JV59_33240 03ae45c167200afc64211a02b15464f1 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 40.069 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 JV59_33240 03ae45c167200afc64211a02b15464f1 332 Gene3D G3DSA:3.40.1030.10 67 321 8.0E-125 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 JV59_33240 03ae45c167200afc64211a02b15464f1 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 329 3.3E-129 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 JV59_37250 ae110d25b46c764b689ea6aa71285873 65 Gene3D G3DSA:3.30.70.1680 1 59 8.5E-30 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 JV59_37250 ae110d25b46c764b689ea6aa71285873 65 SUPERFAMILY SSF117130 1 54 6.93E-21 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 JV59_37250 ae110d25b46c764b689ea6aa71285873 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 JV59_37250 ae110d25b46c764b689ea6aa71285873 65 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 63 16.989 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 JV59_37250 ae110d25b46c764b689ea6aa71285873 65 Pfam PF02599 Global regulator protein family 1 52 2.0E-26 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 JV59_37250 ae110d25b46c764b689ea6aa71285873 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 6.2E-30 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 JV59_39170 8cba368c50e2e17be25042284f02ebab 515 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 29 317 3.0E-84 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme JV59_39170 8cba368c50e2e17be25042284f02ebab 515 SUPERFAMILY SSF53686 15 366 9.69E-108 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JV59_39170 8cba368c50e2e17be25042284f02ebab 515 Gene3D G3DSA:3.40.1020.10 339 515 3.9E-72 T 14-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 JV59_39170 8cba368c50e2e17be25042284f02ebab 515 SUPERFAMILY SSF55021 338 424 7.17E-28 T 14-10-2018 JV59_39170 8cba368c50e2e17be25042284f02ebab 515 Gene3D G3DSA:3.40.50.1100 26 328 4.6E-135 T 14-10-2018 JV59_39170 8cba368c50e2e17be25042284f02ebab 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 428 514 1.6E-26 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 JV59_39170 8cba368c50e2e17be25042284f02ebab 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 330 420 2.3E-25 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 JV59_39170 8cba368c50e2e17be25042284f02ebab 515 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 16 514 9.7E-252 T 14-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 JV59_39170 8cba368c50e2e17be25042284f02ebab 515 Gene3D G3DSA:3.40.50.1100 62 158 4.6E-135 T 14-10-2018 JV59_39170 8cba368c50e2e17be25042284f02ebab 515 SUPERFAMILY SSF55021 421 514 8.47E-27 T 14-10-2018 JV59_39170 8cba368c50e2e17be25042284f02ebab 515 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 JV59_34555 26df239498c97d28a4c9b24ba717f2b7 285 Gene3D G3DSA:3.40.50.1820 9 278 3.9E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_34555 26df239498c97d28a4c9b24ba717f2b7 285 SUPERFAMILY SSF53474 12 283 1.46E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_34555 26df239498c97d28a4c9b24ba717f2b7 285 PRINTS PR00412 Epoxide hydrolase signature 116 129 7.4E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JV59_34555 26df239498c97d28a4c9b24ba717f2b7 285 PRINTS PR00412 Epoxide hydrolase signature 102 115 7.4E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JV59_34555 26df239498c97d28a4c9b24ba717f2b7 285 PRINTS PR00412 Epoxide hydrolase signature 56 71 7.4E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JV59_34555 26df239498c97d28a4c9b24ba717f2b7 285 PRINTS PR00412 Epoxide hydrolase signature 259 281 7.4E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JV59_34555 26df239498c97d28a4c9b24ba717f2b7 285 PRINTS PR00412 Epoxide hydrolase signature 34 52 7.4E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JV59_34555 26df239498c97d28a4c9b24ba717f2b7 285 Pfam PF00561 alpha/beta hydrolase fold 29 138 8.1E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_33210 e90b595cc90aed5a3e33650d0a139bd7 788 SMART SM00304 290 342 5.1E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_33210 e90b595cc90aed5a3e33650d0a139bd7 788 SUPERFAMILY SSF55073 353 494 5.57E-12 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_33210 e90b595cc90aed5a3e33650d0a139bd7 788 SMART SM00267 337 504 3.1E-6 T 14-10-2018 IPR000160 GGDEF domain JV59_33210 e90b595cc90aed5a3e33650d0a139bd7 788 Pfam PF14827 Double sensory domain of two-component sensor kinase 45 227 1.0E-12 T 14-10-2018 IPR029150 Double Cache domain 3 JV59_33210 e90b595cc90aed5a3e33650d0a139bd7 788 Pfam PF00672 HAMP domain 290 333 4.4E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_33210 e90b595cc90aed5a3e33650d0a139bd7 788 Gene3D G3DSA:3.20.20.450 516 770 3.3E-89 T 14-10-2018 IPR035919 EAL domain superfamily JV59_33210 e90b595cc90aed5a3e33650d0a139bd7 788 SUPERFAMILY SSF158472 291 337 2.48E-8 T 14-10-2018 JV59_33210 e90b595cc90aed5a3e33650d0a139bd7 788 Gene3D G3DSA:1.20.1480.50 256 344 2.8E-11 T 14-10-2018 JV59_33210 e90b595cc90aed5a3e33650d0a139bd7 788 SMART SM00052 513 758 3.8E-95 T 14-10-2018 IPR001633 EAL domain JV59_33210 e90b595cc90aed5a3e33650d0a139bd7 788 SUPERFAMILY SSF141868 519 764 3.79E-82 T 14-10-2018 IPR035919 EAL domain superfamily JV59_33210 e90b595cc90aed5a3e33650d0a139bd7 788 Gene3D G3DSA:3.30.70.270 345 515 7.5E-18 T 14-10-2018 JV59_33210 e90b595cc90aed5a3e33650d0a139bd7 788 Pfam PF00990 Diguanylate cyclase, GGDEF domain 349 494 9.2E-13 T 14-10-2018 IPR000160 GGDEF domain JV59_33210 e90b595cc90aed5a3e33650d0a139bd7 788 Pfam PF00563 EAL domain 520 753 1.4E-68 T 14-10-2018 IPR001633 EAL domain JV59_25270 64abf3e8bc5c84fa4126481c2a44f027 1671 Pfam PF00550 Phosphopantetheine attachment site 1568 1631 4.8E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain JV59_25270 64abf3e8bc5c84fa4126481c2a44f027 1671 SUPERFAMILY SSF47336 1564 1633 2.62E-14 T 14-10-2018 IPR036736 ACP-like superfamily JV59_25270 64abf3e8bc5c84fa4126481c2a44f027 1671 Gene3D G3DSA:3.30.300.30 400 498 1.1E-23 T 14-10-2018 JV59_25270 64abf3e8bc5c84fa4126481c2a44f027 1671 Gene3D G3DSA:3.40.50.12780 10 399 8.2E-97 T 14-10-2018 JV59_25270 64abf3e8bc5c84fa4126481c2a44f027 1671 Gene3D G3DSA:3.40.50.12780 1039 1454 3.4E-114 T 14-10-2018 JV59_25270 64abf3e8bc5c84fa4126481c2a44f027 1671 SUPERFAMILY SSF56801 1011 1578 3.01E-138 T 14-10-2018 JV59_25270 64abf3e8bc5c84fa4126481c2a44f027 1671 Pfam PF13193 AMP-binding enzyme C-terminal domain 1468 1542 1.8E-10 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JV59_25270 64abf3e8bc5c84fa4126481c2a44f027 1671 Pfam PF13193 AMP-binding enzyme C-terminal domain 413 486 1.6E-5 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JV59_25270 64abf3e8bc5c84fa4126481c2a44f027 1671 SUPERFAMILY SSF56801 15 525 7.2E-120 T 14-10-2018 JV59_25270 64abf3e8bc5c84fa4126481c2a44f027 1671 Gene3D G3DSA:3.30.559.10 604 962 8.8E-89 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JV59_25270 64abf3e8bc5c84fa4126481c2a44f027 1671 Pfam PF00668 Condensation domain 602 1032 2.1E-69 T 14-10-2018 IPR001242 Condensation domain JV59_25270 64abf3e8bc5c84fa4126481c2a44f027 1671 Gene3D G3DSA:3.30.300.30 1455 1563 1.1E-27 T 14-10-2018 JV59_25270 64abf3e8bc5c84fa4126481c2a44f027 1671 SUPERFAMILY SSF52777 778 1022 2.67E-39 T 14-10-2018 JV59_25270 64abf3e8bc5c84fa4126481c2a44f027 1671 Gene3D G3DSA:3.30.559.30 776 1015 8.8E-89 T 14-10-2018 JV59_25270 64abf3e8bc5c84fa4126481c2a44f027 1671 ProSitePatterns PS00455 Putative AMP-binding domain signature. 160 171 - T 14-10-2018 IPR020845 AMP-binding, conserved site JV59_25270 64abf3e8bc5c84fa4126481c2a44f027 1671 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1201 1212 - T 14-10-2018 IPR020845 AMP-binding, conserved site JV59_25270 64abf3e8bc5c84fa4126481c2a44f027 1671 Gene3D G3DSA:1.10.1200.10 1565 1633 6.8E-16 T 14-10-2018 IPR036736 ACP-like superfamily JV59_25270 64abf3e8bc5c84fa4126481c2a44f027 1671 Pfam PF00501 AMP-binding enzyme 1054 1460 1.6E-83 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JV59_25270 64abf3e8bc5c84fa4126481c2a44f027 1671 Pfam PF00501 AMP-binding enzyme 24 405 6.4E-73 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JV59_25270 64abf3e8bc5c84fa4126481c2a44f027 1671 SUPERFAMILY SSF47336 506 576 3.53E-10 T 14-10-2018 IPR036736 ACP-like superfamily JV59_25270 64abf3e8bc5c84fa4126481c2a44f027 1671 SUPERFAMILY SSF52777 604 773 4.56E-31 T 14-10-2018 JV59_25270 64abf3e8bc5c84fa4126481c2a44f027 1671 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 43 429 5.4E-105 T 14-10-2018 IPR010071 Amino acid adenylation domain JV59_25270 64abf3e8bc5c84fa4126481c2a44f027 1671 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1074 1484 1.2E-124 T 14-10-2018 IPR010071 Amino acid adenylation domain JV59_25270 64abf3e8bc5c84fa4126481c2a44f027 1671 Gene3D G3DSA:1.10.1200.10 500 585 6.0E-14 T 14-10-2018 IPR036736 ACP-like superfamily JV59_25270 64abf3e8bc5c84fa4126481c2a44f027 1671 SMART SM00823 Phosphopantetheine attachment site 1567 1636 0.0042 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JV59_16255 377553c8ef5926639b737f6e36ce0dbf 211 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 3.7E-11 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_16255 377553c8ef5926639b737f6e36ce0dbf 211 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 118 146 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 JV59_16255 377553c8ef5926639b737f6e36ce0dbf 211 SUPERFAMILY SSF51161 19 205 4.02E-43 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JV59_16255 377553c8ef5926639b737f6e36ce0dbf 211 Gene3D G3DSA:2.160.10.10 1 210 8.8E-75 T 14-10-2018 JV59_38555 29f6383dc0f8b052ef32ce7daf427031 389 Gene3D G3DSA:3.90.1150.10 260 385 1.6E-35 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_38555 29f6383dc0f8b052ef32ce7daf427031 389 Gene3D G3DSA:3.40.640.10 1 259 3.9E-89 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_38555 29f6383dc0f8b052ef32ce7daf427031 389 PIRSF PIRSF000390 1 387 1.7E-107 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase JV59_38555 29f6383dc0f8b052ef32ce7daf427031 389 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 2 384 7.5E-171 T 14-10-2018 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase JV59_38555 29f6383dc0f8b052ef32ce7daf427031 389 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 9 380 1.6E-110 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase JV59_38555 29f6383dc0f8b052ef32ce7daf427031 389 SUPERFAMILY SSF53383 2 384 5.06E-113 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_23985 e369b69bd8603f9123653cd64512a74c 152 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 145 4.1E-51 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 JV59_23985 e369b69bd8603f9123653cd64512a74c 152 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 32.093 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 JV59_17405 86f37782d6719229586098227d3c3dde 167 Pfam PF06228 Haem utilisation ChuX/HutX 24 160 6.3E-32 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like JV59_17405 86f37782d6719229586098227d3c3dde 167 SUPERFAMILY SSF144064 1 164 1.83E-56 T 14-10-2018 JV59_17405 86f37782d6719229586098227d3c3dde 167 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 8 160 3.4E-62 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like JV59_17405 86f37782d6719229586098227d3c3dde 167 Gene3D G3DSA:3.40.1570.10 1 167 1.3E-60 T 14-10-2018 JV59_17405 86f37782d6719229586098227d3c3dde 167 PIRSF PIRSF030840 2 167 4.3E-63 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like JV59_40120 c1e3ca55d5f6a259aee77e99f663a778 224 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_40120 c1e3ca55d5f6a259aee77e99f663a778 224 Pfam PF00005 ABC transporter 18 165 1.7E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_40120 c1e3ca55d5f6a259aee77e99f663a778 224 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 8.1E-89 T 14-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 JV59_40120 c1e3ca55d5f6a259aee77e99f663a778 224 SMART SM00382 27 215 1.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_40120 c1e3ca55d5f6a259aee77e99f663a778 224 SUPERFAMILY SSF52540 1 219 1.54E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_40120 c1e3ca55d5f6a259aee77e99f663a778 224 Gene3D G3DSA:3.40.50.300 1 222 2.0E-60 T 14-10-2018 JV59_31295 11402670f0cf40262f29d772c5fc8020 101 Pfam PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI 18 101 1.6E-8 T 14-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 JV59_31295 11402670f0cf40262f29d772c5fc8020 101 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 67 101 4.2E-11 T 14-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 JV59_35580 a8a1a7a4afedae6d7ecaaf9e0b81e1ad 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_35580 a8a1a7a4afedae6d7ecaaf9e0b81e1ad 556 Gene3D G3DSA:3.40.50.620 30 247 1.2E-103 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_35580 a8a1a7a4afedae6d7ecaaf9e0b81e1ad 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.217 T 14-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 JV59_35580 a8a1a7a4afedae6d7ecaaf9e0b81e1ad 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 7.7E-125 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 JV59_35580 a8a1a7a4afedae6d7ecaaf9e0b81e1ad 556 SUPERFAMILY SSF50715 340 548 6.28E-80 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JV59_35580 a8a1a7a4afedae6d7ecaaf9e0b81e1ad 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 2.6E-63 T 14-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JV59_35580 a8a1a7a4afedae6d7ecaaf9e0b81e1ad 556 Gene3D G3DSA:2.40.240.10 340 547 9.4E-82 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JV59_35580 a8a1a7a4afedae6d7ecaaf9e0b81e1ad 556 Gene3D G3DSA:2.40.240.10 348 466 9.4E-82 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JV59_35580 a8a1a7a4afedae6d7ecaaf9e0b81e1ad 556 Gene3D G3DSA:1.10.1160.10 261 339 1.8E-36 T 14-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 JV59_35580 a8a1a7a4afedae6d7ecaaf9e0b81e1ad 556 SUPERFAMILY SSF52374 11 337 2.57E-102 T 14-10-2018 JV59_35580 a8a1a7a4afedae6d7ecaaf9e0b81e1ad 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 6.0E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JV59_35580 a8a1a7a4afedae6d7ecaaf9e0b81e1ad 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 6.0E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JV59_35580 a8a1a7a4afedae6d7ecaaf9e0b81e1ad 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 6.0E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JV59_35580 a8a1a7a4afedae6d7ecaaf9e0b81e1ad 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 6.0E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JV59_35580 a8a1a7a4afedae6d7ecaaf9e0b81e1ad 556 Gene3D G3DSA:3.90.800.10 101 209 1.2E-103 T 14-10-2018 JV59_35580 a8a1a7a4afedae6d7ecaaf9e0b81e1ad 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 1.9E-295 T 14-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JV59_29565 e62141a0a294afe1cb1d587c52820c70 218 SMART SM00882 4 215 3.6E-67 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 JV59_29565 e62141a0a294afe1cb1d587c52820c70 218 Pfam PF01144 Coenzyme A transferase 8 214 7.7E-64 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 JV59_29565 e62141a0a294afe1cb1d587c52820c70 218 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 6 213 3.8E-63 T 14-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 JV59_29565 e62141a0a294afe1cb1d587c52820c70 218 SUPERFAMILY SSF100950 2 216 5.33E-75 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JV59_29565 e62141a0a294afe1cb1d587c52820c70 218 Gene3D G3DSA:3.40.1080.10 1 217 1.9E-75 T 14-10-2018 JV59_29565 e62141a0a294afe1cb1d587c52820c70 218 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 16 31 - T 14-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 JV59_35555 6a874d55b68ad72340b981aa57a3bde3 177 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 JV59_35555 6a874d55b68ad72340b981aa57a3bde3 177 TIGRFAM TIGR01752 flav_long: flavodoxin 4 170 3.8E-70 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 JV59_35555 6a874d55b68ad72340b981aa57a3bde3 177 Gene3D G3DSA:3.40.50.360 3 176 2.1E-54 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_35555 6a874d55b68ad72340b981aa57a3bde3 177 PIRSF PIRSF038996 1 174 9.1E-66 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 JV59_35555 6a874d55b68ad72340b981aa57a3bde3 177 SUPERFAMILY SSF52218 4 172 2.25E-49 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_35555 6a874d55b68ad72340b981aa57a3bde3 177 Pfam PF00258 Flavodoxin 6 162 4.8E-32 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 JV59_02085 de106b3c8289cc75958f0620a9ff63b4 909 PRINTS PR00906 SecA protein signature 117 127 1.7E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JV59_02085 de106b3c8289cc75958f0620a9ff63b4 909 PRINTS PR00906 SecA protein signature 170 190 1.7E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JV59_02085 de106b3c8289cc75958f0620a9ff63b4 909 PRINTS PR00906 SecA protein signature 377 394 1.7E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JV59_02085 de106b3c8289cc75958f0620a9ff63b4 909 PRINTS PR00906 SecA protein signature 340 362 1.7E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JV59_02085 de106b3c8289cc75958f0620a9ff63b4 909 PRINTS PR00906 SecA protein signature 414 427 1.7E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JV59_02085 de106b3c8289cc75958f0620a9ff63b4 909 PRINTS PR00906 SecA protein signature 63 87 1.7E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JV59_02085 de106b3c8289cc75958f0620a9ff63b4 909 PRINTS PR00906 SecA protein signature 101 115 1.7E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JV59_02085 de106b3c8289cc75958f0620a9ff63b4 909 SUPERFAMILY SSF81886 620 896 5.62E-83 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily JV59_02085 de106b3c8289cc75958f0620a9ff63b4 909 ProSitePatterns PS01312 SecA family signature. 501 516 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 JV59_02085 de106b3c8289cc75958f0620a9ff63b4 909 SMART SM00957 6 403 0.0 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 JV59_02085 de106b3c8289cc75958f0620a9ff63b4 909 Gene3D G3DSA:3.90.1440.10 229 369 1.5E-176 T 14-10-2018 JV59_02085 de106b3c8289cc75958f0620a9ff63b4 909 Pfam PF07516 SecA Wing and Scaffold domain 617 829 4.5E-66 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 JV59_02085 de106b3c8289cc75958f0620a9ff63b4 909 SMART SM00958 228 359 5.6E-81 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 JV59_02085 de106b3c8289cc75958f0620a9ff63b4 909 Pfam PF07517 SecA DEAD-like domain 7 403 1.6E-133 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 JV59_02085 de106b3c8289cc75958f0620a9ff63b4 909 Pfam PF01043 SecA preprotein cross-linking domain 232 359 8.3E-39 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 JV59_02085 de106b3c8289cc75958f0620a9ff63b4 909 Gene3D G3DSA:3.40.50.300 22 416 1.5E-176 T 14-10-2018 JV59_02085 de106b3c8289cc75958f0620a9ff63b4 909 SUPERFAMILY SSF52540 418 610 2.22E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_02085 de106b3c8289cc75958f0620a9ff63b4 909 Gene3D G3DSA:1.10.3060.10 621 833 4.0E-76 T 14-10-2018 JV59_02085 de106b3c8289cc75958f0620a9ff63b4 909 SUPERFAMILY SSF52540 5 416 5.73E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_02085 de106b3c8289cc75958f0620a9ff63b4 909 Gene3D G3DSA:3.40.50.300 418 620 1.3E-87 T 14-10-2018 JV59_02085 de106b3c8289cc75958f0620a9ff63b4 909 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 816 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JV59_02085 de106b3c8289cc75958f0620a9ff63b4 909 SUPERFAMILY SSF81767 227 369 8.11E-43 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 JV59_02085 de106b3c8289cc75958f0620a9ff63b4 909 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.003 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JV59_02085 de106b3c8289cc75958f0620a9ff63b4 909 Pfam PF02810 SEC-C motif 888 906 2.0E-10 T 14-10-2018 IPR004027 SEC-C motif JV59_30980 af729a0e58b4a3742ea657576b79c24e 629 SMART SM00304 298 352 1.5E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_30980 af729a0e58b4a3742ea657576b79c24e 629 Pfam PF00672 HAMP domain 299 348 3.0E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_30980 af729a0e58b4a3742ea657576b79c24e 629 SUPERFAMILY SSF58104 320 629 4.05E-69 T 14-10-2018 JV59_30980 af729a0e58b4a3742ea657576b79c24e 629 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 430 595 3.0E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_30980 af729a0e58b4a3742ea657576b79c24e 629 SMART SM00283 367 628 7.9E-58 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_30980 af729a0e58b4a3742ea657576b79c24e 629 Gene3D G3DSA:1.10.287.950 298 629 4.1E-64 T 14-10-2018 JV59_38955 256c5103b63aeca08b375f2734f4ed6a 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 9.2E-57 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_38955 256c5103b63aeca08b375f2734f4ed6a 609 SUPERFAMILY SSF54980 402 516 1.29E-26 T 14-10-2018 IPR035647 EF-G domain III/V-like JV59_38955 256c5103b63aeca08b375f2734f4ed6a 609 SUPERFAMILY SSF52540 5 211 9.89E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_38955 256c5103b63aeca08b375f2734f4ed6a 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_38955 256c5103b63aeca08b375f2734f4ed6a 609 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_38955 256c5103b63aeca08b375f2734f4ed6a 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_38955 256c5103b63aeca08b375f2734f4ed6a 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_38955 256c5103b63aeca08b375f2734f4ed6a 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_38955 256c5103b63aeca08b375f2734f4ed6a 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site JV59_38955 256c5103b63aeca08b375f2734f4ed6a 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 1.2E-9 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 JV59_38955 256c5103b63aeca08b375f2734f4ed6a 609 Gene3D G3DSA:3.30.70.240 393 486 6.0E-129 T 14-10-2018 JV59_38955 256c5103b63aeca08b375f2734f4ed6a 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 154 3.1E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JV59_38955 256c5103b63aeca08b375f2734f4ed6a 609 Gene3D G3DSA:3.40.50.300 5 202 8.5E-69 T 14-10-2018 JV59_38955 256c5103b63aeca08b375f2734f4ed6a 609 SUPERFAMILY SSF54980 306 391 3.17E-15 T 14-10-2018 IPR035647 EF-G domain III/V-like JV59_38955 256c5103b63aeca08b375f2734f4ed6a 609 Gene3D G3DSA:2.40.30.10 203 303 2.3E-34 T 14-10-2018 JV59_38955 256c5103b63aeca08b375f2734f4ed6a 609 Gene3D G3DSA:2.40.50.250 487 603 6.0E-129 T 14-10-2018 JV59_38955 256c5103b63aeca08b375f2734f4ed6a 609 Gene3D G3DSA:3.30.70.870 310 594 6.0E-129 T 14-10-2018 JV59_38955 256c5103b63aeca08b375f2734f4ed6a 609 SUPERFAMILY SSF50447 155 303 2.7E-33 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JV59_38955 256c5103b63aeca08b375f2734f4ed6a 609 Pfam PF00679 Elongation factor G C-terminus 399 481 3.2E-22 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like JV59_38955 256c5103b63aeca08b375f2734f4ed6a 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 3.2E-294 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 JV59_18825 aa860b461f7ba882dcf5b7f5fe699adb 375 PIRSF PIRSF000345 6 331 6.5E-100 T 14-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 JV59_18825 aa860b461f7ba882dcf5b7f5fe699adb 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 99 128 3.5E-33 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 JV59_18825 aa860b461f7ba882dcf5b7f5fe699adb 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 158 176 3.5E-33 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 JV59_18825 aa860b461f7ba882dcf5b7f5fe699adb 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 61 81 3.5E-33 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 JV59_18825 aa860b461f7ba882dcf5b7f5fe699adb 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 38 60 3.5E-33 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 JV59_18825 aa860b461f7ba882dcf5b7f5fe699adb 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 232 246 3.5E-33 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 JV59_18825 aa860b461f7ba882dcf5b7f5fe699adb 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 189 210 3.5E-33 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 JV59_18825 aa860b461f7ba882dcf5b7f5fe699adb 375 Pfam PF00487 Fatty acid desaturase 42 263 4.5E-23 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 JV59_22180 015e959e22d5c1168d3c3cb33abeb721 323 SUPERFAMILY SSF46689 211 259 3.84E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_22180 015e959e22d5c1168d3c3cb33abeb721 323 SMART SM00342 225 308 3.4E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_22180 015e959e22d5c1168d3c3cb33abeb721 323 Gene3D G3DSA:1.10.10.60 205 314 5.5E-28 T 14-10-2018 JV59_22180 015e959e22d5c1168d3c3cb33abeb721 323 Pfam PF12833 Helix-turn-helix domain 231 307 1.0E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_22180 015e959e22d5c1168d3c3cb33abeb721 323 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 292 308 1.2E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_22180 015e959e22d5c1168d3c3cb33abeb721 323 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 277 292 1.2E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_22180 015e959e22d5c1168d3c3cb33abeb721 323 SUPERFAMILY SSF46689 262 310 2.23E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_34035 d0eb323f54f5d5416d2615456a2aa223 506 Pfam PF04389 Peptidase family M28 184 380 1.2E-37 T 14-10-2018 IPR007484 Peptidase M28 JV59_34035 d0eb323f54f5d5416d2615456a2aa223 506 Gene3D G3DSA:2.60.120.380 405 504 1.1E-36 T 14-10-2018 JV59_34035 d0eb323f54f5d5416d2615456a2aa223 506 Gene3D G3DSA:3.40.630.10 107 402 6.0E-93 T 14-10-2018 JV59_34035 d0eb323f54f5d5416d2615456a2aa223 506 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 427 489 2.2E-11 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial JV59_34035 d0eb323f54f5d5416d2615456a2aa223 506 SUPERFAMILY SSF89260 403 496 7.59E-8 T 14-10-2018 JV59_34035 d0eb323f54f5d5416d2615456a2aa223 506 PIRSF PIRSF036685 4 506 8.7E-266 T 14-10-2018 IPR012189 Peptidase M28E, aminopeptidase AP1 JV59_34035 d0eb323f54f5d5416d2615456a2aa223 506 SUPERFAMILY SSF53187 111 395 1.5E-68 T 14-10-2018 JV59_30370 d4209f1037f50ab24268da675065a55a 462 Pfam PF16750 Sensor domain of 2-component histidine kinase 50 150 5.0E-27 T 14-10-2018 IPR031930 2-component histidine kinase, sensor domain JV59_30370 d4209f1037f50ab24268da675065a55a 462 Pfam PF00672 HAMP domain 180 230 3.5E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_30370 d4209f1037f50ab24268da675065a55a 462 Gene3D G3DSA:1.10.287.130 183 300 8.8E-28 T 14-10-2018 JV59_30370 d4209f1037f50ab24268da675065a55a 462 SMART SM00388 235 299 9.4E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_30370 d4209f1037f50ab24268da675065a55a 462 Gene3D G3DSA:3.30.450.170 41 151 1.1E-6 T 14-10-2018 IPR038428 2-component histidine kinase, sensor domain superfamily JV59_30370 d4209f1037f50ab24268da675065a55a 462 SMART SM00304 179 234 1.5E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_30370 d4209f1037f50ab24268da675065a55a 462 SMART SM00387 344 460 5.7E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_30370 d4209f1037f50ab24268da675065a55a 462 SUPERFAMILY SSF55874 289 458 1.07E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_30370 d4209f1037f50ab24268da675065a55a 462 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 298 1.2E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_30370 d4209f1037f50ab24268da675065a55a 462 SUPERFAMILY SSF47384 218 299 2.55E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_30370 d4209f1037f50ab24268da675065a55a 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 8.4E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_30370 d4209f1037f50ab24268da675065a55a 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 8.4E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_30370 d4209f1037f50ab24268da675065a55a 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 8.4E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_30370 d4209f1037f50ab24268da675065a55a 462 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 458 5.9E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_30370 d4209f1037f50ab24268da675065a55a 462 SUPERFAMILY SSF158472 179 231 3.66E-5 T 14-10-2018 JV59_30370 d4209f1037f50ab24268da675065a55a 462 Gene3D G3DSA:3.30.565.10 302 461 5.2E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_32560 283be11923bd1914146dd47d55cf1960 336 SUPERFAMILY SSF56529 77 335 2.14E-56 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 JV59_32560 283be11923bd1914146dd47d55cf1960 336 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 333 1.2E-40 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 JV59_32560 283be11923bd1914146dd47d55cf1960 336 Gene3D G3DSA:3.90.850.10 1 336 1.8E-142 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 JV59_28155 8b321beefc1c30de84eb695b190efdf5 371 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JV59_28155 8b321beefc1c30de84eb695b190efdf5 371 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 353 2.7E-57 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 JV59_28155 8b321beefc1c30de84eb695b190efdf5 371 SUPERFAMILY SSF55347 133 354 1.13E-77 T 14-10-2018 JV59_28155 8b321beefc1c30de84eb695b190efdf5 371 Gene3D G3DSA:3.40.50.720 3 356 3.8E-146 T 14-10-2018 JV59_28155 8b321beefc1c30de84eb695b190efdf5 371 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 366 1.5E-188 T 14-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JV59_28155 8b321beefc1c30de84eb695b190efdf5 371 PIRSF PIRSF000148 1 371 1.5E-64 T 14-10-2018 JV59_28155 8b321beefc1c30de84eb695b190efdf5 371 SMART SM00859 2 121 6.8E-23 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 JV59_28155 8b321beefc1c30de84eb695b190efdf5 371 Gene3D G3DSA:3.30.360.10 134 350 3.8E-146 T 14-10-2018 JV59_28155 8b321beefc1c30de84eb695b190efdf5 371 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 31.538 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JV59_28155 8b321beefc1c30de84eb695b190efdf5 371 SUPERFAMILY SSF51735 1 146 1.03E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_28155 8b321beefc1c30de84eb695b190efdf5 371 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 120 1.2E-22 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 JV59_28730 3c456a77e26a237b94816f252c0b7b4a 297 PIRSF PIRSF006278 4 295 3.5E-17 T 14-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase JV59_28730 3c456a77e26a237b94816f252c0b7b4a 297 SUPERFAMILY SSF53686 6 293 1.99E-51 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JV59_28730 3c456a77e26a237b94816f252c0b7b4a 297 Gene3D G3DSA:3.40.50.1100 33 135 5.6E-20 T 14-10-2018 JV59_28730 3c456a77e26a237b94816f252c0b7b4a 297 Gene3D G3DSA:3.40.50.1100 14 282 5.6E-20 T 14-10-2018 JV59_19070 e51bb073d1b27ded36383d5e6b2e51ad 290 Pfam PF11060 Protein of unknown function (DUF2861) 23 285 2.5E-86 T 14-10-2018 IPR021290 Protein of unknown function DUF2861 JV59_39540 3dfd23bb8a321f13daac5ff46ab28df6 175 Pfam PF00210 Ferritin-like domain 8 143 2.2E-40 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 JV59_39540 3dfd23bb8a321f13daac5ff46ab28df6 175 SUPERFAMILY SSF47240 1 159 7.32E-59 T 14-10-2018 IPR009078 Ferritin-like superfamily JV59_39540 3dfd23bb8a321f13daac5ff46ab28df6 175 Gene3D G3DSA:1.20.1260.10 1 175 2.1E-53 T 14-10-2018 IPR012347 Ferritin-like JV59_02695 e228c303e30dca050156b386b6da135a 1036 Gene3D G3DSA:3.30.70.1430 40 799 0.0 T 14-10-2018 JV59_02695 e228c303e30dca050156b386b6da135a 1036 Gene3D G3DSA:3.30.70.1430 556 654 0.0 T 14-10-2018 JV59_02695 e228c303e30dca050156b386b6da135a 1036 Gene3D G3DSA:3.30.70.1440 655 848 0.0 T 14-10-2018 JV59_02695 e228c303e30dca050156b386b6da135a 1036 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 9.5E-279 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_02695 e228c303e30dca050156b386b6da135a 1036 Gene3D G3DSA:3.30.2090.10 703 791 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_02695 e228c303e30dca050156b386b6da135a 1036 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 14-10-2018 JV59_02695 e228c303e30dca050156b386b6da135a 1036 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_02695 e228c303e30dca050156b386b6da135a 1036 SUPERFAMILY SSF82866 291 489 3.14E-44 T 14-10-2018 JV59_02695 e228c303e30dca050156b386b6da135a 1036 SUPERFAMILY SSF82693 554 657 1.57E-16 T 14-10-2018 JV59_02695 e228c303e30dca050156b386b6da135a 1036 SUPERFAMILY SSF82693 139 324 8.89E-19 T 14-10-2018 JV59_02695 e228c303e30dca050156b386b6da135a 1036 SUPERFAMILY SSF82866 792 1008 3.4E-48 T 14-10-2018 JV59_02695 e228c303e30dca050156b386b6da135a 1036 SUPERFAMILY SSF82714 183 266 3.79E-14 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_02695 e228c303e30dca050156b386b6da135a 1036 SUPERFAMILY SSF82693 40 134 3.14E-25 T 14-10-2018 JV59_02695 e228c303e30dca050156b386b6da135a 1036 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.6E-70 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_02695 e228c303e30dca050156b386b6da135a 1036 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.6E-70 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_02695 e228c303e30dca050156b386b6da135a 1036 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.6E-70 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_02695 e228c303e30dca050156b386b6da135a 1036 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.6E-70 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_02695 e228c303e30dca050156b386b6da135a 1036 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.6E-70 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_02695 e228c303e30dca050156b386b6da135a 1036 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 1.6E-70 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_02695 e228c303e30dca050156b386b6da135a 1036 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.6E-70 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_02695 e228c303e30dca050156b386b6da135a 1036 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.6E-70 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_02695 e228c303e30dca050156b386b6da135a 1036 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 1.6E-70 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_02695 e228c303e30dca050156b386b6da135a 1036 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 14-10-2018 JV59_02695 e228c303e30dca050156b386b6da135a 1036 SUPERFAMILY SSF82714 704 788 3.4E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_02695 e228c303e30dca050156b386b6da135a 1036 Gene3D G3DSA:1.20.1640.10 502 1005 0.0 T 14-10-2018 JV59_21680 8616004d4b210c75bcac3768b654f2e3 563 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_21680 8616004d4b210c75bcac3768b654f2e3 563 Gene3D G3DSA:3.40.50.300 1 256 2.9E-67 T 14-10-2018 JV59_21680 8616004d4b210c75bcac3768b654f2e3 563 Gene3D G3DSA:3.40.50.300 295 562 7.1E-66 T 14-10-2018 JV59_21680 8616004d4b210c75bcac3768b654f2e3 563 SUPERFAMILY SSF52540 3 234 3.12E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_21680 8616004d4b210c75bcac3768b654f2e3 563 Pfam PF00005 ABC transporter 314 460 5.5E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_21680 8616004d4b210c75bcac3768b654f2e3 563 ProSitePatterns PS00211 ABC transporters family signature. 432 446 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_21680 8616004d4b210c75bcac3768b654f2e3 563 Pfam PF12558 ATP-binding cassette cobalt transporter 234 305 4.2E-16 T 14-10-2018 IPR022216 Putative ABC cobalt transporter JV59_21680 8616004d4b210c75bcac3768b654f2e3 563 SUPERFAMILY SSF52540 297 526 3.48E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_21680 8616004d4b210c75bcac3768b654f2e3 563 Pfam PF00005 ABC transporter 20 170 1.3E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_21680 8616004d4b210c75bcac3768b654f2e3 563 SMART SM00382 29 221 1.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_21680 8616004d4b210c75bcac3768b654f2e3 563 SMART SM00382 323 509 1.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_01390 c2977f322901fb978750835b722537bc 182 Gene3D G3DSA:2.40.30.60 4 100 4.1E-32 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 JV59_01390 c2977f322901fb978750835b722537bc 182 Gene3D G3DSA:2.30.30.240 101 182 2.8E-32 T 14-10-2018 JV59_01390 c2977f322901fb978750835b722537bc 182 Pfam PF05239 PRC-barrel domain 103 176 3.1E-13 T 14-10-2018 IPR027275 PRC-barrel domain JV59_01390 c2977f322901fb978750835b722537bc 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 1.7E-57 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 JV59_01390 c2977f322901fb978750835b722537bc 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 24.766 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 JV59_01390 c2977f322901fb978750835b722537bc 182 SUPERFAMILY SSF50447 13 100 5.3E-24 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JV59_01390 c2977f322901fb978750835b722537bc 182 SUPERFAMILY SSF50346 106 182 4.4E-20 T 14-10-2018 IPR011033 PRC-barrel-like superfamily JV59_01390 c2977f322901fb978750835b722537bc 182 Pfam PF01782 RimM N-terminal domain 15 95 3.5E-25 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 JV59_23200 565e54019f1683a0f96159929872a41a 389 SUPERFAMILY SSF58104 84 326 3.92E-38 T 14-10-2018 JV59_23200 565e54019f1683a0f96159929872a41a 389 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 170 300 9.0E-24 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_23200 565e54019f1683a0f96159929872a41a 389 Gene3D G3DSA:1.10.287.950 53 317 3.2E-35 T 14-10-2018 JV59_23200 565e54019f1683a0f96159929872a41a 389 SMART SM00283 101 365 4.2E-7 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_32510 b56afc7bb5f03f51ab616976fa985e32 332 TIGRFAM TIGR01227 hutG: formimidoylglutamase 13 327 1.1E-113 T 14-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 JV59_32510 b56afc7bb5f03f51ab616976fa985e32 332 SUPERFAMILY SSF52768 13 329 9.36E-85 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily JV59_32510 b56afc7bb5f03f51ab616976fa985e32 332 Gene3D G3DSA:3.40.800.10 5 332 3.8E-127 T 14-10-2018 JV59_32510 b56afc7bb5f03f51ab616976fa985e32 332 Pfam PF00491 Arginase family 46 325 3.4E-63 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 JV59_32510 b56afc7bb5f03f51ab616976fa985e32 332 ProSitePatterns PS01053 Arginase family signature. 255 276 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 JV59_32510 b56afc7bb5f03f51ab616976fa985e32 332 PIRSF PIRSF036979 24 332 1.5E-27 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 JV59_32510 b56afc7bb5f03f51ab616976fa985e32 332 Hamap MF_00737 Formimidoylglutamase [hutG]. 8 327 43.016 T 14-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 JV59_22145 e8ed6e7542e317a4d8034eedaaee53f0 305 Pfam PF12833 Helix-turn-helix domain 222 300 1.3E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_22145 e8ed6e7542e317a4d8034eedaaee53f0 305 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 268 283 8.7E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_22145 e8ed6e7542e317a4d8034eedaaee53f0 305 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 283 299 8.7E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_22145 e8ed6e7542e317a4d8034eedaaee53f0 305 SMART SM00342 216 299 7.4E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_22145 e8ed6e7542e317a4d8034eedaaee53f0 305 SUPERFAMILY SSF46689 255 301 2.06E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_22145 e8ed6e7542e317a4d8034eedaaee53f0 305 Gene3D G3DSA:1.10.10.60 201 304 4.3E-24 T 14-10-2018 JV59_37965 e4b272791242cb59642f2391cf7bba58 197 Gene3D G3DSA:3.40.50.360 14 190 8.2E-57 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_37965 e4b272791242cb59642f2391cf7bba58 197 SUPERFAMILY SSF52218 14 184 4.19E-50 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_37965 e4b272791242cb59642f2391cf7bba58 197 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 10 192 48.639 T 14-10-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 JV59_37965 e4b272791242cb59642f2391cf7bba58 197 Pfam PF02525 Flavodoxin-like fold 14 181 1.2E-45 T 14-10-2018 IPR003680 Flavodoxin-like fold JV59_35490 41fdafe994439396681cbf30930851fd 401 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 401 1.1E-187 T 14-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 JV59_35490 41fdafe994439396681cbf30930851fd 401 SUPERFAMILY SSF51230 1 96 1.7E-24 T 14-10-2018 IPR011053 Single hybrid motif JV59_35490 41fdafe994439396681cbf30930851fd 401 SUPERFAMILY SSF52777 172 400 4.4E-90 T 14-10-2018 JV59_35490 41fdafe994439396681cbf30930851fd 401 Gene3D G3DSA:4.10.320.10 102 152 2.2E-23 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 JV59_35490 41fdafe994439396681cbf30930851fd 401 Pfam PF02817 e3 binding domain 113 146 4.0E-13 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 JV59_35490 41fdafe994439396681cbf30930851fd 401 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 JV59_35490 41fdafe994439396681cbf30930851fd 401 Gene3D G3DSA:3.30.559.10 169 401 9.7E-98 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JV59_35490 41fdafe994439396681cbf30930851fd 401 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 171 399 5.5E-82 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 JV59_35490 41fdafe994439396681cbf30930851fd 401 SUPERFAMILY SSF47005 106 150 3.53E-12 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 JV59_35490 41fdafe994439396681cbf30930851fd 401 Gene3D G3DSA:2.40.50.100 1 79 4.5E-22 T 14-10-2018 JV59_35490 41fdafe994439396681cbf30930851fd 401 Pfam PF00364 Biotin-requiring enzyme 4 76 1.6E-18 T 14-10-2018 IPR000089 Biotin/lipoyl attachment JV59_23730 ba233a36e5c5c3ea47a6d49b1da9a4f8 704 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 45 - T 14-10-2018 IPR010916 TonB box, conserved site JV59_23730 ba233a36e5c5c3ea47a6d49b1da9a4f8 704 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 161 3.5E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain JV59_23730 ba233a36e5c5c3ea47a6d49b1da9a4f8 704 Gene3D G3DSA:2.40.170.20 170 704 7.4E-132 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily JV59_23730 ba233a36e5c5c3ea47a6d49b1da9a4f8 704 SUPERFAMILY SSF56935 31 704 2.88E-136 T 14-10-2018 JV59_23730 ba233a36e5c5c3ea47a6d49b1da9a4f8 704 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 60 704 1.2E-123 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 JV59_23730 ba233a36e5c5c3ea47a6d49b1da9a4f8 704 Gene3D G3DSA:2.170.130.10 38 168 9.9E-34 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily JV59_23730 ba233a36e5c5c3ea47a6d49b1da9a4f8 704 Pfam PF00593 TonB dependent receptor 245 702 2.3E-54 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel JV59_29060 4b7052fbb5ba6cc0428177474a5eb7b1 401 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 388 1.4E-117 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 JV59_29060 4b7052fbb5ba6cc0428177474a5eb7b1 401 PIRSF PIRSF001434 1 391 1.1E-125 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 JV59_29060 4b7052fbb5ba6cc0428177474a5eb7b1 401 Gene3D G3DSA:3.90.1150.10 256 390 1.0E-39 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_29060 4b7052fbb5ba6cc0428177474a5eb7b1 401 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 389 8.8E-174 T 14-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 JV59_29060 4b7052fbb5ba6cc0428177474a5eb7b1 401 Gene3D G3DSA:3.40.640.10 3 255 7.9E-79 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_29060 4b7052fbb5ba6cc0428177474a5eb7b1 401 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 JV59_29060 4b7052fbb5ba6cc0428177474a5eb7b1 401 SUPERFAMILY SSF53383 22 388 1.6E-100 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_23425 e567b50c11b8eceaf38773c125630ce9 217 Gene3D G3DSA:3.30.530.20 63 208 6.6E-15 T 14-10-2018 IPR023393 START-like domain superfamily JV59_23425 e567b50c11b8eceaf38773c125630ce9 217 SUPERFAMILY SSF55961 60 194 7.78E-12 T 14-10-2018 JV59_23425 e567b50c11b8eceaf38773c125630ce9 217 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 65 186 3.6E-10 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase JV59_38900 d1ebbf4ef14110c97cc5bde45ecf6290 494 Gene3D G3DSA:3.40.50.300 220 494 1.8E-129 T 14-10-2018 JV59_38900 d1ebbf4ef14110c97cc5bde45ecf6290 494 Gene3D G3DSA:3.30.450.90 85 219 3.0E-55 T 14-10-2018 JV59_38900 d1ebbf4ef14110c97cc5bde45ecf6290 494 Gene3D G3DSA:3.30.300.160 2 84 4.8E-33 T 14-10-2018 JV59_38900 d1ebbf4ef14110c97cc5bde45ecf6290 494 SMART SM00382 247 370 2.9E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_38900 d1ebbf4ef14110c97cc5bde45ecf6290 494 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 8 491 3.4E-230 T 14-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 JV59_38900 d1ebbf4ef14110c97cc5bde45ecf6290 494 Pfam PF00437 Type II/IV secretion system protein 121 386 1.6E-91 T 14-10-2018 IPR001482 Type II/IV secretion system protein JV59_38900 d1ebbf4ef14110c97cc5bde45ecf6290 494 SUPERFAMILY SSF160246 8 72 2.17E-16 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily JV59_38900 d1ebbf4ef14110c97cc5bde45ecf6290 494 SUPERFAMILY SSF52540 101 491 9.93E-108 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_38900 d1ebbf4ef14110c97cc5bde45ecf6290 494 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 314 328 - T 14-10-2018 IPR001482 Type II/IV secretion system protein JV59_35185 848f554b4c3dc4dba400269c6878fc61 136 Gene3D G3DSA:2.30.330.10 44 136 4.3E-33 T 14-10-2018 IPR036429 SpoA-like superfamily JV59_35185 848f554b4c3dc4dba400269c6878fc61 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 4.2E-27 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 JV59_35185 848f554b4c3dc4dba400269c6878fc61 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 4.2E-27 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 JV59_35185 848f554b4c3dc4dba400269c6878fc61 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 4.2E-27 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 JV59_35185 848f554b4c3dc4dba400269c6878fc61 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 4.2E-27 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 JV59_35185 848f554b4c3dc4dba400269c6878fc61 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 128 1.0E-32 T 14-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 JV59_35185 848f554b4c3dc4dba400269c6878fc61 136 SUPERFAMILY SSF101801 54 134 3.4E-24 T 14-10-2018 IPR036429 SpoA-like superfamily JV59_35185 848f554b4c3dc4dba400269c6878fc61 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 1.0E-23 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) JV59_01055 78dcd84c7b37c2abe2d51ac429e97207 664 SMART SM00861 354 525 4.3E-65 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JV59_01055 78dcd84c7b37c2abe2d51ac429e97207 664 SUPERFAMILY SSF52518 6 329 5.63E-119 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_01055 78dcd84c7b37c2abe2d51ac429e97207 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 JV59_01055 78dcd84c7b37c2abe2d51ac429e97207 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 333 2.8E-166 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JV59_01055 78dcd84c7b37c2abe2d51ac429e97207 664 Gene3D G3DSA:3.40.50.920 538 664 1.6E-45 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JV59_01055 78dcd84c7b37c2abe2d51ac429e97207 664 SUPERFAMILY SSF52922 533 664 9.55E-44 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JV59_01055 78dcd84c7b37c2abe2d51ac429e97207 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JV59_01055 78dcd84c7b37c2abe2d51ac429e97207 664 SUPERFAMILY SSF52518 335 526 1.3E-66 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_01055 78dcd84c7b37c2abe2d51ac429e97207 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JV59_01055 78dcd84c7b37c2abe2d51ac429e97207 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 2.7E-47 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JV59_01055 78dcd84c7b37c2abe2d51ac429e97207 664 Gene3D G3DSA:3.40.50.970 326 537 2.4E-83 T 14-10-2018 JV59_01055 78dcd84c7b37c2abe2d51ac429e97207 664 Gene3D G3DSA:3.40.50.970 1 325 3.5E-130 T 14-10-2018 JV59_01055 78dcd84c7b37c2abe2d51ac429e97207 664 Pfam PF02780 Transketolase, C-terminal domain 541 655 2.6E-20 T 14-10-2018 IPR033248 Transketolase, C-terminal domain JV59_38225 abeafa4f66190183e4ea74697a3e9430 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 JV59_38225 abeafa4f66190183e4ea74697a3e9430 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 9.5E-34 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JV59_38225 abeafa4f66190183e4ea74697a3e9430 90 Gene3D G3DSA:4.10.520.10 1 90 1.1E-37 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 JV59_38225 abeafa4f66190183e4ea74697a3e9430 90 SMART SM00411 1 90 7.7E-47 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JV59_38225 abeafa4f66190183e4ea74697a3e9430 90 SUPERFAMILY SSF47729 1 90 3.97E-33 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 JV59_38225 abeafa4f66190183e4ea74697a3e9430 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.8E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JV59_38225 abeafa4f66190183e4ea74697a3e9430 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.8E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JV59_38225 abeafa4f66190183e4ea74697a3e9430 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.8E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JV59_25930 e7f78f7046e5d30990685d186e7c2062 294 Gene3D G3DSA:3.60.10.10 44 293 5.7E-69 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JV59_25930 e7f78f7046e5d30990685d186e7c2062 294 PRINTS PR00130 DNase I signature 54 83 3.1E-28 T 14-10-2018 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 JV59_25930 e7f78f7046e5d30990685d186e7c2062 294 PRINTS PR00130 DNase I signature 271 291 3.1E-28 T 14-10-2018 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 JV59_25930 e7f78f7046e5d30990685d186e7c2062 294 PRINTS PR00130 DNase I signature 193 222 3.1E-28 T 14-10-2018 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 JV59_25930 e7f78f7046e5d30990685d186e7c2062 294 PRINTS PR00130 DNase I signature 84 113 3.1E-28 T 14-10-2018 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 JV59_25930 e7f78f7046e5d30990685d186e7c2062 294 PRINTS PR00130 DNase I signature 163 192 3.1E-28 T 14-10-2018 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 JV59_25930 e7f78f7046e5d30990685d186e7c2062 294 SMART SM00476 23 294 8.8E-52 T 14-10-2018 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 JV59_25930 e7f78f7046e5d30990685d186e7c2062 294 SUPERFAMILY SSF56219 44 293 1.7E-30 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JV59_25930 e7f78f7046e5d30990685d186e7c2062 294 PIRSF PIRSF000988 37 294 3.8E-72 T 14-10-2018 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 JV59_25930 e7f78f7046e5d30990685d186e7c2062 294 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 48 227 5.6E-15 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase JV59_21395 77b829d60414f4aca1977e3d3e9fb4d2 291 Gene3D G3DSA:1.10.10.10 5 93 1.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_21395 77b829d60414f4aca1977e3d3e9fb4d2 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.2E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_21395 77b829d60414f4aca1977e3d3e9fb4d2 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.2E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_21395 77b829d60414f4aca1977e3d3e9fb4d2 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.2E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_21395 77b829d60414f4aca1977e3d3e9fb4d2 291 SUPERFAMILY SSF53850 97 291 2.53E-19 T 14-10-2018 JV59_21395 77b829d60414f4aca1977e3d3e9fb4d2 291 Gene3D G3DSA:3.40.190.10 98 288 7.7E-39 T 14-10-2018 JV59_21395 77b829d60414f4aca1977e3d3e9fb4d2 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 1.8E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_21395 77b829d60414f4aca1977e3d3e9fb4d2 291 Gene3D G3DSA:3.40.190.10 160 262 7.7E-39 T 14-10-2018 JV59_21395 77b829d60414f4aca1977e3d3e9fb4d2 291 Pfam PF03466 LysR substrate binding domain 89 290 4.0E-22 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_21395 77b829d60414f4aca1977e3d3e9fb4d2 291 SUPERFAMILY SSF46785 2 85 1.88E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_17380 15dc097e74181a16ce46eebc56745792 284 Pfam PF01497 Periplasmic binding protein 28 257 6.0E-36 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain JV59_17380 15dc097e74181a16ce46eebc56745792 284 Gene3D G3DSA:3.40.50.1980 143 284 2.2E-42 T 14-10-2018 JV59_17380 15dc097e74181a16ce46eebc56745792 284 SUPERFAMILY SSF53807 26 280 1.37E-44 T 14-10-2018 JV59_17380 15dc097e74181a16ce46eebc56745792 284 Gene3D G3DSA:3.40.50.1980 21 142 1.5E-33 T 14-10-2018 JV59_32120 2d3143596d717a0b09a8d23794476453 251 Gene3D G3DSA:3.40.50.300 11 250 4.5E-54 T 14-10-2018 JV59_32120 2d3143596d717a0b09a8d23794476453 251 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 1 251 43.247 T 14-10-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 JV59_32120 2d3143596d717a0b09a8d23794476453 251 Pfam PF00005 ABC transporter 15 164 5.5E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_32120 2d3143596d717a0b09a8d23794476453 251 SUPERFAMILY SSF52540 16 227 1.45E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_32120 2d3143596d717a0b09a8d23794476453 251 SMART SM00382 22 219 1.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_36535 f56eabd763ec2f071fdf534e0e65598d 392 SUPERFAMILY SSF55021 284 381 2.47E-24 T 14-10-2018 JV59_36535 f56eabd763ec2f071fdf534e0e65598d 392 Gene3D G3DSA:3.40.190.10 113 287 2.4E-55 T 14-10-2018 JV59_36535 f56eabd763ec2f071fdf534e0e65598d 392 Gene3D G3DSA:1.20.59.10 2 112 1.4E-30 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JV59_36535 f56eabd763ec2f071fdf534e0e65598d 392 PIRSF PIRSF001500 1 384 1.7E-143 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 JV59_36535 f56eabd763ec2f071fdf534e0e65598d 392 Gene3D G3DSA:3.30.70.260 295 383 1.9E-24 T 14-10-2018 JV59_36535 f56eabd763ec2f071fdf534e0e65598d 392 Gene3D G3DSA:3.40.190.10 193 278 2.4E-55 T 14-10-2018 JV59_36535 f56eabd763ec2f071fdf534e0e65598d 392 SUPERFAMILY SSF53850 109 295 5.97E-56 T 14-10-2018 JV59_36535 f56eabd763ec2f071fdf534e0e65598d 392 SUPERFAMILY SSF48600 7 95 7.33E-19 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JV59_36535 f56eabd763ec2f071fdf534e0e65598d 392 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 265 287 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 JV59_36535 f56eabd763ec2f071fdf534e0e65598d 392 SMART SM00830 12 93 3.4E-20 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JV59_36535 f56eabd763ec2f071fdf534e0e65598d 392 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 9 91 8.9E-28 T 14-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 JV59_36535 f56eabd763ec2f071fdf534e0e65598d 392 Pfam PF00800 Prephenate dehydratase 110 291 2.9E-60 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 JV59_36535 f56eabd763ec2f071fdf534e0e65598d 392 Pfam PF01817 Chorismate mutase type II 12 91 4.0E-16 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JV59_34270 f3abbc7d5ecdfe74ce92653f03fc2ef5 142 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 32 135 3.7E-41 T 14-10-2018 IPR039366 YscW/ExsB JV59_35145 8367e2c3c20bcbc72c0aab2711d16198 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.2E-143 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JV59_35145 8367e2c3c20bcbc72c0aab2711d16198 361 Pfam PF01264 Chorismate synthase 10 345 3.4E-144 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JV59_35145 8367e2c3c20bcbc72c0aab2711d16198 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JV59_35145 8367e2c3c20bcbc72c0aab2711d16198 361 PIRSF PIRSF001456 3 360 2.4E-143 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JV59_35145 8367e2c3c20bcbc72c0aab2711d16198 361 Gene3D G3DSA:3.60.150.10 1 361 7.3E-161 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JV59_35145 8367e2c3c20bcbc72c0aab2711d16198 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JV59_35145 8367e2c3c20bcbc72c0aab2711d16198 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JV59_35145 8367e2c3c20bcbc72c0aab2711d16198 361 SUPERFAMILY SSF103263 4 354 8.9E-150 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JV59_35145 8367e2c3c20bcbc72c0aab2711d16198 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.773 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JV59_30455 73b041dc8e62a29c1aefad4b1a400eb2 107 Gene3D G3DSA:2.102.10.10 1 107 3.1E-31 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JV59_30455 73b041dc8e62a29c1aefad4b1a400eb2 107 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 106 1.4E-37 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 JV59_30455 73b041dc8e62a29c1aefad4b1a400eb2 107 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 4 106 2.2E-32 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 JV59_30455 73b041dc8e62a29c1aefad4b1a400eb2 107 SUPERFAMILY SSF50022 1 106 3.93E-33 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JV59_18860 6d2346ae8a478a0ca909633c7811484e 313 TIGRFAM TIGR02036 dsdC: D-serine deaminase transcriptional activator 10 309 3.8E-110 T 14-10-2018 IPR011781 D-serine deaminase transcriptional activator JV59_18860 6d2346ae8a478a0ca909633c7811484e 313 SUPERFAMILY SSF46785 16 97 3.05E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_18860 6d2346ae8a478a0ca909633c7811484e 313 Gene3D G3DSA:3.40.190.10 173 278 5.4E-48 T 14-10-2018 JV59_18860 6d2346ae8a478a0ca909633c7811484e 313 Gene3D G3DSA:1.10.10.10 16 103 3.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_18860 6d2346ae8a478a0ca909633c7811484e 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 19 77 4.4E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_18860 6d2346ae8a478a0ca909633c7811484e 313 Pfam PF03466 LysR substrate binding domain 100 309 9.6E-29 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_18860 6d2346ae8a478a0ca909633c7811484e 313 SUPERFAMILY SSF53850 94 309 8.51E-31 T 14-10-2018 JV59_18860 6d2346ae8a478a0ca909633c7811484e 313 Gene3D G3DSA:3.40.190.10 113 305 5.4E-48 T 14-10-2018 JV59_23640 655514dd3e3b289d984981f6ceeeb7d3 193 SUPERFAMILY SSF52218 1 192 6.99E-52 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_23640 655514dd3e3b289d984981f6ceeeb7d3 193 Pfam PF02525 Flavodoxin-like fold 3 191 1.9E-40 T 14-10-2018 IPR003680 Flavodoxin-like fold JV59_23640 655514dd3e3b289d984981f6ceeeb7d3 193 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 193 28.817 T 14-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 JV59_23640 655514dd3e3b289d984981f6ceeeb7d3 193 Gene3D G3DSA:3.40.50.360 1 193 3.5E-54 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_23395 c27d15ff65aa7b63159f169ba6b38921 248 Pfam PF00005 ABC transporter 26 163 5.3E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_23395 c27d15ff65aa7b63159f169ba6b38921 248 Gene3D G3DSA:3.40.50.300 7 241 1.1E-55 T 14-10-2018 JV59_23395 c27d15ff65aa7b63159f169ba6b38921 248 SUPERFAMILY SSF52540 7 210 2.08E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_23395 c27d15ff65aa7b63159f169ba6b38921 248 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_23395 c27d15ff65aa7b63159f169ba6b38921 248 SMART SM00382 34 210 1.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_01420 7cc30e8bc63a1ff7b34e7c476d30619b 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 3.6E-29 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial JV59_01420 7cc30e8bc63a1ff7b34e7c476d30619b 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 3.6E-29 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial JV59_01420 7cc30e8bc63a1ff7b34e7c476d30619b 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 3.6E-29 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial JV59_01420 7cc30e8bc63a1ff7b34e7c476d30619b 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 3.6E-29 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial JV59_01420 7cc30e8bc63a1ff7b34e7c476d30619b 289 Pfam PF01478 Type IV leader peptidase family 135 244 2.0E-27 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 JV59_01420 7cc30e8bc63a1ff7b34e7c476d30619b 289 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 6.3E-35 T 14-10-2018 IPR010627 Peptidase A24A, N-terminal JV59_01420 7cc30e8bc63a1ff7b34e7c476d30619b 289 Gene3D G3DSA:1.20.120.1220 105 281 2.5E-5 T 14-10-2018 JV59_21310 5ceb926be013957e8d56c515fd8256ed 417 Pfam PF01551 Peptidase family M23 276 369 4.3E-31 T 14-10-2018 IPR016047 Peptidase M23 JV59_21310 5ceb926be013957e8d56c515fd8256ed 417 SUPERFAMILY SSF51261 127 371 2.25E-66 T 14-10-2018 IPR011055 Duplicated hybrid motif JV59_21310 5ceb926be013957e8d56c515fd8256ed 417 Gene3D G3DSA:3.10.450.350 141 245 1.7E-33 T 14-10-2018 JV59_21310 5ceb926be013957e8d56c515fd8256ed 417 Gene3D G3DSA:3.10.450.350 47 140 8.6E-34 T 14-10-2018 JV59_21310 5ceb926be013957e8d56c515fd8256ed 417 Gene3D G3DSA:2.70.70.10 246 376 1.8E-47 T 14-10-2018 IPR011055 Duplicated hybrid motif JV59_21310 5ceb926be013957e8d56c515fd8256ed 417 Pfam PF04225 Opacity-associated protein A LysM-like domain 54 135 4.0E-6 T 14-10-2018 IPR007340 Opacity-associated protein A JV59_00285 b7e286291b2d2f8df0395ccfa6937eea 384 Pfam PF01551 Peptidase family M23 285 378 2.8E-23 T 14-10-2018 IPR016047 Peptidase M23 JV59_00285 b7e286291b2d2f8df0395ccfa6937eea 384 Gene3D G3DSA:2.70.70.10 246 384 7.8E-33 T 14-10-2018 IPR011055 Duplicated hybrid motif JV59_00285 b7e286291b2d2f8df0395ccfa6937eea 384 SUPERFAMILY SSF51261 172 382 2.62E-46 T 14-10-2018 IPR011055 Duplicated hybrid motif JV59_30395 fd68f55bf40e2d62d15918daf1d951c8 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 133 2.1E-29 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 JV59_30395 fd68f55bf40e2d62d15918daf1d951c8 134 Gene3D G3DSA:3.30.420.270 61 129 7.5E-12 T 14-10-2018 JV59_13965 782349e4ab9dd8f490d85e404e657d8f 366 Pfam PF00571 CBS domain 262 313 4.5E-6 T 14-10-2018 IPR000644 CBS domain JV59_13965 782349e4ab9dd8f490d85e404e657d8f 366 Pfam PF01595 Domain of unknown function DUF21 10 177 2.9E-28 T 14-10-2018 IPR002550 CNNM, transmembrane domain JV59_13965 782349e4ab9dd8f490d85e404e657d8f 366 Gene3D G3DSA:3.10.580.10 186 315 6.2E-39 T 14-10-2018 JV59_13965 782349e4ab9dd8f490d85e404e657d8f 366 SUPERFAMILY SSF54631 181 315 1.11E-24 T 14-10-2018 JV59_22960 855376868e4bff5ea5027b234c290812 590 Gene3D G3DSA:3.40.50.970 359 582 1.5E-64 T 14-10-2018 JV59_22960 855376868e4bff5ea5027b234c290812 590 SUPERFAMILY SSF52518 369 568 7.74E-52 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_22960 855376868e4bff5ea5027b234c290812 590 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 553 1.1E-34 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JV59_22960 855376868e4bff5ea5027b234c290812 590 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 2 587 0.0 T 14-10-2018 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47 JV59_22960 855376868e4bff5ea5027b234c290812 590 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 172 1.6E-52 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 JV59_22960 855376868e4bff5ea5027b234c290812 590 SUPERFAMILY SSF52518 3 186 2.59E-50 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_22960 855376868e4bff5ea5027b234c290812 590 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 329 1.8E-32 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 JV59_22960 855376868e4bff5ea5027b234c290812 590 Gene3D G3DSA:3.40.50.970 2 171 2.6E-66 T 14-10-2018 JV59_22960 855376868e4bff5ea5027b234c290812 590 Gene3D G3DSA:3.40.50.1220 186 358 9.6E-46 T 14-10-2018 JV59_22960 855376868e4bff5ea5027b234c290812 590 SUPERFAMILY SSF52467 161 340 9.27E-46 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JV59_31160 64ed4778c718bdf2a5cf3636d9404ae0 350 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 2 343 5.3E-118 T 14-10-2018 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 JV59_31160 64ed4778c718bdf2a5cf3636d9404ae0 350 Pfam PF01312 FlhB HrpN YscU SpaS Family 3 340 3.5E-109 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JV59_31160 64ed4778c718bdf2a5cf3636d9404ae0 350 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 265 280 7.3E-43 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JV59_31160 64ed4778c718bdf2a5cf3636d9404ae0 350 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 5 27 7.3E-43 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JV59_31160 64ed4778c718bdf2a5cf3636d9404ae0 350 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 201 219 7.3E-43 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JV59_31160 64ed4778c718bdf2a5cf3636d9404ae0 350 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 221 238 7.3E-43 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JV59_31160 64ed4778c718bdf2a5cf3636d9404ae0 350 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 295 316 7.3E-43 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JV59_31160 64ed4778c718bdf2a5cf3636d9404ae0 350 SUPERFAMILY SSF160544 237 343 1.83E-35 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal JV59_31160 64ed4778c718bdf2a5cf3636d9404ae0 350 Gene3D G3DSA:3.40.1690.10 210 349 1.1E-52 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal JV59_00370 3d6453a63b5f7b2a39d10d176212c2c7 658 Pfam PF08676 MutL C terminal dimerisation domain 474 595 5.3E-26 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 JV59_00370 3d6453a63b5f7b2a39d10d176212c2c7 658 SUPERFAMILY SSF55874 1 204 1.14E-53 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_00370 3d6453a63b5f7b2a39d10d176212c2c7 658 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 119 2.1E-11 T 14-10-2018 JV59_00370 3d6453a63b5f7b2a39d10d176212c2c7 658 SMART SM01340 212 330 1.6E-56 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 JV59_00370 3d6453a63b5f7b2a39d10d176212c2c7 658 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 329 1.1E-39 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 JV59_00370 3d6453a63b5f7b2a39d10d176212c2c7 658 SUPERFAMILY SSF118116 474 655 1.83E-35 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily JV59_00370 3d6453a63b5f7b2a39d10d176212c2c7 658 Gene3D G3DSA:3.30.230.10 217 329 7.9E-40 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JV59_00370 3d6453a63b5f7b2a39d10d176212c2c7 658 SUPERFAMILY SSF54211 191 329 2.58E-36 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JV59_00370 3d6453a63b5f7b2a39d10d176212c2c7 658 SMART SM00853 477 618 4.1E-9 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 JV59_00370 3d6453a63b5f7b2a39d10d176212c2c7 658 Gene3D G3DSA:3.30.1370.100 518 610 6.9E-52 T 14-10-2018 JV59_00370 3d6453a63b5f7b2a39d10d176212c2c7 658 Gene3D G3DSA:2.30.42.20 474 655 6.9E-52 T 14-10-2018 JV59_00370 3d6453a63b5f7b2a39d10d176212c2c7 658 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site JV59_00370 3d6453a63b5f7b2a39d10d176212c2c7 658 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 656 24.884 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 JV59_00370 3d6453a63b5f7b2a39d10d176212c2c7 658 Gene3D G3DSA:3.30.565.10 1 216 5.8E-71 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_00370 3d6453a63b5f7b2a39d10d176212c2c7 658 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 6.4E-102 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 JV59_01005 a3e5390fe3a27cb884aae407ca8d56fb 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 336 3.0E-151 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 JV59_01005 a3e5390fe3a27cb884aae407ca8d56fb 345 Gene3D G3DSA:3.30.450.90 1 100 3.6E-35 T 14-10-2018 JV59_01005 a3e5390fe3a27cb884aae407ca8d56fb 345 Gene3D G3DSA:3.40.50.300 101 344 1.1E-100 T 14-10-2018 JV59_01005 a3e5390fe3a27cb884aae407ca8d56fb 345 Pfam PF00437 Type II/IV secretion system protein 12 270 1.7E-46 T 14-10-2018 IPR001482 Type II/IV secretion system protein JV59_01005 a3e5390fe3a27cb884aae407ca8d56fb 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 14-10-2018 IPR001482 Type II/IV secretion system protein JV59_01005 a3e5390fe3a27cb884aae407ca8d56fb 345 SUPERFAMILY SSF52540 6 336 1.15E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_30965 f0c83e252539f87d3ce15cc9f6d14218 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 1.7E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_30965 f0c83e252539f87d3ce15cc9f6d14218 293 Gene3D G3DSA:3.40.190.290 95 284 5.6E-27 T 14-10-2018 JV59_30965 f0c83e252539f87d3ce15cc9f6d14218 293 Pfam PF03466 LysR substrate binding domain 93 282 1.1E-18 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_30965 f0c83e252539f87d3ce15cc9f6d14218 293 SUPERFAMILY SSF46785 6 110 4.03E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_30965 f0c83e252539f87d3ce15cc9f6d14218 293 SUPERFAMILY SSF53850 94 288 9.05E-25 T 14-10-2018 JV59_30965 f0c83e252539f87d3ce15cc9f6d14218 293 Gene3D G3DSA:1.10.10.10 6 88 2.0E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_28365 ac30e73752800e7278f852fcd062c821 267 Gene3D G3DSA:3.40.50.1820 7 264 9.3E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_28365 ac30e73752800e7278f852fcd062c821 267 Pfam PF00561 alpha/beta hydrolase fold 19 121 2.4E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_28365 ac30e73752800e7278f852fcd062c821 267 PRINTS PR00412 Epoxide hydrolase signature 24 42 7.3E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JV59_28365 ac30e73752800e7278f852fcd062c821 267 PRINTS PR00412 Epoxide hydrolase signature 237 259 7.3E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JV59_28365 ac30e73752800e7278f852fcd062c821 267 PRINTS PR00412 Epoxide hydrolase signature 205 221 7.3E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JV59_28365 ac30e73752800e7278f852fcd062c821 267 SUPERFAMILY SSF53474 11 262 1.19E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_20145 b016168ce29ec8132b2044d92424bbff 218 SUPERFAMILY SSF52833 3 213 1.46E-48 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_20145 b016168ce29ec8132b2044d92424bbff 218 Pfam PF01323 DSBA-like thioredoxin domain 5 207 7.2E-37 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 JV59_20145 b016168ce29ec8132b2044d92424bbff 218 Gene3D G3DSA:3.40.30.10 1 211 8.2E-66 T 14-10-2018 JV59_29030 9c4d2c8fb4b6b7238f24dad4496f60d4 343 Gene3D G3DSA:1.10.287.470 90 149 5.7E-74 T 14-10-2018 JV59_29030 9c4d2c8fb4b6b7238f24dad4496f60d4 343 Gene3D G3DSA:2.40.420.20 35 334 5.7E-74 T 14-10-2018 JV59_29030 9c4d2c8fb4b6b7238f24dad4496f60d4 343 Pfam PF13437 HlyD family secretion protein 154 257 1.8E-10 T 14-10-2018 JV59_29030 9c4d2c8fb4b6b7238f24dad4496f60d4 343 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 337 3.8E-84 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 JV59_29030 9c4d2c8fb4b6b7238f24dad4496f60d4 343 SUPERFAMILY SSF111369 47 264 2.09E-30 T 14-10-2018 JV59_29030 9c4d2c8fb4b6b7238f24dad4496f60d4 343 Gene3D G3DSA:2.40.50.100 56 188 5.7E-74 T 14-10-2018 JV59_29030 9c4d2c8fb4b6b7238f24dad4496f60d4 343 Pfam PF13533 Biotin-lipoyl like 60 103 2.7E-7 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain JV59_29030 9c4d2c8fb4b6b7238f24dad4496f60d4 343 Gene3D G3DSA:2.40.30.170 41 267 5.7E-74 T 14-10-2018 JV59_26970 f13985fe0a64ec31737eca2f77124ad7 281 SUPERFAMILY SSF56235 2 253 1.82E-51 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JV59_26970 f13985fe0a64ec31737eca2f77124ad7 281 Pfam PF13230 Glutamine amidotransferases class-II 1 255 7.3E-113 T 14-10-2018 IPR026869 Putative glutamine amidotransferase type 2 JV59_26970 f13985fe0a64ec31737eca2f77124ad7 281 Gene3D G3DSA:3.60.20.10 1 258 8.3E-99 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JV59_30445 93ae779634ab932aece88a7f8bcdb99e 514 Gene3D G3DSA:3.30.450.20 2 112 4.7E-22 T 14-10-2018 JV59_30445 93ae779634ab932aece88a7f8bcdb99e 514 SMART SM00283 256 513 2.8E-65 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_30445 93ae779634ab932aece88a7f8bcdb99e 514 SUPERFAMILY SSF58104 258 513 9.94E-69 T 14-10-2018 JV59_30445 93ae779634ab932aece88a7f8bcdb99e 514 SUPERFAMILY SSF55785 16 111 4.89E-23 T 14-10-2018 IPR035965 PAS domain superfamily JV59_30445 93ae779634ab932aece88a7f8bcdb99e 514 Pfam PF08447 PAS fold 27 111 8.9E-15 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 JV59_30445 93ae779634ab932aece88a7f8bcdb99e 514 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 107 1.3E-10 T 14-10-2018 IPR000014 PAS domain JV59_30445 93ae779634ab932aece88a7f8bcdb99e 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 379 408 1.4E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_30445 93ae779634ab932aece88a7f8bcdb99e 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 273 302 1.4E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_30445 93ae779634ab932aece88a7f8bcdb99e 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 350 377 1.4E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_30445 93ae779634ab932aece88a7f8bcdb99e 514 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 480 1.9E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_30445 93ae779634ab932aece88a7f8bcdb99e 514 Gene3D G3DSA:1.10.287.950 189 514 8.4E-61 T 14-10-2018 JV59_00075 d8d9fe2cd060b180702176c2282f9efe 170 Pfam PF04351 Pilus assembly protein, PilP 57 169 1.5E-23 T 14-10-2018 IPR007446 Pilus assembly protein PilP JV59_00075 d8d9fe2cd060b180702176c2282f9efe 170 Gene3D G3DSA:2.30.30.830 91 170 3.7E-19 T 14-10-2018 JV59_02490 86cc3f4d1aa113e834802fd5fb2e3f4e 801 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 801 25.781 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 JV59_02490 86cc3f4d1aa113e834802fd5fb2e3f4e 801 Gene3D G3DSA:3.10.20.310 347 424 7.3E-26 T 14-10-2018 JV59_02490 86cc3f4d1aa113e834802fd5fb2e3f4e 801 Gene3D G3DSA:3.10.20.310 18 91 3.4E-19 T 14-10-2018 JV59_02490 86cc3f4d1aa113e834802fd5fb2e3f4e 801 Pfam PF07244 Surface antigen variable number repeat 266 344 3.2E-10 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 JV59_02490 86cc3f4d1aa113e834802fd5fb2e3f4e 801 Pfam PF07244 Surface antigen variable number repeat 176 263 5.6E-16 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 JV59_02490 86cc3f4d1aa113e834802fd5fb2e3f4e 801 Pfam PF07244 Surface antigen variable number repeat 347 420 1.3E-17 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 JV59_02490 86cc3f4d1aa113e834802fd5fb2e3f4e 801 Pfam PF07244 Surface antigen variable number repeat 92 172 1.2E-10 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 JV59_02490 86cc3f4d1aa113e834802fd5fb2e3f4e 801 Gene3D G3DSA:3.10.20.310 266 346 4.5E-14 T 14-10-2018 JV59_02490 86cc3f4d1aa113e834802fd5fb2e3f4e 801 PIRSF PIRSF006076 1 801 3.1E-244 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 JV59_02490 86cc3f4d1aa113e834802fd5fb2e3f4e 801 Gene3D G3DSA:3.10.20.310 92 174 1.3E-16 T 14-10-2018 JV59_02490 86cc3f4d1aa113e834802fd5fb2e3f4e 801 Gene3D G3DSA:2.40.160.50 425 801 5.9E-121 T 14-10-2018 JV59_02490 86cc3f4d1aa113e834802fd5fb2e3f4e 801 Gene3D G3DSA:3.10.20.310 175 264 7.8E-23 T 14-10-2018 JV59_02490 86cc3f4d1aa113e834802fd5fb2e3f4e 801 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 801 5.0E-277 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 JV59_02490 86cc3f4d1aa113e834802fd5fb2e3f4e 801 Pfam PF01103 Surface antigen 448 801 2.7E-89 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 JV59_26335 2dc6410cc9449fcd0f6c5301efec151b 574 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 148 3.9E-23 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal JV59_26335 2dc6410cc9449fcd0f6c5301efec151b 574 SMART SM00382 314 435 0.0029 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_26335 2dc6410cc9449fcd0f6c5301efec151b 574 SUPERFAMILY SSF160246 2 145 2.22E-38 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily JV59_26335 2dc6410cc9449fcd0f6c5301efec151b 574 Pfam PF00437 Type II/IV secretion system protein 191 453 3.7E-77 T 14-10-2018 IPR001482 Type II/IV secretion system protein JV59_26335 2dc6410cc9449fcd0f6c5301efec151b 574 Gene3D G3DSA:3.30.450.90 147 286 3.4E-43 T 14-10-2018 JV59_26335 2dc6410cc9449fcd0f6c5301efec151b 574 Gene3D G3DSA:3.30.300.160 63 145 1.7E-5 T 14-10-2018 JV59_26335 2dc6410cc9449fcd0f6c5301efec151b 574 SUPERFAMILY SSF52540 169 559 1.95E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_26335 2dc6410cc9449fcd0f6c5301efec151b 574 Gene3D G3DSA:3.40.50.300 289 565 5.3E-100 T 14-10-2018 JV59_26335 2dc6410cc9449fcd0f6c5301efec151b 574 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 381 395 - T 14-10-2018 IPR001482 Type II/IV secretion system protein JV59_28565 1e39cfa2c8fa08f3c9665aebd0173468 323 SUPERFAMILY SSF56935 22 302 6.83E-21 T 14-10-2018 JV59_28565 1e39cfa2c8fa08f3c9665aebd0173468 323 Pfam PF13609 Gram-negative porin 7 294 4.5E-27 T 14-10-2018 JV59_28565 1e39cfa2c8fa08f3c9665aebd0173468 323 Gene3D G3DSA:2.40.160.10 23 323 1.6E-14 T 14-10-2018 IPR023614 Porin domain superfamily JV59_23885 a66fa0f19eeda8b9b34b0806a781a402 692 Gene3D G3DSA:3.30.450.20 34 214 1.3E-23 T 14-10-2018 JV59_23885 a66fa0f19eeda8b9b34b0806a781a402 692 Pfam PF02743 Cache domain 43 285 4.9E-14 T 14-10-2018 IPR033479 Double Cache domain 1 JV59_28520 23bcf98e5821d02c537a867efc9c6bec 280 Gene3D G3DSA:1.20.1080.10 27 280 6.7E-95 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 JV59_28520 23bcf98e5821d02c537a867efc9c6bec 280 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 279 1.3E-77 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 JV59_28520 23bcf98e5821d02c537a867efc9c6bec 280 Pfam PF01226 Formate/nitrite transporter 13 275 5.5E-74 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 JV59_28520 23bcf98e5821d02c537a867efc9c6bec 280 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 13 278 1.5E-114 T 14-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 JV59_28520 23bcf98e5821d02c537a867efc9c6bec 280 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site JV59_19950 7ea74a7753a7b8a103166d8d739776c5 332 Gene3D G3DSA:3.40.50.720 4 318 2.0E-134 T 14-10-2018 JV59_19950 7ea74a7753a7b8a103166d8d739776c5 332 SUPERFAMILY SSF51735 103 299 2.82E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_19950 7ea74a7753a7b8a103166d8d739776c5 332 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 298 3.2E-50 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 JV59_19950 7ea74a7753a7b8a103166d8d739776c5 332 Gene3D G3DSA:3.40.50.720 103 298 2.0E-134 T 14-10-2018 JV59_19950 7ea74a7753a7b8a103166d8d739776c5 332 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JV59_19950 7ea74a7753a7b8a103166d8d739776c5 332 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 327 2.5E-33 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 JV59_19950 7ea74a7753a7b8a103166d8d739776c5 332 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 JV59_19950 7ea74a7753a7b8a103166d8d739776c5 332 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JV59_19950 7ea74a7753a7b8a103166d8d739776c5 332 SUPERFAMILY SSF52283 1 136 9.99E-43 T 14-10-2018 JV59_37825 def95032192e67f4d1787806c79a36e7 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 1.5E-20 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain JV59_37825 def95032192e67f4d1787806c79a36e7 58 SUPERFAMILY SSF55129 1 58 5.49E-23 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily JV59_37825 def95032192e67f4d1787806c79a36e7 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 21.548 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37825 def95032192e67f4d1787806c79a36e7 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 5.4E-26 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37825 def95032192e67f4d1787806c79a36e7 58 Gene3D G3DSA:3.30.1390.20 1 58 2.3E-27 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily JV59_37825 def95032192e67f4d1787806c79a36e7 58 PIRSF PIRSF002211 1 58 3.5E-28 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37430 3f2bb3f2c53de536ecb13a92ef2f6e3d 84 Gene3D G3DSA:3.30.300.90 1 84 3.0E-32 T 14-10-2018 JV59_37430 3f2bb3f2c53de536ecb13a92ef2f6e3d 84 PIRSF PIRSF003113 2 83 8.6E-22 T 14-10-2018 IPR002634 BolA protein JV59_37430 3f2bb3f2c53de536ecb13a92ef2f6e3d 84 Pfam PF01722 BolA-like protein 20 74 3.7E-14 T 14-10-2018 IPR002634 BolA protein JV59_37430 3f2bb3f2c53de536ecb13a92ef2f6e3d 84 SUPERFAMILY SSF82657 4 82 8.37E-28 T 14-10-2018 IPR036065 BolA-like superfamily JV59_27780 583d091dbfec69a01f1737dc6158543e 375 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 1.6E-115 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JV59_27780 583d091dbfec69a01f1737dc6158543e 375 Gene3D G3DSA:3.40.1690.10 217 357 1.2E-50 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal JV59_27780 583d091dbfec69a01f1737dc6158543e 375 SUPERFAMILY SSF160544 244 351 5.36E-35 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal JV59_27780 583d091dbfec69a01f1737dc6158543e 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 6.2E-37 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JV59_27780 583d091dbfec69a01f1737dc6158543e 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 6.2E-37 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JV59_27780 583d091dbfec69a01f1737dc6158543e 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 6.2E-37 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JV59_27780 583d091dbfec69a01f1737dc6158543e 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 6.2E-37 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JV59_27780 583d091dbfec69a01f1737dc6158543e 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 6.2E-37 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JV59_27780 583d091dbfec69a01f1737dc6158543e 375 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 352 9.6E-118 T 14-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 JV59_35910 70aa52253d9774b65609d4def531ef10 329 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 178 327 1.6E-29 T 14-10-2018 IPR000160 GGDEF domain JV59_35910 70aa52253d9774b65609d4def531ef10 329 Pfam PF13185 GAF domain 27 168 1.3E-16 T 14-10-2018 IPR003018 GAF domain GO:0005515 JV59_35910 70aa52253d9774b65609d4def531ef10 329 SUPERFAMILY SSF55073 185 328 4.32E-32 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_35910 70aa52253d9774b65609d4def531ef10 329 SUPERFAMILY SSF55781 12 167 7.63E-27 T 14-10-2018 JV59_35910 70aa52253d9774b65609d4def531ef10 329 Gene3D G3DSA:3.30.450.40 27 175 1.3E-25 T 14-10-2018 IPR029016 GAF-like domain superfamily JV59_35910 70aa52253d9774b65609d4def531ef10 329 Pfam PF00990 Diguanylate cyclase, GGDEF domain 180 328 5.9E-29 T 14-10-2018 IPR000160 GGDEF domain JV59_35910 70aa52253d9774b65609d4def531ef10 329 SMART SM00065 25 177 5.5E-15 T 14-10-2018 IPR003018 GAF domain GO:0005515 JV59_35910 70aa52253d9774b65609d4def531ef10 329 Gene3D G3DSA:3.30.70.270 176 329 3.0E-37 T 14-10-2018 JV59_35910 70aa52253d9774b65609d4def531ef10 329 SMART SM00267 169 329 7.0E-28 T 14-10-2018 IPR000160 GGDEF domain JV59_30225 5f3406b8036694d8af93251b2e4cf152 374 Gene3D G3DSA:2.40.370.10 66 251 1.9E-50 T 14-10-2018 IPR023374 AttH-like domain superfamily JV59_30225 5f3406b8036694d8af93251b2e4cf152 374 SUPERFAMILY SSF159245 55 374 9.68E-95 T 14-10-2018 JV59_30225 5f3406b8036694d8af93251b2e4cf152 374 Pfam PF17186 Lipocalin-like domain 252 374 3.8E-33 T 14-10-2018 JV59_30225 5f3406b8036694d8af93251b2e4cf152 374 Pfam PF07143 CrtC N-terminal lipocalin domain 78 248 3.5E-44 T 14-10-2018 IPR010791 AttH domain JV59_30225 5f3406b8036694d8af93251b2e4cf152 374 Gene3D G3DSA:2.40.370.10 252 374 6.4E-26 T 14-10-2018 IPR023374 AttH-like domain superfamily JV59_38400 e8edee6ee121f75f048e3f1c460d356c 335 Gene3D G3DSA:3.30.540.10 7 319 2.0E-123 T 14-10-2018 JV59_38400 e8edee6ee121f75f048e3f1c460d356c 335 PIRSF PIRSF004532 1 331 1.2E-131 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 JV59_38400 e8edee6ee121f75f048e3f1c460d356c 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 327 1.1E-163 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 JV59_38400 e8edee6ee121f75f048e3f1c460d356c 335 SUPERFAMILY SSF56655 1 324 2.08E-104 T 14-10-2018 JV59_38400 e8edee6ee121f75f048e3f1c460d356c 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 2.4E-126 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 JV59_38400 e8edee6ee121f75f048e3f1c460d356c 335 Gene3D G3DSA:3.40.190.90 109 276 2.0E-123 T 14-10-2018 JV59_22555 b78c7f64259b3440f6bc6ae5defe37d6 243 Gene3D G3DSA:1.10.10.10 7 84 9.0E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_22555 b78c7f64259b3440f6bc6ae5defe37d6 243 Pfam PF07729 FCD domain 93 215 2.0E-21 T 14-10-2018 IPR011711 GntR, C-terminal JV59_22555 b78c7f64259b3440f6bc6ae5defe37d6 243 SMART SM00895 93 216 3.2E-18 T 14-10-2018 IPR011711 GntR, C-terminal JV59_22555 b78c7f64259b3440f6bc6ae5defe37d6 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 83 1.6E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_22555 b78c7f64259b3440f6bc6ae5defe37d6 243 SMART SM00345 25 83 1.6E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_22555 b78c7f64259b3440f6bc6ae5defe37d6 243 SUPERFAMILY SSF46785 18 87 3.58E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_22555 b78c7f64259b3440f6bc6ae5defe37d6 243 SUPERFAMILY SSF48008 89 220 6.02E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JV59_22555 b78c7f64259b3440f6bc6ae5defe37d6 243 Gene3D G3DSA:1.20.120.530 87 226 4.6E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JV59_24760 01e751fb53b1e5468295e231e6a0978e 707 SMART SM00382 494 680 8.4E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_24760 01e751fb53b1e5468295e231e6a0978e 707 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 13 706 0.0 T 14-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 JV59_24760 01e751fb53b1e5468295e231e6a0978e 707 Pfam PF00005 ABC transporter 485 634 1.7E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_24760 01e751fb53b1e5468295e231e6a0978e 707 SUPERFAMILY SSF90123 141 452 1.31E-65 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_24760 01e751fb53b1e5468295e231e6a0978e 707 Gene3D G3DSA:3.40.50.300 460 707 8.9E-91 T 14-10-2018 JV59_24760 01e751fb53b1e5468295e231e6a0978e 707 ProSitePatterns PS00211 ABC transporters family signature. 606 620 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_24760 01e751fb53b1e5468295e231e6a0978e 707 Gene3D G3DSA:1.20.1560.10 139 453 1.7E-72 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_24760 01e751fb53b1e5468295e231e6a0978e 707 Pfam PF03412 Peptidase C39 family 7 128 2.3E-9 T 14-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 JV59_24760 01e751fb53b1e5468295e231e6a0978e 707 Pfam PF00664 ABC transporter transmembrane region 156 422 1.3E-43 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JV59_24760 01e751fb53b1e5468295e231e6a0978e 707 SUPERFAMILY SSF52540 459 704 2.11E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_24760 01e751fb53b1e5468295e231e6a0978e 707 Gene3D G3DSA:3.90.70.10 7 128 1.8E-16 T 14-10-2018 JV59_30500 e023de81273a7ba5cb0120303f2d0a93 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.3E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_30500 e023de81273a7ba5cb0120303f2d0a93 307 SUPERFAMILY SSF46785 5 111 8.46E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_30500 e023de81273a7ba5cb0120303f2d0a93 307 Gene3D G3DSA:3.40.190.10 91 292 2.4E-47 T 14-10-2018 JV59_30500 e023de81273a7ba5cb0120303f2d0a93 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_30500 e023de81273a7ba5cb0120303f2d0a93 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_30500 e023de81273a7ba5cb0120303f2d0a93 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_30500 e023de81273a7ba5cb0120303f2d0a93 307 Pfam PF03466 LysR substrate binding domain 88 294 1.6E-29 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_30500 e023de81273a7ba5cb0120303f2d0a93 307 Gene3D G3DSA:3.40.190.10 163 268 2.4E-47 T 14-10-2018 JV59_30500 e023de81273a7ba5cb0120303f2d0a93 307 Gene3D G3DSA:1.10.10.10 3 85 8.3E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_30500 e023de81273a7ba5cb0120303f2d0a93 307 SUPERFAMILY SSF53850 88 299 2.31E-34 T 14-10-2018 JV59_27960 7ffad70cfc44d0761f06f987b3c6d3a2 686 Gene3D G3DSA:3.40.50.620 9 384 8.0E-162 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_27960 7ffad70cfc44d0761f06f987b3c6d3a2 686 Gene3D G3DSA:1.10.730.10 389 526 5.6E-34 T 14-10-2018 JV59_27960 7ffad70cfc44d0761f06f987b3c6d3a2 686 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 556 685 1.4E-47 T 14-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JV59_27960 7ffad70cfc44d0761f06f987b3c6d3a2 686 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 535 4.0E-201 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JV59_27960 7ffad70cfc44d0761f06f987b3c6d3a2 686 Gene3D G3DSA:2.40.50.140 575 686 1.9E-36 T 14-10-2018 JV59_27960 7ffad70cfc44d0761f06f987b3c6d3a2 686 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_27960 7ffad70cfc44d0761f06f987b3c6d3a2 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 5.5E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JV59_27960 7ffad70cfc44d0761f06f987b3c6d3a2 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 5.5E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JV59_27960 7ffad70cfc44d0761f06f987b3c6d3a2 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 5.5E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JV59_27960 7ffad70cfc44d0761f06f987b3c6d3a2 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 5.5E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JV59_27960 7ffad70cfc44d0761f06f987b3c6d3a2 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 5.5E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JV59_27960 7ffad70cfc44d0761f06f987b3c6d3a2 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 5.5E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JV59_27960 7ffad70cfc44d0761f06f987b3c6d3a2 686 Pfam PF01588 Putative tRNA binding domain 591 683 5.8E-26 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 JV59_27960 7ffad70cfc44d0761f06f987b3c6d3a2 686 Pfam PF09334 tRNA synthetases class I (M) 9 396 6.2E-165 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_27960 7ffad70cfc44d0761f06f987b3c6d3a2 686 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 41.574 T 14-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JV59_27960 7ffad70cfc44d0761f06f987b3c6d3a2 686 SUPERFAMILY SSF52374 4 387 8.19E-102 T 14-10-2018 JV59_27960 7ffad70cfc44d0761f06f987b3c6d3a2 686 SUPERFAMILY SSF47323 389 547 8.9E-45 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_27960 7ffad70cfc44d0761f06f987b3c6d3a2 686 Gene3D G3DSA:2.20.28.20 142 176 8.0E-162 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JV59_27960 7ffad70cfc44d0761f06f987b3c6d3a2 686 SUPERFAMILY SSF57770 142 176 5.62E-13 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JV59_27960 7ffad70cfc44d0761f06f987b3c6d3a2 686 SUPERFAMILY SSF50249 581 685 7.1E-34 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_34820 3237202cf9566d470d3fa3707a05c6a5 199 Pfam PF13662 Toprim domain 82 172 2.2E-23 T 14-10-2018 IPR006171 TOPRIM domain JV59_34820 3237202cf9566d470d3fa3707a05c6a5 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 102.622 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 JV59_34820 3237202cf9566d470d3fa3707a05c6a5 199 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 JV59_34820 3237202cf9566d470d3fa3707a05c6a5 199 Pfam PF02132 RecR protein 41 77 4.7E-15 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger JV59_34820 3237202cf9566d470d3fa3707a05c6a5 199 SMART SM00493 81 166 4.4E-16 T 14-10-2018 IPR006171 TOPRIM domain JV59_34820 3237202cf9566d470d3fa3707a05c6a5 199 Gene3D G3DSA:3.40.1360.10 78 199 5.2E-39 T 14-10-2018 JV59_34820 3237202cf9566d470d3fa3707a05c6a5 199 Gene3D G3DSA:1.10.8.420 1 53 3.5E-19 T 14-10-2018 JV59_34820 3237202cf9566d470d3fa3707a05c6a5 199 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 1.8E-78 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 JV59_34820 3237202cf9566d470d3fa3707a05c6a5 199 SUPERFAMILY SSF111304 2 199 2.88E-72 T 14-10-2018 IPR023627 Recombination protein RecR JV59_31860 eb2d6a689412d54dedcfac20be72c0da 375 Gene3D G3DSA:1.10.230.10 224 322 1.5E-117 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain JV59_31860 eb2d6a689412d54dedcfac20be72c0da 375 ProSitePatterns PS00480 Citrate synthase signature. 258 270 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 JV59_31860 eb2d6a689412d54dedcfac20be72c0da 375 PRINTS PR00143 Citrate synthase signature 176 191 1.2E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 JV59_31860 eb2d6a689412d54dedcfac20be72c0da 375 PRINTS PR00143 Citrate synthase signature 328 342 1.2E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 JV59_31860 eb2d6a689412d54dedcfac20be72c0da 375 PRINTS PR00143 Citrate synthase signature 198 226 1.2E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 JV59_31860 eb2d6a689412d54dedcfac20be72c0da 375 PRINTS PR00143 Citrate synthase signature 125 138 1.2E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 JV59_31860 eb2d6a689412d54dedcfac20be72c0da 375 PRINTS PR00143 Citrate synthase signature 308 324 1.2E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 JV59_31860 eb2d6a689412d54dedcfac20be72c0da 375 PRINTS PR00143 Citrate synthase signature 251 271 1.2E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 JV59_31860 eb2d6a689412d54dedcfac20be72c0da 375 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 10 375 1.2E-161 T 14-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 JV59_31860 eb2d6a689412d54dedcfac20be72c0da 375 Pfam PF00285 Citrate synthase, C-terminal domain 10 357 3.8E-112 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 JV59_31860 eb2d6a689412d54dedcfac20be72c0da 375 PIRSF PIRSF001369 3 375 1.4E-117 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type JV59_31860 eb2d6a689412d54dedcfac20be72c0da 375 Gene3D G3DSA:1.10.580.10 31 355 1.5E-117 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 JV59_31860 eb2d6a689412d54dedcfac20be72c0da 375 SUPERFAMILY SSF48256 9 375 9.94E-124 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 JV59_21545 665658cce5ccd5148bb349d00739b38a 225 Gene3D G3DSA:3.40.50.2300 1 120 2.9E-38 T 14-10-2018 JV59_21545 665658cce5ccd5148bb349d00739b38a 225 Gene3D G3DSA:1.10.10.10 121 225 4.6E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_21545 665658cce5ccd5148bb349d00739b38a 225 SMART SM00862 146 220 7.9E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_21545 665658cce5ccd5148bb349d00739b38a 225 SMART SM00448 3 114 2.0E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_21545 665658cce5ccd5148bb349d00739b38a 225 SUPERFAMILY SSF52172 2 124 5.83E-39 T 14-10-2018 IPR011006 CheY-like superfamily JV59_21545 665658cce5ccd5148bb349d00739b38a 225 SUPERFAMILY SSF46894 125 219 9.64E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_21545 665658cce5ccd5148bb349d00739b38a 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 217 1.7E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_21545 665658cce5ccd5148bb349d00739b38a 225 Pfam PF00072 Response regulator receiver domain 6 114 2.4E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_22650 e1c3cfab35c601cad75c59f21775b5cd 453 Pfam PF01979 Amidohydrolase family 55 419 3.8E-63 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JV59_22650 e1c3cfab35c601cad75c59f21775b5cd 453 SUPERFAMILY SSF51556 58 372 2.5E-93 T 14-10-2018 IPR032466 Metal-dependent hydrolase JV59_22650 e1c3cfab35c601cad75c59f21775b5cd 453 Gene3D G3DSA:2.30.40.10 20 420 8.0E-122 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JV59_22650 e1c3cfab35c601cad75c59f21775b5cd 453 SUPERFAMILY SSF51338 4 446 8.64E-19 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JV59_22650 e1c3cfab35c601cad75c59f21775b5cd 453 Gene3D G3DSA:3.20.20.140 59 373 8.0E-122 T 14-10-2018 JV59_29570 0f4619c5451d69cba4916a00eb048901 404 SUPERFAMILY SSF53901 4 270 1.73E-84 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_29570 0f4619c5451d69cba4916a00eb048901 404 Gene3D G3DSA:3.40.47.10 126 398 2.5E-146 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_29570 0f4619c5451d69cba4916a00eb048901 404 Gene3D G3DSA:3.40.47.10 6 276 2.5E-146 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_29570 0f4619c5451d69cba4916a00eb048901 404 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 JV59_29570 0f4619c5451d69cba4916a00eb048901 404 Pfam PF00108 Thiolase, N-terminal domain 4 262 7.6E-99 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 JV59_29570 0f4619c5451d69cba4916a00eb048901 404 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 JV59_29570 0f4619c5451d69cba4916a00eb048901 404 SUPERFAMILY SSF53901 271 400 1.23E-37 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_29570 0f4619c5451d69cba4916a00eb048901 404 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 JV59_29570 0f4619c5451d69cba4916a00eb048901 404 PIRSF PIRSF000429 1 402 2.3E-128 T 14-10-2018 IPR002155 Thiolase GO:0016747 JV59_29570 0f4619c5451d69cba4916a00eb048901 404 Pfam PF02803 Thiolase, C-terminal domain 270 399 6.5E-44 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 JV59_29570 0f4619c5451d69cba4916a00eb048901 404 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 1.2E-145 T 14-10-2018 IPR002155 Thiolase GO:0016747 JV59_16900 c690b9878d2591069eb58a7511053add 479 SUPERFAMILY SSF55874 310 475 5.37E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_16900 c690b9878d2591069eb58a7511053add 479 SUPERFAMILY SSF47384 239 321 1.9E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_16900 c690b9878d2591069eb58a7511053add 479 SMART SM00387 367 477 1.0E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_16900 c690b9878d2591069eb58a7511053add 479 Gene3D G3DSA:1.10.287.130 207 321 1.7E-19 T 14-10-2018 JV59_16900 c690b9878d2591069eb58a7511053add 479 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 367 475 1.7E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_16900 c690b9878d2591069eb58a7511053add 479 Gene3D G3DSA:3.30.565.10 326 476 2.6E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_16900 c690b9878d2591069eb58a7511053add 479 SMART SM00388 256 321 1.2E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_16900 c690b9878d2591069eb58a7511053add 479 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 321 3.3E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_16900 c690b9878d2591069eb58a7511053add 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 456 2.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_16900 c690b9878d2591069eb58a7511053add 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 432 2.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_16900 c690b9878d2591069eb58a7511053add 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 474 2.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_16900 c690b9878d2591069eb58a7511053add 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 418 2.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_35615 1898423200d3aeb4f75d1e430235460a 883 SUPERFAMILY SSF49384 26 198 1.61E-65 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 JV59_35615 1898423200d3aeb4f75d1e430235460a 883 Gene3D G3DSA:2.60.40.290 25 167 6.0E-55 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 JV59_35615 1898423200d3aeb4f75d1e430235460a 883 SUPERFAMILY SSF51445 332 772 8.0E-144 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_35615 1898423200d3aeb4f75d1e430235460a 883 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 804 879 1.7E-27 T 14-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 JV59_35615 1898423200d3aeb4f75d1e430235460a 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 355 376 3.2E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 JV59_35615 1898423200d3aeb4f75d1e430235460a 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 728 744 3.2E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 JV59_35615 1898423200d3aeb4f75d1e430235460a 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 292 312 3.2E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 JV59_35615 1898423200d3aeb4f75d1e430235460a 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 746 763 3.2E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 JV59_35615 1898423200d3aeb4f75d1e430235460a 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 432 449 3.2E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 JV59_35615 1898423200d3aeb4f75d1e430235460a 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 326 343 3.2E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 JV59_35615 1898423200d3aeb4f75d1e430235460a 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 526 539 3.2E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 JV59_35615 1898423200d3aeb4f75d1e430235460a 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 499 517 3.2E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 JV59_35615 1898423200d3aeb4f75d1e430235460a 883 SUPERFAMILY SSF81296 781 882 5.88E-37 T 14-10-2018 IPR014756 Immunoglobulin E-set JV59_35615 1898423200d3aeb4f75d1e430235460a 883 Gene3D G3DSA:3.30.379.10 204 329 4.0E-24 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 JV59_35615 1898423200d3aeb4f75d1e430235460a 883 Gene3D G3DSA:3.20.20.80 330 817 3.1E-165 T 14-10-2018 JV59_35615 1898423200d3aeb4f75d1e430235460a 883 Pfam PF03173 Putative carbohydrate binding domain 35 193 8.0E-62 T 14-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 JV59_35615 1898423200d3aeb4f75d1e430235460a 883 SUPERFAMILY SSF55545 208 331 9.27E-24 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 JV59_35615 1898423200d3aeb4f75d1e430235460a 883 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 211 329 2.6E-13 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal JV59_35615 1898423200d3aeb4f75d1e430235460a 883 Gene3D G3DSA:2.60.40.10 818 882 1.3E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_35615 1898423200d3aeb4f75d1e430235460a 883 SMART SM01081 34 195 4.2E-93 T 14-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 JV59_35615 1898423200d3aeb4f75d1e430235460a 883 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 332 764 7.8E-109 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 JV59_01965 0a8ca1c3040ee14b7922cd0cde37542d 197 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 5 40 1.6E-14 T 14-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 JV59_01965 0a8ca1c3040ee14b7922cd0cde37542d 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 9.3E-8 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 JV59_01965 0a8ca1c3040ee14b7922cd0cde37542d 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 9.3E-8 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 JV59_01965 0a8ca1c3040ee14b7922cd0cde37542d 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 9.3E-8 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 JV59_01965 0a8ca1c3040ee14b7922cd0cde37542d 197 Pfam PF00355 Rieske [2Fe-2S] domain 56 174 5.9E-12 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JV59_01965 0a8ca1c3040ee14b7922cd0cde37542d 197 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 5.8E-74 T 14-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 JV59_01965 0a8ca1c3040ee14b7922cd0cde37542d 197 SUPERFAMILY SSF50022 30 193 3.34E-45 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JV59_01965 0a8ca1c3040ee14b7922cd0cde37542d 197 Gene3D G3DSA:2.102.10.10 43 190 4.7E-47 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JV59_01965 0a8ca1c3040ee14b7922cd0cde37542d 197 Gene3D G3DSA:1.20.5.510 1 40 1.5E-5 T 14-10-2018 JV59_28315 99d016bec8dcbe908e2c26600873d041 192 Gene3D G3DSA:3.30.60.20 144 189 1.4E-7 T 14-10-2018 JV59_28315 99d016bec8dcbe908e2c26600873d041 192 Pfam PF00265 Thymidine kinase 2 186 3.9E-59 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 JV59_28315 99d016bec8dcbe908e2c26600873d041 192 Gene3D G3DSA:3.40.50.300 2 140 2.5E-24 T 14-10-2018 JV59_28315 99d016bec8dcbe908e2c26600873d041 192 PIRSF PIRSF035805 1 192 6.5E-57 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 JV59_28315 99d016bec8dcbe908e2c26600873d041 192 SUPERFAMILY SSF57716 142 190 9.5E-17 T 14-10-2018 JV59_28315 99d016bec8dcbe908e2c26600873d041 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 14-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 JV59_28315 99d016bec8dcbe908e2c26600873d041 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.835 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 JV59_28315 99d016bec8dcbe908e2c26600873d041 192 SUPERFAMILY SSF52540 2 141 4.96E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_20990 f6406ac3cf8fc186659b92a78913c3c2 159 Gene3D G3DSA:1.10.10.10 1 157 3.3E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_20990 f6406ac3cf8fc186659b92a78913c3c2 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 84 6.2E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_20990 f6406ac3cf8fc186659b92a78913c3c2 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 100 6.2E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_20990 f6406ac3cf8fc186659b92a78913c3c2 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 104 120 6.2E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_20990 f6406ac3cf8fc186659b92a78913c3c2 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 134 154 6.2E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_20990 f6406ac3cf8fc186659b92a78913c3c2 159 SMART SM00347 43 144 1.6E-20 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_20990 f6406ac3cf8fc186659b92a78913c3c2 159 Pfam PF01047 MarR family 50 108 2.0E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_20990 f6406ac3cf8fc186659b92a78913c3c2 159 ProSitePatterns PS01117 MarR-type HTH domain signature. 83 117 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site JV59_20990 f6406ac3cf8fc186659b92a78913c3c2 159 SUPERFAMILY SSF46785 17 155 5.54E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_37270 34ab5a76ccd5c72a204f2ee194e75d0a 348 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 1.9E-169 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JV59_37270 34ab5a76ccd5c72a204f2ee194e75d0a 348 ProSitePatterns PS00321 recA signature. 213 221 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 JV59_37270 34ab5a76ccd5c72a204f2ee194e75d0a 348 SUPERFAMILY SSF52540 3 266 3.8E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_37270 34ab5a76ccd5c72a204f2ee194e75d0a 348 PRINTS PR00142 RecA protein signature 210 238 1.1E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JV59_37270 34ab5a76ccd5c72a204f2ee194e75d0a 348 PRINTS PR00142 RecA protein signature 297 314 1.1E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JV59_37270 34ab5a76ccd5c72a204f2ee194e75d0a 348 PRINTS PR00142 RecA protein signature 93 122 1.1E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JV59_37270 34ab5a76ccd5c72a204f2ee194e75d0a 348 PRINTS PR00142 RecA protein signature 127 156 1.1E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JV59_37270 34ab5a76ccd5c72a204f2ee194e75d0a 348 PRINTS PR00142 RecA protein signature 243 272 1.1E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JV59_37270 34ab5a76ccd5c72a204f2ee194e75d0a 348 PRINTS PR00142 RecA protein signature 165 194 1.1E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JV59_37270 34ab5a76ccd5c72a204f2ee194e75d0a 348 Hamap MF_00268 Protein RecA [recA]. 5 329 50.417 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JV59_37270 34ab5a76ccd5c72a204f2ee194e75d0a 348 Gene3D G3DSA:3.30.250.10 268 326 8.6E-25 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal JV59_37270 34ab5a76ccd5c72a204f2ee194e75d0a 348 Pfam PF00154 recA bacterial DNA recombination protein 7 267 1.6E-142 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JV59_37270 34ab5a76ccd5c72a204f2ee194e75d0a 348 SMART SM00382 57 228 1.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_37270 34ab5a76ccd5c72a204f2ee194e75d0a 348 SUPERFAMILY SSF54752 269 324 1.44E-20 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal JV59_37270 34ab5a76ccd5c72a204f2ee194e75d0a 348 Gene3D G3DSA:3.40.50.300 26 267 1.8E-82 T 14-10-2018 JV59_22625 6499baa97c4e6e097a3d7fdb6d545f31 171 Gene3D G3DSA:1.10.3330.10 11 171 7.7E-60 T 14-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 JV59_22625 6499baa97c4e6e097a3d7fdb6d545f31 171 Pfam PF09349 OHCU decarboxylase 11 169 4.1E-42 T 14-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 JV59_22625 6499baa97c4e6e097a3d7fdb6d545f31 171 SUPERFAMILY SSF158694 11 171 2.22E-49 T 14-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 JV59_22625 6499baa97c4e6e097a3d7fdb6d545f31 171 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 12 171 1.3E-68 T 14-10-2018 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 JV59_35155 cf943342ff5ef2ae2f6d31a74b55ab86 176 Pfam PF01713 Smr domain 97 171 1.5E-17 T 14-10-2018 IPR002625 Smr domain JV59_35155 cf943342ff5ef2ae2f6d31a74b55ab86 176 SMART SM00463 94 172 2.9E-18 T 14-10-2018 IPR002625 Smr domain JV59_35155 cf943342ff5ef2ae2f6d31a74b55ab86 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 173 39.417 T 14-10-2018 IPR022990 Uncharacterised protein family UPF0115 JV59_35155 cf943342ff5ef2ae2f6d31a74b55ab86 176 Gene3D G3DSA:3.30.1370.110 49 175 1.5E-27 T 14-10-2018 JV59_35155 cf943342ff5ef2ae2f6d31a74b55ab86 176 SUPERFAMILY SSF160443 95 171 1.57E-11 T 14-10-2018 IPR036063 Smr domain superfamily JV59_36065 b24c66180410d9e3b0b8649c4457042a 548 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 315 467 6.3E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_36065 b24c66180410d9e3b0b8649c4457042a 548 Gene3D G3DSA:1.10.3720.10 277 541 1.0E-30 T 14-10-2018 IPR035906 MetI-like superfamily JV59_36065 b24c66180410d9e3b0b8649c4457042a 548 SUPERFAMILY SSF161098 259 529 1.01E-35 T 14-10-2018 IPR035906 MetI-like superfamily JV59_36065 b24c66180410d9e3b0b8649c4457042a 548 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 278 539 1.9E-75 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 JV59_22040 50d0e200dde42e7cabf3c6cbbd1b6067 186 SUPERFAMILY SSF143081 2 173 3.01E-39 T 14-10-2018 IPR036590 SOS response associated peptidase-like JV59_22040 50d0e200dde42e7cabf3c6cbbd1b6067 186 Pfam PF02586 SOS response associated peptidase (SRAP) 1 172 2.3E-29 T 14-10-2018 IPR003738 SOS response associated peptidase (SRAP) JV59_22040 50d0e200dde42e7cabf3c6cbbd1b6067 186 Gene3D G3DSA:3.90.1680.10 1 182 1.1E-37 T 14-10-2018 IPR036590 SOS response associated peptidase-like JV59_21485 2b50a3f579608d8d19467a1d7420af86 615 Gene3D G3DSA:1.10.1370.30 26 306 1.6E-10 T 14-10-2018 JV59_21485 2b50a3f579608d8d19467a1d7420af86 615 Gene3D G3DSA:1.10.1370.20 321 499 1.6E-10 T 14-10-2018 JV59_21485 2b50a3f579608d8d19467a1d7420af86 615 Pfam PF01432 Peptidase family M3 283 549 2.4E-18 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 JV59_21485 2b50a3f579608d8d19467a1d7420af86 615 SUPERFAMILY SSF55486 3 552 1.03E-74 T 14-10-2018 JV59_23075 30207257509b62d9bc919bf61a534ed7 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 242 1.8E-56 T 14-10-2018 JV59_23075 30207257509b62d9bc919bf61a534ed7 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 3.8E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_23075 30207257509b62d9bc919bf61a534ed7 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.8E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_23075 30207257509b62d9bc919bf61a534ed7 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.8E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_23075 30207257509b62d9bc919bf61a534ed7 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 3.8E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_23075 30207257509b62d9bc919bf61a534ed7 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.8E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_23075 30207257509b62d9bc919bf61a534ed7 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.8E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_23075 30207257509b62d9bc919bf61a534ed7 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 174 0.0023 T 14-10-2018 JV59_23075 30207257509b62d9bc919bf61a534ed7 243 Gene3D G3DSA:3.40.50.720 1 243 5.1E-76 T 14-10-2018 JV59_23075 30207257509b62d9bc919bf61a534ed7 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JV59_23075 30207257509b62d9bc919bf61a534ed7 243 SUPERFAMILY SSF51735 2 242 1.45E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_23075 30207257509b62d9bc919bf61a534ed7 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 9.0E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_23075 30207257509b62d9bc919bf61a534ed7 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 9.0E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_23075 30207257509b62d9bc919bf61a534ed7 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 9.0E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 Gene3D G3DSA:3.30.70.240 609 680 1.0E-91 T 14-10-2018 JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 SUPERFAMILY SSF54980 608 695 4.6E-30 T 14-10-2018 IPR035647 EF-G domain III/V-like JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 SMART SM00838 605 693 9.8E-58 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 Gene3D G3DSA:3.30.70.870 410 485 3.0E-31 T 14-10-2018 JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 SUPERFAMILY SSF50447 271 409 2.65E-35 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 112.208 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 Pfam PF03764 Elongation factor G, domain IV 484 603 1.4E-47 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 Pfam PF03144 Elongation factor Tu domain 2 329 396 6.3E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 SUPERFAMILY SSF52540 6 288 1.12E-106 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 2.6E-66 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 SUPERFAMILY SSF54980 407 485 2.63E-24 T 14-10-2018 IPR035647 EF-G domain III/V-like JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 Pfam PF00679 Elongation factor G C-terminus 605 692 6.9E-31 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 SUPERFAMILY SSF54211 484 604 2.53E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 Pfam PF14492 Elongation Factor G, domain II 409 483 2.3E-32 T 14-10-2018 JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 1.2E-34 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 Gene3D G3DSA:3.40.50.300 1 298 1.4E-115 T 14-10-2018 JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 Gene3D G3DSA:2.40.30.10 299 405 2.2E-47 T 14-10-2018 JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 Gene3D G3DSA:3.30.230.10 489 693 1.0E-91 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 SMART SM00889 485 603 1.8E-74 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.7E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 PRINTS PR00315 GTP-binding elongation factor signature 101 112 2.7E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 PRINTS PR00315 GTP-binding elongation factor signature 85 95 2.7E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 PRINTS PR00315 GTP-binding elongation factor signature 137 146 2.7E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_00450 b5d1874cceaaba85ec5e0c02c157c370 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 2.7E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_27785 38c7c815fff15c928a160fcb088f9b95 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 3.7E-24 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 JV59_27785 38c7c815fff15c928a160fcb088f9b95 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 3.7E-24 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 JV59_27785 38c7c815fff15c928a160fcb088f9b95 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 179 201 3.7E-24 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 JV59_27785 38c7c815fff15c928a160fcb088f9b95 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 201 220 3.7E-24 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 JV59_27785 38c7c815fff15c928a160fcb088f9b95 258 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 15 254 5.4E-59 T 14-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 JV59_27785 38c7c815fff15c928a160fcb088f9b95 258 Pfam PF01311 Bacterial export proteins, family 1 14 243 1.2E-61 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 JV59_24385 064da2e30898634bea6f6fa1c36387e3 123 SUPERFAMILY SSF55331 2 114 1.07E-24 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily JV59_24385 064da2e30898634bea6f6fa1c36387e3 123 Gene3D G3DSA:3.30.429.10 1 123 4.9E-26 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily JV59_35175 0b3d2cb9d8c5cb89afa137af9543b426 291 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 218 233 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_35175 0b3d2cb9d8c5cb89afa137af9543b426 291 Pfam PF00813 FliP family 94 285 1.3E-78 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_35175 0b3d2cb9d8c5cb89afa137af9543b426 291 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 150 162 5.5E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JV59_35175 0b3d2cb9d8c5cb89afa137af9543b426 291 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 190 202 5.5E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JV59_35175 0b3d2cb9d8c5cb89afa137af9543b426 291 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 162 176 5.5E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JV59_35175 0b3d2cb9d8c5cb89afa137af9543b426 291 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 279 289 5.5E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JV59_35175 0b3d2cb9d8c5cb89afa137af9543b426 291 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 90 99 5.5E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JV59_35175 0b3d2cb9d8c5cb89afa137af9543b426 291 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 211 223 5.5E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JV59_35175 0b3d2cb9d8c5cb89afa137af9543b426 291 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 263 288 1.3E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_35175 0b3d2cb9d8c5cb89afa137af9543b426 291 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 131 150 1.3E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_35175 0b3d2cb9d8c5cb89afa137af9543b426 291 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 218 238 1.3E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_35175 0b3d2cb9d8c5cb89afa137af9543b426 291 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 239 260 1.3E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_35175 0b3d2cb9d8c5cb89afa137af9543b426 291 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 111 131 1.3E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_35175 0b3d2cb9d8c5cb89afa137af9543b426 291 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 92 111 1.3E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_35175 0b3d2cb9d8c5cb89afa137af9543b426 291 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 266 278 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_35175 0b3d2cb9d8c5cb89afa137af9543b426 291 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 94 289 6.5E-81 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JV59_19905 24426a3a3bdfa3af73276cf079f2ffc8 438 SUPERFAMILY SSF55073 295 436 2.35E-34 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_19905 24426a3a3bdfa3af73276cf079f2ffc8 438 Gene3D G3DSA:3.30.70.270 276 436 3.2E-41 T 14-10-2018 JV59_19905 24426a3a3bdfa3af73276cf079f2ffc8 438 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 286 436 7.1E-39 T 14-10-2018 IPR000160 GGDEF domain JV59_19905 24426a3a3bdfa3af73276cf079f2ffc8 438 SMART SM00267 279 438 3.0E-38 T 14-10-2018 IPR000160 GGDEF domain JV59_19905 24426a3a3bdfa3af73276cf079f2ffc8 438 Pfam PF00990 Diguanylate cyclase, GGDEF domain 291 433 1.2E-31 T 14-10-2018 IPR000160 GGDEF domain JV59_27870 3b18d529fb70fa162fe60189bc756eeb 464 SMART SM00448 11 122 1.6E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_27870 3b18d529fb70fa162fe60189bc756eeb 464 Pfam PF00072 Response regulator receiver domain 14 122 4.1E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_27870 3b18d529fb70fa162fe60189bc756eeb 464 Gene3D G3DSA:3.40.50.300 138 318 1.1E-64 T 14-10-2018 JV59_27870 3b18d529fb70fa162fe60189bc756eeb 464 Gene3D G3DSA:1.10.8.60 319 399 6.9E-22 T 14-10-2018 JV59_27870 3b18d529fb70fa162fe60189bc756eeb 464 Gene3D G3DSA:3.40.50.2300 1 137 7.0E-34 T 14-10-2018 JV59_27870 3b18d529fb70fa162fe60189bc756eeb 464 SMART SM00382 167 310 4.7E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_27870 3b18d529fb70fa162fe60189bc756eeb 464 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site JV59_27870 3b18d529fb70fa162fe60189bc756eeb 464 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JV59_27870 3b18d529fb70fa162fe60189bc756eeb 464 Pfam PF00158 Sigma-54 interaction domain 148 313 1.3E-68 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JV59_27870 3b18d529fb70fa162fe60189bc756eeb 464 SUPERFAMILY SSF52540 147 390 1.33E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_27870 3b18d529fb70fa162fe60189bc756eeb 464 SUPERFAMILY SSF46689 360 457 2.51E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_27870 3b18d529fb70fa162fe60189bc756eeb 464 Pfam PF02954 Bacterial regulatory protein, Fis family 418 456 2.3E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_27870 3b18d529fb70fa162fe60189bc756eeb 464 Gene3D G3DSA:1.10.10.60 418 459 1.5E-9 T 14-10-2018 JV59_27870 3b18d529fb70fa162fe60189bc756eeb 464 SUPERFAMILY SSF52172 12 191 1.2E-41 T 14-10-2018 IPR011006 CheY-like superfamily JV59_38820 e3a2a85ae779a528450868de0d65c412 265 SUPERFAMILY SSF53474 12 261 3.05E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_38820 e3a2a85ae779a528450868de0d65c412 265 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 20 261 9.5E-105 T 14-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 JV59_38820 e3a2a85ae779a528450868de0d65c412 265 Gene3D G3DSA:3.40.50.1820 12 263 5.7E-66 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_38820 e3a2a85ae779a528450868de0d65c412 265 Pfam PF00561 alpha/beta hydrolase fold 25 250 9.7E-24 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_38820 e3a2a85ae779a528450868de0d65c412 265 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 14 263 44.975 T 14-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 JV59_19000 2b9dc1e2678796302883519250e400d5 122 Pfam PF04076 Bacterial OB fold (BOF) protein 41 120 5.0E-12 T 14-10-2018 IPR005220 Bacterial OB-fold JV59_19000 2b9dc1e2678796302883519250e400d5 122 Gene3D G3DSA:2.40.50.200 19 122 1.9E-17 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily JV59_19000 2b9dc1e2678796302883519250e400d5 122 SUPERFAMILY SSF101756 21 122 1.83E-22 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily JV59_27670 cff33b2ba18a330546be189656d515af 226 Gene3D G3DSA:2.60.40.4070 110 189 2.2E-16 T 14-10-2018 JV59_27670 cff33b2ba18a330546be189656d515af 226 Gene3D G3DSA:2.30.30.910 99 221 2.2E-16 T 14-10-2018 JV59_27670 cff33b2ba18a330546be189656d515af 226 Pfam PF13860 FlgD Ig-like domain 111 181 1.7E-9 T 14-10-2018 IPR025965 FlgD Ig-like domain JV59_27670 cff33b2ba18a330546be189656d515af 226 Pfam PF03963 Flagellar hook capping protein - N-terminal region 20 84 2.3E-18 T 14-10-2018 IPR005648 Flagellar hook capping protein JV59_27670 cff33b2ba18a330546be189656d515af 226 Pfam PF13861 FlgD Tudor-like domain 93 222 8.4E-11 T 14-10-2018 IPR025963 FlgD Tudor-like domain JV59_00755 cdda365160a15e7f8b464bebc3feff38 186 Gene3D G3DSA:3.90.950.10 1 186 1.9E-70 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like JV59_00755 cdda365160a15e7f8b464bebc3feff38 186 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 182 1.4E-57 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 JV59_00755 cdda365160a15e7f8b464bebc3feff38 186 Hamap MF_00528 Septum formation protein Maf [maf]. 4 186 29.6 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 JV59_00755 cdda365160a15e7f8b464bebc3feff38 186 PIRSF PIRSF006305 1 186 1.2E-57 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 JV59_00755 cdda365160a15e7f8b464bebc3feff38 186 SUPERFAMILY SSF52972 1 184 1.31E-63 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like JV59_00755 cdda365160a15e7f8b464bebc3feff38 186 Pfam PF02545 Maf-like protein 4 184 2.4E-61 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 JV59_17990 445c26496c845c10ec5917d6361108cc 371 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 6 362 1.8E-169 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 JV59_17990 445c26496c845c10ec5917d6361108cc 371 Gene3D G3DSA:3.40.640.10 16 262 2.9E-124 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_17990 445c26496c845c10ec5917d6361108cc 371 PIRSF PIRSF000524 1 369 2.0E-59 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 JV59_17990 445c26496c845c10ec5917d6361108cc 371 Pfam PF00266 Aminotransferase class-V 36 308 1.1E-30 T 14-10-2018 IPR000192 Aminotransferase class V domain JV59_17990 445c26496c845c10ec5917d6361108cc 371 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 2 365 2.6E-198 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 JV59_17990 445c26496c845c10ec5917d6361108cc 371 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 371 212.128 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 JV59_17990 445c26496c845c10ec5917d6361108cc 371 Gene3D G3DSA:3.90.1150.10 8 353 2.9E-124 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_17990 445c26496c845c10ec5917d6361108cc 371 SUPERFAMILY SSF53383 3 362 7.85E-89 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_16045 4e1737158c5dd0d3bc3ade92899fee44 251 SUPERFAMILY SSF56281 40 243 5.53E-10 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JV59_39605 656310d400b1501dff5d089fd126eb29 544 SUPERFAMILY SSF56112 94 436 4.2E-46 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily JV59_39605 656310d400b1501dff5d089fd126eb29 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 446 4.2E-177 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 JV59_39605 656310d400b1501dff5d089fd126eb29 544 Pfam PF03109 ABC1 family 113 230 9.4E-36 T 14-10-2018 IPR004147 UbiB domain JV59_39605 656310d400b1501dff5d089fd126eb29 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 56.616 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 JV59_21495 8bf3c640fddbfc0dec1422c7fcb5d39b 343 Pfam PF00175 Oxidoreductase NAD-binding domain 122 224 1.4E-12 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 JV59_21495 8bf3c640fddbfc0dec1422c7fcb5d39b 343 Gene3D G3DSA:3.40.50.80 114 249 5.2E-31 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JV59_21495 8bf3c640fddbfc0dec1422c7fcb5d39b 343 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 270 333 9.4E-13 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JV59_21495 8bf3c640fddbfc0dec1422c7fcb5d39b 343 SUPERFAMILY SSF63380 11 109 4.38E-24 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JV59_21495 8bf3c640fddbfc0dec1422c7fcb5d39b 343 Gene3D G3DSA:2.40.30.10 5 110 4.4E-23 T 14-10-2018 JV59_21495 8bf3c640fddbfc0dec1422c7fcb5d39b 343 Gene3D G3DSA:3.10.20.30 257 343 2.4E-21 T 14-10-2018 IPR012675 Beta-grasp domain superfamily JV59_21495 8bf3c640fddbfc0dec1422c7fcb5d39b 343 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 292 300 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 JV59_21495 8bf3c640fddbfc0dec1422c7fcb5d39b 343 SUPERFAMILY SSF52343 115 245 7.6E-33 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JV59_21495 8bf3c640fddbfc0dec1422c7fcb5d39b 343 SUPERFAMILY SSF54292 235 342 1.44E-24 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JV59_21495 8bf3c640fddbfc0dec1422c7fcb5d39b 343 Pfam PF00970 Oxidoreductase FAD-binding domain 17 109 1.1E-10 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 JV59_35975 ea4d270b3e94325b36e350d1e432629b 445 SUPERFAMILY SSF55729 300 423 7.38E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_35975 ea4d270b3e94325b36e350d1e432629b 445 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 444 7.4E-207 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 JV59_35975 ea4d270b3e94325b36e350d1e432629b 445 Pfam PF00583 Acetyltransferase (GNAT) family 332 416 2.1E-7 T 14-10-2018 IPR000182 GNAT domain JV59_35975 ea4d270b3e94325b36e350d1e432629b 445 Pfam PF00696 Amino acid kinase family 25 270 3.1E-28 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 JV59_35975 ea4d270b3e94325b36e350d1e432629b 445 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 445 223.061 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 JV59_35975 ea4d270b3e94325b36e350d1e432629b 445 PIRSF PIRSF000423 1 445 1.5E-203 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 JV59_35975 ea4d270b3e94325b36e350d1e432629b 445 Gene3D G3DSA:3.40.630.30 297 445 1.1E-37 T 14-10-2018 JV59_35975 ea4d270b3e94325b36e350d1e432629b 445 SUPERFAMILY SSF53633 5 295 9.56E-70 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JV59_35975 ea4d270b3e94325b36e350d1e432629b 445 Gene3D G3DSA:3.40.1160.10 7 296 4.6E-88 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JV59_28360 385499278734eda31f2869ccb6973bd8 485 Pfam PF08323 Starch synthase catalytic domain 8 238 9.5E-67 T 14-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 JV59_28360 385499278734eda31f2869ccb6973bd8 485 Hamap MF_00484 Glycogen synthase [glgA]. 6 483 39.789 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 JV59_28360 385499278734eda31f2869ccb6973bd8 485 Gene3D G3DSA:3.40.50.2000 8 481 3.3E-158 T 14-10-2018 JV59_28360 385499278734eda31f2869ccb6973bd8 485 Gene3D G3DSA:3.40.50.2000 256 467 3.3E-158 T 14-10-2018 JV59_28360 385499278734eda31f2869ccb6973bd8 485 Pfam PF00534 Glycosyl transferases group 1 297 442 2.7E-15 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 JV59_28360 385499278734eda31f2869ccb6973bd8 485 SUPERFAMILY SSF53756 5 485 1.01E-109 T 14-10-2018 JV59_28360 385499278734eda31f2869ccb6973bd8 485 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 7 482 1.1E-164 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 JV59_34665 a2924a7d454dc85fe4e380519e7ee7bb 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_34665 a2924a7d454dc85fe4e380519e7ee7bb 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_34665 a2924a7d454dc85fe4e380519e7ee7bb 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_34665 a2924a7d454dc85fe4e380519e7ee7bb 324 Pfam PF03466 LysR substrate binding domain 91 292 2.1E-38 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_34665 a2924a7d454dc85fe4e380519e7ee7bb 324 Gene3D G3DSA:3.40.190.10 93 303 4.3E-97 T 14-10-2018 JV59_34665 a2924a7d454dc85fe4e380519e7ee7bb 324 Gene3D G3DSA:1.10.10.10 1 86 3.7E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_34665 a2924a7d454dc85fe4e380519e7ee7bb 324 SUPERFAMILY SSF53850 91 322 6.52E-41 T 14-10-2018 JV59_34665 a2924a7d454dc85fe4e380519e7ee7bb 324 Gene3D G3DSA:3.40.190.10 167 267 4.3E-97 T 14-10-2018 JV59_34665 a2924a7d454dc85fe4e380519e7ee7bb 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 8.1E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_34665 a2924a7d454dc85fe4e380519e7ee7bb 324 SUPERFAMILY SSF46785 1 113 5.9E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_30060 9d31a17485f5172db23861b1b0abee17 281 Pfam PF17124 ThiJ/PfpI family-like 43 186 2.0E-12 T 14-10-2018 IPR032633 ThiJ/PfpI family-like JV59_30060 9d31a17485f5172db23861b1b0abee17 281 Gene3D G3DSA:3.40.50.880 9 281 1.4E-71 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_30060 9d31a17485f5172db23861b1b0abee17 281 SUPERFAMILY SSF52317 21 279 1.39E-50 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_29410 16307a44d5543b2be9c9012e9bb2effe 277 SUPERFAMILY SSF53697 108 274 9.1E-28 T 14-10-2018 JV59_29410 16307a44d5543b2be9c9012e9bb2effe 277 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 75 3.2E-12 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 JV59_29410 16307a44d5543b2be9c9012e9bb2effe 277 Gene3D G3DSA:1.10.10.10 6 83 4.0E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_29410 16307a44d5543b2be9c9012e9bb2effe 277 Gene3D G3DSA:3.40.50.10490 108 277 1.8E-33 T 14-10-2018 JV59_29410 16307a44d5543b2be9c9012e9bb2effe 277 Pfam PF01380 SIS domain 141 270 1.8E-23 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 JV59_29410 16307a44d5543b2be9c9012e9bb2effe 277 SUPERFAMILY SSF46689 9 86 8.96E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_17475 2c4000c908cb62d64b544add9375af1e 882 Pfam PF00072 Response regulator receiver domain 760 873 7.7E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_17475 2c4000c908cb62d64b544add9375af1e 882 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 500 612 7.5E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_17475 2c4000c908cb62d64b544add9375af1e 882 SUPERFAMILY SSF55874 441 612 1.23E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_17475 2c4000c908cb62d64b544add9375af1e 882 SMART SM00387 499 614 1.4E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_17475 2c4000c908cb62d64b544add9375af1e 882 Gene3D G3DSA:1.10.287.130 354 450 9.8E-28 T 14-10-2018 JV59_17475 2c4000c908cb62d64b544add9375af1e 882 SUPERFAMILY SSF47384 373 453 1.12E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_17475 2c4000c908cb62d64b544add9375af1e 882 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 553 1.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_17475 2c4000c908cb62d64b544add9375af1e 882 PRINTS PR00344 Bacterial sensor protein C-terminal signature 574 592 1.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_17475 2c4000c908cb62d64b544add9375af1e 882 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 567 1.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_17475 2c4000c908cb62d64b544add9375af1e 882 PRINTS PR00344 Bacterial sensor protein C-terminal signature 598 611 1.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_17475 2c4000c908cb62d64b544add9375af1e 882 SMART SM00448 758 875 9.3E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_17475 2c4000c908cb62d64b544add9375af1e 882 Gene3D G3DSA:3.30.565.10 451 616 1.0E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_17475 2c4000c908cb62d64b544add9375af1e 882 SMART SM00388 387 452 4.0E-23 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_17475 2c4000c908cb62d64b544add9375af1e 882 Pfam PF00512 His Kinase A (phospho-acceptor) domain 388 452 1.0E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_17475 2c4000c908cb62d64b544add9375af1e 882 SUPERFAMILY SSF52172 758 878 1.99E-34 T 14-10-2018 IPR011006 CheY-like superfamily JV59_17475 2c4000c908cb62d64b544add9375af1e 882 Gene3D G3DSA:3.40.50.2300 740 879 3.4E-39 T 14-10-2018 JV59_22575 a767273575bf564855e447da37c02cb6 445 SUPERFAMILY SSF51556 73 375 1.52E-101 T 14-10-2018 IPR032466 Metal-dependent hydrolase JV59_22575 a767273575bf564855e447da37c02cb6 445 SUPERFAMILY SSF51338 29 89 2.29E-8 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JV59_22575 a767273575bf564855e447da37c02cb6 445 Gene3D G3DSA:3.20.20.140 73 390 3.4E-193 T 14-10-2018 JV59_22575 a767273575bf564855e447da37c02cb6 445 Pfam PF01979 Amidohydrolase family 70 429 1.5E-70 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JV59_22575 a767273575bf564855e447da37c02cb6 445 Gene3D G3DSA:2.30.40.10 9 426 3.4E-193 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JV59_22575 a767273575bf564855e447da37c02cb6 445 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 28 428 2.5E-195 T 14-10-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 JV59_18070 d062d03e6d4f0b9aae26126f074edeca 310 SUPERFAMILY SSF64182 4 307 1.09E-11 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily JV59_18070 d062d03e6d4f0b9aae26126f074edeca 310 PIRSF PIRSF028235 1 310 8.0E-191 T 14-10-2018 IPR016877 Uncharacterised conserved protein UCP028235 JV59_18070 d062d03e6d4f0b9aae26126f074edeca 310 Gene3D G3DSA:3.10.310.30 259 307 4.0E-5 T 14-10-2018 JV59_40030 89fc442a4acaddcd0d31275eab6f9e19 275 ProSitePatterns PS01229 Hypothetical cof family signature 2. 222 244 - T 14-10-2018 JV59_40030 89fc442a4acaddcd0d31275eab6f9e19 275 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 12 270 6.2E-59 T 14-10-2018 IPR000150 Cof family GO:0016787 JV59_40030 89fc442a4acaddcd0d31275eab6f9e19 275 Pfam PF08282 haloacid dehalogenase-like hydrolase 13 270 6.0E-64 T 14-10-2018 JV59_40030 89fc442a4acaddcd0d31275eab6f9e19 275 Gene3D G3DSA:3.30.1240.10 90 197 7.0E-72 T 14-10-2018 JV59_40030 89fc442a4acaddcd0d31275eab6f9e19 275 Gene3D G3DSA:3.40.50.1000 13 266 7.0E-72 T 14-10-2018 IPR023214 HAD superfamily JV59_40030 89fc442a4acaddcd0d31275eab6f9e19 275 ProSitePatterns PS01228 Hypothetical cof family signature 1. 12 23 - T 14-10-2018 JV59_40030 89fc442a4acaddcd0d31275eab6f9e19 275 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 12 241 6.1E-30 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 JV59_40030 89fc442a4acaddcd0d31275eab6f9e19 275 SUPERFAMILY SSF56784 8 274 3.34E-66 T 14-10-2018 IPR036412 HAD-like superfamily JV59_33990 63efe2c6590167e6669ba25d9c9d34b0 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 69 4.8E-15 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain JV59_33990 63efe2c6590167e6669ba25d9c9d34b0 300 Gene3D G3DSA:1.10.3720.10 96 296 4.8E-20 T 14-10-2018 IPR035906 MetI-like superfamily JV59_33990 63efe2c6590167e6669ba25d9c9d34b0 300 SUPERFAMILY SSF161098 97 281 7.33E-27 T 14-10-2018 IPR035906 MetI-like superfamily JV59_33990 63efe2c6590167e6669ba25d9c9d34b0 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 298 1.0E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_37490 de18c4fbd940a0a7bf7b4022cefc98a5 486 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 464 471 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 JV59_37490 de18c4fbd940a0a7bf7b4022cefc98a5 486 PRINTS PR00045 Sigma-54 factor signature 459 477 1.2E-30 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 JV59_37490 de18c4fbd940a0a7bf7b4022cefc98a5 486 PRINTS PR00045 Sigma-54 factor signature 385 397 1.2E-30 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 JV59_37490 de18c4fbd940a0a7bf7b4022cefc98a5 486 PRINTS PR00045 Sigma-54 factor signature 401 412 1.2E-30 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 JV59_37490 de18c4fbd940a0a7bf7b4022cefc98a5 486 PRINTS PR00045 Sigma-54 factor signature 197 214 1.2E-30 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 JV59_37490 de18c4fbd940a0a7bf7b4022cefc98a5 486 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 483 8.3E-155 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 JV59_37490 de18c4fbd940a0a7bf7b4022cefc98a5 486 Pfam PF04963 Sigma-54 factor, core binding domain 125 314 7.8E-59 T 14-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 JV59_37490 de18c4fbd940a0a7bf7b4022cefc98a5 486 Gene3D G3DSA:1.10.10.60 426 483 2.1E-23 T 14-10-2018 JV59_37490 de18c4fbd940a0a7bf7b4022cefc98a5 486 Pfam PF04552 Sigma-54, DNA binding domain 326 484 1.7E-72 T 14-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding JV59_37490 de18c4fbd940a0a7bf7b4022cefc98a5 486 Gene3D G3DSA:1.10.10.1330 127 244 3.1E-23 T 14-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily JV59_37490 de18c4fbd940a0a7bf7b4022cefc98a5 486 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 5.8E-17 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 JV59_37490 de18c4fbd940a0a7bf7b4022cefc98a5 486 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 373 392 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 JV59_37490 de18c4fbd940a0a7bf7b4022cefc98a5 486 PIRSF PIRSF000774 1 486 1.1E-153 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 JV59_38540 a7e64237397a0a1af95eb344f4f2e575 429 SUPERFAMILY SSF53383 6 400 4.03E-90 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_38540 a7e64237397a0a1af95eb344f4f2e575 429 Pfam PF00202 Aminotransferase class-III 39 377 1.4E-56 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JV59_38540 a7e64237397a0a1af95eb344f4f2e575 429 Gene3D G3DSA:3.90.1150.10 11 398 1.1E-121 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_38540 a7e64237397a0a1af95eb344f4f2e575 429 Gene3D G3DSA:3.40.640.10 75 304 1.1E-121 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_19065 22900bc150926660d0772a608418801f 219 Gene3D G3DSA:3.40.50.2300 1 116 2.9E-28 T 14-10-2018 JV59_19065 22900bc150926660d0772a608418801f 219 SUPERFAMILY SSF52172 4 118 7.12E-28 T 14-10-2018 IPR011006 CheY-like superfamily JV59_19065 22900bc150926660d0772a608418801f 219 Pfam PF00072 Response regulator receiver domain 6 112 9.1E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_19065 22900bc150926660d0772a608418801f 219 SUPERFAMILY SSF46894 122 217 4.82E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_19065 22900bc150926660d0772a608418801f 219 SMART SM00862 146 217 9.1E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_19065 22900bc150926660d0772a608418801f 219 SMART SM00448 3 111 1.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_19065 22900bc150926660d0772a608418801f 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 217 8.1E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_19065 22900bc150926660d0772a608418801f 219 Gene3D G3DSA:1.10.10.10 117 219 8.4E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_19010 86e8f61fefafc9f329a7c070a6a3dcd4 248 Gene3D G3DSA:3.40.190.10 27 247 5.3E-76 T 14-10-2018 JV59_19010 86e8f61fefafc9f329a7c070a6a3dcd4 248 Gene3D G3DSA:3.40.190.10 103 213 5.3E-76 T 14-10-2018 JV59_19010 86e8f61fefafc9f329a7c070a6a3dcd4 248 SUPERFAMILY SSF53850 24 247 1.04E-59 T 14-10-2018 JV59_19010 86e8f61fefafc9f329a7c070a6a3dcd4 248 PIRSF PIRSF004846 6 248 3.9E-59 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 JV59_19010 86e8f61fefafc9f329a7c070a6a3dcd4 248 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 30 246 7.3E-54 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 JV59_19010 86e8f61fefafc9f329a7c070a6a3dcd4 248 Pfam PF13531 Bacterial extracellular solute-binding protein 26 247 5.5E-45 T 14-10-2018 JV59_16830 6cf03acb47fbd56c408ceb753132baf1 403 SUPERFAMILY SSF102114 12 342 1.01E-37 T 14-10-2018 JV59_16830 6cf03acb47fbd56c408ceb753132baf1 403 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 5 379 1.3E-139 T 14-10-2018 JV59_16830 6cf03acb47fbd56c408ceb753132baf1 403 Gene3D G3DSA:3.20.20.70 2 382 4.4E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_16830 6cf03acb47fbd56c408ceb753132baf1 403 Pfam PF13186 Iron-sulfur cluster-binding domain 273 332 4.8E-8 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain JV59_16830 6cf03acb47fbd56c408ceb753132baf1 403 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 272 361 1.2E-19 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain JV59_16830 6cf03acb47fbd56c408ceb753132baf1 403 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 164 391 6.0E-12 T 14-10-2018 JV59_19235 08fdd93c891082f9050c71e7868d37c1 543 SUPERFAMILY SSF52540 1 325 2.16E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_19235 08fdd93c891082f9050c71e7868d37c1 543 Gene3D G3DSA:3.40.50.300 1 337 1.1E-16 T 14-10-2018 JV59_19235 08fdd93c891082f9050c71e7868d37c1 543 Pfam PF11398 Protein of unknown function (DUF2813) 1 369 2.4E-144 T 14-10-2018 IPR022602 Protein of unknown function DUF2813 JV59_00995 06639ecbf2ae2b64eb669f5fe30401bf 272 SUPERFAMILY SSF48179 163 271 1.12E-29 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JV59_00995 06639ecbf2ae2b64eb669f5fe30401bf 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 7.1E-72 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 JV59_00995 06639ecbf2ae2b64eb669f5fe30401bf 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.06 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 JV59_00995 06639ecbf2ae2b64eb669f5fe30401bf 272 PIRSF PIRSF000193 3 271 1.1E-73 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 JV59_00995 06639ecbf2ae2b64eb669f5fe30401bf 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 99 7.3E-25 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal JV59_00995 06639ecbf2ae2b64eb669f5fe30401bf 272 Gene3D G3DSA:1.10.3730.10 165 272 9.2E-34 T 14-10-2018 JV59_00995 06639ecbf2ae2b64eb669f5fe30401bf 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 JV59_00995 06639ecbf2ae2b64eb669f5fe30401bf 272 SUPERFAMILY SSF51735 4 160 4.99E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_00995 06639ecbf2ae2b64eb669f5fe30401bf 272 Gene3D G3DSA:3.40.50.720 2 164 8.8E-51 T 14-10-2018 JV59_00995 06639ecbf2ae2b64eb669f5fe30401bf 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 5.0E-29 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 JV59_20825 22854cf8c13ccb2672123779c11e96d4 323 Gene3D G3DSA:3.40.190.10 117 204 8.2E-14 T 14-10-2018 JV59_20825 22854cf8c13ccb2672123779c11e96d4 323 Gene3D G3DSA:3.40.190.10 17 116 1.9E-8 T 14-10-2018 JV59_20825 22854cf8c13ccb2672123779c11e96d4 323 Pfam PF09084 NMT1/THI5 like 42 250 5.3E-14 T 14-10-2018 IPR015168 SsuA/THI5-like JV59_20825 22854cf8c13ccb2672123779c11e96d4 323 Gene3D G3DSA:3.40.190.10 209 321 1.3E-7 T 14-10-2018 JV59_20825 22854cf8c13ccb2672123779c11e96d4 323 SUPERFAMILY SSF53850 28 250 3.01E-26 T 14-10-2018 JV59_30320 9b2f37454b88a2f0bee4adac9955995e 289 Gene3D G3DSA:3.20.20.70 5 63 5.8E-12 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_30320 9b2f37454b88a2f0bee4adac9955995e 289 Gene3D G3DSA:3.20.20.70 64 275 3.0E-36 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_30320 9b2f37454b88a2f0bee4adac9955995e 289 SUPERFAMILY SSF102114 76 269 3.4E-14 T 14-10-2018 JV59_30320 9b2f37454b88a2f0bee4adac9955995e 289 Pfam PF13353 4Fe-4S single cluster domain 17 150 8.8E-11 T 14-10-2018 JV59_30320 9b2f37454b88a2f0bee4adac9955995e 289 PIRSF PIRSF000371 1 289 5.4E-88 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 JV59_30320 9b2f37454b88a2f0bee4adac9955995e 289 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 5 284 1.3E-123 T 14-10-2018 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW JV59_30320 9b2f37454b88a2f0bee4adac9955995e 289 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 47 58 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JV59_30320 9b2f37454b88a2f0bee4adac9955995e 289 SUPERFAMILY SSF54862 27 140 2.56E-16 T 14-10-2018 JV59_30320 9b2f37454b88a2f0bee4adac9955995e 289 ProSitePatterns PS01087 Radical activating enzymes signature. 19 40 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 JV59_30320 9b2f37454b88a2f0bee4adac9955995e 289 Pfam PF04055 Radical SAM superfamily 26 221 2.8E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JV59_01905 03ff4015a6b6af5299ffb3e4bea98faa 209 Pfam PF00293 NUDIX domain 59 163 3.4E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JV59_01905 03ff4015a6b6af5299ffb3e4bea98faa 209 Gene3D G3DSA:3.90.79.10 1 208 5.3E-64 T 14-10-2018 JV59_01905 03ff4015a6b6af5299ffb3e4bea98faa 209 SUPERFAMILY SSF55811 6 207 2.71E-46 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JV59_01905 03ff4015a6b6af5299ffb3e4bea98faa 209 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 198 3.2E-62 T 14-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 JV59_01905 03ff4015a6b6af5299ffb3e4bea98faa 209 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JV59_28415 bba9c3800b0ae401315e85786de67101 242 Gene3D G3DSA:1.10.10.2260 88 194 5.8E-49 T 14-10-2018 JV59_28415 bba9c3800b0ae401315e85786de67101 242 Gene3D G3DSA:1.10.10.2250 1 78 1.1E-34 T 14-10-2018 JV59_28415 bba9c3800b0ae401315e85786de67101 242 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 238 49.45 T 14-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 JV59_28415 bba9c3800b0ae401315e85786de67101 242 Pfam PF04288 MukE-like family 10 235 1.2E-117 T 14-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 JV59_37455 ead54bcfcde09b0dc6ee0fd849b0416f 264 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_37455 ead54bcfcde09b0dc6ee0fd849b0416f 264 Pfam PF00005 ABC transporter 23 170 4.4E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_37455 ead54bcfcde09b0dc6ee0fd849b0416f 264 Gene3D G3DSA:3.40.50.300 4 252 7.9E-65 T 14-10-2018 JV59_37455 ead54bcfcde09b0dc6ee0fd849b0416f 264 SMART SM00382 31 227 1.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_37455 ead54bcfcde09b0dc6ee0fd849b0416f 264 SUPERFAMILY SSF52540 6 238 1.03E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_35140 950bd2359a59d415603cf42294bfebf2 671 Pfam PF05960 Bacterial protein of unknown function (DUF885) 58 660 1.3E-82 T 14-10-2018 IPR010281 Protein of unknown function DUF885 JV59_27210 0017d5451dc1dfa47f44bac606c991a9 134 Gene3D G3DSA:3.10.580.10 2 133 2.0E-27 T 14-10-2018 JV59_27210 0017d5451dc1dfa47f44bac606c991a9 134 SMART SM00116 16 65 15.0 T 14-10-2018 IPR000644 CBS domain JV59_27210 0017d5451dc1dfa47f44bac606c991a9 134 SMART SM00116 83 130 1.4E-4 T 14-10-2018 IPR000644 CBS domain JV59_27210 0017d5451dc1dfa47f44bac606c991a9 134 Pfam PF00571 CBS domain 78 125 9.1E-10 T 14-10-2018 IPR000644 CBS domain JV59_27210 0017d5451dc1dfa47f44bac606c991a9 134 Pfam PF00571 CBS domain 9 64 0.005 T 14-10-2018 IPR000644 CBS domain JV59_27210 0017d5451dc1dfa47f44bac606c991a9 134 SUPERFAMILY SSF54631 7 126 1.64E-24 T 14-10-2018 JV59_29105 13064fa4874923136a72653d5b777e0f 148 Gene3D G3DSA:2.40.128.270 40 143 3.7E-29 T 14-10-2018 IPR038670 HslJ-like superfamily JV59_29105 13064fa4874923136a72653d5b777e0f 148 Pfam PF03724 META domain 35 140 4.1E-26 T 14-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ JV59_30195 1f748797c404efbebb685d60d56f46a1 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 14 395 4.3E-117 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 JV59_30195 1f748797c404efbebb685d60d56f46a1 401 Pfam PF07690 Major Facilitator Superfamily 25 364 4.3E-49 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_30195 1f748797c404efbebb685d60d56f46a1 401 SUPERFAMILY SSF103473 5 400 9.42E-65 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_30195 1f748797c404efbebb685d60d56f46a1 401 Gene3D G3DSA:1.20.1720.10 18 396 1.8E-101 T 14-10-2018 JV59_19935 58362e0cd48bb78290f29799e3a58e1b 344 Gene3D G3DSA:3.30.70.270 168 330 7.0E-27 T 14-10-2018 JV59_19935 58362e0cd48bb78290f29799e3a58e1b 344 SUPERFAMILY SSF55073 176 318 3.45E-23 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_19935 58362e0cd48bb78290f29799e3a58e1b 344 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 170 317 9.4E-17 T 14-10-2018 IPR000160 GGDEF domain JV59_19935 58362e0cd48bb78290f29799e3a58e1b 344 Pfam PF00990 Diguanylate cyclase, GGDEF domain 174 318 4.5E-22 T 14-10-2018 IPR000160 GGDEF domain JV59_19935 58362e0cd48bb78290f29799e3a58e1b 344 SMART SM00267 157 331 2.5E-20 T 14-10-2018 IPR000160 GGDEF domain JV59_39335 f52c9b7803970628ca334ba4a579356d 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 1.3E-111 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39335 f52c9b7803970628ca334ba4a579356d 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.892 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39335 f52c9b7803970628ca334ba4a579356d 288 SUPERFAMILY SSF52943 2 288 1.44E-96 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39335 f52c9b7803970628ca334ba4a579356d 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39335 f52c9b7803970628ca334ba4a579356d 288 Gene3D G3DSA:1.10.287.80 6 284 4.7E-111 T 14-10-2018 JV59_39335 f52c9b7803970628ca334ba4a579356d 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 6.5E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39335 f52c9b7803970628ca334ba4a579356d 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 6.5E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39335 f52c9b7803970628ca334ba4a579356d 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 6.5E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39335 f52c9b7803970628ca334ba4a579356d 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 6.5E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39335 f52c9b7803970628ca334ba4a579356d 288 Gene3D G3DSA:3.40.1380.10 61 207 4.7E-111 T 14-10-2018 JV59_39335 f52c9b7803970628ca334ba4a579356d 288 Pfam PF00231 ATP synthase 5 287 3.6E-99 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_21215 4e85d3dbb9988080925a37ab32704107 664 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 556 661 1.4E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_21215 4e85d3dbb9988080925a37ab32704107 664 SMART SM01049 175 238 1.8 T 14-10-2018 IPR033480 Single Cache domain 2 JV59_21215 4e85d3dbb9988080925a37ab32704107 664 SMART SM01049 47 134 0.0046 T 14-10-2018 IPR033480 Single Cache domain 2 JV59_21215 4e85d3dbb9988080925a37ab32704107 664 Gene3D G3DSA:3.30.565.10 512 663 7.4E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_21215 4e85d3dbb9988080925a37ab32704107 664 Gene3D G3DSA:1.20.1480.50 282 378 2.5E-8 T 14-10-2018 JV59_21215 4e85d3dbb9988080925a37ab32704107 664 Gene3D G3DSA:3.30.450.20 187 281 4.0E-17 T 14-10-2018 JV59_21215 4e85d3dbb9988080925a37ab32704107 664 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 621 1.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_21215 4e85d3dbb9988080925a37ab32704107 664 PRINTS PR00344 Bacterial sensor protein C-terminal signature 624 642 1.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_21215 4e85d3dbb9988080925a37ab32704107 664 PRINTS PR00344 Bacterial sensor protein C-terminal signature 593 607 1.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_21215 4e85d3dbb9988080925a37ab32704107 664 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 660 1.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_21215 4e85d3dbb9988080925a37ab32704107 664 Gene3D G3DSA:3.30.450.20 55 186 2.6E-21 T 14-10-2018 JV59_21215 4e85d3dbb9988080925a37ab32704107 664 Gene3D G3DSA:1.10.287.130 404 505 9.6E-19 T 14-10-2018 JV59_21215 4e85d3dbb9988080925a37ab32704107 664 Pfam PF08269 Cache domain 31 286 2.2E-51 T 14-10-2018 IPR004010 Double Cache domain 2 JV59_21215 4e85d3dbb9988080925a37ab32704107 664 SMART SM00387 553 663 5.0E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_21215 4e85d3dbb9988080925a37ab32704107 664 SUPERFAMILY SSF55874 517 660 1.57E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_21215 4e85d3dbb9988080925a37ab32704107 664 SMART SM00304 317 371 9.7E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_21215 4e85d3dbb9988080925a37ab32704107 664 SUPERFAMILY SSF47384 418 500 4.12E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_21215 4e85d3dbb9988080925a37ab32704107 664 SUPERFAMILY SSF158472 317 368 1.18E-6 T 14-10-2018 JV59_20970 4dd050360d7d6b56b960d144d3fde2c5 272 Gene3D G3DSA:3.30.1130.10 14 130 2.1E-42 T 14-10-2018 JV59_20970 4dd050360d7d6b56b960d144d3fde2c5 272 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 14 122 7.7E-43 T 14-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 JV59_20970 4dd050360d7d6b56b960d144d3fde2c5 272 Pfam PF14489 QueF-like protein 186 259 1.1E-26 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 JV59_20970 4dd050360d7d6b56b960d144d3fde2c5 272 PIRSF PIRSF004750 1 272 6.3E-116 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 JV59_20970 4dd050360d7d6b56b960d144d3fde2c5 272 Gene3D G3DSA:3.30.1130.10 136 272 6.5E-55 T 14-10-2018 JV59_20970 4dd050360d7d6b56b960d144d3fde2c5 272 SUPERFAMILY SSF55620 177 256 6.74E-8 T 14-10-2018 JV59_20970 4dd050360d7d6b56b960d144d3fde2c5 272 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 272 129.722 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 JV59_20970 4dd050360d7d6b56b960d144d3fde2c5 272 TIGRFAM TIGR03138 QueF: queuine synthase 5 272 2.3E-116 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 JV59_21340 4c08d926a925cdf5acd9c2cae2ac5891 417 SUPERFAMILY SSF54373 256 343 7.32E-18 T 14-10-2018 JV59_21340 4c08d926a925cdf5acd9c2cae2ac5891 417 Pfam PF01266 FAD dependent oxidoreductase 5 382 2.8E-65 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JV59_21340 4c08d926a925cdf5acd9c2cae2ac5891 417 SUPERFAMILY SSF51905 4 401 4.75E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_22780 655c4c91a2df3fe003084669b23e7663 209 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 125 138 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 JV59_22780 655c4c91a2df3fe003084669b23e7663 209 Gene3D G3DSA:3.20.20.70 2 209 5.9E-76 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_22780 655c4c91a2df3fe003084669b23e7663 209 Pfam PF01081 KDPG and KHG aldolase 6 200 1.6E-76 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 JV59_22780 655c4c91a2df3fe003084669b23e7663 209 SUPERFAMILY SSF51569 2 207 1.3E-70 T 14-10-2018 JV59_22780 655c4c91a2df3fe003084669b23e7663 209 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 37 46 - T 14-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 JV59_22780 655c4c91a2df3fe003084669b23e7663 209 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 6 207 1.5E-84 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 JV59_35110 e0e6620ef8992a42af52a19df060fab6 174 Pfam PF03358 NADPH-dependent FMN reductase 1 139 1.1E-27 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 JV59_35110 e0e6620ef8992a42af52a19df060fab6 174 SUPERFAMILY SSF52218 1 173 1.22E-36 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_35110 e0e6620ef8992a42af52a19df060fab6 174 Gene3D G3DSA:3.40.50.360 1 174 1.6E-34 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_39470 0ea6245f619baedda0eef4e97a205cf2 251 Pfam PF00899 ThiF family 10 246 1.0E-57 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 JV59_39470 0ea6245f619baedda0eef4e97a205cf2 251 SUPERFAMILY SSF69572 2 250 1.57E-74 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 JV59_39470 0ea6245f619baedda0eef4e97a205cf2 251 Gene3D G3DSA:3.40.50.720 2 251 2.2E-82 T 14-10-2018 JV59_30995 d15c955ba4846265e9742cb87100578d 159 Pfam PF11748 Protein of unknown function (DUF3306) 4 101 6.4E-15 T 14-10-2018 IPR021735 Protein of unknown function DUF3306 JV59_22210 d44f392a9786ec42542cce12cb66ac71 361 Gene3D G3DSA:3.40.50.720 6 340 5.5E-107 T 14-10-2018 JV59_22210 d44f392a9786ec42542cce12cb66ac71 361 SUPERFAMILY SSF51735 5 137 2.44E-10 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_22210 d44f392a9786ec42542cce12cb66ac71 361 PIRSF PIRSF017494 1 357 8.3E-126 T 14-10-2018 IPR010091 Thiazolinyl imide reductase JV59_22210 d44f392a9786ec42542cce12cb66ac71 361 Gene3D G3DSA:3.30.360.10 126 292 5.5E-107 T 14-10-2018 JV59_22210 d44f392a9786ec42542cce12cb66ac71 361 TIGRFAM TIGR01761 thiaz-red: thiazolinyl imide reductase 3 340 2.4E-92 T 14-10-2018 IPR010091 Thiazolinyl imide reductase JV59_22210 d44f392a9786ec42542cce12cb66ac71 361 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 122 9.5E-22 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 JV59_36060 b3f1031745f45a39edebf7e5ea46b990 232 SUPERFAMILY SSF109755 10 225 9.52E-70 T 14-10-2018 JV59_36060 b3f1031745f45a39edebf7e5ea46b990 232 Pfam PF01895 PhoU domain 128 210 1.2E-16 T 14-10-2018 IPR026022 PhoU domain JV59_36060 b3f1031745f45a39edebf7e5ea46b990 232 Pfam PF01895 PhoU domain 23 108 6.4E-22 T 14-10-2018 IPR026022 PhoU domain JV59_36060 b3f1031745f45a39edebf7e5ea46b990 232 Gene3D G3DSA:1.20.58.220 119 229 2.1E-34 T 14-10-2018 IPR038078 PhoU-like domain superfamily JV59_36060 b3f1031745f45a39edebf7e5ea46b990 232 Gene3D G3DSA:1.20.58.220 1 118 2.3E-40 T 14-10-2018 IPR038078 PhoU-like domain superfamily JV59_36060 b3f1031745f45a39edebf7e5ea46b990 232 PIRSF PIRSF003107 4 223 3.6E-69 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 JV59_36060 b3f1031745f45a39edebf7e5ea46b990 232 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 6.7E-76 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 JV59_27305 a5a76898dbd54b9779d060b32a8a168d 273 Pfam PF02592 Putative vitamin uptake transporter 94 247 5.2E-20 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 JV59_28215 f0b929bb3b9eeff683a1c92a03ee2c3b 146 PIRSF PIRSF006173 1 144 2.6E-64 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 JV59_28215 f0b929bb3b9eeff683a1c92a03ee2c3b 146 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 41.026 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 JV59_28215 f0b929bb3b9eeff683a1c92a03ee2c3b 146 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 1.4E-8 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein JV59_01510 48136b3cffee8d45eadd3833b51733a9 304 SMART SM00382 29 212 4.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_01510 48136b3cffee8d45eadd3833b51733a9 304 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_01510 48136b3cffee8d45eadd3833b51733a9 304 SUPERFAMILY SSF52540 3 230 1.71E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_01510 48136b3cffee8d45eadd3833b51733a9 304 Pfam PF00005 ABC transporter 20 164 1.0E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_01510 48136b3cffee8d45eadd3833b51733a9 304 Gene3D G3DSA:3.40.50.300 1 236 1.7E-66 T 14-10-2018 JV59_23315 84b7c70ac6c01b3e84014e65f36233b2 244 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 211 5.8E-25 T 14-10-2018 JV59_23315 84b7c70ac6c01b3e84014e65f36233b2 244 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 126 205 1.0E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_23315 84b7c70ac6c01b3e84014e65f36233b2 244 SUPERFAMILY SSF56784 1 234 7.34E-45 T 14-10-2018 IPR036412 HAD-like superfamily JV59_23315 84b7c70ac6c01b3e84014e65f36233b2 244 Gene3D G3DSA:1.10.150.240 18 110 2.1E-30 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JV59_23315 84b7c70ac6c01b3e84014e65f36233b2 244 Gene3D G3DSA:3.40.50.1000 6 221 2.1E-30 T 14-10-2018 IPR023214 HAD superfamily JV59_29645 0b521786add23149f11b657e322f852a 279 Gene3D G3DSA:3.90.550.10 1 251 3.2E-59 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_29645 0b521786add23149f11b657e322f852a 279 Pfam PF02709 N-terminal domain of galactosyltransferase 180 227 3.0E-9 T 14-10-2018 IPR027791 Galactosyltransferase, C-terminal Reactome: R-HSA-2022854|Reactome: R-HSA-975577 JV59_29645 0b521786add23149f11b657e322f852a 279 Pfam PF00535 Glycosyl transferase family 2 4 126 2.0E-23 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 JV59_29645 0b521786add23149f11b657e322f852a 279 SUPERFAMILY SSF53448 1 242 9.38E-47 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_20490 dd9691c1416e96ad8be04458faa10b33 780 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 320 714 1.3E-124 T 14-10-2018 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 JV59_20490 dd9691c1416e96ad8be04458faa10b33 780 Gene3D G3DSA:2.70.98.40 11 260 1.1E-63 T 14-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily JV59_20490 dd9691c1416e96ad8be04458faa10b33 780 SUPERFAMILY SSF48208 273 766 5.39E-112 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 JV59_20490 dd9691c1416e96ad8be04458faa10b33 780 PIRSF PIRSF036289 7 777 2.6E-216 T 14-10-2018 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase JV59_20490 dd9691c1416e96ad8be04458faa10b33 780 SUPERFAMILY SSF74650 11 258 1.76E-53 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 JV59_20490 dd9691c1416e96ad8be04458faa10b33 780 Gene3D G3DSA:1.50.10.10 315 701 2.9E-138 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 JV59_20490 dd9691c1416e96ad8be04458faa10b33 780 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 719 768 5.7E-15 T 14-10-2018 IPR005194 Glycoside hydrolase family 65, C-terminal JV59_20490 dd9691c1416e96ad8be04458faa10b33 780 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 19 257 3.3E-51 T 14-10-2018 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 JV59_20490 dd9691c1416e96ad8be04458faa10b33 780 Gene3D G3DSA:2.60.420.10 702 779 1.4E-23 T 14-10-2018 JV59_17930 9dcf682e173c244d6a45d9b428e21f16 303 Pfam PF02558 Ketopantoate reductase PanE/ApbA 5 140 4.3E-15 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain JV59_17930 9dcf682e173c244d6a45d9b428e21f16 303 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 179 297 6.2E-9 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain JV59_17930 9dcf682e173c244d6a45d9b428e21f16 303 Gene3D G3DSA:1.10.1040.10 178 302 5.9E-9 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JV59_17930 9dcf682e173c244d6a45d9b428e21f16 303 Gene3D G3DSA:3.40.50.720 1 170 3.4E-17 T 14-10-2018 JV59_17930 9dcf682e173c244d6a45d9b428e21f16 303 SUPERFAMILY SSF51735 2 130 9.2E-8 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_17930 9dcf682e173c244d6a45d9b428e21f16 303 SUPERFAMILY SSF48179 180 295 7.48E-6 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JV59_35055 d70ca8467144e081d81f7a0d771c9f11 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 1.6E-163 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 JV59_35055 d70ca8467144e081d81f7a0d771c9f11 504 PIRSF PIRSF000485 1 480 6.5E-168 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 JV59_35055 d70ca8467144e081d81f7a0d771c9f11 504 SUPERFAMILY SSF56235 2 256 1.29E-70 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JV59_35055 d70ca8467144e081d81f7a0d771c9f11 504 Gene3D G3DSA:3.60.20.10 2 411 4.0E-156 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JV59_35055 d70ca8467144e081d81f7a0d771c9f11 504 Gene3D G3DSA:3.40.50.2020 276 440 4.0E-156 T 14-10-2018 JV59_35055 d70ca8467144e081d81f7a0d771c9f11 504 Pfam PF13522 Glutamine amidotransferase domain 63 207 1.1E-16 T 14-10-2018 JV59_35055 d70ca8467144e081d81f7a0d771c9f11 504 SUPERFAMILY SSF53271 249 482 5.38E-69 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like JV59_35055 d70ca8467144e081d81f7a0d771c9f11 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 463 44.421 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 JV59_21610 2232afbcfceb0fec48373afb838909c6 107 Gene3D G3DSA:3.30.70.20 2 101 1.6E-26 T 14-10-2018 JV59_21610 2232afbcfceb0fec48373afb838909c6 107 Pfam PF11953 Domain of unknown function (DUF3470) 68 107 1.7E-17 T 14-10-2018 IPR022569 Ferredoxin, C-terminal JV59_21610 2232afbcfceb0fec48373afb838909c6 107 SUPERFAMILY SSF54862 3 100 9.64E-24 T 14-10-2018 JV59_21610 2232afbcfceb0fec48373afb838909c6 107 Pfam PF13187 4Fe-4S dicluster domain 8 55 3.8E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JV59_21610 2232afbcfceb0fec48373afb838909c6 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 5.1E-11 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 JV59_21610 2232afbcfceb0fec48373afb838909c6 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 5.1E-11 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 JV59_21610 2232afbcfceb0fec48373afb838909c6 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 5.1E-11 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 JV59_32480 412d033057112b668f238ee8eeb1137e 257 SUPERFAMILY SSF81301 63 222 1.96E-15 T 14-10-2018 JV59_32480 412d033057112b668f238ee8eeb1137e 257 Gene3D G3DSA:3.30.460.10 71 194 7.8E-6 T 14-10-2018 JV59_31125 617f795b5f83dd3d7f0ae8aca8873317 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 187 1.1E-81 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO JV59_31125 617f795b5f83dd3d7f0ae8aca8873317 206 SUPERFAMILY SSF46626 21 202 5.24E-28 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_31125 617f795b5f83dd3d7f0ae8aca8873317 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 186 8.8E-83 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO JV59_31125 617f795b5f83dd3d7f0ae8aca8873317 206 Gene3D G3DSA:1.10.760.10 46 206 6.2E-73 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_28675 3ac9aacafa1c8cc98ab2bd4fa048f870 809 SMART SM00448 598 712 6.6E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_28675 3ac9aacafa1c8cc98ab2bd4fa048f870 809 SMART SM00388 352 417 2.1E-23 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_28675 3ac9aacafa1c8cc98ab2bd4fa048f870 809 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 465 572 3.8E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_28675 3ac9aacafa1c8cc98ab2bd4fa048f870 809 Gene3D G3DSA:3.30.450.20 30 204 1.0E-18 T 14-10-2018 JV59_28675 3ac9aacafa1c8cc98ab2bd4fa048f870 809 SUPERFAMILY SSF55874 406 572 1.83E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_28675 3ac9aacafa1c8cc98ab2bd4fa048f870 809 Gene3D G3DSA:3.40.50.2300 579 719 7.6E-33 T 14-10-2018 JV59_28675 3ac9aacafa1c8cc98ab2bd4fa048f870 809 SUPERFAMILY SSF47384 339 418 1.2E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_28675 3ac9aacafa1c8cc98ab2bd4fa048f870 809 SMART SM00387 464 579 1.9E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_28675 3ac9aacafa1c8cc98ab2bd4fa048f870 809 Pfam PF00512 His Kinase A (phospho-acceptor) domain 352 417 6.1E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_28675 3ac9aacafa1c8cc98ab2bd4fa048f870 809 Pfam PF00072 Response regulator receiver domain 601 712 2.9E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_28675 3ac9aacafa1c8cc98ab2bd4fa048f870 809 Gene3D G3DSA:3.30.565.10 416 578 4.1E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_28675 3ac9aacafa1c8cc98ab2bd4fa048f870 809 Gene3D G3DSA:1.10.287.130 318 415 2.3E-26 T 14-10-2018 JV59_28675 3ac9aacafa1c8cc98ab2bd4fa048f870 809 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 8.5E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_28675 3ac9aacafa1c8cc98ab2bd4fa048f870 809 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 532 8.5E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_28675 3ac9aacafa1c8cc98ab2bd4fa048f870 809 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 557 8.5E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_28675 3ac9aacafa1c8cc98ab2bd4fa048f870 809 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 576 8.5E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_28675 3ac9aacafa1c8cc98ab2bd4fa048f870 809 SUPERFAMILY SSF52172 596 728 1.31E-30 T 14-10-2018 IPR011006 CheY-like superfamily JV59_23025 fc4320100b3e02830c9876581d084cfc 372 Gene3D G3DSA:3.40.50.2300 157 353 3.5E-9 T 14-10-2018 JV59_23025 fc4320100b3e02830c9876581d084cfc 372 Gene3D G3DSA:3.40.50.2300 57 147 9.4E-7 T 14-10-2018 JV59_23025 fc4320100b3e02830c9876581d084cfc 372 SUPERFAMILY SSF53822 60 346 7.85E-22 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_23025 fc4320100b3e02830c9876581d084cfc 372 Pfam PF13407 Periplasmic binding protein domain 76 322 9.2E-11 T 14-10-2018 IPR025997 Periplasmic binding protein JV59_23240 81d62a50b3e7f1d69bf4e53c4737ac7b 182 Gene3D G3DSA:1.20.1290.10 13 181 6.3E-36 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JV59_23240 81d62a50b3e7f1d69bf4e53c4737ac7b 182 SUPERFAMILY SSF69118 1 181 9.6E-47 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JV59_35130 eeddc28ab87311f6c7fb41db6b71c480 176 Pfam PF04315 Elongation factor P hydroxylase 11 169 2.6E-72 T 14-10-2018 IPR007411 Elongation factor P hydroxylase JV59_40175 41a03dd37e890e833a164bf09e42306a 270 Pfam PF04072 Leucine carboxyl methyltransferase 70 130 1.3E-6 T 14-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 JV59_40175 41a03dd37e890e833a164bf09e42306a 270 Gene3D G3DSA:3.40.50.150 7 248 3.1E-19 T 14-10-2018 JV59_40175 41a03dd37e890e833a164bf09e42306a 270 SUPERFAMILY SSF53335 18 252 2.41E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_40175 41a03dd37e890e833a164bf09e42306a 270 PIRSF PIRSF028177 3 270 1.3E-72 T 14-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 JV59_22775 74bb30259d34e71e689603180685ea3c 816 Gene3D G3DSA:3.30.379.10 26 162 1.1E-22 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 JV59_22775 74bb30259d34e71e689603180685ea3c 816 SUPERFAMILY SSF51445 165 620 3.52E-96 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_22775 74bb30259d34e71e689603180685ea3c 816 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 165 421 4.8E-99 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 JV59_22775 74bb30259d34e71e689603180685ea3c 816 Gene3D G3DSA:3.20.20.80 163 448 6.6E-89 T 14-10-2018 JV59_22775 74bb30259d34e71e689603180685ea3c 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 312 325 2.7E-40 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 JV59_22775 74bb30259d34e71e689603180685ea3c 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 159 176 2.7E-40 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 JV59_22775 74bb30259d34e71e689603180685ea3c 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 290 308 2.7E-40 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 JV59_22775 74bb30259d34e71e689603180685ea3c 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 188 209 2.7E-40 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 JV59_22775 74bb30259d34e71e689603180685ea3c 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 124 144 2.7E-40 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 JV59_22775 74bb30259d34e71e689603180685ea3c 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 240 257 2.7E-40 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 JV59_22775 74bb30259d34e71e689603180685ea3c 816 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 29 161 4.0E-14 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal JV59_22775 74bb30259d34e71e689603180685ea3c 816 SUPERFAMILY SSF55545 30 164 9.42E-31 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 JV59_22775 74bb30259d34e71e689603180685ea3c 816 Gene3D G3DSA:3.20.20.80 548 634 4.9E-14 T 14-10-2018 JV59_01350 57c29f3e8bddf913efc8aea237d71fbe 252 Pfam PF01975 Survival protein SurE 8 186 4.7E-61 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 JV59_01350 57c29f3e8bddf913efc8aea237d71fbe 252 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 7 237 3.7E-73 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 JV59_01350 57c29f3e8bddf913efc8aea237d71fbe 252 Gene3D G3DSA:3.40.1210.10 1 252 2.3E-96 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 JV59_01350 57c29f3e8bddf913efc8aea237d71fbe 252 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 6 252 41.384 T 14-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 JV59_01350 57c29f3e8bddf913efc8aea237d71fbe 252 SUPERFAMILY SSF64167 6 251 3.27E-86 T 14-10-2018 JV59_27140 0831c9b514132b3b009b01be1952c155 85 SUPERFAMILY SSF55594 1 82 1.15E-26 T 14-10-2018 IPR035895 HPr-like superfamily JV59_27140 0831c9b514132b3b009b01be1952c155 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 3.5E-28 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like JV59_27140 0831c9b514132b3b009b01be1952c155 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.7E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like JV59_27140 0831c9b514132b3b009b01be1952c155 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.7E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like JV59_27140 0831c9b514132b3b009b01be1952c155 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.7E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like JV59_27140 0831c9b514132b3b009b01be1952c155 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site JV59_27140 0831c9b514132b3b009b01be1952c155 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site JV59_27140 0831c9b514132b3b009b01be1952c155 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.7E-27 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like JV59_27140 0831c9b514132b3b009b01be1952c155 85 Gene3D G3DSA:3.30.1340.10 1 85 1.1E-32 T 14-10-2018 IPR035895 HPr-like superfamily JV59_27175 589b21e8bf136c996ee5fb5423b207cf 307 SMART SM00244 22 180 7.2E-60 T 14-10-2018 IPR001107 Band 7 domain JV59_27175 589b21e8bf136c996ee5fb5423b207cf 307 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 14-10-2018 IPR018080 Band 7/stomatin-like, conserved site JV59_27175 589b21e8bf136c996ee5fb5423b207cf 307 Gene3D G3DSA:3.30.479.30 50 182 5.5E-44 T 14-10-2018 JV59_27175 589b21e8bf136c996ee5fb5423b207cf 307 PRINTS PR00721 Stomatin signature 175 196 1.9E-29 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JV59_27175 589b21e8bf136c996ee5fb5423b207cf 307 PRINTS PR00721 Stomatin signature 112 129 1.9E-29 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JV59_27175 589b21e8bf136c996ee5fb5423b207cf 307 PRINTS PR00721 Stomatin signature 132 155 1.9E-29 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JV59_27175 589b21e8bf136c996ee5fb5423b207cf 307 PRINTS PR00721 Stomatin signature 77 98 1.9E-29 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JV59_27175 589b21e8bf136c996ee5fb5423b207cf 307 PRINTS PR00721 Stomatin signature 156 174 1.9E-29 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JV59_27175 589b21e8bf136c996ee5fb5423b207cf 307 Pfam PF01145 SPFH domain / Band 7 family 26 195 1.4E-34 T 14-10-2018 IPR001107 Band 7 domain JV59_27175 589b21e8bf136c996ee5fb5423b207cf 307 SUPERFAMILY SSF117892 53 187 2.09E-41 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily JV59_27175 589b21e8bf136c996ee5fb5423b207cf 307 Pfam PF16200 C-terminal region of band_7 242 302 3.9E-7 T 14-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 JV59_14260 fccaddac3e0a8181919a303dbaf2c354 426 SUPERFAMILY SSF53187 84 348 1.73E-40 T 14-10-2018 JV59_14260 fccaddac3e0a8181919a303dbaf2c354 426 Pfam PF09940 Domain of unknown function (DUF2172) 60 150 5.3E-35 T 14-10-2018 IPR032610 Domain of unknown function DUF2172 JV59_14260 fccaddac3e0a8181919a303dbaf2c354 426 Pfam PF16254 Domain of unknown function (DUF4910) 9 349 3.4E-103 T 14-10-2018 IPR032589 Domain of unknown function DUF4910 JV59_14260 fccaddac3e0a8181919a303dbaf2c354 426 Gene3D G3DSA:3.50.30.90 58 154 1.1E-130 T 14-10-2018 JV59_14260 fccaddac3e0a8181919a303dbaf2c354 426 Gene3D G3DSA:1.10.10.10 353 426 3.0E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_14260 fccaddac3e0a8181919a303dbaf2c354 426 PIRSF PIRSF015244 1 425 6.6E-166 T 14-10-2018 IPR012353 Uncharacterised conserved protein UCP01524, polysaccharide biosynthesis aminopeptidase-like JV59_14260 fccaddac3e0a8181919a303dbaf2c354 426 Gene3D G3DSA:3.40.630.10 13 333 1.1E-130 T 14-10-2018 JV59_14260 fccaddac3e0a8181919a303dbaf2c354 426 Pfam PF16221 winged helix-turn-helix 355 424 1.0E-21 T 14-10-2018 IPR032622 UCP01524, winged helix-turn-helix domain JV59_27080 74894387a27cdcc00fbd3f7a1fd68711 260 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 21 173 24.95 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 JV59_27080 74894387a27cdcc00fbd3f7a1fd68711 260 Pfam PF05036 Sporulation related domain 188 257 5.7E-10 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 JV59_27080 74894387a27cdcc00fbd3f7a1fd68711 260 Gene3D G3DSA:2.40.40.10 80 174 4.3E-38 T 14-10-2018 IPR036908 RlpA-like domain superfamily JV59_27080 74894387a27cdcc00fbd3f7a1fd68711 260 SUPERFAMILY SSF50685 83 173 3.45E-11 T 14-10-2018 IPR036908 RlpA-like domain superfamily JV59_27080 74894387a27cdcc00fbd3f7a1fd68711 260 Pfam PF03330 Lytic transglycolase 80 169 2.5E-27 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain JV59_27080 74894387a27cdcc00fbd3f7a1fd68711 260 SUPERFAMILY SSF110997 189 258 1.96E-12 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 JV59_27080 74894387a27cdcc00fbd3f7a1fd68711 260 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 83 177 1.8E-44 T 14-10-2018 IPR012997 Rare lipoprotein A JV59_15950 83e8a87f0fbe39d932fcf6fdc700277e 329 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 6.4E-20 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JV59_15950 83e8a87f0fbe39d932fcf6fdc700277e 329 SMART SM00382 32 230 5.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_15950 83e8a87f0fbe39d932fcf6fdc700277e 329 Gene3D G3DSA:3.40.50.300 1 327 5.9E-98 T 14-10-2018 JV59_15950 83e8a87f0fbe39d932fcf6fdc700277e 329 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_15950 83e8a87f0fbe39d932fcf6fdc700277e 329 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 9.6E-24 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JV59_15950 83e8a87f0fbe39d932fcf6fdc700277e 329 SUPERFAMILY SSF52540 3 251 1.04E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_15950 83e8a87f0fbe39d932fcf6fdc700277e 329 Pfam PF00005 ABC transporter 24 180 5.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_02945 763afa889525fa3a25a34c6ffefeac73 496 Gene3D G3DSA:1.10.10.10 10 131 4.6E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_02945 763afa889525fa3a25a34c6ffefeac73 496 Pfam PF00486 Transcriptional regulatory protein, C terminal 34 109 2.8E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_02945 763afa889525fa3a25a34c6ffefeac73 496 SUPERFAMILY SSF46894 14 110 7.09E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_02945 763afa889525fa3a25a34c6ffefeac73 496 SMART SM00862 32 110 2.2E-8 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_18745 f905f8ea56ac4e2ca593638c7d599515 139 Gene3D G3DSA:3.30.1330.40 1 131 5.2E-19 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_18745 f905f8ea56ac4e2ca593638c7d599515 139 Pfam PF01042 Endoribonuclease L-PSP 11 127 7.2E-12 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 JV59_18745 f905f8ea56ac4e2ca593638c7d599515 139 SUPERFAMILY SSF55298 3 128 5.03E-19 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_28040 e33003d83e157f226072cdb299b94d24 261 SMART SM00342 172 254 7.7E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_28040 e33003d83e157f226072cdb299b94d24 261 SUPERFAMILY SSF46689 207 256 4.93E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_28040 e33003d83e157f226072cdb299b94d24 261 Pfam PF12833 Helix-turn-helix domain 178 255 2.9E-14 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_28040 e33003d83e157f226072cdb299b94d24 261 Gene3D G3DSA:1.10.10.60 151 259 5.4E-23 T 14-10-2018 JV59_27580 2928e9bc401c99214caec65aba64b825 341 Gene3D G3DSA:3.30.530.50 96 205 2.8E-15 T 14-10-2018 JV59_27580 2928e9bc401c99214caec65aba64b825 341 Gene3D G3DSA:3.30.310.170 220 341 2.6E-40 T 14-10-2018 JV59_27580 2928e9bc401c99214caec65aba64b825 341 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 337 34.535 T 14-10-2018 IPR014524 Outer membrane protein assembly factor BamC JV59_27580 2928e9bc401c99214caec65aba64b825 341 PIRSF PIRSF026343 4 339 1.1E-132 T 14-10-2018 IPR014524 Outer membrane protein assembly factor BamC JV59_27580 2928e9bc401c99214caec65aba64b825 341 Pfam PF06804 NlpB/DapX lipoprotein 35 335 1.1E-100 T 14-10-2018 IPR010653 NlpB/DapX lipoprotein JV59_18630 27d45693a8f50631a7670692dc4e8909 362 SUPERFAMILY SSF53901 7 325 2.31E-64 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_18630 27d45693a8f50631a7670692dc4e8909 362 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 324 4.8E-109 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 JV59_18630 27d45693a8f50631a7670692dc4e8909 362 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 324 4.1E-35 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 JV59_18630 27d45693a8f50631a7670692dc4e8909 362 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 324 63.923 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 JV59_18630 27d45693a8f50631a7670692dc4e8909 362 Gene3D G3DSA:3.40.47.10 1 362 1.5E-152 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_18630 27d45693a8f50631a7670692dc4e8909 362 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 1.2E-28 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 JV59_38310 ed1072746ec3b28cc19b937ec79143da 323 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 323 52.567 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 JV59_38310 ed1072746ec3b28cc19b937ec79143da 323 Pfam PF00152 tRNA synthetases class II (D, K and N) 11 319 4.1E-45 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_38310 ed1072746ec3b28cc19b937ec79143da 323 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 14 318 1.5E-129 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 JV59_38310 ed1072746ec3b28cc19b937ec79143da 323 PRINTS PR00982 Lysyl-tRNA synthetase signature 97 114 5.9E-5 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JV59_38310 ed1072746ec3b28cc19b937ec79143da 323 PRINTS PR00982 Lysyl-tRNA synthetase signature 29 39 5.9E-5 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JV59_38310 ed1072746ec3b28cc19b937ec79143da 323 Gene3D G3DSA:3.30.930.10 3 323 6.8E-111 T 14-10-2018 JV59_38310 ed1072746ec3b28cc19b937ec79143da 323 SUPERFAMILY SSF55681 10 321 2.59E-82 T 14-10-2018 JV59_23475 fd164603db473c954721a28e17932b2b 288 Gene3D G3DSA:1.10.3720.10 57 278 8.9E-36 T 14-10-2018 IPR035906 MetI-like superfamily JV59_23475 fd164603db473c954721a28e17932b2b 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 271 9.7E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_23475 fd164603db473c954721a28e17932b2b 288 SUPERFAMILY SSF161098 53 269 1.31E-40 T 14-10-2018 IPR035906 MetI-like superfamily JV59_35645 a3c3870b9963fb737529bc521b3f31df 208 Gene3D G3DSA:3.40.50.2020 1 207 1.0E-73 T 14-10-2018 JV59_35645 a3c3870b9963fb737529bc521b3f31df 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 5.3E-65 T 14-10-2018 JV59_35645 a3c3870b9963fb737529bc521b3f31df 208 SUPERFAMILY SSF53271 3 206 1.01E-66 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like JV59_35645 a3c3870b9963fb737529bc521b3f31df 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 2 207 3.5E-92 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 JV59_35645 a3c3870b9963fb737529bc521b3f31df 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.419 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 JV59_21580 559e1772f64dafb348932a092093a6e9 143 Pfam PF01322 Cytochrome C' 24 140 1.3E-25 T 14-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 JV59_21580 559e1772f64dafb348932a092093a6e9 143 Gene3D G3DSA:1.20.120.10 19 142 9.5E-28 T 14-10-2018 JV59_21580 559e1772f64dafb348932a092093a6e9 143 SUPERFAMILY SSF47175 18 141 2.21E-31 T 14-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 JV59_38725 1bedf41066d313702e2ad62c0fda99f6 561 Gene3D G3DSA:3.10.20.310 61 154 5.5E-14 T 14-10-2018 JV59_38725 1bedf41066d313702e2ad62c0fda99f6 561 Pfam PF17287 POTRA domain 155 207 3.7E-17 T 14-10-2018 IPR035251 ShlB, POTRA domain JV59_38725 1bedf41066d313702e2ad62c0fda99f6 561 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 212 524 5.6E-88 T 14-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal JV59_38725 1bedf41066d313702e2ad62c0fda99f6 561 Gene3D G3DSA:2.40.160.50 185 561 1.1E-79 T 14-10-2018 JV59_38725 1bedf41066d313702e2ad62c0fda99f6 561 Pfam PF08479 POTRA domain, ShlB-type 80 154 1.8E-18 T 14-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type JV59_38725 1bedf41066d313702e2ad62c0fda99f6 561 PIRSF PIRSF029745 3 561 8.6E-130 T 14-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 JV59_26810 56e79cd8d053a9372d3b55da34335caa 301 Gene3D G3DSA:3.40.50.20 1 114 5.4E-39 T 14-10-2018 JV59_26810 56e79cd8d053a9372d3b55da34335caa 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 4.6E-88 T 14-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 JV59_26810 56e79cd8d053a9372d3b55da34335caa 301 Gene3D G3DSA:3.30.470.80 182 299 1.6E-43 T 14-10-2018 JV59_26810 56e79cd8d053a9372d3b55da34335caa 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 53.516 T 14-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK JV59_26810 56e79cd8d053a9372d3b55da34335caa 301 SUPERFAMILY SSF56059 98 288 1.12E-49 T 14-10-2018 JV59_26810 56e79cd8d053a9372d3b55da34335caa 301 Gene3D G3DSA:3.30.1490.20 115 181 3.6E-26 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JV59_26810 56e79cd8d053a9372d3b55da34335caa 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 5.4E-69 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 JV59_24880 a3200bb3bdae3220e1e6acf9d7da84f7 659 Pfam PF16738 Starch-binding module 26 485 552 5.0E-17 T 14-10-2018 IPR031965 Starch-binding module 26 KEGG: 00500+3.2.1.1 JV59_24880 a3200bb3bdae3220e1e6acf9d7da84f7 659 SUPERFAMILY SSF51445 26 363 1.03E-77 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_24880 a3200bb3bdae3220e1e6acf9d7da84f7 659 SMART SM00632 371 465 9.9E-27 T 14-10-2018 IPR031319 Alpha-amylase, C-terminal domain Reactome: R-HSA-189085 JV59_24880 a3200bb3bdae3220e1e6acf9d7da84f7 659 Gene3D G3DSA:3.20.20.80 26 366 9.9E-139 T 14-10-2018 JV59_24880 a3200bb3bdae3220e1e6acf9d7da84f7 659 Gene3D G3DSA:2.60.40.1180 368 466 5.4E-23 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta JV59_24880 a3200bb3bdae3220e1e6acf9d7da84f7 659 SMART SM00642 28 361 2.4E-77 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_24880 a3200bb3bdae3220e1e6acf9d7da84f7 659 PRINTS PR00110 Alpha-amylase signature 267 279 3.0E-24 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 JV59_24880 a3200bb3bdae3220e1e6acf9d7da84f7 659 PRINTS PR00110 Alpha-amylase signature 210 228 3.0E-24 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 JV59_24880 a3200bb3bdae3220e1e6acf9d7da84f7 659 PRINTS PR00110 Alpha-amylase signature 182 193 3.0E-24 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 JV59_24880 a3200bb3bdae3220e1e6acf9d7da84f7 659 PRINTS PR00110 Alpha-amylase signature 103 114 3.0E-24 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 JV59_24880 a3200bb3bdae3220e1e6acf9d7da84f7 659 PRINTS PR00110 Alpha-amylase signature 71 88 3.0E-24 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 JV59_24880 a3200bb3bdae3220e1e6acf9d7da84f7 659 SUPERFAMILY SSF51011 368 465 2.02E-21 T 14-10-2018 JV59_24880 a3200bb3bdae3220e1e6acf9d7da84f7 659 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 374 462 4.4E-7 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 JV59_24880 a3200bb3bdae3220e1e6acf9d7da84f7 659 Gene3D G3DSA:2.60.40.10 479 569 7.1E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_24880 a3200bb3bdae3220e1e6acf9d7da84f7 659 Pfam PF00128 Alpha amylase, catalytic domain 83 281 7.6E-14 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_18010 f1b057c9f13f09693dac3ec3fd036097 575 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 32 575 8.6E-252 T 14-10-2018 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative JV59_18010 f1b057c9f13f09693dac3ec3fd036097 575 SUPERFAMILY SSF161098 316 554 1.85E-29 T 14-10-2018 IPR035906 MetI-like superfamily JV59_18010 f1b057c9f13f09693dac3ec3fd036097 575 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 395 558 2.3E-7 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_18010 f1b057c9f13f09693dac3ec3fd036097 575 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 131 287 8.7E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_18010 f1b057c9f13f09693dac3ec3fd036097 575 SUPERFAMILY SSF161098 31 286 3.14E-45 T 14-10-2018 IPR035906 MetI-like superfamily JV59_18010 f1b057c9f13f09693dac3ec3fd036097 575 Gene3D G3DSA:1.10.3720.10 29 292 1.3E-51 T 14-10-2018 IPR035906 MetI-like superfamily JV59_18010 f1b057c9f13f09693dac3ec3fd036097 575 Gene3D G3DSA:1.10.3720.10 312 565 6.8E-28 T 14-10-2018 IPR035906 MetI-like superfamily JV59_32555 736f417d044e264e455e1861df438994 217 Gene3D G3DSA:1.20.1050.10 88 216 1.6E-50 T 14-10-2018 JV59_32555 736f417d044e264e455e1861df438994 217 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 5 214 2.3E-88 T 14-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 JV59_32555 736f417d044e264e455e1861df438994 217 SUPERFAMILY SSF47616 86 214 1.12E-29 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily JV59_32555 736f417d044e264e455e1861df438994 217 Pfam PF14497 Glutathione S-transferase, C-terminal domain 129 204 3.9E-5 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal JV59_32555 736f417d044e264e455e1861df438994 217 Gene3D G3DSA:3.40.30.10 6 83 1.1E-23 T 14-10-2018 JV59_32555 736f417d044e264e455e1861df438994 217 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 82 2.0E-13 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 JV59_32555 736f417d044e264e455e1861df438994 217 SUPERFAMILY SSF52833 4 82 1.66E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_32375 baa4f47c750ca2923e004af07103b100 222 SMART SM00530 12 67 2.7E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_32375 baa4f47c750ca2923e004af07103b100 222 Gene3D G3DSA:1.10.260.40 2 73 3.6E-16 T 14-10-2018 JV59_32375 baa4f47c750ca2923e004af07103b100 222 Pfam PF01381 Helix-turn-helix 13 64 3.7E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_32375 baa4f47c750ca2923e004af07103b100 222 Gene3D G3DSA:2.10.109.10 88 218 1.3E-48 T 14-10-2018 JV59_32375 baa4f47c750ca2923e004af07103b100 222 SUPERFAMILY SSF47413 3 71 1.02E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_32375 baa4f47c750ca2923e004af07103b100 222 SUPERFAMILY SSF51306 92 216 2.44E-26 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily JV59_32375 baa4f47c750ca2923e004af07103b100 222 Pfam PF00717 Peptidase S24-like 134 207 1.1E-13 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C JV59_37505 548c00324841d02117c4b7717fc451fb 287 PIRSF PIRSF005052 1 286 4.4E-107 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 JV59_37505 548c00324841d02117c4b7717fc451fb 287 Gene3D G3DSA:3.40.50.300 1 168 1.2E-6 T 14-10-2018 JV59_37505 548c00324841d02117c4b7717fc451fb 287 Pfam PF03668 P-loop ATPase protein family 1 284 4.5E-112 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 JV59_37505 548c00324841d02117c4b7717fc451fb 287 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 40.078 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 JV59_37505 548c00324841d02117c4b7717fc451fb 287 SUPERFAMILY SSF52540 1 155 3.86E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_20660 6f88378663e0163040c5cb7569a9d35c 285 Pfam PF13409 Glutathione S-transferase, N-terminal domain 52 126 7.2E-6 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 JV59_20660 6f88378663e0163040c5cb7569a9d35c 285 Pfam PF13410 Glutathione S-transferase, C-terminal domain 179 244 1.6E-9 T 14-10-2018 JV59_20660 6f88378663e0163040c5cb7569a9d35c 285 Gene3D G3DSA:3.40.30.10 17 254 3.2E-114 T 14-10-2018 JV59_20660 6f88378663e0163040c5cb7569a9d35c 285 SUPERFAMILY SSF52833 38 130 5.85E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_20660 6f88378663e0163040c5cb7569a9d35c 285 SUPERFAMILY SSF47616 116 258 7.5E-33 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily JV59_20660 6f88378663e0163040c5cb7569a9d35c 285 Gene3D G3DSA:1.20.1050.10 132 248 3.2E-114 T 14-10-2018 JV59_19380 14433b0ae602c018ea498d937f4b3b00 279 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 152 253 1.4E-15 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 JV59_19380 14433b0ae602c018ea498d937f4b3b00 279 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 11 96 2.7E-10 T 14-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain JV59_19380 14433b0ae602c018ea498d937f4b3b00 279 Gene3D G3DSA:2.60.120.330 1 279 4.4E-95 T 14-10-2018 IPR027443 Isopenicillin N synthase-like JV59_19380 14433b0ae602c018ea498d937f4b3b00 279 SUPERFAMILY SSF51197 7 276 6.73E-61 T 14-10-2018 JV59_22695 d225ffd1dde67c6bc0f142db0af88140 455 Gene3D G3DSA:3.40.720.10 150 297 1.4E-22 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 JV59_22695 d225ffd1dde67c6bc0f142db0af88140 455 Gene3D G3DSA:3.40.720.10 14 103 1.0E-14 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 JV59_22695 d225ffd1dde67c6bc0f142db0af88140 455 SUPERFAMILY SSF53649 27 303 1.14E-33 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 JV59_22695 d225ffd1dde67c6bc0f142db0af88140 455 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 29 97 7.5E-6 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 JV59_22695 d225ffd1dde67c6bc0f142db0af88140 455 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 160 229 4.2E-10 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 JV59_24310 d211a59bd42e9da1e4bb992ea753f251 250 Gene3D G3DSA:3.40.50.720 1 250 1.2E-61 T 14-10-2018 JV59_24310 d211a59bd42e9da1e4bb992ea753f251 250 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 184 0.0011 T 14-10-2018 JV59_24310 d211a59bd42e9da1e4bb992ea753f251 250 SUPERFAMILY SSF51735 4 250 5.68E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_24310 d211a59bd42e9da1e4bb992ea753f251 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_24310 d211a59bd42e9da1e4bb992ea753f251 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 2.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_24310 d211a59bd42e9da1e4bb992ea753f251 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_24310 d211a59bd42e9da1e4bb992ea753f251 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_24310 d211a59bd42e9da1e4bb992ea753f251 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_24310 d211a59bd42e9da1e4bb992ea753f251 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 248 8.1E-47 T 14-10-2018 JV59_33035 bfa5944a1b8b4c0d65f836e2e845c74c 563 Pfam PF00072 Response regulator receiver domain 450 559 1.9E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_33035 bfa5944a1b8b4c0d65f836e2e845c74c 563 SUPERFAMILY SSF52172 445 562 1.71E-34 T 14-10-2018 IPR011006 CheY-like superfamily JV59_33035 bfa5944a1b8b4c0d65f836e2e845c74c 563 Gene3D G3DSA:3.30.565.10 268 433 3.1E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_33035 bfa5944a1b8b4c0d65f836e2e845c74c 563 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 380 3.6E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_33035 bfa5944a1b8b4c0d65f836e2e845c74c 563 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 3.6E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_33035 bfa5944a1b8b4c0d65f836e2e845c74c 563 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 424 3.6E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_33035 bfa5944a1b8b4c0d65f836e2e845c74c 563 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 3.6E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_33035 bfa5944a1b8b4c0d65f836e2e845c74c 563 Gene3D G3DSA:3.40.50.2300 443 563 3.7E-37 T 14-10-2018 JV59_33035 bfa5944a1b8b4c0d65f836e2e845c74c 563 SMART SM00387 316 427 4.3E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_33035 bfa5944a1b8b4c0d65f836e2e845c74c 563 SUPERFAMILY SSF55874 258 427 1.1E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_33035 bfa5944a1b8b4c0d65f836e2e845c74c 563 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 269 2.4E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_33035 bfa5944a1b8b4c0d65f836e2e845c74c 563 SMART SM00448 448 559 5.9E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_33035 bfa5944a1b8b4c0d65f836e2e845c74c 563 SUPERFAMILY SSF47384 189 269 4.12E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_33035 bfa5944a1b8b4c0d65f836e2e845c74c 563 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 426 5.8E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_33035 bfa5944a1b8b4c0d65f836e2e845c74c 563 Gene3D G3DSA:1.10.287.130 182 267 3.5E-22 T 14-10-2018 JV59_33035 bfa5944a1b8b4c0d65f836e2e845c74c 563 SMART SM00388 204 269 1.6E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_00735 97b133d12972412c7174ea5f231c6214 1502 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 378 533 1.7E-34 T 14-10-2018 JV59_00735 97b133d12972412c7174ea5f231c6214 1502 Pfam PF04519 Polymer-forming cytoskeletal 199 300 1.9E-6 T 14-10-2018 IPR007607 Bactofilin A/B JV59_00735 97b133d12972412c7174ea5f231c6214 1502 SMART SM00560 395 530 0.0044 T 14-10-2018 IPR006558 LamG-like jellyroll fold JV59_00735 97b133d12972412c7174ea5f231c6214 1502 SUPERFAMILY SSF49899 551 807 2.07E-20 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily JV59_00735 97b133d12972412c7174ea5f231c6214 1502 Gene3D G3DSA:2.60.120.200 317 538 5.4E-35 T 14-10-2018 JV59_00735 97b133d12972412c7174ea5f231c6214 1502 SUPERFAMILY SSF49899 304 538 3.91E-38 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily JV59_23145 ec433cd1c02a0efbd882ea906591a819 662 Gene3D G3DSA:3.40.630.30 337 534 1.4E-67 T 14-10-2018 JV59_23145 ec433cd1c02a0efbd882ea906591a819 662 Gene3D G3DSA:3.40.50.11040 2 162 2.1E-17 T 14-10-2018 JV59_23145 ec433cd1c02a0efbd882ea906591a819 662 SUPERFAMILY SSF52540 148 277 2.5E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_23145 ec433cd1c02a0efbd882ea906591a819 662 Pfam PF13718 GNAT acetyltransferase 2 374 487 1.2E-19 T 14-10-2018 IPR000182 GNAT domain JV59_23145 ec433cd1c02a0efbd882ea906591a819 662 Pfam PF13718 GNAT acetyltransferase 2 491 534 7.8E-10 T 14-10-2018 IPR000182 GNAT domain JV59_23145 ec433cd1c02a0efbd882ea906591a819 662 Pfam PF08351 Domain of unknown function (DUF1726) 64 118 1.7E-7 T 14-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 JV59_23145 ec433cd1c02a0efbd882ea906591a819 662 Gene3D G3DSA:3.40.50.12320 171 329 1.3E-45 T 14-10-2018 JV59_23145 ec433cd1c02a0efbd882ea906591a819 662 Pfam PF05127 Helicase 173 339 5.7E-57 T 14-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 JV59_23145 ec433cd1c02a0efbd882ea906591a819 662 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 16 662 40.896 T 14-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 JV59_23145 ec433cd1c02a0efbd882ea906591a819 662 SUPERFAMILY SSF55729 368 534 1.14E-10 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_25290 cf4646840659418f941468d2393c017f 411 SUPERFAMILY SSF103473 25 405 1.09E-52 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_25290 cf4646840659418f941468d2393c017f 411 Gene3D G3DSA:1.20.1720.10 22 403 2.7E-77 T 14-10-2018 JV59_25290 cf4646840659418f941468d2393c017f 411 Pfam PF07690 Major Facilitator Superfamily 32 369 2.9E-40 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 329 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 SUPERFAMILY SSF57783 704 746 2.04E-5 T 14-10-2018 JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 SMART SM00436 139 227 6.6E-48 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 Pfam PF01131 DNA topoisomerase 164 570 1.5E-127 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 Gene3D G3DSA:2.20.25.10 812 869 5.5E-25 T 14-10-2018 JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 112 125 3.6E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 197 215 3.6E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 320 329 3.6E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 3.6E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 495 509 3.6E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 602 627 4.0E-5 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 712 749 4.4E-9 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 SUPERFAMILY SSF57783 748 811 2.38E-19 T 14-10-2018 JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 Pfam PF08272 Topoisomerase I zinc-ribbon-like 828 868 1.2E-16 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 Pfam PF08272 Topoisomerase I zinc-ribbon-like 761 797 4.5E-11 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 639 7.7E-249 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 Pfam PF01751 Toprim domain 5 148 8.7E-32 T 14-10-2018 IPR006171 TOPRIM domain JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 Gene3D G3DSA:3.30.65.10 699 748 2.0E-6 T 14-10-2018 JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 Gene3D G3DSA:3.30.65.10 749 811 2.0E-32 T 14-10-2018 JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 SUPERFAMILY SSF56712 3 614 6.93E-198 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 SMART SM00493 3 138 2.4E-31 T 14-10-2018 IPR006171 TOPRIM domain JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 736 54.947 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 Gene3D G3DSA:2.70.20.10 219 478 4.0E-163 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 SMART SM00437 278 532 2.3E-121 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 Gene3D G3DSA:1.10.460.10 171 576 4.0E-163 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 SUPERFAMILY SSF57783 813 869 2.38E-19 T 14-10-2018 JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 Gene3D G3DSA:1.10.290.10 286 410 4.0E-163 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 JV59_28350 1a19e8fe6477eb3034d70675e626ccee 875 Gene3D G3DSA:3.40.50.140 1 169 2.2E-66 T 14-10-2018 JV59_38245 948a1507dc332a3dffada3e1664cc4d8 877 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 535 547 - T 14-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 JV59_38245 948a1507dc332a3dffada3e1664cc4d8 877 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 877 17.882 T 14-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 JV59_38245 948a1507dc332a3dffada3e1664cc4d8 877 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 14-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 JV59_38245 948a1507dc332a3dffada3e1664cc4d8 877 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 877 1.3E-289 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 JV59_38245 948a1507dc332a3dffada3e1664cc4d8 877 SUPERFAMILY SSF51621 6 877 0.0 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JV59_38245 948a1507dc332a3dffada3e1664cc4d8 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 3.3E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 JV59_38245 948a1507dc332a3dffada3e1664cc4d8 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 3.3E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 JV59_38245 948a1507dc332a3dffada3e1664cc4d8 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 707 733 3.3E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 JV59_38245 948a1507dc332a3dffada3e1664cc4d8 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 533 553 3.3E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 JV59_38245 948a1507dc332a3dffada3e1664cc4d8 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 575 604 3.3E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 JV59_38245 948a1507dc332a3dffada3e1664cc4d8 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 3.3E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 JV59_38245 948a1507dc332a3dffada3e1664cc4d8 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 384 404 3.3E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 JV59_38245 948a1507dc332a3dffada3e1664cc4d8 877 Gene3D G3DSA:1.20.1440.90 273 387 2.4E-28 T 14-10-2018 JV59_34145 e34fe48510eca33f2ca7d192b7bde4c6 398 Pfam PF07075 Protein of unknown function (DUF1343) 48 396 1.4E-115 T 14-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 JV59_34145 e34fe48510eca33f2ca7d192b7bde4c6 398 Gene3D G3DSA:3.40.50.12170 25 398 3.0E-130 T 14-10-2018 JV59_34145 e34fe48510eca33f2ca7d192b7bde4c6 398 PIRSF PIRSF016719 318 397 6.7E-6 T 14-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 JV59_34145 e34fe48510eca33f2ca7d192b7bde4c6 398 PIRSF PIRSF016719 1 299 2.7E-92 T 14-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 JV59_19115 b8b2dbeb376fac804facb4ecfb3f7081 899 SUPERFAMILY SSF52210 297 457 6.8E-41 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 JV59_19115 b8b2dbeb376fac804facb4ecfb3f7081 899 Gene3D G3DSA:3.30.1490.20 511 588 1.7E-55 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JV59_19115 b8b2dbeb376fac804facb4ecfb3f7081 899 Gene3D G3DSA:3.40.50.261 295 465 4.4E-49 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 JV59_19115 b8b2dbeb376fac804facb4ecfb3f7081 899 SUPERFAMILY SSF56059 493 701 1.96E-28 T 14-10-2018 JV59_19115 b8b2dbeb376fac804facb4ecfb3f7081 899 SMART SM00881 7 102 4.1E-25 T 14-10-2018 IPR003781 CoA-binding GO:0048037 JV59_19115 b8b2dbeb376fac804facb4ecfb3f7081 899 SUPERFAMILY SSF55729 734 880 1.95E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_19115 b8b2dbeb376fac804facb4ecfb3f7081 899 Gene3D G3DSA:3.30.470.20 493 702 1.7E-55 T 14-10-2018 JV59_19115 b8b2dbeb376fac804facb4ecfb3f7081 899 Gene3D G3DSA:3.40.50.720 1 131 1.9E-34 T 14-10-2018 JV59_19115 b8b2dbeb376fac804facb4ecfb3f7081 899 SUPERFAMILY SSF52210 133 291 3.53E-37 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 JV59_19115 b8b2dbeb376fac804facb4ecfb3f7081 899 Pfam PF13380 CoA binding domain 11 137 3.8E-23 T 14-10-2018 IPR003781 CoA-binding GO:0048037 JV59_19115 b8b2dbeb376fac804facb4ecfb3f7081 899 Pfam PF13549 ATP-grasp domain 491 705 8.4E-67 T 14-10-2018 JV59_19115 b8b2dbeb376fac804facb4ecfb3f7081 899 SUPERFAMILY SSF51735 2 141 7.88E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_19115 b8b2dbeb376fac804facb4ecfb3f7081 899 Gene3D G3DSA:3.40.50.261 132 293 7.8E-51 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 JV59_19115 b8b2dbeb376fac804facb4ecfb3f7081 899 Pfam PF00583 Acetyltransferase (GNAT) family 772 875 4.8E-9 T 14-10-2018 IPR000182 GNAT domain JV59_19115 b8b2dbeb376fac804facb4ecfb3f7081 899 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 153 290 6.3E-50 T 14-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain JV59_19115 b8b2dbeb376fac804facb4ecfb3f7081 899 Gene3D G3DSA:3.40.630.30 729 898 2.2E-38 T 14-10-2018 JV59_31580 657fd186718f571802240a8767c050bb 126 SUPERFAMILY SSF53850 7 124 2.5E-12 T 14-10-2018 JV59_31580 657fd186718f571802240a8767c050bb 126 Gene3D G3DSA:3.40.190.10 85 115 6.5E-9 T 14-10-2018 JV59_31580 657fd186718f571802240a8767c050bb 126 Gene3D G3DSA:3.40.190.10 7 84 6.5E-9 T 14-10-2018 JV59_31580 657fd186718f571802240a8767c050bb 126 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 7 125 9.4E-8 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_16500 5d8991d71e5a935c1894d98767c4fd4b 369 Gene3D G3DSA:3.40.50.2000 174 346 1.1E-58 T 14-10-2018 JV59_16500 5d8991d71e5a935c1894d98767c4fd4b 369 Pfam PF00534 Glycosyl transferases group 1 187 340 1.0E-38 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 JV59_16500 5d8991d71e5a935c1894d98767c4fd4b 369 SUPERFAMILY SSF53756 54 363 8.64E-61 T 14-10-2018 JV59_16500 5d8991d71e5a935c1894d98767c4fd4b 369 Gene3D G3DSA:3.40.50.2000 80 359 1.1E-58 T 14-10-2018 JV59_38960 a9f6550195cc1754af95f3b871e1cbc9 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 14-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JV59_38960 a9f6550195cc1754af95f3b871e1cbc9 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 2.9E-137 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JV59_38960 a9f6550195cc1754af95f3b871e1cbc9 469 Gene3D G3DSA:3.10.20.70 2 104 1.7E-40 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JV59_38960 a9f6550195cc1754af95f3b871e1cbc9 469 SMART SM01230 102 379 1.8E-149 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JV59_38960 a9f6550195cc1754af95f3b871e1cbc9 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 JV59_38960 a9f6550195cc1754af95f3b871e1cbc9 469 SUPERFAMILY SSF55931 102 468 2.55E-136 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 JV59_38960 a9f6550195cc1754af95f3b871e1cbc9 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 3.6E-211 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JV59_38960 a9f6550195cc1754af95f3b871e1cbc9 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 9.0E-31 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 JV59_38960 a9f6550195cc1754af95f3b871e1cbc9 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 JV59_38960 a9f6550195cc1754af95f3b871e1cbc9 469 SUPERFAMILY SSF54368 3 100 5.89E-36 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JV59_38960 a9f6550195cc1754af95f3b871e1cbc9 469 Gene3D G3DSA:3.30.590.10 105 457 9.4E-147 T 14-10-2018 JV59_39115 31590b048989a2d5048b4500c82a1201 88 Gene3D G3DSA:1.10.1580.20 1 88 9.9E-44 T 14-10-2018 IPR038134 YihD-like superfamily JV59_39115 31590b048989a2d5048b4500c82a1201 88 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 1.3E-45 T 14-10-2018 IPR009383 Protein of unknown function DUF1040 JV59_39115 31590b048989a2d5048b4500c82a1201 88 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 4.0E-38 T 14-10-2018 IPR009383 Protein of unknown function DUF1040 JV59_28340 c242b1ef9307612e0a4fc9d924638af3 426 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 34.796 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 JV59_28340 c242b1ef9307612e0a4fc9d924638af3 426 Gene3D G3DSA:3.65.10.10 242 419 4.8E-162 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 JV59_28340 c242b1ef9307612e0a4fc9d924638af3 426 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 JV59_28340 c242b1ef9307612e0a4fc9d924638af3 426 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 1.2E-145 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 JV59_28340 c242b1ef9307612e0a4fc9d924638af3 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 421 4.4E-158 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 JV59_28340 c242b1ef9307612e0a4fc9d924638af3 426 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 JV59_28340 c242b1ef9307612e0a4fc9d924638af3 426 PIRSF PIRSF000505 1 426 1.6E-158 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 JV59_28340 c242b1ef9307612e0a4fc9d924638af3 426 Gene3D G3DSA:3.65.10.10 20 224 4.8E-162 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 JV59_28340 c242b1ef9307612e0a4fc9d924638af3 426 SUPERFAMILY SSF55205 1 424 5.1E-146 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 JV59_17730 879e4da987c6a0e4668836f5656b497e 398 Pfam PF00155 Aminotransferase class I and II 43 387 2.1E-73 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JV59_17730 879e4da987c6a0e4668836f5656b497e 398 SUPERFAMILY SSF53383 4 395 3.16E-120 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_17730 879e4da987c6a0e4668836f5656b497e 398 Gene3D G3DSA:3.90.1150.10 39 387 4.9E-134 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_17730 879e4da987c6a0e4668836f5656b497e 398 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 2.0E-206 T 14-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 JV59_17730 879e4da987c6a0e4668836f5656b497e 398 Gene3D G3DSA:3.40.640.10 58 296 4.9E-134 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_17730 879e4da987c6a0e4668836f5656b497e 398 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 JV59_17730 879e4da987c6a0e4668836f5656b497e 398 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.109 T 14-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 JV59_22500 86278e99615720912ae2e487c8e75b08 476 SUPERFAMILY SSF51338 28 455 3.09E-30 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JV59_22500 86278e99615720912ae2e487c8e75b08 476 Gene3D G3DSA:3.20.20.140 86 376 1.9E-133 T 14-10-2018 JV59_22500 86278e99615720912ae2e487c8e75b08 476 SUPERFAMILY SSF51556 85 384 4.19E-82 T 14-10-2018 IPR032466 Metal-dependent hydrolase JV59_22500 86278e99615720912ae2e487c8e75b08 476 Gene3D G3DSA:2.30.40.10 30 448 1.9E-133 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JV59_22500 86278e99615720912ae2e487c8e75b08 476 Pfam PF01979 Amidohydrolase family 82 432 6.4E-67 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JV59_01185 f3068b801a4933233d1ebfe9a8ce4087 161 Pfam PF00186 Dihydrofolate reductase 3 159 1.1E-60 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 JV59_01185 f3068b801a4933233d1ebfe9a8ce4087 161 SUPERFAMILY SSF53597 1 160 9.03E-58 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 JV59_01185 f3068b801a4933233d1ebfe9a8ce4087 161 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 14-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 JV59_01185 f3068b801a4933233d1ebfe9a8ce4087 161 PRINTS PR00070 Dihydrofolate reductase signature 14 24 7.6E-15 T 14-10-2018 JV59_01185 f3068b801a4933233d1ebfe9a8ce4087 161 PRINTS PR00070 Dihydrofolate reductase signature 41 52 7.6E-15 T 14-10-2018 JV59_01185 f3068b801a4933233d1ebfe9a8ce4087 161 PRINTS PR00070 Dihydrofolate reductase signature 92 106 7.6E-15 T 14-10-2018 JV59_01185 f3068b801a4933233d1ebfe9a8ce4087 161 PRINTS PR00070 Dihydrofolate reductase signature 28 36 7.6E-15 T 14-10-2018 JV59_01185 f3068b801a4933233d1ebfe9a8ce4087 161 PIRSF PIRSF000194 1 161 3.8E-62 T 14-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 JV59_01185 f3068b801a4933233d1ebfe9a8ce4087 161 Gene3D G3DSA:3.40.430.10 1 161 6.0E-60 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 JV59_17110 e76ecea24f6ee00af7d70f5c8ae2fb48 338 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 35 316 7.8E-50 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 JV59_17110 e76ecea24f6ee00af7d70f5c8ae2fb48 338 SUPERFAMILY SSF53850 123 262 5.01E-5 T 14-10-2018 JV59_17110 e76ecea24f6ee00af7d70f5c8ae2fb48 338 Gene3D G3DSA:3.40.190.170 26 338 5.0E-103 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily JV59_30745 acf087ed7bb7e24914c42cbe235ab702 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 1.0E-114 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_30745 acf087ed7bb7e24914c42cbe235ab702 456 PIRSF PIRSF006603 5 452 5.5E-59 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_30745 acf087ed7bb7e24914c42cbe235ab702 456 Pfam PF01554 MatE 17 176 1.5E-34 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_30745 acf087ed7bb7e24914c42cbe235ab702 456 Pfam PF01554 MatE 243 404 1.5E-35 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_33945 54a25062886bee2a9f55be27ef5b637e 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 6.2E-22 T 14-10-2018 JV59_33945 54a25062886bee2a9f55be27ef5b637e 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 9.1E-23 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_33945 54a25062886bee2a9f55be27ef5b637e 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 9.1E-23 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_33945 54a25062886bee2a9f55be27ef5b637e 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 9.1E-23 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_33945 54a25062886bee2a9f55be27ef5b637e 164 SUPERFAMILY SSF46785 12 70 2.62E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_33945 54a25062886bee2a9f55be27ef5b637e 164 Gene3D G3DSA:1.10.10.10 1 63 2.6E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_33945 54a25062886bee2a9f55be27ef5b637e 164 SUPERFAMILY SSF54909 74 158 7.11E-22 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_33945 54a25062886bee2a9f55be27ef5b637e 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site JV59_33945 54a25062886bee2a9f55be27ef5b637e 164 SMART SM00344 12 121 1.8E-55 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 JV59_33945 54a25062886bee2a9f55be27ef5b637e 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 9.2E-24 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JV59_33945 54a25062886bee2a9f55be27ef5b637e 164 Gene3D G3DSA:3.30.70.920 64 159 2.4E-24 T 14-10-2018 JV59_01135 7558b493444195e5d77aceb645d0e057 382 SUPERFAMILY SSF51735 3 203 2.67E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_01135 7558b493444195e5d77aceb645d0e057 382 Gene3D G3DSA:3.40.50.720 2 206 1.7E-76 T 14-10-2018 JV59_01135 7558b493444195e5d77aceb645d0e057 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 151 163 - T 14-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 JV59_01135 7558b493444195e5d77aceb645d0e057 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 3 124 6.2E-23 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 JV59_01135 7558b493444195e5d77aceb645d0e057 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 2 379 40.576 T 14-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 JV59_01135 7558b493444195e5d77aceb645d0e057 382 Gene3D G3DSA:1.10.1040.10 208 382 3.0E-64 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JV59_01135 7558b493444195e5d77aceb645d0e057 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 151 375 1.6E-57 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 JV59_01135 7558b493444195e5d77aceb645d0e057 382 PRINTS PR00084 Mannitol dehydrogenase signature 115 128 7.7E-18 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 JV59_01135 7558b493444195e5d77aceb645d0e057 382 PRINTS PR00084 Mannitol dehydrogenase signature 151 164 7.7E-18 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 JV59_01135 7558b493444195e5d77aceb645d0e057 382 PRINTS PR00084 Mannitol dehydrogenase signature 4 14 7.7E-18 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 JV59_01135 7558b493444195e5d77aceb645d0e057 382 PRINTS PR00084 Mannitol dehydrogenase signature 171 186 7.7E-18 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 JV59_01135 7558b493444195e5d77aceb645d0e057 382 SUPERFAMILY SSF48179 205 382 2.24E-44 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JV59_33145 d8112af8bc583349efeb0bfb4394b040 915 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 60 83 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 JV59_33145 d8112af8bc583349efeb0bfb4394b040 915 Gene3D G3DSA:3.30.830.10 743 897 5.0E-11 T 14-10-2018 JV59_33145 d8112af8bc583349efeb0bfb4394b040 915 SUPERFAMILY SSF63411 318 449 1.18E-6 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JV59_33145 d8112af8bc583349efeb0bfb4394b040 915 Pfam PF05193 Peptidase M16 inactive domain 197 372 2.5E-12 T 14-10-2018 IPR007863 Peptidase M16, C-terminal JV59_33145 d8112af8bc583349efeb0bfb4394b040 915 Pfam PF05193 Peptidase M16 inactive domain 666 845 1.1E-10 T 14-10-2018 IPR007863 Peptidase M16, C-terminal JV59_33145 d8112af8bc583349efeb0bfb4394b040 915 SUPERFAMILY SSF63411 25 248 6.46E-49 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JV59_33145 d8112af8bc583349efeb0bfb4394b040 915 Gene3D G3DSA:3.30.830.10 506 713 4.4E-20 T 14-10-2018 JV59_33145 d8112af8bc583349efeb0bfb4394b040 915 SUPERFAMILY SSF63411 755 892 2.97E-10 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JV59_33145 d8112af8bc583349efeb0bfb4394b040 915 Gene3D G3DSA:3.30.830.10 300 451 7.0E-7 T 14-10-2018 JV59_33145 d8112af8bc583349efeb0bfb4394b040 915 Gene3D G3DSA:3.30.830.10 26 248 2.7E-63 T 14-10-2018 JV59_33145 d8112af8bc583349efeb0bfb4394b040 915 Pfam PF00675 Insulinase (Peptidase family M16) 50 175 8.4E-29 T 14-10-2018 IPR011765 Peptidase M16, N-terminal JV59_33145 d8112af8bc583349efeb0bfb4394b040 915 SUPERFAMILY SSF63411 504 711 4.89E-23 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JV59_17145 a5ab917953ee6b6970eaa6974a8bd950 191 SUPERFAMILY SSF51645 21 185 1.57E-20 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 JV59_17145 a5ab917953ee6b6970eaa6974a8bd950 191 Gene3D G3DSA:2.170.170.11 13 134 7.2E-29 T 14-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 JV59_27065 bf93615e2399d892e1a2ce0f7d8000b0 217 Gene3D G3DSA:3.30.930.10 1 203 2.3E-64 T 14-10-2018 JV59_27065 bf93615e2399d892e1a2ce0f7d8000b0 217 SUPERFAMILY SSF55681 3 204 1.16E-70 T 14-10-2018 JV59_27065 bf93615e2399d892e1a2ce0f7d8000b0 217 Pfam PF03099 Biotin/lipoate A/B protein ligase family 59 158 5.9E-8 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 JV59_27065 bf93615e2399d892e1a2ce0f7d8000b0 217 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 25 203 6.8E-72 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 JV59_27065 bf93615e2399d892e1a2ce0f7d8000b0 217 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 37.972 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 JV59_27065 bf93615e2399d892e1a2ce0f7d8000b0 217 PIRSF PIRSF016262 1 216 1.4E-62 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 JV59_27065 bf93615e2399d892e1a2ce0f7d8000b0 217 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 14-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 JV59_27065 bf93615e2399d892e1a2ce0f7d8000b0 217 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 2.0E-23 T 14-10-2018 JV59_01200 9cbe7009b1480495618a7d0ba10694c9 268 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 JV59_01200 9cbe7009b1480495618a7d0ba10694c9 268 SUPERFAMILY SSF53335 8 264 8.68E-80 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_01200 9cbe7009b1480495618a7d0ba10694c9 268 Gene3D G3DSA:1.10.8.100 200 266 4.7E-24 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 JV59_01200 9cbe7009b1480495618a7d0ba10694c9 268 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 4.6E-77 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm JV59_01200 9cbe7009b1480495618a7d0ba10694c9 268 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 1.8E-87 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 JV59_01200 9cbe7009b1480495618a7d0ba10694c9 268 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 55.07 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 JV59_01200 9cbe7009b1480495618a7d0ba10694c9 268 SMART SM00650 25 197 6.9E-88 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 JV59_01200 9cbe7009b1480495618a7d0ba10694c9 268 Gene3D G3DSA:3.40.50.150 1 198 1.5E-65 T 14-10-2018 JV59_17910 804857c55a156c9120cafbbd60eaa758 223 SMART SM00862 23 98 2.4E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_17910 804857c55a156c9120cafbbd60eaa758 223 SUPERFAMILY SSF46894 6 100 2.66E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_17910 804857c55a156c9120cafbbd60eaa758 223 Gene3D G3DSA:1.10.10.10 3 117 6.5E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_17910 804857c55a156c9120cafbbd60eaa758 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 26 98 1.9E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_36995 ff33d68223e9bab39fc8bb1aaa648f6b 322 Gene3D G3DSA:3.30.70.1630 26 187 2.7E-40 T 14-10-2018 JV59_36995 ff33d68223e9bab39fc8bb1aaa648f6b 322 Gene3D G3DSA:2.40.30.160 190 310 1.2E-35 T 14-10-2018 JV59_36995 ff33d68223e9bab39fc8bb1aaa648f6b 322 SUPERFAMILY SSF101790 237 319 3.86E-20 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal JV59_36995 ff33d68223e9bab39fc8bb1aaa648f6b 322 SUPERFAMILY SSF103025 18 235 1.0E-52 T 14-10-2018 JV59_36995 ff33d68223e9bab39fc8bb1aaa648f6b 322 Gene3D G3DSA:3.30.70.1400 29 115 2.7E-40 T 14-10-2018 JV59_36995 ff33d68223e9bab39fc8bb1aaa648f6b 322 PIRSF PIRSF006487 19 185 5.0E-6 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 JV59_36995 ff33d68223e9bab39fc8bb1aaa648f6b 322 PIRSF PIRSF006487 176 317 0.83 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 JV59_36995 ff33d68223e9bab39fc8bb1aaa648f6b 322 Pfam PF01571 Aminomethyltransferase folate-binding domain 26 159 5.3E-7 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain JV59_36995 ff33d68223e9bab39fc8bb1aaa648f6b 322 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 315 41.702 T 14-10-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 JV59_36995 ff33d68223e9bab39fc8bb1aaa648f6b 322 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 182 245 4.5E-25 T 14-10-2018 IPR017703 YgfZ/GcvT conserved site JV59_19470 d8a04889ea2f8258bd54d3694e3b9731 283 SUPERFAMILY SSF81338 8 255 2.09E-73 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 JV59_19470 d8a04889ea2f8258bd54d3694e3b9731 283 ProSitePatterns PS00221 MIP family signature. 67 75 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 JV59_19470 d8a04889ea2f8258bd54d3694e3b9731 283 Pfam PF00230 Major intrinsic protein 5 251 7.3E-64 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 JV59_19470 d8a04889ea2f8258bd54d3694e3b9731 283 Gene3D G3DSA:1.20.1080.10 3 259 5.9E-96 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 JV59_19470 d8a04889ea2f8258bd54d3694e3b9731 283 PRINTS PR00783 Major intrinsic protein family signature 185 207 5.9E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 JV59_19470 d8a04889ea2f8258bd54d3694e3b9731 283 PRINTS PR00783 Major intrinsic protein family signature 49 73 5.9E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 JV59_19470 d8a04889ea2f8258bd54d3694e3b9731 283 PRINTS PR00783 Major intrinsic protein family signature 86 105 5.9E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 JV59_19470 d8a04889ea2f8258bd54d3694e3b9731 283 PRINTS PR00783 Major intrinsic protein family signature 234 254 5.9E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 JV59_19470 d8a04889ea2f8258bd54d3694e3b9731 283 PRINTS PR00783 Major intrinsic protein family signature 10 29 5.9E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 JV59_19470 d8a04889ea2f8258bd54d3694e3b9731 283 PRINTS PR00783 Major intrinsic protein family signature 152 170 5.9E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 JV59_19470 d8a04889ea2f8258bd54d3694e3b9731 283 TIGRFAM TIGR00861 MIP: MIP family channel proteins 14 251 1.1E-67 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 JV59_34020 ca557939b06839abbb4fe572e4b2969f 311 Gene3D G3DSA:3.40.190.100 106 233 2.5E-26 T 14-10-2018 JV59_34020 ca557939b06839abbb4fe572e4b2969f 311 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 24 295 2.6E-27 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 JV59_34020 ca557939b06839abbb4fe572e4b2969f 311 Gene3D G3DSA:3.40.190.10 25 304 2.5E-26 T 14-10-2018 JV59_34020 ca557939b06839abbb4fe572e4b2969f 311 SUPERFAMILY SSF53850 16 305 8.68E-30 T 14-10-2018 JV59_00840 5221bbfbc56f64068a1631bca60b9dfc 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 238 30.504 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 JV59_00840 5221bbfbc56f64068a1631bca60b9dfc 239 Gene3D G3DSA:3.40.50.150 29 239 2.4E-70 T 14-10-2018 JV59_00840 5221bbfbc56f64068a1631bca60b9dfc 239 SUPERFAMILY SSF53335 16 237 9.07E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_00840 5221bbfbc56f64068a1631bca60b9dfc 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 47 238 5.9E-68 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 JV59_00840 5221bbfbc56f64068a1631bca60b9dfc 239 Pfam PF02390 Putative methyltransferase 62 232 1.4E-57 T 14-10-2018 JV59_28680 4499ea916fbddb669d33a1e4028ee42a 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 31.096 T 14-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 JV59_28680 4499ea916fbddb669d33a1e4028ee42a 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 8.0E-61 T 14-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 JV59_28680 4499ea916fbddb669d33a1e4028ee42a 149 Pfam PF06610 L-alanine exporter 8 142 2.2E-67 T 14-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 JV59_26850 0ca4ff87162345db2436a133bcb25b57 321 PIRSF PIRSF005303 1 320 9.2E-80 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 JV59_26850 0ca4ff87162345db2436a133bcb25b57 321 SUPERFAMILY SSF56042 141 303 1.94E-33 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JV59_26850 0ca4ff87162345db2436a133bcb25b57 321 Pfam PF00586 AIR synthase related protein, N-terminal domain 28 137 4.8E-21 T 14-10-2018 IPR016188 PurM-like, N-terminal domain JV59_26850 0ca4ff87162345db2436a133bcb25b57 321 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 320 26.662 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 JV59_26850 0ca4ff87162345db2436a133bcb25b57 321 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 300 5.6E-7 T 14-10-2018 IPR010918 PurM-like, C-terminal domain JV59_26850 0ca4ff87162345db2436a133bcb25b57 321 Gene3D G3DSA:3.90.650.10 145 320 3.5E-47 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JV59_26850 0ca4ff87162345db2436a133bcb25b57 321 SUPERFAMILY SSF55326 3 138 1.57E-32 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JV59_26850 0ca4ff87162345db2436a133bcb25b57 321 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 320 1.2E-99 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 JV59_26850 0ca4ff87162345db2436a133bcb25b57 321 Gene3D G3DSA:3.30.1330.10 1 143 5.6E-41 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JV59_20600 58a7ceabb77544391ea872c4d950ac8e 572 Pfam PF00990 Diguanylate cyclase, GGDEF domain 385 542 4.7E-46 T 14-10-2018 IPR000160 GGDEF domain JV59_20600 58a7ceabb77544391ea872c4d950ac8e 572 SUPERFAMILY SSF55781 220 380 8.02E-10 T 14-10-2018 JV59_20600 58a7ceabb77544391ea872c4d950ac8e 572 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 381 545 6.6E-52 T 14-10-2018 IPR000160 GGDEF domain JV59_20600 58a7ceabb77544391ea872c4d950ac8e 572 Gene3D G3DSA:3.30.70.270 383 553 6.8E-55 T 14-10-2018 JV59_20600 58a7ceabb77544391ea872c4d950ac8e 572 Gene3D G3DSA:3.30.450.40 227 382 2.3E-10 T 14-10-2018 IPR029016 GAF-like domain superfamily JV59_20600 58a7ceabb77544391ea872c4d950ac8e 572 SMART SM00267 374 547 3.4E-59 T 14-10-2018 IPR000160 GGDEF domain JV59_20600 58a7ceabb77544391ea872c4d950ac8e 572 SUPERFAMILY SSF55073 390 546 3.06E-46 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_20600 58a7ceabb77544391ea872c4d950ac8e 572 SMART SM00065 241 382 0.0023 T 14-10-2018 IPR003018 GAF domain GO:0005515 JV59_39070 304bcf6a639b12eec5f135dad958c586 173 Hamap MF_00163 Peptide deformylase [def]. 2 162 30.69 T 14-10-2018 IPR023635 Peptide deformylase JV59_39070 304bcf6a639b12eec5f135dad958c586 173 PIRSF PIRSF004749 1 173 5.8E-55 T 14-10-2018 IPR023635 Peptide deformylase JV59_39070 304bcf6a639b12eec5f135dad958c586 173 PRINTS PR01576 Peptide deformylase signature 120 149 1.1E-37 T 14-10-2018 IPR023635 Peptide deformylase JV59_39070 304bcf6a639b12eec5f135dad958c586 173 PRINTS PR01576 Peptide deformylase signature 101 119 1.1E-37 T 14-10-2018 IPR023635 Peptide deformylase JV59_39070 304bcf6a639b12eec5f135dad958c586 173 PRINTS PR01576 Peptide deformylase signature 89 100 1.1E-37 T 14-10-2018 IPR023635 Peptide deformylase JV59_39070 304bcf6a639b12eec5f135dad958c586 173 PRINTS PR01576 Peptide deformylase signature 33 62 1.1E-37 T 14-10-2018 IPR023635 Peptide deformylase JV59_39070 304bcf6a639b12eec5f135dad958c586 173 Pfam PF01327 Polypeptide deformylase 4 152 8.0E-50 T 14-10-2018 IPR023635 Peptide deformylase JV59_39070 304bcf6a639b12eec5f135dad958c586 173 SUPERFAMILY SSF56420 3 165 1.24E-61 T 14-10-2018 IPR036821 Peptide deformylase superfamily JV59_39070 304bcf6a639b12eec5f135dad958c586 173 Gene3D G3DSA:3.90.45.10 1 169 2.3E-66 T 14-10-2018 IPR036821 Peptide deformylase superfamily JV59_39070 304bcf6a639b12eec5f135dad958c586 173 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 159 2.4E-60 T 14-10-2018 IPR023635 Peptide deformylase JV59_22015 3b8eaa2cd897c300a3d2d8a1150c3c97 198 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain JV59_22015 3b8eaa2cd897c300a3d2d8a1150c3c97 198 SUPERFAMILY SSF55804 1 148 3.92E-34 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 JV59_22015 3b8eaa2cd897c300a3d2d8a1150c3c97 198 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 148 1.5E-34 T 14-10-2018 IPR002178 PTS EIIA type-2 domain JV59_22015 3b8eaa2cd897c300a3d2d8a1150c3c97 198 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 135 9.6E-37 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 JV59_22015 3b8eaa2cd897c300a3d2d8a1150c3c97 198 Gene3D G3DSA:3.40.930.10 1 151 3.9E-35 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 JV59_18665 ac9d7bfda2c1fafc25381d423ce55890 325 SMART SM00833 239 322 0.0061 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JV59_18665 ac9d7bfda2c1fafc25381d423ce55890 325 SUPERFAMILY SSF52540 2 171 3.99E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_18665 ac9d7bfda2c1fafc25381d423ce55890 325 Gene3D G3DSA:3.40.50.300 1 196 7.7E-43 T 14-10-2018 JV59_18665 ac9d7bfda2c1fafc25381d423ce55890 325 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 4 174 8.2E-40 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain JV59_36765 23a93efdaa8ba25e256dcc3bfef20cdf 89 Pfam PF00312 Ribosomal protein S15 8 88 3.2E-36 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_36765 23a93efdaa8ba25e256dcc3bfef20cdf 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 3.2E-38 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_36765 23a93efdaa8ba25e256dcc3bfef20cdf 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_36765 23a93efdaa8ba25e256dcc3bfef20cdf 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.65 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_36765 23a93efdaa8ba25e256dcc3bfef20cdf 89 SMART SM01387 8 88 2.9E-51 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_36765 23a93efdaa8ba25e256dcc3bfef20cdf 89 SUPERFAMILY SSF47060 3 89 6.77E-35 T 14-10-2018 IPR009068 S15/NS1, RNA-binding JV59_36765 23a93efdaa8ba25e256dcc3bfef20cdf 89 Gene3D G3DSA:1.10.287.10 2 89 4.7E-35 T 14-10-2018 JV59_36765 23a93efdaa8ba25e256dcc3bfef20cdf 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 2.0E-19 T 14-10-2018 JV59_19525 b37b9a6d25914faf0cb4d7e3915db370 155 Pfam PF13353 4Fe-4S single cluster domain 12 151 1.4E-51 T 14-10-2018 JV59_19525 b37b9a6d25914faf0cb4d7e3915db370 155 Gene3D G3DSA:3.20.20.70 2 155 2.3E-21 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_19525 b37b9a6d25914faf0cb4d7e3915db370 155 SUPERFAMILY SSF102114 24 113 3.27E-7 T 14-10-2018 JV59_19525 b37b9a6d25914faf0cb4d7e3915db370 155 PIRSF PIRSF000368 1 155 1.1E-59 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 JV59_19525 b37b9a6d25914faf0cb4d7e3915db370 155 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 JV59_19525 b37b9a6d25914faf0cb4d7e3915db370 155 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 153 7.1E-62 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 JV59_29675 1ec3617d92ec746217f310041f551fe0 622 SUPERFAMILY SSF52172 493 612 2.13E-28 T 14-10-2018 IPR011006 CheY-like superfamily JV59_29675 1ec3617d92ec746217f310041f551fe0 622 Gene3D G3DSA:3.30.565.10 322 479 4.9E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_29675 1ec3617d92ec746217f310041f551fe0 622 Pfam PF13426 PAS domain 136 238 3.9E-18 T 14-10-2018 IPR000014 PAS domain JV59_29675 1ec3617d92ec746217f310041f551fe0 622 SMART SM00091 125 192 1.7E-4 T 14-10-2018 IPR000014 PAS domain JV59_29675 1ec3617d92ec746217f310041f551fe0 622 Pfam PF00072 Response regulator receiver domain 497 608 3.3E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_29675 1ec3617d92ec746217f310041f551fe0 622 Gene3D G3DSA:3.40.50.2300 481 617 4.4E-32 T 14-10-2018 JV59_29675 1ec3617d92ec746217f310041f551fe0 622 SUPERFAMILY SSF55785 132 239 1.92E-24 T 14-10-2018 IPR035965 PAS domain superfamily JV59_29675 1ec3617d92ec746217f310041f551fe0 622 SMART SM00086 198 239 2.0E-7 T 14-10-2018 IPR001610 PAC motif JV59_29675 1ec3617d92ec746217f310041f551fe0 622 Gene3D G3DSA:3.30.450.20 127 267 1.7E-35 T 14-10-2018 JV59_29675 1ec3617d92ec746217f310041f551fe0 622 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 131 246 2.9E-19 T 14-10-2018 IPR000014 PAS domain JV59_29675 1ec3617d92ec746217f310041f551fe0 622 SUPERFAMILY SSF55874 314 484 9.03E-5 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_29675 1ec3617d92ec746217f310041f551fe0 622 Gene3D G3DSA:1.10.287.130 268 321 4.9E-8 T 14-10-2018 JV59_29675 1ec3617d92ec746217f310041f551fe0 622 SMART SM00448 495 608 1.3E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_18185 e8035a0f43ae02d0cd67f1f061ac44c9 346 SUPERFAMILY SSF56935 20 345 5.49E-52 T 14-10-2018 JV59_18185 e8035a0f43ae02d0cd67f1f061ac44c9 346 PRINTS PR00183 E.coli/Salmonella-type porin signature 147 169 4.9E-8 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 JV59_18185 e8035a0f43ae02d0cd67f1f061ac44c9 346 PRINTS PR00183 E.coli/Salmonella-type porin signature 20 36 4.9E-8 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 JV59_18185 e8035a0f43ae02d0cd67f1f061ac44c9 346 PRINTS PR00183 E.coli/Salmonella-type porin signature 232 249 4.9E-8 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 JV59_18185 e8035a0f43ae02d0cd67f1f061ac44c9 346 PRINTS PR00183 E.coli/Salmonella-type porin signature 91 113 4.9E-8 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 JV59_18185 e8035a0f43ae02d0cd67f1f061ac44c9 346 PRINTS PR00183 E.coli/Salmonella-type porin signature 260 279 4.9E-8 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 JV59_18185 e8035a0f43ae02d0cd67f1f061ac44c9 346 Pfam PF00267 Gram-negative porin 36 344 2.0E-15 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 JV59_18185 e8035a0f43ae02d0cd67f1f061ac44c9 346 Gene3D G3DSA:2.40.160.10 20 346 4.1E-54 T 14-10-2018 IPR023614 Porin domain superfamily JV59_38450 57b65217da4b2c1b15b8a02a9d696b26 348 Gene3D G3DSA:3.90.78.10 223 348 7.1E-47 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JV59_38450 57b65217da4b2c1b15b8a02a9d696b26 348 Gene3D G3DSA:3.30.43.10 1 71 2.4E-18 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 JV59_38450 57b65217da4b2c1b15b8a02a9d696b26 348 Gene3D G3DSA:3.30.465.10 73 222 6.0E-53 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JV59_38450 57b65217da4b2c1b15b8a02a9d696b26 348 Pfam PF01565 FAD binding domain 23 143 6.9E-18 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 JV59_38450 57b65217da4b2c1b15b8a02a9d696b26 348 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 12 333 3.7E-96 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JV59_38450 57b65217da4b2c1b15b8a02a9d696b26 348 SUPERFAMILY SSF56194 206 341 1.18E-50 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JV59_38450 57b65217da4b2c1b15b8a02a9d696b26 348 SUPERFAMILY SSF56176 8 200 7.63E-37 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JV59_38450 57b65217da4b2c1b15b8a02a9d696b26 348 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 209 332 1.3E-34 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JV59_38450 57b65217da4b2c1b15b8a02a9d696b26 348 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 348 81.941 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JV59_30520 491d84c676406ab25d3c0b76f379ff12 206 SUPERFAMILY SSF110849 49 178 1.74E-15 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily JV59_30520 491d84c676406ab25d3c0b76f379ff12 206 Pfam PF02195 ParB-like nuclease domain 53 145 4.6E-11 T 14-10-2018 IPR003115 ParB/Sulfiredoxin JV59_30520 491d84c676406ab25d3c0b76f379ff12 206 Gene3D G3DSA:3.90.1530.10 44 128 4.7E-6 T 14-10-2018 JV59_30520 491d84c676406ab25d3c0b76f379ff12 206 SMART SM00470 50 145 1.1E-6 T 14-10-2018 IPR003115 ParB/Sulfiredoxin JV59_19820 f361c4078f0bbc40e600297a806f4bbe 444 SMART SM00304 173 228 6.8E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_19820 f361c4078f0bbc40e600297a806f4bbe 444 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 290 1.6E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_19820 f361c4078f0bbc40e600297a806f4bbe 444 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 443 9.1E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_19820 f361c4078f0bbc40e600297a806f4bbe 444 Pfam PF16750 Sensor domain of 2-component histidine kinase 37 144 1.9E-28 T 14-10-2018 IPR031930 2-component histidine kinase, sensor domain JV59_19820 f361c4078f0bbc40e600297a806f4bbe 444 SMART SM00387 335 444 6.4E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_19820 f361c4078f0bbc40e600297a806f4bbe 444 Gene3D G3DSA:1.10.287.130 177 288 2.2E-23 T 14-10-2018 JV59_19820 f361c4078f0bbc40e600297a806f4bbe 444 Gene3D G3DSA:3.30.565.10 289 444 9.3E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_19820 f361c4078f0bbc40e600297a806f4bbe 444 Gene3D G3DSA:3.30.450.170 26 145 8.2E-25 T 14-10-2018 IPR038428 2-component histidine kinase, sensor domain superfamily JV59_19820 f361c4078f0bbc40e600297a806f4bbe 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 400 1.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_19820 f361c4078f0bbc40e600297a806f4bbe 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 1.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_19820 f361c4078f0bbc40e600297a806f4bbe 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 424 1.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_19820 f361c4078f0bbc40e600297a806f4bbe 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 443 1.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_19820 f361c4078f0bbc40e600297a806f4bbe 444 SUPERFAMILY SSF47384 213 291 2.75E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_19820 f361c4078f0bbc40e600297a806f4bbe 444 SUPERFAMILY SSF55874 281 443 4.98E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_19820 f361c4078f0bbc40e600297a806f4bbe 444 SMART SM00388 229 291 4.9E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_19820 f361c4078f0bbc40e600297a806f4bbe 444 SUPERFAMILY SSF158472 173 225 4.84E-7 T 14-10-2018 JV59_19820 f361c4078f0bbc40e600297a806f4bbe 444 Pfam PF00672 HAMP domain 173 222 2.4E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_31400 071eb23be3f04c0bc8a8f58135d639ee 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 506 1.6E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_31400 071eb23be3f04c0bc8a8f58135d639ee 543 Gene3D G3DSA:1.10.287.950 211 543 6.7E-73 T 14-10-2018 JV59_31400 071eb23be3f04c0bc8a8f58135d639ee 543 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 168 2.4E-20 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain JV59_31400 071eb23be3f04c0bc8a8f58135d639ee 543 SMART SM00304 211 265 4.5E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_31400 071eb23be3f04c0bc8a8f58135d639ee 543 SUPERFAMILY SSF58104 238 542 1.96E-73 T 14-10-2018 JV59_31400 071eb23be3f04c0bc8a8f58135d639ee 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 8.3E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_31400 071eb23be3f04c0bc8a8f58135d639ee 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 378 405 8.3E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_31400 071eb23be3f04c0bc8a8f58135d639ee 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 8.3E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_31400 071eb23be3f04c0bc8a8f58135d639ee 543 SMART SM00283 280 541 4.7E-70 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_32420 e576d24d6d5805fbdb590a97918f2c08 396 Gene3D G3DSA:3.30.160.390 1 95 1.5E-17 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily JV59_32420 e576d24d6d5805fbdb590a97918f2c08 396 SUPERFAMILY SSF56349 95 373 1.18E-49 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JV59_32420 e576d24d6d5805fbdb590a97918f2c08 396 Gene3D G3DSA:1.10.150.130 96 196 3.8E-12 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal JV59_32420 e576d24d6d5805fbdb590a97918f2c08 396 Gene3D G3DSA:1.10.443.10 202 379 3.8E-15 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JV59_32420 e576d24d6d5805fbdb590a97918f2c08 396 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 96 150 8.9E-5 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 JV59_32420 e576d24d6d5805fbdb590a97918f2c08 396 Pfam PF13356 Arm DNA-binding domain 3 85 1.5E-10 T 14-10-2018 IPR025166 Integrase, DNA-binding domain JV59_32420 e576d24d6d5805fbdb590a97918f2c08 396 Pfam PF00589 Phage integrase family 203 365 3.4E-17 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JV59_20465 bc6867a41d6e7efd18ffb0ec952c06e7 641 SUPERFAMILY SSF51445 12 560 6.09E-118 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_20465 bc6867a41d6e7efd18ffb0ec952c06e7 641 Gene3D G3DSA:3.20.20.80 99 557 5.3E-195 T 14-10-2018 JV59_20465 bc6867a41d6e7efd18ffb0ec952c06e7 641 Gene3D G3DSA:2.60.40.1180 567 640 2.4E-16 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta JV59_20465 bc6867a41d6e7efd18ffb0ec952c06e7 641 SMART SM00642 101 553 4.3E-33 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_20465 bc6867a41d6e7efd18ffb0ec952c06e7 641 Gene3D G3DSA:3.90.400.10 186 261 5.3E-195 T 14-10-2018 JV59_20465 bc6867a41d6e7efd18ffb0ec952c06e7 641 Pfam PF00128 Alpha amylase, catalytic domain 109 346 2.5E-39 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_20465 bc6867a41d6e7efd18ffb0ec952c06e7 641 Gene3D G3DSA:1.10.1740.10 3 96 1.7E-20 T 14-10-2018 JV59_20465 bc6867a41d6e7efd18ffb0ec952c06e7 641 SUPERFAMILY SSF51011 569 639 1.03E-6 T 14-10-2018 JV59_36210 8af6eb3592eec59461144625794fb3ea 184 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 110 8.1E-12 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like JV59_36210 8af6eb3592eec59461144625794fb3ea 184 SUPERFAMILY SSF110857 2 125 5.76E-16 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily JV59_36210 8af6eb3592eec59461144625794fb3ea 184 Gene3D G3DSA:3.10.490.10 1 148 5.9E-9 T 14-10-2018 JV59_34625 98343e02a40b1de9b4dd20c1e55b311f 204 SUPERFAMILY SSF101327 25 144 4.18E-5 T 14-10-2018 IPR036255 YgfB-like superfamily JV59_34625 98343e02a40b1de9b4dd20c1e55b311f 204 Gene3D G3DSA:3.10.450.50 154 204 2.3E-9 T 14-10-2018 JV59_34625 98343e02a40b1de9b4dd20c1e55b311f 204 SUPERFAMILY SSF103642 184 203 1.64E-7 T 14-10-2018 JV59_34625 98343e02a40b1de9b4dd20c1e55b311f 204 Pfam PF03695 Uncharacterised protein family (UPF0149) 9 151 6.2E-6 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 JV59_34625 98343e02a40b1de9b4dd20c1e55b311f 204 Pfam PF02810 SEC-C motif 186 204 3.5E-10 T 14-10-2018 IPR004027 SEC-C motif JV59_26925 fab494169084ac7fc1cfac06e205b379 104 SUPERFAMILY SSF46626 6 104 5.44E-23 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_26925 fab494169084ac7fc1cfac06e205b379 104 Gene3D G3DSA:1.10.760.10 22 104 1.7E-26 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_26925 fab494169084ac7fc1cfac06e205b379 104 Pfam PF00034 Cytochrome c 27 104 4.2E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_34395 9500abe16479a909a1bb2e202a92dbd6 353 Gene3D G3DSA:3.90.226.10 109 305 1.1E-43 T 14-10-2018 JV59_34395 9500abe16479a909a1bb2e202a92dbd6 353 Pfam PF01343 Peptidase family S49 166 314 1.2E-45 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 JV59_34395 9500abe16479a909a1bb2e202a92dbd6 353 Gene3D G3DSA:3.40.1750.20 206 270 1.1E-43 T 14-10-2018 JV59_34395 9500abe16479a909a1bb2e202a92dbd6 353 SUPERFAMILY SSF52096 103 303 4.98E-29 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JV59_34395 9500abe16479a909a1bb2e202a92dbd6 353 Pfam PF08496 Peptidase family S49 N-terminal 2 162 9.1E-57 T 14-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 JV59_38980 6e60cb59f8a3f2e12bde54e18f930da9 334 Pfam PF00962 Adenosine/AMP deaminase 5 329 1.3E-88 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 JV59_38980 6e60cb59f8a3f2e12bde54e18f930da9 334 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 7 330 8.5E-121 T 14-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 JV59_38980 6e60cb59f8a3f2e12bde54e18f930da9 334 Gene3D G3DSA:3.20.20.140 1 334 6.2E-96 T 14-10-2018 JV59_38980 6e60cb59f8a3f2e12bde54e18f930da9 334 SUPERFAMILY SSF51556 4 333 3.48E-74 T 14-10-2018 IPR032466 Metal-dependent hydrolase JV59_38980 6e60cb59f8a3f2e12bde54e18f930da9 334 Hamap MF_00540 Adenosine deaminase [add]. 1 331 54.501 T 14-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 JV59_27680 0a041e82f77e39c826b95d3c81222f11 243 SUPERFAMILY SSF117143 77 176 1.44E-11 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like JV59_27680 0a041e82f77e39c826b95d3c81222f11 243 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 5.5E-30 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G JV59_27680 0a041e82f77e39c826b95d3c81222f11 243 Pfam PF00460 Flagella basal body rod protein 7 35 1.3E-5 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 JV59_27680 0a041e82f77e39c826b95d3c81222f11 243 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 167 239 7.6E-17 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JV59_37895 1980d512e28659f076b3c137994df36a 274 SUPERFAMILY SSF50249 2 125 1.37E-49 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_37895 1980d512e28659f076b3c137994df36a 274 Gene3D G3DSA:2.40.50.140 1 114 2.0E-50 T 14-10-2018 JV59_37895 1980d512e28659f076b3c137994df36a 274 SUPERFAMILY SSF50104 127 272 1.5E-61 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily JV59_37895 1980d512e28659f076b3c137994df36a 274 Gene3D G3DSA:2.30.30.30 115 195 4.9E-33 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 JV59_37895 1980d512e28659f076b3c137994df36a 274 PIRSF PIRSF002158 13 274 2.1E-101 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_37895 1980d512e28659f076b3c137994df36a 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 7.1E-33 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_37895 1980d512e28659f076b3c137994df36a 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 2.0E-56 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 JV59_37895 1980d512e28659f076b3c137994df36a 274 SMART SM01382 124 252 1.0E-92 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 JV59_37895 1980d512e28659f076b3c137994df36a 274 Gene3D G3DSA:4.10.950.10 196 274 7.5E-37 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37895 1980d512e28659f076b3c137994df36a 274 SMART SM01383 42 118 1.3E-44 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_37895 1980d512e28659f076b3c137994df36a 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.704 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 JV59_37895 1980d512e28659f076b3c137994df36a 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 7.3E-132 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 JV59_37895 1980d512e28659f076b3c137994df36a 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_38120 201a327142d5ee57b322eff57ad652fc 596 Pfam PF13899 Thioredoxin-like 486 565 7.1E-14 T 14-10-2018 JV59_38120 201a327142d5ee57b322eff57ad652fc 596 SUPERFAMILY SSF52833 483 592 1.49E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_38120 201a327142d5ee57b322eff57ad652fc 596 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 595 38.417 T 14-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 JV59_38120 201a327142d5ee57b322eff57ad652fc 596 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 204 404 3.1E-17 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 JV59_38120 201a327142d5ee57b322eff57ad652fc 596 Pfam PF11412 Disulphide bond corrector protein DsbC 37 147 7.8E-29 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain JV59_38120 201a327142d5ee57b322eff57ad652fc 596 ProSitePatterns PS00194 Thioredoxin family active site. 503 521 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 JV59_38120 201a327142d5ee57b322eff57ad652fc 596 Gene3D G3DSA:3.40.30.10 468 595 1.5E-33 T 14-10-2018 JV59_38120 201a327142d5ee57b322eff57ad652fc 596 Gene3D G3DSA:2.60.40.1250 31 163 4.1E-38 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily JV59_38120 201a327142d5ee57b322eff57ad652fc 596 SUPERFAMILY SSF74863 35 148 2.75E-39 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily JV59_35865 25887e5ab0438032356a5faa6be7f904 298 Gene3D G3DSA:1.10.10.10 5 97 1.9E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_35865 25887e5ab0438032356a5faa6be7f904 298 SUPERFAMILY SSF53850 92 294 2.9E-27 T 14-10-2018 JV59_35865 25887e5ab0438032356a5faa6be7f904 298 Gene3D G3DSA:3.40.190.10 161 268 2.8E-48 T 14-10-2018 JV59_35865 25887e5ab0438032356a5faa6be7f904 298 SUPERFAMILY SSF46785 8 112 3.56E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_35865 25887e5ab0438032356a5faa6be7f904 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 64 1.0E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_35865 25887e5ab0438032356a5faa6be7f904 298 Pfam PF03466 LysR substrate binding domain 91 293 3.2E-26 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_35865 25887e5ab0438032356a5faa6be7f904 298 Gene3D G3DSA:3.40.190.10 101 291 2.8E-48 T 14-10-2018 JV59_18150 26ff87391601e8e55f241053ecc24df3 151 SMART SM00344 1 110 9.4E-45 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 JV59_18150 26ff87391601e8e55f241053ecc24df3 151 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 2.5E-22 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JV59_18150 26ff87391601e8e55f241053ecc24df3 151 Gene3D G3DSA:1.10.10.10 1 54 4.3E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_18150 26ff87391601e8e55f241053ecc24df3 151 SUPERFAMILY SSF46785 1 60 5.54E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_18150 26ff87391601e8e55f241053ecc24df3 151 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 2.4E-18 T 14-10-2018 JV59_18150 26ff87391601e8e55f241053ecc24df3 151 SUPERFAMILY SSF54909 62 149 1.74E-22 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_18150 26ff87391601e8e55f241053ecc24df3 151 Gene3D G3DSA:3.30.70.920 55 137 9.1E-25 T 14-10-2018 JV59_18150 26ff87391601e8e55f241053ecc24df3 151 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site JV59_18150 26ff87391601e8e55f241053ecc24df3 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.1E-18 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_18150 26ff87391601e8e55f241053ecc24df3 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.1E-18 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_18150 26ff87391601e8e55f241053ecc24df3 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.1E-18 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_29735 3887a14b241f53af2b57142dc968d075 426 PIRSF PIRSF006066 1 426 5.2E-147 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 JV59_29735 3887a14b241f53af2b57142dc968d075 426 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 2.5E-128 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 JV59_29735 3887a14b241f53af2b57142dc968d075 426 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 417 2.3E-113 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit JV59_38780 6c80d9444083f3cf4d0c164c673bfd31 90 Pfam PF01192 RNA polymerase Rpb6 10 60 7.1E-17 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 JV59_38780 6c80d9444083f3cf4d0c164c673bfd31 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.1E-28 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_38780 6c80d9444083f3cf4d0c164c673bfd31 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.368 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_38780 6c80d9444083f3cf4d0c164c673bfd31 90 Gene3D G3DSA:3.90.940.10 1 90 5.3E-29 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 JV59_38780 6c80d9444083f3cf4d0c164c673bfd31 90 SUPERFAMILY SSF63562 1 78 5.23E-25 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 JV59_38780 6c80d9444083f3cf4d0c164c673bfd31 90 SMART SM01409 8 61 2.5E-16 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 JV59_30260 91134cdf70dac6f078d4ac58e024022f 377 SUPERFAMILY SSF51419 14 242 4.58E-41 T 14-10-2018 IPR029066 PLP-binding barrel JV59_30260 91134cdf70dac6f078d4ac58e024022f 377 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 243 327 8.8E-5 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 JV59_30260 91134cdf70dac6f078d4ac58e024022f 377 PIRSF PIRSF038941 1 372 9.8E-126 T 14-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 JV59_30260 91134cdf70dac6f078d4ac58e024022f 377 Gene3D G3DSA:2.40.37.10 7 372 2.4E-140 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 JV59_30260 91134cdf70dac6f078d4ac58e024022f 377 SUPERFAMILY SSF50621 212 359 1.38E-23 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 JV59_30260 91134cdf70dac6f078d4ac58e024022f 377 Gene3D G3DSA:3.20.20.10 15 242 2.4E-140 T 14-10-2018 IPR029066 PLP-binding barrel JV59_30260 91134cdf70dac6f078d4ac58e024022f 377 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 370 3.8E-160 T 14-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 JV59_23300 e2af74467d3cd60a617b408b0a2f0351 315 SUPERFAMILY SSF161098 47 314 2.43E-61 T 14-10-2018 IPR035906 MetI-like superfamily JV59_23300 e2af74467d3cd60a617b408b0a2f0351 315 Gene3D G3DSA:1.10.3720.10 37 305 6.1E-57 T 14-10-2018 IPR035906 MetI-like superfamily JV59_23300 e2af74467d3cd60a617b408b0a2f0351 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 134 302 8.1E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_22615 01509f9c469428aa094d739dc3b29684 187 Pfam PF04115 Ureidoglycolate lyase 6 163 3.3E-54 T 14-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 JV59_22615 01509f9c469428aa094d739dc3b29684 187 Gene3D G3DSA:2.60.120.480 5 171 1.1E-60 T 14-10-2018 IPR024060 Ureidoglycolate lyase domain superfamily GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 JV59_22615 01509f9c469428aa094d739dc3b29684 187 PIRSF PIRSF017306 6 165 1.4E-50 T 14-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 JV59_22615 01509f9c469428aa094d739dc3b29684 187 SUPERFAMILY SSF51182 6 163 4.4E-57 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JV59_22615 01509f9c469428aa094d739dc3b29684 187 Hamap MF_00616 Ureidoglycolate lyase [allA]. 6 167 39.107 T 14-10-2018 IPR023525 Ureidoglycolate lyase, bacterial GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 JV59_16030 321360fa9e0e8816c2630986a4548b4e 202 Pfam PF01810 LysE type translocator 16 199 7.6E-28 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_16030 321360fa9e0e8816c2630986a4548b4e 202 PIRSF PIRSF006324 1 202 1.9E-50 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_32440 74da95c927c23106eca31db908697ab5 295 Gene3D G3DSA:3.40.140.10 29 180 1.6E-44 T 14-10-2018 JV59_32440 74da95c927c23106eca31db908697ab5 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 1.8E-40 T 14-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 JV59_32440 74da95c927c23106eca31db908697ab5 295 PIRSF PIRSF006334 14 295 1.8E-105 T 14-10-2018 JV59_32440 74da95c927c23106eca31db908697ab5 295 SUPERFAMILY SSF53927 152 290 6.67E-34 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 JV59_32440 74da95c927c23106eca31db908697ab5 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 294 9.0E-96 T 14-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 JV59_32440 74da95c927c23106eca31db908697ab5 295 Gene3D G3DSA:3.40.140.10 181 295 4.5E-25 T 14-10-2018 JV59_32440 74da95c927c23106eca31db908697ab5 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 48.456 T 14-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 JV59_32440 74da95c927c23106eca31db908697ab5 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 JV59_32440 74da95c927c23106eca31db908697ab5 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 60 141 3.9E-12 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain JV59_32440 74da95c927c23106eca31db908697ab5 295 SUPERFAMILY SSF53927 1 147 3.35E-40 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 JV59_22985 cf197a82e925ef1badc228bdd6e24b14 604 SUPERFAMILY SSF49785 368 601 9.35E-53 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily JV59_22985 cf197a82e925ef1badc228bdd6e24b14 604 Gene3D G3DSA:3.40.50.1820 7 347 8.9E-88 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_22985 cf197a82e925ef1badc228bdd6e24b14 604 SUPERFAMILY SSF53474 4 347 4.64E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_22985 cf197a82e925ef1badc228bdd6e24b14 604 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 340 597 9.1E-49 T 14-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 JV59_22985 cf197a82e925ef1badc228bdd6e24b14 604 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 13 292 1.1E-59 T 14-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 JV59_22985 cf197a82e925ef1badc228bdd6e24b14 604 SMART SM00939 323 598 5.7E-62 T 14-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 JV59_22985 cf197a82e925ef1badc228bdd6e24b14 604 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 10 603 1.8E-101 T 14-10-2018 IPR005674 CocE/Serine esterase GO:0016787 JV59_22985 cf197a82e925ef1badc228bdd6e24b14 604 Gene3D G3DSA:2.60.120.260 362 601 9.0E-68 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily JV59_22985 cf197a82e925ef1badc228bdd6e24b14 604 Gene3D G3DSA:1.10.3020.10 151 239 8.9E-88 T 14-10-2018 JV59_21010 395fac77ce95be1d5f6a06a0c76b6fc7 229 SUPERFAMILY SSF50475 11 199 3.58E-29 T 14-10-2018 JV59_21010 395fac77ce95be1d5f6a06a0c76b6fc7 229 Pfam PF01613 Flavin reductase like domain 35 167 1.7E-10 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 JV59_21010 395fac77ce95be1d5f6a06a0c76b6fc7 229 Gene3D G3DSA:2.30.110.10 7 207 5.8E-40 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JV59_36075 df9c544f0348c0386bc33f562d0f3fe8 703 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 7.1E-145 T 14-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 JV59_36075 df9c544f0348c0386bc33f562d0f3fe8 703 Gene3D G3DSA:3.30.870.10 500 686 3.8E-73 T 14-10-2018 JV59_36075 df9c544f0348c0386bc33f562d0f3fe8 703 SUPERFAMILY SSF56024 315 498 4.71E-55 T 14-10-2018 JV59_36075 df9c544f0348c0386bc33f562d0f3fe8 703 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 27.562 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 JV59_36075 df9c544f0348c0386bc33f562d0f3fe8 703 SUPERFAMILY SSF143724 107 313 2.75E-65 T 14-10-2018 JV59_36075 df9c544f0348c0386bc33f562d0f3fe8 703 Gene3D G3DSA:3.30.870.10 320 499 1.3E-72 T 14-10-2018 JV59_36075 df9c544f0348c0386bc33f562d0f3fe8 703 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 4.0E-265 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 JV59_36075 df9c544f0348c0386bc33f562d0f3fe8 703 SUPERFAMILY SSF56024 500 684 2.13E-69 T 14-10-2018 JV59_36075 df9c544f0348c0386bc33f562d0f3fe8 703 Gene3D G3DSA:1.20.58.310 9 109 2.6E-36 T 14-10-2018 JV59_36075 df9c544f0348c0386bc33f562d0f3fe8 703 Pfam PF02503 Polyphosphate kinase middle domain 119 320 9.6E-49 T 14-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 JV59_36075 df9c544f0348c0386bc33f562d0f3fe8 703 PIRSF PIRSF015589 1 694 9.9E-254 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 JV59_36075 df9c544f0348c0386bc33f562d0f3fe8 703 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 4.3E-31 T 14-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 JV59_36075 df9c544f0348c0386bc33f562d0f3fe8 703 SUPERFAMILY SSF140356 4 104 3.92E-32 T 14-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 JV59_36075 df9c544f0348c0386bc33f562d0f3fe8 703 Gene3D G3DSA:3.30.1840.10 110 307 8.4E-78 T 14-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 JV59_22285 7ded9d509275fb0e884ea4d8e1087ae8 646 SUPERFAMILY SSF52794 171 267 8.55E-31 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 JV59_22285 7ded9d509275fb0e884ea4d8e1087ae8 646 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 290 627 6.0E-81 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 JV59_22285 7ded9d509275fb0e884ea4d8e1087ae8 646 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 172 256 1.9E-24 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 JV59_22285 7ded9d509275fb0e884ea4d8e1087ae8 646 Gene3D G3DSA:3.40.930.10 1 157 6.5E-37 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 JV59_22285 7ded9d509275fb0e884ea4d8e1087ae8 646 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 134 8.2E-38 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 JV59_22285 7ded9d509275fb0e884ea4d8e1087ae8 646 Gene3D G3DSA:3.40.50.2300 159 271 3.0E-35 T 14-10-2018 JV59_22285 7ded9d509275fb0e884ea4d8e1087ae8 646 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain JV59_22285 7ded9d509275fb0e884ea4d8e1087ae8 646 SUPERFAMILY SSF55804 1 149 1.15E-34 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 JV59_22285 7ded9d509275fb0e884ea4d8e1087ae8 646 Pfam PF02378 Phosphotransferase system, EIIC 299 528 4.2E-9 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 JV59_22285 7ded9d509275fb0e884ea4d8e1087ae8 646 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 148 1.0E-36 T 14-10-2018 IPR002178 PTS EIIA type-2 domain JV59_22285 7ded9d509275fb0e884ea4d8e1087ae8 646 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 173 263 2.9E-15 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 JV59_16845 e0f415e4a3eecfe7cc25f172fdcf6a85 1016 SUPERFAMILY SSF56801 5 522 3.92E-118 T 14-10-2018 JV59_16845 e0f415e4a3eecfe7cc25f172fdcf6a85 1016 Gene3D G3DSA:3.40.50.12780 6 398 7.7E-99 T 14-10-2018 JV59_16845 e0f415e4a3eecfe7cc25f172fdcf6a85 1016 Gene3D G3DSA:1.10.1200.10 501 577 1.2E-20 T 14-10-2018 IPR036736 ACP-like superfamily JV59_16845 e0f415e4a3eecfe7cc25f172fdcf6a85 1016 SUPERFAMILY SSF52777 598 794 4.22E-18 T 14-10-2018 JV59_16845 e0f415e4a3eecfe7cc25f172fdcf6a85 1016 Gene3D G3DSA:3.30.300.30 400 498 2.8E-24 T 14-10-2018 JV59_16845 e0f415e4a3eecfe7cc25f172fdcf6a85 1016 Gene3D G3DSA:3.30.559.30 779 1012 1.1E-52 T 14-10-2018 JV59_16845 e0f415e4a3eecfe7cc25f172fdcf6a85 1016 ProSitePatterns PS00012 Phosphopantetheine attachment site. 534 549 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site JV59_16845 e0f415e4a3eecfe7cc25f172fdcf6a85 1016 Pfam PF00550 Phosphopantetheine attachment site 512 574 4.7E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain JV59_16845 e0f415e4a3eecfe7cc25f172fdcf6a85 1016 Pfam PF00501 AMP-binding enzyme 18 405 4.2E-77 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JV59_16845 e0f415e4a3eecfe7cc25f172fdcf6a85 1016 SUPERFAMILY SSF47336 505 575 7.98E-17 T 14-10-2018 IPR036736 ACP-like superfamily JV59_16845 e0f415e4a3eecfe7cc25f172fdcf6a85 1016 Gene3D G3DSA:3.30.559.10 601 966 1.1E-52 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JV59_16845 e0f415e4a3eecfe7cc25f172fdcf6a85 1016 SUPERFAMILY SSF52777 783 1012 1.67E-32 T 14-10-2018 JV59_16845 e0f415e4a3eecfe7cc25f172fdcf6a85 1016 Pfam PF00668 Condensation domain 598 1014 3.5E-42 T 14-10-2018 IPR001242 Condensation domain JV59_16845 e0f415e4a3eecfe7cc25f172fdcf6a85 1016 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 32 430 8.4E-100 T 14-10-2018 IPR010071 Amino acid adenylation domain JV59_25995 0fbc5181607badb8747f538c203b0233 142 SMART SM00649 9 141 1.8E-82 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 JV59_25995 0fbc5181607badb8747f538c203b0233 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 4.2E-23 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 JV59_25995 0fbc5181607badb8747f538c203b0233 142 Gene3D G3DSA:3.30.1550.10 2 72 4.0E-34 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily JV59_25995 0fbc5181607badb8747f538c203b0233 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.534 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 JV59_25995 0fbc5181607badb8747f538c203b0233 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 14-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_25995 0fbc5181607badb8747f538c203b0233 142 Gene3D G3DSA:1.10.10.250 73 141 2.2E-25 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily JV59_25995 0fbc5181607badb8747f538c203b0233 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.1E-29 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal JV59_25995 0fbc5181607badb8747f538c203b0233 142 SUPERFAMILY SSF54747 3 73 4.84E-30 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily JV59_25995 0fbc5181607badb8747f538c203b0233 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 71 4.0E-14 T 14-10-2018 JV59_25995 0fbc5181607badb8747f538c203b0233 142 SUPERFAMILY SSF46906 68 141 5.23E-25 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily JV59_25995 0fbc5181607badb8747f538c203b0233 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 7.1E-64 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_36320 353201a04e7fdd822ff5905e9047bc93 338 Gene3D G3DSA:1.25.40.10 180 337 1.0E-26 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_36320 353201a04e7fdd822ff5905e9047bc93 338 Gene3D G3DSA:1.25.40.10 46 177 3.1E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_36320 353201a04e7fdd822ff5905e9047bc93 338 SUPERFAMILY SSF48452 51 324 4.78E-28 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_36320 353201a04e7fdd822ff5905e9047bc93 338 Pfam PF13181 Tetratricopeptide repeat 85 117 0.0054 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_36320 353201a04e7fdd822ff5905e9047bc93 338 Pfam PF13181 Tetratricopeptide repeat 182 212 0.0052 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_36320 353201a04e7fdd822ff5905e9047bc93 338 Pfam PF13181 Tetratricopeptide repeat 279 306 0.018 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_36320 353201a04e7fdd822ff5905e9047bc93 338 Pfam PF13181 Tetratricopeptide repeat 119 148 0.047 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_36320 353201a04e7fdd822ff5905e9047bc93 338 SMART SM00028 214 247 0.11 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_36320 353201a04e7fdd822ff5905e9047bc93 338 SMART SM00028 278 311 0.019 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_36320 353201a04e7fdd822ff5905e9047bc93 338 SMART SM00028 180 213 4.9 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_36320 353201a04e7fdd822ff5905e9047bc93 338 SMART SM00028 84 117 0.012 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_36320 353201a04e7fdd822ff5905e9047bc93 338 SMART SM00028 118 151 260.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_36320 353201a04e7fdd822ff5905e9047bc93 338 Pfam PF13432 Tetratricopeptide repeat 221 268 0.014 T 14-10-2018 JV59_36450 eaea6e0d4122a202f42c9df9483be4de 404 Gene3D G3DSA:3.40.640.10 16 262 2.6E-168 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_36450 eaea6e0d4122a202f42c9df9483be4de 404 SUPERFAMILY SSF53383 5 391 2.13E-116 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_36450 eaea6e0d4122a202f42c9df9483be4de 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 8.9E-229 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 JV59_36450 eaea6e0d4122a202f42c9df9483be4de 404 PIRSF PIRSF005572 2 384 2.2E-137 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 JV59_36450 eaea6e0d4122a202f42c9df9483be4de 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.377 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 JV59_36450 eaea6e0d4122a202f42c9df9483be4de 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site JV59_36450 eaea6e0d4122a202f42c9df9483be4de 404 Gene3D G3DSA:3.90.1150.10 5 376 2.6E-168 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_36450 eaea6e0d4122a202f42c9df9483be4de 404 Pfam PF00266 Aminotransferase class-V 5 368 2.3E-89 T 14-10-2018 IPR000192 Aminotransferase class V domain JV59_18640 bcf9fec08c86ed27ff8fdadd5141134e 1013 Gene3D G3DSA:3.40.50.300 702 1011 5.4E-25 T 14-10-2018 JV59_18640 bcf9fec08c86ed27ff8fdadd5141134e 1013 SUPERFAMILY SSF52540 17 993 1.2E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_18640 bcf9fec08c86ed27ff8fdadd5141134e 1013 Pfam PF13476 AAA domain 5 269 1.1E-15 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain JV59_18640 bcf9fec08c86ed27ff8fdadd5141134e 1013 Pfam PF13558 Putative exonuclease SbcCD, C subunit 910 970 2.0E-11 T 14-10-2018 JV59_18640 bcf9fec08c86ed27ff8fdadd5141134e 1013 Gene3D G3DSA:3.40.50.300 1 208 8.4E-41 T 14-10-2018 JV59_22545 252ecf305f5016a9c1097d22cb3bfd39 71 TIGRFAM TIGR02450 TIGR02450: tryptophan-rich conserved hypothetical protein 10 71 1.6E-18 T 14-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich JV59_22545 252ecf305f5016a9c1097d22cb3bfd39 71 Pfam PF09493 Tryptophan-rich protein (DUF2389) 12 71 6.2E-21 T 14-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich JV59_25535 13d390b694918483f3ee55f99c5c5cb7 559 Pfam PF00672 HAMP domain 231 278 1.6E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_25535 13d390b694918483f3ee55f99c5c5cb7 559 Gene3D G3DSA:3.30.450.20 41 185 4.2E-51 T 14-10-2018 JV59_25535 13d390b694918483f3ee55f99c5c5cb7 559 SMART SM00283 297 558 4.7E-57 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_25535 13d390b694918483f3ee55f99c5c5cb7 559 Pfam PF17200 Single Cache domain 2 50 194 9.8E-40 T 14-10-2018 IPR033480 Single Cache domain 2 JV59_25535 13d390b694918483f3ee55f99c5c5cb7 559 SUPERFAMILY SSF58104 250 559 1.31E-70 T 14-10-2018 JV59_25535 13d390b694918483f3ee55f99c5c5cb7 559 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 361 525 1.5E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_25535 13d390b694918483f3ee55f99c5c5cb7 559 Gene3D G3DSA:1.10.287.950 229 559 2.7E-67 T 14-10-2018 JV59_25535 13d390b694918483f3ee55f99c5c5cb7 559 SMART SM01049 46 135 5.6E-32 T 14-10-2018 IPR033480 Single Cache domain 2 JV59_25535 13d390b694918483f3ee55f99c5c5cb7 559 SMART SM00304 228 282 5.3E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_38150 55905678f13b7c52cbc4cd5297909436 1142 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 2.5E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_38150 55905678f13b7c52cbc4cd5297909436 1142 SMART SM00387 897 1006 6.9E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_38150 55905678f13b7c52cbc4cd5297909436 1142 SUPERFAMILY SSF47384 773 854 9.22E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_38150 55905678f13b7c52cbc4cd5297909436 1142 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 947 7.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_38150 55905678f13b7c52cbc4cd5297909436 1142 PRINTS PR00344 Bacterial sensor protein C-terminal signature 990 1003 7.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_38150 55905678f13b7c52cbc4cd5297909436 1142 PRINTS PR00344 Bacterial sensor protein C-terminal signature 966 984 7.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_38150 55905678f13b7c52cbc4cd5297909436 1142 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 961 7.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_38150 55905678f13b7c52cbc4cd5297909436 1142 SUPERFAMILY SSF55785 626 741 2.93E-8 T 14-10-2018 IPR035965 PAS domain superfamily JV59_38150 55905678f13b7c52cbc4cd5297909436 1142 SMART SM00388 788 853 4.1E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_38150 55905678f13b7c52cbc4cd5297909436 1142 Gene3D G3DSA:1.10.287.130 748 851 4.6E-15 T 14-10-2018 JV59_38150 55905678f13b7c52cbc4cd5297909436 1142 Pfam PF12860 PAS fold 634 748 1.8E-43 T 14-10-2018 JV59_38150 55905678f13b7c52cbc4cd5297909436 1142 SUPERFAMILY SSF55874 843 1002 1.44E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_38150 55905678f13b7c52cbc4cd5297909436 1142 Pfam PF00072 Response regulator receiver domain 1028 1139 6.3E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_38150 55905678f13b7c52cbc4cd5297909436 1142 Gene3D G3DSA:1.20.1730.10 33 512 9.4E-8 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily JV59_38150 55905678f13b7c52cbc4cd5297909436 1142 SMART SM00448 1026 1139 1.8E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_38150 55905678f13b7c52cbc4cd5297909436 1142 SUPERFAMILY SSF52172 1025 1142 5.12E-18 T 14-10-2018 IPR011006 CheY-like superfamily JV59_38150 55905678f13b7c52cbc4cd5297909436 1142 Gene3D G3DSA:3.40.50.2300 1022 1142 4.6E-16 T 14-10-2018 JV59_38150 55905678f13b7c52cbc4cd5297909436 1142 Gene3D G3DSA:3.30.450.20 616 747 4.2E-11 T 14-10-2018 JV59_38150 55905678f13b7c52cbc4cd5297909436 1142 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1003 4.7E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_38150 55905678f13b7c52cbc4cd5297909436 1142 Gene3D G3DSA:3.30.565.10 859 1010 4.0E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_31790 2689ec9cbbf66a564057f3bd0342949a 90 Gene3D G3DSA:3.30.70.100 1 90 5.1E-29 T 14-10-2018 JV59_31790 2689ec9cbbf66a564057f3bd0342949a 90 SUPERFAMILY SSF54975 4 89 3.27E-27 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 JV59_31790 2689ec9cbbf66a564057f3bd0342949a 90 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 JV59_31790 2689ec9cbbf66a564057f3bd0342949a 90 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 JV59_31790 2689ec9cbbf66a564057f3bd0342949a 90 Pfam PF00708 Acylphosphatase 7 89 4.5E-24 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 JV59_34990 bd8fd948afd893b5c582acf5af516714 493 Gene3D G3DSA:1.20.120.1380 259 464 6.4E-57 T 14-10-2018 JV59_34990 bd8fd948afd893b5c582acf5af516714 493 Gene3D G3DSA:3.40.50.300 275 461 6.4E-57 T 14-10-2018 JV59_34990 bd8fd948afd893b5c582acf5af516714 493 SUPERFAMILY SSF52540 276 468 4.15E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_34990 bd8fd948afd893b5c582acf5af516714 493 Pfam PF00448 SRP54-type protein, GTPase domain 282 470 6.3E-39 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JV59_34990 bd8fd948afd893b5c582acf5af516714 493 SMART SM00962 280 473 8.5E-64 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JV59_34990 bd8fd948afd893b5c582acf5af516714 493 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 368 4.4E-86 T 14-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 JV59_34990 bd8fd948afd893b5c582acf5af516714 493 SMART SM00382 279 465 1.1E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_29505 2f5405a55fa8fd99cec86fa94db98034 1049 SUPERFAMILY SSF82866 296 497 2.88E-33 T 14-10-2018 JV59_29505 2f5405a55fa8fd99cec86fa94db98034 1049 SUPERFAMILY SSF82693 138 332 1.15E-5 T 14-10-2018 JV59_29505 2f5405a55fa8fd99cec86fa94db98034 1049 Gene3D G3DSA:3.30.70.1430 43 831 5.0E-225 T 14-10-2018 JV59_29505 2f5405a55fa8fd99cec86fa94db98034 1049 Pfam PF00873 AcrB/AcrD/AcrF family 9 1038 5.8E-163 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29505 2f5405a55fa8fd99cec86fa94db98034 1049 Gene3D G3DSA:3.30.2090.10 179 270 5.0E-225 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_29505 2f5405a55fa8fd99cec86fa94db98034 1049 Gene3D G3DSA:3.30.70.1440 677 882 5.0E-225 T 14-10-2018 JV59_29505 2f5405a55fa8fd99cec86fa94db98034 1049 SUPERFAMILY SSF82714 185 265 2.49E-8 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_29505 2f5405a55fa8fd99cec86fa94db98034 1049 SUPERFAMILY SSF82866 824 1041 4.84E-44 T 14-10-2018 JV59_29505 2f5405a55fa8fd99cec86fa94db98034 1049 Gene3D G3DSA:1.20.1640.10 14 511 5.0E-225 T 14-10-2018 JV59_29505 2f5405a55fa8fd99cec86fa94db98034 1049 Gene3D G3DSA:3.30.70.1430 566 676 5.0E-225 T 14-10-2018 JV59_29505 2f5405a55fa8fd99cec86fa94db98034 1049 PRINTS PR00702 Acriflavin resistance protein family signature 41 59 3.5E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29505 2f5405a55fa8fd99cec86fa94db98034 1049 PRINTS PR00702 Acriflavin resistance protein family signature 13 37 3.5E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29505 2f5405a55fa8fd99cec86fa94db98034 1049 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 3.5E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29505 2f5405a55fa8fd99cec86fa94db98034 1049 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 3.5E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29505 2f5405a55fa8fd99cec86fa94db98034 1049 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 3.5E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29505 2f5405a55fa8fd99cec86fa94db98034 1049 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 3.5E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29505 2f5405a55fa8fd99cec86fa94db98034 1049 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 3.5E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29505 2f5405a55fa8fd99cec86fa94db98034 1049 Gene3D G3DSA:1.20.1640.10 512 1035 5.0E-225 T 14-10-2018 JV59_29505 2f5405a55fa8fd99cec86fa94db98034 1049 SUPERFAMILY SSF82693 44 137 5.93E-19 T 14-10-2018 JV59_29505 2f5405a55fa8fd99cec86fa94db98034 1049 Gene3D G3DSA:3.30.2090.10 726 823 5.0E-225 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_29505 2f5405a55fa8fd99cec86fa94db98034 1049 Gene3D G3DSA:3.30.70.1320 137 334 5.0E-225 T 14-10-2018 JV59_18125 8239b63584391600f2472695600f6dbc 481 Pfam PF05762 VWA domain containing CoxE-like protein 316 448 1.4E-10 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like JV59_18125 8239b63584391600f2472695600f6dbc 481 SMART SM00327 320 479 0.0013 T 14-10-2018 IPR002035 von Willebrand factor, type A JV59_18125 8239b63584391600f2472695600f6dbc 481 SUPERFAMILY SSF53300 319 475 9.34E-26 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JV59_18125 8239b63584391600f2472695600f6dbc 481 Gene3D G3DSA:3.40.50.410 322 468 3.6E-8 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JV59_24460 d89f6e8975e184601f78b7a373e6ba06 550 SUPERFAMILY SSF58113 420 542 1.23E-5 T 14-10-2018 JV59_24460 d89f6e8975e184601f78b7a373e6ba06 550 Gene3D G3DSA:1.20.5.1230 367 549 9.0E-6 T 14-10-2018 JV59_24460 d89f6e8975e184601f78b7a373e6ba06 550 SUPERFAMILY SSF58113 290 441 3.01E-6 T 14-10-2018 JV59_39885 f881f3d86a7b55e2d614da501ac6d077 222 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 204 5.8E-62 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 JV59_39885 f881f3d86a7b55e2d614da501ac6d077 222 Pfam PF02592 Putative vitamin uptake transporter 43 199 9.2E-38 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 JV59_39885 f881f3d86a7b55e2d614da501ac6d077 222 Hamap MF_02088 Probable queuosine precursor transporter. 7 214 15.439 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 JV59_22095 eac089d9667263eefc49b502b3f91a84 198 Gene3D G3DSA:3.40.50.720 1 197 3.5E-33 T 14-10-2018 JV59_22095 eac089d9667263eefc49b502b3f91a84 198 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 8.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_22095 eac089d9667263eefc49b502b3f91a84 198 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 162 8.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_22095 eac089d9667263eefc49b502b3f91a84 198 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 145 8.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_22095 eac089d9667263eefc49b502b3f91a84 198 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 55 66 8.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_22095 eac089d9667263eefc49b502b3f91a84 198 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 172 1.2E-18 T 14-10-2018 JV59_22095 eac089d9667263eefc49b502b3f91a84 198 SUPERFAMILY SSF51735 1 190 2.18E-25 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_26165 8ce70cb90594fd70ccb9d731a20271ce 139 SUPERFAMILY SSF111038 1 139 2.22E-50 T 14-10-2018 IPR035917 YjbQ-like superfamily JV59_26165 8ce70cb90594fd70ccb9d731a20271ce 139 PIRSF PIRSF004681 1 139 1.4E-46 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 JV59_26165 8ce70cb90594fd70ccb9d731a20271ce 139 Gene3D G3DSA:2.60.120.460 2 139 8.6E-43 T 14-10-2018 IPR035917 YjbQ-like superfamily JV59_26165 8ce70cb90594fd70ccb9d731a20271ce 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 9 139 2.9E-46 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 JV59_26165 8ce70cb90594fd70ccb9d731a20271ce 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 5.9E-39 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 JV59_26165 8ce70cb90594fd70ccb9d731a20271ce 139 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 JV59_15945 2dc8c6babaacfeade4a8a28602c23008 331 SUPERFAMILY SSF52540 7 257 5.78E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_15945 2dc8c6babaacfeade4a8a28602c23008 331 SMART SM00382 42 235 4.5E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_15945 2dc8c6babaacfeade4a8a28602c23008 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 304 4.6E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JV59_15945 2dc8c6babaacfeade4a8a28602c23008 331 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_15945 2dc8c6babaacfeade4a8a28602c23008 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 322 2.7E-23 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JV59_15945 2dc8c6babaacfeade4a8a28602c23008 331 Pfam PF00005 ABC transporter 34 185 7.9E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_15945 2dc8c6babaacfeade4a8a28602c23008 331 Gene3D G3DSA:3.40.50.300 4 328 3.9E-96 T 14-10-2018 JV59_36220 94845edc16861c96a946b0a360f7e275 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.4E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_36220 94845edc16861c96a946b0a360f7e275 332 SUPERFAMILY SSF47413 1 60 3.86E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_36220 94845edc16861c96a946b0a360f7e275 332 SUPERFAMILY SSF53822 61 330 3.93E-81 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_36220 94845edc16861c96a946b0a360f7e275 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 JV59_36220 94845edc16861c96a946b0a360f7e275 332 SMART SM00354 1 71 7.5E-32 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_36220 94845edc16861c96a946b0a360f7e275 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.1E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_36220 94845edc16861c96a946b0a360f7e275 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.1E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_36220 94845edc16861c96a946b0a360f7e275 332 Gene3D G3DSA:3.40.50.2300 56 304 1.9E-70 T 14-10-2018 JV59_36220 94845edc16861c96a946b0a360f7e275 332 Pfam PF13377 Periplasmic binding protein-like domain 168 329 3.5E-33 T 14-10-2018 JV59_36220 94845edc16861c96a946b0a360f7e275 332 Gene3D G3DSA:1.10.260.40 1 55 7.4E-23 T 14-10-2018 JV59_36220 94845edc16861c96a946b0a360f7e275 332 Gene3D G3DSA:3.40.50.2300 160 289 1.9E-70 T 14-10-2018 JV59_16720 eb7091e2f46dbf729067213ad09c4ebf 476 Pfam PF00171 Aldehyde dehydrogenase family 15 469 8.5E-167 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JV59_16720 eb7091e2f46dbf729067213ad09c4ebf 476 Gene3D G3DSA:3.40.605.10 18 465 5.1E-176 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JV59_16720 eb7091e2f46dbf729067213ad09c4ebf 476 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 23 468 8.4E-201 T 14-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 JV59_16720 eb7091e2f46dbf729067213ad09c4ebf 476 SUPERFAMILY SSF53720 16 473 4.97E-161 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JV59_16720 eb7091e2f46dbf729067213ad09c4ebf 476 Gene3D G3DSA:3.40.309.10 255 442 5.1E-176 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JV59_16720 eb7091e2f46dbf729067213ad09c4ebf 476 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 JV59_16720 eb7091e2f46dbf729067213ad09c4ebf 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JV59_38775 4a45fa65f20198646e1a4a71608ba379 207 SMART SM00072 3 187 7.8E-76 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit JV59_38775 4a45fa65f20198646e1a4a71608ba379 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 1.0E-75 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 JV59_38775 4a45fa65f20198646e1a4a71608ba379 207 SUPERFAMILY SSF52540 3 189 1.22E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_38775 4a45fa65f20198646e1a4a71608ba379 207 Pfam PF00625 Guanylate kinase 5 185 4.4E-61 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit JV59_38775 4a45fa65f20198646e1a4a71608ba379 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.656 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 JV59_38775 4a45fa65f20198646e1a4a71608ba379 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 JV59_38775 4a45fa65f20198646e1a4a71608ba379 207 Gene3D G3DSA:3.30.63.10 37 96 1.1E-73 T 14-10-2018 JV59_38775 4a45fa65f20198646e1a4a71608ba379 207 Gene3D G3DSA:3.40.50.300 8 183 1.1E-73 T 14-10-2018 JV59_20810 c668fe42aa2b1b459d5d7d2284d3a84f 157 SUPERFAMILY SSF56784 1 154 5.93E-22 T 14-10-2018 IPR036412 HAD-like superfamily JV59_20810 c668fe42aa2b1b459d5d7d2284d3a84f 157 Pfam PF13419 Haloacid dehalogenase-like hydrolase 29 132 2.4E-9 T 14-10-2018 JV59_20810 c668fe42aa2b1b459d5d7d2284d3a84f 157 Gene3D G3DSA:3.40.50.1000 2 156 2.6E-29 T 14-10-2018 IPR023214 HAD superfamily JV59_28655 975253f168362dbe34a3d9d39492d0d8 179 Pfam PF02600 Disulfide bond formation protein DsbB 10 90 4.8E-13 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 JV59_28655 975253f168362dbe34a3d9d39492d0d8 179 SUPERFAMILY SSF158442 11 122 3.66E-20 T 14-10-2018 IPR023380 DsbB-like superfamily JV59_28655 975253f168362dbe34a3d9d39492d0d8 179 Gene3D G3DSA:1.20.1550.10 2 97 6.5E-12 T 14-10-2018 IPR023380 DsbB-like superfamily JV59_36990 92a41dd49d56478f31c2582a0ff425c3 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 5.8E-24 T 14-10-2018 IPR005631 Flavinator of succinate dehydrogenase JV59_36990 92a41dd49d56478f31c2582a0ff425c3 86 Gene3D G3DSA:1.10.150.250 1 86 1.4E-36 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily JV59_36990 92a41dd49d56478f31c2582a0ff425c3 86 SUPERFAMILY SSF109910 2 79 9.94E-26 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily JV59_32515 16ed52a30659f322c8ae4b0c9e927c66 565 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 556 1.7E-291 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JV59_32515 16ed52a30659f322c8ae4b0c9e927c66 565 Pfam PF01175 Urocanase Rossmann-like domain 146 351 5.6E-84 T 14-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JV59_32515 16ed52a30659f322c8ae4b0c9e927c66 565 Pfam PF17392 Urocanase C-terminal domain 354 548 1.2E-91 T 14-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JV59_32515 16ed52a30659f322c8ae4b0c9e927c66 565 ProSitePatterns PS01233 Urocanase signature. 444 459 - T 14-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JV59_32515 16ed52a30659f322c8ae4b0c9e927c66 565 Hamap MF_00577 Urocanate hydratase [hutU]. 1 558 49.496 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JV59_32515 16ed52a30659f322c8ae4b0c9e927c66 565 Gene3D G3DSA:3.40.1770.10 22 544 1.3E-257 T 14-10-2018 JV59_32515 16ed52a30659f322c8ae4b0c9e927c66 565 Gene3D G3DSA:3.40.50.10730 147 351 1.3E-257 T 14-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JV59_32515 16ed52a30659f322c8ae4b0c9e927c66 565 PIRSF PIRSF001423 1 563 2.4E-294 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JV59_32515 16ed52a30659f322c8ae4b0c9e927c66 565 SUPERFAMILY SSF111326 11 557 2.75E-259 T 14-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JV59_32515 16ed52a30659f322c8ae4b0c9e927c66 565 Pfam PF17391 Urocanase N-terminal domain 17 143 1.8E-62 T 14-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JV59_32540 0f5b2b5520f406d50f015fcfb329369c 227 SUPERFAMILY SSF103039 10 173 3.14E-24 T 14-10-2018 IPR028976 CheC-like superfamily JV59_32540 0f5b2b5520f406d50f015fcfb329369c 227 Gene3D G3DSA:3.40.1550.10 8 173 7.8E-21 T 14-10-2018 IPR028976 CheC-like superfamily JV59_32540 0f5b2b5520f406d50f015fcfb329369c 227 Pfam PF11813 Protein of unknown function (DUF3334) 3 227 5.3E-116 T 14-10-2018 IPR024513 Protein of unknown function DUF3334 JV59_26920 5576694414f5c9f00d8ca599c6dccecf 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 151 7.8E-63 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JV59_26920 5576694414f5c9f00d8ca599c6dccecf 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 4.1E-163 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JV59_26920 5576694414f5c9f00d8ca599c6dccecf 319 SUPERFAMILY SSF52096 5 318 7.29E-104 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JV59_26920 5576694414f5c9f00d8ca599c6dccecf 319 Gene3D G3DSA:3.90.226.10 2 318 6.9E-120 T 14-10-2018 JV59_26920 5576694414f5c9f00d8ca599c6dccecf 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.294 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JV59_26920 5576694414f5c9f00d8ca599c6dccecf 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 1.6E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JV59_26920 5576694414f5c9f00d8ca599c6dccecf 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 1.6E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JV59_26920 5576694414f5c9f00d8ca599c6dccecf 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 1.6E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JV59_26920 5576694414f5c9f00d8ca599c6dccecf 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 1.6E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JV59_26920 5576694414f5c9f00d8ca599c6dccecf 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 1.6E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JV59_26920 5576694414f5c9f00d8ca599c6dccecf 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 1.6E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JV59_36515 8816dfd492f14783f2aad199fae8c203 325 Pfam PF00849 RNA pseudouridylate synthase 93 241 1.4E-29 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_36515 8816dfd492f14783f2aad199fae8c203 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 313 2.5E-106 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_36515 8816dfd492f14783f2aad199fae8c203 325 Gene3D G3DSA:3.30.2350.10 85 316 1.0E-72 T 14-10-2018 JV59_36515 8816dfd492f14783f2aad199fae8c203 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_36515 8816dfd492f14783f2aad199fae8c203 325 SMART SM00363 18 83 3.7E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_36515 8816dfd492f14783f2aad199fae8c203 325 Gene3D G3DSA:3.10.290.10 2 76 3.2E-24 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 JV59_36515 8816dfd492f14783f2aad199fae8c203 325 SUPERFAMILY SSF55120 77 316 1.03E-79 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_36515 8816dfd492f14783f2aad199fae8c203 325 SUPERFAMILY SSF55174 17 68 1.68E-11 T 14-10-2018 JV59_36515 8816dfd492f14783f2aad199fae8c203 325 Pfam PF01479 S4 domain 18 65 2.0E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_00015 831dcedda49f41394bcb1de1e3e57a39 264 Gene3D G3DSA:3.40.1160.10 5 260 4.7E-66 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JV59_00015 831dcedda49f41394bcb1de1e3e57a39 264 TIGRFAM TIGR00761 argB: acetylglutamate kinase 9 234 2.8E-64 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 JV59_00015 831dcedda49f41394bcb1de1e3e57a39 264 Hamap MF_00082 Acetylglutamate kinase [argB]. 6 255 42.112 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 JV59_00015 831dcedda49f41394bcb1de1e3e57a39 264 PIRSF PIRSF000728 1 263 1.2E-69 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 JV59_00015 831dcedda49f41394bcb1de1e3e57a39 264 SUPERFAMILY SSF53633 9 261 1.96E-59 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JV59_00015 831dcedda49f41394bcb1de1e3e57a39 264 Pfam PF00696 Amino acid kinase family 9 238 4.4E-36 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 JV59_01670 2e541d84a0424b6578a7e0d954bcf259 430 Pfam PF00202 Aminotransferase class-III 32 395 2.6E-76 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JV59_01670 2e541d84a0424b6578a7e0d954bcf259 430 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 424 1.0E-194 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 JV59_01670 2e541d84a0424b6578a7e0d954bcf259 430 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JV59_01670 2e541d84a0424b6578a7e0d954bcf259 430 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.348 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 JV59_01670 2e541d84a0424b6578a7e0d954bcf259 430 Gene3D G3DSA:3.40.640.10 69 317 2.6E-178 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_01670 2e541d84a0424b6578a7e0d954bcf259 430 SUPERFAMILY SSF53383 1 423 4.64E-135 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_01670 2e541d84a0424b6578a7e0d954bcf259 430 Gene3D G3DSA:3.90.1150.10 7 418 2.6E-178 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_31280 ecf0cf3af6e2ed32b76f2017d0f50c72 234 SUPERFAMILY SSF46689 183 230 2.51E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_31280 ecf0cf3af6e2ed32b76f2017d0f50c72 234 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 198 213 2.3E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_31280 ecf0cf3af6e2ed32b76f2017d0f50c72 234 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 213 229 2.3E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_31280 ecf0cf3af6e2ed32b76f2017d0f50c72 234 Pfam PF12833 Helix-turn-helix domain 152 230 1.4E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_31280 ecf0cf3af6e2ed32b76f2017d0f50c72 234 SMART SM00342 146 229 5.5E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_31280 ecf0cf3af6e2ed32b76f2017d0f50c72 234 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 183 225 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JV59_31280 ecf0cf3af6e2ed32b76f2017d0f50c72 234 Gene3D G3DSA:1.10.10.60 127 234 1.1E-28 T 14-10-2018 JV59_33815 1781307ceac8822799fc924a56ac9fcd 59 SUPERFAMILY SSF158997 1 54 2.75E-20 T 14-10-2018 JV59_33815 1781307ceac8822799fc924a56ac9fcd 59 Pfam PF03966 Trm112p-like protein 2 41 3.9E-11 T 14-10-2018 IPR005651 Trm112-like JV59_33815 1781307ceac8822799fc924a56ac9fcd 59 Gene3D G3DSA:2.20.25.10 8 59 5.3E-24 T 14-10-2018 JV59_33815 1781307ceac8822799fc924a56ac9fcd 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.651 T 14-10-2018 IPR038053 Uncharacterised protein family UPF0434 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 1.7E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 623 0.0 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 Gene3D G3DSA:3.40.50.670 390 621 5.0E-93 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 1.1E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 1.1E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 1.1E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 1.1E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 1.1E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 1.1E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 1.1E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 1.1E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 1.1E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 1.1E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 1.1E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 1.1E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 1.1E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 1.1E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 Pfam PF00204 DNA gyrase B 218 384 3.0E-42 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 SUPERFAMILY SSF54211 217 382 4.17E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 SMART SM00433 34 622 1.1E-214 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 PRINTS PR00418 DNA topoisomerase II family signature 109 123 4.7E-58 T 14-10-2018 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 4.7E-58 T 14-10-2018 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 PRINTS PR00418 DNA topoisomerase II family signature 560 576 4.7E-58 T 14-10-2018 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 PRINTS PR00418 DNA topoisomerase II family signature 31 46 4.7E-58 T 14-10-2018 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 4.7E-58 T 14-10-2018 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 4.7E-58 T 14-10-2018 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 4.7E-58 T 14-10-2018 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 4.7E-58 T 14-10-2018 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 PRINTS PR00418 DNA topoisomerase II family signature 66 79 4.7E-58 T 14-10-2018 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 SMART SM00387 27 173 3.0E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 Gene3D G3DSA:3.30.565.10 2 215 4.5E-75 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 SUPERFAMILY SSF56719 388 619 9.68E-80 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 Pfam PF01751 Toprim domain 413 522 5.1E-12 T 14-10-2018 IPR006171 TOPRIM domain JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 Gene3D G3DSA:3.30.230.10 216 389 1.5E-57 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 SUPERFAMILY SSF55874 5 215 1.2E-65 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 6.2E-27 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 JV59_01925 9fdf825b6e80cc8b90881c9b5be4ccb5 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 46.865 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JV59_39205 21981600e48960ec13b1b0e3f4ba07f8 307 SUPERFAMILY SSF55681 8 293 4.47E-131 T 14-10-2018 JV59_39205 21981600e48960ec13b1b0e3f4ba07f8 307 Gene3D G3DSA:1.20.58.180 216 298 4.2E-33 T 14-10-2018 JV59_39205 21981600e48960ec13b1b0e3f4ba07f8 307 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 293 8.0E-148 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JV59_39205 21981600e48960ec13b1b0e3f4ba07f8 307 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 302 1.3E-169 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JV59_39205 21981600e48960ec13b1b0e3f4ba07f8 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 3.7E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JV59_39205 21981600e48960ec13b1b0e3f4ba07f8 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 3.7E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JV59_39205 21981600e48960ec13b1b0e3f4ba07f8 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 3.7E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JV59_39205 21981600e48960ec13b1b0e3f4ba07f8 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 3.7E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JV59_39205 21981600e48960ec13b1b0e3f4ba07f8 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 3.7E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JV59_39205 21981600e48960ec13b1b0e3f4ba07f8 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 3.7E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JV59_39205 21981600e48960ec13b1b0e3f4ba07f8 307 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 294 61.391 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JV59_39205 21981600e48960ec13b1b0e3f4ba07f8 307 Gene3D G3DSA:3.30.930.10 1 215 1.0E-109 T 14-10-2018 JV59_37690 664c377913950fdaedb5ef6652ff809e 201 ProSitePatterns PS00501 Signal peptidases I serine active site. 117 124 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 JV59_37690 664c377913950fdaedb5ef6652ff809e 201 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 8 49 6.4E-8 T 14-10-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 JV59_37690 664c377913950fdaedb5ef6652ff809e 201 Gene3D G3DSA:1.10.260.40 2 58 1.5E-11 T 14-10-2018 JV59_37690 664c377913950fdaedb5ef6652ff809e 201 Gene3D G3DSA:2.10.109.10 74 200 1.3E-13 T 14-10-2018 JV59_37690 664c377913950fdaedb5ef6652ff809e 201 Pfam PF00717 Peptidase S24-like 115 178 3.4E-11 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C JV59_37690 664c377913950fdaedb5ef6652ff809e 201 SUPERFAMILY SSF51306 68 197 6.67E-25 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily JV59_26650 e5ff44acbc665b47fea755377bff1c4b 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 299 1.8E-143 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 JV59_26650 e5ff44acbc665b47fea755377bff1c4b 305 SUPERFAMILY SSF54211 134 278 1.74E-52 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JV59_26650 e5ff44acbc665b47fea755377bff1c4b 305 Gene3D G3DSA:3.30.230.20 1 128 2.1E-52 T 14-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 JV59_26650 e5ff44acbc665b47fea755377bff1c4b 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 2.1E-109 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 JV59_26650 e5ff44acbc665b47fea755377bff1c4b 305 Gene3D G3DSA:3.30.1700.10 129 305 1.5E-70 T 14-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 JV59_26650 e5ff44acbc665b47fea755377bff1c4b 305 SUPERFAMILY SSF54211 3 126 4.93E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JV59_26650 e5ff44acbc665b47fea755377bff1c4b 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.957 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 JV59_31075 e8d273dc562ffd31ff6526fa9736f595 280 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 134 270 1.8E-16 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 JV59_31075 e8d273dc562ffd31ff6526fa9736f595 280 Gene3D G3DSA:1.10.530.10 130 272 2.7E-14 T 14-10-2018 JV59_36090 7d02674bcd7db46f38e845d53726f15f 432 SMART SM00091 98 166 2.8E-6 T 14-10-2018 IPR000014 PAS domain JV59_36090 7d02674bcd7db46f38e845d53726f15f 432 Gene3D G3DSA:3.30.565.10 279 429 6.8E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_36090 7d02674bcd7db46f38e845d53726f15f 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 5.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_36090 7d02674bcd7db46f38e845d53726f15f 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 5.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_36090 7d02674bcd7db46f38e845d53726f15f 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 5.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_36090 7d02674bcd7db46f38e845d53726f15f 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 5.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_36090 7d02674bcd7db46f38e845d53726f15f 432 Pfam PF11808 Domain of unknown function (DUF3329) 7 91 7.2E-32 T 14-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 JV59_36090 7d02674bcd7db46f38e845d53726f15f 432 Pfam PF00989 PAS fold 99 167 5.2E-8 T 14-10-2018 IPR013767 PAS fold GO:0006355 JV59_36090 7d02674bcd7db46f38e845d53726f15f 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 99 203 9.1E-6 T 14-10-2018 IPR000014 PAS domain JV59_36090 7d02674bcd7db46f38e845d53726f15f 432 Gene3D G3DSA:3.30.450.20 85 201 1.1E-9 T 14-10-2018 JV59_36090 7d02674bcd7db46f38e845d53726f15f 432 SMART SM00388 205 272 1.0E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_36090 7d02674bcd7db46f38e845d53726f15f 432 SUPERFAMILY SSF55874 261 426 3.41E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_36090 7d02674bcd7db46f38e845d53726f15f 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 4.1E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_36090 7d02674bcd7db46f38e845d53726f15f 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 427 3.9E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_36090 7d02674bcd7db46f38e845d53726f15f 432 SUPERFAMILY SSF55785 86 196 9.07E-11 T 14-10-2018 IPR035965 PAS domain superfamily JV59_36090 7d02674bcd7db46f38e845d53726f15f 432 Gene3D G3DSA:1.10.287.130 202 272 2.3E-20 T 14-10-2018 JV59_36090 7d02674bcd7db46f38e845d53726f15f 432 SMART SM00387 317 429 3.7E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_36090 7d02674bcd7db46f38e845d53726f15f 432 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 8.6E-139 T 14-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 JV59_36090 7d02674bcd7db46f38e845d53726f15f 432 SUPERFAMILY SSF47384 192 271 1.63E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_33720 17fa835eefffa121cbea62a1fe085583 179 Gene3D G3DSA:3.40.50.300 2 166 2.3E-30 T 14-10-2018 JV59_33720 17fa835eefffa121cbea62a1fe085583 179 SUPERFAMILY SSF52540 1 133 6.17E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_33720 17fa835eefffa121cbea62a1fe085583 179 Pfam PF13207 AAA domain 9 124 2.8E-14 T 14-10-2018 JV59_17230 96402884dd3672801ae892f85fe53fca 303 SUPERFAMILY SSF103481 185 286 2.22E-12 T 14-10-2018 JV59_17230 96402884dd3672801ae892f85fe53fca 303 SUPERFAMILY SSF103481 42 138 8.76E-12 T 14-10-2018 JV59_17230 96402884dd3672801ae892f85fe53fca 303 Pfam PF00892 EamA-like transporter family 9 135 1.8E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_17230 96402884dd3672801ae892f85fe53fca 303 Pfam PF00892 EamA-like transporter family 150 283 3.0E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_18670 042b65c0d1e4fa3637a38b2d00302f37 314 PIRSF PIRSF006230 2 280 1.9E-106 T 14-10-2018 IPR016478 GTPase, MTG1 JV59_18670 042b65c0d1e4fa3637a38b2d00302f37 314 PIRSF PIRSF006230 283 313 1500.0 T 14-10-2018 IPR016478 GTPase, MTG1 JV59_18670 042b65c0d1e4fa3637a38b2d00302f37 314 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 6 275 4.7E-109 T 14-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis JV59_18670 042b65c0d1e4fa3637a38b2d00302f37 314 SUPERFAMILY SSF52540 12 185 1.07E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_18670 042b65c0d1e4fa3637a38b2d00302f37 314 Gene3D G3DSA:1.10.1580.10 177 268 1.5E-29 T 14-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily JV59_18670 042b65c0d1e4fa3637a38b2d00302f37 314 Pfam PF01926 50S ribosome-binding GTPase 120 185 3.7E-14 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JV59_18670 042b65c0d1e4fa3637a38b2d00302f37 314 Gene3D G3DSA:3.40.50.300 6 174 1.7E-44 T 14-10-2018 JV59_20470 26d7b592a145b23a90b54b2a5344fc8a 493 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 10 322 7.1E-87 T 14-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal JV59_20470 26d7b592a145b23a90b54b2a5344fc8a 493 Gene3D G3DSA:2.115.10.20 1 335 7.5E-112 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily JV59_20470 26d7b592a145b23a90b54b2a5344fc8a 493 SMART SM00640 10 451 5.9E-101 T 14-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 JV59_20470 26d7b592a145b23a90b54b2a5344fc8a 493 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 10 23 - T 14-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 JV59_20470 26d7b592a145b23a90b54b2a5344fc8a 493 SUPERFAMILY SSF75005 2 331 5.97E-93 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily JV59_20470 26d7b592a145b23a90b54b2a5344fc8a 493 Gene3D G3DSA:2.60.120.560 346 491 7.1E-14 T 14-10-2018 JV59_20470 26d7b592a145b23a90b54b2a5344fc8a 493 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 361 484 1.9E-8 T 14-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal JV59_20470 26d7b592a145b23a90b54b2a5344fc8a 493 SUPERFAMILY SSF49899 368 488 2.11E-9 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily JV59_29695 1f1eb9b0feb0e6861cb207f99de6d495 394 SUPERFAMILY SSF111369 78 316 9.68E-21 T 14-10-2018 JV59_29695 1f1eb9b0feb0e6861cb207f99de6d495 394 Gene3D G3DSA:2.40.420.20 322 388 7.6E-45 T 14-10-2018 JV59_29695 1f1eb9b0feb0e6861cb207f99de6d495 394 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 296 3.8E-10 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JV59_29695 1f1eb9b0feb0e6861cb207f99de6d495 394 Gene3D G3DSA:2.40.30.170 77 321 7.6E-45 T 14-10-2018 JV59_29695 1f1eb9b0feb0e6861cb207f99de6d495 394 Gene3D G3DSA:1.10.287.470 121 197 7.6E-45 T 14-10-2018 JV59_29695 1f1eb9b0feb0e6861cb207f99de6d495 394 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 62 390 8.3E-45 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 JV59_29695 1f1eb9b0feb0e6861cb207f99de6d495 394 Gene3D G3DSA:2.40.50.100 84 231 7.6E-45 T 14-10-2018 JV59_18820 0ea9e2f4365343b9b5c9bd241547a7e7 257 SUPERFAMILY SSF53850 23 255 3.85E-27 T 14-10-2018 JV59_18820 0ea9e2f4365343b9b5c9bd241547a7e7 257 Gene3D G3DSA:3.40.190.10 30 251 8.7E-20 T 14-10-2018 JV59_18820 0ea9e2f4365343b9b5c9bd241547a7e7 257 Gene3D G3DSA:3.40.190.10 106 214 8.7E-20 T 14-10-2018 JV59_18820 0ea9e2f4365343b9b5c9bd241547a7e7 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 24 254 3.0E-16 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_28145 fca7a7ccb81db2d57a714e3c810c3807 142 SUPERFAMILY SSF54593 5 133 1.25E-13 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_28145 fca7a7ccb81db2d57a714e3c810c3807 142 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 108 9.1E-8 T 14-10-2018 JV59_28145 fca7a7ccb81db2d57a714e3c810c3807 142 Gene3D G3DSA:3.10.180.10 6 131 2.1E-9 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_29535 cdbaec9510427e423eac3b8a0babff9b 320 Pfam PF11059 Protein of unknown function (DUF2860) 28 315 1.9E-83 T 14-10-2018 IPR016896 Protein of unknown function DUF2860 JV59_29535 cdbaec9510427e423eac3b8a0babff9b 320 PIRSF PIRSF028696 1 320 3.2E-82 T 14-10-2018 IPR016896 Protein of unknown function DUF2860 JV59_35285 17b602b3bc1d0609f2dfe04e6e0972c5 300 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 1.3E-83 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 JV59_35285 17b602b3bc1d0609f2dfe04e6e0972c5 300 Pfam PF04261 Dyp-type peroxidase family 5 293 2.6E-88 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 JV59_35285 17b602b3bc1d0609f2dfe04e6e0972c5 300 SUPERFAMILY SSF54909 1 297 7.33E-94 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_28740 238661e2a001aeab9195e5e57c77aeda 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 221 8.2E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_28740 238661e2a001aeab9195e5e57c77aeda 224 SUPERFAMILY SSF52172 2 127 4.27E-40 T 14-10-2018 IPR011006 CheY-like superfamily JV59_28740 238661e2a001aeab9195e5e57c77aeda 224 SMART SM00862 147 221 1.6E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_28740 238661e2a001aeab9195e5e57c77aeda 224 Gene3D G3DSA:3.40.50.2300 1 128 4.5E-36 T 14-10-2018 JV59_28740 238661e2a001aeab9195e5e57c77aeda 224 SMART SM00448 2 113 3.1E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_28740 238661e2a001aeab9195e5e57c77aeda 224 SUPERFAMILY SSF46894 123 222 7.65E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_28740 238661e2a001aeab9195e5e57c77aeda 224 Gene3D G3DSA:1.10.10.10 129 223 4.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_28740 238661e2a001aeab9195e5e57c77aeda 224 Pfam PF00072 Response regulator receiver domain 4 112 8.2E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_33150 5f243c8387a1edbf96556a15f748ce97 247 Gene3D G3DSA:3.40.50.1110 34 247 1.8E-14 T 14-10-2018 IPR036514 SGNH hydrolase superfamily JV59_33150 5f243c8387a1edbf96556a15f748ce97 247 SUPERFAMILY SSF52266 44 244 1.27E-12 T 14-10-2018 JV59_36510 a883691903843a26854cb527c61b6e82 242 Gene3D G3DSA:3.60.140.10 1 242 6.0E-86 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily JV59_36510 a883691903843a26854cb527c61b6e82 242 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 29 240 1.4E-59 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase JV59_36510 a883691903843a26854cb527c61b6e82 242 SUPERFAMILY SSF64438 2 241 2.93E-81 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic JV59_36510 a883691903843a26854cb527c61b6e82 242 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 239 2.7E-71 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase JV59_33785 b348fb332a904b28d26d91504b7f7079 166 Gene3D G3DSA:1.10.287.680 1 53 5.0E-33 T 14-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily JV59_33785 b348fb332a904b28d26d91504b7f7079 166 Pfam PF03887 YfbU domain 1 166 7.2E-69 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU JV59_33785 b348fb332a904b28d26d91504b7f7079 166 Gene3D G3DSA:1.10.3190.10 54 166 7.0E-36 T 14-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily JV59_33785 b348fb332a904b28d26d91504b7f7079 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 7.0E-79 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU JV59_33785 b348fb332a904b28d26d91504b7f7079 166 SUPERFAMILY SSF116960 1 166 1.7E-62 T 14-10-2018 JV59_33785 b348fb332a904b28d26d91504b7f7079 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 37.483 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU JV59_33785 b348fb332a904b28d26d91504b7f7079 166 PIRSF PIRSF006272 1 166 1.2E-77 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU JV59_16455 c888e295757804ca5d9a2a0f02756f1b 442 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 373 1.5E-150 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 JV59_16455 c888e295757804ca5d9a2a0f02756f1b 442 PIRSF PIRSF004539 1 441 1.3E-183 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 JV59_16455 c888e295757804ca5d9a2a0f02756f1b 442 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 440 6.1E-147 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 JV59_20190 6f090d11c321fc27cf9aba9e45c331d2 342 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JV59_20190 6f090d11c321fc27cf9aba9e45c331d2 342 Gene3D G3DSA:3.20.20.140 2 342 1.4E-110 T 14-10-2018 JV59_20190 6f090d11c321fc27cf9aba9e45c331d2 342 PIRSF PIRSF001237 1 342 1.7E-142 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JV59_20190 6f090d11c321fc27cf9aba9e45c331d2 342 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 3.7E-139 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JV59_20190 6f090d11c321fc27cf9aba9e45c331d2 342 Pfam PF01979 Amidohydrolase family 11 309 4.9E-16 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JV59_20190 6f090d11c321fc27cf9aba9e45c331d2 342 SUPERFAMILY SSF51556 1 342 4.77E-146 T 14-10-2018 IPR032466 Metal-dependent hydrolase JV59_20190 6f090d11c321fc27cf9aba9e45c331d2 342 Hamap MF_00219 Dihydroorotase [pyrC]. 2 342 46.634 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JV59_20190 6f090d11c321fc27cf9aba9e45c331d2 342 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JV59_18180 35477b98aa90b63f9e6ffe9399a59f55 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 5.5E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_18180 35477b98aa90b63f9e6ffe9399a59f55 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 5.5E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_18180 35477b98aa90b63f9e6ffe9399a59f55 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 5.5E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_18180 35477b98aa90b63f9e6ffe9399a59f55 128 Gene3D G3DSA:1.10.1660.10 1 125 2.8E-32 T 14-10-2018 JV59_18180 35477b98aa90b63f9e6ffe9399a59f55 128 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_18180 35477b98aa90b63f9e6ffe9399a59f55 128 Pfam PF13411 MerR HTH family regulatory protein 1 67 6.7E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_18180 35477b98aa90b63f9e6ffe9399a59f55 128 SUPERFAMILY SSF46955 1 126 4.03E-34 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily JV59_18180 35477b98aa90b63f9e6ffe9399a59f55 128 SMART SM00422 1 70 2.0E-27 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_18180 35477b98aa90b63f9e6ffe9399a59f55 128 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 127 1.7E-59 T 14-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 JV59_20540 cc1b181772b270dc5c8de8ed95855fa2 210 Pfam PF00072 Response regulator receiver domain 6 111 1.1E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_20540 cc1b181772b270dc5c8de8ed95855fa2 210 SMART SM00448 3 114 2.9E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_20540 cc1b181772b270dc5c8de8ed95855fa2 210 SUPERFAMILY SSF46785 131 197 9.85E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_20540 cc1b181772b270dc5c8de8ed95855fa2 210 Gene3D G3DSA:3.40.50.2300 2 117 5.4E-31 T 14-10-2018 JV59_20540 cc1b181772b270dc5c8de8ed95855fa2 210 Pfam PF12840 Helix-turn-helix domain 133 189 2.0E-6 T 14-10-2018 JV59_20540 cc1b181772b270dc5c8de8ed95855fa2 210 Gene3D G3DSA:1.10.10.10 118 207 1.6E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_20540 cc1b181772b270dc5c8de8ed95855fa2 210 SMART SM00418 134 206 0.0016 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_20540 cc1b181772b270dc5c8de8ed95855fa2 210 SUPERFAMILY SSF52172 3 141 2.28E-36 T 14-10-2018 IPR011006 CheY-like superfamily JV59_20090 d2ea7c75e4b1e7ed9d18a13f3a0cf8ff 140 Gene3D G3DSA:3.30.565.10 17 138 2.0E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_20090 d2ea7c75e4b1e7ed9d18a13f3a0cf8ff 140 SUPERFAMILY SSF55874 26 135 5.75E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_20090 d2ea7c75e4b1e7ed9d18a13f3a0cf8ff 140 Pfam PF13581 Histidine kinase-like ATPase domain 31 136 2.2E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_28500 5a6f0d2443b790bbc57d691db370c06d 210 Gene3D G3DSA:3.40.50.620 16 152 2.8E-28 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_28500 5a6f0d2443b790bbc57d691db370c06d 210 Pfam PF02698 DUF218 domain 26 149 1.7E-24 T 14-10-2018 IPR003848 Domain of unknown function DUF218 JV59_19080 0ccd7d40569431309e7299e92a6c7832 114 Pfam PF13673 Acetyltransferase (GNAT) domain 3 111 1.8E-26 T 14-10-2018 IPR000182 GNAT domain JV59_19080 0ccd7d40569431309e7299e92a6c7832 114 Gene3D G3DSA:3.40.630.30 1 113 1.4E-16 T 14-10-2018 JV59_19080 0ccd7d40569431309e7299e92a6c7832 114 SUPERFAMILY SSF55729 3 111 1.92E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_04580 ffdcc72af80bc216b5ba589d19e5e1e2 241 Pfam PF00106 short chain dehydrogenase 3 181 1.5E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_04580 ffdcc72af80bc216b5ba589d19e5e1e2 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 128 156 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JV59_04580 ffdcc72af80bc216b5ba589d19e5e1e2 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 3.5E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_04580 ffdcc72af80bc216b5ba589d19e5e1e2 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 3.5E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_04580 ffdcc72af80bc216b5ba589d19e5e1e2 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 3.5E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_04580 ffdcc72af80bc216b5ba589d19e5e1e2 241 SUPERFAMILY SSF51735 4 235 4.18E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_04580 ffdcc72af80bc216b5ba589d19e5e1e2 241 Gene3D G3DSA:3.40.50.720 2 238 5.4E-44 T 14-10-2018 JV59_28690 67a20d890ba2715da97c92b8ea19b0db 153 Gene3D G3DSA:3.10.180.10 1 144 2.8E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_28690 67a20d890ba2715da97c92b8ea19b0db 153 SUPERFAMILY SSF54593 1 136 1.97E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_28690 67a20d890ba2715da97c92b8ea19b0db 153 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 132 1.5E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JV59_20445 a12d33524b62722b6da0ed4221ee0e14 577 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 353 524 3.0E-16 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain JV59_20445 a12d33524b62722b6da0ed4221ee0e14 577 Gene3D G3DSA:3.40.140.10 353 555 2.8E-40 T 14-10-2018 JV59_20445 a12d33524b62722b6da0ed4221ee0e14 577 SUPERFAMILY SSF53927 354 542 5.16E-24 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 JV59_20445 a12d33524b62722b6da0ed4221ee0e14 577 Gene3D G3DSA:3.40.50.300 149 336 2.3E-13 T 14-10-2018 JV59_16745 367a7e2ad96824f026879f32490e6403 249 Pfam PF17131 Outer membrane lipoprotein-sorting protein 68 243 7.6E-36 T 14-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein JV59_16745 367a7e2ad96824f026879f32490e6403 249 Gene3D G3DSA:2.50.20.10 20 243 4.9E-37 T 14-10-2018 JV59_16745 367a7e2ad96824f026879f32490e6403 249 PIRSF PIRSF028205 2 246 7.2E-93 T 14-10-2018 IPR011220 Uncharacterised conserved protein UCP028205 JV59_22630 3e604966d4b56971fbbfe4b4bc8968d5 307 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 5 301 2.5E-164 T 14-10-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 JV59_22630 3e604966d4b56971fbbfe4b4bc8968d5 307 SUPERFAMILY SSF88713 4 301 2.2E-100 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 JV59_22630 3e604966d4b56971fbbfe4b4bc8968d5 307 Gene3D G3DSA:3.20.20.370 1 307 5.1E-115 T 14-10-2018 JV59_22630 3e604966d4b56971fbbfe4b4bc8968d5 307 Pfam PF01522 Polysaccharide deacetylase 75 182 4.6E-18 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 JV59_30220 b90b9a89aab4821050984dd9cf786851 817 Pfam PF12704 MacB-like periplasmic core domain 465 655 8.1E-7 T 14-10-2018 IPR025857 MacB-like periplasmic core domain JV59_30220 b90b9a89aab4821050984dd9cf786851 817 Pfam PF02687 FtsX-like permease family 715 808 6.1E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JV59_19030 e31614742c20dc1592a85c23012cd1b9 310 Pfam PF00072 Response regulator receiver domain 3 110 1.9E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_19030 e31614742c20dc1592a85c23012cd1b9 310 Gene3D G3DSA:3.40.50.2300 1 133 1.8E-34 T 14-10-2018 JV59_19030 e31614742c20dc1592a85c23012cd1b9 310 SMART SM00448 1 113 2.0E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_19030 e31614742c20dc1592a85c23012cd1b9 310 SUPERFAMILY SSF55073 149 309 3.3E-44 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_19030 e31614742c20dc1592a85c23012cd1b9 310 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 140 308 2.0E-47 T 14-10-2018 IPR000160 GGDEF domain JV59_19030 e31614742c20dc1592a85c23012cd1b9 310 Pfam PF00990 Diguanylate cyclase, GGDEF domain 145 305 2.7E-46 T 14-10-2018 IPR000160 GGDEF domain JV59_19030 e31614742c20dc1592a85c23012cd1b9 310 Gene3D G3DSA:3.30.70.270 134 309 3.0E-54 T 14-10-2018 JV59_19030 e31614742c20dc1592a85c23012cd1b9 310 SUPERFAMILY SSF52172 1 140 7.68E-38 T 14-10-2018 IPR011006 CheY-like superfamily JV59_19030 e31614742c20dc1592a85c23012cd1b9 310 SMART SM00267 133 309 1.1E-54 T 14-10-2018 IPR000160 GGDEF domain JV59_27965 9b53c880f7e1c6ea4a09cf46764c10ae 357 Hamap MF_02040 Iron-sulfur cluster carrier protein. 88 337 36.413 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein JV59_27965 9b53c880f7e1c6ea4a09cf46764c10ae 357 ProSitePatterns PS01215 Mrp family signature. 200 216 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 JV59_27965 9b53c880f7e1c6ea4a09cf46764c10ae 357 SUPERFAMILY SSF52540 95 342 6.61E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_27965 9b53c880f7e1c6ea4a09cf46764c10ae 357 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 93 336 1.7E-100 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 JV59_27965 9b53c880f7e1c6ea4a09cf46764c10ae 357 Gene3D G3DSA:3.40.50.300 82 335 2.7E-84 T 14-10-2018 JV59_23255 d2473dea5decb835df26d19db17a9df7 222 Gene3D G3DSA:1.10.10.10 148 215 4.8E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_23255 d2473dea5decb835df26d19db17a9df7 222 Pfam PF13545 Crp-like helix-turn-helix domain 158 213 1.4E-8 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 JV59_23255 d2473dea5decb835df26d19db17a9df7 222 SUPERFAMILY SSF51206 16 148 1.7E-28 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JV59_23255 d2473dea5decb835df26d19db17a9df7 222 Gene3D G3DSA:2.60.120.10 3 147 3.9E-25 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_23255 d2473dea5decb835df26d19db17a9df7 222 SUPERFAMILY SSF46785 154 213 3.64E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_23255 d2473dea5decb835df26d19db17a9df7 222 SMART SM00100 16 137 8.0E-14 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JV59_23255 d2473dea5decb835df26d19db17a9df7 222 Pfam PF00027 Cyclic nucleotide-binding domain 36 122 3.1E-18 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JV59_33480 1f35860587c56760859df91602a58957 282 Pfam PF04116 Fatty acid hydroxylase superfamily 92 226 2.5E-31 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 JV59_36655 29aa989bc01e7923aacc824c75ab1c04 942 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 645 5.8E-220 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_36655 29aa989bc01e7923aacc824c75ab1c04 942 Gene3D G3DSA:1.10.730.20 645 934 8.9E-86 T 14-10-2018 JV59_36655 29aa989bc01e7923aacc824c75ab1c04 942 SUPERFAMILY SSF52374 4 652 8.65E-139 T 14-10-2018 JV59_36655 29aa989bc01e7923aacc824c75ab1c04 942 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_36655 29aa989bc01e7923aacc824c75ab1c04 942 Pfam PF08264 Anticodon-binding domain of tRNA 690 846 1.7E-25 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 JV59_36655 29aa989bc01e7923aacc824c75ab1c04 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.1E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 JV59_36655 29aa989bc01e7923aacc824c75ab1c04 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 5.1E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 JV59_36655 29aa989bc01e7923aacc824c75ab1c04 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 406 421 5.1E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 JV59_36655 29aa989bc01e7923aacc824c75ab1c04 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 531 544 5.1E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 JV59_36655 29aa989bc01e7923aacc824c75ab1c04 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 566 575 5.1E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 JV59_36655 29aa989bc01e7923aacc824c75ab1c04 942 Gene3D G3DSA:3.40.50.620 25 634 2.6E-241 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_36655 29aa989bc01e7923aacc824c75ab1c04 942 Pfam PF06827 Zinc finger found in FPG and IleRS 903 930 5.0E-6 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 JV59_36655 29aa989bc01e7923aacc824c75ab1c04 942 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 848 5.2E-294 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 JV59_36655 29aa989bc01e7923aacc824c75ab1c04 942 SUPERFAMILY SSF50677 203 408 2.41E-54 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 JV59_36655 29aa989bc01e7923aacc824c75ab1c04 942 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 933 21.405 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 JV59_36655 29aa989bc01e7923aacc824c75ab1c04 942 Gene3D G3DSA:3.90.740.10 195 413 2.6E-241 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 JV59_36655 29aa989bc01e7923aacc824c75ab1c04 942 SUPERFAMILY SSF47323 657 933 1.1E-75 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_27010 f0c0d82c061ebfcb3b0fa44bafe94c2f 112 SUPERFAMILY SSF141488 29 110 4.05E-14 T 14-10-2018 IPR036328 C-type lysozyme inhibitor superfamily JV59_27010 f0c0d82c061ebfcb3b0fa44bafe94c2f 112 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 34 107 2.5E-16 T 14-10-2018 IPR018660 C-type lysozyme inhibitor JV59_27010 f0c0d82c061ebfcb3b0fa44bafe94c2f 112 Gene3D G3DSA:2.40.128.200 28 112 6.3E-17 T 14-10-2018 IPR036328 C-type lysozyme inhibitor superfamily JV59_36165 baa8a9360649e114fc2351bd90740f39 548 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 38 547 8.2E-263 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 JV59_36165 baa8a9360649e114fc2351bd90740f39 548 Gene3D G3DSA:3.20.20.360 17 426 2.1E-189 T 14-10-2018 JV59_36165 baa8a9360649e114fc2351bd90740f39 548 PIRSF PIRSF001363 16 548 2.3E-252 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 JV59_36165 baa8a9360649e114fc2351bd90740f39 548 Gene3D G3DSA:1.20.1220.12 427 548 3.4E-50 T 14-10-2018 JV59_36165 baa8a9360649e114fc2351bd90740f39 548 SUPERFAMILY SSF51645 22 547 8.11E-187 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 JV59_36165 baa8a9360649e114fc2351bd90740f39 548 ProSitePatterns PS00510 Malate synthase signature. 281 296 - T 14-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 JV59_36165 baa8a9360649e114fc2351bd90740f39 548 Pfam PF01274 Malate synthase 27 547 2.6E-202 T 14-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 JV59_23915 39f54db03b30609f79e4289f14392fda 298 SUPERFAMILY SSF46785 1 111 9.58E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_23915 39f54db03b30609f79e4289f14392fda 298 SUPERFAMILY SSF53850 89 292 6.98E-50 T 14-10-2018 JV59_23915 39f54db03b30609f79e4289f14392fda 298 Pfam PF03466 LysR substrate binding domain 89 287 5.7E-48 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_23915 39f54db03b30609f79e4289f14392fda 298 Gene3D G3DSA:1.10.10.10 1 86 7.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_23915 39f54db03b30609f79e4289f14392fda 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.6E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_23915 39f54db03b30609f79e4289f14392fda 298 Gene3D G3DSA:3.40.190.290 90 290 5.3E-72 T 14-10-2018 JV59_23655 729f9d8d36256a1a6bb1965a62739164 230 SUPERFAMILY SSF52172 2 128 8.97E-36 T 14-10-2018 IPR011006 CheY-like superfamily JV59_23655 729f9d8d36256a1a6bb1965a62739164 230 Gene3D G3DSA:3.40.50.2300 3 133 1.7E-33 T 14-10-2018 JV59_23655 729f9d8d36256a1a6bb1965a62739164 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 224 2.2E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_23655 729f9d8d36256a1a6bb1965a62739164 230 SUPERFAMILY SSF46894 126 225 5.39E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_23655 729f9d8d36256a1a6bb1965a62739164 230 Gene3D G3DSA:1.10.10.10 134 228 1.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_23655 729f9d8d36256a1a6bb1965a62739164 230 Pfam PF00072 Response regulator receiver domain 7 115 2.6E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_23655 729f9d8d36256a1a6bb1965a62739164 230 SMART SM00448 5 116 7.2E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_23655 729f9d8d36256a1a6bb1965a62739164 230 SMART SM00862 150 224 3.1E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_37275 e295244c6bef2ec912a0981c71c572d7 167 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 11 156 4.5E-49 T 14-10-2018 IPR008136 CinA, C-terminal JV59_37275 e295244c6bef2ec912a0981c71c572d7 167 Gene3D G3DSA:3.90.950.20 1 159 7.0E-59 T 14-10-2018 IPR036653 CinA-like, C-terminal JV59_37275 e295244c6bef2ec912a0981c71c572d7 167 SUPERFAMILY SSF142433 4 160 2.62E-56 T 14-10-2018 IPR036653 CinA-like, C-terminal JV59_37275 e295244c6bef2ec912a0981c71c572d7 167 Pfam PF02464 Competence-damaged protein 5 158 8.5E-59 T 14-10-2018 IPR008136 CinA, C-terminal JV59_30865 0a715e0e743487178841345858cab457 173 SUPERFAMILY SSF88946 4 100 2.51E-18 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JV59_30865 0a715e0e743487178841345858cab457 173 Gene3D G3DSA:1.10.1740.10 8 86 3.1E-18 T 14-10-2018 JV59_30865 0a715e0e743487178841345858cab457 173 Pfam PF04542 Sigma-70 region 2 27 93 6.7E-11 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JV59_30865 0a715e0e743487178841345858cab457 173 Pfam PF08281 Sigma-70, region 4 117 167 3.8E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JV59_30865 0a715e0e743487178841345858cab457 173 SUPERFAMILY SSF88659 117 172 5.45E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JV59_30865 0a715e0e743487178841345858cab457 173 Gene3D G3DSA:1.10.10.10 87 172 6.3E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_30865 0a715e0e743487178841345858cab457 173 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 171 4.0E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JV59_36865 72b354c4a7c220ec4b183d164d9923d0 254 Pfam PF16537 Type II secretion system protein B 189 248 9.7E-24 T 14-10-2018 IPR032389 Type II secretion system protein B JV59_23770 68bf4424a993f8efa1fe9971f13f1e05 87 Pfam PF11747 Killing trait 7 72 5.4E-29 T 14-10-2018 IPR021070 Killing trait, RebB JV59_02340 a38241ac2491d050731861473160554e 454 Pfam PF00209 Sodium:neurotransmitter symporter family 10 131 4.7E-21 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JV59_02340 a38241ac2491d050731861473160554e 454 Pfam PF00209 Sodium:neurotransmitter symporter family 154 452 2.3E-25 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JV59_02340 a38241ac2491d050731861473160554e 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 1.5E-10 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JV59_02340 a38241ac2491d050731861473160554e 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 1.5E-10 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JV59_02340 a38241ac2491d050731861473160554e 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 314 333 1.5E-10 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JV59_02340 a38241ac2491d050731861473160554e 454 SUPERFAMILY SSF161070 10 453 4.71E-118 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 JV59_38865 3838a1d68d2a24cab0fa9280c802b558 404 Pfam PF05134 Type II secretion system (T2SS), protein L 5 242 1.3E-64 T 14-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain JV59_38865 3838a1d68d2a24cab0fa9280c802b558 404 SUPERFAMILY SSF53067 3 144 3.5E-34 T 14-10-2018 JV59_38865 3838a1d68d2a24cab0fa9280c802b558 404 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 5 402 1.8E-87 T 14-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 JV59_38865 3838a1d68d2a24cab0fa9280c802b558 404 PIRSF PIRSF015761 4 404 1.1E-30 T 14-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 JV59_38865 3838a1d68d2a24cab0fa9280c802b558 404 Gene3D G3DSA:3.30.1360.100 318 404 7.7E-27 T 14-10-2018 JV59_38865 3838a1d68d2a24cab0fa9280c802b558 404 Gene3D G3DSA:3.30.420.380 3 239 1.0E-88 T 14-10-2018 JV59_38865 3838a1d68d2a24cab0fa9280c802b558 404 Pfam PF12693 GspL periplasmic domain 247 403 1.0E-39 T 14-10-2018 IPR025691 GspL periplasmic domain JV59_38865 3838a1d68d2a24cab0fa9280c802b558 404 Gene3D G3DSA:3.30.420.370 142 217 1.0E-88 T 14-10-2018 JV59_38865 3838a1d68d2a24cab0fa9280c802b558 404 SUPERFAMILY SSF53067 147 240 1.02E-21 T 14-10-2018 JV59_36280 de0398dbef4e6fa61ab460ae724359f2 791 Gene3D G3DSA:3.30.1390.40 487 518 1.4E-257 T 14-10-2018 JV59_36280 de0398dbef4e6fa61ab460ae724359f2 791 Gene3D G3DSA:2.70.98.50 31 262 7.8E-97 T 14-10-2018 JV59_36280 de0398dbef4e6fa61ab460ae724359f2 791 Gene3D G3DSA:1.10.287.100 263 301 1.9E-17 T 14-10-2018 JV59_36280 de0398dbef4e6fa61ab460ae724359f2 791 Pfam PF01204 Trehalase 421 768 1.8E-11 T 14-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 JV59_36280 de0398dbef4e6fa61ab460ae724359f2 791 Gene3D G3DSA:1.50.10.10 308 786 1.4E-257 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 JV59_36280 de0398dbef4e6fa61ab460ae724359f2 791 SUPERFAMILY SSF48208 275 786 6.04E-83 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 JV59_01605 786138f63efd9abfeda09602385f0fcf 470 SUPERFAMILY SSF53738 2 187 2.55E-39 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_01605 786138f63efd9abfeda09602385f0fcf 470 SUPERFAMILY SSF53738 250 379 1.49E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_01605 786138f63efd9abfeda09602385f0fcf 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 3.0E-25 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_01605 786138f63efd9abfeda09602385f0fcf 470 Gene3D G3DSA:3.40.120.10 171 365 1.5E-58 T 14-10-2018 JV59_01605 786138f63efd9abfeda09602385f0fcf 470 Gene3D G3DSA:3.30.310.50 369 470 6.4E-16 T 14-10-2018 JV59_01605 786138f63efd9abfeda09602385f0fcf 470 Gene3D G3DSA:3.40.120.10 1 170 1.8E-45 T 14-10-2018 JV59_01605 786138f63efd9abfeda09602385f0fcf 470 SUPERFAMILY SSF55957 374 457 3.4E-17 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_01605 786138f63efd9abfeda09602385f0fcf 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 419 464 7.3E-9 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_01605 786138f63efd9abfeda09602385f0fcf 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 135 4.1E-36 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_01605 786138f63efd9abfeda09602385f0fcf 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_01605 786138f63efd9abfeda09602385f0fcf 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 2.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_01605 786138f63efd9abfeda09602385f0fcf 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 2.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_01605 786138f63efd9abfeda09602385f0fcf 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 2.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_01605 786138f63efd9abfeda09602385f0fcf 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 3.8E-24 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_01605 786138f63efd9abfeda09602385f0fcf 470 Gene3D G3DSA:3.40.120.10 263 368 1.5E-58 T 14-10-2018 JV59_26085 4bae5cee2baa3172ec5658be1809122c 264 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 166 252 5.6E-29 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain JV59_26085 4bae5cee2baa3172ec5658be1809122c 264 Gene3D G3DSA:3.10.50.40 149 262 3.1E-42 T 14-10-2018 JV59_26085 4bae5cee2baa3172ec5658be1809122c 264 SUPERFAMILY SSF54534 47 254 1.3E-63 T 14-10-2018 JV59_26085 4bae5cee2baa3172ec5658be1809122c 264 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 38 158 1.2E-33 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 JV59_26085 4bae5cee2baa3172ec5658be1809122c 264 Gene3D G3DSA:1.10.287.460 31 148 5.5E-31 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 JV59_20215 7df489a2650ec8fb5b7a757962bc48ec 503 Pfam PF05231 MASE1 16 276 1.2E-19 T 14-10-2018 IPR007895 MASE1 JV59_20215 7df489a2650ec8fb5b7a757962bc48ec 503 Gene3D G3DSA:3.30.565.10 369 502 2.2E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_20215 7df489a2650ec8fb5b7a757962bc48ec 503 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 411 501 7.9E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_20215 7df489a2650ec8fb5b7a757962bc48ec 503 Pfam PF07730 Histidine kinase 304 368 4.8E-12 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 JV59_20215 7df489a2650ec8fb5b7a757962bc48ec 503 SMART SM00387 408 503 3.6E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_20215 7df489a2650ec8fb5b7a757962bc48ec 503 SUPERFAMILY SSF55874 371 501 2.1E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_16360 23b86ee2687a5ca85f05100d878bbdcb 200 Gene3D G3DSA:2.60.370.10 56 189 3.7E-43 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_16360 23b86ee2687a5ca85f05100d878bbdcb 200 PIRSF PIRSF005413 1 189 3.6E-67 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_16360 23b86ee2687a5ca85f05100d878bbdcb 200 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 29 173 2.9E-49 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_16360 23b86ee2687a5ca85f05100d878bbdcb 200 SUPERFAMILY SSF110111 55 176 3.27E-45 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_38605 5eb355154e577cba0615388ee91f7540 424 Gene3D G3DSA:3.40.50.11720 34 211 7.2E-49 T 14-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 JV59_38605 5eb355154e577cba0615388ee91f7540 424 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 213 1.5E-61 T 14-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 JV59_38605 5eb355154e577cba0615388ee91f7540 424 SUPERFAMILY SSF53756 55 408 8.06E-12 T 14-10-2018 JV59_38605 5eb355154e577cba0615388ee91f7540 424 Gene3D G3DSA:3.40.50.2000 223 407 1.3E-57 T 14-10-2018 JV59_02245 310db1fc6296ed619ffb5b6f978bca19 461 Pfam PF07690 Major Facilitator Superfamily 25 398 9.3E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_02245 310db1fc6296ed619ffb5b6f978bca19 461 Gene3D G3DSA:1.20.1250.20 18 226 1.0E-9 T 14-10-2018 JV59_02245 310db1fc6296ed619ffb5b6f978bca19 461 SUPERFAMILY SSF103473 12 437 3.27E-35 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_02245 310db1fc6296ed619ffb5b6f978bca19 461 Gene3D G3DSA:1.20.1250.20 244 442 3.3E-7 T 14-10-2018 JV59_29210 947ed7b8287efe6a861aa0fd033fdb2f 185 Gene3D G3DSA:1.20.120.1760 2 180 3.1E-17 T 14-10-2018 JV59_29210 947ed7b8287efe6a861aa0fd033fdb2f 185 PIRSF PIRSF000847 1 184 1.8E-45 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 JV59_29210 947ed7b8287efe6a861aa0fd033fdb2f 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JV59_29210 947ed7b8287efe6a861aa0fd033fdb2f 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 8.3E-55 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 JV59_29210 947ed7b8287efe6a861aa0fd033fdb2f 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 1.4E-17 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JV59_25165 54e7c44f898c9e80d401de710ad572a4 462 Pfam PF03743 Bacterial conjugation TrbI-like protein 208 407 5.0E-24 T 14-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI JV59_29555 84ca36e8147a2f7a2bc3572c557878f2 180 Pfam PF13505 Outer membrane protein beta-barrel domain 5 180 8.7E-14 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel JV59_29555 84ca36e8147a2f7a2bc3572c557878f2 180 SUPERFAMILY SSF56925 21 180 3.14E-17 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JV59_29555 84ca36e8147a2f7a2bc3572c557878f2 180 Gene3D G3DSA:2.40.160.20 19 180 1.3E-17 T 14-10-2018 JV59_39145 8c759a9de6a0ff19ea2d15f5e5c60aeb 507 Gene3D G3DSA:3.30.230.10 1 186 4.8E-5 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JV59_39145 8c759a9de6a0ff19ea2d15f5e5c60aeb 507 SUPERFAMILY SSF54211 2 169 4.55E-30 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JV59_39145 8c759a9de6a0ff19ea2d15f5e5c60aeb 507 SMART SM00382 210 390 4.0E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_39145 8c759a9de6a0ff19ea2d15f5e5c60aeb 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 2.5E-46 T 14-10-2018 JV59_39145 8c759a9de6a0ff19ea2d15f5e5c60aeb 507 SUPERFAMILY SSF52540 189 501 4.91E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_39145 8c759a9de6a0ff19ea2d15f5e5c60aeb 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 2.4E-210 T 14-10-2018 IPR004482 Mg chelatase-related protein JV59_39145 8c759a9de6a0ff19ea2d15f5e5c60aeb 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 2.4E-30 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain JV59_39145 8c759a9de6a0ff19ea2d15f5e5c60aeb 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 391 1.1E-89 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain JV59_39145 8c759a9de6a0ff19ea2d15f5e5c60aeb 507 Gene3D G3DSA:3.40.50.300 189 500 4.2E-55 T 14-10-2018 JV59_39145 8c759a9de6a0ff19ea2d15f5e5c60aeb 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 7.6E-5 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 JV59_39145 8c759a9de6a0ff19ea2d15f5e5c60aeb 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 7.6E-5 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 JV59_39145 8c759a9de6a0ff19ea2d15f5e5c60aeb 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 7.6E-5 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 JV59_16950 82eb90ab4e168b7b44cf807ef39414ff 343 Pfam PF00267 Gram-negative porin 47 334 3.0E-10 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 JV59_16950 82eb90ab4e168b7b44cf807ef39414ff 343 Gene3D G3DSA:2.40.160.10 22 342 2.8E-49 T 14-10-2018 IPR023614 Porin domain superfamily JV59_16950 82eb90ab4e168b7b44cf807ef39414ff 343 SUPERFAMILY SSF56935 22 341 2.15E-46 T 14-10-2018 JV59_16950 82eb90ab4e168b7b44cf807ef39414ff 343 PRINTS PR00183 E.coli/Salmonella-type porin signature 94 116 3.0E-7 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 JV59_16950 82eb90ab4e168b7b44cf807ef39414ff 343 PRINTS PR00183 E.coli/Salmonella-type porin signature 150 172 3.0E-7 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 JV59_16950 82eb90ab4e168b7b44cf807ef39414ff 343 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 3.0E-7 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 JV59_16950 82eb90ab4e168b7b44cf807ef39414ff 343 PRINTS PR00183 E.coli/Salmonella-type porin signature 307 326 3.0E-7 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 JV59_39630 c0d0a4bcf0d3dabfb856d1f64f55d69c 348 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 2.9E-141 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 JV59_39630 c0d0a4bcf0d3dabfb856d1f64f55d69c 348 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 JV59_39630 c0d0a4bcf0d3dabfb856d1f64f55d69c 348 PIRSF PIRSF001415 2 336 1.4E-152 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 JV59_39630 c0d0a4bcf0d3dabfb856d1f64f55d69c 348 SMART SM01004 9 333 1.7E-242 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 JV59_39630 c0d0a4bcf0d3dabfb856d1f64f55d69c 348 SUPERFAMILY SSF51569 7 335 2.78E-144 T 14-10-2018 JV59_39630 c0d0a4bcf0d3dabfb856d1f64f55d69c 348 Gene3D G3DSA:3.20.20.70 2 337 2.4E-147 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_39630 c0d0a4bcf0d3dabfb856d1f64f55d69c 348 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 3.2E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 JV59_39630 c0d0a4bcf0d3dabfb856d1f64f55d69c 348 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 3.2E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 JV59_39630 c0d0a4bcf0d3dabfb856d1f64f55d69c 348 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 3.2E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 JV59_39630 c0d0a4bcf0d3dabfb856d1f64f55d69c 348 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 3.2E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 JV59_39630 c0d0a4bcf0d3dabfb856d1f64f55d69c 348 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 3.2E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 JV59_39630 c0d0a4bcf0d3dabfb856d1f64f55d69c 348 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 3.2E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 JV59_37100 49da9f0ede5f2c505007a062983a6c1b 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 60.712 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 JV59_37100 49da9f0ede5f2c505007a062983a6c1b 466 SUPERFAMILY SSF53732 1 465 7.98E-166 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 JV59_37100 49da9f0ede5f2c505007a062983a6c1b 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 JV59_37100 49da9f0ede5f2c505007a062983a6c1b 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 2.4E-160 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JV59_37100 49da9f0ede5f2c505007a062983a6c1b 466 PRINTS PR00415 Aconitase family signature 209 222 2.9E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JV59_37100 49da9f0ede5f2c505007a062983a6c1b 466 PRINTS PR00415 Aconitase family signature 82 95 2.9E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JV59_37100 49da9f0ede5f2c505007a062983a6c1b 466 PRINTS PR00415 Aconitase family signature 286 300 2.9E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JV59_37100 49da9f0ede5f2c505007a062983a6c1b 466 PRINTS PR00415 Aconitase family signature 133 148 2.9E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JV59_37100 49da9f0ede5f2c505007a062983a6c1b 466 PRINTS PR00415 Aconitase family signature 119 132 2.9E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JV59_37100 49da9f0ede5f2c505007a062983a6c1b 466 PRINTS PR00415 Aconitase family signature 108 116 2.9E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JV59_37100 49da9f0ede5f2c505007a062983a6c1b 466 PRINTS PR00415 Aconitase family signature 195 208 2.9E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JV59_37100 49da9f0ede5f2c505007a062983a6c1b 466 PRINTS PR00415 Aconitase family signature 399 412 2.9E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JV59_37100 49da9f0ede5f2c505007a062983a6c1b 466 PRINTS PR00415 Aconitase family signature 343 354 2.9E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JV59_37100 49da9f0ede5f2c505007a062983a6c1b 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 2.7E-265 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 JV59_37100 49da9f0ede5f2c505007a062983a6c1b 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 JV59_37100 49da9f0ede5f2c505007a062983a6c1b 466 Gene3D G3DSA:3.30.499.10 327 466 7.8E-50 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 JV59_37100 49da9f0ede5f2c505007a062983a6c1b 466 Gene3D G3DSA:3.30.499.20 4 286 4.0E-99 T 14-10-2018 JV59_21815 992d14d785a29910fcf72cbc9d2e6190 445 SUPERFAMILY SSF52540 76 399 7.05E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_21815 992d14d785a29910fcf72cbc9d2e6190 445 Gene3D G3DSA:3.40.50.300 191 439 2.2E-69 T 14-10-2018 JV59_21815 992d14d785a29910fcf72cbc9d2e6190 445 Gene3D G3DSA:3.30.450.380 13 189 3.9E-41 T 14-10-2018 JV59_21815 992d14d785a29910fcf72cbc9d2e6190 445 Pfam PF00437 Type II/IV secretion system protein 94 370 3.1E-80 T 14-10-2018 IPR001482 Type II/IV secretion system protein JV59_25085 33a13f1fb933c0b57c5d9867d214aa39 161 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 110 115 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site JV59_25085 33a13f1fb933c0b57c5d9867d214aa39 161 SUPERFAMILY SSF102712 58 128 3.53E-6 T 14-10-2018 JV59_25085 33a13f1fb933c0b57c5d9867d214aa39 161 Pfam PF04002 RadC-like JAB domain 41 159 4.3E-35 T 14-10-2018 IPR025657 RadC-like JAB domain JV59_25085 33a13f1fb933c0b57c5d9867d214aa39 161 Gene3D G3DSA:3.40.140.10 38 160 5.3E-35 T 14-10-2018 JV59_30565 807e28aafa88e0b62ea770fbd0490488 308 Gene3D G3DSA:1.10.10.10 3 88 1.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_30565 807e28aafa88e0b62ea770fbd0490488 308 Gene3D G3DSA:3.40.190.290 91 302 3.9E-55 T 14-10-2018 JV59_30565 807e28aafa88e0b62ea770fbd0490488 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.8E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_30565 807e28aafa88e0b62ea770fbd0490488 308 Pfam PF03466 LysR substrate binding domain 90 302 3.9E-34 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_30565 807e28aafa88e0b62ea770fbd0490488 308 SUPERFAMILY SSF46785 4 112 5.89E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_30565 807e28aafa88e0b62ea770fbd0490488 308 SUPERFAMILY SSF53850 89 304 2.53E-32 T 14-10-2018 JV59_36205 244faaec3f8233faa0e16798721e6436 631 SUPERFAMILY SSF55804 1 145 5.49E-40 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 JV59_36205 244faaec3f8233faa0e16798721e6436 631 SUPERFAMILY SSF52794 163 258 7.5E-35 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 JV59_36205 244faaec3f8233faa0e16798721e6436 631 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 269 615 3.0E-87 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 JV59_36205 244faaec3f8233faa0e16798721e6436 631 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 146 1.4E-35 T 14-10-2018 IPR002178 PTS EIIA type-2 domain JV59_36205 244faaec3f8233faa0e16798721e6436 631 Gene3D G3DSA:3.40.50.2300 152 262 3.2E-39 T 14-10-2018 JV59_36205 244faaec3f8233faa0e16798721e6436 631 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 166 254 2.8E-16 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 JV59_36205 244faaec3f8233faa0e16798721e6436 631 Gene3D G3DSA:3.40.930.10 1 147 6.9E-44 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 JV59_36205 244faaec3f8233faa0e16798721e6436 631 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 5 131 1.5E-42 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 JV59_36205 244faaec3f8233faa0e16798721e6436 631 Pfam PF02378 Phosphotransferase system, EIIC 288 563 1.9E-15 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 JV59_36205 244faaec3f8233faa0e16798721e6436 631 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 164 246 1.9E-29 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 JV59_15965 47594c19533c38a0a97db08d173efb13 536 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 458 1.8E-82 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain JV59_15965 47594c19533c38a0a97db08d173efb13 536 Gene3D G3DSA:3.40.190.10 39 517 1.1E-161 T 14-10-2018 JV59_15965 47594c19533c38a0a97db08d173efb13 536 Gene3D G3DSA:3.90.76.10 68 191 1.1E-161 T 14-10-2018 JV59_15965 47594c19533c38a0a97db08d173efb13 536 Gene3D G3DSA:3.10.105.10 294 505 1.1E-161 T 14-10-2018 JV59_15965 47594c19533c38a0a97db08d173efb13 536 PIRSF PIRSF002741 1 536 1.4E-100 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 JV59_15965 47594c19533c38a0a97db08d173efb13 536 SUPERFAMILY SSF53850 32 529 6.36E-127 T 14-10-2018 JV59_21690 9f4d0167f16edef4cc6f93738023c311 492 ProSitePatterns PS00018 EF-hand calcium-binding domain. 452 464 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site JV59_21690 9f4d0167f16edef4cc6f93738023c311 492 SUPERFAMILY SSF47473 450 488 3.04E-6 T 14-10-2018 IPR011992 EF-hand domain pair JV59_21690 9f4d0167f16edef4cc6f93738023c311 492 Pfam PF13202 EF hand 470 487 0.015 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 JV59_21690 9f4d0167f16edef4cc6f93738023c311 492 Pfam PF13202 EF hand 451 464 0.015 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 JV59_21690 9f4d0167f16edef4cc6f93738023c311 492 Gene3D G3DSA:1.10.238.10 449 490 3.4E-7 T 14-10-2018 JV59_21690 9f4d0167f16edef4cc6f93738023c311 492 Pfam PF07603 Protein of unknown function (DUF1566) 242 359 2.3E-21 T 14-10-2018 IPR011460 Protein of unknown function DUF1566 JV59_21690 9f4d0167f16edef4cc6f93738023c311 492 Pfam PF07603 Protein of unknown function (DUF1566) 72 226 8.8E-21 T 14-10-2018 IPR011460 Protein of unknown function DUF1566 JV59_09510 596d132ff00ed51397467c75fb00c5e9 256 SMART SM00062 26 252 2.1E-70 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_09510 596d132ff00ed51397467c75fb00c5e9 256 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site JV59_09510 596d132ff00ed51397467c75fb00c5e9 256 Gene3D G3DSA:3.40.190.10 112 209 3.2E-73 T 14-10-2018 JV59_09510 596d132ff00ed51397467c75fb00c5e9 256 Gene3D G3DSA:3.40.190.10 28 248 3.2E-73 T 14-10-2018 JV59_09510 596d132ff00ed51397467c75fb00c5e9 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 250 1.1E-62 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_09510 596d132ff00ed51397467c75fb00c5e9 256 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 6 249 8.7E-82 T 14-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 JV59_09510 596d132ff00ed51397467c75fb00c5e9 256 SMART SM00079 26 251 2.8E-4 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 JV59_09510 596d132ff00ed51397467c75fb00c5e9 256 SUPERFAMILY SSF53850 1 253 2.34E-70 T 14-10-2018 JV59_30720 11ae8c82500f0eafb6f50227b9a10996 696 Gene3D G3DSA:3.10.560.10 284 373 3.1E-17 T 14-10-2018 JV59_30720 11ae8c82500f0eafb6f50227b9a10996 696 Gene3D G3DSA:3.10.560.10 478 572 1.5E-17 T 14-10-2018 JV59_30720 11ae8c82500f0eafb6f50227b9a10996 696 Gene3D G3DSA:3.10.560.10 383 469 1.5E-11 T 14-10-2018 JV59_30720 11ae8c82500f0eafb6f50227b9a10996 696 Gene3D G3DSA:3.10.560.10 193 283 3.9E-18 T 14-10-2018 JV59_30720 11ae8c82500f0eafb6f50227b9a10996 696 Gene3D G3DSA:3.10.560.10 578 667 1.6E-18 T 14-10-2018 JV59_30720 11ae8c82500f0eafb6f50227b9a10996 696 Gene3D G3DSA:3.10.560.10 87 177 1.4E-14 T 14-10-2018 JV59_30720 11ae8c82500f0eafb6f50227b9a10996 696 Pfam PF10531 SLBB domain 207 249 1.7E-4 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_30720 11ae8c82500f0eafb6f50227b9a10996 696 Pfam PF10531 SLBB domain 491 534 5.3E-6 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_30720 11ae8c82500f0eafb6f50227b9a10996 696 Pfam PF10531 SLBB domain 586 629 4.4E-9 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_30720 11ae8c82500f0eafb6f50227b9a10996 696 Pfam PF10531 SLBB domain 294 346 8.0E-12 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_30720 11ae8c82500f0eafb6f50227b9a10996 696 Pfam PF10531 SLBB domain 391 439 3.8E-5 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_30720 11ae8c82500f0eafb6f50227b9a10996 696 Pfam PF10531 SLBB domain 100 143 0.008 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_30720 11ae8c82500f0eafb6f50227b9a10996 696 Pfam PF02563 Polysaccharide biosynthesis/export protein 23 86 2.2E-11 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 JV59_23955 8b712f55badcf22352ffde5ca1f87e02 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.6E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 JV59_23955 8b712f55badcf22352ffde5ca1f87e02 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.6E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 JV59_23955 8b712f55badcf22352ffde5ca1f87e02 253 SMART SM00420 6 58 1.1E-16 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 JV59_23955 8b712f55badcf22352ffde5ca1f87e02 253 SUPERFAMILY SSF100950 76 235 2.09E-21 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JV59_23955 8b712f55badcf22352ffde5ca1f87e02 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 9.4E-18 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 JV59_23955 8b712f55badcf22352ffde5ca1f87e02 253 Gene3D G3DSA:1.10.10.10 1 55 1.0E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_23955 8b712f55badcf22352ffde5ca1f87e02 253 SMART SM01134 72 233 4.9E-45 T 14-10-2018 JV59_23955 8b712f55badcf22352ffde5ca1f87e02 253 Gene3D G3DSA:3.30.750.70 69 134 3.6E-6 T 14-10-2018 JV59_23955 8b712f55badcf22352ffde5ca1f87e02 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 JV59_23955 8b712f55badcf22352ffde5ca1f87e02 253 Pfam PF00455 DeoR C terminal sensor domain 75 231 4.9E-40 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain JV59_23955 8b712f55badcf22352ffde5ca1f87e02 253 SUPERFAMILY SSF46785 2 74 5.75E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_30005 4400ae09e6942a73ab543023ad5ddda6 302 SUPERFAMILY SSF46785 1 84 5.19E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_30005 4400ae09e6942a73ab543023ad5ddda6 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.3E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_30005 4400ae09e6942a73ab543023ad5ddda6 302 Gene3D G3DSA:1.10.10.10 1 87 9.7E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_30005 4400ae09e6942a73ab543023ad5ddda6 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_30005 4400ae09e6942a73ab543023ad5ddda6 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_30005 4400ae09e6942a73ab543023ad5ddda6 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_30005 4400ae09e6942a73ab543023ad5ddda6 302 Gene3D G3DSA:3.40.190.290 91 294 1.9E-58 T 14-10-2018 JV59_30005 4400ae09e6942a73ab543023ad5ddda6 302 Pfam PF03466 LysR substrate binding domain 88 294 4.7E-34 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_30005 4400ae09e6942a73ab543023ad5ddda6 302 SUPERFAMILY SSF53850 89 297 1.13E-35 T 14-10-2018 JV59_39260 062366765682e762608db43e4d55a68a 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 43 4.9E-25 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_39260 062366765682e762608db43e4d55a68a 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 40 1.0E-13 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_39260 062366765682e762608db43e4d55a68a 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_39260 062366765682e762608db43e4d55a68a 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.873 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_39260 062366765682e762608db43e4d55a68a 44 Pfam PF00468 Ribosomal protein L34 1 43 1.2E-23 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_38300 6db4fe4ee14ac6c34805146293c1e55d 246 Gene3D G3DSA:3.10.560.10 147 220 2.8E-15 T 14-10-2018 JV59_38300 6db4fe4ee14ac6c34805146293c1e55d 246 Pfam PF06251 Capsule biosynthesis GfcC 19 241 9.6E-48 T 14-10-2018 IPR010425 Domain of unknown function DUF1017 JV59_02180 d5703a9ae2bf788890b3f7c71f211d9c 406 Gene3D G3DSA:3.30.70.1250 116 237 4.2E-147 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 JV59_02180 d5703a9ae2bf788890b3f7c71f211d9c 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 403 5.7E-173 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 JV59_02180 d5703a9ae2bf788890b3f7c71f211d9c 406 SUPERFAMILY SSF53649 1 406 1.44E-68 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 JV59_02180 d5703a9ae2bf788890b3f7c71f211d9c 406 SUPERFAMILY SSF143856 118 234 9.02E-48 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 JV59_02180 d5703a9ae2bf788890b3f7c71f211d9c 406 Gene3D G3DSA:3.40.720.10 3 406 4.2E-147 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 JV59_02180 d5703a9ae2bf788890b3f7c71f211d9c 406 PIRSF PIRSF001491 1 406 1.7E-158 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 JV59_02180 d5703a9ae2bf788890b3f7c71f211d9c 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 53.595 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 JV59_02180 d5703a9ae2bf788890b3f7c71f211d9c 406 Pfam PF01676 Metalloenzyme superfamily 2 397 1.2E-40 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 JV59_29320 017ecfaca8b454f97af0fff343f82aca 226 Pfam PF02678 Pirin 56 123 3.7E-11 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 JV59_29320 017ecfaca8b454f97af0fff343f82aca 226 SUPERFAMILY SSF51182 23 221 5.0E-33 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JV59_29320 017ecfaca8b454f97af0fff343f82aca 226 Gene3D G3DSA:2.60.120.10 17 226 2.4E-25 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_35505 0ea5a5a97f11dc9f98869adced5cc3f6 588 Gene3D G3DSA:4.10.80.40 548 588 3.7E-23 T 14-10-2018 JV59_35505 0ea5a5a97f11dc9f98869adced5cc3f6 588 Gene3D G3DSA:3.50.50.60 9 416 2.7E-169 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_35505 0ea5a5a97f11dc9f98869adced5cc3f6 588 Gene3D G3DSA:3.90.700.10 246 350 2.7E-169 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_35505 0ea5a5a97f11dc9f98869adced5cc3f6 588 SUPERFAMILY SSF56425 236 356 2.69E-42 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_35505 0ea5a5a97f11dc9f98869adced5cc3f6 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_35505 0ea5a5a97f11dc9f98869adced5cc3f6 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 1.8E-240 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_35505 0ea5a5a97f11dc9f98869adced5cc3f6 588 Pfam PF00890 FAD binding domain 9 405 1.5E-117 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_35505 0ea5a5a97f11dc9f98869adced5cc3f6 588 SUPERFAMILY SSF46977 452 588 6.8E-46 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_35505 0ea5a5a97f11dc9f98869adced5cc3f6 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 5.0E-36 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_35505 0ea5a5a97f11dc9f98869adced5cc3f6 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 8.4E-274 T 14-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_35505 0ea5a5a97f11dc9f98869adced5cc3f6 588 SUPERFAMILY SSF51905 5 443 1.46E-71 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_35505 0ea5a5a97f11dc9f98869adced5cc3f6 588 PIRSF PIRSF000171 1 580 1.3E-47 T 14-10-2018 JV59_35505 0ea5a5a97f11dc9f98869adced5cc3f6 588 Gene3D G3DSA:1.20.58.100 431 547 9.2E-38 T 14-10-2018 JV59_33615 c3ba49de99a6f9411d160fc039b5ba37 165 SMART SM00448 4 125 4.5E-8 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_33615 c3ba49de99a6f9411d160fc039b5ba37 165 Gene3D G3DSA:3.40.50.2300 3 142 8.2E-18 T 14-10-2018 JV59_33615 c3ba49de99a6f9411d160fc039b5ba37 165 SUPERFAMILY SSF52172 1 142 1.34E-18 T 14-10-2018 IPR011006 CheY-like superfamily JV59_33615 c3ba49de99a6f9411d160fc039b5ba37 165 Pfam PF00072 Response regulator receiver domain 6 125 3.7E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_01050 4e6ad58d3156eefc9e680849a5b636cd 384 Gene3D G3DSA:3.30.300.10 11 270 2.6E-178 T 14-10-2018 JV59_01050 4e6ad58d3156eefc9e680849a5b636cd 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JV59_01050 4e6ad58d3156eefc9e680849a5b636cd 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 58.834 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JV59_01050 4e6ad58d3156eefc9e680849a5b636cd 384 PIRSF PIRSF000497 1 381 1.5E-173 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JV59_01050 4e6ad58d3156eefc9e680849a5b636cd 384 Gene3D G3DSA:3.30.300.10 5 233 2.6E-178 T 14-10-2018 JV59_01050 4e6ad58d3156eefc9e680849a5b636cd 384 SUPERFAMILY SSF55973 233 382 3.22E-71 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JV59_01050 4e6ad58d3156eefc9e680849a5b636cd 384 SUPERFAMILY SSF55973 3 109 4.71E-47 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JV59_01050 4e6ad58d3156eefc9e680849a5b636cd 384 SUPERFAMILY SSF55973 111 232 4.71E-51 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JV59_01050 4e6ad58d3156eefc9e680849a5b636cd 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 9.3E-43 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JV59_01050 4e6ad58d3156eefc9e680849a5b636cd 384 Gene3D G3DSA:3.30.300.10 103 372 2.6E-178 T 14-10-2018 JV59_01050 4e6ad58d3156eefc9e680849a5b636cd 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 379 1.7E-196 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JV59_01050 4e6ad58d3156eefc9e680849a5b636cd 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 7.0E-44 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JV59_01050 4e6ad58d3156eefc9e680849a5b636cd 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 1.2E-69 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JV59_01050 4e6ad58d3156eefc9e680849a5b636cd 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JV59_26700 a289bc776b3751c83729ffabff707d5e 60 Pfam PF12065 Protein of unknown function (DUF3545) 1 58 1.4E-23 T 14-10-2018 IPR021932 Protein of unknown function DUF3545 JV59_06435 6677b15017b85e6113433b80b2789156 363 Pfam PF13439 Glycosyltransferase Family 4 18 176 1.7E-14 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 JV59_06435 6677b15017b85e6113433b80b2789156 363 Pfam PF00534 Glycosyl transferases group 1 189 338 6.8E-35 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 JV59_06435 6677b15017b85e6113433b80b2789156 363 Gene3D G3DSA:3.40.50.2000 66 356 8.0E-61 T 14-10-2018 JV59_06435 6677b15017b85e6113433b80b2789156 363 SUPERFAMILY SSF53756 9 357 5.1E-64 T 14-10-2018 JV59_06435 6677b15017b85e6113433b80b2789156 363 Gene3D G3DSA:3.40.50.2000 172 345 8.0E-61 T 14-10-2018 JV59_35705 bb0942191d330820b0a256e378e7a9d2 211 PIRSF PIRSF004525 1 211 3.7E-10 T 14-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted JV59_35705 bb0942191d330820b0a256e378e7a9d2 211 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 29 1.1E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_35705 bb0942191d330820b0a256e378e7a9d2 211 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_35705 bb0942191d330820b0a256e378e7a9d2 211 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 28 2.2E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_38355 75a1eda0f1b4da6f85f77bc2315f4100 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.8E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_38355 75a1eda0f1b4da6f85f77bc2315f4100 335 SUPERFAMILY SSF47413 1 59 2.72E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_38355 75a1eda0f1b4da6f85f77bc2315f4100 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 JV59_38355 75a1eda0f1b4da6f85f77bc2315f4100 335 Gene3D G3DSA:1.10.260.40 1 59 3.3E-26 T 14-10-2018 JV59_38355 75a1eda0f1b4da6f85f77bc2315f4100 335 Gene3D G3DSA:3.40.50.2300 61 306 6.7E-83 T 14-10-2018 JV59_38355 75a1eda0f1b4da6f85f77bc2315f4100 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 5.9E-42 T 14-10-2018 JV59_38355 75a1eda0f1b4da6f85f77bc2315f4100 335 Gene3D G3DSA:3.40.50.2300 160 289 6.7E-83 T 14-10-2018 JV59_38355 75a1eda0f1b4da6f85f77bc2315f4100 335 SMART SM00354 1 71 8.3E-33 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_38355 75a1eda0f1b4da6f85f77bc2315f4100 335 SUPERFAMILY SSF53822 60 332 1.25E-91 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_39030 afb4e49270ead07887f15ba5b4b2e941 277 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 8 274 2.5E-84 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 JV59_39030 afb4e49270ead07887f15ba5b4b2e941 277 SUPERFAMILY SSF51735 106 273 2.6E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_39030 afb4e49270ead07887f15ba5b4b2e941 277 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 30.892 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 JV59_39030 afb4e49270ead07887f15ba5b4b2e941 277 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 195 1.7E-13 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase JV59_39030 afb4e49270ead07887f15ba5b4b2e941 277 SUPERFAMILY SSF53223 6 105 1.61E-30 T 14-10-2018 JV59_39030 afb4e49270ead07887f15ba5b4b2e941 277 Gene3D G3DSA:3.40.50.10860 8 258 1.4E-82 T 14-10-2018 JV59_39030 afb4e49270ead07887f15ba5b4b2e941 277 Gene3D G3DSA:3.40.50.720 119 239 1.4E-82 T 14-10-2018 JV59_39030 afb4e49270ead07887f15ba5b4b2e941 277 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 6.2E-22 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 JV59_16205 3d9061f2e45564d727d90de3ad8c77a2 178 Pfam PF00924 Mechanosensitive ion channel 63 168 6.3E-14 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 JV59_16205 3d9061f2e45564d727d90de3ad8c77a2 178 Gene3D G3DSA:2.30.30.60 118 169 9.0E-10 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily JV59_16205 3d9061f2e45564d727d90de3ad8c77a2 178 SUPERFAMILY SSF50182 103 168 3.24E-13 T 14-10-2018 IPR010920 LSM domain superfamily JV59_16560 b4e09053b58bb30bbfd528c5caed0771 329 SMART SM00020 25 264 2.3E-34 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 JV59_16560 b4e09053b58bb30bbfd528c5caed0771 329 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 68 73 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 JV59_16560 b4e09053b58bb30bbfd528c5caed0771 329 SUPERFAMILY SSF50494 1 270 1.23E-52 T 14-10-2018 IPR009003 Peptidase S1, PA clan JV59_16560 b4e09053b58bb30bbfd528c5caed0771 329 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 212 223 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site JV59_16560 b4e09053b58bb30bbfd528c5caed0771 329 Gene3D G3DSA:2.40.10.10 18 269 6.0E-49 T 14-10-2018 JV59_16560 b4e09053b58bb30bbfd528c5caed0771 329 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 120 134 1.0E-12 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 JV59_16560 b4e09053b58bb30bbfd528c5caed0771 329 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 58 73 1.0E-12 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 JV59_16560 b4e09053b58bb30bbfd528c5caed0771 329 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 211 223 1.0E-12 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 JV59_16560 b4e09053b58bb30bbfd528c5caed0771 329 Pfam PF00089 Trypsin 26 264 2.7E-35 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 JV59_16560 b4e09053b58bb30bbfd528c5caed0771 329 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 304 324 0.0024 T 14-10-2018 IPR020008 GlyGly-CTERM domain JV59_36760 d813c17d254adf9e6e4a2c201f946055 710 SMART SM00322 553 618 1.1E-10 T 14-10-2018 IPR004087 K Homology domain GO:0003676 JV59_36760 d813c17d254adf9e6e4a2c201f946055 710 Gene3D G3DSA:3.30.230.70 234 550 2.5E-114 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JV59_36760 d813c17d254adf9e6e4a2c201f946055 710 Gene3D G3DSA:2.40.50.140 623 694 8.0E-30 T 14-10-2018 JV59_36760 d813c17d254adf9e6e4a2c201f946055 710 SUPERFAMILY SSF54211 5 145 2.02E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JV59_36760 d813c17d254adf9e6e4a2c201f946055 710 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JV59_36760 d813c17d254adf9e6e4a2c201f946055 710 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 3.2E-12 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JV59_36760 d813c17d254adf9e6e4a2c201f946055 710 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 243 321 1.1E-23 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JV59_36760 d813c17d254adf9e6e4a2c201f946055 710 SUPERFAMILY SSF54791 553 630 1.52E-15 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 JV59_36760 d813c17d254adf9e6e4a2c201f946055 710 SUPERFAMILY SSF46915 240 321 1.94E-19 T 14-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JV59_36760 d813c17d254adf9e6e4a2c201f946055 710 SUPERFAMILY SSF54211 299 493 3.85E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JV59_36760 d813c17d254adf9e6e4a2c201f946055 710 SUPERFAMILY SSF50249 608 694 8.4E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_36760 d813c17d254adf9e6e4a2c201f946055 710 Pfam PF00013 KH domain 557 615 3.9E-8 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 JV59_36760 d813c17d254adf9e6e4a2c201f946055 710 Pfam PF01138 3' exoribonuclease family, domain 1 17 145 8.7E-19 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JV59_36760 d813c17d254adf9e6e4a2c201f946055 710 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 4.8E-20 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JV59_36760 d813c17d254adf9e6e4a2c201f946055 710 Pfam PF00575 S1 RNA binding domain 620 691 6.2E-19 T 14-10-2018 IPR003029 S1 domain GO:0003676 JV59_36760 d813c17d254adf9e6e4a2c201f946055 710 PIRSF PIRSF005499 2 710 1.4E-297 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JV59_36760 d813c17d254adf9e6e4a2c201f946055 710 SUPERFAMILY SSF55666 451 550 1.54E-27 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JV59_36760 d813c17d254adf9e6e4a2c201f946055 710 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.157 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JV59_36760 d813c17d254adf9e6e4a2c201f946055 710 SMART SM00316 621 691 5.2E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 JV59_36760 d813c17d254adf9e6e4a2c201f946055 710 Gene3D G3DSA:3.30.230.70 2 229 7.7E-77 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JV59_36760 d813c17d254adf9e6e4a2c201f946055 710 Gene3D G3DSA:3.30.1370.10 551 622 1.8E-18 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 JV59_36760 d813c17d254adf9e6e4a2c201f946055 710 SUPERFAMILY SSF55666 146 236 8.41E-29 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JV59_26715 273183f16137cde3b2979f35b78e993d 56 Pfam PF07235 Protein of unknown function (DUF1427) 6 43 1.7E-5 T 14-10-2018 IPR009872 Protein of unknown function DUF1427 JV59_26715 273183f16137cde3b2979f35b78e993d 56 TIGRFAM TIGR03510 XapX: XapX domain 4 50 2.7E-19 T 14-10-2018 IPR020017 XapX domain JV59_37045 c3ef66d326f248c206b584e19177b915 454 Pfam PF07690 Major Facilitator Superfamily 34 401 4.0E-49 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_37045 c3ef66d326f248c206b584e19177b915 454 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 439 6.3E-236 T 14-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 JV59_37045 c3ef66d326f248c206b584e19177b915 454 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 14-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 JV59_37045 c3ef66d326f248c206b584e19177b915 454 Gene3D G3DSA:1.20.1250.20 18 227 5.8E-58 T 14-10-2018 JV59_37045 c3ef66d326f248c206b584e19177b915 454 Gene3D G3DSA:1.20.1250.20 241 452 2.2E-62 T 14-10-2018 JV59_37045 c3ef66d326f248c206b584e19177b915 454 PIRSF PIRSF002808 5 452 9.0E-170 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 JV59_37045 c3ef66d326f248c206b584e19177b915 454 SUPERFAMILY SSF103473 20 445 1.31E-86 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_37045 c3ef66d326f248c206b584e19177b915 454 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 418 9.1E-152 T 14-10-2018 JV59_30800 1cdec326f7b994c81379052a63eea9c6 463 SUPERFAMILY SSF53300 134 418 3.27E-18 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JV59_30800 1cdec326f7b994c81379052a63eea9c6 463 Pfam PF00092 von Willebrand factor type A domain 143 263 5.2E-8 T 14-10-2018 IPR002035 von Willebrand factor, type A JV59_30800 1cdec326f7b994c81379052a63eea9c6 463 Gene3D G3DSA:3.40.50.410 133 429 2.9E-18 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JV59_30800 1cdec326f7b994c81379052a63eea9c6 463 SMART SM00327 141 434 2.2E-5 T 14-10-2018 IPR002035 von Willebrand factor, type A JV59_22080 4389150529ed0af06981e449d1ec6212 146 Gene3D G3DSA:1.25.40.20 16 146 3.9E-35 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JV59_22080 4389150529ed0af06981e449d1ec6212 146 Pfam PF12796 Ankyrin repeats (3 copies) 27 119 8.9E-17 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain JV59_22080 4389150529ed0af06981e449d1ec6212 146 SUPERFAMILY SSF48403 26 142 3.73E-33 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JV59_22080 4389150529ed0af06981e449d1ec6212 146 SMART SM00248 22 51 1.4 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JV59_22080 4389150529ed0af06981e449d1ec6212 146 SMART SM00248 55 84 7.4E-4 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JV59_22080 4389150529ed0af06981e449d1ec6212 146 SMART SM00248 122 146 3100.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JV59_22080 4389150529ed0af06981e449d1ec6212 146 SMART SM00248 89 118 4.9E-4 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 JV59_26240 c8e6f841d3b1023abddb5e057148bc11 208 Gene3D G3DSA:3.40.50.1950 1 205 1.7E-78 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 JV59_26240 c8e6f841d3b1023abddb5e057148bc11 208 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 7 204 35.095 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like JV59_26240 c8e6f841d3b1023abddb5e057148bc11 208 SUPERFAMILY SSF52507 7 203 1.83E-58 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 JV59_26240 c8e6f841d3b1023abddb5e057148bc11 208 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 9 202 3.4E-58 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like JV59_26240 c8e6f841d3b1023abddb5e057148bc11 208 Pfam PF02441 Flavoprotein 8 183 8.6E-26 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 JV59_20555 a5a246b89a31ee78e53d7ad0edd0ce49 291 Pfam PF03466 LysR substrate binding domain 88 284 7.8E-15 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_20555 a5a246b89a31ee78e53d7ad0edd0ce49 291 SUPERFAMILY SSF53850 92 286 1.33E-17 T 14-10-2018 JV59_20555 a5a246b89a31ee78e53d7ad0edd0ce49 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 9.8E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_20555 a5a246b89a31ee78e53d7ad0edd0ce49 291 Gene3D G3DSA:3.40.190.290 92 290 9.6E-18 T 14-10-2018 JV59_20555 a5a246b89a31ee78e53d7ad0edd0ce49 291 Gene3D G3DSA:1.10.10.10 1 89 2.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_20555 a5a246b89a31ee78e53d7ad0edd0ce49 291 SUPERFAMILY SSF46785 1 84 3.75E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_20535 300a40abdf2b289401334763f413ab93 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 1.1E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_20535 300a40abdf2b289401334763f413ab93 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 1.1E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_20535 300a40abdf2b289401334763f413ab93 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 460 1.1E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_20535 300a40abdf2b289401334763f413ab93 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 461 8.0E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_20535 300a40abdf2b289401334763f413ab93 464 SMART SM00388 246 312 6.3E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_20535 300a40abdf2b289401334763f413ab93 464 SMART SM00387 351 463 1.4E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_20535 300a40abdf2b289401334763f413ab93 464 Gene3D G3DSA:3.30.565.10 311 463 1.5E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_20535 300a40abdf2b289401334763f413ab93 464 SUPERFAMILY SSF47384 236 308 3.34E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_20535 300a40abdf2b289401334763f413ab93 464 SUPERFAMILY SSF55874 307 461 1.44E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_20535 300a40abdf2b289401334763f413ab93 464 Gene3D G3DSA:1.10.287.130 231 310 1.3E-14 T 14-10-2018 JV59_20535 300a40abdf2b289401334763f413ab93 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 247 307 4.4E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_01210 364ad9fdf4d2020830f475b7bc35c5b0 431 Pfam PF00639 PPIC-type PPIASE domain 287 380 2.5E-23 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 JV59_01210 364ad9fdf4d2020830f475b7bc35c5b0 431 Gene3D G3DSA:3.10.50.40 174 273 1.1E-67 T 14-10-2018 JV59_01210 364ad9fdf4d2020830f475b7bc35c5b0 431 Gene3D G3DSA:3.10.50.40 278 418 2.3E-38 T 14-10-2018 JV59_01210 364ad9fdf4d2020830f475b7bc35c5b0 431 SUPERFAMILY SSF54534 175 273 3.34E-24 T 14-10-2018 JV59_01210 364ad9fdf4d2020830f475b7bc35c5b0 431 Pfam PF13616 PPIC-type PPIASE domain 164 272 2.3E-21 T 14-10-2018 JV59_01210 364ad9fdf4d2020830f475b7bc35c5b0 431 Gene3D G3DSA:1.10.4030.30 28 274 1.1E-67 T 14-10-2018 JV59_01210 364ad9fdf4d2020830f475b7bc35c5b0 431 SUPERFAMILY SSF109998 27 200 7.65E-35 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily JV59_01210 364ad9fdf4d2020830f475b7bc35c5b0 431 Pfam PF09312 SurA N-terminal domain 27 144 2.3E-41 T 14-10-2018 IPR015391 SurA N-terminal JV59_01210 364ad9fdf4d2020830f475b7bc35c5b0 431 Hamap MF_01183 Chaperone SurA [surA]. 7 426 31.437 T 14-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 JV59_01210 364ad9fdf4d2020830f475b7bc35c5b0 431 SUPERFAMILY SSF54534 281 383 4.78E-29 T 14-10-2018 JV59_31980 88b0addf95007bbf94c841810e074dba 248 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 124 136 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 JV59_31980 88b0addf95007bbf94c841810e074dba 248 Pfam PF00069 Protein kinase domain 52 207 3.2E-9 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JV59_31980 88b0addf95007bbf94c841810e074dba 248 SUPERFAMILY SSF56112 31 213 9.98E-22 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily JV59_31980 88b0addf95007bbf94c841810e074dba 248 SMART SM00220 20 244 8.4E-4 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JV59_31980 88b0addf95007bbf94c841810e074dba 248 Gene3D G3DSA:1.10.510.10 93 228 5.9E-16 T 14-10-2018 JV59_31980 88b0addf95007bbf94c841810e074dba 248 Gene3D G3DSA:3.30.200.20 30 92 5.9E-16 T 14-10-2018 JV59_30945 10d6b7874d5504b42d113db90409c06e 289 SMART SM00849 38 224 2.4E-16 T 14-10-2018 IPR001279 Metallo-beta-lactamase JV59_30945 10d6b7874d5504b42d113db90409c06e 289 Pfam PF00753 Metallo-beta-lactamase superfamily 38 224 1.6E-7 T 14-10-2018 IPR001279 Metallo-beta-lactamase JV59_30945 10d6b7874d5504b42d113db90409c06e 289 SUPERFAMILY SSF56281 25 264 2.9E-37 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JV59_30945 10d6b7874d5504b42d113db90409c06e 289 Gene3D G3DSA:3.60.15.10 22 243 8.1E-25 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JV59_18515 b0597237c421c6c2276602bf23ffdf8f 118 SUPERFAMILY SSF142906 1 115 1.57E-37 T 14-10-2018 IPR038056 YjbR-like superfamily JV59_18515 b0597237c421c6c2276602bf23ffdf8f 118 Gene3D G3DSA:3.90.1150.30 1 117 1.4E-40 T 14-10-2018 IPR038056 YjbR-like superfamily JV59_18515 b0597237c421c6c2276602bf23ffdf8f 118 Pfam PF04237 YjbR 14 102 1.2E-24 T 14-10-2018 IPR007351 Uncharacterised protein YjbR JV59_20935 b103eb5923640d9a64426dd0c5159097 461 SMART SM00345 7 66 1.8E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_20935 b103eb5923640d9a64426dd0c5159097 461 Gene3D G3DSA:3.90.1150.10 110 452 1.4E-68 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_20935 b103eb5923640d9a64426dd0c5159097 461 Gene3D G3DSA:1.10.10.10 1 67 8.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_20935 b103eb5923640d9a64426dd0c5159097 461 Pfam PF00155 Aminotransferase class I and II 117 438 1.3E-31 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JV59_20935 b103eb5923640d9a64426dd0c5159097 461 Gene3D G3DSA:3.40.640.10 134 352 1.4E-68 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_20935 b103eb5923640d9a64426dd0c5159097 461 SUPERFAMILY SSF46785 1 70 8.17E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_20935 b103eb5923640d9a64426dd0c5159097 461 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 1.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_20935 b103eb5923640d9a64426dd0c5159097 461 SUPERFAMILY SSF53383 102 455 4.98E-73 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_37155 ea41ce49d64bbea6d4ce70a328e11269 418 Pfam PF11871 Domain of unknown function (DUF3391) 4 138 3.4E-31 T 14-10-2018 IPR021812 Protein of unknown function DUF3391 JV59_37155 ea41ce49d64bbea6d4ce70a328e11269 418 SMART SM00471 165 301 3.0E-8 T 14-10-2018 IPR003607 HD/PDEase domain JV59_37155 ea41ce49d64bbea6d4ce70a328e11269 418 Gene3D G3DSA:1.10.3210.10 5 331 3.2E-54 T 14-10-2018 JV59_37155 ea41ce49d64bbea6d4ce70a328e11269 418 SUPERFAMILY SSF109604 160 331 4.12E-26 T 14-10-2018 JV59_37155 ea41ce49d64bbea6d4ce70a328e11269 418 Pfam PF01966 HD domain 171 291 7.4E-15 T 14-10-2018 IPR006674 HD domain JV59_37155 ea41ce49d64bbea6d4ce70a328e11269 418 TIGRFAM TIGR00277 HDIG: HDIG domain 167 260 7.6E-9 T 14-10-2018 IPR006675 HDIG domain JV59_28825 46b40e0119227786e51440e11cb70481 350 SMART SM00729 43 255 4.6E-41 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JV59_28825 46b40e0119227786e51440e11cb70481 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 2.9E-20 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 JV59_28825 46b40e0119227786e51440e11cb70481 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.74 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 JV59_28825 46b40e0119227786e51440e11cb70481 350 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 2.9E-124 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 JV59_28825 46b40e0119227786e51440e11cb70481 350 SMART SM00876 220 312 9.0E-45 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 JV59_28825 46b40e0119227786e51440e11cb70481 350 Gene3D G3DSA:3.20.20.70 4 315 2.7E-131 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_28825 46b40e0119227786e51440e11cb70481 350 SUPERFAMILY SSF102114 5 310 1.7E-89 T 14-10-2018 JV59_28825 46b40e0119227786e51440e11cb70481 350 PIRSF PIRSF001619 1 318 2.0E-137 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 JV59_28825 46b40e0119227786e51440e11cb70481 350 Pfam PF04055 Radical SAM superfamily 50 199 5.1E-16 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JV59_22120 4ea7b6fc5dd577c85fd11e0340c3afdc 121 Gene3D G3DSA:1.10.10.10 7 121 7.9E-40 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_22120 4ea7b6fc5dd577c85fd11e0340c3afdc 121 SUPERFAMILY SSF46785 15 118 1.05E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_22120 4ea7b6fc5dd577c85fd11e0340c3afdc 121 Pfam PF01638 HxlR-like helix-turn-helix 27 115 1.1E-33 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type JV59_28425 4facde3fab8a8494e02212b7fd503c62 349 SUPERFAMILY SSF46689 290 340 1.03E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_28425 4facde3fab8a8494e02212b7fd503c62 349 SMART SM00342 255 337 1.6E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_28425 4facde3fab8a8494e02212b7fd503c62 349 Pfam PF12833 Helix-turn-helix domain 261 338 1.1E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_28425 4facde3fab8a8494e02212b7fd503c62 349 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 306 321 4.9E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_28425 4facde3fab8a8494e02212b7fd503c62 349 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 321 337 4.9E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_28425 4facde3fab8a8494e02212b7fd503c62 349 Gene3D G3DSA:1.10.10.60 235 348 1.3E-26 T 14-10-2018 JV59_28425 4facde3fab8a8494e02212b7fd503c62 349 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 32 212 3.2E-34 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal JV59_18045 bd17206e0b40f6b11f3a88178375fa5d 297 Gene3D G3DSA:3.40.190.10 102 284 3.2E-36 T 14-10-2018 JV59_18045 bd17206e0b40f6b11f3a88178375fa5d 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.0E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_18045 bd17206e0b40f6b11f3a88178375fa5d 297 Gene3D G3DSA:1.10.10.10 6 96 8.0E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_18045 bd17206e0b40f6b11f3a88178375fa5d 297 Pfam PF03466 LysR substrate binding domain 91 286 6.7E-25 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_18045 bd17206e0b40f6b11f3a88178375fa5d 297 SUPERFAMILY SSF53850 88 284 1.28E-25 T 14-10-2018 JV59_18045 bd17206e0b40f6b11f3a88178375fa5d 297 SUPERFAMILY SSF46785 3 80 7.26E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_18045 bd17206e0b40f6b11f3a88178375fa5d 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_18045 bd17206e0b40f6b11f3a88178375fa5d 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_18045 bd17206e0b40f6b11f3a88178375fa5d 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_18045 bd17206e0b40f6b11f3a88178375fa5d 297 Gene3D G3DSA:3.40.190.10 162 260 3.2E-36 T 14-10-2018 JV59_24205 54dd641ca85e53025a9770f59140f5c4 82 Gene3D G3DSA:1.20.5.190 26 81 6.9E-14 T 14-10-2018 JV59_24205 54dd641ca85e53025a9770f59140f5c4 82 SUPERFAMILY SSF58042 27 81 3.27E-16 T 14-10-2018 JV59_24205 54dd641ca85e53025a9770f59140f5c4 82 Pfam PF04728 Lipoprotein leucine-zipper 30 82 4.0E-24 T 14-10-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 JV59_24205 54dd641ca85e53025a9770f59140f5c4 82 PIRSF PIRSF002855 1 82 2.2E-32 T 14-10-2018 IPR016367 Murein-lipoprotein JV59_30540 a564c73552ef9ed1f88bae26466f4749 435 SMART SM00388 212 277 1.7E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_30540 a564c73552ef9ed1f88bae26466f4749 435 SMART SM00304 159 211 9.3E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_30540 a564c73552ef9ed1f88bae26466f4749 435 SUPERFAMILY SSF158472 160 210 4.45E-6 T 14-10-2018 JV59_30540 a564c73552ef9ed1f88bae26466f4749 435 SMART SM00387 319 429 1.6E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_30540 a564c73552ef9ed1f88bae26466f4749 435 Gene3D G3DSA:1.10.287.130 163 278 1.3E-22 T 14-10-2018 JV59_30540 a564c73552ef9ed1f88bae26466f4749 435 SUPERFAMILY SSF55874 266 430 1.09E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_30540 a564c73552ef9ed1f88bae26466f4749 435 Gene3D G3DSA:3.30.565.10 289 433 2.4E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_30540 a564c73552ef9ed1f88bae26466f4749 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 1.8E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_30540 a564c73552ef9ed1f88bae26466f4749 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 1.8E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_30540 a564c73552ef9ed1f88bae26466f4749 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 1.8E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_30540 a564c73552ef9ed1f88bae26466f4749 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 1.8E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_30540 a564c73552ef9ed1f88bae26466f4749 435 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 426 1.5E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_30540 a564c73552ef9ed1f88bae26466f4749 435 Pfam PF00512 His Kinase A (phospho-acceptor) domain 213 275 3.4E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_30540 a564c73552ef9ed1f88bae26466f4749 435 SUPERFAMILY SSF47384 195 276 2.35E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_16880 f1b17022a25cb798cabf30f7ae3d1ecb 338 SUPERFAMILY SSF50129 6 146 3.14E-31 T 14-10-2018 IPR011032 GroES-like superfamily JV59_16880 f1b17022a25cb798cabf30f7ae3d1ecb 338 Gene3D G3DSA:3.40.50.720 129 307 7.0E-114 T 14-10-2018 JV59_16880 f1b17022a25cb798cabf30f7ae3d1ecb 338 Pfam PF16884 N-terminal domain of oxidoreductase 9 112 6.2E-35 T 14-10-2018 JV59_16880 f1b17022a25cb798cabf30f7ae3d1ecb 338 SMART SM00829 19 336 2.2E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JV59_16880 f1b17022a25cb798cabf30f7ae3d1ecb 338 Gene3D G3DSA:3.90.180.10 12 336 7.0E-114 T 14-10-2018 JV59_16880 f1b17022a25cb798cabf30f7ae3d1ecb 338 SUPERFAMILY SSF50129 300 337 6.59E-5 T 14-10-2018 IPR011032 GroES-like superfamily JV59_16880 f1b17022a25cb798cabf30f7ae3d1ecb 338 SUPERFAMILY SSF51735 128 259 1.97E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_16880 f1b17022a25cb798cabf30f7ae3d1ecb 338 Pfam PF00107 Zinc-binding dehydrogenase 161 256 1.3E-18 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JV59_34985 c4676659a06acff068517fdaeeedd3cc 295 PIRSF PIRSF003092 6 288 5.1E-85 T 14-10-2018 IPR025501 ATP binding protein MinD JV59_34985 c4676659a06acff068517fdaeeedd3cc 295 Gene3D G3DSA:3.40.50.300 22 263 1.8E-58 T 14-10-2018 JV59_34985 c4676659a06acff068517fdaeeedd3cc 295 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 22 261 2.5E-21 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 JV59_34985 c4676659a06acff068517fdaeeedd3cc 295 SUPERFAMILY SSF52540 22 284 9.06E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_34085 33e53f735619b74b909b332cd7864afb 404 Pfam PF02687 FtsX-like permease family 305 396 9.5E-14 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JV59_34085 33e53f735619b74b909b332cd7864afb 404 Pfam PF12704 MacB-like periplasmic core domain 19 236 3.0E-24 T 14-10-2018 IPR025857 MacB-like periplasmic core domain JV59_21260 ab032c10a4a83dd13f586bd44eaca7df 335 Gene3D G3DSA:3.30.360.10 144 328 4.0E-27 T 14-10-2018 JV59_21260 ab032c10a4a83dd13f586bd44eaca7df 335 SUPERFAMILY SSF51735 3 143 1.12E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_21260 ab032c10a4a83dd13f586bd44eaca7df 335 Gene3D G3DSA:3.40.50.720 1 143 4.9E-38 T 14-10-2018 JV59_21260 ab032c10a4a83dd13f586bd44eaca7df 335 SUPERFAMILY SSF55347 131 295 8.99E-15 T 14-10-2018 JV59_21260 ab032c10a4a83dd13f586bd44eaca7df 335 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 123 4.4E-25 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 JV59_19335 81a213f32eedac0b330627bc32747ecf 309 Gene3D G3DSA:2.40.100.10 180 307 4.6E-40 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily JV59_19335 81a213f32eedac0b330627bc32747ecf 309 SUPERFAMILY SSF50891 182 290 2.69E-8 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily JV59_19335 81a213f32eedac0b330627bc32747ecf 309 SMART SM00797 27 306 1.2E-118 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B JV59_19335 81a213f32eedac0b330627bc32747ecf 309 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 5 290 4.0E-79 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B JV59_19335 81a213f32eedac0b330627bc32747ecf 309 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 28 289 6.7E-82 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B JV59_20100 efd0bc7f139d88fee9ec3fff75ee4b50 306 Pfam PF11563 Protoglobin 14 161 3.3E-28 T 14-10-2018 JV59_20100 efd0bc7f139d88fee9ec3fff75ee4b50 306 Pfam PF01740 STAS domain 187 285 6.6E-10 T 14-10-2018 IPR002645 STAS domain JV59_20100 efd0bc7f139d88fee9ec3fff75ee4b50 306 Gene3D G3DSA:3.30.750.24 175 293 2.5E-36 T 14-10-2018 IPR036513 STAS domain superfamily JV59_20100 efd0bc7f139d88fee9ec3fff75ee4b50 306 SUPERFAMILY SSF52091 177 289 1.92E-18 T 14-10-2018 IPR036513 STAS domain superfamily JV59_20100 efd0bc7f139d88fee9ec3fff75ee4b50 306 SUPERFAMILY SSF46458 12 156 4.1E-32 T 14-10-2018 IPR009050 Globin-like superfamily JV59_20100 efd0bc7f139d88fee9ec3fff75ee4b50 306 Gene3D G3DSA:1.10.490.10 12 165 7.6E-34 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 JV59_17205 cefb31c2a8693bc2111f10f631486e5a 325 SUPERFAMILY SSF51735 106 289 1.81E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_17205 cefb31c2a8693bc2111f10f631486e5a 325 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 289 5.5E-53 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 JV59_17205 cefb31c2a8693bc2111f10f631486e5a 325 Gene3D G3DSA:3.40.50.720 2 307 7.8E-113 T 14-10-2018 JV59_17205 cefb31c2a8693bc2111f10f631486e5a 325 SUPERFAMILY SSF52283 2 123 6.17E-16 T 14-10-2018 JV59_17205 cefb31c2a8693bc2111f10f631486e5a 325 Gene3D G3DSA:3.40.50.720 102 292 7.8E-113 T 14-10-2018 JV59_17205 cefb31c2a8693bc2111f10f631486e5a 325 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 18 314 1.8E-9 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 JV59_39845 ea0c4fac26ff6ad4c43a0a13d0e8fe36 151 Pfam PF01590 GAF domain 19 141 9.1E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 JV59_39845 ea0c4fac26ff6ad4c43a0a13d0e8fe36 151 SUPERFAMILY SSF55781 13 129 1.9E-10 T 14-10-2018 JV59_39845 ea0c4fac26ff6ad4c43a0a13d0e8fe36 151 Gene3D G3DSA:3.30.450.40 5 144 2.7E-10 T 14-10-2018 IPR029016 GAF-like domain superfamily JV59_28060 02bc1e459a18b9ab01a3a95e6de01e3c 160 Gene3D G3DSA:3.90.79.10 1 142 1.6E-28 T 14-10-2018 JV59_28060 02bc1e459a18b9ab01a3a95e6de01e3c 160 SUPERFAMILY SSF55811 6 137 4.33E-24 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JV59_28060 02bc1e459a18b9ab01a3a95e6de01e3c 160 Pfam PF00293 NUDIX domain 5 125 1.9E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JV59_38180 e21da14841de6c9d3e80cfc8d4417aec 447 Gene3D G3DSA:3.30.1490.20 131 203 1.7E-156 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JV59_38180 e21da14841de6c9d3e80cfc8d4417aec 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 8.0E-84 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JV59_38180 e21da14841de6c9d3e80cfc8d4417aec 447 SUPERFAMILY SSF56059 83 346 4.04E-71 T 14-10-2018 JV59_38180 e21da14841de6c9d3e80cfc8d4417aec 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JV59_38180 e21da14841de6c9d3e80cfc8d4417aec 447 Gene3D G3DSA:3.30.470.20 86 433 1.7E-156 T 14-10-2018 JV59_38180 e21da14841de6c9d3e80cfc8d4417aec 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JV59_38180 e21da14841de6c9d3e80cfc8d4417aec 447 SMART SM00878 336 441 1.3E-63 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JV59_38180 e21da14841de6c9d3e80cfc8d4417aec 447 SUPERFAMILY SSF52440 1 113 1.73E-45 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JV59_38180 e21da14841de6c9d3e80cfc8d4417aec 447 Gene3D G3DSA:3.40.50.20 1 85 8.9E-34 T 14-10-2018 JV59_38180 e21da14841de6c9d3e80cfc8d4417aec 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 4.8E-43 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JV59_38180 e21da14841de6c9d3e80cfc8d4417aec 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 9.9E-243 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 JV59_38180 e21da14841de6c9d3e80cfc8d4417aec 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.5E-37 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JV59_38180 e21da14841de6c9d3e80cfc8d4417aec 447 SUPERFAMILY SSF51246 331 444 1.2E-42 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 JV59_22280 e840ba524031a9228c01fc71471526ee 879 Gene3D G3DSA:2.70.98.30 480 766 2.2E-75 T 14-10-2018 JV59_22280 e840ba524031a9228c01fc71471526ee 879 SUPERFAMILY SSF88713 5 271 3.04E-47 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 JV59_22280 e840ba524031a9228c01fc71471526ee 879 Gene3D G3DSA:1.20.1270.50 282 381 9.7E-27 T 14-10-2018 IPR037094 Glycoside hydrolase family 38, central domain superfamily GO:0004559|GO:0006013 JV59_22280 e840ba524031a9228c01fc71471526ee 879 SUPERFAMILY SSF74650 374 859 3.77E-67 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 JV59_22280 e840ba524031a9228c01fc71471526ee 879 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 387 852 3.5E-29 T 14-10-2018 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0004559|GO:0006013 JV59_22280 e840ba524031a9228c01fc71471526ee 879 SMART SM00872 278 356 4.0E-13 T 14-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 JV59_22280 e840ba524031a9228c01fc71471526ee 879 Gene3D G3DSA:3.20.110.10 1 275 1.6E-97 T 14-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily JV59_22280 e840ba524031a9228c01fc71471526ee 879 SUPERFAMILY SSF88688 284 374 5.62E-6 T 14-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily JV59_22280 e840ba524031a9228c01fc71471526ee 879 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 6 261 1.1E-34 T 14-10-2018 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0006013 JV59_22280 e840ba524031a9228c01fc71471526ee 879 Pfam PF09261 Alpha mannosidase middle domain 279 356 1.7E-6 T 14-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 JV59_29165 e5b702f08f90ee251ba8e0be8a0bb7d2 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 8 104 5.0E-44 T 14-10-2018 IPR007376 dsDNA mimic, putative JV59_29165 e5b702f08f90ee251ba8e0be8a0bb7d2 106 Gene3D G3DSA:3.10.450.140 5 105 4.8E-40 T 14-10-2018 IPR036763 Putative dsDNA mimic superfamily JV59_29165 e5b702f08f90ee251ba8e0be8a0bb7d2 106 SUPERFAMILY SSF102816 3 105 1.31E-46 T 14-10-2018 IPR036763 Putative dsDNA mimic superfamily JV59_29165 e5b702f08f90ee251ba8e0be8a0bb7d2 106 Pfam PF04269 Protein of unknown function, DUF440 5 105 2.2E-43 T 14-10-2018 IPR007376 dsDNA mimic, putative JV59_29165 e5b702f08f90ee251ba8e0be8a0bb7d2 106 PIRSF PIRSF004916 1 105 7.1E-50 T 14-10-2018 IPR007376 dsDNA mimic, putative JV59_29165 e5b702f08f90ee251ba8e0be8a0bb7d2 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 34.932 T 14-10-2018 IPR007376 dsDNA mimic, putative JV59_31835 0465e8f46fb32ffbfac0a31185bcfa0f 475 SUPERFAMILY SSF48317 217 359 1.83E-8 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily JV59_31835 0465e8f46fb32ffbfac0a31185bcfa0f 475 ProSitePatterns PS00893 Nudix box signature. 61 82 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JV59_31835 0465e8f46fb32ffbfac0a31185bcfa0f 475 SUPERFAMILY SSF55811 34 165 2.03E-16 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JV59_31835 0465e8f46fb32ffbfac0a31185bcfa0f 475 Gene3D G3DSA:3.90.79.10 34 180 6.7E-15 T 14-10-2018 JV59_31835 0465e8f46fb32ffbfac0a31185bcfa0f 475 Pfam PF00293 NUDIX domain 35 107 7.8E-11 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JV59_31835 0465e8f46fb32ffbfac0a31185bcfa0f 475 Pfam PF01569 PAP2 superfamily 245 358 6.9E-8 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JV59_40220 e62db163c15949ea3ff8e3b4588c6867 138 SUPERFAMILY SSF54928 46 133 4.57E-25 T 14-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 JV59_40220 e62db163c15949ea3ff8e3b4588c6867 138 Gene3D G3DSA:3.30.70.330 36 138 1.2E-25 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily JV59_40220 e62db163c15949ea3ff8e3b4588c6867 138 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 55 124 1.2E-16 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 JV59_40220 e62db163c15949ea3ff8e3b4588c6867 138 SMART SM00360 54 126 1.2E-19 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 JV59_33195 a14128064ace47f4ac46159167462c25 320 Gene3D G3DSA:1.10.10.10 1 90 5.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_33195 a14128064ace47f4ac46159167462c25 320 Pfam PF03466 LysR substrate binding domain 99 313 3.3E-13 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_33195 a14128064ace47f4ac46159167462c25 320 Gene3D G3DSA:3.40.190.10 180 281 1.5E-26 T 14-10-2018 JV59_33195 a14128064ace47f4ac46159167462c25 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 1.6E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_33195 a14128064ace47f4ac46159167462c25 320 SUPERFAMILY SSF46785 6 84 6.35E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_33195 a14128064ace47f4ac46159167462c25 320 Gene3D G3DSA:3.40.190.10 98 309 1.5E-26 T 14-10-2018 JV59_33195 a14128064ace47f4ac46159167462c25 320 SUPERFAMILY SSF53850 96 314 3.8E-24 T 14-10-2018 JV59_38885 88414e4fa41a12d291244a0d3e8c65d0 200 SUPERFAMILY SSF54523 13 123 1.33E-8 T 14-10-2018 JV59_38885 88414e4fa41a12d291244a0d3e8c65d0 200 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 11 189 5.4E-13 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 JV59_38885 88414e4fa41a12d291244a0d3e8c65d0 200 Gene3D G3DSA:3.55.40.10 39 200 2.3E-43 T 14-10-2018 JV59_38885 88414e4fa41a12d291244a0d3e8c65d0 200 PRINTS PR00885 Bacterial general secretion pathway protein H signature 149 164 3.4E-19 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 JV59_38885 88414e4fa41a12d291244a0d3e8c65d0 200 PRINTS PR00885 Bacterial general secretion pathway protein H signature 23 37 3.4E-19 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 JV59_38885 88414e4fa41a12d291244a0d3e8c65d0 200 PRINTS PR00885 Bacterial general secretion pathway protein H signature 8 22 3.4E-19 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 JV59_38885 88414e4fa41a12d291244a0d3e8c65d0 200 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_38885 88414e4fa41a12d291244a0d3e8c65d0 200 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 7.9E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_38885 88414e4fa41a12d291244a0d3e8c65d0 200 Pfam PF12019 Type II transport protein GspH 47 186 1.4E-5 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 JV59_19490 8a52094cb197be7e86cbd1ff9b74e432 260 SMART SM00062 32 259 0.0042 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_19490 8a52094cb197be7e86cbd1ff9b74e432 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 258 3.3E-17 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_19490 8a52094cb197be7e86cbd1ff9b74e432 260 Gene3D G3DSA:3.40.190.10 40 253 1.1E-18 T 14-10-2018 JV59_19490 8a52094cb197be7e86cbd1ff9b74e432 260 Gene3D G3DSA:3.40.190.10 115 217 1.1E-18 T 14-10-2018 JV59_19490 8a52094cb197be7e86cbd1ff9b74e432 260 SUPERFAMILY SSF53850 30 258 7.97E-30 T 14-10-2018 JV59_17705 d539dffbdd9ff60da64dbdab3e17a249 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 124 8.6E-17 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JV59_17705 d539dffbdd9ff60da64dbdab3e17a249 130 Gene3D G3DSA:3.10.180.10 7 126 1.3E-30 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_17705 d539dffbdd9ff60da64dbdab3e17a249 130 SUPERFAMILY SSF54593 1 126 8.86E-30 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_36615 7a66983b28fea8002608c61862ef2ad6 292 SUPERFAMILY SSF53067 2 109 5.0E-14 T 14-10-2018 JV59_36615 7a66983b28fea8002608c61862ef2ad6 292 Gene3D G3DSA:3.30.420.40 5 114 2.7E-56 T 14-10-2018 JV59_36615 7a66983b28fea8002608c61862ef2ad6 292 Gene3D G3DSA:3.30.420.40 115 259 2.7E-56 T 14-10-2018 JV59_36615 7a66983b28fea8002608c61862ef2ad6 292 SUPERFAMILY SSF53067 119 283 2.47E-34 T 14-10-2018 JV59_36615 7a66983b28fea8002608c61862ef2ad6 292 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 8 279 3.9E-17 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 JV59_17000 4aff83936d51e9837490c50eeb61fd87 233 Gene3D G3DSA:3.40.30.10 65 233 3.9E-31 T 14-10-2018 JV59_17000 4aff83936d51e9837490c50eeb61fd87 233 SUPERFAMILY SSF52833 68 230 1.43E-31 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_17000 4aff83936d51e9837490c50eeb61fd87 233 Pfam PF13462 Thioredoxin 74 231 1.9E-17 T 14-10-2018 IPR012336 Thioredoxin-like fold JV59_16755 c3e666954b2bc85880f783f0580660ee 352 SUPERFAMILY SSF55874 209 317 7.6E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_16755 c3e666954b2bc85880f783f0580660ee 352 Gene3D G3DSA:3.30.565.10 204 338 2.0E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_16755 c3e666954b2bc85880f783f0580660ee 352 SMART SM00387 243 341 8.4E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_16755 c3e666954b2bc85880f783f0580660ee 352 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 248 325 7.1E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_16755 c3e666954b2bc85880f783f0580660ee 352 SUPERFAMILY SSF103473 14 167 1.83E-5 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_16755 c3e666954b2bc85880f783f0580660ee 352 Pfam PF06580 Histidine kinase 151 229 3.9E-24 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 JV59_32905 8232b3a1131dddf2724caf64704ab94d 451 Pfam PF07730 Histidine kinase 250 315 9.6E-14 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 JV59_32905 8232b3a1131dddf2724caf64704ab94d 451 SMART SM01049 42 133 8.5E-33 T 14-10-2018 IPR033480 Single Cache domain 2 JV59_32905 8232b3a1131dddf2724caf64704ab94d 451 SUPERFAMILY SSF55874 322 443 1.57E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_32905 8232b3a1131dddf2724caf64704ab94d 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 446 2.4E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_32905 8232b3a1131dddf2724caf64704ab94d 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 7.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_32905 8232b3a1131dddf2724caf64704ab94d 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 444 7.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_32905 8232b3a1131dddf2724caf64704ab94d 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 7.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_32905 8232b3a1131dddf2724caf64704ab94d 451 PIRSF PIRSF037314 1 450 4.6E-183 T 14-10-2018 IPR017171 Signal transduction histidine kinase, MctS JV59_32905 8232b3a1131dddf2724caf64704ab94d 451 Pfam PF17200 Single Cache domain 2 45 190 3.4E-45 T 14-10-2018 IPR033480 Single Cache domain 2 JV59_32905 8232b3a1131dddf2724caf64704ab94d 451 Gene3D G3DSA:3.30.450.20 28 203 3.9E-50 T 14-10-2018 JV59_32905 8232b3a1131dddf2724caf64704ab94d 451 Gene3D G3DSA:3.30.565.10 313 447 1.7E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_32905 8232b3a1131dddf2724caf64704ab94d 451 SMART SM00387 353 447 3.2E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_17025 53e56bf517ba91eb929de73ec3f7e39f 172 Pfam PF02563 Polysaccharide biosynthesis/export protein 20 93 1.1E-18 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 JV59_17025 53e56bf517ba91eb929de73ec3f7e39f 172 Gene3D G3DSA:3.30.1950.10 26 97 1.7E-21 T 14-10-2018 JV59_17025 53e56bf517ba91eb929de73ec3f7e39f 172 Pfam PF10531 SLBB domain 100 142 1.1E-6 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_17025 53e56bf517ba91eb929de73ec3f7e39f 172 Gene3D G3DSA:3.10.560.10 20 148 1.7E-21 T 14-10-2018 JV59_35240 32231d5290c78febe1458b89a09bf082 353 Gene3D G3DSA:3.30.450.20 14 111 7.4E-8 T 14-10-2018 JV59_35240 32231d5290c78febe1458b89a09bf082 353 Pfam PF13188 PAS domain 21 71 4.2E-6 T 14-10-2018 IPR000014 PAS domain JV59_35240 32231d5290c78febe1458b89a09bf082 353 Gene3D G3DSA:3.30.565.10 193 348 1.5E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_35240 32231d5290c78febe1458b89a09bf082 353 SMART SM00388 125 191 2.8E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_35240 32231d5290c78febe1458b89a09bf082 353 Gene3D G3DSA:1.10.287.130 112 188 2.0E-9 T 14-10-2018 JV59_35240 32231d5290c78febe1458b89a09bf082 353 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 238 339 9.6E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_35240 32231d5290c78febe1458b89a09bf082 353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 271 285 4.4E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_35240 32231d5290c78febe1458b89a09bf082 353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 318 4.4E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_35240 32231d5290c78febe1458b89a09bf082 353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 289 299 4.4E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_35240 32231d5290c78febe1458b89a09bf082 353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 337 4.4E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_35240 32231d5290c78febe1458b89a09bf082 353 SUPERFAMILY SSF55874 180 340 3.93E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_35240 32231d5290c78febe1458b89a09bf082 353 SUPERFAMILY SSF47384 120 191 3.14E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_35240 32231d5290c78febe1458b89a09bf082 353 SMART SM00091 21 84 8.5E-6 T 14-10-2018 IPR000014 PAS domain JV59_35240 32231d5290c78febe1458b89a09bf082 353 SUPERFAMILY SSF55785 21 88 8.57E-10 T 14-10-2018 IPR035965 PAS domain superfamily JV59_35240 32231d5290c78febe1458b89a09bf082 353 SMART SM00387 234 340 7.7E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_35240 32231d5290c78febe1458b89a09bf082 353 Pfam PF00512 His Kinase A (phospho-acceptor) domain 125 189 2.1E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_40050 2a095bb4112be0a1e998a02626a81c33 113 Gene3D G3DSA:1.10.10.10 4 108 5.8E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_40050 2a095bb4112be0a1e998a02626a81c33 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 2.1E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_40050 2a095bb4112be0a1e998a02626a81c33 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 2.1E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_40050 2a095bb4112be0a1e998a02626a81c33 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 2.1E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_40050 2a095bb4112be0a1e998a02626a81c33 113 SMART SM00418 5 83 2.7E-24 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_40050 2a095bb4112be0a1e998a02626a81c33 113 SUPERFAMILY SSF46785 5 87 1.02E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_40050 2a095bb4112be0a1e998a02626a81c33 113 Pfam PF01022 Bacterial regulatory protein, arsR family 12 56 8.4E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_16035 0670906d85c56a63cbec6c736e885560 304 Gene3D G3DSA:1.20.1510.10 19 227 7.5E-34 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily JV59_16035 0670906d85c56a63cbec6c736e885560 304 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 19 299 8.3E-67 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 JV59_16035 0670906d85c56a63cbec6c736e885560 304 Pfam PF01545 Cation efflux family 23 227 1.1E-35 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 JV59_16035 0670906d85c56a63cbec6c736e885560 304 SUPERFAMILY SSF161111 15 228 2.88E-51 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily JV59_35080 a15b28864be64912c19cc7bcfa0ccf0c 264 SUPERFAMILY SSF55120 1 256 1.25E-93 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_35080 a15b28864be64912c19cc7bcfa0ccf0c 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 3.7E-75 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_35080 a15b28864be64912c19cc7bcfa0ccf0c 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 35.042 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_35080 a15b28864be64912c19cc7bcfa0ccf0c 264 Pfam PF01416 tRNA pseudouridine synthase 8 102 2.7E-11 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_35080 a15b28864be64912c19cc7bcfa0ccf0c 264 Pfam PF01416 tRNA pseudouridine synthase 144 244 5.3E-29 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_35080 a15b28864be64912c19cc7bcfa0ccf0c 264 Gene3D G3DSA:3.30.70.580 1 104 2.7E-40 T 14-10-2018 JV59_35080 a15b28864be64912c19cc7bcfa0ccf0c 264 Gene3D G3DSA:3.30.70.660 105 242 1.5E-48 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 JV59_35080 a15b28864be64912c19cc7bcfa0ccf0c 264 PIRSF PIRSF001430 1 252 4.2E-77 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_20815 ec0d34f66b1f778dfe49a094c7ba58b3 203 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 187 1.1E-32 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT JV59_25450 577157a40554004daa3bac0b2800875e 142 Gene3D G3DSA:1.10.10.10 3 85 2.1E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_25450 577157a40554004daa3bac0b2800875e 142 Pfam PF01475 Ferric uptake regulator family 12 131 5.2E-41 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 JV59_25450 577157a40554004daa3bac0b2800875e 142 Gene3D G3DSA:3.30.1490.190 87 142 1.5E-22 T 14-10-2018 JV59_25450 577157a40554004daa3bac0b2800875e 142 SUPERFAMILY SSF46785 7 135 9.99E-41 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_28935 4bb0b265117bb3633fefa408694b0e7e 357 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 164 4.6E-79 T 14-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 JV59_28935 4bb0b265117bb3633fefa408694b0e7e 357 SUPERFAMILY SSF54211 169 253 4.05E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JV59_28935 4bb0b265117bb3633fefa408694b0e7e 357 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 151 2.8E-28 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 JV59_28935 4bb0b265117bb3633fefa408694b0e7e 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 37.77 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 JV59_28935 4bb0b265117bb3633fefa408694b0e7e 357 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 2.1E-47 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 JV59_28935 4bb0b265117bb3633fefa408694b0e7e 357 SUPERFAMILY SSF54211 254 344 2.28E-31 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JV59_28935 4bb0b265117bb3633fefa408694b0e7e 357 Gene3D G3DSA:3.40.50.1000 1 165 2.1E-47 T 14-10-2018 IPR023214 HAD superfamily JV59_28935 4bb0b265117bb3633fefa408694b0e7e 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 JV59_28935 4bb0b265117bb3633fefa408694b0e7e 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 JV59_28935 4bb0b265117bb3633fefa408694b0e7e 357 Gene3D G3DSA:3.30.230.40 166 256 9.0E-36 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 JV59_28935 4bb0b265117bb3633fefa408694b0e7e 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 357 51.006 T 14-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 JV59_28935 4bb0b265117bb3633fefa408694b0e7e 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 3.3E-65 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 JV59_28935 4bb0b265117bb3633fefa408694b0e7e 357 Gene3D G3DSA:3.30.230.40 257 357 3.8E-37 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 JV59_28935 4bb0b265117bb3633fefa408694b0e7e 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 133 7.8E-6 T 14-10-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 JV59_28935 4bb0b265117bb3633fefa408694b0e7e 357 SUPERFAMILY SSF56784 3 158 1.58E-39 T 14-10-2018 IPR036412 HAD-like superfamily JV59_15980 2abe8aa2477717805b3d205e284406bd 504 Gene3D G3DSA:3.40.605.10 30 503 2.0E-201 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JV59_15980 2abe8aa2477717805b3d205e284406bd 504 SUPERFAMILY SSF53720 5 500 1.44E-93 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JV59_15980 2abe8aa2477717805b3d205e284406bd 504 Pfam PF00171 Aldehyde dehydrogenase family 4 450 7.1E-46 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JV59_15980 2abe8aa2477717805b3d205e284406bd 504 Gene3D G3DSA:3.40.309.10 254 438 2.0E-201 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JV59_37365 c0ccbc8f1fe54e720f586d777e2a6155 129 Gene3D G3DSA:3.30.1330.40 1 129 3.3E-48 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_37365 c0ccbc8f1fe54e720f586d777e2a6155 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 1.1E-53 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 JV59_37365 c0ccbc8f1fe54e720f586d777e2a6155 129 SUPERFAMILY SSF55298 2 128 1.73E-44 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_37365 c0ccbc8f1fe54e720f586d777e2a6155 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 6.0E-45 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 JV59_37365 c0ccbc8f1fe54e720f586d777e2a6155 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 14-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 JV59_30365 9b6be466281a3a79ba2c248c6cff4b89 221 Gene3D G3DSA:3.40.50.2300 2 136 9.1E-36 T 14-10-2018 JV59_30365 9b6be466281a3a79ba2c248c6cff4b89 221 SUPERFAMILY SSF52172 2 126 1.42E-37 T 14-10-2018 IPR011006 CheY-like superfamily JV59_30365 9b6be466281a3a79ba2c248c6cff4b89 221 Gene3D G3DSA:1.10.10.10 137 221 1.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_30365 9b6be466281a3a79ba2c248c6cff4b89 221 SUPERFAMILY SSF46894 142 216 4.54E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_30365 9b6be466281a3a79ba2c248c6cff4b89 221 Pfam PF00072 Response regulator receiver domain 4 113 1.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_30365 9b6be466281a3a79ba2c248c6cff4b89 221 SMART SM00862 141 215 4.7E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_30365 9b6be466281a3a79ba2c248c6cff4b89 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 142 215 3.0E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_30365 9b6be466281a3a79ba2c248c6cff4b89 221 SMART SM00448 2 112 3.1E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_18855 77685992873f94d6549262108dee77d1 435 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 92 389 3.9E-57 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme JV59_18855 77685992873f94d6549262108dee77d1 435 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 5 433 2.5E-215 T 14-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 JV59_18855 77685992873f94d6549262108dee77d1 435 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 435 252.938 T 14-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 JV59_18855 77685992873f94d6549262108dee77d1 435 Gene3D G3DSA:3.40.50.1100 111 233 1.6E-192 T 14-10-2018 JV59_18855 77685992873f94d6549262108dee77d1 435 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 103 117 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 JV59_18855 77685992873f94d6549262108dee77d1 435 Gene3D G3DSA:3.40.50.1100 18 433 1.6E-192 T 14-10-2018 JV59_18855 77685992873f94d6549262108dee77d1 435 SUPERFAMILY SSF53686 67 432 8.92E-53 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JV59_34720 cb6a7598cb0a7957a1b9903b5b5f7513 90 SUPERFAMILY SSF47729 1 90 3.97E-32 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 JV59_34720 cb6a7598cb0a7957a1b9903b5b5f7513 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.1E-33 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JV59_34720 cb6a7598cb0a7957a1b9903b5b5f7513 90 SMART SM00411 1 90 4.7E-44 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JV59_34720 cb6a7598cb0a7957a1b9903b5b5f7513 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 JV59_34720 cb6a7598cb0a7957a1b9903b5b5f7513 90 Gene3D G3DSA:4.10.520.10 1 90 1.8E-36 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 JV59_34720 cb6a7598cb0a7957a1b9903b5b5f7513 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.4E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JV59_34720 cb6a7598cb0a7957a1b9903b5b5f7513 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.4E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JV59_34720 cb6a7598cb0a7957a1b9903b5b5f7513 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.4E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JV59_19630 1892a3722a73bdc131d3a9d85d59f074 243 SUPERFAMILY SSF46689 8 86 1.59E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_19630 1892a3722a73bdc131d3a9d85d59f074 243 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 63 1.4E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_19630 1892a3722a73bdc131d3a9d85d59f074 243 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 1.8E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_19630 1892a3722a73bdc131d3a9d85d59f074 243 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 1.8E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_19630 1892a3722a73bdc131d3a9d85d59f074 243 Gene3D G3DSA:1.10.357.10 1 199 2.1E-20 T 14-10-2018 JV59_18325 6789ce74a5f4498e30da3b0893fbbfd2 535 SUPERFAMILY SSF141868 270 521 3.66E-75 T 14-10-2018 IPR035919 EAL domain superfamily JV59_18325 6789ce74a5f4498e30da3b0893fbbfd2 535 Pfam PF12792 CSS motif domain associated with EAL 41 135 9.7E-9 T 14-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain JV59_18325 6789ce74a5f4498e30da3b0893fbbfd2 535 Pfam PF00563 EAL domain 270 504 3.0E-62 T 14-10-2018 IPR001633 EAL domain JV59_18325 6789ce74a5f4498e30da3b0893fbbfd2 535 SMART SM00052 262 509 1.0E-87 T 14-10-2018 IPR001633 EAL domain JV59_18325 6789ce74a5f4498e30da3b0893fbbfd2 535 Gene3D G3DSA:3.20.20.450 261 522 2.3E-77 T 14-10-2018 IPR035919 EAL domain superfamily JV59_18130 02997c448dfca8d99117398543189001 401 Pfam PF07690 Major Facilitator Superfamily 15 354 2.7E-42 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_18130 02997c448dfca8d99117398543189001 401 Gene3D G3DSA:1.20.1720.10 10 386 4.0E-96 T 14-10-2018 JV59_18130 02997c448dfca8d99117398543189001 401 SUPERFAMILY SSF103473 7 386 1.7E-56 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_28385 d8e03d119b933dd4326b83f2b7b36e33 335 SUPERFAMILY SSF53822 60 331 4.12E-95 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_28385 d8e03d119b933dd4326b83f2b7b36e33 335 SMART SM00354 1 71 1.5E-37 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_28385 d8e03d119b933dd4326b83f2b7b36e33 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_28385 d8e03d119b933dd4326b83f2b7b36e33 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_28385 d8e03d119b933dd4326b83f2b7b36e33 335 Gene3D G3DSA:1.10.260.40 3 59 2.1E-24 T 14-10-2018 JV59_28385 d8e03d119b933dd4326b83f2b7b36e33 335 SUPERFAMILY SSF47413 1 59 1.53E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_28385 d8e03d119b933dd4326b83f2b7b36e33 335 Gene3D G3DSA:3.40.50.2300 161 323 1.2E-92 T 14-10-2018 JV59_28385 d8e03d119b933dd4326b83f2b7b36e33 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 JV59_28385 d8e03d119b933dd4326b83f2b7b36e33 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.4E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_28385 d8e03d119b933dd4326b83f2b7b36e33 335 Gene3D G3DSA:3.40.50.2300 69 322 1.2E-92 T 14-10-2018 JV59_28385 d8e03d119b933dd4326b83f2b7b36e33 335 Pfam PF13377 Periplasmic binding protein-like domain 170 330 4.3E-44 T 14-10-2018 JV59_28385 d8e03d119b933dd4326b83f2b7b36e33 335 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 63.554 T 14-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 JV59_40140 66be5161046633dacbdd03c0d10e7498 276 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 3 271 2.4E-119 T 14-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 JV59_40140 66be5161046633dacbdd03c0d10e7498 276 Pfam PF01694 Rhomboid family 134 273 1.9E-31 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 JV59_40140 66be5161046633dacbdd03c0d10e7498 276 Gene3D G3DSA:3.30.70.2350 1 70 7.8E-25 T 14-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily JV59_40140 66be5161046633dacbdd03c0d10e7498 276 SUPERFAMILY SSF144091 96 270 1.44E-40 T 14-10-2018 JV59_40140 66be5161046633dacbdd03c0d10e7498 276 Gene3D G3DSA:1.20.1540.10 90 276 5.8E-52 T 14-10-2018 IPR035952 Rhomboid-like superfamily JV59_40140 66be5161046633dacbdd03c0d10e7498 276 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 87 3.0E-33 T 14-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 JV59_27310 e35bf184d1824dbcc88b643612ef50fe 183 Gene3D G3DSA:1.10.260.40 6 72 2.9E-13 T 14-10-2018 JV59_27310 e35bf184d1824dbcc88b643612ef50fe 183 SMART SM00530 10 65 0.0074 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_27310 e35bf184d1824dbcc88b643612ef50fe 183 SUPERFAMILY SSF47413 4 70 1.91E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_27310 e35bf184d1824dbcc88b643612ef50fe 183 Pfam PF12844 Helix-turn-helix domain 8 70 9.5E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_19255 d071f1f0c7e9b4697706d872371b4fab 189 SUPERFAMILY SSF101874 23 188 5.89E-50 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily JV59_19255 d071f1f0c7e9b4697706d872371b4fab 189 Gene3D G3DSA:2.40.128.110 23 189 2.3E-49 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily JV59_19255 d071f1f0c7e9b4697706d872371b4fab 189 SMART SM00867 24 187 4.2E-64 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like JV59_19255 d071f1f0c7e9b4697706d872371b4fab 189 Hamap MF_00780 Protein YceI [yceI]. 1 189 44.34 T 14-10-2018 IPR023480 Uncharacterised protein family UPF0312/YceI JV59_19255 d071f1f0c7e9b4697706d872371b4fab 189 Pfam PF04264 YceI-like domain 25 184 6.8E-36 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like JV59_19285 e5fff50f6cf59f132cd3b08a0f162ad2 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_19285 e5fff50f6cf59f132cd3b08a0f162ad2 210 Pfam PF00072 Response regulator receiver domain 6 117 4.8E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_19285 e5fff50f6cf59f132cd3b08a0f162ad2 210 SMART SM00421 145 202 1.4E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_19285 e5fff50f6cf59f132cd3b08a0f162ad2 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 3.7E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_19285 e5fff50f6cf59f132cd3b08a0f162ad2 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 3.7E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_19285 e5fff50f6cf59f132cd3b08a0f162ad2 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 3.7E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_19285 e5fff50f6cf59f132cd3b08a0f162ad2 210 SMART SM00448 4 117 2.5E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_19285 e5fff50f6cf59f132cd3b08a0f162ad2 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 201 1.6E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_19285 e5fff50f6cf59f132cd3b08a0f162ad2 210 SUPERFAMILY SSF46894 131 204 1.7E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_19285 e5fff50f6cf59f132cd3b08a0f162ad2 210 Gene3D G3DSA:3.40.50.12740 4 206 3.8E-64 T 14-10-2018 JV59_19285 e5fff50f6cf59f132cd3b08a0f162ad2 210 SUPERFAMILY SSF52172 4 134 5.12E-34 T 14-10-2018 IPR011006 CheY-like superfamily JV59_39695 948488a042d900e0dd67e3addaefdc8d 368 Gene3D G3DSA:2.40.30.170 58 279 2.1E-73 T 14-10-2018 JV59_39695 948488a042d900e0dd67e3addaefdc8d 368 SUPERFAMILY SSF111369 58 273 5.62E-42 T 14-10-2018 JV59_39695 948488a042d900e0dd67e3addaefdc8d 368 Gene3D G3DSA:1.10.287.470 103 162 2.1E-73 T 14-10-2018 JV59_39695 948488a042d900e0dd67e3addaefdc8d 368 Gene3D G3DSA:2.40.420.20 280 351 2.1E-73 T 14-10-2018 JV59_39695 948488a042d900e0dd67e3addaefdc8d 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 353 5.2E-74 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 JV59_39695 948488a042d900e0dd67e3addaefdc8d 368 Gene3D G3DSA:2.40.50.100 68 196 2.1E-73 T 14-10-2018 JV59_39695 948488a042d900e0dd67e3addaefdc8d 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 269 4.8E-29 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JV59_01930 65cc8049999a9ceb9820940cb4425a51 756 Gene3D G3DSA:1.10.268.10 371 456 3.8E-179 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JV59_01930 65cc8049999a9ceb9820940cb4425a51 756 SUPERFAMILY SSF56719 33 485 1.44E-154 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JV59_01930 65cc8049999a9ceb9820940cb4425a51 756 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 637 0.064 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JV59_01930 65cc8049999a9ceb9820940cb4425a51 756 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 693 2.1E-9 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JV59_01930 65cc8049999a9ceb9820940cb4425a51 756 Gene3D G3DSA:2.120.10.90 502 743 8.6E-16 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal JV59_01930 65cc8049999a9ceb9820940cb4425a51 756 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 14-10-2018 JV59_01930 65cc8049999a9ceb9820940cb4425a51 756 SMART SM00434 13 463 4.6E-232 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JV59_01930 65cc8049999a9ceb9820940cb4425a51 756 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 470 1.5E-134 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JV59_01930 65cc8049999a9ceb9820940cb4425a51 756 Gene3D G3DSA:3.90.199.10 34 483 3.8E-179 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 JV59_01930 65cc8049999a9ceb9820940cb4425a51 756 SUPERFAMILY SSF101904 499 743 3.53E-53 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal JV59_01930 65cc8049999a9ceb9820940cb4425a51 756 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.826 T 14-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JV59_01930 65cc8049999a9ceb9820940cb4425a51 756 Gene3D G3DSA:3.30.1360.40 240 333 3.8E-179 T 14-10-2018 JV59_29530 7eb0f632678435c13889fa8f2bbab7ae 305 Gene3D G3DSA:1.10.10.10 6 94 3.3E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_29530 7eb0f632678435c13889fa8f2bbab7ae 305 Gene3D G3DSA:3.40.190.10 103 292 4.5E-41 T 14-10-2018 JV59_29530 7eb0f632678435c13889fa8f2bbab7ae 305 Pfam PF03466 LysR substrate binding domain 91 295 4.2E-28 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_29530 7eb0f632678435c13889fa8f2bbab7ae 305 Gene3D G3DSA:3.40.190.10 165 265 4.5E-41 T 14-10-2018 JV59_29530 7eb0f632678435c13889fa8f2bbab7ae 305 SUPERFAMILY SSF46785 4 84 1.02E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_29530 7eb0f632678435c13889fa8f2bbab7ae 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_29530 7eb0f632678435c13889fa8f2bbab7ae 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_29530 7eb0f632678435c13889fa8f2bbab7ae 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_29530 7eb0f632678435c13889fa8f2bbab7ae 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 4.6E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_29530 7eb0f632678435c13889fa8f2bbab7ae 305 SUPERFAMILY SSF53850 91 296 3.44E-31 T 14-10-2018 JV59_35770 8f5f2a3059f0f481960c130b45e708df 243 Pfam PF01863 Protein of unknown function DUF45 31 236 3.1E-63 T 14-10-2018 IPR002725 Protein of unknown function DUF45 JV59_35770 8f5f2a3059f0f481960c130b45e708df 243 Gene3D G3DSA:3.30.2010.10 145 236 1.5E-20 T 14-10-2018 JV59_02360 aa6a06afc406ea5a42cc5191bc3838b8 490 PIRSF PIRSF016599 5 489 3.0E-214 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JV59_02360 aa6a06afc406ea5a42cc5191bc3838b8 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 1.3E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JV59_02360 aa6a06afc406ea5a42cc5191bc3838b8 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 1.3E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JV59_02360 aa6a06afc406ea5a42cc5191bc3838b8 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 1.3E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JV59_02360 aa6a06afc406ea5a42cc5191bc3838b8 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 1.3E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JV59_02360 aa6a06afc406ea5a42cc5191bc3838b8 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 1.3E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JV59_02360 aa6a06afc406ea5a42cc5191bc3838b8 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 1.3E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JV59_02360 aa6a06afc406ea5a42cc5191bc3838b8 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 1.3E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JV59_02360 aa6a06afc406ea5a42cc5191bc3838b8 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 1.3E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JV59_02360 aa6a06afc406ea5a42cc5191bc3838b8 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 1.3E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JV59_02360 aa6a06afc406ea5a42cc5191bc3838b8 490 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 13 486 2.4E-180 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 JV59_02360 aa6a06afc406ea5a42cc5191bc3838b8 490 Pfam PF01546 Peptidase family M20/M25/M40 77 473 1.6E-20 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 JV59_02360 aa6a06afc406ea5a42cc5191bc3838b8 490 Gene3D G3DSA:3.40.630.10 372 490 1.0E-23 T 14-10-2018 JV59_02360 aa6a06afc406ea5a42cc5191bc3838b8 490 Gene3D G3DSA:3.40.630.10 1 236 2.1E-64 T 14-10-2018 JV59_02360 aa6a06afc406ea5a42cc5191bc3838b8 490 Pfam PF07687 Peptidase dimerisation domain 212 296 4.4E-7 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain JV59_02360 aa6a06afc406ea5a42cc5191bc3838b8 490 SUPERFAMILY SSF53187 15 486 1.39E-61 T 14-10-2018 JV59_29170 27e1a9ec907881416a4877a14481cccd 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 62 2.5E-15 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like JV59_29170 27e1a9ec907881416a4877a14481cccd 188 SUPERFAMILY SSF50104 1 65 1.38E-10 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily JV59_29170 27e1a9ec907881416a4877a14481cccd 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site JV59_29170 27e1a9ec907881416a4877a14481cccd 188 Gene3D G3DSA:2.30.30.30 1 65 2.2E-13 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 JV59_29170 27e1a9ec907881416a4877a14481cccd 188 SUPERFAMILY SSF50249 69 129 8.91E-12 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_29170 27e1a9ec907881416a4877a14481cccd 188 PIRSF PIRSF005901 1 188 1.0E-60 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP JV59_29170 27e1a9ec907881416a4877a14481cccd 188 SMART SM00841 132 187 2.6E-26 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 JV59_29170 27e1a9ec907881416a4877a14481cccd 188 Gene3D G3DSA:2.40.50.140 67 130 5.5E-16 T 14-10-2018 JV59_29170 27e1a9ec907881416a4877a14481cccd 188 SMART SM01185 69 124 4.1E-15 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 JV59_29170 27e1a9ec907881416a4877a14481cccd 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 42.755 T 14-10-2018 IPR011897 Translation elongation factor P-like, YeiP JV59_29170 27e1a9ec907881416a4877a14481cccd 188 Gene3D G3DSA:2.40.50.140 131 188 8.2E-21 T 14-10-2018 JV59_29170 27e1a9ec907881416a4877a14481cccd 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 2.4E-20 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 JV59_29170 27e1a9ec907881416a4877a14481cccd 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 124 2.0E-14 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 JV59_29170 27e1a9ec907881416a4877a14481cccd 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 4.4E-94 T 14-10-2018 IPR011897 Translation elongation factor P-like, YeiP JV59_29170 27e1a9ec907881416a4877a14481cccd 188 SUPERFAMILY SSF50249 132 188 4.11E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_27995 1758fb4e305be5486eedfcb8d5360e8c 212 Pfam PF01227 GTP cyclohydrolase I 40 211 9.3E-60 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 JV59_27995 1758fb4e305be5486eedfcb8d5360e8c 212 Gene3D G3DSA:3.30.1130.10 83 212 7.7E-50 T 14-10-2018 JV59_27995 1758fb4e305be5486eedfcb8d5360e8c 212 SUPERFAMILY SSF55620 7 211 8.15E-68 T 14-10-2018 JV59_27995 1758fb4e305be5486eedfcb8d5360e8c 212 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 37 211 5.3E-74 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 JV59_27995 1758fb4e305be5486eedfcb8d5360e8c 212 Gene3D G3DSA:1.10.286.10 1 82 6.9E-32 T 14-10-2018 JV59_27995 1758fb4e305be5486eedfcb8d5360e8c 212 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 32 212 29.956 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 JV59_27995 1758fb4e305be5486eedfcb8d5360e8c 212 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 142 152 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 JV59_27000 80343056669658a29151f9655a4b2e13 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 1.4E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_27000 80343056669658a29151f9655a4b2e13 225 Gene3D G3DSA:1.10.3720.10 12 225 3.3E-50 T 14-10-2018 IPR035906 MetI-like superfamily JV59_27000 80343056669658a29151f9655a4b2e13 225 SUPERFAMILY SSF161098 15 210 1.57E-46 T 14-10-2018 IPR035906 MetI-like superfamily JV59_19400 cd499232bced0e65cb5faab0aaab26ea 726 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 711 1.1E-241 T 14-10-2018 IPR010020 Integral membrane protein, YccS/YhfK JV59_19400 cd499232bced0e65cb5faab0aaab26ea 726 Pfam PF13515 Fusaric acid resistance protein-like 405 524 2.9E-21 T 14-10-2018 JV59_19400 cd499232bced0e65cb5faab0aaab26ea 726 Pfam PF12805 FUSC-like inner membrane protein yccS 68 348 2.2E-113 T 14-10-2018 IPR032692 Integral membrane protein YccS, N-terminal JV59_19400 cd499232bced0e65cb5faab0aaab26ea 726 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 712 0.0 T 14-10-2018 IPR010019 Integral membrane protein, YccS JV59_22290 35239d5d517e2af585c5eab86d10a1a1 239 SUPERFAMILY SSF64288 59 236 1.48E-46 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JV59_22290 35239d5d517e2af585c5eab86d10a1a1 239 SMART SM00866 90 229 4.4E-34 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 JV59_22290 35239d5d517e2af585c5eab86d10a1a1 239 SUPERFAMILY SSF46785 3 73 2.61E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_22290 35239d5d517e2af585c5eab86d10a1a1 239 Pfam PF07702 UTRA domain 94 229 1.2E-35 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 JV59_22290 35239d5d517e2af585c5eab86d10a1a1 239 SMART SM00345 10 69 5.3E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_22290 35239d5d517e2af585c5eab86d10a1a1 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 8.4E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_22290 35239d5d517e2af585c5eab86d10a1a1 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 8.4E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_22290 35239d5d517e2af585c5eab86d10a1a1 239 Gene3D G3DSA:1.10.10.10 4 74 4.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_22290 35239d5d517e2af585c5eab86d10a1a1 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 69 9.8E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_22290 35239d5d517e2af585c5eab86d10a1a1 239 Gene3D G3DSA:3.40.1410.10 75 233 1.5E-39 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JV59_20640 69f92a9560445f4345c2ea3f0ae2e3a9 552 Pfam PF12793 Sugar transport-related sRNA regulator N-term 12 112 1.6E-15 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain JV59_20640 69f92a9560445f4345c2ea3f0ae2e3a9 552 Gene3D G3DSA:3.40.190.10 127 316 4.8E-29 T 14-10-2018 JV59_20640 69f92a9560445f4345c2ea3f0ae2e3a9 552 SUPERFAMILY SSF53850 123 549 1.65E-41 T 14-10-2018 JV59_20640 69f92a9560445f4345c2ea3f0ae2e3a9 552 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 177 311 5.0E-18 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain JV59_37380 e0372d378b78b7738b5bb1fd721af3d3 156 SUPERFAMILY SSF55252 82 151 3.92E-19 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 JV59_37380 e0372d378b78b7738b5bb1fd721af3d3 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 58.814 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 JV59_37380 e0372d378b78b7738b5bb1fd721af3d3 156 Gene3D G3DSA:1.10.10.10 1 74 3.9E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_37380 e0372d378b78b7738b5bb1fd721af3d3 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 1.5E-22 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 JV59_37380 e0372d378b78b7738b5bb1fd721af3d3 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 1.5E-22 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 JV59_37380 e0372d378b78b7738b5bb1fd721af3d3 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 1.5E-22 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 JV59_37380 e0372d378b78b7738b5bb1fd721af3d3 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 1.5E-22 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 JV59_37380 e0372d378b78b7738b5bb1fd721af3d3 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 151 3.0E-43 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 JV59_37380 e0372d378b78b7738b5bb1fd721af3d3 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 147 3.8E-21 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 JV59_37380 e0372d378b78b7738b5bb1fd721af3d3 156 SUPERFAMILY SSF46785 3 77 2.9E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_37380 e0372d378b78b7738b5bb1fd721af3d3 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 8.0E-23 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 JV59_37380 e0372d378b78b7738b5bb1fd721af3d3 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 146 7.0E-22 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 JV59_37380 e0372d378b78b7738b5bb1fd721af3d3 156 Gene3D G3DSA:3.30.1360.40 75 156 3.2E-33 T 14-10-2018 JV59_23630 01a7e5e630d7c87626ca64dd8823db4f 118 Pfam PF04219 Protein of unknown function, DUF 12 100 8.5E-35 T 14-10-2018 IPR007335 Protein of unknown function DUF413 JV59_37925 d50a1189d4c80c52c3e6354d161ab59d 821 Pfam PF00773 RNB domain 267 594 4.8E-108 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 JV59_37925 d50a1189d4c80c52c3e6354d161ab59d 821 Pfam PF08206 Ribonuclease B OB domain 91 151 6.8E-21 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain JV59_37925 d50a1189d4c80c52c3e6354d161ab59d 821 Hamap MF_01895 Ribonuclease R [rnr]. 42 733 59.167 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 JV59_37925 d50a1189d4c80c52c3e6354d161ab59d 821 Pfam PF00575 S1 RNA binding domain 650 731 2.5E-13 T 14-10-2018 IPR003029 S1 domain GO:0003676 JV59_37925 d50a1189d4c80c52c3e6354d161ab59d 821 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 734 2.1E-275 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 JV59_37925 d50a1189d4c80c52c3e6354d161ab59d 821 SMART SM00955 267 595 2.0E-182 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 JV59_37925 d50a1189d4c80c52c3e6354d161ab59d 821 SUPERFAMILY SSF50249 145 244 2.14E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_37925 d50a1189d4c80c52c3e6354d161ab59d 821 Gene3D G3DSA:2.40.50.140 77 155 4.2E-12 T 14-10-2018 JV59_37925 d50a1189d4c80c52c3e6354d161ab59d 821 SUPERFAMILY SSF50249 227 650 2.06E-143 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_37925 d50a1189d4c80c52c3e6354d161ab59d 821 Pfam PF08461 Ribonuclease R winged-helix domain 27 88 2.4E-11 T 14-10-2018 IPR013668 Ribonuclease R winged-helix domain JV59_37925 d50a1189d4c80c52c3e6354d161ab59d 821 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 71 733 7.8E-255 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 JV59_37925 d50a1189d4c80c52c3e6354d161ab59d 821 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site JV59_37925 d50a1189d4c80c52c3e6354d161ab59d 821 SUPERFAMILY SSF50249 71 154 4.0E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_37925 d50a1189d4c80c52c3e6354d161ab59d 821 SUPERFAMILY SSF50249 651 738 2.36E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_37925 d50a1189d4c80c52c3e6354d161ab59d 821 SMART SM00357 90 152 1.6E-12 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 JV59_37925 d50a1189d4c80c52c3e6354d161ab59d 821 SMART SM00316 650 733 3.0E-14 T 14-10-2018 IPR022967 RNA-binding domain, S1 JV59_37925 d50a1189d4c80c52c3e6354d161ab59d 821 Gene3D G3DSA:2.40.50.140 653 764 4.7E-27 T 14-10-2018 JV59_23195 d45d88402372457cb73b4212730be6ec 345 SUPERFAMILY SSF52172 1 109 7.97E-28 T 14-10-2018 IPR011006 CheY-like superfamily JV59_23195 d45d88402372457cb73b4212730be6ec 345 PIRSF PIRSF000876 1 345 1.9E-129 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 JV59_23195 d45d88402372457cb73b4212730be6ec 345 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 344 37.801 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 JV59_23195 d45d88402372457cb73b4212730be6ec 345 Pfam PF01339 CheB methylesterase 160 339 5.4E-58 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 JV59_23195 d45d88402372457cb73b4212730be6ec 345 Gene3D G3DSA:3.40.50.180 149 345 3.5E-71 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal JV59_23195 d45d88402372457cb73b4212730be6ec 345 Pfam PF00072 Response regulator receiver domain 6 109 5.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_23195 d45d88402372457cb73b4212730be6ec 345 SUPERFAMILY SSF52738 156 344 1.96E-65 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal JV59_23195 d45d88402372457cb73b4212730be6ec 345 SMART SM00448 4 117 8.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_23195 d45d88402372457cb73b4212730be6ec 345 Gene3D G3DSA:3.40.50.2300 1 133 9.6E-31 T 14-10-2018 JV59_20105 46deeddf3582cd2cdf6e4f986ceca7ad 518 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 110 1.0E-10 T 14-10-2018 IPR000014 PAS domain JV59_20105 46deeddf3582cd2cdf6e4f986ceca7ad 518 Gene3D G3DSA:1.10.287.950 189 517 8.5E-67 T 14-10-2018 JV59_20105 46deeddf3582cd2cdf6e4f986ceca7ad 518 Gene3D G3DSA:3.30.450.20 15 116 4.9E-23 T 14-10-2018 JV59_20105 46deeddf3582cd2cdf6e4f986ceca7ad 518 SMART SM00283 248 516 4.8E-65 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_20105 46deeddf3582cd2cdf6e4f986ceca7ad 518 Pfam PF08447 PAS fold 31 114 4.0E-18 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 JV59_20105 46deeddf3582cd2cdf6e4f986ceca7ad 518 SUPERFAMILY SSF58104 229 517 1.12E-70 T 14-10-2018 JV59_20105 46deeddf3582cd2cdf6e4f986ceca7ad 518 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 269 298 1.3E-6 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_20105 46deeddf3582cd2cdf6e4f986ceca7ad 518 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 382 411 1.3E-6 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_20105 46deeddf3582cd2cdf6e4f986ceca7ad 518 SUPERFAMILY SSF55785 23 114 8.24E-25 T 14-10-2018 IPR035965 PAS domain superfamily JV59_20105 46deeddf3582cd2cdf6e4f986ceca7ad 518 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 299 483 2.3E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_30660 4b2c7df7084170d4c55cca41cd157b91 394 Pfam PF13641 Glycosyltransferase like family 2 58 278 8.1E-18 T 14-10-2018 JV59_30660 4b2c7df7084170d4c55cca41cd157b91 394 SUPERFAMILY SSF53448 57 322 2.06E-30 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_30660 4b2c7df7084170d4c55cca41cd157b91 394 Gene3D G3DSA:3.90.550.10 41 273 4.1E-20 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_19120 7c2cd1ced39ea86433ad7403e9b098a6 296 Gene3D G3DSA:3.40.190.290 129 288 2.1E-10 T 14-10-2018 JV59_19120 7c2cd1ced39ea86433ad7403e9b098a6 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.4E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_19120 7c2cd1ced39ea86433ad7403e9b098a6 296 Pfam PF03466 LysR substrate binding domain 124 290 4.4E-16 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_19120 7c2cd1ced39ea86433ad7403e9b098a6 296 Gene3D G3DSA:1.10.10.10 5 90 1.3E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_19120 7c2cd1ced39ea86433ad7403e9b098a6 296 SUPERFAMILY SSF53850 123 291 3.44E-19 T 14-10-2018 JV59_19120 7c2cd1ced39ea86433ad7403e9b098a6 296 SUPERFAMILY SSF46785 6 86 4.33E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_38205 f4f7f62b2633f28ebf4f455ed41673b6 144 Pfam PF09278 MerR, DNA binding 47 109 8.0E-18 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding JV59_38205 f4f7f62b2633f28ebf4f455ed41673b6 144 SUPERFAMILY SSF46955 2 121 3.37E-34 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily JV59_38205 f4f7f62b2633f28ebf4f455ed41673b6 144 Pfam PF00376 MerR family regulatory protein 4 40 4.4E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_38205 f4f7f62b2633f28ebf4f455ed41673b6 144 Gene3D G3DSA:1.10.1660.10 1 129 2.2E-36 T 14-10-2018 JV59_38205 f4f7f62b2633f28ebf4f455ed41673b6 144 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 1.7E-63 T 14-10-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 JV59_38205 f4f7f62b2633f28ebf4f455ed41673b6 144 SMART SM00422 2 71 9.1E-28 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_38205 f4f7f62b2633f28ebf4f455ed41673b6 144 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_38205 f4f7f62b2633f28ebf4f455ed41673b6 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 9.8E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_38205 f4f7f62b2633f28ebf4f455ed41673b6 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 9.8E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_38205 f4f7f62b2633f28ebf4f455ed41673b6 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 9.8E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_01430 303f386623493ea776ad09e958c5ded5 548 Pfam PF00437 Type II/IV secretion system protein 188 453 7.3E-88 T 14-10-2018 IPR001482 Type II/IV secretion system protein JV59_01430 303f386623493ea776ad09e958c5ded5 548 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 142 5.8E-13 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal JV59_01430 303f386623493ea776ad09e958c5ded5 548 Gene3D G3DSA:3.40.50.300 289 547 5.6E-102 T 14-10-2018 JV59_01430 303f386623493ea776ad09e958c5ded5 548 SUPERFAMILY SSF52540 175 546 1.77E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_01430 303f386623493ea776ad09e958c5ded5 548 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 382 396 - T 14-10-2018 IPR001482 Type II/IV secretion system protein JV59_01430 303f386623493ea776ad09e958c5ded5 548 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 7 546 6.7E-207 T 14-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 JV59_01430 303f386623493ea776ad09e958c5ded5 548 Gene3D G3DSA:3.30.300.160 58 139 1.3E-5 T 14-10-2018 JV59_01430 303f386623493ea776ad09e958c5ded5 548 Gene3D G3DSA:3.30.450.90 151 287 1.4E-45 T 14-10-2018 JV59_01430 303f386623493ea776ad09e958c5ded5 548 SUPERFAMILY SSF160246 6 139 2.51E-22 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily JV59_27385 cc9d91a4d7803027d69781b3073808f8 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 5.9E-24 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JV59_27385 cc9d91a4d7803027d69781b3073808f8 262 SUPERFAMILY SSF117143 92 223 5.75E-34 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like JV59_27385 cc9d91a4d7803027d69781b3073808f8 262 Pfam PF00460 Flagella basal body rod protein 5 35 4.6E-12 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 JV59_27385 cc9d91a4d7803027d69781b3073808f8 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 1.7E-116 T 14-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 JV59_27385 cc9d91a4d7803027d69781b3073808f8 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 3.0E-31 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G JV59_27385 cc9d91a4d7803027d69781b3073808f8 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 1.2E-40 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G JV59_27385 cc9d91a4d7803027d69781b3073808f8 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site JV59_17525 6d852776ec0d7152db86fa04dadedbfc 229 SUPERFAMILY SSF52172 3 154 3.98E-35 T 14-10-2018 IPR011006 CheY-like superfamily JV59_17525 6d852776ec0d7152db86fa04dadedbfc 229 Gene3D G3DSA:3.40.50.2300 1 119 8.8E-31 T 14-10-2018 JV59_17525 6d852776ec0d7152db86fa04dadedbfc 229 SUPERFAMILY SSF46894 135 227 1.05E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_17525 6d852776ec0d7152db86fa04dadedbfc 229 SMART SM00862 150 226 7.4E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_17525 6d852776ec0d7152db86fa04dadedbfc 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 226 5.9E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_17525 6d852776ec0d7152db86fa04dadedbfc 229 Gene3D G3DSA:1.10.10.10 120 229 7.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_17525 6d852776ec0d7152db86fa04dadedbfc 229 Pfam PF00072 Response regulator receiver domain 5 113 8.6E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_17525 6d852776ec0d7152db86fa04dadedbfc 229 SMART SM00448 3 113 3.8E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_25800 4bc19447e80fc861e086262e4d329ae9 240 Gene3D G3DSA:2.60.40.2020 8 101 6.6E-16 T 14-10-2018 IPR036331 Chagasin-like superfamily JV59_25800 4bc19447e80fc861e086262e4d329ae9 240 Pfam PF09394 Chagasin family peptidase inhibitor I42 9 88 5.8E-12 T 14-10-2018 IPR018990 Proteinase inhibitor I42, chagasin JV59_25800 4bc19447e80fc861e086262e4d329ae9 240 SUPERFAMILY SSF141066 7 98 2.09E-13 T 14-10-2018 IPR036331 Chagasin-like superfamily JV59_20965 56820790c1168ee8ec319780459f6cce 266 SUPERFAMILY SSF54001 4 256 4.09E-75 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily JV59_20965 56820790c1168ee8ec319780459f6cce 266 Gene3D G3DSA:2.40.128.150 86 180 1.2E-73 T 14-10-2018 JV59_20965 56820790c1168ee8ec319780459f6cce 266 PRINTS PR01543 Arylamine N-acetyltransferase signature 70 92 3.1E-8 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 JV59_20965 56820790c1168ee8ec319780459f6cce 266 PRINTS PR01543 Arylamine N-acetyltransferase signature 46 69 3.1E-8 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 JV59_20965 56820790c1168ee8ec319780459f6cce 266 PRINTS PR01543 Arylamine N-acetyltransferase signature 22 45 3.1E-8 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 JV59_20965 56820790c1168ee8ec319780459f6cce 266 Gene3D G3DSA:3.30.2140.10 6 250 1.2E-73 T 14-10-2018 JV59_20965 56820790c1168ee8ec319780459f6cce 266 Pfam PF00797 N-acetyltransferase 22 254 3.7E-68 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 JV59_18720 864ad0449f3a7d573f8cfcf1996fb5ba 663 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JV59_18720 864ad0449f3a7d573f8cfcf1996fb5ba 663 SUPERFAMILY SSF52922 532 663 6.94E-44 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JV59_18720 864ad0449f3a7d573f8cfcf1996fb5ba 663 Gene3D G3DSA:3.40.50.920 537 663 1.4E-45 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JV59_18720 864ad0449f3a7d573f8cfcf1996fb5ba 663 Gene3D G3DSA:3.40.50.970 1 324 7.1E-130 T 14-10-2018 JV59_18720 864ad0449f3a7d573f8cfcf1996fb5ba 663 SMART SM00861 353 524 4.3E-65 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JV59_18720 864ad0449f3a7d573f8cfcf1996fb5ba 663 Gene3D G3DSA:3.40.50.970 325 536 2.3E-83 T 14-10-2018 JV59_18720 864ad0449f3a7d573f8cfcf1996fb5ba 663 SUPERFAMILY SSF52518 333 525 1.22E-66 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_18720 864ad0449f3a7d573f8cfcf1996fb5ba 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 332 6.8E-166 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JV59_18720 864ad0449f3a7d573f8cfcf1996fb5ba 663 SUPERFAMILY SSF52518 5 318 2.52E-119 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_18720 864ad0449f3a7d573f8cfcf1996fb5ba 663 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JV59_18720 864ad0449f3a7d573f8cfcf1996fb5ba 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 4 662 0.0 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 JV59_18720 864ad0449f3a7d573f8cfcf1996fb5ba 663 Pfam PF02780 Transketolase, C-terminal domain 540 654 1.6E-20 T 14-10-2018 IPR033248 Transketolase, C-terminal domain JV59_18720 864ad0449f3a7d573f8cfcf1996fb5ba 663 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 2.7E-47 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JV59_17570 c8472483a5380675ed8f32bbb06e8bfb 307 Gene3D G3DSA:1.10.10.10 1 87 5.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_17570 c8472483a5380675ed8f32bbb06e8bfb 307 Pfam PF03466 LysR substrate binding domain 95 296 1.8E-24 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_17570 c8472483a5380675ed8f32bbb06e8bfb 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_17570 c8472483a5380675ed8f32bbb06e8bfb 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_17570 c8472483a5380675ed8f32bbb06e8bfb 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_17570 c8472483a5380675ed8f32bbb06e8bfb 307 Gene3D G3DSA:3.40.190.10 169 268 1.8E-51 T 14-10-2018 JV59_17570 c8472483a5380675ed8f32bbb06e8bfb 307 SUPERFAMILY SSF46785 3 85 1.82E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_17570 c8472483a5380675ed8f32bbb06e8bfb 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.0E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_17570 c8472483a5380675ed8f32bbb06e8bfb 307 Gene3D G3DSA:3.40.190.10 91 292 1.8E-51 T 14-10-2018 JV59_17570 c8472483a5380675ed8f32bbb06e8bfb 307 SUPERFAMILY SSF53850 89 293 1.25E-39 T 14-10-2018 JV59_19695 bdfdc968af499b0191c51a61343eb4a3 582 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 4 582 7.1E-205 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like JV59_19695 bdfdc968af499b0191c51a61343eb4a3 582 PIRSF PIRSF028304 1 582 2.0E-205 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like JV59_19695 bdfdc968af499b0191c51a61343eb4a3 582 Pfam PF05947 Type VI secretion system, TssF 5 580 3.9E-190 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like JV59_35630 65b035d4977e3e13554e1ed527923ead 46 Pfam PF11346 Protein of unknown function (DUF3149) 4 43 1.7E-16 T 14-10-2018 IPR021494 Protein of unknown function DUF3149 JV59_23125 fbabd45087a0df0809203bdc16f17974 307 SUPERFAMILY SSF51695 40 282 1.88E-9 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 JV59_17305 b1f4ee804131f7339c1d25d4c883b47e 515 Pfam PF11849 Domain of unknown function (DUF3369) 150 316 1.6E-43 T 14-10-2018 IPR021800 Domain of unknown function DUF3369 JV59_17305 b1f4ee804131f7339c1d25d4c883b47e 515 SMART SM00471 336 473 2.5E-4 T 14-10-2018 IPR003607 HD/PDEase domain JV59_17305 b1f4ee804131f7339c1d25d4c883b47e 515 Gene3D G3DSA:1.10.3210.10 316 515 1.1E-66 T 14-10-2018 JV59_17305 b1f4ee804131f7339c1d25d4c883b47e 515 SUPERFAMILY SSF109604 326 502 6.91E-36 T 14-10-2018 JV59_17305 b1f4ee804131f7339c1d25d4c883b47e 515 Gene3D G3DSA:3.40.50.2300 17 169 1.8E-12 T 14-10-2018 JV59_17305 b1f4ee804131f7339c1d25d4c883b47e 515 Pfam PF13487 HD domain 391 454 1.6E-19 T 14-10-2018 JV59_17305 b1f4ee804131f7339c1d25d4c883b47e 515 SUPERFAMILY SSF52172 26 182 1.71E-9 T 14-10-2018 IPR011006 CheY-like superfamily JV59_18590 a90f88f0500c7286bd7cce39c78779be 280 SMART SM00382 34 216 5.1E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_18590 a90f88f0500c7286bd7cce39c78779be 280 SUPERFAMILY SSF52540 6 234 2.23E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_18590 a90f88f0500c7286bd7cce39c78779be 280 Pfam PF00005 ABC transporter 25 166 3.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_18590 a90f88f0500c7286bd7cce39c78779be 280 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 25 254 6.1E-106 T 14-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 JV59_18590 a90f88f0500c7286bd7cce39c78779be 280 Gene3D G3DSA:3.40.50.300 3 279 3.4E-62 T 14-10-2018 JV59_18590 a90f88f0500c7286bd7cce39c78779be 280 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_35200 b1c06a227e55631f20c255ecdf8fefd7 680 PRINTS PR01007 Flagellar hook-length control protein signature 286 299 5.2E-8 T 14-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 JV59_35200 b1c06a227e55631f20c255ecdf8fefd7 680 PRINTS PR01007 Flagellar hook-length control protein signature 598 621 5.2E-8 T 14-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 JV59_35200 b1c06a227e55631f20c255ecdf8fefd7 680 PRINTS PR01007 Flagellar hook-length control protein signature 565 583 5.2E-8 T 14-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 JV59_35200 b1c06a227e55631f20c255ecdf8fefd7 680 Pfam PF02120 Flagellar hook-length control protein FliK 550 633 4.4E-26 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal JV59_35200 b1c06a227e55631f20c255ecdf8fefd7 680 Gene3D G3DSA:3.30.750.140 528 641 6.8E-33 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily JV59_39650 9c0f4f2e1dd9af93b9acb6d04f6828dc 205 SUPERFAMILY SSF46626 114 203 2.62E-21 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_39650 9c0f4f2e1dd9af93b9acb6d04f6828dc 205 Pfam PF00034 Cytochrome c 117 201 4.0E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_39650 9c0f4f2e1dd9af93b9acb6d04f6828dc 205 Pfam PF00034 Cytochrome c 25 103 2.9E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_39650 9c0f4f2e1dd9af93b9acb6d04f6828dc 205 PRINTS PR00605 Class IC cytochrome C signature 30 41 5.8E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 JV59_39650 9c0f4f2e1dd9af93b9acb6d04f6828dc 205 PRINTS PR00605 Class IC cytochrome C signature 179 201 5.8E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 JV59_39650 9c0f4f2e1dd9af93b9acb6d04f6828dc 205 SUPERFAMILY SSF46626 6 105 2.4E-21 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_39650 9c0f4f2e1dd9af93b9acb6d04f6828dc 205 Gene3D G3DSA:1.10.760.10 19 108 7.8E-25 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_39650 9c0f4f2e1dd9af93b9acb6d04f6828dc 205 PIRSF PIRSF000005 1 205 7.4E-65 T 14-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 JV59_39650 9c0f4f2e1dd9af93b9acb6d04f6828dc 205 Gene3D G3DSA:1.10.760.10 109 205 3.0E-27 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_35930 bed581f9eb573bbb84916805942bf7e9 204 PIRSF PIRSF006170 1 204 2.2E-52 T 14-10-2018 IPR026039 Uncharacterised protein family UPF0070 JV59_35930 bed581f9eb573bbb84916805942bf7e9 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 2.5E-56 T 14-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 JV59_35930 bed581f9eb573bbb84916805942bf7e9 204 Gene3D G3DSA:1.25.40.10 27 203 9.0E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_35930 bed581f9eb573bbb84916805942bf7e9 204 SUPERFAMILY SSF48452 89 189 1.03E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_24060 19d2fb47e4590c574727472e204423d6 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 1.0E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_24060 19d2fb47e4590c574727472e204423d6 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 1.0E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_24060 19d2fb47e4590c574727472e204423d6 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 1.0E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_24060 19d2fb47e4590c574727472e204423d6 237 SMART SM00421 152 209 1.7E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_24060 19d2fb47e4590c574727472e204423d6 237 Gene3D G3DSA:1.10.10.10 142 214 4.0E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_24060 19d2fb47e4590c574727472e204423d6 237 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 1.2E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_24060 19d2fb47e4590c574727472e204423d6 237 Pfam PF08448 PAS fold 9 120 3.3E-20 T 14-10-2018 IPR013656 PAS fold-4 JV59_24060 19d2fb47e4590c574727472e204423d6 237 SUPERFAMILY SSF46894 146 214 4.08E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_24060 19d2fb47e4590c574727472e204423d6 237 Gene3D G3DSA:3.30.450.20 2 124 1.0E-10 T 14-10-2018 JV59_24060 19d2fb47e4590c574727472e204423d6 237 SUPERFAMILY SSF55785 8 119 8.2E-10 T 14-10-2018 IPR035965 PAS domain superfamily JV59_19970 2535a5462c72ef3cb32a1b56030470da 299 SUPERFAMILY SSF53850 88 292 8.07E-44 T 14-10-2018 JV59_19970 2535a5462c72ef3cb32a1b56030470da 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 9.8E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_19970 2535a5462c72ef3cb32a1b56030470da 299 Pfam PF03466 LysR substrate binding domain 88 291 5.1E-43 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_19970 2535a5462c72ef3cb32a1b56030470da 299 Gene3D G3DSA:3.40.190.290 90 292 8.8E-63 T 14-10-2018 JV59_19970 2535a5462c72ef3cb32a1b56030470da 299 SUPERFAMILY SSF46785 2 87 5.56E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_19970 2535a5462c72ef3cb32a1b56030470da 299 Gene3D G3DSA:1.10.10.10 1 85 1.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_38570 849e1f0d0d620d20eec230c49dc9b026 371 Gene3D G3DSA:3.40.50.2000 171 359 7.1E-39 T 14-10-2018 JV59_38570 849e1f0d0d620d20eec230c49dc9b026 371 Pfam PF13439 Glycosyltransferase Family 4 16 166 3.0E-13 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 JV59_38570 849e1f0d0d620d20eec230c49dc9b026 371 Pfam PF00534 Glycosyl transferases group 1 179 344 4.9E-27 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 JV59_38570 849e1f0d0d620d20eec230c49dc9b026 371 SUPERFAMILY SSF53756 6 371 1.03E-66 T 14-10-2018 JV59_38570 849e1f0d0d620d20eec230c49dc9b026 371 Gene3D G3DSA:3.40.50.2000 4 170 1.6E-13 T 14-10-2018 JV59_21960 f1efaba7f8ff3df85fbf3477eba1dd09 707 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 53 707 1.8E-74 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 JV59_21960 f1efaba7f8ff3df85fbf3477eba1dd09 707 Gene3D G3DSA:2.40.170.20 168 707 2.6E-53 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily JV59_21960 f1efaba7f8ff3df85fbf3477eba1dd09 707 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 154 6.8E-19 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain JV59_21960 f1efaba7f8ff3df85fbf3477eba1dd09 707 Gene3D G3DSA:2.170.130.10 28 165 1.5E-23 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily JV59_21960 f1efaba7f8ff3df85fbf3477eba1dd09 707 Pfam PF00593 TonB dependent receptor 246 706 1.4E-31 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel JV59_21960 f1efaba7f8ff3df85fbf3477eba1dd09 707 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 690 707 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site JV59_21960 f1efaba7f8ff3df85fbf3477eba1dd09 707 SUPERFAMILY SSF56935 28 707 1.83E-94 T 14-10-2018 JV59_39920 7667e7ad97f38738bfdc699786f040a2 89 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 JV59_39920 7667e7ad97f38738bfdc699786f040a2 89 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 79 1.2E-14 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JV59_39920 7667e7ad97f38738bfdc699786f040a2 89 Gene3D G3DSA:3.10.20.30 1 89 1.1E-23 T 14-10-2018 IPR012675 Beta-grasp domain superfamily JV59_39920 7667e7ad97f38738bfdc699786f040a2 89 SUPERFAMILY SSF54292 1 87 1.02E-25 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JV59_33540 a2e1d95c4fa666febb69b399a3012e1a 99 Gene3D G3DSA:3.30.70.100 1 94 1.3E-20 T 14-10-2018 JV59_33540 a2e1d95c4fa666febb69b399a3012e1a 99 SUPERFAMILY SSF54909 4 88 6.26E-20 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_33540 a2e1d95c4fa666febb69b399a3012e1a 99 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 79 5.5E-12 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain JV59_23735 c1ad1809be753e1df059ce54cfd70ee9 562 Pfam PF00082 Subtilase family 154 384 5.0E-40 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 JV59_23735 c1ad1809be753e1df059ce54cfd70ee9 562 SUPERFAMILY SSF52743 139 397 2.62E-76 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 JV59_23735 c1ad1809be753e1df059ce54cfd70ee9 562 Gene3D G3DSA:2.60.40.10 413 509 1.3E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_23735 c1ad1809be753e1df059ce54cfd70ee9 562 Gene3D G3DSA:3.40.50.200 128 412 2.8E-84 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 JV59_23735 c1ad1809be753e1df059ce54cfd70ee9 562 Pfam PF05922 Peptidase inhibitor I9 28 114 3.3E-9 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 JV59_23735 c1ad1809be753e1df059ce54cfd70ee9 562 Gene3D G3DSA:2.10.10.20 511 554 2.4E-12 T 14-10-2018 JV59_23735 c1ad1809be753e1df059ce54cfd70ee9 562 SUPERFAMILY SSF54897 76 115 4.53E-6 T 14-10-2018 JV59_23735 c1ad1809be753e1df059ce54cfd70ee9 562 SMART SM00495 510 556 1.6E-5 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_23735 c1ad1809be753e1df059ce54cfd70ee9 562 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 196 206 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site JV59_23735 c1ad1809be753e1df059ce54cfd70ee9 562 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 348 358 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site JV59_23735 c1ad1809be753e1df059ce54cfd70ee9 562 Gene3D G3DSA:3.30.70.80 20 116 3.8E-6 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 JV59_23735 c1ad1809be753e1df059ce54cfd70ee9 562 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 159 170 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site JV59_23735 c1ad1809be753e1df059ce54cfd70ee9 562 SUPERFAMILY SSF51055 510 556 3.92E-8 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_23735 c1ad1809be753e1df059ce54cfd70ee9 562 PRINTS PR00723 Subtilisin serine protease family (S8) signature 347 363 2.1E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related JV59_23735 c1ad1809be753e1df059ce54cfd70ee9 562 PRINTS PR00723 Subtilisin serine protease family (S8) signature 154 173 2.1E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related JV59_23735 c1ad1809be753e1df059ce54cfd70ee9 562 PRINTS PR00723 Subtilisin serine protease family (S8) signature 192 205 2.1E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related JV59_27810 1e58a8d09e8c36fd3fd3a9fa7780a6ec 274 Gene3D G3DSA:2.60.40.2540 1 139 2.7E-13 T 14-10-2018 JV59_27810 1e58a8d09e8c36fd3fd3a9fa7780a6ec 274 Gene3D G3DSA:3.30.1330.60 141 260 1.3E-31 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_27810 1e58a8d09e8c36fd3fd3a9fa7780a6ec 274 Pfam PF00691 OmpA family 152 247 3.5E-18 T 14-10-2018 IPR006665 OmpA-like domain JV59_27810 1e58a8d09e8c36fd3fd3a9fa7780a6ec 274 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 52 70 1.0E-13 T 14-10-2018 JV59_27810 1e58a8d09e8c36fd3fd3a9fa7780a6ec 274 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 14 32 1.0E-13 T 14-10-2018 JV59_27810 1e58a8d09e8c36fd3fd3a9fa7780a6ec 274 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 236 256 1.0E-13 T 14-10-2018 JV59_27810 1e58a8d09e8c36fd3fd3a9fa7780a6ec 274 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 169 195 1.0E-13 T 14-10-2018 JV59_27810 1e58a8d09e8c36fd3fd3a9fa7780a6ec 274 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 216 235 1.0E-13 T 14-10-2018 JV59_27810 1e58a8d09e8c36fd3fd3a9fa7780a6ec 274 SUPERFAMILY SSF103088 126 252 2.62E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_27810 1e58a8d09e8c36fd3fd3a9fa7780a6ec 274 PRINTS PR01021 OMPA domain signature 152 174 4.1E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_27810 1e58a8d09e8c36fd3fd3a9fa7780a6ec 274 PRINTS PR01021 OMPA domain signature 183 198 4.1E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_27810 1e58a8d09e8c36fd3fd3a9fa7780a6ec 274 PRINTS PR01021 OMPA domain signature 198 214 4.1E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_37485 8ab4b4c7f67a91b1211b5f7816746356 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_37485 8ab4b4c7f67a91b1211b5f7816746356 241 Pfam PF00005 ABC transporter 20 166 3.4E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_37485 8ab4b4c7f67a91b1211b5f7816746356 241 Gene3D G3DSA:3.40.50.300 2 241 2.3E-71 T 14-10-2018 JV59_37485 8ab4b4c7f67a91b1211b5f7816746356 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 4.2E-9 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal JV59_37485 8ab4b4c7f67a91b1211b5f7816746356 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 3.0E-125 T 14-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 JV59_37485 8ab4b4c7f67a91b1211b5f7816746356 241 SMART SM00382 28 231 1.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_37485 8ab4b4c7f67a91b1211b5f7816746356 241 SUPERFAMILY SSF52540 4 237 1.7E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_19610 4fc44b1d29dec3fc8534b863c8aff170 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 188 0.0011 T 14-10-2018 JV59_19610 4fc44b1d29dec3fc8534b863c8aff170 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.3E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_19610 4fc44b1d29dec3fc8534b863c8aff170 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 4.3E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_19610 4fc44b1d29dec3fc8534b863c8aff170 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 4.3E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_19610 4fc44b1d29dec3fc8534b863c8aff170 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.3E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_19610 4fc44b1d29dec3fc8534b863c8aff170 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.3E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_19610 4fc44b1d29dec3fc8534b863c8aff170 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.3E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_19610 4fc44b1d29dec3fc8534b863c8aff170 246 SUPERFAMILY SSF51735 2 245 4.07E-77 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_19610 4fc44b1d29dec3fc8534b863c8aff170 246 Gene3D G3DSA:3.40.50.720 1 245 3.3E-75 T 14-10-2018 JV59_19610 4fc44b1d29dec3fc8534b863c8aff170 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 245 7.6E-117 T 14-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 JV59_19610 4fc44b1d29dec3fc8534b863c8aff170 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.7E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_19610 4fc44b1d29dec3fc8534b863c8aff170 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.7E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_19610 4fc44b1d29dec3fc8534b863c8aff170 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.7E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_19610 4fc44b1d29dec3fc8534b863c8aff170 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 243 6.7E-58 T 14-10-2018 JV59_19610 4fc44b1d29dec3fc8534b863c8aff170 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JV59_36035 97c2d683875573bccde49f79747f1891 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 5.8E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_36035 97c2d683875573bccde49f79747f1891 314 SUPERFAMILY SSF53850 92 303 2.35E-20 T 14-10-2018 JV59_36035 97c2d683875573bccde49f79747f1891 314 SUPERFAMILY SSF46785 7 88 2.04E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_36035 97c2d683875573bccde49f79747f1891 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 3.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_36035 97c2d683875573bccde49f79747f1891 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 3.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_36035 97c2d683875573bccde49f79747f1891 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 3.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_36035 97c2d683875573bccde49f79747f1891 314 Gene3D G3DSA:3.40.190.10 93 297 2.5E-21 T 14-10-2018 JV59_36035 97c2d683875573bccde49f79747f1891 314 Pfam PF03466 LysR substrate binding domain 100 299 2.0E-12 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_36035 97c2d683875573bccde49f79747f1891 314 Gene3D G3DSA:3.40.190.10 173 273 2.5E-21 T 14-10-2018 JV59_36035 97c2d683875573bccde49f79747f1891 314 Gene3D G3DSA:1.10.10.10 2 91 4.8E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_01145 effa215e77e6a9ba0aabf33caebadb97 359 Gene3D G3DSA:3.40.190.10 155 326 5.5E-116 T 14-10-2018 JV59_01145 effa215e77e6a9ba0aabf33caebadb97 359 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 39 326 3.6E-74 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 JV59_01145 effa215e77e6a9ba0aabf33caebadb97 359 PIRSF PIRSF039026 2 359 1.6E-133 T 14-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like JV59_01145 effa215e77e6a9ba0aabf33caebadb97 359 SUPERFAMILY SSF53850 157 265 1.18E-5 T 14-10-2018 JV59_01145 effa215e77e6a9ba0aabf33caebadb97 359 Gene3D G3DSA:3.40.190.170 37 347 5.5E-116 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily JV59_01785 61e7c928a2a612d61defa474dadfb3d0 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 19 504 43.233 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JV59_01785 61e7c928a2a612d61defa474dadfb3d0 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 504 4.2E-201 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JV59_01785 61e7c928a2a612d61defa474dadfb3d0 505 Gene3D G3DSA:3.30.930.10 151 501 9.3E-130 T 14-10-2018 JV59_01785 61e7c928a2a612d61defa474dadfb3d0 505 SUPERFAMILY SSF50249 12 149 2.45E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_01785 61e7c928a2a612d61defa474dadfb3d0 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 156 501 1.6E-78 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_01785 61e7c928a2a612d61defa474dadfb3d0 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 140 3.2E-7 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 JV59_01785 61e7c928a2a612d61defa474dadfb3d0 505 Gene3D G3DSA:2.40.50.140 5 150 3.0E-29 T 14-10-2018 JV59_01785 61e7c928a2a612d61defa474dadfb3d0 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 209 225 6.9E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JV59_01785 61e7c928a2a612d61defa474dadfb3d0 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 6.9E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JV59_01785 61e7c928a2a612d61defa474dadfb3d0 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 193 203 6.9E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JV59_01785 61e7c928a2a612d61defa474dadfb3d0 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 256 273 6.9E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JV59_01785 61e7c928a2a612d61defa474dadfb3d0 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 238 251 6.9E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JV59_01785 61e7c928a2a612d61defa474dadfb3d0 505 SUPERFAMILY SSF55681 156 502 5.17E-116 T 14-10-2018 JV59_27380 2aaa37ff6e6921bdbe7bbe3b3aba7003 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 242 4.1E-22 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JV59_27380 2aaa37ff6e6921bdbe7bbe3b3aba7003 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 7.8E-32 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G JV59_27380 2aaa37ff6e6921bdbe7bbe3b3aba7003 249 SUPERFAMILY SSF117143 77 207 7.32E-15 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like JV59_27380 2aaa37ff6e6921bdbe7bbe3b3aba7003 249 Pfam PF00460 Flagella basal body rod protein 8 35 2.1E-5 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 JV59_33180 699d04bdc0b7c0ba7b94cc858757d44f 595 SUPERFAMILY SSF52540 350 580 3.48E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_33180 699d04bdc0b7c0ba7b94cc858757d44f 595 Pfam PF00664 ABC transporter transmembrane region 25 292 1.3E-42 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JV59_33180 699d04bdc0b7c0ba7b94cc858757d44f 595 SMART SM00382 375 558 2.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_33180 699d04bdc0b7c0ba7b94cc858757d44f 595 Gene3D G3DSA:1.20.1560.10 1 333 2.5E-52 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_33180 699d04bdc0b7c0ba7b94cc858757d44f 595 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 554 1.4E-174 T 14-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 JV59_33180 699d04bdc0b7c0ba7b94cc858757d44f 595 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_33180 699d04bdc0b7c0ba7b94cc858757d44f 595 Gene3D G3DSA:3.40.50.300 342 593 5.6E-68 T 14-10-2018 JV59_33180 699d04bdc0b7c0ba7b94cc858757d44f 595 SUPERFAMILY SSF90123 5 330 8.76E-56 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_33180 699d04bdc0b7c0ba7b94cc858757d44f 595 Pfam PF00005 ABC transporter 368 512 2.9E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_33105 42e7e3276bbc7c918652fbbb6d585ea1 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 JV59_33105 42e7e3276bbc7c918652fbbb6d585ea1 396 Gene3D G3DSA:3.40.640.10 45 315 2.5E-157 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_33105 42e7e3276bbc7c918652fbbb6d585ea1 396 Pfam PF00155 Aminotransferase class I and II 27 392 6.4E-82 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JV59_33105 42e7e3276bbc7c918652fbbb6d585ea1 396 Gene3D G3DSA:3.90.1150.10 11 391 2.5E-157 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_33105 42e7e3276bbc7c918652fbbb6d585ea1 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 2.3E-38 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 JV59_33105 42e7e3276bbc7c918652fbbb6d585ea1 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 2.3E-38 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 JV59_33105 42e7e3276bbc7c918652fbbb6d585ea1 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 2.3E-38 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 JV59_33105 42e7e3276bbc7c918652fbbb6d585ea1 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 2.3E-38 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 JV59_33105 42e7e3276bbc7c918652fbbb6d585ea1 396 SUPERFAMILY SSF53383 1 395 5.76E-109 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_37980 338cb32806bbe587e23eeb85682c6693 325 SUPERFAMILY SSF53474 32 299 3.95E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_37980 338cb32806bbe587e23eeb85682c6693 325 Pfam PF00561 alpha/beta hydrolase fold 61 301 6.9E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_37980 338cb32806bbe587e23eeb85682c6693 325 PIRSF PIRSF005211 1 324 7.4E-102 T 14-10-2018 IPR012020 AB hydrolase 4 family JV59_29615 70f65fb2e3adf13af57f93dc50763e98 275 Pfam PF01116 Fructose-bisphosphate aldolase class-II 3 273 6.8E-71 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 JV59_29615 70f65fb2e3adf13af57f93dc50763e98 275 Gene3D G3DSA:3.20.20.70 1 275 4.9E-77 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_29615 70f65fb2e3adf13af57f93dc50763e98 275 SUPERFAMILY SSF51569 2 273 1.35E-75 T 14-10-2018 JV59_29615 70f65fb2e3adf13af57f93dc50763e98 275 PIRSF PIRSF001359 1 275 1.7E-63 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 JV59_34455 5a0221f0ad93f85f24fa6a5a60004d6f 476 SUPERFAMILY SSF55604 399 472 5.75E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 JV59_34455 5a0221f0ad93f85f24fa6a5a60004d6f 476 Pfam PF00367 phosphotransferase system, EIIB 402 434 2.4E-12 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 JV59_34455 5a0221f0ad93f85f24fa6a5a60004d6f 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 412 429 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 JV59_34455 5a0221f0ad93f85f24fa6a5a60004d6f 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 377 458 3.5E-20 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 JV59_34455 5a0221f0ad93f85f24fa6a5a60004d6f 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 9.4E-74 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 JV59_34455 5a0221f0ad93f85f24fa6a5a60004d6f 476 Gene3D G3DSA:3.30.1360.60 394 475 5.9E-29 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 JV59_34455 5a0221f0ad93f85f24fa6a5a60004d6f 476 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 2.1E-196 T 14-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 JV59_23060 2c59ede6905692b2385b5eaf2fe26479 113 SUPERFAMILY SSF46785 17 105 2.48E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_23060 2c59ede6905692b2385b5eaf2fe26479 113 Gene3D G3DSA:1.10.10.10 4 108 4.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_23060 2c59ede6905692b2385b5eaf2fe26479 113 Pfam PF01638 HxlR-like helix-turn-helix 26 107 3.9E-16 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type JV59_22570 06784d2d7cc26dda8dd2999faf5df76f 283 Pfam PF13478 XdhC Rossmann domain 108 250 8.0E-37 T 14-10-2018 IPR027051 XdhC Rossmann domain JV59_22570 06784d2d7cc26dda8dd2999faf5df76f 283 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 21 251 9.1E-93 T 14-10-2018 IPR014308 Xanthine dehydrogenase accessory protein XdhC JV59_22570 06784d2d7cc26dda8dd2999faf5df76f 283 Pfam PF02625 XdhC and CoxI family 16 74 8.8E-16 T 14-10-2018 IPR003777 XdhC- CoxI JV59_22570 06784d2d7cc26dda8dd2999faf5df76f 283 Gene3D G3DSA:3.40.50.720 107 256 8.6E-38 T 14-10-2018 JV59_18390 4cd0f7808a4eaf510eeea05d8592dd3a 236 SUPERFAMILY SSF51182 18 160 1.64E-7 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JV59_18390 4cd0f7808a4eaf510eeea05d8592dd3a 236 Gene3D G3DSA:1.10.10.60 128 185 1.4E-12 T 14-10-2018 JV59_18390 4cd0f7808a4eaf510eeea05d8592dd3a 236 SUPERFAMILY SSF46689 135 186 3.36E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_18390 4cd0f7808a4eaf510eeea05d8592dd3a 236 SMART SM00342 152 235 2.7E-30 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_18390 4cd0f7808a4eaf510eeea05d8592dd3a 236 Pfam PF12833 Helix-turn-helix domain 158 235 4.7E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_18390 4cd0f7808a4eaf510eeea05d8592dd3a 236 SUPERFAMILY SSF46689 189 235 6.72E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_18390 4cd0f7808a4eaf510eeea05d8592dd3a 236 Gene3D G3DSA:2.60.120.10 10 72 5.1E-7 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_18390 4cd0f7808a4eaf510eeea05d8592dd3a 236 Gene3D G3DSA:1.10.10.60 186 236 4.6E-15 T 14-10-2018 JV59_40250 4d56a6c35fe5064465259a7f24b9f802 555 PRINTS PR01165 Cytochrome c oxidase subunit I signature 197 215 7.1E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_40250 4d56a6c35fe5064465259a7f24b9f802 555 PRINTS PR01165 Cytochrome c oxidase subunit I signature 226 245 7.1E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_40250 4d56a6c35fe5064465259a7f24b9f802 555 PRINTS PR01165 Cytochrome c oxidase subunit I signature 167 179 7.1E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_40250 4d56a6c35fe5064465259a7f24b9f802 555 PRINTS PR01165 Cytochrome c oxidase subunit I signature 277 298 7.1E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_40250 4d56a6c35fe5064465259a7f24b9f802 555 PRINTS PR01165 Cytochrome c oxidase subunit I signature 460 481 7.1E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_40250 4d56a6c35fe5064465259a7f24b9f802 555 PRINTS PR01165 Cytochrome c oxidase subunit I signature 410 429 7.1E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_40250 4d56a6c35fe5064465259a7f24b9f802 555 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 7.1E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_40250 4d56a6c35fe5064465259a7f24b9f802 555 PRINTS PR01165 Cytochrome c oxidase subunit I signature 347 368 7.1E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_40250 4d56a6c35fe5064465259a7f24b9f802 555 PRINTS PR01165 Cytochrome c oxidase subunit I signature 382 400 7.1E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_40250 4d56a6c35fe5064465259a7f24b9f802 555 PRINTS PR01165 Cytochrome c oxidase subunit I signature 50 75 7.1E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_40250 4d56a6c35fe5064465259a7f24b9f802 555 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 7.1E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_40250 4d56a6c35fe5064465259a7f24b9f802 555 PRINTS PR01165 Cytochrome c oxidase subunit I signature 323 338 7.1E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_40250 4d56a6c35fe5064465259a7f24b9f802 555 Gene3D G3DSA:1.20.210.10 37 555 1.5E-220 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_40250 4d56a6c35fe5064465259a7f24b9f802 555 SUPERFAMILY SSF81442 47 554 9.55E-195 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_40250 4d56a6c35fe5064465259a7f24b9f802 555 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 59 501 4.9E-151 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_40250 4d56a6c35fe5064465259a7f24b9f802 555 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 51 554 1.9E-214 T 14-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 JV59_40250 4d56a6c35fe5064465259a7f24b9f802 555 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 279 333 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_34750 47dec4eafa1d4bb4a33adad0eb27dfff 447 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JV59_34750 47dec4eafa1d4bb4a33adad0eb27dfff 447 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site JV59_34750 47dec4eafa1d4bb4a33adad0eb27dfff 447 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JV59_34750 47dec4eafa1d4bb4a33adad0eb27dfff 447 Gene3D G3DSA:3.40.50.2300 2 129 5.0E-28 T 14-10-2018 JV59_34750 47dec4eafa1d4bb4a33adad0eb27dfff 447 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 5.8E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_34750 47dec4eafa1d4bb4a33adad0eb27dfff 447 Gene3D G3DSA:1.10.10.60 389 442 5.3E-12 T 14-10-2018 JV59_34750 47dec4eafa1d4bb4a33adad0eb27dfff 447 SMART SM00382 164 308 4.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_34750 47dec4eafa1d4bb4a33adad0eb27dfff 447 Gene3D G3DSA:3.40.50.300 130 315 2.2E-61 T 14-10-2018 JV59_34750 47dec4eafa1d4bb4a33adad0eb27dfff 447 SUPERFAMILY SSF52540 144 374 1.84E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_34750 47dec4eafa1d4bb4a33adad0eb27dfff 447 Pfam PF00158 Sigma-54 interaction domain 144 310 1.1E-69 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JV59_34750 47dec4eafa1d4bb4a33adad0eb27dfff 447 Gene3D G3DSA:1.10.8.60 316 388 2.1E-19 T 14-10-2018 JV59_34750 47dec4eafa1d4bb4a33adad0eb27dfff 447 SMART SM00448 2 114 1.3E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_34750 47dec4eafa1d4bb4a33adad0eb27dfff 447 SUPERFAMILY SSF46689 355 440 6.09E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_34750 47dec4eafa1d4bb4a33adad0eb27dfff 447 SUPERFAMILY SSF52172 1 188 2.13E-34 T 14-10-2018 IPR011006 CheY-like superfamily JV59_34750 47dec4eafa1d4bb4a33adad0eb27dfff 447 Pfam PF00072 Response regulator receiver domain 4 113 5.7E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_35585 c6eeb1e3d4989a5d6a024d1c76bca8bf 524 Pfam PF00367 phosphotransferase system, EIIB 441 474 1.4E-12 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 JV59_35585 c6eeb1e3d4989a5d6a024d1c76bca8bf 524 SUPERFAMILY SSF55604 439 511 6.8E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 JV59_35585 c6eeb1e3d4989a5d6a024d1c76bca8bf 524 Pfam PF02378 Phosphotransferase system, EIIC 11 353 9.1E-65 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 JV59_35585 c6eeb1e3d4989a5d6a024d1c76bca8bf 524 Gene3D G3DSA:3.30.1360.60 435 514 1.7E-24 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 JV59_35585 c6eeb1e3d4989a5d6a024d1c76bca8bf 524 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 411 499 8.7E-21 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 JV59_35585 c6eeb1e3d4989a5d6a024d1c76bca8bf 524 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 452 469 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 JV59_35585 c6eeb1e3d4989a5d6a024d1c76bca8bf 524 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 510 9.4E-210 T 14-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 JV59_39625 c745f5c16010e3a9d7aa3a213de33e91 253 Gene3D G3DSA:3.20.20.140 1 253 1.2E-79 T 14-10-2018 JV59_39625 c745f5c16010e3a9d7aa3a213de33e91 253 Pfam PF01026 TatD related DNase 2 252 1.4E-64 T 14-10-2018 IPR001130 TatD family GO:0016788 JV59_39625 c745f5c16010e3a9d7aa3a213de33e91 253 PIRSF PIRSF005902 1 253 4.6E-71 T 14-10-2018 IPR001130 TatD family GO:0016788 JV59_39625 c745f5c16010e3a9d7aa3a213de33e91 253 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 252 1.6E-71 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 JV59_39625 c745f5c16010e3a9d7aa3a213de33e91 253 SUPERFAMILY SSF51556 1 252 7.85E-80 T 14-10-2018 IPR032466 Metal-dependent hydrolase JV59_21015 bac2bdf49c4e37e06556eff71b613981 487 Gene3D G3DSA:1.25.40.80 164 278 4.2E-15 T 14-10-2018 JV59_21015 bac2bdf49c4e37e06556eff71b613981 487 PRINTS PR00147 DNA photolyase signature 316 332 1.8E-7 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 JV59_21015 bac2bdf49c4e37e06556eff71b613981 487 PRINTS PR00147 DNA photolyase signature 336 354 1.8E-7 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 JV59_21015 bac2bdf49c4e37e06556eff71b613981 487 Gene3D G3DSA:1.10.579.10 291 479 3.6E-59 T 14-10-2018 JV59_21015 bac2bdf49c4e37e06556eff71b613981 487 Pfam PF03441 FAD binding domain of DNA photolyase 264 463 4.8E-57 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 JV59_21015 bac2bdf49c4e37e06556eff71b613981 487 SUPERFAMILY SSF52425 3 194 1.44E-37 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 JV59_21015 bac2bdf49c4e37e06556eff71b613981 487 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 316 328 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal JV59_21015 bac2bdf49c4e37e06556eff71b613981 487 Pfam PF00875 DNA photolyase 6 133 2.0E-17 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 JV59_21015 bac2bdf49c4e37e06556eff71b613981 487 Gene3D G3DSA:3.40.50.620 1 129 5.1E-24 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_21015 bac2bdf49c4e37e06556eff71b613981 487 SUPERFAMILY SSF48173 191 468 1.57E-80 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 JV59_19465 cdce575123b19f89e2e8f753286a536b 504 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 6.3E-226 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 JV59_19465 cdce575123b19f89e2e8f753286a536b 504 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 JV59_19465 cdce575123b19f89e2e8f753286a536b 504 PIRSF PIRSF000538 4 503 7.8E-175 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 JV59_19465 cdce575123b19f89e2e8f753286a536b 504 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 57.828 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 JV59_19465 cdce575123b19f89e2e8f753286a536b 504 SUPERFAMILY SSF53067 255 497 6.31E-85 T 14-10-2018 JV59_19465 cdce575123b19f89e2e8f753286a536b 504 Gene3D G3DSA:3.30.420.40 2 254 1.3E-110 T 14-10-2018 JV59_19465 cdce575123b19f89e2e8f753286a536b 504 SUPERFAMILY SSF53067 5 256 1.2E-92 T 14-10-2018 JV59_19465 cdce575123b19f89e2e8f753286a536b 504 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 4.4E-85 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 JV59_19465 cdce575123b19f89e2e8f753286a536b 504 Gene3D G3DSA:3.30.420.40 255 501 5.6E-93 T 14-10-2018 JV59_19465 cdce575123b19f89e2e8f753286a536b 504 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 JV59_19465 cdce575123b19f89e2e8f753286a536b 504 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 4.6E-60 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 JV59_25150 ac2d0a9c9358a895c7fab0baa0f47c65 114 Pfam PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) 9 107 7.5E-12 T 14-10-2018 IPR014115 Type-F conjugative transfer system protein TrbI JV59_36380 b57d83c5ed6aea97661ac154629a1eff 245 Pfam PF12833 Helix-turn-helix domain 164 243 1.9E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_36380 b57d83c5ed6aea97661ac154629a1eff 245 Gene3D G3DSA:1.10.10.60 191 245 1.5E-18 T 14-10-2018 JV59_36380 b57d83c5ed6aea97661ac154629a1eff 245 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 226 242 3.4E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_36380 b57d83c5ed6aea97661ac154629a1eff 245 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 211 226 3.4E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_36380 b57d83c5ed6aea97661ac154629a1eff 245 SUPERFAMILY SSF46689 195 243 1.88E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_36380 b57d83c5ed6aea97661ac154629a1eff 245 SMART SM00342 158 242 1.3E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_36380 b57d83c5ed6aea97661ac154629a1eff 245 SUPERFAMILY SSF46689 145 191 1.25E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_36380 b57d83c5ed6aea97661ac154629a1eff 245 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 195 238 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JV59_36380 b57d83c5ed6aea97661ac154629a1eff 245 Gene3D G3DSA:1.10.10.60 141 190 3.1E-12 T 14-10-2018 JV59_29660 58593c03942b346362e10dc89a6d6fe1 419 SUPERFAMILY SSF53383 8 409 6.38E-97 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_29660 58593c03942b346362e10dc89a6d6fe1 419 Gene3D G3DSA:3.40.640.10 1 259 1.5E-90 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_29660 58593c03942b346362e10dc89a6d6fe1 419 PIRSF PIRSF000390 4 412 6.4E-104 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase JV59_29660 58593c03942b346362e10dc89a6d6fe1 419 Gene3D G3DSA:3.90.1150.10 261 415 4.6E-18 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_29660 58593c03942b346362e10dc89a6d6fe1 419 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 20 404 1.4E-98 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase JV59_16115 959d6fb1cd33d04d3ca379c86b8bd144 294 SUPERFAMILY SSF103481 193 287 1.01E-11 T 14-10-2018 JV59_16115 959d6fb1cd33d04d3ca379c86b8bd144 294 SUPERFAMILY SSF103481 38 138 1.83E-8 T 14-10-2018 JV59_16115 959d6fb1cd33d04d3ca379c86b8bd144 294 Pfam PF00892 EamA-like transporter family 153 281 4.3E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_16115 959d6fb1cd33d04d3ca379c86b8bd144 294 Pfam PF00892 EamA-like transporter family 5 135 2.4E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_29700 ce37c69a8539d766814f843b2dc304ba 1053 Pfam PF00873 AcrB/AcrD/AcrF family 11 1026 5.6E-147 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29700 ce37c69a8539d766814f843b2dc304ba 1053 PRINTS PR00702 Acriflavin resistance protein family signature 18 42 4.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29700 ce37c69a8539d766814f843b2dc304ba 1053 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 4.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29700 ce37c69a8539d766814f843b2dc304ba 1053 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 4.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29700 ce37c69a8539d766814f843b2dc304ba 1053 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 4.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29700 ce37c69a8539d766814f843b2dc304ba 1053 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 4.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29700 ce37c69a8539d766814f843b2dc304ba 1053 PRINTS PR00702 Acriflavin resistance protein family signature 46 64 4.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29700 ce37c69a8539d766814f843b2dc304ba 1053 SUPERFAMILY SSF82866 808 1028 3.4E-44 T 14-10-2018 JV59_29700 ce37c69a8539d766814f843b2dc304ba 1053 Gene3D G3DSA:1.20.1640.10 516 1027 6.6E-241 T 14-10-2018 JV59_29700 ce37c69a8539d766814f843b2dc304ba 1053 SUPERFAMILY SSF82714 186 270 4.58E-14 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_29700 ce37c69a8539d766814f843b2dc304ba 1053 Gene3D G3DSA:3.30.70.1440 676 866 6.6E-241 T 14-10-2018 JV59_29700 ce37c69a8539d766814f843b2dc304ba 1053 Gene3D G3DSA:3.30.70.1430 48 817 6.6E-241 T 14-10-2018 JV59_29700 ce37c69a8539d766814f843b2dc304ba 1053 SUPERFAMILY SSF82693 49 139 2.35E-15 T 14-10-2018 JV59_29700 ce37c69a8539d766814f843b2dc304ba 1053 Gene3D G3DSA:1.20.1640.10 18 515 6.6E-241 T 14-10-2018 JV59_29700 ce37c69a8539d766814f843b2dc304ba 1053 Gene3D G3DSA:3.30.70.1320 141 331 6.6E-241 T 14-10-2018 JV59_29700 ce37c69a8539d766814f843b2dc304ba 1053 Gene3D G3DSA:3.30.70.1430 573 675 6.6E-241 T 14-10-2018 JV59_29700 ce37c69a8539d766814f843b2dc304ba 1053 SUPERFAMILY SSF82866 300 496 8.37E-35 T 14-10-2018 JV59_29700 ce37c69a8539d766814f843b2dc304ba 1053 Gene3D G3DSA:3.30.2090.10 183 276 6.6E-241 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_29700 ce37c69a8539d766814f843b2dc304ba 1053 SUPERFAMILY SSF82714 730 805 5.49E-10 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_29700 ce37c69a8539d766814f843b2dc304ba 1053 Gene3D G3DSA:3.30.2090.10 722 809 6.6E-241 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_23760 9329bd467538b212d5ecf7a17bc226b1 88 Pfam PF11747 Killing trait 7 73 3.8E-22 T 14-10-2018 IPR021070 Killing trait, RebB JV59_29025 fd0d575cf958ab9d6d7fe791437a978e 129 Pfam PF04024 PspC domain 4 62 3.8E-16 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal JV59_29025 fd0d575cf958ab9d6d7fe791437a978e 129 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 3 129 4.4E-47 T 14-10-2018 IPR014320 Phage shock protein, PspC JV59_21830 99e577dc6243ae591b00e0a6d30a9225 469 PRINTS PR00811 Bacterial general secretion pathway protein D signature 249 273 2.6E-13 T 14-10-2018 IPR001775 GspD/PilQ family JV59_21830 99e577dc6243ae591b00e0a6d30a9225 469 PRINTS PR00811 Bacterial general secretion pathway protein D signature 192 202 2.6E-13 T 14-10-2018 IPR001775 GspD/PilQ family JV59_21830 99e577dc6243ae591b00e0a6d30a9225 469 PRINTS PR00811 Bacterial general secretion pathway protein D signature 377 395 2.6E-13 T 14-10-2018 IPR001775 GspD/PilQ family JV59_21830 99e577dc6243ae591b00e0a6d30a9225 469 PRINTS PR00811 Bacterial general secretion pathway protein D signature 286 296 2.6E-13 T 14-10-2018 IPR001775 GspD/PilQ family JV59_21830 99e577dc6243ae591b00e0a6d30a9225 469 Pfam PF00263 Bacterial type II and III secretion system protein 253 412 3.3E-42 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 JV59_21830 99e577dc6243ae591b00e0a6d30a9225 469 Pfam PF13629 Pilus formation protein N terminal region 25 93 1.3E-15 T 14-10-2018 IPR032789 Pilus formation protein, N-terminal JV59_24990 bad29c001b6be152ec351eadec976fb1 202 Pfam PF08534 Redoxin 51 195 2.3E-15 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 JV59_24990 bad29c001b6be152ec351eadec976fb1 202 Gene3D G3DSA:3.40.30.10 31 200 8.7E-27 T 14-10-2018 JV59_24990 bad29c001b6be152ec351eadec976fb1 202 SUPERFAMILY SSF52833 41 195 4.9E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_30255 00e1756b24e54f468f8a34cac70a9287 414 Gene3D G3DSA:3.30.360.10 159 355 7.9E-145 T 14-10-2018 JV59_30255 00e1756b24e54f468f8a34cac70a9287 414 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 144 8.1E-34 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 JV59_30255 00e1756b24e54f468f8a34cac70a9287 414 SUPERFAMILY SSF51735 3 179 6.13E-17 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_30255 00e1756b24e54f468f8a34cac70a9287 414 Gene3D G3DSA:3.40.50.720 4 398 7.9E-145 T 14-10-2018 JV59_30255 00e1756b24e54f468f8a34cac70a9287 414 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 394 2.5E-29 T 14-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 JV59_21190 caeaa3ad2de63e04e45ea2f75dcfbc44 117 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 6 112 2.0E-26 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like JV59_30855 4c71c192142dd4457c4f340ef24cd6e6 265 Gene3D G3DSA:3.40.190.10 39 263 9.9E-79 T 14-10-2018 JV59_30855 4c71c192142dd4457c4f340ef24cd6e6 265 Gene3D G3DSA:3.40.190.10 116 229 9.9E-79 T 14-10-2018 JV59_30855 4c71c192142dd4457c4f340ef24cd6e6 265 Pfam PF13531 Bacterial extracellular solute-binding protein 38 263 1.4E-26 T 14-10-2018 JV59_30855 4c71c192142dd4457c4f340ef24cd6e6 265 SUPERFAMILY SSF53850 35 263 4.91E-31 T 14-10-2018 JV59_18015 a9cca08025805d9e5c992a8b84c24800 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 7.9E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_18015 a9cca08025805d9e5c992a8b84c24800 234 Gene3D G3DSA:3.40.1410.10 73 230 2.0E-34 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JV59_18015 a9cca08025805d9e5c992a8b84c24800 234 SUPERFAMILY SSF46785 3 75 1.74E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_18015 a9cca08025805d9e5c992a8b84c24800 234 SMART SM00345 6 65 6.1E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_18015 a9cca08025805d9e5c992a8b84c24800 234 Pfam PF07702 UTRA domain 86 224 1.8E-34 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 JV59_18015 a9cca08025805d9e5c992a8b84c24800 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 7.9E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_18015 a9cca08025805d9e5c992a8b84c24800 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 7.9E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_18015 a9cca08025805d9e5c992a8b84c24800 234 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 2 229 8.8E-112 T 14-10-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR JV59_18015 a9cca08025805d9e5c992a8b84c24800 234 SUPERFAMILY SSF64288 53 227 9.58E-40 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JV59_18015 a9cca08025805d9e5c992a8b84c24800 234 SMART SM00866 86 225 8.6E-30 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 JV59_18015 a9cca08025805d9e5c992a8b84c24800 234 Gene3D G3DSA:1.10.10.10 2 69 7.5E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_28095 69b0aa351f5f2a66ac42fad73cecb12f 239 SUPERFAMILY SSF141868 12 238 5.49E-47 T 14-10-2018 IPR035919 EAL domain superfamily JV59_28095 69b0aa351f5f2a66ac42fad73cecb12f 239 Pfam PF00563 EAL domain 12 235 1.7E-38 T 14-10-2018 IPR001633 EAL domain JV59_28095 69b0aa351f5f2a66ac42fad73cecb12f 239 Gene3D G3DSA:3.20.20.450 5 239 6.2E-49 T 14-10-2018 IPR035919 EAL domain superfamily JV59_28095 69b0aa351f5f2a66ac42fad73cecb12f 239 SMART SM00052 4 239 1.9E-11 T 14-10-2018 IPR001633 EAL domain JV59_27190 b9e207c286649ae1563957f4348568d4 304 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 296 2.1E-101 T 14-10-2018 IPR010099 Epimerase family protein SDR39U1 JV59_27190 b9e207c286649ae1563957f4348568d4 304 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 226 1.6E-21 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JV59_27190 b9e207c286649ae1563957f4348568d4 304 SUPERFAMILY SSF51735 1 302 1.19E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_27190 b9e207c286649ae1563957f4348568d4 304 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 1.9E-16 T 14-10-2018 IPR013549 Domain of unknown function DUF1731 JV59_27190 b9e207c286649ae1563957f4348568d4 304 Gene3D G3DSA:3.40.50.720 2 303 2.9E-77 T 14-10-2018 JV59_27505 41dc7d717fbc451c1429991c2ac09b9c 283 SUPERFAMILY SSF51569 2 278 3.11E-104 T 14-10-2018 JV59_27505 41dc7d717fbc451c1429991c2ac09b9c 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 9.8E-117 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 JV59_27505 41dc7d717fbc451c1429991c2ac09b9c 283 Gene3D G3DSA:3.20.20.70 1 283 5.8E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_27505 41dc7d717fbc451c1429991c2ac09b9c 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 48.579 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 JV59_27505 41dc7d717fbc451c1429991c2ac09b9c 283 Pfam PF00793 DAHP synthetase I family 10 274 4.1E-69 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 JV59_37950 b753819b347f61bf0a8e10502cf0d662 188 SUPERFAMILY SSF54534 2 139 3.34E-35 T 14-10-2018 JV59_37950 b753819b347f61bf0a8e10502cf0d662 188 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 136 7.3E-14 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain JV59_37950 b753819b347f61bf0a8e10502cf0d662 188 Gene3D G3DSA:2.40.10.330 71 121 2.5E-59 T 14-10-2018 JV59_37950 b753819b347f61bf0a8e10502cf0d662 188 Gene3D G3DSA:3.10.50.40 3 154 2.5E-59 T 14-10-2018 JV59_20170 8d72309390dc33099730f7330fbeb9cf 303 Gene3D G3DSA:3.30.450.20 14 141 2.5E-15 T 14-10-2018 JV59_20170 8d72309390dc33099730f7330fbeb9cf 303 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 140 1.1E-6 T 14-10-2018 IPR000014 PAS domain JV59_20170 8d72309390dc33099730f7330fbeb9cf 303 SMART SM00267 133 303 1.6E-51 T 14-10-2018 IPR000160 GGDEF domain JV59_20170 8d72309390dc33099730f7330fbeb9cf 303 SUPERFAMILY SSF55073 149 300 1.02E-45 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_20170 8d72309390dc33099730f7330fbeb9cf 303 SMART SM00091 17 83 0.0077 T 14-10-2018 IPR000014 PAS domain JV59_20170 8d72309390dc33099730f7330fbeb9cf 303 Gene3D G3DSA:3.30.70.270 142 302 1.6E-52 T 14-10-2018 JV59_20170 8d72309390dc33099730f7330fbeb9cf 303 Pfam PF00990 Diguanylate cyclase, GGDEF domain 144 299 7.9E-43 T 14-10-2018 IPR000160 GGDEF domain JV59_20170 8d72309390dc33099730f7330fbeb9cf 303 SUPERFAMILY SSF55785 23 134 2.27E-16 T 14-10-2018 IPR035965 PAS domain superfamily JV59_20170 8d72309390dc33099730f7330fbeb9cf 303 Pfam PF08448 PAS fold 24 132 4.5E-13 T 14-10-2018 IPR013656 PAS fold-4 JV59_20170 8d72309390dc33099730f7330fbeb9cf 303 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 141 301 3.0E-49 T 14-10-2018 IPR000160 GGDEF domain JV59_18690 5384e73a34861efbec08e505e71bf841 323 Pfam PF01590 GAF domain 23 143 3.0E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 JV59_18690 5384e73a34861efbec08e505e71bf841 323 SUPERFAMILY SSF55073 173 320 2.59E-34 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_18690 5384e73a34861efbec08e505e71bf841 323 Gene3D G3DSA:3.30.70.270 163 323 1.7E-41 T 14-10-2018 JV59_18690 5384e73a34861efbec08e505e71bf841 323 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 166 320 9.1E-37 T 14-10-2018 IPR000160 GGDEF domain JV59_18690 5384e73a34861efbec08e505e71bf841 323 Gene3D G3DSA:3.30.450.40 19 162 2.6E-11 T 14-10-2018 IPR029016 GAF-like domain superfamily JV59_18690 5384e73a34861efbec08e505e71bf841 323 SMART SM00267 157 323 3.0E-30 T 14-10-2018 IPR000160 GGDEF domain JV59_18690 5384e73a34861efbec08e505e71bf841 323 SUPERFAMILY SSF55781 20 151 4.8E-17 T 14-10-2018 JV59_18690 5384e73a34861efbec08e505e71bf841 323 Pfam PF00990 Diguanylate cyclase, GGDEF domain 169 318 7.8E-36 T 14-10-2018 IPR000160 GGDEF domain JV59_37280 a00ec11d7e974f51ad0126c7ad6c1404 854 Pfam PF05188 MutS domain II 128 253 5.3E-31 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 JV59_37280 a00ec11d7e974f51ad0126c7ad6c1404 854 Pfam PF05192 MutS domain III 269 558 4.3E-43 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 JV59_37280 a00ec11d7e974f51ad0126c7ad6c1404 854 Gene3D G3DSA:3.40.1170.10 1 121 2.7E-52 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 JV59_37280 a00ec11d7e974f51ad0126c7ad6c1404 854 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 846 25.392 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 JV59_37280 a00ec11d7e974f51ad0126c7ad6c1404 854 SUPERFAMILY SSF48334 267 564 5.36E-93 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily JV59_37280 a00ec11d7e974f51ad0126c7ad6c1404 854 SUPERFAMILY SSF53150 114 266 1.15E-40 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 JV59_37280 a00ec11d7e974f51ad0126c7ad6c1404 854 Pfam PF00488 MutS domain V 609 796 8.9E-87 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 JV59_37280 a00ec11d7e974f51ad0126c7ad6c1404 854 Gene3D G3DSA:3.30.420.110 127 261 7.6E-36 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 JV59_37280 a00ec11d7e974f51ad0126c7ad6c1404 854 Pfam PF05190 MutS family domain IV 427 517 1.8E-30 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 JV59_37280 a00ec11d7e974f51ad0126c7ad6c1404 854 Pfam PF01624 MutS domain I 8 119 1.8E-41 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 JV59_37280 a00ec11d7e974f51ad0126c7ad6c1404 854 SUPERFAMILY SSF55271 4 113 1.57E-42 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 JV59_37280 a00ec11d7e974f51ad0126c7ad6c1404 854 SMART SM00533 283 590 7.5E-111 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 JV59_37280 a00ec11d7e974f51ad0126c7ad6c1404 854 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 JV59_37280 a00ec11d7e974f51ad0126c7ad6c1404 854 SMART SM00534 606 793 1.9E-118 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 JV59_37280 a00ec11d7e974f51ad0126c7ad6c1404 854 SUPERFAMILY SSF52540 566 797 4.26E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_37280 a00ec11d7e974f51ad0126c7ad6c1404 854 Gene3D G3DSA:1.10.1420.10 266 558 3.9E-105 T 14-10-2018 JV59_37280 a00ec11d7e974f51ad0126c7ad6c1404 854 Gene3D G3DSA:1.10.1420.10 386 502 3.9E-105 T 14-10-2018 JV59_37280 a00ec11d7e974f51ad0126c7ad6c1404 854 PIRSF PIRSF037677 1 829 3.4E-161 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 JV59_37280 a00ec11d7e974f51ad0126c7ad6c1404 854 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 852 0.0 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 JV59_37280 a00ec11d7e974f51ad0126c7ad6c1404 854 Gene3D G3DSA:3.40.50.300 568 849 2.2E-101 T 14-10-2018 JV59_27710 bbb5389bed5290290a6baa32375f2758 298 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 186 3.7E-55 T 14-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 JV59_27710 bbb5389bed5290290a6baa32375f2758 298 SUPERFAMILY SSF64518 1 296 7.45E-53 T 14-10-2018 JV59_27710 bbb5389bed5290290a6baa32375f2758 298 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 141 9.5E-16 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JV59_40010 f60957b654b67c54476319be23e107a6 824 Pfam PF08495 FIST N domain 30 215 4.6E-19 T 14-10-2018 IPR013702 FIST domain, N-terminal JV59_40010 f60957b654b67c54476319be23e107a6 824 Gene3D G3DSA:3.30.70.270 395 572 1.4E-13 T 14-10-2018 JV59_40010 f60957b654b67c54476319be23e107a6 824 SMART SM00267 399 574 0.0022 T 14-10-2018 IPR000160 GGDEF domain JV59_40010 f60957b654b67c54476319be23e107a6 824 Gene3D G3DSA:3.20.20.450 586 823 4.1E-61 T 14-10-2018 IPR035919 EAL domain superfamily JV59_40010 f60957b654b67c54476319be23e107a6 824 SUPERFAMILY SSF55073 416 569 7.53E-7 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_40010 f60957b654b67c54476319be23e107a6 824 SUPERFAMILY SSF141868 594 821 7.06E-58 T 14-10-2018 IPR035919 EAL domain superfamily JV59_40010 f60957b654b67c54476319be23e107a6 824 Pfam PF00990 Diguanylate cyclase, GGDEF domain 412 467 4.7E-6 T 14-10-2018 IPR000160 GGDEF domain JV59_40010 f60957b654b67c54476319be23e107a6 824 Pfam PF00563 EAL domain 594 820 5.0E-56 T 14-10-2018 IPR001633 EAL domain JV59_40010 f60957b654b67c54476319be23e107a6 824 SMART SM00897 27 216 3.3E-24 T 14-10-2018 IPR013702 FIST domain, N-terminal JV59_40010 f60957b654b67c54476319be23e107a6 824 SMART SM01204 217 341 3.9E-11 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 JV59_40010 f60957b654b67c54476319be23e107a6 824 SMART SM00052 587 824 4.2E-43 T 14-10-2018 IPR001633 EAL domain JV59_40010 f60957b654b67c54476319be23e107a6 824 Pfam PF10442 FIST C domain 217 339 3.6E-7 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 JV59_28665 eb16a1ee4081d212485462ab337a9beb 344 Gene3D G3DSA:1.10.287.70 2 105 3.8E-13 T 14-10-2018 JV59_28665 eb16a1ee4081d212485462ab337a9beb 344 Gene3D G3DSA:3.40.50.720 112 234 7.4E-11 T 14-10-2018 JV59_28665 eb16a1ee4081d212485462ab337a9beb 344 SUPERFAMILY SSF51735 121 241 4.33E-11 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_28665 eb16a1ee4081d212485462ab337a9beb 344 SUPERFAMILY SSF81324 3 142 4.71E-17 T 14-10-2018 JV59_28665 eb16a1ee4081d212485462ab337a9beb 344 Pfam PF07885 Ion channel 26 101 2.4E-13 T 14-10-2018 IPR013099 Potassium channel domain JV59_11835 9091a84c6778b75a598c1eb8c270e041 260 SUPERFAMILY SSF52540 37 225 2.45E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_11835 9091a84c6778b75a598c1eb8c270e041 260 Gene3D G3DSA:3.40.50.300 1 242 8.0E-100 T 14-10-2018 JV59_11835 9091a84c6778b75a598c1eb8c270e041 260 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 5 230 2.1E-113 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related JV59_11835 9091a84c6778b75a598c1eb8c270e041 260 PIRSF PIRSF028756 1 260 2.0E-133 T 14-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 JV59_11835 9091a84c6778b75a598c1eb8c270e041 260 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 5 231 4.7E-115 T 14-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 JV59_16235 722161058b279360eb7d97a60658c251 314 Pfam PF03466 LysR substrate binding domain 98 301 1.5E-19 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_16235 722161058b279360eb7d97a60658c251 314 SUPERFAMILY SSF53850 94 301 8.53E-28 T 14-10-2018 JV59_16235 722161058b279360eb7d97a60658c251 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 8.3E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_16235 722161058b279360eb7d97a60658c251 314 Gene3D G3DSA:1.10.10.10 3 90 1.4E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_16235 722161058b279360eb7d97a60658c251 314 Gene3D G3DSA:3.40.190.10 100 296 3.0E-38 T 14-10-2018 JV59_16235 722161058b279360eb7d97a60658c251 314 SUPERFAMILY SSF46785 7 85 3.33E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_16235 722161058b279360eb7d97a60658c251 314 Gene3D G3DSA:3.40.190.10 175 273 3.0E-38 T 14-10-2018 JV59_16235 722161058b279360eb7d97a60658c251 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 2.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_16235 722161058b279360eb7d97a60658c251 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 2.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_16235 722161058b279360eb7d97a60658c251 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 2.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_34450 db054fbf518e53b2ea7d71a2c497128d 141 SUPERFAMILY SSF103515 50 141 6.67E-5 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily JV59_18230 12964a00a01861cca72cd9bf7730cd56 416 SUPERFAMILY SSF46785 61 127 1.48E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_17970 fd226644f898f10c18381aa804441397 106 SUPERFAMILY SSF54909 4 67 7.69E-8 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_01090 a1137fe3b639b2d61061831d21674af8 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 57 9.8E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_01090 a1137fe3b639b2d61061831d21674af8 298 SUPERFAMILY SSF53850 95 294 6.52E-23 T 14-10-2018 JV59_01090 a1137fe3b639b2d61061831d21674af8 298 Pfam PF03466 LysR substrate binding domain 96 272 1.2E-16 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_01090 a1137fe3b639b2d61061831d21674af8 298 Gene3D G3DSA:1.10.10.10 2 85 3.2E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_01090 a1137fe3b639b2d61061831d21674af8 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_01090 a1137fe3b639b2d61061831d21674af8 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_01090 a1137fe3b639b2d61061831d21674af8 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_01090 a1137fe3b639b2d61061831d21674af8 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 295 4.1E-103 T 14-10-2018 IPR017685 HTH-type transcriptional regulator ArgP JV59_01090 a1137fe3b639b2d61061831d21674af8 298 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 298 51.809 T 14-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria JV59_01090 a1137fe3b639b2d61061831d21674af8 298 SUPERFAMILY SSF46785 4 110 4.79E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_01090 a1137fe3b639b2d61061831d21674af8 298 Gene3D G3DSA:3.40.190.290 89 296 5.6E-62 T 14-10-2018 JV59_17530 fde28b3f192f3448595528498b90e91c 439 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 436 4.8E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_17530 fde28b3f192f3448595528498b90e91c 439 SUPERFAMILY SSF55874 303 437 1.57E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_17530 fde28b3f192f3448595528498b90e91c 439 SMART SM00304 169 222 7.0E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_17530 fde28b3f192f3448595528498b90e91c 439 Gene3D G3DSA:1.10.287.130 174 285 1.2E-17 T 14-10-2018 JV59_17530 fde28b3f192f3448595528498b90e91c 439 Gene3D G3DSA:3.30.565.10 294 439 4.9E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_17530 fde28b3f192f3448595528498b90e91c 439 SMART SM00388 223 287 2.3E-4 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_17530 fde28b3f192f3448595528498b90e91c 439 SMART SM00387 333 439 7.2E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_17530 fde28b3f192f3448595528498b90e91c 439 SUPERFAMILY SSF47384 206 284 8.24E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_17530 fde28b3f192f3448595528498b90e91c 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 7.3E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_17530 fde28b3f192f3448595528498b90e91c 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 7.3E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_17530 fde28b3f192f3448595528498b90e91c 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 7.3E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_28440 d074cdeebc817450eb4eae77a80426b5 329 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 9 321 9.7E-170 T 14-10-2018 IPR011758 Alpha-L-glutamate ligase-related protein JV59_28440 d074cdeebc817450eb4eae77a80426b5 329 Pfam PF14397 Sugar-transfer associated ATP-grasp 25 299 4.7E-114 T 14-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 JV59_28440 d074cdeebc817450eb4eae77a80426b5 329 SUPERFAMILY SSF56059 47 284 1.5E-19 T 14-10-2018 JV59_27485 2f2ed85e1bc445aa54f7d88206fab515 205 Gene3D G3DSA:2.50.20.10 25 203 2.2E-54 T 14-10-2018 JV59_27485 2f2ed85e1bc445aa54f7d88206fab515 205 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 4 203 27.499 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 JV59_27485 2f2ed85e1bc445aa54f7d88206fab515 205 Pfam PF03550 Outer membrane lipoprotein LolB 45 201 1.1E-43 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 JV59_27485 2f2ed85e1bc445aa54f7d88206fab515 205 SUPERFAMILY SSF89392 20 202 1.22E-48 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX JV59_27485 2f2ed85e1bc445aa54f7d88206fab515 205 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 8 202 1.4E-46 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 JV59_00870 a6caebb4ad8e40fe348f708df28331b1 218 SUPERFAMILY SSF47413 17 67 1.29E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_00870 a6caebb4ad8e40fe348f708df28331b1 218 SUPERFAMILY SSF51306 84 216 8.89E-22 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily JV59_00870 a6caebb4ad8e40fe348f708df28331b1 218 Gene3D G3DSA:2.10.109.10 103 218 4.2E-12 T 14-10-2018 JV59_00870 a6caebb4ad8e40fe348f708df28331b1 218 SMART SM00530 10 63 7.7E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_00870 a6caebb4ad8e40fe348f708df28331b1 218 Pfam PF00717 Peptidase S24-like 131 195 7.0E-10 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C JV59_00870 a6caebb4ad8e40fe348f708df28331b1 218 Pfam PF01381 Helix-turn-helix 18 63 4.7E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_00870 a6caebb4ad8e40fe348f708df28331b1 218 ProSitePatterns PS00501 Signal peptidases I serine active site. 133 140 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 JV59_00870 a6caebb4ad8e40fe348f708df28331b1 218 Gene3D G3DSA:1.10.260.40 6 78 4.2E-11 T 14-10-2018 JV59_28045 9f4f990675abddd49cfbb8a630ba4111 177 Pfam PF01161 Phosphatidylethanolamine-binding protein 41 175 3.9E-34 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein JV59_28045 9f4f990675abddd49cfbb8a630ba4111 177 SUPERFAMILY SSF49777 22 177 6.54E-47 T 14-10-2018 IPR036610 PEBP-like superfamily JV59_28045 9f4f990675abddd49cfbb8a630ba4111 177 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 42 175 1.6E-35 T 14-10-2018 IPR005247 YbhB/YbcL JV59_28045 9f4f990675abddd49cfbb8a630ba4111 177 Gene3D G3DSA:3.90.280.10 15 177 2.5E-49 T 14-10-2018 IPR036610 PEBP-like superfamily JV59_19420 a6ce508abe12194e494ffb25d0de1af6 221 Gene3D G3DSA:2.30.110.10 4 113 8.3E-14 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JV59_19420 a6ce508abe12194e494ffb25d0de1af6 221 SUPERFAMILY SSF141371 9 116 1.77E-25 T 14-10-2018 JV59_19420 a6ce508abe12194e494ffb25d0de1af6 221 Gene3D G3DSA:2.40.10.220 114 219 4.0E-8 T 14-10-2018 JV59_19420 a6ce508abe12194e494ffb25d0de1af6 221 SUPERFAMILY SSF141371 117 215 3.14E-14 T 14-10-2018 JV59_19420 a6ce508abe12194e494ffb25d0de1af6 221 Pfam PF12945 Flagellar protein YcgR 17 106 4.2E-10 T 14-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal JV59_19420 a6ce508abe12194e494ffb25d0de1af6 221 Pfam PF07238 PilZ domain 115 206 8.3E-13 T 14-10-2018 IPR009875 PilZ domain GO:0035438 JV59_36440 1f499e06443c9808cf1b6f10bcdb8a45 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 1.1E-38 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 JV59_36440 1f499e06443c9808cf1b6f10bcdb8a45 107 TIGRFAM TIGR01997 sufA_proteo: FeS assembly scaffold SufA 2 107 9.4E-42 T 14-10-2018 IPR011298 FeS assembly scaffold SufA GO:0097428 JV59_36440 1f499e06443c9808cf1b6f10bcdb8a45 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 4.3E-26 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 JV59_36440 1f499e06443c9808cf1b6f10bcdb8a45 107 SUPERFAMILY SSF89360 1 96 3.14E-34 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 JV59_36440 1f499e06443c9808cf1b6f10bcdb8a45 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 1.2E-57 T 14-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 JV59_36440 1f499e06443c9808cf1b6f10bcdb8a45 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 JV59_36440 1f499e06443c9808cf1b6f10bcdb8a45 107 Gene3D G3DSA:2.60.300.12 2 107 7.8E-40 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 JV59_16195 b32203fc8137167c67f082c9448c8f0d 489 Gene3D G3DSA:1.10.10.10 7 118 2.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_16195 b32203fc8137167c67f082c9448c8f0d 489 SUPERFAMILY SSF46894 5 104 9.35E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_16195 b32203fc8137167c67f082c9448c8f0d 489 SMART SM00862 26 102 2.0E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_16195 b32203fc8137167c67f082c9448c8f0d 489 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 102 2.3E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_18020 f6834d8fb8f96827a47a200791b10e19 300 Pfam PF00892 EamA-like transporter family 4 136 1.1E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_18020 f6834d8fb8f96827a47a200791b10e19 300 Pfam PF00892 EamA-like transporter family 153 299 3.5E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_18020 f6834d8fb8f96827a47a200791b10e19 300 SUPERFAMILY SSF103481 208 299 7.19E-8 T 14-10-2018 JV59_18020 f6834d8fb8f96827a47a200791b10e19 300 SUPERFAMILY SSF103481 41 141 3.01E-6 T 14-10-2018 JV59_18020 f6834d8fb8f96827a47a200791b10e19 300 TIGRFAM TIGR03340 phn_DUF6: phosphonate utilization associated putative membrane protein 5 297 6.4E-90 T 14-10-2018 IPR017725 Phosphonate utilization associated transmembrane protein, putative JV59_18265 b580bf16e9d1eb2b50ba58910b679c4f 280 Pfam PF03466 LysR substrate binding domain 76 279 2.3E-31 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_18265 b580bf16e9d1eb2b50ba58910b679c4f 280 Gene3D G3DSA:1.10.10.10 1 74 9.0E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_18265 b580bf16e9d1eb2b50ba58910b679c4f 280 Gene3D G3DSA:3.40.190.10 80 274 9.5E-26 T 14-10-2018 JV59_18265 b580bf16e9d1eb2b50ba58910b679c4f 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 5.4E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_18265 b580bf16e9d1eb2b50ba58910b679c4f 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 7 18 5.4E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_18265 b580bf16e9d1eb2b50ba58910b679c4f 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 28 5.4E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_18265 b580bf16e9d1eb2b50ba58910b679c4f 280 Gene3D G3DSA:3.40.190.10 153 252 9.5E-26 T 14-10-2018 JV59_18265 b580bf16e9d1eb2b50ba58910b679c4f 280 SUPERFAMILY SSF53850 76 279 8.69E-30 T 14-10-2018 JV59_18265 b580bf16e9d1eb2b50ba58910b679c4f 280 SUPERFAMILY SSF46785 1 75 4.4E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_18265 b580bf16e9d1eb2b50ba58910b679c4f 280 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 51 3.9E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_18620 d03a53a43fea3344b362cd6c02491b37 386 Gene3D G3DSA:1.20.1250.20 6 381 1.6E-35 T 14-10-2018 JV59_18620 d03a53a43fea3344b362cd6c02491b37 386 Pfam PF07690 Major Facilitator Superfamily 18 343 1.1E-27 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_18620 d03a53a43fea3344b362cd6c02491b37 386 SUPERFAMILY SSF103473 17 380 1.7E-40 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_18980 3b0caaa68341a5d300f6443b114fe4e3 378 Gene3D G3DSA:3.40.930.10 144 275 4.1E-6 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 JV59_18980 3b0caaa68341a5d300f6443b114fe4e3 378 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain JV59_18980 3b0caaa68341a5d300f6443b114fe4e3 378 Pfam PF00381 PTS HPr component phosphorylation site 292 372 2.9E-25 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like JV59_18980 3b0caaa68341a5d300f6443b114fe4e3 378 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 300 307 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site JV59_18980 3b0caaa68341a5d300f6443b114fe4e3 378 Gene3D G3DSA:3.30.1340.10 289 375 5.5E-27 T 14-10-2018 IPR035895 HPr-like superfamily JV59_18980 3b0caaa68341a5d300f6443b114fe4e3 378 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 329 344 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site JV59_18980 3b0caaa68341a5d300f6443b114fe4e3 378 PRINTS PR00107 Phosphocarrier protein signature 343 360 8.2E-19 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like JV59_18980 3b0caaa68341a5d300f6443b114fe4e3 378 PRINTS PR00107 Phosphocarrier protein signature 300 316 8.2E-19 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like JV59_18980 3b0caaa68341a5d300f6443b114fe4e3 378 PRINTS PR00107 Phosphocarrier protein signature 328 343 8.2E-19 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like JV59_18980 3b0caaa68341a5d300f6443b114fe4e3 378 SUPERFAMILY SSF55804 4 141 6.41E-38 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 JV59_18980 3b0caaa68341a5d300f6443b114fe4e3 378 Gene3D G3DSA:3.40.930.10 1 142 2.6E-41 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 JV59_18980 3b0caaa68341a5d300f6443b114fe4e3 378 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 140 2.5E-31 T 14-10-2018 IPR002178 PTS EIIA type-2 domain JV59_18980 3b0caaa68341a5d300f6443b114fe4e3 378 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 149 254 1.0E-4 T 14-10-2018 IPR002178 PTS EIIA type-2 domain JV59_18980 3b0caaa68341a5d300f6443b114fe4e3 378 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 290 371 1.4E-22 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like JV59_18980 3b0caaa68341a5d300f6443b114fe4e3 378 SUPERFAMILY SSF55594 292 377 2.22E-23 T 14-10-2018 IPR035895 HPr-like superfamily JV59_18980 3b0caaa68341a5d300f6443b114fe4e3 378 SUPERFAMILY SSF55804 149 275 5.62E-17 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 JV59_22435 85c365d20fe44a78256d999e2c92566f 817 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 11 812 0.0 T 14-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 JV59_22435 85c365d20fe44a78256d999e2c92566f 817 Pfam PF00343 Carbohydrate phosphorylase 99 812 0.0 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 JV59_22435 85c365d20fe44a78256d999e2c92566f 817 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 656 668 - T 14-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 JV59_22435 85c365d20fe44a78256d999e2c92566f 817 PIRSF PIRSF000460 1 817 5.9E-214 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 JV59_22435 85c365d20fe44a78256d999e2c92566f 817 SUPERFAMILY SSF53756 7 815 0.0 T 14-10-2018 JV59_22435 85c365d20fe44a78256d999e2c92566f 817 Gene3D G3DSA:3.40.50.2000 5 474 6.4E-193 T 14-10-2018 JV59_22435 85c365d20fe44a78256d999e2c92566f 817 Gene3D G3DSA:3.40.50.2000 475 797 3.1E-144 T 14-10-2018 JV59_22370 0627a5c9205344201975372394d26773 156 Gene3D G3DSA:3.40.630.30 3 149 3.9E-22 T 14-10-2018 JV59_22370 0627a5c9205344201975372394d26773 156 SUPERFAMILY SSF55729 6 142 9.21E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_22370 0627a5c9205344201975372394d26773 156 Pfam PF00583 Acetyltransferase (GNAT) family 39 133 2.2E-12 T 14-10-2018 IPR000182 GNAT domain JV59_34400 91dc9ef4bc4cce5abbca649feb27f38c 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 1.2E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_34400 91dc9ef4bc4cce5abbca649feb27f38c 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 1.2E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_34400 91dc9ef4bc4cce5abbca649feb27f38c 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 1.2E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_34400 91dc9ef4bc4cce5abbca649feb27f38c 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 1.2E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_34400 91dc9ef4bc4cce5abbca649feb27f38c 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.2E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_34400 91dc9ef4bc4cce5abbca649feb27f38c 247 SUPERFAMILY SSF51735 9 242 1.83E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_34400 91dc9ef4bc4cce5abbca649feb27f38c 247 Pfam PF00106 short chain dehydrogenase 13 208 1.5E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_34400 91dc9ef4bc4cce5abbca649feb27f38c 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JV59_34400 91dc9ef4bc4cce5abbca649feb27f38c 247 Gene3D G3DSA:3.40.50.720 1 246 2.6E-67 T 14-10-2018 JV59_16170 c791c231c994272e6889b088e5b4f274 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 3.0E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_16170 c791c231c994272e6889b088e5b4f274 186 SUPERFAMILY SSF48498 82 159 8.56E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JV59_16170 c791c231c994272e6889b088e5b4f274 186 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 77 158 2.3E-6 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 JV59_16170 c791c231c994272e6889b088e5b4f274 186 SUPERFAMILY SSF46689 19 75 8.21E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_16170 c791c231c994272e6889b088e5b4f274 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 8.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_16170 c791c231c994272e6889b088e5b4f274 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 8.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_16170 c791c231c994272e6889b088e5b4f274 186 Gene3D G3DSA:1.10.357.10 5 180 1.0E-26 T 14-10-2018 JV59_01065 52bf1b2d47bd1a55a1aa36a1e1361da5 386 Gene3D G3DSA:3.40.50.1260 10 379 1.5E-149 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_01065 52bf1b2d47bd1a55a1aa36a1e1361da5 386 Pfam PF00162 Phosphoglycerate kinase 6 373 5.8E-138 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_01065 52bf1b2d47bd1a55a1aa36a1e1361da5 386 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 3.2E-83 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_01065 52bf1b2d47bd1a55a1aa36a1e1361da5 386 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 3.2E-83 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_01065 52bf1b2d47bd1a55a1aa36a1e1361da5 386 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 3.2E-83 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_01065 52bf1b2d47bd1a55a1aa36a1e1361da5 386 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 3.2E-83 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_01065 52bf1b2d47bd1a55a1aa36a1e1361da5 386 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 3.2E-83 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_01065 52bf1b2d47bd1a55a1aa36a1e1361da5 386 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 3.2E-83 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_01065 52bf1b2d47bd1a55a1aa36a1e1361da5 386 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 3.2E-83 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_01065 52bf1b2d47bd1a55a1aa36a1e1361da5 386 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 3.2E-83 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_01065 52bf1b2d47bd1a55a1aa36a1e1361da5 386 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 3.2E-83 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_01065 52bf1b2d47bd1a55a1aa36a1e1361da5 386 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.257 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_01065 52bf1b2d47bd1a55a1aa36a1e1361da5 386 SUPERFAMILY SSF53748 3 383 1.88E-143 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_01065 52bf1b2d47bd1a55a1aa36a1e1361da5 386 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_01065 52bf1b2d47bd1a55a1aa36a1e1361da5 386 PIRSF PIRSF000724 1 386 4.8E-133 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_01065 52bf1b2d47bd1a55a1aa36a1e1361da5 386 Gene3D G3DSA:3.40.50.1260 165 373 1.5E-149 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_37200 fad41c77d7a1e34700413677d74edca0 316 Gene3D G3DSA:3.40.50.720 133 263 5.0E-93 T 14-10-2018 JV59_37200 fad41c77d7a1e34700413677d74edca0 316 SMART SM00829 12 312 2.1E-12 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JV59_37200 fad41c77d7a1e34700413677d74edca0 316 Pfam PF13602 Zinc-binding dehydrogenase 191 312 2.6E-19 T 14-10-2018 JV59_37200 fad41c77d7a1e34700413677d74edca0 316 SUPERFAMILY SSF50129 4 154 7.91E-35 T 14-10-2018 IPR011032 GroES-like superfamily JV59_37200 fad41c77d7a1e34700413677d74edca0 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 92 1.2E-7 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JV59_37200 fad41c77d7a1e34700413677d74edca0 316 Gene3D G3DSA:3.90.180.10 10 310 5.0E-93 T 14-10-2018 JV59_37200 fad41c77d7a1e34700413677d74edca0 316 SUPERFAMILY SSF51735 122 244 2.55E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_34900 b2a30964ef9f0efc1f843e340675cc1e 406 SUPERFAMILY SSF48452 162 267 8.85E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_34900 b2a30964ef9f0efc1f843e340675cc1e 406 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 116 1.8E-29 T 14-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI JV59_34900 b2a30964ef9f0efc1f843e340675cc1e 406 Gene3D G3DSA:1.25.40.10 154 292 3.6E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_34900 b2a30964ef9f0efc1f843e340675cc1e 406 Pfam PF14559 Tetratricopeptide repeat 177 245 2.9E-9 T 14-10-2018 JV59_10450 d04e36b3fc2ac84ff71b62ff13c9f560 258 PIRSF PIRSF020736 2 257 1.2E-90 T 14-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 JV59_10450 d04e36b3fc2ac84ff71b62ff13c9f560 258 SUPERFAMILY SSF47240 11 255 3.81E-72 T 14-10-2018 IPR009078 Ferritin-like superfamily JV59_10450 d04e36b3fc2ac84ff71b62ff13c9f560 258 Gene3D G3DSA:1.20.1260.10 97 258 4.1E-55 T 14-10-2018 IPR012347 Ferritin-like JV59_10450 d04e36b3fc2ac84ff71b62ff13c9f560 258 Gene3D G3DSA:1.20.1260.10 7 76 1.0E-15 T 14-10-2018 IPR012347 Ferritin-like JV59_10450 d04e36b3fc2ac84ff71b62ff13c9f560 258 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 10 252 1.6E-116 T 14-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 JV59_18355 894f90a647da2474747a19a76cb1b9c9 516 Pfam PF01235 Sodium:alanine symporter family 96 500 1.3E-133 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_18355 894f90a647da2474747a19a76cb1b9c9 516 PRINTS PR00175 Sodium/alanine symporter signature 132 154 3.6E-49 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_18355 894f90a647da2474747a19a76cb1b9c9 516 PRINTS PR00175 Sodium/alanine symporter signature 461 481 3.6E-49 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_18355 894f90a647da2474747a19a76cb1b9c9 516 PRINTS PR00175 Sodium/alanine symporter signature 265 284 3.6E-49 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_18355 894f90a647da2474747a19a76cb1b9c9 516 PRINTS PR00175 Sodium/alanine symporter signature 400 422 3.6E-49 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_18355 894f90a647da2474747a19a76cb1b9c9 516 PRINTS PR00175 Sodium/alanine symporter signature 237 255 3.6E-49 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_18355 894f90a647da2474747a19a76cb1b9c9 516 PRINTS PR00175 Sodium/alanine symporter signature 355 373 3.6E-49 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_18355 894f90a647da2474747a19a76cb1b9c9 516 TIGRFAM TIGR00835 agcS: amino acid carrier protein 58 492 9.4E-123 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_29040 fd445a566df07501fa9dc17aad1c11e4 1033 Gene3D G3DSA:1.20.1640.10 25 523 4.1E-257 T 14-10-2018 JV59_29040 fd445a566df07501fa9dc17aad1c11e4 1033 SUPERFAMILY SSF82714 727 802 4.19E-8 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_29040 fd445a566df07501fa9dc17aad1c11e4 1033 SUPERFAMILY SSF82693 151 338 4.19E-18 T 14-10-2018 JV59_29040 fd445a566df07501fa9dc17aad1c11e4 1033 Gene3D G3DSA:3.30.70.1320 151 343 4.1E-257 T 14-10-2018 JV59_29040 fd445a566df07501fa9dc17aad1c11e4 1033 SUPERFAMILY SSF82714 199 282 3.92E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_29040 fd445a566df07501fa9dc17aad1c11e4 1033 SUPERFAMILY SSF82866 307 506 1.57E-33 T 14-10-2018 JV59_29040 fd445a566df07501fa9dc17aad1c11e4 1033 Gene3D G3DSA:3.30.70.1430 55 819 4.1E-257 T 14-10-2018 JV59_29040 fd445a566df07501fa9dc17aad1c11e4 1033 SUPERFAMILY SSF82693 55 150 4.53E-23 T 14-10-2018 JV59_29040 fd445a566df07501fa9dc17aad1c11e4 1033 Pfam PF00873 AcrB/AcrD/AcrF family 19 1027 3.1E-170 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29040 fd445a566df07501fa9dc17aad1c11e4 1033 SUPERFAMILY SSF82866 807 1030 2.09E-45 T 14-10-2018 JV59_29040 fd445a566df07501fa9dc17aad1c11e4 1033 Gene3D G3DSA:3.30.2090.10 721 811 4.1E-257 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_29040 fd445a566df07501fa9dc17aad1c11e4 1033 Gene3D G3DSA:3.30.70.1440 670 871 4.1E-257 T 14-10-2018 JV59_29040 fd445a566df07501fa9dc17aad1c11e4 1033 PRINTS PR00702 Acriflavin resistance protein family signature 347 370 5.7E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29040 fd445a566df07501fa9dc17aad1c11e4 1033 PRINTS PR00702 Acriflavin resistance protein family signature 25 49 5.7E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29040 fd445a566df07501fa9dc17aad1c11e4 1033 PRINTS PR00702 Acriflavin resistance protein family signature 454 477 5.7E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29040 fd445a566df07501fa9dc17aad1c11e4 1033 PRINTS PR00702 Acriflavin resistance protein family signature 53 71 5.7E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29040 fd445a566df07501fa9dc17aad1c11e4 1033 PRINTS PR00702 Acriflavin resistance protein family signature 401 425 5.7E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29040 fd445a566df07501fa9dc17aad1c11e4 1033 PRINTS PR00702 Acriflavin resistance protein family signature 479 502 5.7E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_29040 fd445a566df07501fa9dc17aad1c11e4 1033 Gene3D G3DSA:1.20.1640.10 524 1023 4.1E-257 T 14-10-2018 JV59_29040 fd445a566df07501fa9dc17aad1c11e4 1033 Gene3D G3DSA:3.30.2090.10 194 286 4.1E-257 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_29040 fd445a566df07501fa9dc17aad1c11e4 1033 Gene3D G3DSA:3.30.70.1430 571 669 4.1E-257 T 14-10-2018 JV59_00090 33dd74095add75a15b87bee8985de396 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 355 8.2E-123 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 JV59_00090 33dd74095add75a15b87bee8985de396 362 Pfam PF01761 3-dehydroquinate synthase 68 325 5.8E-112 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 JV59_00090 33dd74095add75a15b87bee8985de396 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 356 73.32 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 JV59_00090 33dd74095add75a15b87bee8985de396 362 PIRSF PIRSF001455 15 359 4.4E-109 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 JV59_00090 33dd74095add75a15b87bee8985de396 362 Gene3D G3DSA:1.20.1090.10 173 362 4.2E-72 T 14-10-2018 JV59_00090 33dd74095add75a15b87bee8985de396 362 SUPERFAMILY SSF56796 4 356 1.14E-116 T 14-10-2018 JV59_00090 33dd74095add75a15b87bee8985de396 362 Gene3D G3DSA:3.40.50.1970 1 172 1.3E-64 T 14-10-2018 JV59_39125 216d7c422dce1d161d678409c49296be 328 SUPERFAMILY SSF56112 6 328 2.04E-89 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily JV59_39125 216d7c422dce1d161d678409c49296be 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 46.697 T 14-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 JV59_39125 216d7c422dce1d161d678409c49296be 328 Gene3D G3DSA:3.30.200.70 13 108 1.6E-123 T 14-10-2018 JV59_39125 216d7c422dce1d161d678409c49296be 328 Gene3D G3DSA:1.10.510.10 60 258 1.6E-123 T 14-10-2018 JV59_39125 216d7c422dce1d161d678409c49296be 328 Gene3D G3DSA:1.20.1270.170 149 307 1.6E-123 T 14-10-2018 JV59_39125 216d7c422dce1d161d678409c49296be 328 Pfam PF01636 Phosphotransferase enzyme family 35 254 2.9E-41 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase JV59_17250 b72788bf70e0db7bb1e6d8d30ff0d2ce 762 Pfam PF00909 Ammonium Transporter Family 10 382 2.0E-88 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 JV59_17250 b72788bf70e0db7bb1e6d8d30ff0d2ce 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 716 734 6.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_17250 b72788bf70e0db7bb1e6d8d30ff0d2ce 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 685 699 6.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_17250 b72788bf70e0db7bb1e6d8d30ff0d2ce 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 703 713 6.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_17250 b72788bf70e0db7bb1e6d8d30ff0d2ce 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 741 754 6.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_17250 b72788bf70e0db7bb1e6d8d30ff0d2ce 762 SMART SM00387 642 757 1.5E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_17250 b72788bf70e0db7bb1e6d8d30ff0d2ce 762 Gene3D G3DSA:1.10.3430.10 2 398 5.7E-109 T 14-10-2018 IPR029020 Ammonium/urea transporter JV59_17250 b72788bf70e0db7bb1e6d8d30ff0d2ce 762 SUPERFAMILY SSF47384 500 590 1.57E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_17250 b72788bf70e0db7bb1e6d8d30ff0d2ce 762 Gene3D G3DSA:1.10.287.130 460 594 6.6E-16 T 14-10-2018 JV59_17250 b72788bf70e0db7bb1e6d8d30ff0d2ce 762 Gene3D G3DSA:3.30.565.10 600 757 2.2E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_17250 b72788bf70e0db7bb1e6d8d30ff0d2ce 762 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 646 754 3.8E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_17250 b72788bf70e0db7bb1e6d8d30ff0d2ce 762 ProSitePatterns PS01219 Ammonium transporters signature. 146 171 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 JV59_17250 b72788bf70e0db7bb1e6d8d30ff0d2ce 762 SUPERFAMILY SSF111352 5 367 9.94E-84 T 14-10-2018 JV59_17250 b72788bf70e0db7bb1e6d8d30ff0d2ce 762 SUPERFAMILY SSF55874 600 753 4.85E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_20695 9d81fb794fa586b1a0bfa507d81e2bc6 466 Gene3D G3DSA:1.10.40.30 408 459 1.7E-18 T 14-10-2018 JV59_20695 9d81fb794fa586b1a0bfa507d81e2bc6 466 SUPERFAMILY SSF48557 10 460 2.36E-131 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 JV59_20695 9d81fb794fa586b1a0bfa507d81e2bc6 466 Gene3D G3DSA:1.20.200.10 139 405 1.4E-95 T 14-10-2018 JV59_20695 9d81fb794fa586b1a0bfa507d81e2bc6 466 Pfam PF00206 Lyase 18 342 1.4E-88 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal JV59_20695 9d81fb794fa586b1a0bfa507d81e2bc6 466 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 JV59_20695 9d81fb794fa586b1a0bfa507d81e2bc6 466 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 1.9E-30 T 14-10-2018 IPR000362 Fumarate lyase family JV59_20695 9d81fb794fa586b1a0bfa507d81e2bc6 466 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 1.9E-30 T 14-10-2018 IPR000362 Fumarate lyase family JV59_20695 9d81fb794fa586b1a0bfa507d81e2bc6 466 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 1.9E-30 T 14-10-2018 IPR000362 Fumarate lyase family JV59_20695 9d81fb794fa586b1a0bfa507d81e2bc6 466 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 1.9E-30 T 14-10-2018 IPR000362 Fumarate lyase family JV59_20695 9d81fb794fa586b1a0bfa507d81e2bc6 466 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 3.1E-5 T 14-10-2018 JV59_20695 9d81fb794fa586b1a0bfa507d81e2bc6 466 PRINTS PR00145 Argininosuccinate lyase family signature 133 155 3.1E-5 T 14-10-2018 JV59_20695 9d81fb794fa586b1a0bfa507d81e2bc6 466 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 3.1E-5 T 14-10-2018 JV59_20695 9d81fb794fa586b1a0bfa507d81e2bc6 466 Pfam PF10415 Fumarase C C-terminus 408 460 4.0E-19 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 JV59_20695 9d81fb794fa586b1a0bfa507d81e2bc6 466 Hamap MF_00743 Fumarate hydratase class II [fumC]. 10 462 73.22 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 JV59_20695 9d81fb794fa586b1a0bfa507d81e2bc6 466 Gene3D G3DSA:1.10.275.10 8 138 2.8E-48 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal JV59_33560 f3868415faec0f7d269db4824d7fa4f0 140 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 135 6.7E-52 T 14-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 JV59_33560 f3868415faec0f7d269db4824d7fa4f0 140 Gene3D G3DSA:2.20.25.10 1 43 2.3E-20 T 14-10-2018 JV59_33560 f3868415faec0f7d269db4824d7fa4f0 140 SUPERFAMILY SSF82784 1 135 1.3E-41 T 14-10-2018 IPR036102 OsmC/Ohr superfamily JV59_33560 f3868415faec0f7d269db4824d7fa4f0 140 Gene3D G3DSA:3.30.300.20 44 140 6.7E-32 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JV59_33560 f3868415faec0f7d269db4824d7fa4f0 140 Pfam PF02566 OsmC-like protein 38 133 4.3E-17 T 14-10-2018 IPR003718 OsmC/Ohr family JV59_19035 4aac560b7ae32282b86df022cf58d287 411 SMART SM00267 228 411 1.1E-39 T 14-10-2018 IPR000160 GGDEF domain JV59_19035 4aac560b7ae32282b86df022cf58d287 411 SUPERFAMILY SSF55073 243 408 4.32E-35 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_19035 4aac560b7ae32282b86df022cf58d287 411 Pfam PF00990 Diguanylate cyclase, GGDEF domain 362 407 2.3E-7 T 14-10-2018 IPR000160 GGDEF domain JV59_19035 4aac560b7ae32282b86df022cf58d287 411 Pfam PF00990 Diguanylate cyclase, GGDEF domain 239 347 1.3E-22 T 14-10-2018 IPR000160 GGDEF domain JV59_19035 4aac560b7ae32282b86df022cf58d287 411 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 237 346 2.5E-23 T 14-10-2018 IPR000160 GGDEF domain JV59_19035 4aac560b7ae32282b86df022cf58d287 411 Gene3D G3DSA:3.30.70.270 232 410 9.9E-44 T 14-10-2018 JV59_20375 c301728dbcdfcc3c33972dabb9ae75e4 382 Pfam PF00107 Zinc-binding dehydrogenase 208 338 1.3E-26 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JV59_20375 c301728dbcdfcc3c33972dabb9ae75e4 382 Gene3D G3DSA:3.90.180.10 17 375 1.2E-152 T 14-10-2018 JV59_20375 c301728dbcdfcc3c33972dabb9ae75e4 382 SUPERFAMILY SSF51735 171 345 9.81E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_20375 c301728dbcdfcc3c33972dabb9ae75e4 382 SUPERFAMILY SSF50129 11 196 5.75E-72 T 14-10-2018 IPR011032 GroES-like superfamily JV59_20375 c301728dbcdfcc3c33972dabb9ae75e4 382 SMART SM00829 23 378 0.0014 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JV59_20375 c301728dbcdfcc3c33972dabb9ae75e4 382 Gene3D G3DSA:3.40.50.720 185 323 1.2E-152 T 14-10-2018 JV59_20375 c301728dbcdfcc3c33972dabb9ae75e4 382 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 13 380 6.8E-230 T 14-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 JV59_20375 c301728dbcdfcc3c33972dabb9ae75e4 382 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 39 165 1.8E-25 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JV59_20375 c301728dbcdfcc3c33972dabb9ae75e4 382 SUPERFAMILY SSF50129 329 379 3.86E-11 T 14-10-2018 IPR011032 GroES-like superfamily JV59_20375 c301728dbcdfcc3c33972dabb9ae75e4 382 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 72 86 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 JV59_39690 31c1d3ba32b7d2d57f6c4922a1e28306 1040 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 7.4E-273 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_39690 31c1d3ba32b7d2d57f6c4922a1e28306 1040 SUPERFAMILY SSF82714 701 783 1.57E-18 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_39690 31c1d3ba32b7d2d57f6c4922a1e28306 1040 Gene3D G3DSA:1.20.1640.10 501 1001 3.5E-287 T 14-10-2018 JV59_39690 31c1d3ba32b7d2d57f6c4922a1e28306 1040 SUPERFAMILY SSF82693 41 130 1.65E-23 T 14-10-2018 JV59_39690 31c1d3ba32b7d2d57f6c4922a1e28306 1040 Gene3D G3DSA:3.30.70.1430 555 647 3.5E-287 T 14-10-2018 JV59_39690 31c1d3ba32b7d2d57f6c4922a1e28306 1040 SUPERFAMILY SSF82866 782 1008 2.88E-46 T 14-10-2018 JV59_39690 31c1d3ba32b7d2d57f6c4922a1e28306 1040 Gene3D G3DSA:3.30.2090.10 178 268 3.5E-287 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_39690 31c1d3ba32b7d2d57f6c4922a1e28306 1040 Gene3D G3DSA:3.30.70.1440 648 843 3.5E-287 T 14-10-2018 JV59_39690 31c1d3ba32b7d2d57f6c4922a1e28306 1040 SUPERFAMILY SSF82693 136 323 4.19E-22 T 14-10-2018 JV59_39690 31c1d3ba32b7d2d57f6c4922a1e28306 1040 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.1E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_39690 31c1d3ba32b7d2d57f6c4922a1e28306 1040 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 3.1E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_39690 31c1d3ba32b7d2d57f6c4922a1e28306 1040 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 3.1E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_39690 31c1d3ba32b7d2d57f6c4922a1e28306 1040 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 3.1E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_39690 31c1d3ba32b7d2d57f6c4922a1e28306 1040 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 3.1E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_39690 31c1d3ba32b7d2d57f6c4922a1e28306 1040 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 3.1E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_39690 31c1d3ba32b7d2d57f6c4922a1e28306 1040 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.1E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_39690 31c1d3ba32b7d2d57f6c4922a1e28306 1040 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 3.1E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_39690 31c1d3ba32b7d2d57f6c4922a1e28306 1040 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 3.1E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_39690 31c1d3ba32b7d2d57f6c4922a1e28306 1040 Gene3D G3DSA:3.30.2090.10 698 786 3.5E-287 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_39690 31c1d3ba32b7d2d57f6c4922a1e28306 1040 Gene3D G3DSA:3.30.70.1320 134 325 3.5E-287 T 14-10-2018 JV59_39690 31c1d3ba32b7d2d57f6c4922a1e28306 1040 Gene3D G3DSA:3.30.70.1430 40 794 3.5E-287 T 14-10-2018 JV59_39690 31c1d3ba32b7d2d57f6c4922a1e28306 1040 SUPERFAMILY SSF82714 182 263 4.71E-16 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_39690 31c1d3ba32b7d2d57f6c4922a1e28306 1040 SUPERFAMILY SSF82693 553 650 4.58E-21 T 14-10-2018 JV59_39690 31c1d3ba32b7d2d57f6c4922a1e28306 1040 Gene3D G3DSA:1.20.1640.10 10 500 3.5E-287 T 14-10-2018 JV59_39690 31c1d3ba32b7d2d57f6c4922a1e28306 1040 SUPERFAMILY SSF82866 290 489 3.4E-46 T 14-10-2018 JV59_20955 aa0e45f0c6fd17bc8accb7c87eb9708c 391 Gene3D G3DSA:3.90.1150.10 15 377 1.9E-112 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_20955 aa0e45f0c6fd17bc8accb7c87eb9708c 391 Pfam PF00155 Aminotransferase class I and II 26 375 1.5E-41 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JV59_20955 aa0e45f0c6fd17bc8accb7c87eb9708c 391 Gene3D G3DSA:3.40.640.10 60 274 1.9E-112 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_20955 aa0e45f0c6fd17bc8accb7c87eb9708c 391 SUPERFAMILY SSF53383 3 380 1.34E-93 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_37035 30cd0d367497c01c564057aacb6978eb 218 Gene3D G3DSA:3.30.70.260 125 196 2.6E-77 T 14-10-2018 JV59_37035 30cd0d367497c01c564057aacb6978eb 218 Gene3D G3DSA:3.40.50.1360 7 207 2.6E-77 T 14-10-2018 JV59_37035 30cd0d367497c01c564057aacb6978eb 218 SUPERFAMILY SSF75445 127 198 1.02E-23 T 14-10-2018 JV59_37035 30cd0d367497c01c564057aacb6978eb 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 1.1E-67 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 JV59_37035 30cd0d367497c01c564057aacb6978eb 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 4.9E-58 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 JV59_37035 30cd0d367497c01c564057aacb6978eb 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.075 T 14-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 JV59_37035 30cd0d367497c01c564057aacb6978eb 218 SUPERFAMILY SSF100950 1 146 8.37E-46 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JV59_01885 bf7a50cb94d14f05fa80939ccabd8c7d 582 Gene3D G3DSA:3.30.450.20 259 397 4.6E-21 T 14-10-2018 JV59_01885 bf7a50cb94d14f05fa80939ccabd8c7d 582 Pfam PF08448 PAS fold 285 395 3.1E-17 T 14-10-2018 IPR013656 PAS fold-4 JV59_01885 bf7a50cb94d14f05fa80939ccabd8c7d 582 SMART SM00267 401 577 1.3E-71 T 14-10-2018 IPR000160 GGDEF domain JV59_01885 bf7a50cb94d14f05fa80939ccabd8c7d 582 SUPERFAMILY SSF55785 266 392 1.41E-19 T 14-10-2018 IPR035965 PAS domain superfamily JV59_01885 bf7a50cb94d14f05fa80939ccabd8c7d 582 SUPERFAMILY SSF55073 417 577 2.43E-46 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_01885 bf7a50cb94d14f05fa80939ccabd8c7d 582 Pfam PF13188 PAS domain 161 204 0.097 T 14-10-2018 IPR000014 PAS domain JV59_01885 bf7a50cb94d14f05fa80939ccabd8c7d 582 SMART SM00091 279 346 5.6E-4 T 14-10-2018 IPR000014 PAS domain JV59_01885 bf7a50cb94d14f05fa80939ccabd8c7d 582 SMART SM00091 158 223 180.0 T 14-10-2018 IPR000014 PAS domain JV59_01885 bf7a50cb94d14f05fa80939ccabd8c7d 582 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 408 576 3.8E-48 T 14-10-2018 IPR000160 GGDEF domain JV59_01885 bf7a50cb94d14f05fa80939ccabd8c7d 582 Gene3D G3DSA:3.30.70.270 398 577 8.5E-56 T 14-10-2018 JV59_01885 bf7a50cb94d14f05fa80939ccabd8c7d 582 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 276 401 6.1E-15 T 14-10-2018 IPR000014 PAS domain JV59_01885 bf7a50cb94d14f05fa80939ccabd8c7d 582 SUPERFAMILY SSF55785 155 251 2.27E-5 T 14-10-2018 IPR035965 PAS domain superfamily JV59_01885 bf7a50cb94d14f05fa80939ccabd8c7d 582 Pfam PF00990 Diguanylate cyclase, GGDEF domain 413 573 1.0E-49 T 14-10-2018 IPR000160 GGDEF domain JV59_38520 f02221e7e61a316aff438cebc45dd2ba 447 ProSitePatterns PS00455 Putative AMP-binding domain signature. 124 135 - T 14-10-2018 IPR020845 AMP-binding, conserved site JV59_38520 f02221e7e61a316aff438cebc45dd2ba 447 Gene3D G3DSA:3.30.300.310 352 447 1.8E-19 T 14-10-2018 JV59_38520 f02221e7e61a316aff438cebc45dd2ba 447 Gene3D G3DSA:3.40.50.12780 2 351 6.9E-54 T 14-10-2018 JV59_38520 f02221e7e61a316aff438cebc45dd2ba 447 Pfam PF13193 AMP-binding enzyme C-terminal domain 364 436 3.0E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JV59_38520 f02221e7e61a316aff438cebc45dd2ba 447 SUPERFAMILY SSF56801 3 444 8.37E-83 T 14-10-2018 JV59_38520 f02221e7e61a316aff438cebc45dd2ba 447 Pfam PF00501 AMP-binding enzyme 112 353 7.9E-33 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JV59_38520 f02221e7e61a316aff438cebc45dd2ba 447 Pfam PF00501 AMP-binding enzyme 10 108 8.3E-11 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JV59_38805 c4bc3e211de83600cda7f85e02565925 182 Pfam PF00293 NUDIX domain 46 155 9.8E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JV59_38805 c4bc3e211de83600cda7f85e02565925 182 SUPERFAMILY SSF55811 7 179 1.33E-39 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JV59_38805 c4bc3e211de83600cda7f85e02565925 182 Gene3D G3DSA:3.90.79.10 7 182 2.1E-48 T 14-10-2018 JV59_38805 c4bc3e211de83600cda7f85e02565925 182 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JV59_22955 8f526d3f775a71797a731f00a6f5e6a6 258 Gene3D G3DSA:3.20.20.150 1 258 7.4E-83 T 14-10-2018 JV59_22955 8f526d3f775a71797a731f00a6f5e6a6 258 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 3 255 3.3E-123 T 14-10-2018 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 JV59_22955 8f526d3f775a71797a731f00a6f5e6a6 258 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 4.9E-32 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain JV59_22955 8f526d3f775a71797a731f00a6f5e6a6 258 SUPERFAMILY SSF51658 1 254 2.35E-88 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily JV59_22955 8f526d3f775a71797a731f00a6f5e6a6 258 PIRSF PIRSF006241 1 258 1.3E-97 T 14-10-2018 IPR026040 Hydroxypyruvate isomerase-like JV59_27270 8d999b8bee722688f215a8a538a72532 321 Pfam PF00691 OmpA family 212 306 5.4E-22 T 14-10-2018 IPR006665 OmpA-like domain JV59_27270 8d999b8bee722688f215a8a538a72532 321 Gene3D G3DSA:3.30.1330.60 185 314 2.4E-37 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_27270 8d999b8bee722688f215a8a538a72532 321 ProSitePatterns PS01068 OmpA-like domain. 244 288 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 JV59_27270 8d999b8bee722688f215a8a538a72532 321 PRINTS PR01021 OMPA domain signature 212 234 2.7E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_27270 8d999b8bee722688f215a8a538a72532 321 PRINTS PR01021 OMPA domain signature 257 273 2.7E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_27270 8d999b8bee722688f215a8a538a72532 321 PRINTS PR01021 OMPA domain signature 242 257 2.7E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_27270 8d999b8bee722688f215a8a538a72532 321 SUPERFAMILY SSF103088 192 312 2.62E-35 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_27270 8d999b8bee722688f215a8a538a72532 321 Pfam PF01389 OmpA-like transmembrane domain 20 170 6.0E-27 T 14-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 JV59_27270 8d999b8bee722688f215a8a538a72532 321 SUPERFAMILY SSF56925 21 171 7.59E-27 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JV59_27270 8d999b8bee722688f215a8a538a72532 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 275 294 4.5E-6 T 14-10-2018 JV59_27270 8d999b8bee722688f215a8a538a72532 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 257 274 4.5E-6 T 14-10-2018 JV59_27270 8d999b8bee722688f215a8a538a72532 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 295 315 4.5E-6 T 14-10-2018 JV59_27270 8d999b8bee722688f215a8a538a72532 321 Gene3D G3DSA:2.40.160.20 5 184 1.3E-35 T 14-10-2018 JV59_38420 859161bd8959bd444f01807019f4e829 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 JV59_38420 859161bd8959bd444f01807019f4e829 96 SUPERFAMILY SSF50129 1 96 1.29E-30 T 14-10-2018 IPR011032 GroES-like superfamily JV59_38420 859161bd8959bd444f01807019f4e829 96 Gene3D G3DSA:2.30.33.40 1 96 2.6E-35 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 JV59_38420 859161bd8959bd444f01807019f4e829 96 PRINTS PR00297 10kDa chaperonin signature 3 18 1.7E-26 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JV59_38420 859161bd8959bd444f01807019f4e829 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.7E-26 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JV59_38420 859161bd8959bd444f01807019f4e829 96 PRINTS PR00297 10kDa chaperonin signature 25 46 1.7E-26 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JV59_38420 859161bd8959bd444f01807019f4e829 96 PRINTS PR00297 10kDa chaperonin signature 82 95 1.7E-26 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JV59_38420 859161bd8959bd444f01807019f4e829 96 SMART SM00883 2 95 8.0E-48 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JV59_38420 859161bd8959bd444f01807019f4e829 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 23.952 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JV59_38420 859161bd8959bd444f01807019f4e829 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 1.4E-30 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JV59_21290 c6f295dcdb0a01685b93fcc732d48d5e 187 SUPERFAMILY SSF81301 17 133 2.03E-6 T 14-10-2018 JV59_21290 c6f295dcdb0a01685b93fcc732d48d5e 187 Gene3D G3DSA:3.30.460.10 15 141 2.2E-12 T 14-10-2018 JV59_35260 7a59ed880ac413413120f1c3d78b6ce8 674 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 107 2.8E-20 T 14-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 JV59_35260 7a59ed880ac413413120f1c3d78b6ce8 674 Pfam PF07196 Flagellin hook IN motif 125 179 3.7E-6 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 JV59_35260 7a59ed880ac413413120f1c3d78b6ce8 674 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 438 663 1.6E-53 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 JV59_35025 c2ef77b48d3ea5c57989556950cdf338 76 Gene3D G3DSA:1.10.10.10 1 75 1.0E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_35025 c2ef77b48d3ea5c57989556950cdf338 76 Pfam PF09012 FeoC like transcriptional regulator 2 54 2.4E-14 T 14-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC JV59_35025 c2ef77b48d3ea5c57989556950cdf338 76 SUPERFAMILY SSF46785 1 55 1.5E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_17125 9bfb65fcd5a549933b22313d1ff5ed9b 166 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 158 4.9E-53 T 14-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 JV59_17125 9bfb65fcd5a549933b22313d1ff5ed9b 166 Gene3D G3DSA:3.40.50.300 2 165 1.2E-52 T 14-10-2018 JV59_17125 9bfb65fcd5a549933b22313d1ff5ed9b 166 SUPERFAMILY SSF52540 4 160 5.51E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_17125 9bfb65fcd5a549933b22313d1ff5ed9b 166 Pfam PF01202 Shikimate kinase 12 121 1.5E-16 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 JV59_29395 eeed736d4ec84668bf2b0e685784ac0e 295 SUPERFAMILY SSF46785 2 65 1.0E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_29395 eeed736d4ec84668bf2b0e685784ac0e 295 Pfam PF03466 LysR substrate binding domain 74 270 5.6E-11 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_29395 eeed736d4ec84668bf2b0e685784ac0e 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 46 1.5E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_29395 eeed736d4ec84668bf2b0e685784ac0e 295 Gene3D G3DSA:3.40.190.10 146 242 3.1E-25 T 14-10-2018 JV59_29395 eeed736d4ec84668bf2b0e685784ac0e 295 Gene3D G3DSA:3.40.190.10 82 267 3.1E-25 T 14-10-2018 JV59_29395 eeed736d4ec84668bf2b0e685784ac0e 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 5.7E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_29395 eeed736d4ec84668bf2b0e685784ac0e 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 3 14 5.7E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_29395 eeed736d4ec84668bf2b0e685784ac0e 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 14 24 5.7E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_29395 eeed736d4ec84668bf2b0e685784ac0e 295 Gene3D G3DSA:1.10.10.10 1 76 1.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_29395 eeed736d4ec84668bf2b0e685784ac0e 295 SUPERFAMILY SSF53850 74 274 2.33E-16 T 14-10-2018 JV59_23650 9412e79db21921f1727c18647cde39fa 264 Gene3D G3DSA:2.40.30.170 22 252 6.1E-49 T 14-10-2018 JV59_23650 9412e79db21921f1727c18647cde39fa 264 Gene3D G3DSA:1.10.287.470 66 143 6.1E-49 T 14-10-2018 JV59_23650 9412e79db21921f1727c18647cde39fa 264 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 22 246 9.3E-24 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JV59_23650 9412e79db21921f1727c18647cde39fa 264 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 22 256 2.4E-49 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 JV59_23650 9412e79db21921f1727c18647cde39fa 264 Gene3D G3DSA:2.40.50.100 32 178 6.1E-49 T 14-10-2018 JV59_23650 9412e79db21921f1727c18647cde39fa 264 SUPERFAMILY SSF111369 21 249 2.88E-30 T 14-10-2018 JV59_21045 671b0729831e5bb944fb8e9e2d5b8849 155 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 8.4E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_21045 671b0729831e5bb944fb8e9e2d5b8849 155 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 8.4E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_21045 671b0729831e5bb944fb8e9e2d5b8849 155 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 8.4E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_21045 671b0729831e5bb944fb8e9e2d5b8849 155 Gene3D G3DSA:1.10.1660.10 1 126 1.7E-31 T 14-10-2018 JV59_21045 671b0729831e5bb944fb8e9e2d5b8849 155 SMART SM00422 3 71 3.6E-24 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_21045 671b0729831e5bb944fb8e9e2d5b8849 155 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_21045 671b0729831e5bb944fb8e9e2d5b8849 155 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 2 142 5.3E-69 T 14-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 JV59_21045 671b0729831e5bb944fb8e9e2d5b8849 155 SUPERFAMILY SSF46955 3 125 1.06E-28 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily JV59_21045 671b0729831e5bb944fb8e9e2d5b8849 155 Pfam PF13411 MerR HTH family regulatory protein 3 69 2.5E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_30115 eb5a52174d79db612c38bc74139bb6b2 92 Gene3D G3DSA:2.40.240.10 1 92 1.1E-33 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JV59_30115 eb5a52174d79db612c38bc74139bb6b2 92 Pfam PF01386 Ribosomal L25p family 4 89 4.2E-22 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 JV59_30115 eb5a52174d79db612c38bc74139bb6b2 92 SUPERFAMILY SSF50715 1 92 1.03E-27 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JV59_30115 eb5a52174d79db612c38bc74139bb6b2 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 2.0E-44 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 JV59_30115 eb5a52174d79db612c38bc74139bb6b2 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 26.388 T 14-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 JV59_20580 3048061202f28358867df12dd78d183a 398 Gene3D G3DSA:3.40.50.300 1 210 1.3E-75 T 14-10-2018 JV59_20580 3048061202f28358867df12dd78d183a 398 SMART SM00490 257 338 1.1E-29 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_20580 3048061202f28358867df12dd78d183a 398 SUPERFAMILY SSF52540 73 358 2.3E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_20580 3048061202f28358867df12dd78d183a 398 SMART SM00487 20 221 9.5E-61 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JV59_20580 3048061202f28358867df12dd78d183a 398 Gene3D G3DSA:3.40.50.300 212 372 6.9E-45 T 14-10-2018 JV59_20580 3048061202f28358867df12dd78d183a 398 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JV59_20580 3048061202f28358867df12dd78d183a 398 Pfam PF00270 DEAD/DEAH box helicase 25 194 9.5E-49 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JV59_20580 3048061202f28358867df12dd78d183a 398 Pfam PF00271 Helicase conserved C-terminal domain 229 337 2.2E-26 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_19745 3ab9aaa122ec233897148a45fc775a6f 692 Gene3D G3DSA:3.55.50.10 96 187 1.6E-92 T 14-10-2018 JV59_19745 3ab9aaa122ec233897148a45fc775a6f 692 SUPERFAMILY SSF69279 7 183 1.02E-56 T 14-10-2018 JV59_19745 3ab9aaa122ec233897148a45fc775a6f 692 SUPERFAMILY SSF69255 367 454 7.06E-32 T 14-10-2018 JV59_19745 3ab9aaa122ec233897148a45fc775a6f 692 SUPERFAMILY SSF69349 444 682 1.88E-48 T 14-10-2018 JV59_19745 3ab9aaa122ec233897148a45fc775a6f 692 Gene3D G3DSA:3.30.1920.30 229 288 1.6E-92 T 14-10-2018 JV59_19745 3ab9aaa122ec233897148a45fc775a6f 692 Pfam PF05954 Phage late control gene D protein (GPD) 26 331 9.8E-79 T 14-10-2018 JV59_19745 3ab9aaa122ec233897148a45fc775a6f 692 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 7 522 7.3E-194 T 14-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset JV59_19745 3ab9aaa122ec233897148a45fc775a6f 692 Gene3D G3DSA:2.30.110.50 18 332 1.6E-92 T 14-10-2018 JV59_19745 3ab9aaa122ec233897148a45fc775a6f 692 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 19 505 7.5E-127 T 14-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein JV59_19745 3ab9aaa122ec233897148a45fc775a6f 692 Gene3D G3DSA:2.40.50.230 358 458 7.9E-43 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily JV59_19745 3ab9aaa122ec233897148a45fc775a6f 692 SUPERFAMILY SSF69279 199 366 2.72E-33 T 14-10-2018 JV59_36925 8ee9e2ac11890c0a5f3f3462616615cd 127 Gene3D G3DSA:3.90.470.20 1 126 4.0E-41 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 JV59_36925 8ee9e2ac11890c0a5f3f3462616615cd 127 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.862 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 JV59_36925 8ee9e2ac11890c0a5f3f3462616615cd 127 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 5.4E-42 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 JV59_36925 8ee9e2ac11890c0a5f3f3462616615cd 127 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 89 9.0E-32 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 JV59_36925 8ee9e2ac11890c0a5f3f3462616615cd 127 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 6.4E-24 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 JV59_36925 8ee9e2ac11890c0a5f3f3462616615cd 127 SUPERFAMILY SSF56214 3 125 2.49E-31 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 JV59_36925 8ee9e2ac11890c0a5f3f3462616615cd 127 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 4.7E-32 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 JV59_39220 1da2d80fecdbed6c62029a2ee4903bfc 144 SUPERFAMILY SSF49764 6 137 1.08E-24 T 14-10-2018 IPR008978 HSP20-like chaperone JV59_39220 1da2d80fecdbed6c62029a2ee4903bfc 144 Gene3D G3DSA:2.60.40.790 34 137 5.9E-24 T 14-10-2018 IPR008978 HSP20-like chaperone JV59_39220 1da2d80fecdbed6c62029a2ee4903bfc 144 Pfam PF00011 Hsp20/alpha crystallin family 43 136 2.1E-20 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain JV59_31375 529fd954193d1b5554c6154d616b832b 471 SUPERFAMILY SSF56959 127 293 4.25E-5 T 14-10-2018 IPR036435 Leukocidin/porin MspA superfamily JV59_31375 529fd954193d1b5554c6154d616b832b 471 Gene3D G3DSA:3.30.70.2270 153 203 1.5E-82 T 14-10-2018 JV59_31375 529fd954193d1b5554c6154d616b832b 471 SMART SM00458 338 465 3.3E-26 T 14-10-2018 IPR000772 Ricin B, lectin domain JV59_31375 529fd954193d1b5554c6154d616b832b 471 Gene3D G3DSA:2.70.240.10 38 333 1.5E-82 T 14-10-2018 JV59_31375 529fd954193d1b5554c6154d616b832b 471 Pfam PF07968 Leukocidin/Hemolysin toxin family 71 330 4.9E-50 T 14-10-2018 IPR016183 Leukocidin/Hemolysin toxin GO:0005576|GO:0051715 JV59_31375 529fd954193d1b5554c6154d616b832b 471 Gene3D G3DSA:2.80.10.50 335 471 2.0E-41 T 14-10-2018 JV59_31375 529fd954193d1b5554c6154d616b832b 471 Pfam PF00652 Ricin-type beta-trefoil lectin domain 339 431 1.2E-13 T 14-10-2018 IPR000772 Ricin B, lectin domain JV59_31375 529fd954193d1b5554c6154d616b832b 471 SUPERFAMILY SSF50370 341 463 1.97E-19 T 14-10-2018 IPR035992 Ricin B-like lectins JV59_25195 44eb633daa21260b3c21a481cc014e6c 457 Pfam PF00772 DnaB-like helicase N terminal domain 20 121 3.1E-35 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 JV59_25195 44eb633daa21260b3c21a481cc014e6c 457 Gene3D G3DSA:3.40.50.300 178 454 1.6E-98 T 14-10-2018 JV59_25195 44eb633daa21260b3c21a481cc014e6c 457 SUPERFAMILY SSF52540 193 444 1.19E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_25195 44eb633daa21260b3c21a481cc014e6c 457 Gene3D G3DSA:1.10.860.10 13 174 1.0E-53 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal JV59_25195 44eb633daa21260b3c21a481cc014e6c 457 SUPERFAMILY SSF48024 17 129 9.81E-38 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 JV59_25195 44eb633daa21260b3c21a481cc014e6c 457 Pfam PF03796 DnaB-like helicase C terminal domain 195 450 9.0E-104 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 JV59_25195 44eb633daa21260b3c21a481cc014e6c 457 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 20 452 1.2E-161 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 JV59_36895 41bc69ee5ed4e69978c7423932d7df16 432 SUPERFAMILY SSF51604 143 429 3.11E-126 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily JV59_36895 41bc69ee5ed4e69978c7423932d7df16 432 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 3.4E-136 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JV59_36895 41bc69ee5ed4e69978c7423932d7df16 432 SUPERFAMILY SSF54826 3 138 1.28E-56 T 14-10-2018 JV59_36895 41bc69ee5ed4e69978c7423932d7df16 432 Gene3D G3DSA:3.20.20.120 128 432 5.1E-132 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily JV59_36895 41bc69ee5ed4e69978c7423932d7df16 432 SMART SM01193 4 134 1.5E-93 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JV59_36895 41bc69ee5ed4e69978c7423932d7df16 432 SMART SM01192 143 431 4.9E-213 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JV59_36895 41bc69ee5ed4e69978c7423932d7df16 432 Gene3D G3DSA:3.30.390.10 1 127 1.6E-55 T 14-10-2018 IPR029017 Enolase-like, N-terminal JV59_36895 41bc69ee5ed4e69978c7423932d7df16 432 ProSitePatterns PS00164 Enolase signature. 340 353 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_36895 41bc69ee5ed4e69978c7423932d7df16 432 Pfam PF03952 Enolase, N-terminal domain 4 134 1.0E-58 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JV59_36895 41bc69ee5ed4e69978c7423932d7df16 432 PRINTS PR00148 Enolase signature 317 328 3.9E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JV59_36895 41bc69ee5ed4e69978c7423932d7df16 432 PRINTS PR00148 Enolase signature 37 51 3.9E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JV59_36895 41bc69ee5ed4e69978c7423932d7df16 432 PRINTS PR00148 Enolase signature 165 178 3.9E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JV59_36895 41bc69ee5ed4e69978c7423932d7df16 432 PRINTS PR00148 Enolase signature 107 123 3.9E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JV59_36895 41bc69ee5ed4e69978c7423932d7df16 432 PRINTS PR00148 Enolase signature 340 354 3.9E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JV59_36895 41bc69ee5ed4e69978c7423932d7df16 432 PRINTS PR00148 Enolase signature 369 386 3.9E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JV59_36895 41bc69ee5ed4e69978c7423932d7df16 432 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 5.8E-206 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JV59_36895 41bc69ee5ed4e69978c7423932d7df16 432 PIRSF PIRSF001400 1 431 1.2E-191 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JV59_36895 41bc69ee5ed4e69978c7423932d7df16 432 Hamap MF_00318 Enolase [eno]. 2 417 44.445 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JV59_39150 df72e903bc8201ca0b12a8c990b2cb9f 548 SUPERFAMILY SSF52518 1 179 1.69E-62 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_39150 df72e903bc8201ca0b12a8c990b2cb9f 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 JV59_39150 df72e903bc8201ca0b12a8c990b2cb9f 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 188 322 8.2E-40 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 JV59_39150 df72e903bc8201ca0b12a8c990b2cb9f 548 Gene3D G3DSA:3.40.50.1220 180 351 4.1E-52 T 14-10-2018 JV59_39150 df72e903bc8201ca0b12a8c990b2cb9f 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 1.7E-209 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 JV59_39150 df72e903bc8201ca0b12a8c990b2cb9f 548 Gene3D G3DSA:3.40.50.970 1 174 3.0E-67 T 14-10-2018 JV59_39150 df72e903bc8201ca0b12a8c990b2cb9f 548 SUPERFAMILY SSF52467 184 341 2.07E-55 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JV59_39150 df72e903bc8201ca0b12a8c990b2cb9f 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 8.3E-48 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JV59_39150 df72e903bc8201ca0b12a8c990b2cb9f 548 Gene3D G3DSA:3.40.50.970 352 548 5.8E-65 T 14-10-2018 JV59_39150 df72e903bc8201ca0b12a8c990b2cb9f 548 SUPERFAMILY SSF52518 359 545 2.14E-64 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_39150 df72e903bc8201ca0b12a8c990b2cb9f 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 2.8E-55 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 JV59_30080 1f58296970c53ca79642cffb45bbb00e 443 SUPERFAMILY SSF103473 15 439 3.27E-28 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_30080 1f58296970c53ca79642cffb45bbb00e 443 Gene3D G3DSA:1.20.1250.20 14 434 1.8E-18 T 14-10-2018 JV59_30080 1f58296970c53ca79642cffb45bbb00e 443 Pfam PF07690 Major Facilitator Superfamily 19 382 6.9E-10 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_29690 7ec128b488f7eafd6e774daf7a2dfe20 463 Gene3D G3DSA:2.20.200.10 110 349 1.1E-79 T 14-10-2018 JV59_29690 7ec128b488f7eafd6e774daf7a2dfe20 463 Pfam PF02321 Outer membrane efflux protein 273 458 2.0E-23 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 JV59_29690 7ec128b488f7eafd6e774daf7a2dfe20 463 Pfam PF02321 Outer membrane efflux protein 73 251 1.8E-20 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 JV59_29690 7ec128b488f7eafd6e774daf7a2dfe20 463 SUPERFAMILY SSF56954 2 460 2.22E-73 T 14-10-2018 JV59_29690 7ec128b488f7eafd6e774daf7a2dfe20 463 Gene3D G3DSA:1.20.1600.10 71 459 1.1E-79 T 14-10-2018 JV59_26035 92a7d9bc4fe44ce28fe96c23ae8a2036 181 SUPERFAMILY SSF53098 3 180 3.65E-49 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JV59_26035 92a7d9bc4fe44ce28fe96c23ae8a2036 181 SMART SM00479 7 180 1.3E-21 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III JV59_26035 92a7d9bc4fe44ce28fe96c23ae8a2036 181 Pfam PF00929 Exonuclease 9 170 7.1E-35 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III JV59_26035 92a7d9bc4fe44ce28fe96c23ae8a2036 181 Gene3D G3DSA:3.30.420.10 1 181 4.6E-74 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JV59_26035 92a7d9bc4fe44ce28fe96c23ae8a2036 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 43.391 T 14-10-2018 IPR022894 Oligoribonuclease GO:0000175 JV59_30435 8fa51ae7a0016a87a4a637e6749ca4fd 221 Pfam PF10881 Protein of unknown function (DUF2726) 38 158 8.0E-36 T 14-10-2018 IPR024402 Domain of unknown function DUF2726 JV59_30435 8fa51ae7a0016a87a4a637e6749ca4fd 221 PIRSF PIRSF028063 1 220 3.7E-121 T 14-10-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger JV59_21065 c9b3ae88277d6db5e72f9ee9a5612c2c 173 SUPERFAMILY SSF46955 2 103 1.61E-23 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily JV59_21065 c9b3ae88277d6db5e72f9ee9a5612c2c 173 Gene3D G3DSA:1.10.1660.10 1 138 1.3E-25 T 14-10-2018 JV59_21065 c9b3ae88277d6db5e72f9ee9a5612c2c 173 Pfam PF13411 MerR HTH family regulatory protein 3 69 4.3E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_21065 c9b3ae88277d6db5e72f9ee9a5612c2c 173 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 5.2E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_21065 c9b3ae88277d6db5e72f9ee9a5612c2c 173 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 5.2E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_21065 c9b3ae88277d6db5e72f9ee9a5612c2c 173 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 5.2E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_21065 c9b3ae88277d6db5e72f9ee9a5612c2c 173 SMART SM00422 2 71 3.0E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_35480 888a4de8253c36b3e35abd8d08c97ab1 290 SMART SM00881 4 100 6.0E-36 T 14-10-2018 IPR003781 CoA-binding GO:0048037 JV59_35480 888a4de8253c36b3e35abd8d08c97ab1 290 SUPERFAMILY SSF51735 1 122 4.5E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_35480 888a4de8253c36b3e35abd8d08c97ab1 290 Gene3D G3DSA:3.40.50.720 2 123 1.1E-51 T 14-10-2018 JV59_35480 888a4de8253c36b3e35abd8d08c97ab1 290 Gene3D G3DSA:3.40.50.261 124 288 6.6E-76 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 JV59_35480 888a4de8253c36b3e35abd8d08c97ab1 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site JV59_35480 888a4de8253c36b3e35abd8d08c97ab1 290 Pfam PF02629 CoA binding domain 6 99 3.1E-31 T 14-10-2018 IPR003781 CoA-binding GO:0048037 JV59_35480 888a4de8253c36b3e35abd8d08c97ab1 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.8E-40 T 14-10-2018 JV59_35480 888a4de8253c36b3e35abd8d08c97ab1 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.8E-40 T 14-10-2018 JV59_35480 888a4de8253c36b3e35abd8d08c97ab1 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.8E-40 T 14-10-2018 JV59_35480 888a4de8253c36b3e35abd8d08c97ab1 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.8E-40 T 14-10-2018 JV59_35480 888a4de8253c36b3e35abd8d08c97ab1 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site JV59_35480 888a4de8253c36b3e35abd8d08c97ab1 290 SUPERFAMILY SSF52210 123 285 2.49E-55 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 JV59_35480 888a4de8253c36b3e35abd8d08c97ab1 290 Pfam PF00549 CoA-ligase 151 271 3.2E-22 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 JV59_35480 888a4de8253c36b3e35abd8d08c97ab1 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 3.6E-146 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 JV59_35480 888a4de8253c36b3e35abd8d08c97ab1 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.428 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 JV59_35480 888a4de8253c36b3e35abd8d08c97ab1 290 PIRSF PIRSF001553 1 289 4.1E-135 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 JV59_39320 30347aa8b23de4532dadaca90a213dae 156 Gene3D G3DSA:1.20.5.620 62 122 2.0E-22 T 14-10-2018 JV59_39320 30347aa8b23de4532dadaca90a213dae 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 7.3E-36 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 JV59_39320 30347aa8b23de4532dadaca90a213dae 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.471 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 JV59_39320 30347aa8b23de4532dadaca90a213dae 156 SUPERFAMILY SSF81573 63 121 5.49E-14 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily JV59_39320 30347aa8b23de4532dadaca90a213dae 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 7.0E-60 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 JV59_34875 3d991654fc8a4eeb1c9bb91e1725a303 187 SUPERFAMILY SSF88659 117 176 1.21E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JV59_34875 3d991654fc8a4eeb1c9bb91e1725a303 187 Pfam PF08281 Sigma-70, region 4 119 171 3.2E-11 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JV59_34875 3d991654fc8a4eeb1c9bb91e1725a303 187 Gene3D G3DSA:1.10.10.10 114 177 1.2E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_34875 3d991654fc8a4eeb1c9bb91e1725a303 187 SUPERFAMILY SSF88946 23 104 1.86E-21 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JV59_34875 3d991654fc8a4eeb1c9bb91e1725a303 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 51 82 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JV59_34875 3d991654fc8a4eeb1c9bb91e1725a303 187 Gene3D G3DSA:1.10.1740.10 10 91 5.5E-19 T 14-10-2018 JV59_34875 3d991654fc8a4eeb1c9bb91e1725a303 187 Pfam PF04542 Sigma-70 region 2 29 95 2.0E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JV59_34875 3d991654fc8a4eeb1c9bb91e1725a303 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 175 1.4E-23 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JV59_17220 fb6fd8f05707de99b94477b48b4cf8a6 182 Gene3D G3DSA:1.20.58.320 1 81 2.4E-27 T 14-10-2018 JV59_17220 fb6fd8f05707de99b94477b48b4cf8a6 182 SUPERFAMILY SSF48452 3 178 1.06E-70 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_17220 fb6fd8f05707de99b94477b48b4cf8a6 182 Gene3D G3DSA:1.25.40.10 82 182 4.2E-34 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_17220 fb6fd8f05707de99b94477b48b4cf8a6 182 Pfam PF06041 Bacterial protein of unknown function (DUF924) 9 179 2.9E-63 T 14-10-2018 IPR010323 Protein of unknown function DUF924 JV59_26755 7b04fb261e3305a98927ad938be8399c 194 Pfam PF04545 Sigma-70, region 4 139 187 6.7E-14 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 JV59_26755 7b04fb261e3305a98927ad938be8399c 194 Pfam PF04542 Sigma-70 region 2 33 99 5.5E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JV59_26755 7b04fb261e3305a98927ad938be8399c 194 Gene3D G3DSA:1.10.10.10 98 192 2.3E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_26755 7b04fb261e3305a98927ad938be8399c 194 SUPERFAMILY SSF88946 10 118 9.02E-24 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JV59_26755 7b04fb261e3305a98927ad938be8399c 194 SUPERFAMILY SSF88659 127 189 2.8E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JV59_26755 7b04fb261e3305a98927ad938be8399c 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 187 8.6E-28 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JV59_26755 7b04fb261e3305a98927ad938be8399c 194 Gene3D G3DSA:1.10.1740.10 15 96 7.1E-23 T 14-10-2018 JV59_23740 c3ba7b2b522c972c2655e13136595dc2 576 SMART SM00052 356 576 1.0E-12 T 14-10-2018 IPR001633 EAL domain JV59_23740 c3ba7b2b522c972c2655e13136595dc2 576 SUPERFAMILY SSF141868 371 576 6.67E-39 T 14-10-2018 IPR035919 EAL domain superfamily JV59_23740 c3ba7b2b522c972c2655e13136595dc2 576 Pfam PF00563 EAL domain 368 576 1.4E-31 T 14-10-2018 IPR001633 EAL domain JV59_23740 c3ba7b2b522c972c2655e13136595dc2 576 Gene3D G3DSA:3.20.20.450 354 576 2.4E-40 T 14-10-2018 IPR035919 EAL domain superfamily JV59_24030 2a637f890a905b48f47d3735317c8ac8 842 Gene3D G3DSA:3.10.50.10 466 551 7.2E-174 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily JV59_24030 2a637f890a905b48f47d3735317c8ac8 842 SUPERFAMILY SSF51445 135 588 2.22E-90 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_24030 2a637f890a905b48f47d3735317c8ac8 842 Gene3D G3DSA:2.60.40.10 693 782 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_24030 2a637f890a905b48f47d3735317c8ac8 842 Gene3D G3DSA:2.60.40.10 22 132 6.4E-45 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_24030 2a637f890a905b48f47d3735317c8ac8 842 SUPERFAMILY SSF51055 790 838 1.57E-14 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_24030 2a637f890a905b48f47d3735317c8ac8 842 SUPERFAMILY SSF49299 594 686 1.73E-7 T 14-10-2018 IPR035986 PKD domain superfamily JV59_24030 2a637f890a905b48f47d3735317c8ac8 842 ProSitePatterns PS01095 Chitinases family 18 active site. 307 315 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 JV59_24030 2a637f890a905b48f47d3735317c8ac8 842 SUPERFAMILY SSF54556 461 546 9.83E-17 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily JV59_24030 2a637f890a905b48f47d3735317c8ac8 842 SMART SM00636 159 575 1.5E-158 T 14-10-2018 IPR011583 Chitinase II GO:0008061 JV59_24030 2a637f890a905b48f47d3735317c8ac8 842 Pfam PF00704 Glycosyl hydrolases family 18 161 575 3.0E-88 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 JV59_24030 2a637f890a905b48f47d3735317c8ac8 842 SMART SM00495 792 837 2.7E-13 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_24030 2a637f890a905b48f47d3735317c8ac8 842 SUPERFAMILY SSF49299 694 781 4.12E-6 T 14-10-2018 IPR035986 PKD domain superfamily JV59_24030 2a637f890a905b48f47d3735317c8ac8 842 SUPERFAMILY SSF81296 21 133 6.58E-34 T 14-10-2018 IPR014756 Immunoglobulin E-set JV59_24030 2a637f890a905b48f47d3735317c8ac8 842 Gene3D G3DSA:2.10.10.20 792 835 9.3E-17 T 14-10-2018 JV59_24030 2a637f890a905b48f47d3735317c8ac8 842 Gene3D G3DSA:3.20.20.80 162 577 7.2E-174 T 14-10-2018 JV59_24030 2a637f890a905b48f47d3735317c8ac8 842 SMART SM00089 698 784 0.061 T 14-10-2018 IPR022409 PKD/Chitinase domain JV59_24030 2a637f890a905b48f47d3735317c8ac8 842 SMART SM00089 598 688 4.9E-5 T 14-10-2018 IPR022409 PKD/Chitinase domain JV59_24030 2a637f890a905b48f47d3735317c8ac8 842 SMART SM00089 33 134 0.011 T 14-10-2018 IPR022409 PKD/Chitinase domain JV59_24030 2a637f890a905b48f47d3735317c8ac8 842 Gene3D G3DSA:2.60.40.10 595 692 9.9E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_24030 2a637f890a905b48f47d3735317c8ac8 842 Pfam PF08329 Chitinase A, N-terminal domain 20 156 1.1E-54 T 14-10-2018 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 JV59_16545 ab5464b379ff7603d8cbcab2f0e1982b 404 Pfam PF13229 Right handed beta helix region 147 314 1.7E-9 T 14-10-2018 IPR039448 Right handed beta helix domain JV59_16545 ab5464b379ff7603d8cbcab2f0e1982b 404 SUPERFAMILY SSF51126 19 396 1.19E-38 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor JV59_16545 ab5464b379ff7603d8cbcab2f0e1982b 404 Pfam PF12708 Pectate lyase superfamily protein 45 122 2.0E-7 T 14-10-2018 IPR024535 Pectate lyase superfamily protein JV59_16545 ab5464b379ff7603d8cbcab2f0e1982b 404 SMART SM00710 121 152 3100.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JV59_16545 ab5464b379ff7603d8cbcab2f0e1982b 404 SMART SM00710 324 364 5900.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JV59_16545 ab5464b379ff7603d8cbcab2f0e1982b 404 SMART SM00710 292 313 240.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JV59_16545 ab5464b379ff7603d8cbcab2f0e1982b 404 SMART SM00710 237 259 2200.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JV59_16545 ab5464b379ff7603d8cbcab2f0e1982b 404 SMART SM00710 184 221 8700.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JV59_16545 ab5464b379ff7603d8cbcab2f0e1982b 404 SMART SM00710 153 175 21.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat JV59_16545 ab5464b379ff7603d8cbcab2f0e1982b 404 Gene3D G3DSA:2.160.20.10 44 404 4.6E-34 T 14-10-2018 IPR012334 Pectin lyase fold JV59_39925 f5df7e49881a070ab9eb3ca59b300ebd 237 SUPERFAMILY SSF52343 104 235 4.06E-35 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JV59_39925 f5df7e49881a070ab9eb3ca59b300ebd 237 Pfam PF00175 Oxidoreductase NAD-binding domain 112 215 2.4E-21 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 JV59_39925 f5df7e49881a070ab9eb3ca59b300ebd 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 5.5E-13 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JV59_39925 f5df7e49881a070ab9eb3ca59b300ebd 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 5.5E-13 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JV59_39925 f5df7e49881a070ab9eb3ca59b300ebd 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 145 5.5E-13 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JV59_39925 f5df7e49881a070ab9eb3ca59b300ebd 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 95 104 5.5E-13 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JV59_39925 f5df7e49881a070ab9eb3ca59b300ebd 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 5.5E-13 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JV59_39925 f5df7e49881a070ab9eb3ca59b300ebd 237 SUPERFAMILY SSF63380 2 101 7.38E-17 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JV59_39925 f5df7e49881a070ab9eb3ca59b300ebd 237 Gene3D G3DSA:2.40.30.10 1 102 1.8E-21 T 14-10-2018 JV59_39925 f5df7e49881a070ab9eb3ca59b300ebd 237 Gene3D G3DSA:3.40.50.80 103 237 9.0E-31 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JV59_31040 cf554caa60e9dad49030f99f5971cbcd 245 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 55.281 T 14-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 JV59_31040 cf554caa60e9dad49030f99f5971cbcd 245 Gene3D G3DSA:3.40.50.1220 8 225 5.1E-79 T 14-10-2018 JV59_31040 cf554caa60e9dad49030f99f5971cbcd 245 SUPERFAMILY SSF52467 6 234 2.51E-69 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JV59_31040 cf554caa60e9dad49030f99f5971cbcd 245 Pfam PF02146 Sir2 family 13 186 2.5E-49 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 JV59_31040 cf554caa60e9dad49030f99f5971cbcd 245 Gene3D G3DSA:3.30.1600.10 22 158 5.1E-79 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily JV59_18040 4053dabc4f00e2286f3e80c9d2e5189d 467 SUPERFAMILY SSF51905 30 404 4.26E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_18040 4053dabc4f00e2286f3e80c9d2e5189d 467 Gene3D G3DSA:3.30.9.10 125 355 3.1E-62 T 14-10-2018 JV59_18040 4053dabc4f00e2286f3e80c9d2e5189d 467 TIGRFAM TIGR03329 Phn_aa_oxid: putative aminophosphonate oxidoreductase 6 465 6.4E-237 T 14-10-2018 IPR017715 Putative aminophosphonate oxidoreductase JV59_18040 4053dabc4f00e2286f3e80c9d2e5189d 467 Pfam PF01266 FAD dependent oxidoreductase 31 394 2.4E-48 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JV59_18040 4053dabc4f00e2286f3e80c9d2e5189d 467 Gene3D G3DSA:3.50.50.60 31 396 3.1E-62 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_35665 e80b18884a05564a4872d4d19989635c 63 Pfam PF14056 Domain of unknown function (DUF4250) 9 62 4.2E-21 T 14-10-2018 IPR025346 Protein of unknown function DUF4250 JV59_26205 b992881104cae6695ef650c07e2691b3 66 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 64 7.0E-22 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 JV59_26205 b992881104cae6695ef650c07e2691b3 66 Pfam PF06526 Protein of unknown function (DUF1107) 2 63 9.1E-27 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 JV59_26205 b992881104cae6695ef650c07e2691b3 66 Gene3D G3DSA:3.30.1910.10 2 64 2.0E-20 T 14-10-2018 JV59_38000 4d29ec1a83ac9f7ab8f49c7e0ce541a2 263 Gene3D G3DSA:3.10.180.50 2 239 6.7E-93 T 14-10-2018 JV59_38000 4d29ec1a83ac9f7ab8f49c7e0ce541a2 263 SMART SM01150 3 262 1.2E-115 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 JV59_38000 4d29ec1a83ac9f7ab8f49c7e0ce541a2 263 Pfam PF07063 Domain of unknown function (DUF1338) 31 261 1.2E-47 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 JV59_36910 5939711a56dc09f36224bc4d3f3e1378 739 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 7.3E-36 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 JV59_36910 5939711a56dc09f36224bc4d3f3e1378 739 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 737 6.1E-187 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 JV59_36910 5939711a56dc09f36224bc4d3f3e1378 739 Pfam PF13291 ACT domain 661 737 6.3E-16 T 14-10-2018 IPR002912 ACT domain JV59_36910 5939711a56dc09f36224bc4d3f3e1378 739 Gene3D G3DSA:3.30.460.10 208 340 2.0E-48 T 14-10-2018 JV59_36910 5939711a56dc09f36224bc4d3f3e1378 739 Pfam PF02824 TGS domain 402 461 3.6E-21 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 JV59_36910 5939711a56dc09f36224bc4d3f3e1378 739 SMART SM00954 250 360 2.9E-64 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 JV59_36910 5939711a56dc09f36224bc4d3f3e1378 739 SUPERFAMILY SSF81271 395 461 2.4E-20 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 JV59_36910 5939711a56dc09f36224bc4d3f3e1378 739 SUPERFAMILY SSF81301 195 406 1.8E-62 T 14-10-2018 JV59_36910 5939711a56dc09f36224bc4d3f3e1378 739 SUPERFAMILY SSF109604 50 205 3.77E-44 T 14-10-2018 JV59_36910 5939711a56dc09f36224bc4d3f3e1378 739 Pfam PF13328 HD domain 48 190 1.0E-38 T 14-10-2018 IPR003607 HD/PDEase domain JV59_36910 5939711a56dc09f36224bc4d3f3e1378 739 Gene3D G3DSA:1.10.3210.10 25 205 1.9E-38 T 14-10-2018 JV59_36910 5939711a56dc09f36224bc4d3f3e1378 739 Gene3D G3DSA:3.30.70.260 660 739 2.9E-15 T 14-10-2018 JV59_36910 5939711a56dc09f36224bc4d3f3e1378 739 Gene3D G3DSA:3.10.20.30 396 469 2.1E-30 T 14-10-2018 IPR012675 Beta-grasp domain superfamily JV59_36910 5939711a56dc09f36224bc4d3f3e1378 739 SUPERFAMILY SSF55021 662 737 5.95E-10 T 14-10-2018 JV59_39990 8a80b4fe8682d3d1ccea9b5eb313c683 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 6.5E-101 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 JV59_39990 8a80b4fe8682d3d1ccea9b5eb313c683 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.47 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 JV59_39990 8a80b4fe8682d3d1ccea9b5eb313c683 276 SUPERFAMILY SSF54506 2 274 1.14E-50 T 14-10-2018 JV59_39990 8a80b4fe8682d3d1ccea9b5eb313c683 276 Pfam PF01678 Diaminopimelate epimerase 5 125 2.2E-33 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 JV59_39990 8a80b4fe8682d3d1ccea9b5eb313c683 276 Pfam PF01678 Diaminopimelate epimerase 154 269 1.5E-30 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 JV59_39990 8a80b4fe8682d3d1ccea9b5eb313c683 276 Gene3D G3DSA:3.10.310.10 117 263 1.7E-105 T 14-10-2018 JV59_39990 8a80b4fe8682d3d1ccea9b5eb313c683 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 JV59_39990 8a80b4fe8682d3d1ccea9b5eb313c683 276 Gene3D G3DSA:3.10.310.10 5 272 1.7E-105 T 14-10-2018 JV59_32575 bbdd13ec93aa730febd5eb9f21138b38 368 SUPERFAMILY SSF55031 179 289 5.5E-21 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain JV59_32575 bbdd13ec93aa730febd5eb9f21138b38 368 PIRSF PIRSF001123 295 368 0.001 T 14-10-2018 IPR008007 Peptidase M42 JV59_32575 bbdd13ec93aa730febd5eb9f21138b38 368 PIRSF PIRSF001123 100 185 4.9E-4 T 14-10-2018 IPR008007 Peptidase M42 JV59_32575 bbdd13ec93aa730febd5eb9f21138b38 368 PIRSF PIRSF001123 6 105 0.53 T 14-10-2018 IPR008007 Peptidase M42 JV59_32575 bbdd13ec93aa730febd5eb9f21138b38 368 SUPERFAMILY SSF53187 7 367 4.28E-59 T 14-10-2018 JV59_32575 bbdd13ec93aa730febd5eb9f21138b38 368 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 8 365 7.3E-156 T 14-10-2018 IPR010162 Peptidase M20B, peptidase T-like JV59_32575 bbdd13ec93aa730febd5eb9f21138b38 368 Pfam PF01546 Peptidase family M20/M25/M40 73 367 5.0E-19 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 JV59_32575 bbdd13ec93aa730febd5eb9f21138b38 368 Pfam PF07687 Peptidase dimerisation domain 183 270 3.0E-14 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain JV59_32575 bbdd13ec93aa730febd5eb9f21138b38 368 Gene3D G3DSA:3.30.70.360 176 287 1.8E-111 T 14-10-2018 JV59_32575 bbdd13ec93aa730febd5eb9f21138b38 368 Gene3D G3DSA:3.40.630.10 16 362 1.8E-111 T 14-10-2018 JV59_35985 3addb0fa319ead4b8b9bcdb392a4db3c 699 Gene3D G3DSA:3.40.50.300 573 689 2.3E-20 T 14-10-2018 JV59_35985 3addb0fa319ead4b8b9bcdb392a4db3c 699 Pfam PF13604 AAA domain 233 395 6.1E-30 T 14-10-2018 JV59_35985 3addb0fa319ead4b8b9bcdb392a4db3c 699 Gene3D G3DSA:3.40.50.300 445 569 3.6E-24 T 14-10-2018 JV59_35985 3addb0fa319ead4b8b9bcdb392a4db3c 699 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 9 699 1.2E-211 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 JV59_35985 3addb0fa319ead4b8b9bcdb392a4db3c 699 Pfam PF13538 UvrD-like helicase C-terminal domain 628 674 5.7E-15 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain JV59_35985 3addb0fa319ead4b8b9bcdb392a4db3c 699 Gene3D G3DSA:3.40.50.300 201 435 7.4E-73 T 14-10-2018 JV59_35985 3addb0fa319ead4b8b9bcdb392a4db3c 699 SUPERFAMILY SSF52540 10 440 1.09E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_35985 3addb0fa319ead4b8b9bcdb392a4db3c 699 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 17 697 49.558 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 JV59_35985 3addb0fa319ead4b8b9bcdb392a4db3c 699 Gene3D G3DSA:1.10.10.1020 3 119 7.9E-24 T 14-10-2018 JV59_35985 3addb0fa319ead4b8b9bcdb392a4db3c 699 SUPERFAMILY SSF52540 360 698 7.73E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_27570 62541a5d3b2f45d6a029c848a6d473f9 180 Pfam PF13740 ACT domain 3 78 6.3E-24 T 14-10-2018 JV59_27570 62541a5d3b2f45d6a029c848a6d473f9 180 SUPERFAMILY SSF55021 90 176 1.83E-20 T 14-10-2018 JV59_27570 62541a5d3b2f45d6a029c848a6d473f9 180 Gene3D G3DSA:3.30.70.260 1 85 1.8E-24 T 14-10-2018 JV59_27570 62541a5d3b2f45d6a029c848a6d473f9 180 PIRSF PIRSF028103 1 178 6.7E-62 T 14-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 JV59_27570 62541a5d3b2f45d6a029c848a6d473f9 180 SUPERFAMILY SSF55021 1 83 1.55E-16 T 14-10-2018 JV59_27570 62541a5d3b2f45d6a029c848a6d473f9 180 Gene3D G3DSA:3.30.70.260 87 180 8.9E-40 T 14-10-2018 JV59_22785 fc11f5c98f9cdbb2f3ac64ce7bb66e16 314 Pfam PF00294 pfkB family carbohydrate kinase 8 307 1.8E-46 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB JV59_22785 fc11f5c98f9cdbb2f3ac64ce7bb66e16 314 SUPERFAMILY SSF53613 6 305 7.02E-63 T 14-10-2018 IPR029056 Ribokinase-like JV59_22785 fc11f5c98f9cdbb2f3ac64ce7bb66e16 314 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 260 273 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 JV59_22785 fc11f5c98f9cdbb2f3ac64ce7bb66e16 314 Gene3D G3DSA:3.40.1190.20 5 313 1.4E-64 T 14-10-2018 IPR029056 Ribokinase-like JV59_26090 4b694f725c7d55ed548c17ead71240c4 240 Pfam PF13309 HTH domain 174 231 1.8E-18 T 14-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain JV59_26090 4b694f725c7d55ed548c17ead71240c4 240 Pfam PF08348 YheO-like PAS domain 31 139 9.9E-36 T 14-10-2018 IPR013559 YheO-like JV59_26090 4b694f725c7d55ed548c17ead71240c4 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 30 143 2.0E-61 T 14-10-2018 IPR013559 YheO-like JV59_27800 50b08c1474e488a510e106c1d00591e0 122 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 45 114 8.6E-20 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) JV59_27800 50b08c1474e488a510e106c1d00591e0 122 SUPERFAMILY SSF101801 40 115 2.62E-19 T 14-10-2018 IPR036429 SpoA-like superfamily JV59_27800 50b08c1474e488a510e106c1d00591e0 122 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 41 115 2.0E-29 T 14-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 JV59_27800 50b08c1474e488a510e106c1d00591e0 122 Gene3D G3DSA:2.30.330.10 31 120 1.2E-24 T 14-10-2018 IPR036429 SpoA-like superfamily JV59_27800 50b08c1474e488a510e106c1d00591e0 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 43 59 1.8E-18 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 JV59_27800 50b08c1474e488a510e106c1d00591e0 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 60 76 1.8E-18 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 JV59_27800 50b08c1474e488a510e106c1d00591e0 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 76 89 1.8E-18 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 JV59_27800 50b08c1474e488a510e106c1d00591e0 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 104 1.8E-18 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 JV59_33185 46133dd67b87f6664116e0fde230def8 573 Gene3D G3DSA:1.20.1560.10 1 321 9.6E-24 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_33185 46133dd67b87f6664116e0fde230def8 573 SUPERFAMILY SSF52540 334 571 1.16E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_33185 46133dd67b87f6664116e0fde230def8 573 Pfam PF00005 ABC transporter 356 502 1.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_33185 46133dd67b87f6664116e0fde230def8 573 Pfam PF00664 ABC transporter transmembrane region 26 285 1.5E-7 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JV59_33185 46133dd67b87f6664116e0fde230def8 573 SUPERFAMILY SSF90123 7 323 8.5E-39 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_33185 46133dd67b87f6664116e0fde230def8 573 SMART SM00382 365 551 1.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_33185 46133dd67b87f6664116e0fde230def8 573 Gene3D G3DSA:3.40.50.300 325 572 7.7E-77 T 14-10-2018 JV59_33185 46133dd67b87f6664116e0fde230def8 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_33185 46133dd67b87f6664116e0fde230def8 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 7 532 7.8E-134 T 14-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 JV59_18435 f3eb471f480ca77bee796342b09f0a24 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 5.1E-50 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JV59_18435 f3eb471f480ca77bee796342b09f0a24 384 SUPERFAMILY SSF56645 1 240 1.01E-79 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JV59_18435 f3eb471f480ca77bee796342b09f0a24 384 Gene3D G3DSA:1.20.140.10 232 382 3.1E-53 T 14-10-2018 JV59_18435 f3eb471f480ca77bee796342b09f0a24 384 PIRSF PIRSF016578 3 382 4.3E-24 T 14-10-2018 JV59_18435 f3eb471f480ca77bee796342b09f0a24 384 Gene3D G3DSA:1.10.540.10 1 117 5.2E-35 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JV59_18435 f3eb471f480ca77bee796342b09f0a24 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JV59_18435 f3eb471f480ca77bee796342b09f0a24 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JV59_18435 f3eb471f480ca77bee796342b09f0a24 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 6.4E-26 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JV59_18435 f3eb471f480ca77bee796342b09f0a24 384 SUPERFAMILY SSF47203 226 379 7.89E-59 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JV59_18435 f3eb471f480ca77bee796342b09f0a24 384 Gene3D G3DSA:2.40.110.10 121 231 1.5E-41 T 14-10-2018 JV59_18435 f3eb471f480ca77bee796342b09f0a24 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 4.1E-28 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JV59_22025 8c6999c09e39c24139f0b7b59f25a40c 873 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 385 641 2.4E-13 T 14-10-2018 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0004559|GO:0006013 JV59_22025 8c6999c09e39c24139f0b7b59f25a40c 873 Gene3D G3DSA:3.20.110.10 1 274 2.3E-91 T 14-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily JV59_22025 8c6999c09e39c24139f0b7b59f25a40c 873 SMART SM00872 277 355 2.2E-4 T 14-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 JV59_22025 8c6999c09e39c24139f0b7b59f25a40c 873 SUPERFAMILY SSF88688 286 375 4.9E-6 T 14-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily JV59_22025 8c6999c09e39c24139f0b7b59f25a40c 873 Gene3D G3DSA:2.70.98.30 476 758 1.3E-55 T 14-10-2018 JV59_22025 8c6999c09e39c24139f0b7b59f25a40c 873 SUPERFAMILY SSF88713 1 270 1.33E-50 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 JV59_22025 8c6999c09e39c24139f0b7b59f25a40c 873 Pfam PF09261 Alpha mannosidase middle domain 284 354 6.3E-5 T 14-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 JV59_22025 8c6999c09e39c24139f0b7b59f25a40c 873 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 3 265 5.2E-39 T 14-10-2018 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0006013 JV59_22025 8c6999c09e39c24139f0b7b59f25a40c 873 SUPERFAMILY SSF74650 365 858 1.66E-44 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 JV59_22025 8c6999c09e39c24139f0b7b59f25a40c 873 Gene3D G3DSA:1.20.1270.50 281 378 2.9E-23 T 14-10-2018 IPR037094 Glycoside hydrolase family 38, central domain superfamily GO:0004559|GO:0006013 JV59_30495 3a8b14a21dbfee919d42e664709e6cbe 303 PIRSF PIRSF001522 1 303 5.7E-111 T 14-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 JV59_30495 3a8b14a21dbfee919d42e664709e6cbe 303 Gene3D G3DSA:2.40.128.90 16 303 1.5E-99 T 14-10-2018 JV59_30495 3a8b14a21dbfee919d42e664709e6cbe 303 PRINTS PR00482 Omptin serine protease signature 135 162 5.1E-43 T 14-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 JV59_30495 3a8b14a21dbfee919d42e664709e6cbe 303 PRINTS PR00482 Omptin serine protease signature 199 220 5.1E-43 T 14-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 JV59_30495 3a8b14a21dbfee919d42e664709e6cbe 303 PRINTS PR00482 Omptin serine protease signature 247 267 5.1E-43 T 14-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 JV59_30495 3a8b14a21dbfee919d42e664709e6cbe 303 PRINTS PR00482 Omptin serine protease signature 226 246 5.1E-43 T 14-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 JV59_30495 3a8b14a21dbfee919d42e664709e6cbe 303 PRINTS PR00482 Omptin serine protease signature 30 44 5.1E-43 T 14-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 JV59_30495 3a8b14a21dbfee919d42e664709e6cbe 303 PRINTS PR00482 Omptin serine protease signature 75 100 5.1E-43 T 14-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 JV59_30495 3a8b14a21dbfee919d42e664709e6cbe 303 PRINTS PR00482 Omptin serine protease signature 177 198 5.1E-43 T 14-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 JV59_30495 3a8b14a21dbfee919d42e664709e6cbe 303 PRINTS PR00482 Omptin serine protease signature 107 134 5.1E-43 T 14-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 JV59_30495 3a8b14a21dbfee919d42e664709e6cbe 303 SUPERFAMILY SSF69917 17 303 1.7E-87 T 14-10-2018 IPR020080 Outer membrane adhesin/peptidase omptin GO:0004190 JV59_30495 3a8b14a21dbfee919d42e664709e6cbe 303 Pfam PF01278 Omptin family 24 303 4.5E-104 T 14-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 JV59_37580 80b4c80dadbb3dc926513c4b35d15499 334 PIRSF PIRSF006621 3 331 1.1E-75 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 JV59_37580 80b4c80dadbb3dc926513c4b35d15499 334 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 95 113 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 JV59_37580 80b4c80dadbb3dc926513c4b35d15499 334 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 13 328 1.2E-160 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 JV59_37580 80b4c80dadbb3dc926513c4b35d15499 334 Gene3D G3DSA:3.20.20.70 11 253 3.0E-73 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_37580 80b4c80dadbb3dc926513c4b35d15499 334 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 9 330 53.294 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 JV59_37580 80b4c80dadbb3dc926513c4b35d15499 334 Pfam PF01207 Dihydrouridine synthase (Dus) 17 325 5.7E-94 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 JV59_37580 80b4c80dadbb3dc926513c4b35d15499 334 Gene3D G3DSA:1.20.120.1460 254 333 9.0E-24 T 14-10-2018 JV59_37580 80b4c80dadbb3dc926513c4b35d15499 334 SUPERFAMILY SSF51395 13 326 2.44E-76 T 14-10-2018 JV59_30420 af953342960e7c6853ee07b87c32bd8d 226 SMART SM00448 5 118 1.6E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_30420 af953342960e7c6853ee07b87c32bd8d 226 Gene3D G3DSA:3.40.50.2300 3 148 1.7E-28 T 14-10-2018 JV59_30420 af953342960e7c6853ee07b87c32bd8d 226 Pfam PF12431 Transcriptional regulator 134 162 3.6E-8 T 14-10-2018 IPR028141 Transcriptional regulator JV59_30420 af953342960e7c6853ee07b87c32bd8d 226 PIRSF PIRSF006171 3 226 6.7E-81 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 JV59_30420 af953342960e7c6853ee07b87c32bd8d 226 SUPERFAMILY SSF52172 6 131 2.28E-32 T 14-10-2018 IPR011006 CheY-like superfamily JV59_30420 af953342960e7c6853ee07b87c32bd8d 226 Pfam PF00072 Response regulator receiver domain 7 118 1.9E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_16005 84fb778052d265b192e0fc0330e6e42e 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 4.1E-10 T 14-10-2018 IPR002220 DapA-like GO:0016829 JV59_16005 84fb778052d265b192e0fc0330e6e42e 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 4.1E-10 T 14-10-2018 IPR002220 DapA-like GO:0016829 JV59_16005 84fb778052d265b192e0fc0330e6e42e 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 4.1E-10 T 14-10-2018 IPR002220 DapA-like GO:0016829 JV59_16005 84fb778052d265b192e0fc0330e6e42e 304 PIRSF PIRSF001365 1 301 3.4E-85 T 14-10-2018 IPR002220 DapA-like GO:0016829 JV59_16005 84fb778052d265b192e0fc0330e6e42e 304 Gene3D G3DSA:3.20.20.70 1 296 5.2E-87 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_16005 84fb778052d265b192e0fc0330e6e42e 304 SMART SM01130 4 293 6.1E-95 T 14-10-2018 IPR002220 DapA-like GO:0016829 JV59_16005 84fb778052d265b192e0fc0330e6e42e 304 Pfam PF00701 Dihydrodipicolinate synthetase family 6 291 2.0E-60 T 14-10-2018 IPR002220 DapA-like GO:0016829 JV59_16005 84fb778052d265b192e0fc0330e6e42e 304 SUPERFAMILY SSF51569 4 291 9.52E-85 T 14-10-2018 JV59_24285 9bbbd890f0381f90406c208ae3548a35 104 SUPERFAMILY SSF47413 28 90 4.83E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_24285 9bbbd890f0381f90406c208ae3548a35 104 Gene3D G3DSA:1.10.260.40 10 92 3.7E-13 T 14-10-2018 JV59_24285 9bbbd890f0381f90406c208ae3548a35 104 SMART SM00530 35 90 2.0E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_24285 9bbbd890f0381f90406c208ae3548a35 104 Pfam PF01381 Helix-turn-helix 36 86 3.7E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_32865 865198ca2167261ada685df61ed20636 296 TIGRFAM TIGR00688 rarD: protein RarD 7 259 6.0E-45 T 14-10-2018 IPR004626 RarD protein GO:0005887 JV59_32865 865198ca2167261ada685df61ed20636 296 Pfam PF00892 EamA-like transporter family 152 283 1.3E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_32865 865198ca2167261ada685df61ed20636 296 Pfam PF00892 EamA-like transporter family 7 140 7.4E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_32865 865198ca2167261ada685df61ed20636 296 SUPERFAMILY SSF103481 207 284 4.05E-10 T 14-10-2018 JV59_32865 865198ca2167261ada685df61ed20636 296 SUPERFAMILY SSF103481 44 141 3.4E-9 T 14-10-2018 JV59_00390 759a9c2a3d21aae6f9de58030530f668 397 PRINTS PR00721 Stomatin signature 93 115 9.0E-7 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JV59_00390 759a9c2a3d21aae6f9de58030530f668 397 PRINTS PR00721 Stomatin signature 140 161 9.0E-7 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JV59_00390 759a9c2a3d21aae6f9de58030530f668 397 PRINTS PR00721 Stomatin signature 196 219 9.0E-7 T 14-10-2018 IPR001972 Stomatin family GO:0016020 JV59_00390 759a9c2a3d21aae6f9de58030530f668 397 Pfam PF12221 Bacterial membrane protein N terminal 1 56 1.6E-15 T 14-10-2018 IPR020980 Menbrane protein HflK, N-terminal JV59_00390 759a9c2a3d21aae6f9de58030530f668 397 SUPERFAMILY SSF117892 119 251 9.15E-22 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily JV59_00390 759a9c2a3d21aae6f9de58030530f668 397 TIGRFAM TIGR01933 hflK: HflK protein 88 348 3.6E-121 T 14-10-2018 IPR010201 HflK GO:0016021 JV59_00390 759a9c2a3d21aae6f9de58030530f668 397 Pfam PF01145 SPFH domain / Band 7 family 90 261 2.1E-30 T 14-10-2018 IPR001107 Band 7 domain JV59_00390 759a9c2a3d21aae6f9de58030530f668 397 SMART SM00244 86 246 4.4E-52 T 14-10-2018 IPR001107 Band 7 domain JV59_00390 759a9c2a3d21aae6f9de58030530f668 397 Gene3D G3DSA:3.30.479.30 116 248 9.3E-22 T 14-10-2018 JV59_35100 58383aea4f056e7a594cec383b67cec1 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 4.9E-45 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal JV59_35100 58383aea4f056e7a594cec383b67cec1 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 2.2E-27 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal JV59_35100 58383aea4f056e7a594cec383b67cec1 403 Gene3D G3DSA:3.40.47.10 258 401 8.7E-50 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_35100 58383aea4f056e7a594cec383b67cec1 403 Gene3D G3DSA:3.40.47.10 6 257 5.7E-69 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_35100 58383aea4f056e7a594cec383b67cec1 403 SMART SM00825 Beta-ketoacyl synthase 4 403 2.7E-14 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JV59_35100 58383aea4f056e7a594cec383b67cec1 403 SUPERFAMILY SSF53901 213 401 2.31E-62 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_35100 58383aea4f056e7a594cec383b67cec1 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site JV59_35100 58383aea4f056e7a594cec383b67cec1 403 SUPERFAMILY SSF53901 1 251 6.37E-67 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_00065 f014f97d9e45276d25bdb50494d584c4 185 Pfam PF05137 Fimbrial assembly protein (PilN) 105 178 1.8E-10 T 14-10-2018 IPR007813 Fimbrial assembly PilN JV59_23460 12865460c3b5aab6018967a9e9d723af 369 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 52 1.2E-9 T 14-10-2018 JV59_23460 12865460c3b5aab6018967a9e9d723af 369 Gene3D G3DSA:1.10.10.10 6 71 6.3E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_23460 12865460c3b5aab6018967a9e9d723af 369 Gene3D G3DSA:3.30.420.40 199 312 7.3E-39 T 14-10-2018 JV59_23460 12865460c3b5aab6018967a9e9d723af 369 SUPERFAMILY SSF46785 7 70 2.41E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_23460 12865460c3b5aab6018967a9e9d723af 369 SUPERFAMILY SSF53067 76 363 3.07E-31 T 14-10-2018 JV59_23460 12865460c3b5aab6018967a9e9d723af 369 Gene3D G3DSA:3.30.420.40 76 198 7.3E-39 T 14-10-2018 JV59_23460 12865460c3b5aab6018967a9e9d723af 369 Pfam PF00480 ROK family 79 359 3.3E-27 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 JV59_21625 84ca2f1964e8b8ffa07e8678e2499ec1 165 SUPERFAMILY SSF55729 3 161 2.4E-36 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_21625 84ca2f1964e8b8ffa07e8678e2499ec1 165 Pfam PF00583 Acetyltransferase (GNAT) family 45 136 4.8E-16 T 14-10-2018 IPR000182 GNAT domain JV59_21625 84ca2f1964e8b8ffa07e8678e2499ec1 165 Gene3D G3DSA:3.40.630.30 1 163 2.4E-41 T 14-10-2018 JV59_40155 bc96da35490b1f39ef0751a6bae10d95 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 7 283 1.8E-107 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 JV59_40155 bc96da35490b1f39ef0751a6bae10d95 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.798 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 JV59_40155 bc96da35490b1f39ef0751a6bae10d95 284 Pfam PF01040 UbiA prenyltransferase family 24 266 1.2E-68 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 JV59_40155 bc96da35490b1f39ef0751a6bae10d95 284 Gene3D G3DSA:1.10.357.140 19 176 4.0E-43 T 14-10-2018 JV59_01680 7f011ebbde5438c98d3801f6eef16b7d 359 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 76 273 9.0E-21 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JV59_01680 7f011ebbde5438c98d3801f6eef16b7d 359 Gene3D G3DSA:2.40.50.100 77 205 1.2E-50 T 14-10-2018 JV59_01680 7f011ebbde5438c98d3801f6eef16b7d 359 Gene3D G3DSA:1.10.287.470 112 171 1.2E-50 T 14-10-2018 JV59_01680 7f011ebbde5438c98d3801f6eef16b7d 359 Gene3D G3DSA:2.40.30.170 66 285 1.2E-50 T 14-10-2018 JV59_01680 7f011ebbde5438c98d3801f6eef16b7d 359 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 56 353 2.1E-46 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 JV59_01680 7f011ebbde5438c98d3801f6eef16b7d 359 Gene3D G3DSA:2.40.420.20 286 353 1.2E-50 T 14-10-2018 JV59_01680 7f011ebbde5438c98d3801f6eef16b7d 359 SUPERFAMILY SSF111369 67 281 3.53E-30 T 14-10-2018 JV59_34080 66cdf6ebc734f0cce875fbb3ec44d6f5 426 Pfam PF02687 FtsX-like permease family 322 420 1.6E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JV59_34080 66cdf6ebc734f0cce875fbb3ec44d6f5 426 Pfam PF12704 MacB-like periplasmic core domain 20 255 3.6E-27 T 14-10-2018 IPR025857 MacB-like periplasmic core domain JV59_23725 c5265f72c8035cc9bb18119493e91609 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 83 98 2.5E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_23725 c5265f72c8035cc9bb18119493e91609 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 98 114 2.5E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_23725 c5265f72c8035cc9bb18119493e91609 310 SUPERFAMILY SSF55136 142 306 4.71E-21 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily JV59_23725 c5265f72c8035cc9bb18119493e91609 310 Pfam PF12833 Helix-turn-helix domain 37 116 9.1E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_23725 c5265f72c8035cc9bb18119493e91609 310 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 68 110 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JV59_23725 c5265f72c8035cc9bb18119493e91609 310 SUPERFAMILY SSF46689 68 118 6.27E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_23725 c5265f72c8035cc9bb18119493e91609 310 SUPERFAMILY SSF46689 15 65 9.86E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_23725 c5265f72c8035cc9bb18119493e91609 310 Gene3D G3DSA:3.20.80.10 141 309 7.6E-28 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily JV59_23725 c5265f72c8035cc9bb18119493e91609 310 Gene3D G3DSA:1.10.10.60 69 127 1.0E-16 T 14-10-2018 JV59_23725 c5265f72c8035cc9bb18119493e91609 310 Pfam PF06445 GyrI-like small molecule binding domain 168 305 5.4E-17 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain JV59_23725 c5265f72c8035cc9bb18119493e91609 310 SMART SM00342 31 114 9.7E-31 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_23725 c5265f72c8035cc9bb18119493e91609 310 SMART SM00871 141 306 9.7E-19 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding JV59_23725 c5265f72c8035cc9bb18119493e91609 310 Gene3D G3DSA:1.10.10.60 7 68 7.3E-19 T 14-10-2018 JV59_39085 e2378e238509490df66e112bda9b9a78 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 9.4E-33 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 JV59_39085 e2378e238509490df66e112bda9b9a78 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 9.4E-33 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 JV59_39085 e2378e238509490df66e112bda9b9a78 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 9.4E-33 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 JV59_39085 e2378e238509490df66e112bda9b9a78 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 9.4E-33 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 JV59_39085 e2378e238509490df66e112bda9b9a78 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 9.4E-33 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 JV59_39085 e2378e238509490df66e112bda9b9a78 458 SUPERFAMILY SSF116726 148 226 2.62E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JV59_39085 e2378e238509490df66e112bda9b9a78 458 SUPERFAMILY SSF51735 1 151 5.37E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_39085 e2378e238509490df66e112bda9b9a78 458 Gene3D G3DSA:3.40.50.720 2 139 5.2E-51 T 14-10-2018 JV59_39085 e2378e238509490df66e112bda9b9a78 458 Pfam PF02254 TrkA-N domain 3 115 7.0E-28 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 JV59_39085 e2378e238509490df66e112bda9b9a78 458 Pfam PF02254 TrkA-N domain 235 350 6.1E-25 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 JV59_39085 e2378e238509490df66e112bda9b9a78 458 SUPERFAMILY SSF116726 375 437 4.45E-7 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JV59_39085 e2378e238509490df66e112bda9b9a78 458 Gene3D G3DSA:3.30.70.1450 367 458 2.8E-28 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JV59_39085 e2378e238509490df66e112bda9b9a78 458 SUPERFAMILY SSF51735 232 376 5.76E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_39085 e2378e238509490df66e112bda9b9a78 458 Pfam PF02080 TrkA-C domain 156 225 4.2E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JV59_39085 e2378e238509490df66e112bda9b9a78 458 Pfam PF02080 TrkA-C domain 391 449 3.0E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JV59_39085 e2378e238509490df66e112bda9b9a78 458 Gene3D G3DSA:3.40.50.720 233 366 7.1E-38 T 14-10-2018 JV59_39085 e2378e238509490df66e112bda9b9a78 458 Gene3D G3DSA:3.30.70.1450 140 232 1.5E-21 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JV59_19945 5da0bfa42f1cffa806271d6a768b2a95 545 Gene3D G3DSA:1.10.287.950 212 545 2.7E-70 T 14-10-2018 JV59_19945 5da0bfa42f1cffa806271d6a768b2a95 545 Gene3D G3DSA:3.30.450.20 36 189 3.1E-42 T 14-10-2018 JV59_19945 5da0bfa42f1cffa806271d6a768b2a95 545 SMART SM00304 213 267 3.1E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_19945 5da0bfa42f1cffa806271d6a768b2a95 545 Pfam PF00672 HAMP domain 214 263 1.2E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_19945 5da0bfa42f1cffa806271d6a768b2a95 545 SMART SM00283 282 543 2.2E-70 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_19945 5da0bfa42f1cffa806271d6a768b2a95 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 508 3.7E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_19945 5da0bfa42f1cffa806271d6a768b2a95 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 9 34 3.2E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_19945 5da0bfa42f1cffa806271d6a768b2a95 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 380 407 3.2E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_19945 5da0bfa42f1cffa806271d6a768b2a95 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 409 438 3.2E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_19945 5da0bfa42f1cffa806271d6a768b2a95 545 SUPERFAMILY SSF58104 235 544 8.5E-73 T 14-10-2018 JV59_19945 5da0bfa42f1cffa806271d6a768b2a95 545 Pfam PF17200 Single Cache domain 2 43 184 1.2E-37 T 14-10-2018 IPR033480 Single Cache domain 2 JV59_19945 5da0bfa42f1cffa806271d6a768b2a95 545 SMART SM01049 38 131 3.1E-26 T 14-10-2018 IPR033480 Single Cache domain 2 JV59_31205 a4894119761eb53a172cc69cb643c08a 191 SUPERFAMILY SSF116927 31 188 1.75E-56 T 14-10-2018 IPR035074 EspA/CesA-like JV59_31205 a4894119761eb53a172cc69cb643c08a 191 Pfam PF03433 EspA-like secreted protein 8 185 6.5E-65 T 14-10-2018 IPR005095 EspA-like secreted protein JV59_18625 7e8aae377774c4c2514c72fcd2e10095 144 PIRSF PIRSF000077 38 142 2.9E-32 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 JV59_18625 7e8aae377774c4c2514c72fcd2e10095 144 PRINTS PR00421 Thioredoxin family signature 58 66 2.4E-7 T 14-10-2018 JV59_18625 7e8aae377774c4c2514c72fcd2e10095 144 PRINTS PR00421 Thioredoxin family signature 106 117 2.4E-7 T 14-10-2018 JV59_18625 7e8aae377774c4c2514c72fcd2e10095 144 PRINTS PR00421 Thioredoxin family signature 66 75 2.4E-7 T 14-10-2018 JV59_18625 7e8aae377774c4c2514c72fcd2e10095 144 Gene3D G3DSA:2.20.28.140 2 37 4.2E-15 T 14-10-2018 JV59_18625 7e8aae377774c4c2514c72fcd2e10095 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 47 141 6.3E-35 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 JV59_18625 7e8aae377774c4c2514c72fcd2e10095 144 Gene3D G3DSA:3.40.30.10 41 144 3.1E-33 T 14-10-2018 JV59_18625 7e8aae377774c4c2514c72fcd2e10095 144 SUPERFAMILY SSF52833 29 142 2.84E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_18625 7e8aae377774c4c2514c72fcd2e10095 144 Pfam PF00085 Thioredoxin 44 140 2.3E-28 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 JV59_39870 acbf7601d04541d5eab2bfeb4d97b947 304 SUPERFAMILY SSF103481 190 291 2.09E-8 T 14-10-2018 JV59_39870 acbf7601d04541d5eab2bfeb4d97b947 304 SUPERFAMILY SSF103481 49 146 1.83E-13 T 14-10-2018 JV59_39870 acbf7601d04541d5eab2bfeb4d97b947 304 TIGRFAM TIGR00688 rarD: protein RarD 11 264 2.8E-86 T 14-10-2018 IPR004626 RarD protein GO:0005887 JV59_39870 acbf7601d04541d5eab2bfeb4d97b947 304 Pfam PF00892 EamA-like transporter family 12 145 2.1E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_38740 8d0f1f6950f67b16494de0ae1286d9b0 143 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 15 136 2.1E-46 T 14-10-2018 IPR014170 TonB system transport protein ExbD type-1 GO:0016020|GO:0055085 JV59_38740 8d0f1f6950f67b16494de0ae1286d9b0 143 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 133 2.7E-23 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 JV59_38740 8d0f1f6950f67b16494de0ae1286d9b0 143 Gene3D G3DSA:3.30.420.270 63 132 4.1E-16 T 14-10-2018 JV59_31250 2c3792348abd7d51a36ba3abfdc3f521 380 Gene3D G3DSA:3.40.50.880 1 309 5.8E-30 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_31250 2c3792348abd7d51a36ba3abfdc3f521 380 Pfam PF07722 Peptidase C26 107 271 2.8E-18 T 14-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 JV59_31250 2c3792348abd7d51a36ba3abfdc3f521 380 SUPERFAMILY SSF52317 63 323 2.05E-18 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_01035 b00d63541d3baa7db04b736ea5eb0888 234 SUPERFAMILY SSF54060 23 231 1.65E-94 T 14-10-2018 JV59_01035 b00d63541d3baa7db04b736ea5eb0888 234 Pfam PF04231 Endonuclease I 30 230 1.6E-46 T 14-10-2018 IPR007346 Endonuclease I GO:0004518 JV59_29605 f9fb88f9f0a5cbfb18464dec3b9d33b6 391 SUPERFAMILY SSF55347 148 318 1.8E-33 T 14-10-2018 JV59_29605 f9fb88f9f0a5cbfb18464dec3b9d33b6 391 SUPERFAMILY SSF51735 9 173 1.07E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_29605 f9fb88f9f0a5cbfb18464dec3b9d33b6 391 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 154 276 1.4E-10 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 JV59_29605 f9fb88f9f0a5cbfb18464dec3b9d33b6 391 Gene3D G3DSA:3.30.360.10 147 388 4.2E-125 T 14-10-2018 JV59_29605 f9fb88f9f0a5cbfb18464dec3b9d33b6 391 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 12 142 6.0E-27 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 JV59_29605 f9fb88f9f0a5cbfb18464dec3b9d33b6 391 Gene3D G3DSA:3.40.50.720 17 363 4.2E-125 T 14-10-2018 JV59_29335 6fe1f41a782bfc9b283ea3367d27a868 479 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 2 464 4.9E-195 T 14-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 JV59_29335 6fe1f41a782bfc9b283ea3367d27a868 479 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 JV59_29335 6fe1f41a782bfc9b283ea3367d27a868 479 Pfam PF02378 Phosphotransferase system, EIIC 110 410 1.3E-51 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 JV59_29335 6fe1f41a782bfc9b283ea3367d27a868 479 Pfam PF00367 phosphotransferase system, EIIB 8 41 7.3E-14 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 JV59_29335 6fe1f41a782bfc9b283ea3367d27a868 479 Gene3D G3DSA:3.30.1360.60 1 78 6.1E-25 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 JV59_29335 6fe1f41a782bfc9b283ea3367d27a868 479 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 28 110 9.5E-22 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 JV59_29335 6fe1f41a782bfc9b283ea3367d27a868 479 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 164 453 2.7E-95 T 14-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 JV59_29335 6fe1f41a782bfc9b283ea3367d27a868 479 SUPERFAMILY SSF55604 6 82 1.44E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 JV59_28715 1bbee072df69839d61880fd48dc62650 394 Gene3D G3DSA:2.60.120.10 12 282 3.2E-134 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_28715 1bbee072df69839d61880fd48dc62650 394 Pfam PF01238 Phosphomannose isomerase type I 8 361 1.9E-83 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_28715 1bbee072df69839d61880fd48dc62650 394 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 262 287 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_28715 1bbee072df69839d61880fd48dc62650 394 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 131 139 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_28715 1bbee072df69839d61880fd48dc62650 394 SUPERFAMILY SSF51182 5 381 3.3E-100 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JV59_28715 1bbee072df69839d61880fd48dc62650 394 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 7 387 7.0E-96 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_28715 1bbee072df69839d61880fd48dc62650 394 Gene3D G3DSA:1.10.441.10 155 307 3.2E-134 T 14-10-2018 JV59_28715 1bbee072df69839d61880fd48dc62650 394 Gene3D G3DSA:2.60.120.10 308 388 3.2E-134 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_28715 1bbee072df69839d61880fd48dc62650 394 PIRSF PIRSF001480 5 394 1.5E-105 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_28715 1bbee072df69839d61880fd48dc62650 394 PRINTS PR00714 Phosphomannose isomerase type I signature 38 53 3.7E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_28715 1bbee072df69839d61880fd48dc62650 394 PRINTS PR00714 Phosphomannose isomerase type I signature 131 154 3.7E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_28715 1bbee072df69839d61880fd48dc62650 394 PRINTS PR00714 Phosphomannose isomerase type I signature 262 281 3.7E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_28715 1bbee072df69839d61880fd48dc62650 394 PRINTS PR00714 Phosphomannose isomerase type I signature 243 262 3.7E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_28715 1bbee072df69839d61880fd48dc62650 394 PRINTS PR00714 Phosphomannose isomerase type I signature 281 300 3.7E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_28715 1bbee072df69839d61880fd48dc62650 394 PRINTS PR00714 Phosphomannose isomerase type I signature 86 107 3.7E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_28715 1bbee072df69839d61880fd48dc62650 394 PRINTS PR00714 Phosphomannose isomerase type I signature 227 242 3.7E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_28715 1bbee072df69839d61880fd48dc62650 394 PRINTS PR00714 Phosphomannose isomerase type I signature 10 28 3.7E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_36290 66c4a93074142ed998f6de091897c800 476 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 59 84 - T 14-10-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 JV59_36290 66c4a93074142ed998f6de091897c800 476 Gene3D G3DSA:1.20.1250.20 228 434 3.4E-6 T 14-10-2018 JV59_36290 66c4a93074142ed998f6de091897c800 476 Gene3D G3DSA:1.20.1250.20 11 209 1.4E-10 T 14-10-2018 JV59_36290 66c4a93074142ed998f6de091897c800 476 SUPERFAMILY SSF103473 15 446 1.7E-32 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_36290 66c4a93074142ed998f6de091897c800 476 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 8 452 1.3E-161 T 14-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 JV59_36290 66c4a93074142ed998f6de091897c800 476 Pfam PF13347 MFS/sugar transport protein 10 438 1.2E-91 T 14-10-2018 JV59_23535 fe0de1a468ab9875df295e9b4a416ab8 117 Pfam PF01588 Putative tRNA binding domain 20 113 5.4E-19 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 JV59_23535 fe0de1a468ab9875df295e9b4a416ab8 117 Gene3D G3DSA:2.40.50.140 4 116 9.4E-30 T 14-10-2018 JV59_23535 fe0de1a468ab9875df295e9b4a416ab8 117 SUPERFAMILY SSF50249 8 115 2.23E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_38525 228fda6d71e77877e7b3dca257dc7823 354 Gene3D G3DSA:3.20.20.70 1 265 4.0E-74 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_38525 228fda6d71e77877e7b3dca257dc7823 354 SUPERFAMILY SSF51569 1 265 1.34E-54 T 14-10-2018 JV59_38525 228fda6d71e77877e7b3dca257dc7823 354 Pfam PF00682 HMGL-like 4 258 1.5E-38 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 JV59_32825 2e8b8c501d65e558fb88b221ab09ef24 257 Pfam PF01636 Phosphotransferase enzyme family 98 162 1.2E-11 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase JV59_32825 2e8b8c501d65e558fb88b221ab09ef24 257 Gene3D G3DSA:3.90.1200.10 76 249 2.3E-11 T 14-10-2018 JV59_32825 2e8b8c501d65e558fb88b221ab09ef24 257 SUPERFAMILY SSF56112 1 230 6.28E-28 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily JV59_26615 f3d2a187a95b30a375b3149553d84438 132 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 36 128 1.0E-5 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_26615 f3d2a187a95b30a375b3149553d84438 132 PIRSF PIRSF029225 1 132 5.1E-36 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_26615 f3d2a187a95b30a375b3149553d84438 132 Gene3D G3DSA:3.40.50.10220 35 132 5.4E-25 T 14-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_26615 f3d2a187a95b30a375b3149553d84438 132 Pfam PF03603 DNA polymerase III psi subunit 3 129 6.0E-34 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_26615 f3d2a187a95b30a375b3149553d84438 132 SUPERFAMILY SSF102220 32 130 3.14E-24 T 14-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_22090 7d014d2ce43da7d0e66cd995a06c8fbd 300 SUPERFAMILY SSF46785 7 86 4.82E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_22090 7d014d2ce43da7d0e66cd995a06c8fbd 300 Pfam PF03466 LysR substrate binding domain 91 295 1.2E-34 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_22090 7d014d2ce43da7d0e66cd995a06c8fbd 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 8.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_22090 7d014d2ce43da7d0e66cd995a06c8fbd 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 8.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_22090 7d014d2ce43da7d0e66cd995a06c8fbd 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 8.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_22090 7d014d2ce43da7d0e66cd995a06c8fbd 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 4.5E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_22090 7d014d2ce43da7d0e66cd995a06c8fbd 300 Gene3D G3DSA:3.40.190.290 92 296 1.1E-57 T 14-10-2018 JV59_22090 7d014d2ce43da7d0e66cd995a06c8fbd 300 SUPERFAMILY SSF53850 91 299 3.8E-37 T 14-10-2018 JV59_22090 7d014d2ce43da7d0e66cd995a06c8fbd 300 Gene3D G3DSA:1.10.10.10 5 90 2.9E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_23040 1fc428a9933c1511291721a99aa1bf9d 303 Gene3D G3DSA:3.40.190.290 96 275 1.1E-18 T 14-10-2018 JV59_23040 1fc428a9933c1511291721a99aa1bf9d 303 Gene3D G3DSA:1.10.10.10 6 93 6.5E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_23040 1fc428a9933c1511291721a99aa1bf9d 303 Pfam PF03466 LysR substrate binding domain 91 292 1.2E-23 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_23040 1fc428a9933c1511291721a99aa1bf9d 303 SUPERFAMILY SSF46785 6 86 1.03E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_23040 1fc428a9933c1511291721a99aa1bf9d 303 SUPERFAMILY SSF53850 93 293 2.33E-25 T 14-10-2018 JV59_23040 1fc428a9933c1511291721a99aa1bf9d 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.0E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_36435 9f4b06eec70dcd173d1871bb4d3e416e 171 SUPERFAMILY SSF46565 1 72 2.75E-17 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JV59_36435 9f4b06eec70dcd173d1871bb4d3e416e 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 1.4E-41 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 JV59_36435 9f4b06eec70dcd173d1871bb4d3e416e 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 88 163 1.9E-19 T 14-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 JV59_36435 9f4b06eec70dcd173d1871bb4d3e416e 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.32 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 JV59_36435 9f4b06eec70dcd173d1871bb4d3e416e 171 SUPERFAMILY SSF47144 77 170 4.58E-25 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 JV59_36435 9f4b06eec70dcd173d1871bb4d3e416e 171 Pfam PF00226 DnaJ domain 2 70 1.1E-7 T 14-10-2018 IPR001623 DnaJ domain JV59_36435 9f4b06eec70dcd173d1871bb4d3e416e 171 SMART SM00271 1 66 2.5E-11 T 14-10-2018 IPR001623 DnaJ domain JV59_36435 9f4b06eec70dcd173d1871bb4d3e416e 171 Gene3D G3DSA:1.20.1280.20 80 171 3.0E-27 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 JV59_36435 9f4b06eec70dcd173d1871bb4d3e416e 171 Gene3D G3DSA:1.10.287.110 1 79 1.9E-24 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JV59_26295 ceafb7645b0e44be743e3e02e8f34986 215 SUPERFAMILY SSF46894 139 212 8.5E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_26295 ceafb7645b0e44be743e3e02e8f34986 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 4.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_26295 ceafb7645b0e44be743e3e02e8f34986 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 4.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_26295 ceafb7645b0e44be743e3e02e8f34986 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 4.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_26295 ceafb7645b0e44be743e3e02e8f34986 215 Gene3D G3DSA:3.40.50.2300 8 142 2.0E-29 T 14-10-2018 JV59_26295 ceafb7645b0e44be743e3e02e8f34986 215 Gene3D G3DSA:1.10.10.10 145 215 1.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_26295 ceafb7645b0e44be743e3e02e8f34986 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 4.5E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_26295 ceafb7645b0e44be743e3e02e8f34986 215 SMART SM00421 152 209 4.0E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_30620 bec042d81c2db5023788b8d9dcd00425 743 Gene3D G3DSA:2.170.130.10 40 177 1.3E-40 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily JV59_30620 bec042d81c2db5023788b8d9dcd00425 743 SUPERFAMILY SSF56935 25 743 9.16E-141 T 14-10-2018 JV59_30620 bec042d81c2db5023788b8d9dcd00425 743 Pfam PF00593 TonB dependent receptor 238 741 1.6E-53 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel JV59_30620 bec042d81c2db5023788b8d9dcd00425 743 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 14-10-2018 IPR010916 TonB box, conserved site JV59_30620 bec042d81c2db5023788b8d9dcd00425 743 Gene3D G3DSA:2.40.170.20 181 743 1.2E-126 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily JV59_30620 bec042d81c2db5023788b8d9dcd00425 743 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 165 2.9E-24 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain JV59_16760 6be47f3395328d2a790f3025a556deaf 261 Gene3D G3DSA:3.40.50.2300 2 133 1.2E-34 T 14-10-2018 JV59_16760 6be47f3395328d2a790f3025a556deaf 261 Pfam PF00072 Response regulator receiver domain 9 118 5.5E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_16760 6be47f3395328d2a790f3025a556deaf 261 SMART SM00448 6 118 2.1E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_16760 6be47f3395328d2a790f3025a556deaf 261 Gene3D G3DSA:2.40.50.40 153 226 3.3E-9 T 14-10-2018 JV59_16760 6be47f3395328d2a790f3025a556deaf 261 SMART SM00850 162 261 5.4E-23 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 JV59_16760 6be47f3395328d2a790f3025a556deaf 261 Pfam PF04397 LytTr DNA-binding domain 163 260 2.5E-22 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 JV59_16760 6be47f3395328d2a790f3025a556deaf 261 SUPERFAMILY SSF52172 7 136 2.13E-33 T 14-10-2018 IPR011006 CheY-like superfamily JV59_39455 ad1d69556bb1e9d745cd684be26b6943 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 120 5.1E-23 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 JV59_39455 ad1d69556bb1e9d745cd684be26b6943 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 125 18.573 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 JV59_39455 ad1d69556bb1e9d745cd684be26b6943 127 TIGRFAM TIGR00494 crcB: protein CrcB 10 123 4.8E-29 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 JV59_17850 42d5038029b67c86ad0b51ba9d0023b1 152 SUPERFAMILY SSF51182 37 138 2.17E-14 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JV59_17850 42d5038029b67c86ad0b51ba9d0023b1 152 Gene3D G3DSA:2.60.120.10 49 148 8.8E-14 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_17850 42d5038029b67c86ad0b51ba9d0023b1 152 Pfam PF07883 Cupin domain 65 136 4.2E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel JV59_26235 3eb6742f3d887b3f1dd01a21c2fdf03a 450 Gene3D G3DSA:3.40.1190.10 92 310 1.6E-56 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JV59_26235 3eb6742f3d887b3f1dd01a21c2fdf03a 450 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 58.807 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 JV59_26235 3eb6742f3d887b3f1dd01a21c2fdf03a 450 SUPERFAMILY SSF53623 97 308 2.09E-52 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JV59_26235 3eb6742f3d887b3f1dd01a21c2fdf03a 450 Pfam PF01225 Mur ligase family, catalytic domain 2 101 2.0E-19 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 JV59_26235 3eb6742f3d887b3f1dd01a21c2fdf03a 450 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 448 7.3E-257 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 JV59_26235 3eb6742f3d887b3f1dd01a21c2fdf03a 450 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 387 2.4E-11 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 JV59_26235 3eb6742f3d887b3f1dd01a21c2fdf03a 450 Pfam PF08245 Mur ligase middle domain 108 291 3.4E-21 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 JV59_26235 3eb6742f3d887b3f1dd01a21c2fdf03a 450 SUPERFAMILY SSF51984 1 89 1.7E-22 T 14-10-2018 JV59_26235 3eb6742f3d887b3f1dd01a21c2fdf03a 450 SUPERFAMILY SSF53244 311 447 3.01E-39 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JV59_26235 3eb6742f3d887b3f1dd01a21c2fdf03a 450 Gene3D G3DSA:3.90.190.20 314 450 3.9E-34 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JV59_26235 3eb6742f3d887b3f1dd01a21c2fdf03a 450 Gene3D G3DSA:3.40.50.720 1 90 1.4E-35 T 14-10-2018 JV59_24840 2951bc005b6f6f549c55829d72a2ab41 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 2.2E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_24840 2951bc005b6f6f549c55829d72a2ab41 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 2.2E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_24840 2951bc005b6f6f549c55829d72a2ab41 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 2.2E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_24840 2951bc005b6f6f549c55829d72a2ab41 158 Gene3D G3DSA:3.30.70.920 54 148 1.5E-18 T 14-10-2018 JV59_24840 2951bc005b6f6f549c55829d72a2ab41 158 SUPERFAMILY SSF54909 65 143 2.41E-13 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_24840 2951bc005b6f6f549c55829d72a2ab41 158 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 5.7E-20 T 14-10-2018 JV59_24840 2951bc005b6f6f549c55829d72a2ab41 158 Gene3D G3DSA:1.10.10.10 4 53 1.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_24840 2951bc005b6f6f549c55829d72a2ab41 158 SUPERFAMILY SSF46785 2 62 5.41E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_24840 2951bc005b6f6f549c55829d72a2ab41 158 Pfam PF01037 Lrp/AsnC ligand binding domain 70 142 1.4E-16 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JV59_24840 2951bc005b6f6f549c55829d72a2ab41 158 SMART SM00344 3 112 6.7E-42 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 JV59_21080 1b25dafbf320c00d977e27065316fd38 306 Gene3D G3DSA:3.40.190.10 168 262 3.3E-17 T 14-10-2018 JV59_21080 1b25dafbf320c00d977e27065316fd38 306 Gene3D G3DSA:3.40.190.10 98 289 3.3E-17 T 14-10-2018 JV59_21080 1b25dafbf320c00d977e27065316fd38 306 SUPERFAMILY SSF46785 3 83 6.61E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_21080 1b25dafbf320c00d977e27065316fd38 306 Pfam PF03466 LysR substrate binding domain 92 292 1.2E-8 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_21080 1b25dafbf320c00d977e27065316fd38 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_21080 1b25dafbf320c00d977e27065316fd38 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_21080 1b25dafbf320c00d977e27065316fd38 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_21080 1b25dafbf320c00d977e27065316fd38 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.4E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_21080 1b25dafbf320c00d977e27065316fd38 306 SUPERFAMILY SSF53850 92 298 8.14E-16 T 14-10-2018 JV59_21080 1b25dafbf320c00d977e27065316fd38 306 Gene3D G3DSA:1.10.10.10 1 85 2.3E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_39380 cd83c2fc752db3bd1fde8b007d895410 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 JV59_39380 cd83c2fc752db3bd1fde8b007d895410 391 Gene3D G3DSA:3.40.47.10 8 271 2.8E-151 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_39380 cd83c2fc752db3bd1fde8b007d895410 391 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 7 391 2.6E-241 T 14-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 JV59_39380 cd83c2fc752db3bd1fde8b007d895410 391 SUPERFAMILY SSF53901 267 390 4.01E-44 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_39380 cd83c2fc752db3bd1fde8b007d895410 391 Gene3D G3DSA:3.40.47.10 138 385 2.8E-151 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_39380 cd83c2fc752db3bd1fde8b007d895410 391 SUPERFAMILY SSF53901 5 263 1.39E-78 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_39380 cd83c2fc752db3bd1fde8b007d895410 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 JV59_39380 cd83c2fc752db3bd1fde8b007d895410 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 JV59_39380 cd83c2fc752db3bd1fde8b007d895410 391 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 5 391 60.458 T 14-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 JV59_39380 cd83c2fc752db3bd1fde8b007d895410 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 389 2.0E-142 T 14-10-2018 IPR002155 Thiolase GO:0016747 JV59_39380 cd83c2fc752db3bd1fde8b007d895410 391 Pfam PF02803 Thiolase, C-terminal domain 266 390 2.3E-49 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 JV59_39380 cd83c2fc752db3bd1fde8b007d895410 391 PIRSF PIRSF000429 2 391 2.3E-132 T 14-10-2018 IPR002155 Thiolase GO:0016747 JV59_39380 cd83c2fc752db3bd1fde8b007d895410 391 Pfam PF00108 Thiolase, N-terminal domain 8 258 2.4E-83 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 JV59_26260 e039f7b25f19c6a3b541577b850b6742 175 Gene3D G3DSA:1.10.60.30 28 102 2.1E-26 T 14-10-2018 JV59_26260 e039f7b25f19c6a3b541577b850b6742 175 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 8 172 23.397 T 14-10-2018 IPR006839 Ribosome-associated, YjgA JV59_26260 e039f7b25f19c6a3b541577b850b6742 175 Gene3D G3DSA:1.10.60.30 103 174 8.9E-25 T 14-10-2018 JV59_26260 e039f7b25f19c6a3b541577b850b6742 175 PIRSF PIRSF016183 1 174 5.6E-72 T 14-10-2018 IPR006839 Ribosome-associated, YjgA JV59_26260 e039f7b25f19c6a3b541577b850b6742 175 SUPERFAMILY SSF158710 28 170 1.15E-51 T 14-10-2018 IPR023153 PSPTO4464-like domain superfamily JV59_26260 e039f7b25f19c6a3b541577b850b6742 175 Pfam PF04751 Protein of unknown function (DUF615) 18 168 1.6E-56 T 14-10-2018 IPR006839 Ribosome-associated, YjgA JV59_36015 6e62a8d548f2ad8b9fe31e4842cfd897 407 Gene3D G3DSA:1.10.287.470 100 173 1.7E-92 T 14-10-2018 JV59_36015 6e62a8d548f2ad8b9fe31e4842cfd897 407 Gene3D G3DSA:2.40.30.170 53 302 1.7E-92 T 14-10-2018 JV59_36015 6e62a8d548f2ad8b9fe31e4842cfd897 407 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 292 2.0E-21 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JV59_36015 6e62a8d548f2ad8b9fe31e4842cfd897 407 Gene3D G3DSA:2.40.420.20 303 371 1.7E-92 T 14-10-2018 JV59_36015 6e62a8d548f2ad8b9fe31e4842cfd897 407 Gene3D G3DSA:2.40.50.100 65 208 1.7E-92 T 14-10-2018 JV59_36015 6e62a8d548f2ad8b9fe31e4842cfd897 407 SUPERFAMILY SSF111369 55 296 5.1E-64 T 14-10-2018 JV59_36015 6e62a8d548f2ad8b9fe31e4842cfd897 407 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 373 5.3E-82 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 JV59_28505 5eedf2bb82b821df05a6579e62cb6424 273 SUPERFAMILY SSF51735 2 266 3.95E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_28505 5eedf2bb82b821df05a6579e62cb6424 273 Pfam PF13460 NAD(P)H-binding 10 183 1.5E-13 T 14-10-2018 IPR016040 NAD(P)-binding domain JV59_28505 5eedf2bb82b821df05a6579e62cb6424 273 Gene3D G3DSA:3.40.50.720 1 271 2.6E-38 T 14-10-2018 JV59_32145 1a6ac487788fdff791bb98894c299bc0 182 PIRSF PIRSF006135 2 177 1.7E-54 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 JV59_32145 1a6ac487788fdff791bb98894c299bc0 182 SUPERFAMILY SSF52540 3 175 7.23E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_32145 1a6ac487788fdff791bb98894c299bc0 182 Gene3D G3DSA:3.40.50.300 3 175 4.6E-57 T 14-10-2018 JV59_32145 1a6ac487788fdff791bb98894c299bc0 182 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 5 173 3.0E-57 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 JV59_39855 fe4b74991dd097d3796bc51d040f716a 582 Pfam PF01019 Gamma-glutamyltranspeptidase 62 577 8.4E-162 T 14-10-2018 JV59_39855 fe4b74991dd097d3796bc51d040f716a 582 Gene3D G3DSA:3.60.20.40 406 582 1.6E-58 T 14-10-2018 JV59_39855 fe4b74991dd097d3796bc51d040f716a 582 Gene3D G3DSA:1.10.246.130 280 405 1.8E-40 T 14-10-2018 JV59_39855 fe4b74991dd097d3796bc51d040f716a 582 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 48 574 7.2E-138 T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 JV59_39855 fe4b74991dd097d3796bc51d040f716a 582 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 162 181 7.5E-65 T 14-10-2018 JV59_39855 fe4b74991dd097d3796bc51d040f716a 582 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 425 443 7.5E-65 T 14-10-2018 JV59_39855 fe4b74991dd097d3796bc51d040f716a 582 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 461 476 7.5E-65 T 14-10-2018 JV59_39855 fe4b74991dd097d3796bc51d040f716a 582 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 69 94 7.5E-65 T 14-10-2018 JV59_39855 fe4b74991dd097d3796bc51d040f716a 582 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 144 162 7.5E-65 T 14-10-2018 JV59_39855 fe4b74991dd097d3796bc51d040f716a 582 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 294 313 7.5E-65 T 14-10-2018 JV59_39855 fe4b74991dd097d3796bc51d040f716a 582 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 403 421 7.5E-65 T 14-10-2018 JV59_39855 fe4b74991dd097d3796bc51d040f716a 582 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 264 280 7.5E-65 T 14-10-2018 JV59_39855 fe4b74991dd097d3796bc51d040f716a 582 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 485 502 7.5E-65 T 14-10-2018 JV59_39855 fe4b74991dd097d3796bc51d040f716a 582 SUPERFAMILY SSF56235 39 581 4.82E-176 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JV59_25910 7c16901abde2f185fb6e7ff16db4cf9a 236 Pfam PF12840 Helix-turn-helix domain 15 73 2.3E-10 T 14-10-2018 JV59_25910 7c16901abde2f185fb6e7ff16db4cf9a 236 SUPERFAMILY SSF46785 8 93 1.61E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_25910 7c16901abde2f185fb6e7ff16db4cf9a 236 SMART SM00418 16 93 4.2E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_25910 7c16901abde2f185fb6e7ff16db4cf9a 236 Gene3D G3DSA:1.10.10.10 6 97 2.5E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_26485 c140bcad27407ec5ef442db9d5dadd2e 96 SMART SM01152 8 84 2.4E-36 T 14-10-2018 IPR003746 Protein of unknown function DUF167 JV59_26485 c140bcad27407ec5ef442db9d5dadd2e 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 8 94 19.717 T 14-10-2018 IPR003746 Protein of unknown function DUF167 JV59_26485 c140bcad27407ec5ef442db9d5dadd2e 96 SUPERFAMILY SSF69786 4 96 2.49E-30 T 14-10-2018 IPR036591 YggU-like superfamily JV59_26485 c140bcad27407ec5ef442db9d5dadd2e 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 9 89 2.2E-25 T 14-10-2018 IPR005228 Conserved hypothetical protein CHP00251 JV59_26485 c140bcad27407ec5ef442db9d5dadd2e 96 Gene3D G3DSA:3.30.1200.10 1 96 1.1E-32 T 14-10-2018 IPR036591 YggU-like superfamily JV59_26485 c140bcad27407ec5ef442db9d5dadd2e 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 83 4.9E-24 T 14-10-2018 IPR003746 Protein of unknown function DUF167 JV59_40205 b8bd7ad0bc905365bf5297bfef2debb6 647 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 150 3.1E-22 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain JV59_40205 b8bd7ad0bc905365bf5297bfef2debb6 647 Gene3D G3DSA:2.170.130.10 41 158 2.5E-29 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily JV59_40205 b8bd7ad0bc905365bf5297bfef2debb6 647 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 630 647 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site JV59_40205 b8bd7ad0bc905365bf5297bfef2debb6 647 SUPERFAMILY SSF56935 21 647 9.77E-107 T 14-10-2018 JV59_40205 b8bd7ad0bc905365bf5297bfef2debb6 647 Pfam PF00593 TonB dependent receptor 187 645 3.4E-36 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel JV59_40205 b8bd7ad0bc905365bf5297bfef2debb6 647 Gene3D G3DSA:2.40.170.20 166 647 7.4E-71 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily JV59_18760 dfdf884b836367fec283ef79e0d34eee 249 Gene3D G3DSA:3.40.50.720 4 249 1.5E-86 T 14-10-2018 JV59_18760 dfdf884b836367fec283ef79e0d34eee 249 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 248 2.5E-128 T 14-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 JV59_18760 dfdf884b836367fec283ef79e0d34eee 249 SUPERFAMILY SSF69572 4 249 9.29E-84 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 JV59_18760 dfdf884b836367fec283ef79e0d34eee 249 Pfam PF00899 ThiF family 12 246 1.1E-62 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 JV59_21770 56d4b90f28544c6a8a2020d6557aa6ff 407 Pfam PF12094 Protein of unknown function (DUF3570) 8 403 2.3E-74 T 14-10-2018 IPR021953 Protein of unknown function DUF3570 JV59_21770 56d4b90f28544c6a8a2020d6557aa6ff 407 ProSitePatterns PS00018 EF-hand calcium-binding domain. 248 260 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site JV59_25525 cd196a89c108915f44411bb8868b83e0 219 Gene3D G3DSA:2.40.160.20 23 219 2.8E-16 T 14-10-2018 JV59_25525 cd196a89c108915f44411bb8868b83e0 219 SUPERFAMILY SSF56925 25 219 3.4E-17 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JV59_25525 cd196a89c108915f44411bb8868b83e0 219 Pfam PF13505 Outer membrane protein beta-barrel domain 11 219 2.5E-13 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel JV59_36260 1356893592b6e3b024daa8475e47516c 475 Pfam PF13520 Amino acid permease 11 443 4.9E-32 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 JV59_36260 1356893592b6e3b024daa8475e47516c 475 Gene3D G3DSA:1.20.1740.10 13 473 5.6E-9 T 14-10-2018 JV59_36260 1356893592b6e3b024daa8475e47516c 475 PIRSF PIRSF006060 1 475 3.9E-41 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 JV59_32370 fe667768e8e4e8661891c928efb8790a 82 SUPERFAMILY SSF47413 3 70 9.12E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_32370 fe667768e8e4e8661891c928efb8790a 82 Pfam PF01381 Helix-turn-helix 8 52 1.5E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_32370 fe667768e8e4e8661891c928efb8790a 82 Gene3D G3DSA:1.10.260.40 1 77 7.2E-12 T 14-10-2018 JV59_32370 fe667768e8e4e8661891c928efb8790a 82 SMART SM00530 3 58 1.9E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_00255 d131eb061a7d6e70339478ae90a76ffc 1401 Gene3D G3DSA:1.10.1790.20 1135 1314 1.5E-60 T 14-10-2018 JV59_00255 d131eb061a7d6e70339478ae90a76ffc 1401 Gene3D G3DSA:2.40.50.100 1151 1214 1.5E-60 T 14-10-2018 JV59_00255 d131eb061a7d6e70339478ae90a76ffc 1401 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 4.5E-88 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_00255 d131eb061a7d6e70339478ae90a76ffc 1401 Gene3D G3DSA:2.40.50.100 1022 1126 1.1E-28 T 14-10-2018 JV59_00255 d131eb061a7d6e70339478ae90a76ffc 1401 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 8.9E-78 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_00255 d131eb061a7d6e70339478ae90a76ffc 1401 Gene3D G3DSA:1.10.150.390 1316 1377 7.2E-29 T 14-10-2018 JV59_00255 d131eb061a7d6e70339478ae90a76ffc 1401 Gene3D G3DSA:1.10.40.90 374 416 3.1E-22 T 14-10-2018 JV59_00255 d131eb061a7d6e70339478ae90a76ffc 1401 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 2.2E-18 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_00255 d131eb061a7d6e70339478ae90a76ffc 1401 SUPERFAMILY SSF64484 16 1364 0.0 T 14-10-2018 JV59_00255 d131eb061a7d6e70339478ae90a76ffc 1401 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 4.5E-8 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_00255 d131eb061a7d6e70339478ae90a76ffc 1401 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.9E-27 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_00255 d131eb061a7d6e70339478ae90a76ffc 1401 SMART SM00663 235 514 1.1E-184 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_00255 d131eb061a7d6e70339478ae90a76ffc 1401 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_00255 d131eb061a7d6e70339478ae90a76ffc 1401 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 2.6E-27 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_00255 d131eb061a7d6e70339478ae90a76ffc 1401 Gene3D G3DSA:1.10.132.30 641 790 1.7E-65 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_00255 d131eb061a7d6e70339478ae90a76ffc 1401 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1377 18.877 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JV59_00255 d131eb061a7d6e70339478ae90a76ffc 1401 Gene3D G3DSA:2.40.50.100 948 1021 3.0E-23 T 14-10-2018 JV59_00255 d131eb061a7d6e70339478ae90a76ffc 1401 Gene3D G3DSA:1.10.274.100 490 640 2.5E-39 T 14-10-2018 JV59_37745 bf2480c0df2cc01df668f892547f5726 288 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 116 149 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 JV59_37745 bf2480c0df2cc01df668f892547f5726 288 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 41 55 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 JV59_37745 bf2480c0df2cc01df668f892547f5726 288 Gene3D G3DSA:3.30.950.10 152 287 6.9E-45 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 JV59_37745 bf2480c0df2cc01df668f892547f5726 288 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 38 248 5.0E-45 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 JV59_37745 bf2480c0df2cc01df668f892547f5726 288 Gene3D G3DSA:3.40.1010.10 34 151 1.6E-43 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 JV59_37745 bf2480c0df2cc01df668f892547f5726 288 SUPERFAMILY SSF53790 35 275 5.23E-78 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 JV59_37745 bf2480c0df2cc01df668f892547f5726 288 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 36 269 4.0E-92 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 JV59_23010 37a53e9285c4bb4e6fc80bb94b91eebc 160 SMART SM00347 42 145 1.6E-26 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_23010 37a53e9285c4bb4e6fc80bb94b91eebc 160 SUPERFAMILY SSF46785 9 155 7.31E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_23010 37a53e9285c4bb4e6fc80bb94b91eebc 160 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site JV59_23010 37a53e9285c4bb4e6fc80bb94b91eebc 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 2.0E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_23010 37a53e9285c4bb4e6fc80bb94b91eebc 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 2.0E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_23010 37a53e9285c4bb4e6fc80bb94b91eebc 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 2.0E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_23010 37a53e9285c4bb4e6fc80bb94b91eebc 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 2.0E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_23010 37a53e9285c4bb4e6fc80bb94b91eebc 160 Pfam PF01047 MarR family 51 110 5.7E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_23010 37a53e9285c4bb4e6fc80bb94b91eebc 160 Gene3D G3DSA:1.10.10.10 1 160 4.9E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_39250 19b2048f6b9330256b28536da117bcf3 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 217 9.5E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_39250 19b2048f6b9330256b28536da117bcf3 223 Gene3D G3DSA:1.10.3720.10 1 222 2.1E-52 T 14-10-2018 IPR035906 MetI-like superfamily JV59_39250 19b2048f6b9330256b28536da117bcf3 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 6.6E-25 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 JV59_39250 19b2048f6b9330256b28536da117bcf3 223 SUPERFAMILY SSF161098 13 203 1.96E-43 T 14-10-2018 IPR035906 MetI-like superfamily JV59_22530 5c53897466de7b2d089266f433e90f37 119 Gene3D G3DSA:3.30.70.1060 1 117 1.2E-36 T 14-10-2018 JV59_22530 5c53897466de7b2d089266f433e90f37 119 SUPERFAMILY SSF54909 1 116 6.84E-32 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_22530 5c53897466de7b2d089266f433e90f37 119 Pfam PF03795 YCII-related domain 1 114 7.7E-20 T 14-10-2018 IPR005545 YCII-related JV59_21600 5a2eddc393be531f54c9539e01dc0466 311 Pfam PF03466 LysR substrate binding domain 96 301 4.1E-35 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_21600 5a2eddc393be531f54c9539e01dc0466 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 1.3E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_21600 5a2eddc393be531f54c9539e01dc0466 311 SUPERFAMILY SSF46785 10 117 7.26E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_21600 5a2eddc393be531f54c9539e01dc0466 311 SUPERFAMILY SSF53850 96 304 2.35E-36 T 14-10-2018 JV59_21600 5a2eddc393be531f54c9539e01dc0466 311 Gene3D G3DSA:3.40.190.10 169 272 5.2E-58 T 14-10-2018 JV59_21600 5a2eddc393be531f54c9539e01dc0466 311 Gene3D G3DSA:1.10.10.10 9 95 2.4E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_21600 5a2eddc393be531f54c9539e01dc0466 311 Gene3D G3DSA:3.40.190.10 97 298 5.2E-58 T 14-10-2018 JV59_37170 8cf6d3105fda7ce301b1ed6b880b49cd 158 Pfam PF06271 RDD family 9 148 2.8E-23 T 14-10-2018 IPR010432 RDD JV59_38890 c3468dff0014828502ba5b71ed86748b 147 Pfam PF08334 Type II secretion system (T2SS), protein G 33 141 2.9E-43 T 14-10-2018 IPR013545 Type II secretion system protein G JV59_38890 c3468dff0014828502ba5b71ed86748b 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_38890 c3468dff0014828502ba5b71ed86748b 147 Gene3D G3DSA:3.30.700.10 33 141 9.7E-45 T 14-10-2018 JV59_38890 c3468dff0014828502ba5b71ed86748b 147 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 9 142 1.2E-58 T 14-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 JV59_38890 c3468dff0014828502ba5b71ed86748b 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 30 3.7E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_38890 c3468dff0014828502ba5b71ed86748b 147 SUPERFAMILY SSF54523 36 142 8.37E-39 T 14-10-2018 JV59_38890 c3468dff0014828502ba5b71ed86748b 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 4.2E-22 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 JV59_38890 c3468dff0014828502ba5b71ed86748b 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 4.2E-22 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 JV59_38890 c3468dff0014828502ba5b71ed86748b 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 31 3.9E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_34340 d64646110611705595c360586d74a1a8 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 174 1.1E-29 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 JV59_34340 d64646110611705595c360586d74a1a8 572 Gene3D G3DSA:3.40.50.970 5 200 1.5E-58 T 14-10-2018 JV59_34340 d64646110611705595c360586d74a1a8 572 SUPERFAMILY SSF52518 389 564 7.78E-23 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_34340 d64646110611705595c360586d74a1a8 572 SUPERFAMILY SSF52467 225 367 1.74E-5 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JV59_34340 d64646110611705595c360586d74a1a8 572 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 7 569 32.583 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 JV59_34340 d64646110611705595c360586d74a1a8 572 PIRSF PIRSF004983 4 572 8.3E-183 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 JV59_34340 d64646110611705595c360586d74a1a8 572 Pfam PF16582 Middle domain of thiamine pyrophosphate 190 404 3.2E-39 T 14-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 JV59_34340 d64646110611705595c360586d74a1a8 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 423 535 6.1E-5 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JV59_34340 d64646110611705595c360586d74a1a8 572 SUPERFAMILY SSF52518 9 183 1.28E-31 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_34340 d64646110611705595c360586d74a1a8 572 Gene3D G3DSA:3.40.50.970 366 571 5.8E-49 T 14-10-2018 JV59_34340 d64646110611705595c360586d74a1a8 572 Gene3D G3DSA:3.40.50.1220 218 345 1.8E-36 T 14-10-2018 JV59_34340 d64646110611705595c360586d74a1a8 572 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 13 444 4.1E-133 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 JV59_23920 b11622e05aacf0e394f0cfee8d8aec7d 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.0E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_23920 b11622e05aacf0e394f0cfee8d8aec7d 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 3.0E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_23920 b11622e05aacf0e394f0cfee8d8aec7d 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 3.0E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_23920 b11622e05aacf0e394f0cfee8d8aec7d 266 SUPERFAMILY SSF51735 2 238 1.05E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_23920 b11622e05aacf0e394f0cfee8d8aec7d 266 Gene3D G3DSA:3.40.50.720 1 265 2.0E-52 T 14-10-2018 JV59_23920 b11622e05aacf0e394f0cfee8d8aec7d 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.1E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_23920 b11622e05aacf0e394f0cfee8d8aec7d 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 1.1E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_23920 b11622e05aacf0e394f0cfee8d8aec7d 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.1E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_23920 b11622e05aacf0e394f0cfee8d8aec7d 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.1E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_23920 b11622e05aacf0e394f0cfee8d8aec7d 266 Pfam PF00106 short chain dehydrogenase 3 199 2.4E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_23180 92ff851ba679ae26963a12fa22110db4 905 Gene3D G3DSA:3.30.450.20 266 388 1.1E-36 T 14-10-2018 JV59_23180 92ff851ba679ae26963a12fa22110db4 905 Gene3D G3DSA:3.30.450.20 393 512 1.7E-35 T 14-10-2018 JV59_23180 92ff851ba679ae26963a12fa22110db4 905 Gene3D G3DSA:3.30.450.20 139 260 4.3E-37 T 14-10-2018 JV59_23180 92ff851ba679ae26963a12fa22110db4 905 Gene3D G3DSA:3.30.450.20 13 133 1.7E-32 T 14-10-2018 JV59_23180 92ff851ba679ae26963a12fa22110db4 905 SUPERFAMILY SSF55785 137 247 2.09E-6 T 14-10-2018 IPR035965 PAS domain superfamily JV59_23180 92ff851ba679ae26963a12fa22110db4 905 SUPERFAMILY SSF58104 577 857 2.62E-76 T 14-10-2018 JV59_23180 92ff851ba679ae26963a12fa22110db4 905 SMART SM00283 610 857 4.3E-96 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_23180 92ff851ba679ae26963a12fa22110db4 905 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 669 825 3.4E-55 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_23180 92ff851ba679ae26963a12fa22110db4 905 SMART SM00091 269 340 0.46 T 14-10-2018 IPR000014 PAS domain JV59_23180 92ff851ba679ae26963a12fa22110db4 905 SMART SM00091 142 209 0.053 T 14-10-2018 IPR000014 PAS domain JV59_23180 92ff851ba679ae26963a12fa22110db4 905 SMART SM00091 15 82 0.021 T 14-10-2018 IPR000014 PAS domain JV59_23180 92ff851ba679ae26963a12fa22110db4 905 SMART SM00091 396 465 21.0 T 14-10-2018 IPR000014 PAS domain JV59_23180 92ff851ba679ae26963a12fa22110db4 905 Pfam PF13426 PAS domain 409 512 0.056 T 14-10-2018 IPR000014 PAS domain JV59_23180 92ff851ba679ae26963a12fa22110db4 905 SMART SM00304 610 662 85.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_23180 92ff851ba679ae26963a12fa22110db4 905 SMART SM00304 784 833 66.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_23180 92ff851ba679ae26963a12fa22110db4 905 SMART SM00304 557 609 5.4E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_23180 92ff851ba679ae26963a12fa22110db4 905 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 631 660 2.0E-53 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_23180 92ff851ba679ae26963a12fa22110db4 905 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 785 814 2.0E-53 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_23180 92ff851ba679ae26963a12fa22110db4 905 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 708 735 2.0E-53 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_23180 92ff851ba679ae26963a12fa22110db4 905 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 737 766 2.0E-53 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_23180 92ff851ba679ae26963a12fa22110db4 905 Gene3D G3DSA:1.10.287.950 556 858 6.4E-91 T 14-10-2018 JV59_23180 92ff851ba679ae26963a12fa22110db4 905 Pfam PF13188 PAS domain 269 322 5.3E-5 T 14-10-2018 IPR000014 PAS domain JV59_23180 92ff851ba679ae26963a12fa22110db4 905 Pfam PF13188 PAS domain 15 69 6.8E-4 T 14-10-2018 IPR000014 PAS domain JV59_23180 92ff851ba679ae26963a12fa22110db4 905 Pfam PF13188 PAS domain 142 193 2.6E-5 T 14-10-2018 IPR000014 PAS domain JV59_23180 92ff851ba679ae26963a12fa22110db4 905 SUPERFAMILY SSF55785 260 386 4.19E-6 T 14-10-2018 IPR035965 PAS domain superfamily JV59_24710 a6bf06f63619b800147093eb987302f6 298 Gene3D G3DSA:3.40.190.10 91 287 3.8E-64 T 14-10-2018 JV59_24710 a6bf06f63619b800147093eb987302f6 298 Gene3D G3DSA:3.40.190.10 162 263 3.8E-64 T 14-10-2018 JV59_24710 a6bf06f63619b800147093eb987302f6 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.4E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_24710 a6bf06f63619b800147093eb987302f6 298 Gene3D G3DSA:1.10.10.10 1 90 1.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_24710 a6bf06f63619b800147093eb987302f6 298 SUPERFAMILY SSF46785 1 87 5.22E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_24710 a6bf06f63619b800147093eb987302f6 298 Pfam PF03466 LysR substrate binding domain 87 290 1.0E-43 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_24710 a6bf06f63619b800147093eb987302f6 298 SUPERFAMILY SSF53850 88 294 1.45E-46 T 14-10-2018 JV59_01095 2f60b26386f1442776a9df3b4797cf74 230 Pfam PF04402 Protein of unknown function (DUF541) 31 227 2.1E-39 T 14-10-2018 IPR007497 Protein of unknown function DUF541 JV59_01095 2f60b26386f1442776a9df3b4797cf74 230 Gene3D G3DSA:3.30.110.170 32 228 3.0E-48 T 14-10-2018 JV59_01095 2f60b26386f1442776a9df3b4797cf74 230 Gene3D G3DSA:3.30.70.2970 41 148 3.0E-48 T 14-10-2018 JV59_26525 7e37fa8b1f7e44cc7669246b812bb598 80 Pfam PF12728 Helix-turn-helix domain 11 66 4.0E-8 T 14-10-2018 JV59_31750 d1152bff8bc282075fd9e8cc4338299e 161 SUPERFAMILY SSF89963 2 86 1.18E-29 T 14-10-2018 IPR036183 YajQ-like superfamily JV59_31750 d1152bff8bc282075fd9e8cc4338299e 161 SUPERFAMILY SSF89963 89 161 4.84E-29 T 14-10-2018 IPR036183 YajQ-like superfamily JV59_31750 d1152bff8bc282075fd9e8cc4338299e 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 7.3E-66 T 14-10-2018 IPR007551 Protein of unknown function DUF520 JV59_31750 d1152bff8bc282075fd9e8cc4338299e 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 29.582 T 14-10-2018 IPR007551 Protein of unknown function DUF520 JV59_31750 d1152bff8bc282075fd9e8cc4338299e 161 Gene3D G3DSA:3.30.70.860 96 161 1.2E-30 T 14-10-2018 IPR035571 UPF0234-like, C-terminal JV59_31750 d1152bff8bc282075fd9e8cc4338299e 161 Gene3D G3DSA:3.30.70.990 9 95 1.3E-28 T 14-10-2018 IPR035570 UPF0234, N-terminal JV59_34485 910098658a6cec356cbd8e8492e6e06f 414 SUPERFAMILY SSF53901 4 252 4.98E-81 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_34485 910098658a6cec356cbd8e8492e6e06f 414 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 1.5E-64 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal JV59_34485 910098658a6cec356cbd8e8492e6e06f 414 Gene3D G3DSA:3.40.47.10 1 255 1.2E-92 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_34485 910098658a6cec356cbd8e8492e6e06f 414 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site JV59_34485 910098658a6cec356cbd8e8492e6e06f 414 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 370 4.6E-36 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal JV59_34485 910098658a6cec356cbd8e8492e6e06f 414 SMART SM00825 Beta-ketoacyl synthase 6 414 9.1E-15 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JV59_34485 910098658a6cec356cbd8e8492e6e06f 414 SUPERFAMILY SSF53901 215 413 2.21E-66 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_34485 910098658a6cec356cbd8e8492e6e06f 414 Gene3D G3DSA:3.40.47.10 261 414 6.8E-48 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_34485 910098658a6cec356cbd8e8492e6e06f 414 PIRSF PIRSF000447 1 414 2.7E-201 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 JV59_34485 910098658a6cec356cbd8e8492e6e06f 414 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 412 9.7E-192 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 JV59_17630 895e2fbfaafe4cb4a7b1885a9ceab01b 318 SUPERFAMILY SSF52540 7 290 9.59E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_17630 895e2fbfaafe4cb4a7b1885a9ceab01b 318 Gene3D G3DSA:3.40.50.300 17 183 2.0E-47 T 14-10-2018 JV59_17630 895e2fbfaafe4cb4a7b1885a9ceab01b 318 PIRSF PIRSF002849 1 318 8.9E-131 T 14-10-2018 JV59_17630 895e2fbfaafe4cb4a7b1885a9ceab01b 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 4.7E-63 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 JV59_17630 895e2fbfaafe4cb4a7b1885a9ceab01b 318 Gene3D G3DSA:1.10.8.300 199 315 6.5E-40 T 14-10-2018 JV59_38530 07350faf6e85493704c76d04297852bd 351 Gene3D G3DSA:3.20.20.70 4 277 3.5E-92 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_38530 07350faf6e85493704c76d04297852bd 351 SUPERFAMILY SSF51269 286 348 1.05E-18 T 14-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 JV59_38530 07350faf6e85493704c76d04297852bd 351 Pfam PF03102 NeuB family 39 277 3.1E-88 T 14-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 JV59_38530 07350faf6e85493704c76d04297852bd 351 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 17 343 2.9E-157 T 14-10-2018 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 JV59_38530 07350faf6e85493704c76d04297852bd 351 Gene3D G3DSA:3.90.1210.10 281 348 7.1E-22 T 14-10-2018 JV59_38530 07350faf6e85493704c76d04297852bd 351 SUPERFAMILY SSF51569 5 301 3.17E-90 T 14-10-2018 JV59_38530 07350faf6e85493704c76d04297852bd 351 SMART SM00858 291 349 3.2E-11 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 JV59_38530 07350faf6e85493704c76d04297852bd 351 Pfam PF08666 SAF domain 292 348 2.6E-10 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 JV59_17980 3a1e3e4fabff5e4d20cb984e777665c5 273 SUPERFAMILY SSF56784 8 262 2.3E-52 T 14-10-2018 IPR036412 HAD-like superfamily JV59_17980 3a1e3e4fabff5e4d20cb984e777665c5 273 Gene3D G3DSA:3.40.50.1000 10 273 5.2E-97 T 14-10-2018 IPR023214 HAD superfamily JV59_17980 3a1e3e4fabff5e4d20cb984e777665c5 273 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 273 137.335 T 14-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 JV59_17980 3a1e3e4fabff5e4d20cb984e777665c5 273 Gene3D G3DSA:1.10.150.240 26 104 5.2E-97 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JV59_17980 3a1e3e4fabff5e4d20cb984e777665c5 273 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 39 207 7.3E-15 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_17980 3a1e3e4fabff5e4d20cb984e777665c5 273 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 207 3.8E-8 T 14-10-2018 JV59_17980 3a1e3e4fabff5e4d20cb984e777665c5 273 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 8 260 6.7E-115 T 14-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 JV59_18700 7d548806fca4046eac14f70856cd5b53 509 SMART SM00267 332 506 1.2E-44 T 14-10-2018 IPR000160 GGDEF domain JV59_18700 7d548806fca4046eac14f70856cd5b53 509 Pfam PF05228 CHASE4 domain 58 215 4.8E-20 T 14-10-2018 IPR007892 CHASE4 JV59_18700 7d548806fca4046eac14f70856cd5b53 509 SUPERFAMILY SSF55073 348 505 1.57E-35 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_18700 7d548806fca4046eac14f70856cd5b53 509 Pfam PF00990 Diguanylate cyclase, GGDEF domain 344 501 1.2E-37 T 14-10-2018 IPR000160 GGDEF domain JV59_18700 7d548806fca4046eac14f70856cd5b53 509 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 339 504 1.0E-36 T 14-10-2018 IPR000160 GGDEF domain JV59_18700 7d548806fca4046eac14f70856cd5b53 509 Gene3D G3DSA:3.30.70.270 329 506 1.1E-40 T 14-10-2018 JV59_23045 a6bd457111b4f5520d73f4aadac9cbd3 105 Gene3D G3DSA:3.30.70.100 1 105 8.9E-41 T 14-10-2018 JV59_23045 a6bd457111b4f5520d73f4aadac9cbd3 105 Pfam PF08803 Putative mono-oxygenase ydhR 3 98 3.2E-40 T 14-10-2018 IPR014910 Putative monooxygenase YdhR JV59_23045 a6bd457111b4f5520d73f4aadac9cbd3 105 SUPERFAMILY SSF54909 1 95 5.36E-33 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_22550 16b56f027d0168e71dd279ccb4879c1f 157 Gene3D G3DSA:3.40.30.10 2 157 1.3E-60 T 14-10-2018 JV59_22550 16b56f027d0168e71dd279ccb4879c1f 157 SUPERFAMILY SSF52833 1 156 1.16E-34 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_22550 16b56f027d0168e71dd279ccb4879c1f 157 Pfam PF08534 Redoxin 3 154 3.1E-39 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 JV59_39915 5131a891632ed57e3786a14e77f3027e 618 SUPERFAMILY SSF50475 3 322 2.04E-123 T 14-10-2018 JV59_39915 5131a891632ed57e3786a14e77f3027e 618 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 474 569 1.8E-23 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 JV59_39915 5131a891632ed57e3786a14e77f3027e 618 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 2.3E-163 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 JV59_39915 5131a891632ed57e3786a14e77f3027e 618 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 454 5.7E-163 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 JV59_39915 5131a891632ed57e3786a14e77f3027e 618 Gene3D G3DSA:3.40.1670.10 337 453 1.9E-44 T 14-10-2018 JV59_39915 5131a891632ed57e3786a14e77f3027e 618 Gene3D G3DSA:3.40.1670.10 479 584 3.9E-28 T 14-10-2018 JV59_39915 5131a891632ed57e3786a14e77f3027e 618 SUPERFAMILY SSF143968 472 616 6.41E-39 T 14-10-2018 JV59_39915 5131a891632ed57e3786a14e77f3027e 618 Gene3D G3DSA:1.20.5.570 585 618 5.1E-12 T 14-10-2018 JV59_39915 5131a891632ed57e3786a14e77f3027e 618 SUPERFAMILY SSF143968 323 460 1.7E-51 T 14-10-2018 JV59_23280 7dae4322210a6256c08f56ad8bc36d09 1022 Pfam PF00873 AcrB/AcrD/AcrF family 13 1013 2.3E-147 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_23280 7dae4322210a6256c08f56ad8bc36d09 1022 Gene3D G3DSA:3.30.70.1320 133 326 2.0E-216 T 14-10-2018 JV59_23280 7dae4322210a6256c08f56ad8bc36d09 1022 Gene3D G3DSA:3.30.70.1430 558 660 2.0E-216 T 14-10-2018 JV59_23280 7dae4322210a6256c08f56ad8bc36d09 1022 Gene3D G3DSA:3.30.2090.10 180 273 2.0E-216 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_23280 7dae4322210a6256c08f56ad8bc36d09 1022 Gene3D G3DSA:3.30.2090.10 709 800 2.0E-216 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_23280 7dae4322210a6256c08f56ad8bc36d09 1022 SUPERFAMILY SSF82866 795 1015 1.44E-37 T 14-10-2018 JV59_23280 7dae4322210a6256c08f56ad8bc36d09 1022 Gene3D G3DSA:1.20.1640.10 507 1011 2.0E-216 T 14-10-2018 JV59_23280 7dae4322210a6256c08f56ad8bc36d09 1022 Gene3D G3DSA:1.20.1640.10 12 506 2.0E-216 T 14-10-2018 JV59_23280 7dae4322210a6256c08f56ad8bc36d09 1022 Gene3D G3DSA:3.30.70.1440 661 854 2.0E-216 T 14-10-2018 JV59_23280 7dae4322210a6256c08f56ad8bc36d09 1022 SUPERFAMILY SSF82693 40 127 4.88E-19 T 14-10-2018 JV59_23280 7dae4322210a6256c08f56ad8bc36d09 1022 Gene3D G3DSA:3.30.70.1430 39 808 2.0E-216 T 14-10-2018 JV59_23280 7dae4322210a6256c08f56ad8bc36d09 1022 SUPERFAMILY SSF82693 555 640 6.28E-5 T 14-10-2018 JV59_23280 7dae4322210a6256c08f56ad8bc36d09 1022 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 1.2E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_23280 7dae4322210a6256c08f56ad8bc36d09 1022 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 1.2E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_23280 7dae4322210a6256c08f56ad8bc36d09 1022 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 1.2E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_23280 7dae4322210a6256c08f56ad8bc36d09 1022 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 1.2E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_23280 7dae4322210a6256c08f56ad8bc36d09 1022 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 1.2E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_23280 7dae4322210a6256c08f56ad8bc36d09 1022 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 1.2E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_23280 7dae4322210a6256c08f56ad8bc36d09 1022 SUPERFAMILY SSF82714 708 774 1.57E-8 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_23280 7dae4322210a6256c08f56ad8bc36d09 1022 SUPERFAMILY SSF82714 185 266 9.81E-10 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_23280 7dae4322210a6256c08f56ad8bc36d09 1022 SUPERFAMILY SSF82693 150 323 5.23E-6 T 14-10-2018 JV59_23280 7dae4322210a6256c08f56ad8bc36d09 1022 SUPERFAMILY SSF82866 303 491 3.01E-35 T 14-10-2018 JV59_18960 acb920ac8b48b74b4379f20678b9af58 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 JV59_18960 acb920ac8b48b74b4379f20678b9af58 405 Pfam PF00483 Nucleotidyl transferase 6 272 1.8E-68 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 JV59_18960 acb920ac8b48b74b4379f20678b9af58 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 378 1.1E-153 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 JV59_18960 acb920ac8b48b74b4379f20678b9af58 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 JV59_18960 acb920ac8b48b74b4379f20678b9af58 405 Gene3D G3DSA:3.90.550.10 1 281 1.4E-93 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_18960 acb920ac8b48b74b4379f20678b9af58 405 Gene3D G3DSA:2.160.10.10 282 403 1.8E-31 T 14-10-2018 JV59_18960 acb920ac8b48b74b4379f20678b9af58 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 194 204 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 JV59_18960 acb920ac8b48b74b4379f20678b9af58 405 SUPERFAMILY SSF53448 3 341 2.82E-79 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_18960 acb920ac8b48b74b4379f20678b9af58 405 SUPERFAMILY SSF51161 307 394 2.19E-15 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JV59_18960 acb920ac8b48b74b4379f20678b9af58 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 404 50.673 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 JV59_00050 b3c9527d07c4ec8859d7b8f51bae72fd 296 Gene3D G3DSA:3.40.190.10 91 290 2.7E-64 T 14-10-2018 JV59_00050 b3c9527d07c4ec8859d7b8f51bae72fd 296 SUPERFAMILY SSF53850 89 294 1.58E-38 T 14-10-2018 JV59_00050 b3c9527d07c4ec8859d7b8f51bae72fd 296 Pfam PF03466 LysR substrate binding domain 90 293 2.0E-42 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_00050 b3c9527d07c4ec8859d7b8f51bae72fd 296 Gene3D G3DSA:1.10.10.10 1 84 5.1E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_00050 b3c9527d07c4ec8859d7b8f51bae72fd 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.7E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_00050 b3c9527d07c4ec8859d7b8f51bae72fd 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.7E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_00050 b3c9527d07c4ec8859d7b8f51bae72fd 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.7E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_00050 b3c9527d07c4ec8859d7b8f51bae72fd 296 SUPERFAMILY SSF46785 1 86 1.11E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_00050 b3c9527d07c4ec8859d7b8f51bae72fd 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.3E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_00050 b3c9527d07c4ec8859d7b8f51bae72fd 296 Gene3D G3DSA:3.40.190.10 161 261 2.7E-64 T 14-10-2018 JV59_28585 671f20f23a0f184a04db367b54d820f4 205 Pfam PF07499 RuvA, C-terminal domain 161 204 3.5E-16 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 JV59_28585 671f20f23a0f184a04db367b54d820f4 205 SUPERFAMILY SSF50249 2 63 9.14E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_28585 671f20f23a0f184a04db367b54d820f4 205 Gene3D G3DSA:1.10.8.10 158 205 2.1E-22 T 14-10-2018 JV59_28585 671f20f23a0f184a04db367b54d820f4 205 SMART SM00278 108 127 0.071 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JV59_28585 671f20f23a0f184a04db367b54d820f4 205 SMART SM00278 73 92 540.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JV59_28585 671f20f23a0f184a04db367b54d820f4 205 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 204 1.2E-64 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 JV59_28585 671f20f23a0f184a04db367b54d820f4 205 SUPERFAMILY SSF47781 66 138 1.22E-19 T 14-10-2018 IPR010994 RuvA domain 2-like JV59_28585 671f20f23a0f184a04db367b54d820f4 205 Pfam PF01330 RuvA N terminal domain 2 62 1.3E-20 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 JV59_28585 671f20f23a0f184a04db367b54d820f4 205 SUPERFAMILY SSF46929 160 204 6.8E-12 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily JV59_28585 671f20f23a0f184a04db367b54d820f4 205 Pfam PF14520 Helix-hairpin-helix domain 72 130 7.6E-14 T 14-10-2018 JV59_28585 671f20f23a0f184a04db367b54d820f4 205 Gene3D G3DSA:1.10.150.20 67 143 1.2E-25 T 14-10-2018 JV59_28585 671f20f23a0f184a04db367b54d820f4 205 Gene3D G3DSA:2.40.50.140 1 65 1.7E-27 T 14-10-2018 JV59_28585 671f20f23a0f184a04db367b54d820f4 205 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 205 31.603 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 JV59_34370 872e8e7278b8ca9599c111f7f170f8bf 438 SUPERFAMILY SSF109604 19 436 3.66E-80 T 14-10-2018 JV59_34370 872e8e7278b8ca9599c111f7f170f8bf 438 SMART SM00471 58 264 6.6E-8 T 14-10-2018 IPR003607 HD/PDEase domain JV59_34370 872e8e7278b8ca9599c111f7f170f8bf 438 Pfam PF13286 Phosphohydrolase-associated domain 343 433 8.6E-27 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain JV59_34370 872e8e7278b8ca9599c111f7f170f8bf 438 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 1 435 34.53 T 14-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 JV59_34370 872e8e7278b8ca9599c111f7f170f8bf 438 Pfam PF01966 HD domain 62 147 1.2E-7 T 14-10-2018 IPR006674 HD domain JV59_34370 872e8e7278b8ca9599c111f7f170f8bf 438 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 436 4.1E-127 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 JV59_39230 eea8f96b905189e02460ca626076e467 360 SUPERFAMILY SSF52540 1 343 1.28E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_39230 eea8f96b905189e02460ca626076e467 360 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 JV59_39230 eea8f96b905189e02460ca626076e467 360 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 360 97.806 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 JV59_39230 eea8f96b905189e02460ca626076e467 360 Gene3D G3DSA:3.40.50.300 8 332 1.8E-82 T 14-10-2018 JV59_39230 eea8f96b905189e02460ca626076e467 360 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 JV59_39230 eea8f96b905189e02460ca626076e467 360 Gene3D G3DSA:1.20.1050.90 121 298 1.8E-82 T 14-10-2018 JV59_39230 eea8f96b905189e02460ca626076e467 360 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 355 3.3E-37 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal JV59_39230 eea8f96b905189e02460ca626076e467 360 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 356 5.0E-119 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 JV59_29175 d611c3fc2b813256072fc8df69201b73 255 Gene3D G3DSA:3.30.460.10 6 125 1.7E-8 T 14-10-2018 JV59_29175 d611c3fc2b813256072fc8df69201b73 255 SUPERFAMILY SSF81301 10 90 5.18E-9 T 14-10-2018 JV59_36410 28d4ec43aa40e6a4dab1a3bfbbef4831 142 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JV59_36410 28d4ec43aa40e6a4dab1a3bfbbef4831 142 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.482 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JV59_36410 28d4ec43aa40e6a4dab1a3bfbbef4831 142 SUPERFAMILY SSF54919 1 140 2.75E-62 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JV59_36410 28d4ec43aa40e6a4dab1a3bfbbef4831 142 SMART SM00562 3 140 7.5E-93 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JV59_36410 28d4ec43aa40e6a4dab1a3bfbbef4831 142 Gene3D G3DSA:3.30.70.141 1 142 1.3E-61 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JV59_36410 28d4ec43aa40e6a4dab1a3bfbbef4831 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.9E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JV59_36410 28d4ec43aa40e6a4dab1a3bfbbef4831 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.9E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JV59_36410 28d4ec43aa40e6a4dab1a3bfbbef4831 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.9E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JV59_36410 28d4ec43aa40e6a4dab1a3bfbbef4831 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.9E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JV59_36410 28d4ec43aa40e6a4dab1a3bfbbef4831 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.9E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JV59_36410 28d4ec43aa40e6a4dab1a3bfbbef4831 142 Pfam PF00334 Nucleoside diphosphate kinase 4 138 2.0E-59 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JV59_21295 60897de86862b1ff44f5f3292985531b 168 SUPERFAMILY SSF52540 2 167 6.97E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_21295 60897de86862b1ff44f5f3292985531b 168 Gene3D G3DSA:3.40.50.300 1 167 2.9E-27 T 14-10-2018 JV59_21295 60897de86862b1ff44f5f3292985531b 168 Pfam PF13671 AAA domain 6 121 7.3E-13 T 14-10-2018 JV59_22645 6cbfa89dd6b35250d286b8a3456a29cd 467 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 15 419 3.8E-107 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 JV59_22645 6cbfa89dd6b35250d286b8a3456a29cd 467 TIGRFAM TIGR03173 pbuX: xanthine permease 19 424 3.4E-140 T 14-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 JV59_22645 6cbfa89dd6b35250d286b8a3456a29cd 467 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 340 360 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 JV59_22645 6cbfa89dd6b35250d286b8a3456a29cd 467 Pfam PF00860 Permease family 16 392 6.1E-90 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 JV59_34620 c03ac7ead8ad9544af5c70beb820d7f3 198 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 4 197 1.9E-61 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 JV59_34620 c03ac7ead8ad9544af5c70beb820d7f3 198 Gene3D G3DSA:2.50.20.10 16 197 4.7E-49 T 14-10-2018 JV59_34620 c03ac7ead8ad9544af5c70beb820d7f3 198 SUPERFAMILY SSF89392 20 197 1.45E-51 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX JV59_34620 c03ac7ead8ad9544af5c70beb820d7f3 198 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 5 196 31.477 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 JV59_34620 c03ac7ead8ad9544af5c70beb820d7f3 198 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 29 186 7.6E-55 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like JV59_31880 cf30b7ad6d1f08330736e8526e77da68 660 SUPERFAMILY SSF69279 18 189 1.42E-45 T 14-10-2018 JV59_31880 cf30b7ad6d1f08330736e8526e77da68 660 SUPERFAMILY SSF69255 361 446 1.2E-26 T 14-10-2018 JV59_31880 cf30b7ad6d1f08330736e8526e77da68 660 Gene3D G3DSA:2.30.110.50 22 333 5.6E-63 T 14-10-2018 JV59_31880 cf30b7ad6d1f08330736e8526e77da68 660 SUPERFAMILY SSF69279 210 356 8.84E-5 T 14-10-2018 JV59_31880 cf30b7ad6d1f08330736e8526e77da68 660 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 17 509 2.4E-132 T 14-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset JV59_31880 cf30b7ad6d1f08330736e8526e77da68 660 Pfam PF05954 Phage late control gene D protein (GPD) 31 334 6.9E-58 T 14-10-2018 JV59_31880 cf30b7ad6d1f08330736e8526e77da68 660 Gene3D G3DSA:3.55.50.10 103 194 5.6E-63 T 14-10-2018 JV59_31880 cf30b7ad6d1f08330736e8526e77da68 660 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 23 493 9.8E-99 T 14-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein JV59_31880 cf30b7ad6d1f08330736e8526e77da68 660 SUPERFAMILY SSF69349 436 578 2.82E-28 T 14-10-2018 JV59_31880 cf30b7ad6d1f08330736e8526e77da68 660 Gene3D G3DSA:3.30.1920.30 226 292 5.6E-63 T 14-10-2018 JV59_31880 cf30b7ad6d1f08330736e8526e77da68 660 Gene3D G3DSA:2.40.50.230 350 451 2.3E-36 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily JV59_01860 870df522e9926e429a2344909f051a28 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 457 8.9E-24 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JV59_01860 870df522e9926e429a2344909f051a28 470 Gene3D G3DSA:3.50.50.60 245 398 5.9E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_01860 870df522e9926e429a2344909f051a28 470 SUPERFAMILY SSF51971 145 399 8.83E-70 T 14-10-2018 JV59_01860 870df522e9926e429a2344909f051a28 470 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 2.2E-36 T 14-10-2018 JV59_01860 870df522e9926e429a2344909f051a28 470 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 2.2E-36 T 14-10-2018 JV59_01860 870df522e9926e429a2344909f051a28 470 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 2.2E-36 T 14-10-2018 JV59_01860 870df522e9926e429a2344909f051a28 470 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 2.2E-36 T 14-10-2018 JV59_01860 870df522e9926e429a2344909f051a28 470 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 2.2E-36 T 14-10-2018 JV59_01860 870df522e9926e429a2344909f051a28 470 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 470 9.3E-253 T 14-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 JV59_01860 870df522e9926e429a2344909f051a28 470 Gene3D G3DSA:1.10.1060.10 11 146 1.8E-35 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JV59_01860 870df522e9926e429a2344909f051a28 470 Gene3D G3DSA:3.50.50.60 147 233 7.7E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_01860 870df522e9926e429a2344909f051a28 470 SUPERFAMILY SSF46548 6 157 5.75E-41 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JV59_01860 870df522e9926e429a2344909f051a28 470 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 6.2E-39 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 JV59_35320 c2695b67484f2449d50f6301ac405324 196 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 156 190 7.1E-7 T 14-10-2018 IPR010177 Doubled CXXCH motif JV59_35320 c2695b67484f2449d50f6301ac405324 196 SUPERFAMILY SSF48695 22 193 1.78E-26 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily JV59_35320 c2695b67484f2449d50f6301ac405324 196 Gene3D G3DSA:1.10.1130.10 17 139 2.6E-6 T 14-10-2018 JV59_35320 c2695b67484f2449d50f6301ac405324 196 Gene3D G3DSA:3.90.10.10 140 196 1.2E-5 T 14-10-2018 JV59_35320 c2695b67484f2449d50f6301ac405324 196 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 43 190 1.5E-62 T 14-10-2018 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 JV59_35320 c2695b67484f2449d50f6301ac405324 196 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 153 189 3.7E-6 T 14-10-2018 IPR010177 Doubled CXXCH motif JV59_35320 c2695b67484f2449d50f6301ac405324 196 Pfam PF13435 Cytochrome c554 and c-prime 24 90 0.0011 T 14-10-2018 IPR023155 Cytochrome c-552/4 JV59_36705 4a65f5d04e8ea6329f98096d19aa92b1 263 Pfam PF01925 Sulfite exporter TauE/SafE 10 260 9.6E-51 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 JV59_29295 267ba47d862501f6b96033229cdf0b0a 242 Gene3D G3DSA:3.60.21.10 1 242 6.9E-44 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JV59_29295 267ba47d862501f6b96033229cdf0b0a 242 Pfam PF00149 Calcineurin-like phosphoesterase 3 189 4.9E-15 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 JV59_29295 267ba47d862501f6b96033229cdf0b0a 242 SUPERFAMILY SSF56300 3 238 3.24E-37 T 14-10-2018 JV59_33940 839f0829176ff326ae9716b6b1aea25f 972 SMART SM00843 902 967 1.2E-37 T 14-10-2018 IPR018541 FtsK gamma domain JV59_33940 839f0829176ff326ae9716b6b1aea25f 972 Gene3D G3DSA:3.40.50.300 582 884 1.4E-119 T 14-10-2018 JV59_33940 839f0829176ff326ae9716b6b1aea25f 972 Gene3D G3DSA:1.10.10.10 896 963 1.8E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_33940 839f0829176ff326ae9716b6b1aea25f 972 SUPERFAMILY SSF46785 902 967 6.17E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_33940 839f0829176ff326ae9716b6b1aea25f 972 SUPERFAMILY SSF52540 560 871 8.76E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_33940 839f0829176ff326ae9716b6b1aea25f 972 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 28 199 3.1E-40 T 14-10-2018 IPR025199 DNA translocase FtsK, 4TM region JV59_33940 839f0829176ff326ae9716b6b1aea25f 972 Gene3D G3DSA:3.30.980.40 477 581 2.4E-32 T 14-10-2018 JV59_33940 839f0829176ff326ae9716b6b1aea25f 972 Pfam PF01580 FtsK/SpoIIIE family 587 798 9.6E-71 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 JV59_33940 839f0829176ff326ae9716b6b1aea25f 972 Pfam PF09397 Ftsk gamma domain 904 964 7.3E-26 T 14-10-2018 IPR018541 FtsK gamma domain JV59_16410 f23a5029667442cba63e68c76b94be76 239 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_16410 f23a5029667442cba63e68c76b94be76 239 SUPERFAMILY SSF52540 4 231 6.84E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_16410 f23a5029667442cba63e68c76b94be76 239 SMART SM00382 28 209 2.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_16410 f23a5029667442cba63e68c76b94be76 239 PIRSF PIRSF039085 1 237 8.3E-99 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 JV59_16410 f23a5029667442cba63e68c76b94be76 239 Pfam PF00005 ABC transporter 19 161 4.8E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_16410 f23a5029667442cba63e68c76b94be76 239 Gene3D G3DSA:3.40.50.300 2 239 2.4E-79 T 14-10-2018 JV59_35990 83962d8f22157d4edd3f017a9463ee99 1206 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 8 1189 23.071 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 JV59_35990 83962d8f22157d4edd3f017a9463ee99 1206 Gene3D G3DSA:1.10.3170.10 158 350 3.4E-160 T 14-10-2018 JV59_35990 83962d8f22157d4edd3f017a9463ee99 1206 Gene3D G3DSA:3.90.320.10 898 1195 1.4E-101 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal JV59_35990 83962d8f22157d4edd3f017a9463ee99 1206 Pfam PF12705 PD-(D/E)XK nuclease superfamily 964 1171 6.0E-8 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type JV59_35990 83962d8f22157d4edd3f017a9463ee99 1206 SUPERFAMILY SSF52980 907 1189 2.04E-85 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JV59_35990 83962d8f22157d4edd3f017a9463ee99 1206 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 10 1188 0.0 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 JV59_35990 83962d8f22157d4edd3f017a9463ee99 1206 Gene3D G3DSA:3.40.50.300 10 437 3.4E-160 T 14-10-2018 JV59_35990 83962d8f22157d4edd3f017a9463ee99 1206 Pfam PF13361 UvrD-like helicase C-terminal domain 444 816 6.8E-19 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 JV59_35990 83962d8f22157d4edd3f017a9463ee99 1206 Gene3D G3DSA:1.10.486.10 587 735 8.7E-161 T 14-10-2018 JV59_35990 83962d8f22157d4edd3f017a9463ee99 1206 SUPERFAMILY SSF52540 16 849 4.94E-112 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_35990 83962d8f22157d4edd3f017a9463ee99 1206 Pfam PF00580 UvrD/REP helicase N-terminal domain 17 437 5.7E-61 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 JV59_35990 83962d8f22157d4edd3f017a9463ee99 1206 Gene3D G3DSA:3.40.50.300 446 852 8.7E-161 T 14-10-2018 JV59_39700 066134f57a5c3bf8b416c2d19e07d1e6 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 5.9E-18 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_39700 066134f57a5c3bf8b416c2d19e07d1e6 204 SUPERFAMILY SSF46689 18 91 2.34E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_39700 066134f57a5c3bf8b416c2d19e07d1e6 204 ProSitePatterns PS01081 TetR-type HTH domain signature. 36 67 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JV59_39700 066134f57a5c3bf8b416c2d19e07d1e6 204 Gene3D G3DSA:1.10.357.10 9 204 1.3E-76 T 14-10-2018 JV59_39700 066134f57a5c3bf8b416c2d19e07d1e6 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 2.1E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_39700 066134f57a5c3bf8b416c2d19e07d1e6 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 2.1E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_17320 c19397007bf299da1576377aeda280f3 637 Pfam PF00270 DEAD/DEAH box helicase 30 195 2.8E-50 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JV59_17320 c19397007bf299da1576377aeda280f3 637 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 550 41.558 T 14-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 JV59_17320 c19397007bf299da1576377aeda280f3 637 SMART SM00487 25 223 4.5E-62 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JV59_17320 c19397007bf299da1576377aeda280f3 637 Gene3D G3DSA:3.40.50.300 1 211 3.2E-74 T 14-10-2018 JV59_17320 c19397007bf299da1576377aeda280f3 637 SMART SM00490 259 340 6.5E-34 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_17320 c19397007bf299da1576377aeda280f3 637 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JV59_17320 c19397007bf299da1576377aeda280f3 637 Pfam PF03880 DbpA RNA binding domain 478 546 8.0E-16 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain JV59_17320 c19397007bf299da1576377aeda280f3 637 Gene3D G3DSA:3.40.50.300 215 433 6.2E-52 T 14-10-2018 JV59_17320 c19397007bf299da1576377aeda280f3 637 Pfam PF00271 Helicase conserved C-terminal domain 232 340 3.3E-29 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_17320 c19397007bf299da1576377aeda280f3 637 SUPERFAMILY SSF52540 74 361 1.13E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_17320 c19397007bf299da1576377aeda280f3 637 Gene3D G3DSA:3.30.70.330 479 549 2.1E-10 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily JV59_36240 2a0c8d76900cd2bfd9a8af358418fe76 339 SUPERFAMILY SSF51735 2 336 4.03E-98 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_36240 2a0c8d76900cd2bfd9a8af358418fe76 339 Gene3D G3DSA:3.90.25.10 194 329 1.5E-143 T 14-10-2018 JV59_36240 2a0c8d76900cd2bfd9a8af358418fe76 339 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 1.2E-138 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 JV59_36240 2a0c8d76900cd2bfd9a8af358418fe76 339 Gene3D G3DSA:3.40.50.720 3 274 1.5E-143 T 14-10-2018 JV59_36240 2a0c8d76900cd2bfd9a8af358418fe76 339 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 3.4E-59 T 14-10-2018 IPR016040 NAD(P)-binding domain JV59_36240 2a0c8d76900cd2bfd9a8af358418fe76 339 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 2.1E-5 T 14-10-2018 JV59_36240 2a0c8d76900cd2bfd9a8af358418fe76 339 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 2.1E-5 T 14-10-2018 JV59_36240 2a0c8d76900cd2bfd9a8af358418fe76 339 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 2.1E-5 T 14-10-2018 JV59_40135 d90a65c09e00c3a8cf29b48bf970e32d 108 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 32.191 T 14-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 JV59_40135 d90a65c09e00c3a8cf29b48bf970e32d 108 SMART SM00450 7 102 1.1E-18 T 14-10-2018 IPR001763 Rhodanese-like domain JV59_40135 d90a65c09e00c3a8cf29b48bf970e32d 108 Gene3D G3DSA:3.40.250.10 1 102 2.3E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JV59_40135 d90a65c09e00c3a8cf29b48bf970e32d 108 Pfam PF00581 Rhodanese-like domain 13 98 6.3E-12 T 14-10-2018 IPR001763 Rhodanese-like domain JV59_40135 d90a65c09e00c3a8cf29b48bf970e32d 108 SUPERFAMILY SSF52821 1 106 6.02E-30 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JV59_38565 344c9e45c8c6ba5b86f4ea8af202ac77 313 Gene3D G3DSA:3.40.50.720 3 307 1.4E-113 T 14-10-2018 JV59_38565 344c9e45c8c6ba5b86f4ea8af202ac77 313 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 313 45.454 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 JV59_38565 344c9e45c8c6ba5b86f4ea8af202ac77 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 4.8E-44 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JV59_38565 344c9e45c8c6ba5b86f4ea8af202ac77 313 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 312 1.6E-125 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 JV59_38565 344c9e45c8c6ba5b86f4ea8af202ac77 313 Gene3D G3DSA:3.90.25.10 173 295 1.4E-113 T 14-10-2018 JV59_38565 344c9e45c8c6ba5b86f4ea8af202ac77 313 SUPERFAMILY SSF51735 1 309 1.07E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_16060 09f9c348055b8125c6cd6170abe05543 196 Pfam PF13499 EF-hand domain pair 25 97 7.7E-8 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 JV59_16060 09f9c348055b8125c6cd6170abe05543 196 ProSitePatterns PS00018 EF-hand calcium-binding domain. 32 44 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site JV59_16060 09f9c348055b8125c6cd6170abe05543 196 ProSitePatterns PS00018 EF-hand calcium-binding domain. 178 190 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site JV59_16060 09f9c348055b8125c6cd6170abe05543 196 SUPERFAMILY SSF47473 26 191 7.27E-15 T 14-10-2018 IPR011992 EF-hand domain pair JV59_16060 09f9c348055b8125c6cd6170abe05543 196 SMART SM00054 23 51 0.039 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 JV59_16060 09f9c348055b8125c6cd6170abe05543 196 SMART SM00054 75 103 7.7 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 JV59_16060 09f9c348055b8125c6cd6170abe05543 196 SMART SM00054 107 135 94.0 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 JV59_16060 09f9c348055b8125c6cd6170abe05543 196 Gene3D G3DSA:1.10.238.10 105 194 3.6E-7 T 14-10-2018 JV59_16060 09f9c348055b8125c6cd6170abe05543 196 Gene3D G3DSA:1.10.238.10 15 104 1.1E-11 T 14-10-2018 JV59_39635 79f607cbfee66359b51e30839adc81ee 144 SUPERFAMILY SSF55729 1 128 8.65E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_39635 79f607cbfee66359b51e30839adc81ee 144 Gene3D G3DSA:3.40.630.30 4 139 2.2E-12 T 14-10-2018 JV59_39635 79f607cbfee66359b51e30839adc81ee 144 Pfam PF00583 Acetyltransferase (GNAT) family 35 104 4.9E-7 T 14-10-2018 IPR000182 GNAT domain JV59_19795 591510ef7deaba0b0b01cecad88209eb 666 Gene3D G3DSA:1.10.287.950 335 666 2.7E-61 T 14-10-2018 JV59_19795 591510ef7deaba0b0b01cecad88209eb 666 SMART SM00304 335 388 2.1E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_19795 591510ef7deaba0b0b01cecad88209eb 666 SMART SM00283 403 664 4.6E-49 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_19795 591510ef7deaba0b0b01cecad88209eb 666 SUPERFAMILY SSF58104 361 665 4.32E-63 T 14-10-2018 JV59_19795 591510ef7deaba0b0b01cecad88209eb 666 Pfam PF12729 Four helix bundle sensory module for signal transduction 2 161 4.0E-8 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain JV59_19795 591510ef7deaba0b0b01cecad88209eb 666 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 471 629 2.9E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_30700 3ca862c689473a846b3c9ad0b0422520 495 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site JV59_30700 3ca862c689473a846b3c9ad0b0422520 495 Pfam PF02954 Bacterial regulatory protein, Fis family 444 480 9.2E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_30700 3ca862c689473a846b3c9ad0b0422520 495 SMART SM00448 3 114 2.7E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_30700 3ca862c689473a846b3c9ad0b0422520 495 Pfam PF00158 Sigma-54 interaction domain 143 309 2.9E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JV59_30700 3ca862c689473a846b3c9ad0b0422520 495 Gene3D G3DSA:1.10.8.60 314 395 6.6E-26 T 14-10-2018 JV59_30700 3ca862c689473a846b3c9ad0b0422520 495 Gene3D G3DSA:1.10.10.60 439 481 5.6E-8 T 14-10-2018 JV59_30700 3ca862c689473a846b3c9ad0b0422520 495 SUPERFAMILY SSF46689 437 485 3.49E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_30700 3ca862c689473a846b3c9ad0b0422520 495 SUPERFAMILY SSF52540 142 385 4.19E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_30700 3ca862c689473a846b3c9ad0b0422520 495 Gene3D G3DSA:3.40.50.2300 1 131 1.7E-26 T 14-10-2018 JV59_30700 3ca862c689473a846b3c9ad0b0422520 495 Pfam PF00072 Response regulator receiver domain 5 114 1.2E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_30700 3ca862c689473a846b3c9ad0b0422520 495 SMART SM00382 162 304 2.6E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_30700 3ca862c689473a846b3c9ad0b0422520 495 SUPERFAMILY SSF52172 3 186 9.53E-33 T 14-10-2018 IPR011006 CheY-like superfamily JV59_30700 3ca862c689473a846b3c9ad0b0422520 495 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JV59_30700 3ca862c689473a846b3c9ad0b0422520 495 Gene3D G3DSA:3.40.50.300 132 313 1.5E-63 T 14-10-2018 JV59_17325 6e3d0e09db4debd82ffc82195cf24dcf 385 Gene3D G3DSA:3.50.50.60 147 383 4.4E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_17325 6e3d0e09db4debd82ffc82195cf24dcf 385 Gene3D G3DSA:3.50.50.60 27 146 9.5E-17 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_17325 6e3d0e09db4debd82ffc82195cf24dcf 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 33 55 1.0E-5 T 14-10-2018 JV59_17325 6e3d0e09db4debd82ffc82195cf24dcf 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 345 360 1.0E-5 T 14-10-2018 JV59_17325 6e3d0e09db4debd82ffc82195cf24dcf 385 SUPERFAMILY SSF54373 226 327 3.4E-13 T 14-10-2018 JV59_17325 6e3d0e09db4debd82ffc82195cf24dcf 385 SUPERFAMILY SSF51905 30 379 6.91E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_17325 6e3d0e09db4debd82ffc82195cf24dcf 385 Pfam PF13450 NAD(P)-binding Rossmann-like domain 36 91 6.6E-12 T 14-10-2018 JV59_17325 6e3d0e09db4debd82ffc82195cf24dcf 385 Pfam PF01593 Flavin containing amine oxidoreductase 155 375 7.3E-28 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 JV59_34385 e59cfb824500d9ffbe0e74fa3ea504a8 188 Gene3D G3DSA:1.20.1540.10 1 184 4.5E-19 T 14-10-2018 IPR035952 Rhomboid-like superfamily JV59_34385 e59cfb824500d9ffbe0e74fa3ea504a8 188 Pfam PF01694 Rhomboid family 34 175 7.1E-16 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 JV59_34385 e59cfb824500d9ffbe0e74fa3ea504a8 188 SUPERFAMILY SSF144091 3 178 1.57E-28 T 14-10-2018 JV59_34385 e59cfb824500d9ffbe0e74fa3ea504a8 188 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 24 171 8.3E-50 T 14-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria JV59_01455 1241740bc9a3afd38eb7dcd244fa7707 302 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 8 302 61.321 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 JV59_01455 1241740bc9a3afd38eb7dcd244fa7707 302 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 13 302 8.8E-117 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 JV59_01455 1241740bc9a3afd38eb7dcd244fa7707 302 Gene3D G3DSA:1.10.443.10 114 296 5.6E-73 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JV59_01455 1241740bc9a3afd38eb7dcd244fa7707 302 SUPERFAMILY SSF56349 12 293 4.12E-58 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JV59_01455 1241740bc9a3afd38eb7dcd244fa7707 302 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 94 1.5E-20 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 JV59_01455 1241740bc9a3afd38eb7dcd244fa7707 302 Gene3D G3DSA:1.10.150.130 8 102 3.1E-24 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal JV59_01455 1241740bc9a3afd38eb7dcd244fa7707 302 Pfam PF00589 Phage integrase family 117 288 4.5E-53 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JV59_01455 1241740bc9a3afd38eb7dcd244fa7707 302 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 10 302 56.343 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD JV59_29550 9fffb40b043f25e624fd54b383448d89 185 SUPERFAMILY SSF159594 39 184 1.73E-25 T 14-10-2018 JV59_29550 9fffb40b043f25e624fd54b383448d89 185 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 31 181 4.9E-28 T 14-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component JV59_29550 9fffb40b043f25e624fd54b383448d89 185 Gene3D G3DSA:3.40.50.10610 25 184 3.4E-6 T 14-10-2018 JV59_31670 ac81ad866f51e60b7ea4f324b22e80aa 1613 SUPERFAMILY SSF53223 754 940 6.14E-26 T 14-10-2018 JV59_31670 ac81ad866f51e60b7ea4f324b22e80aa 1613 SUPERFAMILY SSF51735 945 1278 1.05E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_31670 ac81ad866f51e60b7ea4f324b22e80aa 1613 PIRSF PIRSF036761 1 1610 0.0 T 14-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 JV59_31670 ac81ad866f51e60b7ea4f324b22e80aa 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1603 0.0 T 14-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 JV59_20665 0c089b4304567c1f34169a0ad9bcabf1 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 127 2.2E-11 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JV59_20665 0c089b4304567c1f34169a0ad9bcabf1 129 Gene3D G3DSA:3.10.180.10 1 129 2.7E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_20665 0c089b4304567c1f34169a0ad9bcabf1 129 SUPERFAMILY SSF54593 1 128 9.67E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_25735 70e9e041e02ebf36c61700f6990f074c 194 SUPERFAMILY SSF103039 4 191 1.83E-28 T 14-10-2018 IPR028976 CheC-like superfamily JV59_25735 70e9e041e02ebf36c61700f6990f074c 194 Gene3D G3DSA:3.40.1550.10 4 191 1.3E-32 T 14-10-2018 IPR028976 CheC-like superfamily JV59_32620 03d0b93885e1e8d79d0be299a04d8379 180 SUPERFAMILY SSF55729 14 158 9.59E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_32620 03d0b93885e1e8d79d0be299a04d8379 180 Gene3D G3DSA:3.40.630.30 12 169 1.2E-29 T 14-10-2018 JV59_32620 03d0b93885e1e8d79d0be299a04d8379 180 Pfam PF13302 Acetyltransferase (GNAT) domain 17 154 9.5E-21 T 14-10-2018 IPR000182 GNAT domain JV59_35115 cd20ef5d52efb8b401d891136a280941 87 Pfam PF08891 YfcL protein 4 84 4.7E-31 T 14-10-2018 IPR014987 Uncharacterised protein family YfcL JV59_17960 63bdedf0e9e6a55449ab51df8bb6a928 73 Pfam PF00313 'Cold-shock' DNA-binding domain 1 65 9.3E-7 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JV59_17960 63bdedf0e9e6a55449ab51df8bb6a928 73 SUPERFAMILY SSF50249 2 66 1.77E-7 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_17960 63bdedf0e9e6a55449ab51df8bb6a928 73 Gene3D G3DSA:2.40.50.140 1 69 8.5E-12 T 14-10-2018 JV59_25700 828c3b1151f4ecd9a65a03bc4df9441f 476 SUPERFAMILY SSF53383 12 474 5.64E-128 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_25700 828c3b1151f4ecd9a65a03bc4df9441f 476 Gene3D G3DSA:3.40.640.10 63 335 1.5E-195 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_25700 828c3b1151f4ecd9a65a03bc4df9441f 476 Pfam PF01212 Beta-eliminating lyase 51 439 4.1E-83 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 JV59_25700 828c3b1151f4ecd9a65a03bc4df9441f 476 Gene3D G3DSA:3.90.1150.10 13 469 1.5E-195 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_25700 828c3b1151f4ecd9a65a03bc4df9441f 476 PIRSF PIRSF001386 4 475 1.3E-201 T 14-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 JV59_32345 609313bbcc12cc16ccc7239c05da9a82 430 Gene3D G3DSA:3.40.50.300 1 395 7.0E-27 T 14-10-2018 JV59_32345 609313bbcc12cc16ccc7239c05da9a82 430 Pfam PF13175 AAA ATPase domain 1 368 1.4E-22 T 14-10-2018 JV59_32345 609313bbcc12cc16ccc7239c05da9a82 430 SUPERFAMILY SSF52540 1 386 2.07E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_32345 609313bbcc12cc16ccc7239c05da9a82 430 PIRSF PIRSF029347 238 409 1.3E-5 T 14-10-2018 IPR014555 RecF-like JV59_32345 609313bbcc12cc16ccc7239c05da9a82 430 PIRSF PIRSF029347 1 90 1.2E-10 T 14-10-2018 IPR014555 RecF-like JV59_32205 174f5cbf34e4281d57da62869bea3762 126 Pfam PF06995 Phage P2 GpU 7 119 2.2E-10 T 14-10-2018 IPR009734 Myoviridae, GpU JV59_17420 68ddb566067d0f5e98d531ba357f5878 373 Gene3D G3DSA:2.40.50.140 287 344 7.6E-50 T 14-10-2018 JV59_17420 68ddb566067d0f5e98d531ba357f5878 373 Pfam PF00005 ABC transporter 20 161 9.3E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_17420 68ddb566067d0f5e98d531ba357f5878 373 SUPERFAMILY SSF50331 236 363 2.14E-32 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal JV59_17420 68ddb566067d0f5e98d531ba357f5878 373 SUPERFAMILY SSF52540 4 244 2.99E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_17420 68ddb566067d0f5e98d531ba357f5878 373 SMART SM00382 28 210 1.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_17420 68ddb566067d0f5e98d531ba357f5878 373 Pfam PF08402 TOBE domain 281 353 1.5E-10 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 JV59_17420 68ddb566067d0f5e98d531ba357f5878 373 Gene3D G3DSA:2.40.50.100 239 361 7.6E-50 T 14-10-2018 JV59_17420 68ddb566067d0f5e98d531ba357f5878 373 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_17420 68ddb566067d0f5e98d531ba357f5878 373 Gene3D G3DSA:3.40.50.300 1 238 1.4E-75 T 14-10-2018 JV59_22110 cd04586c1e430c20897851b8d9e4af12 289 PIRSF PIRSF037442 1 286 4.1E-76 T 14-10-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 JV59_22110 cd04586c1e430c20897851b8d9e4af12 289 SUPERFAMILY SSF53474 4 264 7.19E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_22110 cd04586c1e430c20897851b8d9e4af12 289 Pfam PF12146 Serine aminopeptidase, S33 42 116 4.6E-12 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 JV59_22110 cd04586c1e430c20897851b8d9e4af12 289 Gene3D G3DSA:3.40.50.1820 2 261 4.4E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_27150 170880c228bdfaebd5e62be5bee844e7 245 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 7 245 27.26 T 14-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 JV59_27150 170880c228bdfaebd5e62be5bee844e7 245 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 13 229 3.3E-38 T 14-10-2018 JV59_21040 9a297651856182f375ee85df37e9e893 292 Pfam PF03547 Membrane transport protein 148 284 4.4E-11 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 JV59_21040 9a297651856182f375ee85df37e9e893 292 Pfam PF03547 Membrane transport protein 6 140 1.7E-6 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 JV59_16805 3f6e83f6dedb024234be354c87bcad9e 583 SUPERFAMILY SSF161098 397 561 5.23E-15 T 14-10-2018 IPR035906 MetI-like superfamily JV59_16805 3f6e83f6dedb024234be354c87bcad9e 583 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 142 318 1.6E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_16805 3f6e83f6dedb024234be354c87bcad9e 583 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 417 582 1.6E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_16805 3f6e83f6dedb024234be354c87bcad9e 583 SUPERFAMILY SSF161098 114 306 3.05E-8 T 14-10-2018 IPR035906 MetI-like superfamily JV59_16805 3f6e83f6dedb024234be354c87bcad9e 583 Gene3D G3DSA:1.10.3720.10 104 318 6.6E-11 T 14-10-2018 IPR035906 MetI-like superfamily JV59_16805 3f6e83f6dedb024234be354c87bcad9e 583 Gene3D G3DSA:1.10.3720.10 394 583 4.5E-11 T 14-10-2018 IPR035906 MetI-like superfamily JV59_27765 5850b13b54f81d38707ecce1b406a947 275 Gene3D G3DSA:1.20.1330.10 183 234 3.5E-33 T 14-10-2018 JV59_27765 5850b13b54f81d38707ecce1b406a947 275 Gene3D G3DSA:1.20.1330.10 45 165 1.1E-52 T 14-10-2018 JV59_27765 5850b13b54f81d38707ecce1b406a947 275 Gene3D G3DSA:1.20.58.1830 7 33 1.1E-52 T 14-10-2018 JV59_27765 5850b13b54f81d38707ecce1b406a947 275 Gene3D G3DSA:1.20.58.1830 240 274 3.5E-33 T 14-10-2018 JV59_27765 5850b13b54f81d38707ecce1b406a947 275 PRINTS PR00207 Flagellin signature 111 134 8.5E-18 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JV59_27765 5850b13b54f81d38707ecce1b406a947 275 PRINTS PR00207 Flagellin signature 76 95 8.5E-18 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JV59_27765 5850b13b54f81d38707ecce1b406a947 275 PRINTS PR00207 Flagellin signature 37 54 8.5E-18 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JV59_27765 5850b13b54f81d38707ecce1b406a947 275 SUPERFAMILY SSF64518 1 275 5.89E-74 T 14-10-2018 JV59_27765 5850b13b54f81d38707ecce1b406a947 275 Pfam PF00700 Bacterial flagellin C-terminal helical region 190 274 2.5E-27 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JV59_27765 5850b13b54f81d38707ecce1b406a947 275 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 142 2.7E-36 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JV59_00355 e099e2e9d32d9b225d5c6c4f4883af91 370 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JV59_00355 e099e2e9d32d9b225d5c6c4f4883af91 370 Pfam PF13484 4Fe-4S double cluster binding domain 189 252 1.4E-19 T 14-10-2018 JV59_00355 e099e2e9d32d9b225d5c6c4f4883af91 370 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 2.1E-23 T 14-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 JV59_00355 e099e2e9d32d9b225d5c6c4f4883af91 370 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 311 50.337 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 JV59_00355 e099e2e9d32d9b225d5c6c4f4883af91 370 SUPERFAMILY SSF54862 165 314 9.63E-19 T 14-10-2018 JV59_00355 e099e2e9d32d9b225d5c6c4f4883af91 370 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 344 8.0E-151 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 JV59_18725 ab8bf2ed36a57c2be00fc5d980a1bc2d 316 TIGRFAM TIGR00874 talAB: transaldolase 3 316 1.1E-154 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 JV59_18725 ab8bf2ed36a57c2be00fc5d980a1bc2d 316 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 JV59_18725 ab8bf2ed36a57c2be00fc5d980a1bc2d 316 Gene3D G3DSA:3.20.20.70 2 316 1.4E-138 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_18725 ab8bf2ed36a57c2be00fc5d980a1bc2d 316 Hamap MF_00492 Transaldolase [tal]. 2 316 50.885 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 JV59_18725 ab8bf2ed36a57c2be00fc5d980a1bc2d 316 SUPERFAMILY SSF51569 1 315 9.84E-114 T 14-10-2018 JV59_18725 ab8bf2ed36a57c2be00fc5d980a1bc2d 316 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 JV59_18725 ab8bf2ed36a57c2be00fc5d980a1bc2d 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 312 3.9E-101 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 JV59_24685 79c9c02d58f7a4ce910d5038331f0c0b 723 Gene3D G3DSA:3.40.50.300 449 690 1.6E-8 T 14-10-2018 JV59_24685 79c9c02d58f7a4ce910d5038331f0c0b 723 SUPERFAMILY SSF52540 19 685 1.15E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_24685 79c9c02d58f7a4ce910d5038331f0c0b 723 Pfam PF13245 AAA domain 20 276 9.7E-22 T 14-10-2018 JV59_24685 79c9c02d58f7a4ce910d5038331f0c0b 723 Gene3D G3DSA:3.40.50.300 190 315 7.0E-12 T 14-10-2018 JV59_24685 79c9c02d58f7a4ce910d5038331f0c0b 723 Gene3D G3DSA:3.40.50.300 9 142 5.9E-17 T 14-10-2018 JV59_36005 73101b0a0dab6c931cf55356dd0033ee 295 Gene3D G3DSA:1.10.10.10 4 91 2.3E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_36005 73101b0a0dab6c931cf55356dd0033ee 295 Gene3D G3DSA:3.40.190.290 94 294 4.5E-34 T 14-10-2018 JV59_36005 73101b0a0dab6c931cf55356dd0033ee 295 SUPERFAMILY SSF46785 5 113 7.61E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_36005 73101b0a0dab6c931cf55356dd0033ee 295 SUPERFAMILY SSF53850 92 294 2.64E-39 T 14-10-2018 JV59_36005 73101b0a0dab6c931cf55356dd0033ee 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_36005 73101b0a0dab6c931cf55356dd0033ee 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_36005 73101b0a0dab6c931cf55356dd0033ee 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_36005 73101b0a0dab6c931cf55356dd0033ee 295 Pfam PF03466 LysR substrate binding domain 90 293 1.0E-45 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_36005 73101b0a0dab6c931cf55356dd0033ee 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.3E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_26725 f783de4c3a21b9c87abd0715a99c8478 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 2.3E-118 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 JV59_26725 f783de4c3a21b9c87abd0715a99c8478 239 Pfam PF01048 Phosphorylase superfamily 15 218 2.6E-40 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 JV59_26725 f783de4c3a21b9c87abd0715a99c8478 239 Gene3D G3DSA:3.40.50.1580 1 238 1.1E-75 T 14-10-2018 JV59_26725 f783de4c3a21b9c87abd0715a99c8478 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.397 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 JV59_26725 f783de4c3a21b9c87abd0715a99c8478 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 JV59_26725 f783de4c3a21b9c87abd0715a99c8478 239 SUPERFAMILY SSF53167 3 234 2.36E-92 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 JV59_16530 5b9a0cf81ac09d1978111b9c2203ea4c 506 SUPERFAMILY SSF52467 197 337 5.06E-17 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JV59_16530 5b9a0cf81ac09d1978111b9c2203ea4c 506 SUPERFAMILY SSF52518 370 439 3.5E-6 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_16530 5b9a0cf81ac09d1978111b9c2203ea4c 506 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 202 308 7.7E-13 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 JV59_16530 5b9a0cf81ac09d1978111b9c2203ea4c 506 Gene3D G3DSA:3.40.50.1220 206 355 2.2E-21 T 14-10-2018 JV59_16530 5b9a0cf81ac09d1978111b9c2203ea4c 506 Gene3D G3DSA:3.40.50.970 356 439 2.2E-21 T 14-10-2018 JV59_26820 86d30492819c62ca948cff297876d232 154 Gene3D G3DSA:3.40.50.2020 1 152 3.2E-41 T 14-10-2018 JV59_26820 86d30492819c62ca948cff297876d232 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 37.951 T 14-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 JV59_26820 86d30492819c62ca948cff297876d232 154 Pfam PF00156 Phosphoribosyl transferase domain 19 145 3.0E-13 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 JV59_26820 86d30492819c62ca948cff297876d232 154 SUPERFAMILY SSF53271 5 147 2.41E-28 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like JV59_30575 c1fe4fafd45395c7d78f6e40981a3cee 210 SMART SM00862 32 105 9.2E-8 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_30575 c1fe4fafd45395c7d78f6e40981a3cee 210 Gene3D G3DSA:1.10.10.10 13 122 2.8E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_30575 c1fe4fafd45395c7d78f6e40981a3cee 210 SUPERFAMILY SSF46894 22 106 7.65E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_30575 c1fe4fafd45395c7d78f6e40981a3cee 210 Pfam PF00486 Transcriptional regulatory protein, C terminal 35 105 2.3E-12 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_33920 c16f79cb578e08c35d869c556e218776 389 Gene3D G3DSA:3.40.1350.10 251 376 4.0E-77 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 JV59_33920 c16f79cb578e08c35d869c556e218776 389 Pfam PF09002 Domain of unknown function (DUF1887) 1 379 1.4E-165 T 14-10-2018 IPR015093 Protein of unknown function DUF1887 JV59_33920 c16f79cb578e08c35d869c556e218776 389 SUPERFAMILY SSF52980 1 382 2.17E-118 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JV59_33920 c16f79cb578e08c35d869c556e218776 389 Gene3D G3DSA:1.10.10.680 169 250 4.0E-77 T 14-10-2018 JV59_33920 c16f79cb578e08c35d869c556e218776 389 Gene3D G3DSA:3.40.50.10770 1 140 2.3E-57 T 14-10-2018 JV59_26140 172c44b6db02fe4c0a08641ec7d7996e 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 9.0E-24 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26140 172c44b6db02fe4c0a08641ec7d7996e 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26140 172c44b6db02fe4c0a08641ec7d7996e 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 6.2E-38 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26140 172c44b6db02fe4c0a08641ec7d7996e 75 Pfam PF01084 Ribosomal protein S18 19 68 2.8E-25 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26140 172c44b6db02fe4c0a08641ec7d7996e 75 Gene3D G3DSA:4.10.640.10 20 75 7.8E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26140 172c44b6db02fe4c0a08641ec7d7996e 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.42 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26140 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26140 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26140 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26140 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26140 172c44b6db02fe4c0a08641ec7d7996e 75 SUPERFAMILY SSF46911 3 74 2.49E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_35035 a2c8bd6df082c0275c595a62999398b2 75 Pfam PF04023 FeoA domain 1 74 2.6E-18 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 JV59_35035 a2c8bd6df082c0275c595a62999398b2 75 SMART SM00899 1 74 5.6E-22 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 JV59_35035 a2c8bd6df082c0275c595a62999398b2 75 Gene3D G3DSA:2.30.30.90 4 75 1.7E-22 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain JV59_35035 a2c8bd6df082c0275c595a62999398b2 75 SUPERFAMILY SSF50037 4 73 1.6E-18 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal JV59_34825 d1b6cd44d07db3400c4a5d7bf2e5cfc4 109 Gene3D G3DSA:3.30.1310.10 1 109 6.4E-48 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily JV59_34825 d1b6cd44d07db3400c4a5d7bf2e5cfc4 109 SUPERFAMILY SSF82607 11 103 8.89E-37 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily JV59_34825 d1b6cd44d07db3400c4a5d7bf2e5cfc4 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.604 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family JV59_34825 d1b6cd44d07db3400c4a5d7bf2e5cfc4 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 6.7E-40 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family JV59_34825 d1b6cd44d07db3400c4a5d7bf2e5cfc4 109 PIRSF PIRSF004555 3 109 7.3E-40 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family JV59_34825 d1b6cd44d07db3400c4a5d7bf2e5cfc4 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 1.4E-35 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family JV59_34950 e966bc757a43b7c5e73110af06cf056a 336 PIRSF PIRSF020479 5 336 4.2E-118 T 14-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like JV59_34950 e966bc757a43b7c5e73110af06cf056a 336 SUPERFAMILY SSF50341 188 324 4.19E-14 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 JV59_34950 e966bc757a43b7c5e73110af06cf056a 336 Pfam PF01584 CheW-like domain 192 324 4.0E-14 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JV59_34950 e966bc757a43b7c5e73110af06cf056a 336 SMART SM00260 188 322 6.5E-4 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JV59_40005 a8b3f1a709cc9caacff4f0728d0035f9 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 2.2E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_40005 a8b3f1a709cc9caacff4f0728d0035f9 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 166 2.2E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_40005 a8b3f1a709cc9caacff4f0728d0035f9 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 196 209 2.2E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_40005 a8b3f1a709cc9caacff4f0728d0035f9 240 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 96 201 2.1E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_40005 a8b3f1a709cc9caacff4f0728d0035f9 240 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 206 1.8E-14 T 14-10-2018 JV59_40005 a8b3f1a709cc9caacff4f0728d0035f9 240 Gene3D G3DSA:1.20.120.1600 24 110 6.4E-61 T 14-10-2018 JV59_40005 a8b3f1a709cc9caacff4f0728d0035f9 240 Gene3D G3DSA:3.40.50.1000 12 231 6.4E-61 T 14-10-2018 IPR023214 HAD superfamily JV59_40005 a8b3f1a709cc9caacff4f0728d0035f9 240 SUPERFAMILY SSF56784 10 239 1.5E-38 T 14-10-2018 IPR036412 HAD-like superfamily JV59_20135 8b15609ae774ef7b56d6b730cb309fd5 622 Gene3D G3DSA:3.30.450.20 49 265 1.2E-79 T 14-10-2018 JV59_20135 8b15609ae774ef7b56d6b730cb309fd5 622 SMART SM00304 373 447 35.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_20135 8b15609ae774ef7b56d6b730cb309fd5 622 SMART SM00304 291 345 1.5E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_20135 8b15609ae774ef7b56d6b730cb309fd5 622 Pfam PF02743 Cache domain 33 254 5.0E-31 T 14-10-2018 IPR033479 Double Cache domain 1 JV59_20135 8b15609ae774ef7b56d6b730cb309fd5 622 Pfam PF00672 HAMP domain 293 342 2.3E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_20135 8b15609ae774ef7b56d6b730cb309fd5 622 SMART SM00283 360 621 1.8E-77 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_20135 8b15609ae774ef7b56d6b730cb309fd5 622 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 427 588 1.9E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_20135 8b15609ae774ef7b56d6b730cb309fd5 622 Gene3D G3DSA:1.10.287.950 291 622 1.0E-68 T 14-10-2018 JV59_20135 8b15609ae774ef7b56d6b730cb309fd5 622 SUPERFAMILY SSF58104 313 622 3.92E-74 T 14-10-2018 JV59_20135 8b15609ae774ef7b56d6b730cb309fd5 622 SUPERFAMILY SSF103190 87 182 2.56E-18 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JV59_20135 8b15609ae774ef7b56d6b730cb309fd5 622 Gene3D G3DSA:3.30.450.20 62 172 1.2E-79 T 14-10-2018 JV59_34050 709703bf94728b60cc393abb0f00b6d0 393 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 26 214 5.4E-39 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal JV59_34050 709703bf94728b60cc393abb0f00b6d0 393 Gene3D G3DSA:2.70.50.50 26 219 3.8E-66 T 14-10-2018 JV59_34050 709703bf94728b60cc393abb0f00b6d0 393 Gene3D G3DSA:2.10.10.20 349 393 1.5E-18 T 14-10-2018 JV59_34050 709703bf94728b60cc393abb0f00b6d0 393 SMART SM00495 350 393 6.5E-10 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_34050 709703bf94728b60cc393abb0f00b6d0 393 SUPERFAMILY SSF81296 26 217 1.4E-49 T 14-10-2018 IPR014756 Immunoglobulin E-set JV59_34050 709703bf94728b60cc393abb0f00b6d0 393 SUPERFAMILY SSF51055 343 390 1.44E-13 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_33550 1c6572ff01e757f9c63356a0a30b13ad 228 Gene3D G3DSA:1.10.340.30 37 164 5.2E-20 T 14-10-2018 JV59_33550 1c6572ff01e757f9c63356a0a30b13ad 228 SUPERFAMILY SSF48150 39 184 9.26E-39 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 JV59_33550 1c6572ff01e757f9c63356a0a30b13ad 228 Pfam PF03352 Methyladenine glycosylase 47 135 1.1E-16 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 JV59_31810 865c4a5f77c5fbe3d2a08067f66939b3 434 Gene3D G3DSA:1.20.1600.10 22 423 8.6E-83 T 14-10-2018 JV59_31810 865c4a5f77c5fbe3d2a08067f66939b3 434 Pfam PF02321 Outer membrane efflux protein 24 210 5.6E-24 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 JV59_31810 865c4a5f77c5fbe3d2a08067f66939b3 434 Pfam PF02321 Outer membrane efflux protein 231 414 6.1E-29 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 JV59_31810 865c4a5f77c5fbe3d2a08067f66939b3 434 SUPERFAMILY SSF56954 23 426 9.16E-87 T 14-10-2018 JV59_31810 865c4a5f77c5fbe3d2a08067f66939b3 434 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 20 428 1.6E-120 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 JV59_20360 bd82f95dd2a3d12325fb334143060b33 609 Pfam PF00083 Sugar (and other) transporter 43 150 1.4E-6 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 JV59_20360 bd82f95dd2a3d12325fb334143060b33 609 Gene3D G3DSA:1.20.1250.20 6 191 1.4E-13 T 14-10-2018 JV59_20360 bd82f95dd2a3d12325fb334143060b33 609 Pfam PF07690 Major Facilitator Superfamily 206 409 2.5E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_20360 bd82f95dd2a3d12325fb334143060b33 609 SUPERFAMILY SSF103473 8 384 9.59E-37 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_20360 bd82f95dd2a3d12325fb334143060b33 609 Gene3D G3DSA:1.20.1250.20 196 459 1.3E-19 T 14-10-2018 JV59_18635 7c3be8bf41542a262eca08eb23380ccb 376 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 267 351 5.8E-10 T 14-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain JV59_18635 7c3be8bf41542a262eca08eb23380ccb 376 SUPERFAMILY SSF56300 1 320 5.21E-59 T 14-10-2018 JV59_18635 7c3be8bf41542a262eca08eb23380ccb 376 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 243 2.1E-57 T 14-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 JV59_18635 7c3be8bf41542a262eca08eb23380ccb 376 Pfam PF00149 Calcineurin-like phosphoesterase 1 217 3.6E-18 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 JV59_18635 7c3be8bf41542a262eca08eb23380ccb 376 Gene3D G3DSA:3.60.21.10 1 264 1.2E-80 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JV59_16000 7ab857a2c80644ea4757f34bb6ac3c10 321 PIRSF PIRSF001439 1 319 7.9E-62 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 JV59_16000 7ab857a2c80644ea4757f34bb6ac3c10 321 Gene3D G3DSA:3.40.50.720 119 302 1.9E-80 T 14-10-2018 JV59_16000 7ab857a2c80644ea4757f34bb6ac3c10 321 SUPERFAMILY SSF51735 1 316 6.66E-84 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_16000 7ab857a2c80644ea4757f34bb6ac3c10 321 Gene3D G3DSA:3.30.1780.10 5 316 1.9E-80 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 JV59_16000 7ab857a2c80644ea4757f34bb6ac3c10 321 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 30 315 4.5E-57 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 JV59_01920 557fbd8a1352b269f9df6c57962a35a9 193 Pfam PF05728 Uncharacterised protein family (UPF0227) 6 191 2.2E-72 T 14-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA JV59_01920 557fbd8a1352b269f9df6c57962a35a9 193 SUPERFAMILY SSF53474 5 191 4.23E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_01920 557fbd8a1352b269f9df6c57962a35a9 193 Gene3D G3DSA:3.40.50.1820 5 193 4.2E-62 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_39850 3a6e97183fa14aaa0ae3c36424a891b4 165 SUPERFAMILY SSF52833 1 163 7.04E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_39850 3a6e97183fa14aaa0ae3c36424a891b4 165 Hamap MF_00269 Thiol peroxidase [tpx]. 3 165 34.775 T 14-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 JV59_39850 3a6e97183fa14aaa0ae3c36424a891b4 165 Pfam PF08534 Redoxin 20 162 4.0E-23 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 JV59_39850 3a6e97183fa14aaa0ae3c36424a891b4 165 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 14-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 JV59_39850 3a6e97183fa14aaa0ae3c36424a891b4 165 Gene3D G3DSA:3.40.30.10 1 165 1.2E-42 T 14-10-2018 JV59_01600 6b01899b325838bd664eeb5198f45606 343 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_01600 6b01899b325838bd664eeb5198f45606 343 Gene3D G3DSA:3.40.50.300 2 308 3.2E-74 T 14-10-2018 JV59_01600 6b01899b325838bd664eeb5198f45606 343 SMART SM00382 30 215 1.4E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_01600 6b01899b325838bd664eeb5198f45606 343 SUPERFAMILY SSF52540 5 245 1.24E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_01600 6b01899b325838bd664eeb5198f45606 343 SUPERFAMILY SSF50331 270 343 1.47E-7 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal JV59_01600 6b01899b325838bd664eeb5198f45606 343 Pfam PF08402 TOBE domain 277 342 1.7E-6 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 JV59_01600 6b01899b325838bd664eeb5198f45606 343 Pfam PF00005 ABC transporter 21 165 1.5E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_28030 e352c1ce59d3ad2b8a6c894c3df291d1 111 SUPERFAMILY SSF52833 1 102 2.5E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_28030 e352c1ce59d3ad2b8a6c894c3df291d1 111 Pfam PF00462 Glutaredoxin 16 80 7.8E-17 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 JV59_28030 e352c1ce59d3ad2b8a6c894c3df291d1 111 Gene3D G3DSA:3.40.30.10 2 106 2.6E-30 T 14-10-2018 JV59_28030 e352c1ce59d3ad2b8a6c894c3df291d1 111 PIRSF PIRSF005894 1 107 6.2E-52 T 14-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 JV59_28030 e352c1ce59d3ad2b8a6c894c3df291d1 111 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 9.6E-46 T 14-10-2018 IPR004480 Monothiol glutaredoxin-related JV59_18880 58f4b0f268a581047eea231fa902d7bd 156 PIRSF PIRSF003174 1 156 1.5E-51 T 14-10-2018 IPR010292 Uncharacterised protein family CreA JV59_18880 58f4b0f268a581047eea231fa902d7bd 156 Pfam PF05981 CreA protein 23 145 1.5E-44 T 14-10-2018 IPR010292 Uncharacterised protein family CreA JV59_01725 d1aab80ab76922b27108894db3f14cda 209 PIRSF PIRSF005461 1 209 4.7E-80 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 JV59_01725 d1aab80ab76922b27108894db3f14cda 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 1.2E-57 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 JV59_01725 d1aab80ab76922b27108894db3f14cda 209 Gene3D G3DSA:3.40.50.150 30 209 1.4E-60 T 14-10-2018 JV59_01725 d1aab80ab76922b27108894db3f14cda 209 SUPERFAMILY SSF53335 30 209 1.44E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_01725 d1aab80ab76922b27108894db3f14cda 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 28.567 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 JV59_27075 6d9b368ca773a7b9e289c5b8aa046b02 392 Gene3D G3DSA:2.60.410.10 284 373 3.1E-31 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JV59_27075 6d9b368ca773a7b9e289c5b8aa046b02 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 122 139 5.0E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JV59_27075 6d9b368ca773a7b9e289c5b8aa046b02 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 5.0E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JV59_27075 6d9b368ca773a7b9e289c5b8aa046b02 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 149 162 5.0E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JV59_27075 6d9b368ca773a7b9e289c5b8aa046b02 392 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 283 373 1.5E-27 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JV59_27075 6d9b368ca773a7b9e289c5b8aa046b02 392 Gene3D G3DSA:3.40.710.10 33 283 3.0E-91 T 14-10-2018 JV59_27075 6d9b368ca773a7b9e289c5b8aa046b02 392 SUPERFAMILY SSF69189 283 375 3.92E-28 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JV59_27075 6d9b368ca773a7b9e289c5b8aa046b02 392 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 34 263 4.9E-95 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 JV59_27075 6d9b368ca773a7b9e289c5b8aa046b02 392 SMART SM00936 283 373 9.2E-39 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JV59_27075 6d9b368ca773a7b9e289c5b8aa046b02 392 SUPERFAMILY SSF56601 13 283 7.8E-86 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JV59_25560 11e2d9df6845464875482ad38c0f59a6 531 SMART SM00283 269 530 3.4E-58 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_25560 11e2d9df6845464875482ad38c0f59a6 531 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 341 495 2.9E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_25560 11e2d9df6845464875482ad38c0f59a6 531 SMART SM00304 200 254 2.6E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_25560 11e2d9df6845464875482ad38c0f59a6 531 Pfam PF00672 HAMP domain 200 247 9.6E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_25560 11e2d9df6845464875482ad38c0f59a6 531 SUPERFAMILY SSF58104 222 530 3.92E-68 T 14-10-2018 JV59_25560 11e2d9df6845464875482ad38c0f59a6 531 Gene3D G3DSA:1.10.287.950 200 531 3.9E-67 T 14-10-2018 JV59_35610 57b641b6861327f3bc4eb4dd9b4169bc 463 Pfam PF00854 POT family 86 198 2.6E-29 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 JV59_35610 57b641b6861327f3bc4eb4dd9b4169bc 463 Pfam PF00854 POT family 232 406 2.0E-30 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 JV59_35610 57b641b6861327f3bc4eb4dd9b4169bc 463 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 229 441 8.8E-47 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 JV59_35610 57b641b6861327f3bc4eb4dd9b4169bc 463 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 7 215 7.5E-60 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 JV59_35610 57b641b6861327f3bc4eb4dd9b4169bc 463 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 154 166 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 JV59_35610 57b641b6861327f3bc4eb4dd9b4169bc 463 SUPERFAMILY SSF103473 8 435 1.44E-43 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_35610 57b641b6861327f3bc4eb4dd9b4169bc 463 Gene3D G3DSA:1.20.1250.20 224 455 3.9E-60 T 14-10-2018 JV59_35610 57b641b6861327f3bc4eb4dd9b4169bc 463 Gene3D G3DSA:1.20.1250.20 1 223 3.6E-75 T 14-10-2018 JV59_02030 f2581cfa2249e62af9943dc6f682b87c 494 Gene3D G3DSA:3.90.190.20 341 493 3.6E-53 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JV59_02030 f2581cfa2249e62af9943dc6f682b87c 494 Gene3D G3DSA:3.40.1190.10 108 340 1.1E-76 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JV59_02030 f2581cfa2249e62af9943dc6f682b87c 494 SUPERFAMILY SSF53623 108 337 8.24E-72 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JV59_02030 f2581cfa2249e62af9943dc6f682b87c 494 SUPERFAMILY SSF53244 339 490 1.03E-47 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JV59_02030 f2581cfa2249e62af9943dc6f682b87c 494 Pfam PF08245 Mur ligase middle domain 117 317 3.7E-49 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 JV59_02030 f2581cfa2249e62af9943dc6f682b87c 494 Gene3D G3DSA:3.40.1390.10 3 107 1.7E-29 T 14-10-2018 JV59_02030 f2581cfa2249e62af9943dc6f682b87c 494 Pfam PF01225 Mur ligase family, catalytic domain 27 105 1.6E-13 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 JV59_02030 f2581cfa2249e62af9943dc6f682b87c 494 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 25 490 2.0E-166 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 JV59_02030 f2581cfa2249e62af9943dc6f682b87c 494 Pfam PF02875 Mur ligase family, glutamate ligase domain 340 423 3.7E-22 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 JV59_02030 f2581cfa2249e62af9943dc6f682b87c 494 SUPERFAMILY SSF63418 10 105 6.02E-23 T 14-10-2018 IPR035911 MurE/MurF, N-terminal JV59_02030 f2581cfa2249e62af9943dc6f682b87c 494 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 490 33.82 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 JV59_20730 699c2c4f375f509ec21a86c7fe4e83d6 310 SUPERFAMILY SSF56219 87 308 5.76E-19 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JV59_20730 699c2c4f375f509ec21a86c7fe4e83d6 310 Gene3D G3DSA:3.60.10.10 86 309 2.5E-15 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JV59_24425 ca692860af16500de0d69bd671d2de14 291 SUPERFAMILY SSF48179 166 289 3.97E-37 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JV59_24425 ca692860af16500de0d69bd671d2de14 291 Gene3D G3DSA:1.10.1040.10 166 291 3.4E-36 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JV59_24425 ca692860af16500de0d69bd671d2de14 291 PIRSF PIRSF000103 1 291 5.9E-75 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 JV59_24425 ca692860af16500de0d69bd671d2de14 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 167 286 4.1E-29 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 JV59_24425 ca692860af16500de0d69bd671d2de14 291 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 JV59_24425 ca692860af16500de0d69bd671d2de14 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 161 2.4E-50 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 JV59_24425 ca692860af16500de0d69bd671d2de14 291 SUPERFAMILY SSF51735 3 165 5.31E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_24425 ca692860af16500de0d69bd671d2de14 291 Gene3D G3DSA:3.40.50.720 1 165 1.5E-51 T 14-10-2018 JV59_16330 b1a0997756c624fae33942e3bed92652 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 190 4.5E-19 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_16330 b1a0997756c624fae33942e3bed92652 243 SUPERFAMILY SSF53850 35 241 1.48E-27 T 14-10-2018 JV59_16330 b1a0997756c624fae33942e3bed92652 243 Gene3D G3DSA:3.40.190.10 38 241 2.7E-21 T 14-10-2018 JV59_16330 b1a0997756c624fae33942e3bed92652 243 Gene3D G3DSA:3.40.190.10 113 213 2.7E-21 T 14-10-2018 JV59_30235 dcde5ba9eaeb86589aa9e3652d5c65f2 205 SUPERFAMILY SSF103088 56 185 6.8E-28 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_30235 dcde5ba9eaeb86589aa9e3652d5c65f2 205 Gene3D G3DSA:3.30.1330.60 53 193 2.0E-27 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_30235 dcde5ba9eaeb86589aa9e3652d5c65f2 205 PRINTS PR01021 OMPA domain signature 86 108 3.5E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_30235 dcde5ba9eaeb86589aa9e3652d5c65f2 205 PRINTS PR01021 OMPA domain signature 116 131 3.5E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_30235 dcde5ba9eaeb86589aa9e3652d5c65f2 205 PRINTS PR01021 OMPA domain signature 131 147 3.5E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_30235 dcde5ba9eaeb86589aa9e3652d5c65f2 205 Pfam PF00691 OmpA family 85 180 2.0E-16 T 14-10-2018 IPR006665 OmpA-like domain JV59_16840 67d986d6021ad3db3ae813fa126ae15f 337 Pfam PF00891 O-methyltransferase 103 314 9.0E-29 T 14-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 JV59_16840 67d986d6021ad3db3ae813fa126ae15f 337 SUPERFAMILY SSF53335 89 334 1.96E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_16840 67d986d6021ad3db3ae813fa126ae15f 337 Gene3D G3DSA:3.40.50.150 88 335 1.5E-49 T 14-10-2018 JV59_16840 67d986d6021ad3db3ae813fa126ae15f 337 PIRSF PIRSF005739 2 336 9.3E-28 T 14-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 JV59_16840 67d986d6021ad3db3ae813fa126ae15f 337 SUPERFAMILY SSF46785 12 91 2.52E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_16840 67d986d6021ad3db3ae813fa126ae15f 337 Gene3D G3DSA:1.10.10.10 2 85 6.9E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_22430 caed11674d5072012a925d170b3d95d5 726 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 127 717 1.1E-189 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 JV59_22430 caed11674d5072012a925d170b3d95d5 726 SUPERFAMILY SSF51445 166 717 4.02E-148 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_22430 caed11674d5072012a925d170b3d95d5 726 Pfam PF02446 4-alpha-glucanotransferase 177 699 1.2E-126 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 JV59_25580 8cb4df895440b9462ad78be64299624a 546 Gene3D G3DSA:3.10.105.10 294 508 1.5E-171 T 14-10-2018 JV59_25580 8cb4df895440b9462ad78be64299624a 546 SUPERFAMILY SSF53850 34 528 5.97E-131 T 14-10-2018 JV59_25580 8cb4df895440b9462ad78be64299624a 546 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 456 5.5E-83 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain JV59_25580 8cb4df895440b9462ad78be64299624a 546 Gene3D G3DSA:3.40.190.10 40 519 1.5E-171 T 14-10-2018 JV59_25580 8cb4df895440b9462ad78be64299624a 546 Gene3D G3DSA:3.90.76.10 69 192 1.5E-171 T 14-10-2018 JV59_25580 8cb4df895440b9462ad78be64299624a 546 PIRSF PIRSF002741 6 539 1.2E-101 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 JV59_30110 0cbaf19841cecf80bd426811124140c9 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 76 1.0E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_30110 0cbaf19841cecf80bd426811124140c9 242 SMART SM00866 97 235 4.7E-21 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 JV59_30110 0cbaf19841cecf80bd426811124140c9 242 SUPERFAMILY SSF46785 10 80 2.73E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_30110 0cbaf19841cecf80bd426811124140c9 242 Gene3D G3DSA:1.10.10.10 6 78 4.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_30110 0cbaf19841cecf80bd426811124140c9 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 1.5E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_30110 0cbaf19841cecf80bd426811124140c9 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 1.5E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_30110 0cbaf19841cecf80bd426811124140c9 242 SUPERFAMILY SSF64288 64 241 1.32E-38 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JV59_30110 0cbaf19841cecf80bd426811124140c9 242 Gene3D G3DSA:3.40.1410.10 82 240 1.5E-30 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JV59_30110 0cbaf19841cecf80bd426811124140c9 242 Pfam PF07702 UTRA domain 99 234 4.5E-25 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 JV59_30110 0cbaf19841cecf80bd426811124140c9 242 SMART SM00345 17 76 2.9E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JV59_30215 e6f7e402f665de9064de1908efd3b97e 223 SUPERFAMILY SSF52540 1 217 4.46E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_30215 e6f7e402f665de9064de1908efd3b97e 223 Gene3D G3DSA:3.40.50.300 1 223 1.1E-59 T 14-10-2018 JV59_30215 e6f7e402f665de9064de1908efd3b97e 223 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_30215 e6f7e402f665de9064de1908efd3b97e 223 Pfam PF00005 ABC transporter 21 167 1.2E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_30215 e6f7e402f665de9064de1908efd3b97e 223 SMART SM00382 30 218 5.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_27360 8f766be3500df6c1b86ac42a4efe7f1a 132 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 8.6E-29 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 JV59_27360 8f766be3500df6c1b86ac42a4efe7f1a 132 PIRSF PIRSF002889 1 131 1.2E-33 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 JV59_23910 9210735dfe53b979f54e8811f28274ec 81 Gene3D G3DSA:1.20.58.660 11 81 2.9E-12 T 14-10-2018 JV59_23910 9210735dfe53b979f54e8811f28274ec 81 Pfam PF04325 Protein of unknown function (DUF465) 34 74 4.1E-6 T 14-10-2018 IPR007420 Protein of unknown function DUF465 JV59_24715 fe3fff2552db5283f128d7c46e38ded1 344 Gene3D G3DSA:1.10.40.50 245 317 9.6E-20 T 14-10-2018 JV59_24715 fe3fff2552db5283f128d7c46e38ded1 344 SUPERFAMILY SSF52540 85 304 1.33E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_24715 fe3fff2552db5283f128d7c46e38ded1 344 Pfam PF03193 RsgA GTPase 67 243 9.7E-41 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 JV59_24715 fe3fff2552db5283f128d7c46e38ded1 344 Gene3D G3DSA:3.40.50.300 70 242 9.1E-39 T 14-10-2018 JV59_24715 fe3fff2552db5283f128d7c46e38ded1 344 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 7 307 29.29 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 JV59_24715 fe3fff2552db5283f128d7c46e38ded1 344 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 50 300 8.9E-46 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 JV59_10105 53eb3112649eafc2d0b12a472e750674 261 Pfam PF00561 alpha/beta hydrolase fold 17 245 5.9E-13 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_10105 53eb3112649eafc2d0b12a472e750674 261 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 16 257 1.4E-79 T 14-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 JV59_10105 53eb3112649eafc2d0b12a472e750674 261 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 8 258 33.234 T 14-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 JV59_10105 53eb3112649eafc2d0b12a472e750674 261 Gene3D G3DSA:3.40.50.1820 3 258 2.1E-62 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_10105 53eb3112649eafc2d0b12a472e750674 261 SUPERFAMILY SSF53474 5 255 1.74E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_29840 66de6078f7041c36f1966a1d480f77f6 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.8E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_29840 66de6078f7041c36f1966a1d480f77f6 290 Pfam PF03466 LysR substrate binding domain 88 286 1.9E-25 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_29840 66de6078f7041c36f1966a1d480f77f6 290 SUPERFAMILY SSF53850 89 286 6.52E-27 T 14-10-2018 JV59_29840 66de6078f7041c36f1966a1d480f77f6 290 Gene3D G3DSA:3.40.190.10 91 284 1.3E-27 T 14-10-2018 JV59_29840 66de6078f7041c36f1966a1d480f77f6 290 Gene3D G3DSA:3.40.190.10 162 261 1.3E-27 T 14-10-2018 JV59_29840 66de6078f7041c36f1966a1d480f77f6 290 Gene3D G3DSA:1.10.10.10 1 85 2.5E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_29840 66de6078f7041c36f1966a1d480f77f6 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_29840 66de6078f7041c36f1966a1d480f77f6 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_29840 66de6078f7041c36f1966a1d480f77f6 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_29840 66de6078f7041c36f1966a1d480f77f6 290 SUPERFAMILY SSF46785 1 110 9.8E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_01570 753098803d8052349fc7cdf5d1a93d65 862 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 379 6.1E-96 T 14-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 JV59_01570 753098803d8052349fc7cdf5d1a93d65 862 Gene3D G3DSA:3.40.1060.10 382 678 1.4E-149 T 14-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 JV59_01570 753098803d8052349fc7cdf5d1a93d65 862 Gene3D G3DSA:3.30.499.10 399 526 1.4E-149 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 JV59_01570 753098803d8052349fc7cdf5d1a93d65 862 SUPERFAMILY SSF74778 2 159 6.28E-68 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 JV59_01570 753098803d8052349fc7cdf5d1a93d65 862 Gene3D G3DSA:3.20.19.10 162 358 1.4E-76 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 JV59_01570 753098803d8052349fc7cdf5d1a93d65 862 ProSitePatterns PS00450 Aconitase family signature 1. 699 716 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 JV59_01570 753098803d8052349fc7cdf5d1a93d65 862 PIRSF PIRSF036687 1 856 0.0 T 14-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 JV59_01570 753098803d8052349fc7cdf5d1a93d65 862 Pfam PF00330 Aconitase family (aconitate hydratase) 469 815 3.6E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JV59_01570 753098803d8052349fc7cdf5d1a93d65 862 ProSitePatterns PS01244 Aconitase family signature 2. 758 771 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 JV59_01570 753098803d8052349fc7cdf5d1a93d65 862 SUPERFAMILY SSF52016 162 369 6.28E-67 T 14-10-2018 JV59_01570 753098803d8052349fc7cdf5d1a93d65 862 SUPERFAMILY SSF53732 375 857 2.09E-147 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 JV59_01570 753098803d8052349fc7cdf5d1a93d65 862 Pfam PF11791 Aconitate B N-terminal domain 4 156 1.4E-66 T 14-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 JV59_01570 753098803d8052349fc7cdf5d1a93d65 862 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 850 0.0 T 14-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 JV59_01570 753098803d8052349fc7cdf5d1a93d65 862 Gene3D G3DSA:3.30.499.10 680 862 1.3E-72 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 JV59_01570 753098803d8052349fc7cdf5d1a93d65 862 Gene3D G3DSA:1.25.40.310 1 160 1.4E-71 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 JV59_16970 4907e8d6f2ed54c89753c05ae5e17ccc 275 Gene3D G3DSA:1.10.10.60 174 232 2.1E-13 T 14-10-2018 JV59_16970 4907e8d6f2ed54c89753c05ae5e17ccc 275 Pfam PF12833 Helix-turn-helix domain 196 273 3.4E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_16970 4907e8d6f2ed54c89753c05ae5e17ccc 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 256 9.5E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_16970 4907e8d6f2ed54c89753c05ae5e17ccc 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 272 9.5E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_16970 4907e8d6f2ed54c89753c05ae5e17ccc 275 SUPERFAMILY SSF46689 227 274 2.69E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_16970 4907e8d6f2ed54c89753c05ae5e17ccc 275 SUPERFAMILY SSF51215 30 156 2.35E-17 T 14-10-2018 IPR037923 Transcription regulator HTH-like JV59_16970 4907e8d6f2ed54c89753c05ae5e17ccc 275 SMART SM00342 190 272 1.1E-31 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_16970 4907e8d6f2ed54c89753c05ae5e17ccc 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 227 268 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JV59_16970 4907e8d6f2ed54c89753c05ae5e17ccc 275 SUPERFAMILY SSF46689 174 224 6.09E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_16970 4907e8d6f2ed54c89753c05ae5e17ccc 275 Gene3D G3DSA:1.10.10.60 233 275 3.5E-15 T 14-10-2018 JV59_16970 4907e8d6f2ed54c89753c05ae5e17ccc 275 Pfam PF02311 AraC-like ligand binding domain 19 150 1.1E-25 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 JV59_16770 18321a4c72392bb7dbd58d28a3307698 208 Pfam PF01810 LysE type translocator 15 207 4.6E-34 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_16770 18321a4c72392bb7dbd58d28a3307698 208 PIRSF PIRSF006324 1 208 4.6E-46 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_24955 1ed2ab35908450fa356a3d0b27ef78b4 249 Pfam PF08279 HTH domain 6 57 6.0E-10 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 JV59_24955 1ed2ab35908450fa356a3d0b27ef78b4 249 SMART SM00420 6 62 0.0051 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 JV59_24955 1ed2ab35908450fa356a3d0b27ef78b4 249 Gene3D G3DSA:1.10.10.10 1 62 1.5E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_24955 1ed2ab35908450fa356a3d0b27ef78b4 249 Pfam PF13280 WYL domain 147 228 2.4E-16 T 14-10-2018 IPR026881 WYL domain JV59_24955 1ed2ab35908450fa356a3d0b27ef78b4 249 SUPERFAMILY SSF46785 6 60 2.12E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_06470 244d7f965ddf2e085f2ae1f5ff1d352f 400 Gene3D G3DSA:3.40.50.2000 16 354 5.1E-65 T 14-10-2018 JV59_06470 244d7f965ddf2e085f2ae1f5ff1d352f 400 SUPERFAMILY SSF53756 1 368 5.76E-75 T 14-10-2018 JV59_06470 244d7f965ddf2e085f2ae1f5ff1d352f 400 Gene3D G3DSA:3.40.50.2000 170 352 5.1E-65 T 14-10-2018 JV59_06470 244d7f965ddf2e085f2ae1f5ff1d352f 400 Pfam PF13439 Glycosyltransferase Family 4 16 172 1.5E-20 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 JV59_06470 244d7f965ddf2e085f2ae1f5ff1d352f 400 Pfam PF00534 Glycosyl transferases group 1 183 345 1.1E-32 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 JV59_32295 b242d7606796b272c3a84c3217d87107 723 Pfam PF00574 Clp protease 45 182 2.0E-31 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA JV59_32295 b242d7606796b272c3a84c3217d87107 723 PRINTS PR00127 Clp protease catalytic subunit P signature 52 72 1.1E-7 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JV59_32295 b242d7606796b272c3a84c3217d87107 723 PRINTS PR00127 Clp protease catalytic subunit P signature 159 178 1.1E-7 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JV59_32295 b242d7606796b272c3a84c3217d87107 723 PRINTS PR00127 Clp protease catalytic subunit P signature 83 100 1.1E-7 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JV59_32295 b242d7606796b272c3a84c3217d87107 723 SUPERFAMILY SSF52096 20 188 6.83E-44 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JV59_32295 b242d7606796b272c3a84c3217d87107 723 Gene3D G3DSA:3.90.226.10 4 191 2.5E-48 T 14-10-2018 JV59_26790 ab81ffd63b043431c3823da73644a5c2 198 PIRSF PIRSF006102 1 198 9.9E-66 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 JV59_26790 ab81ffd63b043431c3823da73644a5c2 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 2.7E-59 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 JV59_26790 ab81ffd63b043431c3823da73644a5c2 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 1.7E-107 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 JV59_26790 ab81ffd63b043431c3823da73644a5c2 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.879 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 JV59_25575 8a2d58cbce19acb33319f6986aa46169 79 SUPERFAMILY SSF81273 3 47 1.04E-8 T 14-10-2018 JV59_25575 8a2d58cbce19acb33319f6986aa46169 79 Gene3D G3DSA:1.10.287.1050 1 73 2.9E-11 T 14-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 JV59_38770 aefddb9cd9d81a9c7102a24c06e46174 166 Pfam PF04542 Sigma-70 region 2 9 74 2.3E-9 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JV59_38770 aefddb9cd9d81a9c7102a24c06e46174 166 Pfam PF08281 Sigma-70, region 4 105 155 1.9E-16 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JV59_38770 aefddb9cd9d81a9c7102a24c06e46174 166 Gene3D G3DSA:1.10.10.10 73 161 3.5E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_38770 aefddb9cd9d81a9c7102a24c06e46174 166 SUPERFAMILY SSF88946 5 94 2.08E-11 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JV59_38770 aefddb9cd9d81a9c7102a24c06e46174 166 SUPERFAMILY SSF88659 81 156 1.05E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JV59_38770 aefddb9cd9d81a9c7102a24c06e46174 166 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 155 1.1E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JV59_38770 aefddb9cd9d81a9c7102a24c06e46174 166 Gene3D G3DSA:1.10.1740.10 2 71 2.1E-6 T 14-10-2018 JV59_38880 9b645ee87077f08450556e6b7ff521c9 117 TIGRFAM TIGR01707 gspI: type II secretion system protein I 6 103 4.7E-32 T 14-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 JV59_38880 9b645ee87077f08450556e6b7ff521c9 117 SUPERFAMILY SSF54523 37 115 5.49E-23 T 14-10-2018 JV59_38880 9b645ee87077f08450556e6b7ff521c9 117 Pfam PF02501 Type II secretion system (T2SS), protein I 40 115 1.0E-20 T 14-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 JV59_38880 9b645ee87077f08450556e6b7ff521c9 117 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 5.4E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_38880 9b645ee87077f08450556e6b7ff521c9 117 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 25 4.0E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_38880 9b645ee87077f08450556e6b7ff521c9 117 Gene3D G3DSA:3.30.1300.30 30 117 1.2E-31 T 14-10-2018 JV59_38880 9b645ee87077f08450556e6b7ff521c9 117 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_30310 bbcef445910d82e7c7a0ab4462e17f1f 627 SUPERFAMILY SSF58104 318 627 8.89E-77 T 14-10-2018 JV59_30310 bbcef445910d82e7c7a0ab4462e17f1f 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 427 592 1.8E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_30310 bbcef445910d82e7c7a0ab4462e17f1f 627 Gene3D G3DSA:3.30.450.20 60 168 4.4E-54 T 14-10-2018 JV59_30310 bbcef445910d82e7c7a0ab4462e17f1f 627 Pfam PF00672 HAMP domain 300 346 2.3E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_30310 bbcef445910d82e7c7a0ab4462e17f1f 627 Gene3D G3DSA:1.10.287.950 296 627 3.6E-73 T 14-10-2018 JV59_30310 bbcef445910d82e7c7a0ab4462e17f1f 627 SMART SM00304 296 350 2.7E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_30310 bbcef445910d82e7c7a0ab4462e17f1f 627 SMART SM00304 353 403 6.9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_30310 bbcef445910d82e7c7a0ab4462e17f1f 627 SUPERFAMILY SSF103190 89 175 2.38E-11 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JV59_30310 bbcef445910d82e7c7a0ab4462e17f1f 627 Gene3D G3DSA:3.30.450.20 51 268 4.4E-54 T 14-10-2018 JV59_30310 bbcef445910d82e7c7a0ab4462e17f1f 627 Pfam PF02743 Cache domain 38 258 1.7E-32 T 14-10-2018 IPR033479 Double Cache domain 1 JV59_30310 bbcef445910d82e7c7a0ab4462e17f1f 627 SMART SM00283 365 626 7.4E-65 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_00175 05b21d276f3c8f49ba687786380162c5 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 296 4.8E-101 T 14-10-2018 JV59_00175 05b21d276f3c8f49ba687786380162c5 305 Pfam PF01040 UbiA prenyltransferase family 21 274 1.4E-39 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 JV59_00175 05b21d276f3c8f49ba687786380162c5 305 PIRSF PIRSF005355 1 303 1.8E-85 T 14-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 JV59_00175 05b21d276f3c8f49ba687786380162c5 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 21.059 T 14-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 JV59_21165 2b3a9035405e3d998e14e6f39d1ac6b3 356 Gene3D G3DSA:3.40.640.10 2 253 5.1E-67 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_21165 2b3a9035405e3d998e14e6f39d1ac6b3 356 Gene3D G3DSA:3.90.1150.10 254 356 4.4E-10 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_21165 2b3a9035405e3d998e14e6f39d1ac6b3 356 Pfam PF01212 Beta-eliminating lyase 19 292 3.0E-34 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 JV59_21165 2b3a9035405e3d998e14e6f39d1ac6b3 356 SUPERFAMILY SSF53383 19 353 1.39E-73 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_27510 09a1a032d61b126f54e0cf23ded878d1 553 SUPERFAMILY SSF55816 366 543 2.75E-52 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_27510 09a1a032d61b126f54e0cf23ded878d1 553 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_27510 09a1a032d61b126f54e0cf23ded878d1 553 Gene3D G3DSA:3.90.780.10 366 552 3.0E-59 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_27510 09a1a032d61b126f54e0cf23ded878d1 553 SUPERFAMILY SSF56300 31 364 6.54E-98 T 14-10-2018 JV59_27510 09a1a032d61b126f54e0cf23ded878d1 553 Pfam PF02872 5'-nucleotidase, C-terminal domain 366 512 2.3E-33 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_27510 09a1a032d61b126f54e0cf23ded878d1 553 Gene3D G3DSA:3.60.21.10 30 365 2.0E-126 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JV59_27510 09a1a032d61b126f54e0cf23ded878d1 553 PRINTS PR01607 Apyrase family signature 36 54 7.6E-52 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_27510 09a1a032d61b126f54e0cf23ded878d1 553 PRINTS PR01607 Apyrase family signature 487 506 7.6E-52 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_27510 09a1a032d61b126f54e0cf23ded878d1 553 PRINTS PR01607 Apyrase family signature 211 228 7.6E-52 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_27510 09a1a032d61b126f54e0cf23ded878d1 553 PRINTS PR01607 Apyrase family signature 420 443 7.6E-52 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_27510 09a1a032d61b126f54e0cf23ded878d1 553 PRINTS PR01607 Apyrase family signature 242 265 7.6E-52 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_27510 09a1a032d61b126f54e0cf23ded878d1 553 PRINTS PR01607 Apyrase family signature 287 307 7.6E-52 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_27510 09a1a032d61b126f54e0cf23ded878d1 553 Pfam PF00149 Calcineurin-like phosphoesterase 38 259 1.4E-21 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 JV59_27510 09a1a032d61b126f54e0cf23ded878d1 553 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_19395 e2d76fd2305367d60370bdd4dbf3ab3e 688 Pfam PF00580 UvrD/REP helicase N-terminal domain 201 497 7.8E-43 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 JV59_19395 e2d76fd2305367d60370bdd4dbf3ab3e 688 SUPERFAMILY SSF52540 198 679 7.03E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_19395 e2d76fd2305367d60370bdd4dbf3ab3e 688 Gene3D G3DSA:3.40.50.300 200 499 3.6E-51 T 14-10-2018 JV59_19395 e2d76fd2305367d60370bdd4dbf3ab3e 688 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 166 3.8E-45 T 14-10-2018 IPR022161 DNA helicase IV, N-terminal domain JV59_19395 e2d76fd2305367d60370bdd4dbf3ab3e 688 Gene3D G3DSA:3.40.50.300 506 682 5.2E-29 T 14-10-2018 JV59_19395 e2d76fd2305367d60370bdd4dbf3ab3e 688 Gene3D G3DSA:1.10.10.160 303 414 3.6E-51 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily JV59_19395 e2d76fd2305367d60370bdd4dbf3ab3e 688 Pfam PF13361 UvrD-like helicase C-terminal domain 594 667 1.4E-18 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 JV59_20250 cc8fd4f57351b163943ce25ecca7e1ab 238 Gene3D G3DSA:3.40.50.1360 1 238 5.5E-89 T 14-10-2018 JV59_20250 cc8fd4f57351b163943ce25ecca7e1ab 238 SUPERFAMILY SSF100950 3 237 3.93E-60 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JV59_20250 cc8fd4f57351b163943ce25ecca7e1ab 238 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 227 4.8E-60 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 JV59_20250 cc8fd4f57351b163943ce25ecca7e1ab 238 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 10 237 3.3E-54 T 14-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 JV59_38860 91bb58bd57a683067b18cdb05c02f6c9 163 Pfam PF04612 Type II secretion system (T2SS), protein M 7 160 1.3E-48 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 JV59_38860 91bb58bd57a683067b18cdb05c02f6c9 163 PIRSF PIRSF006291 2 162 3.5E-38 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 JV59_38860 91bb58bd57a683067b18cdb05c02f6c9 163 Gene3D G3DSA:3.30.1360.100 85 163 3.5E-27 T 14-10-2018 JV59_38860 91bb58bd57a683067b18cdb05c02f6c9 163 SUPERFAMILY SSF103054 86 160 6.41E-21 T 14-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily JV59_27275 7282c93699b23d5d55d7da47f825e77c 320 Pfam PF00691 OmpA family 212 306 2.2E-24 T 14-10-2018 IPR006665 OmpA-like domain JV59_27275 7282c93699b23d5d55d7da47f825e77c 320 SUPERFAMILY SSF103088 192 312 1.44E-37 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_27275 7282c93699b23d5d55d7da47f825e77c 320 PRINTS PR01021 OMPA domain signature 212 234 9.8E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_27275 7282c93699b23d5d55d7da47f825e77c 320 PRINTS PR01021 OMPA domain signature 257 273 9.8E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_27275 7282c93699b23d5d55d7da47f825e77c 320 PRINTS PR01021 OMPA domain signature 242 257 9.8E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_27275 7282c93699b23d5d55d7da47f825e77c 320 Pfam PF01389 OmpA-like transmembrane domain 20 170 1.5E-25 T 14-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 JV59_27275 7282c93699b23d5d55d7da47f825e77c 320 Gene3D G3DSA:3.30.1330.60 183 314 1.3E-41 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_27275 7282c93699b23d5d55d7da47f825e77c 320 SUPERFAMILY SSF56925 21 171 2.88E-24 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JV59_27275 7282c93699b23d5d55d7da47f825e77c 320 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 275 294 2.1E-7 T 14-10-2018 JV59_27275 7282c93699b23d5d55d7da47f825e77c 320 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 257 274 2.1E-7 T 14-10-2018 JV59_27275 7282c93699b23d5d55d7da47f825e77c 320 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 295 315 2.1E-7 T 14-10-2018 JV59_27275 7282c93699b23d5d55d7da47f825e77c 320 Gene3D G3DSA:2.40.160.20 5 182 5.4E-34 T 14-10-2018 JV59_21075 0c03b23c5ae4a22aff10b79e0b3914d4 210 Pfam PF13460 NAD(P)H-binding 8 193 1.0E-28 T 14-10-2018 IPR016040 NAD(P)-binding domain JV59_21075 0c03b23c5ae4a22aff10b79e0b3914d4 210 SUPERFAMILY SSF51735 1 206 1.52E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_21075 0c03b23c5ae4a22aff10b79e0b3914d4 210 Gene3D G3DSA:3.40.50.720 1 209 1.2E-32 T 14-10-2018 JV59_01170 7f887cb81a0b33291baf3c502e62151d 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 2.2E-143 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 JV59_01170 7f887cb81a0b33291baf3c502e62151d 390 Pfam PF01018 GTP1/OBG 4 156 1.3E-55 T 14-10-2018 IPR006169 GTP1/OBG domain JV59_01170 7f887cb81a0b33291baf3c502e62151d 390 SUPERFAMILY SSF82051 2 157 6.02E-55 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily JV59_01170 7f887cb81a0b33291baf3c502e62151d 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.3E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JV59_01170 7f887cb81a0b33291baf3c502e62151d 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.3E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JV59_01170 7f887cb81a0b33291baf3c502e62151d 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.3E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JV59_01170 7f887cb81a0b33291baf3c502e62151d 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.3E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JV59_01170 7f887cb81a0b33291baf3c502e62151d 390 PIRSF PIRSF002401 1 375 1.3E-137 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type JV59_01170 7f887cb81a0b33291baf3c502e62151d 390 Gene3D G3DSA:3.40.50.300 159 336 1.9E-50 T 14-10-2018 JV59_01170 7f887cb81a0b33291baf3c502e62151d 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 JV59_01170 7f887cb81a0b33291baf3c502e62151d 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.957 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 JV59_01170 7f887cb81a0b33291baf3c502e62151d 390 Gene3D G3DSA:2.70.210.12 1 158 1.5E-57 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily JV59_01170 7f887cb81a0b33291baf3c502e62151d 390 Pfam PF01926 50S ribosome-binding GTPase 161 284 1.1E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JV59_01170 7f887cb81a0b33291baf3c502e62151d 390 SUPERFAMILY SSF52540 152 342 4.98E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_32520 42eb851727b8a15a23667d9c50644aa4 510 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.657 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JV59_32520 42eb851727b8a15a23667d9c50644aa4 510 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 JV59_32520 42eb851727b8a15a23667d9c50644aa4 510 Pfam PF00221 Aromatic amino acid lyase 12 470 3.3E-190 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 JV59_32520 42eb851727b8a15a23667d9c50644aa4 510 Gene3D G3DSA:1.10.275.10 2 197 3.3E-71 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal JV59_32520 42eb851727b8a15a23667d9c50644aa4 510 SUPERFAMILY SSF48557 4 507 2.67E-195 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 JV59_32520 42eb851727b8a15a23667d9c50644aa4 510 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 502 9.7E-217 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JV59_32520 42eb851727b8a15a23667d9c50644aa4 510 Gene3D G3DSA:1.20.200.10 198 509 2.0E-124 T 14-10-2018 JV59_22440 221dbc41ec127efb93cad92f688bd5df 902 Gene3D G3DSA:3.40.50.300 10 165 2.0E-6 T 14-10-2018 JV59_22440 221dbc41ec127efb93cad92f688bd5df 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 1.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_22440 221dbc41ec127efb93cad92f688bd5df 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 1.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_22440 221dbc41ec127efb93cad92f688bd5df 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 1.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_22440 221dbc41ec127efb93cad92f688bd5df 902 SUPERFAMILY SSF48452 443 805 2.11E-155 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_22440 221dbc41ec127efb93cad92f688bd5df 902 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 892 2.1E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_22440 221dbc41ec127efb93cad92f688bd5df 902 SMART SM00421 836 893 1.5E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_22440 221dbc41ec127efb93cad92f688bd5df 902 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_22440 221dbc41ec127efb93cad92f688bd5df 902 SUPERFAMILY SSF52540 32 230 3.11E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_22440 221dbc41ec127efb93cad92f688bd5df 902 SUPERFAMILY SSF46894 831 894 1.53E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_22440 221dbc41ec127efb93cad92f688bd5df 902 Gene3D G3DSA:1.25.40.10 442 811 3.1E-81 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_22440 221dbc41ec127efb93cad92f688bd5df 902 Gene3D G3DSA:1.10.10.10 829 899 6.4E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_22440 221dbc41ec127efb93cad92f688bd5df 902 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 902 37.008 T 14-10-2018 IPR023768 Transcriptional regulator HTH-type, MalT JV59_21725 7e2b3b2abded40795d63e48e1a20ab67 287 Gene3D G3DSA:1.10.3720.10 61 285 6.7E-35 T 14-10-2018 IPR035906 MetI-like superfamily JV59_21725 7e2b3b2abded40795d63e48e1a20ab67 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 282 1.8E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_21725 7e2b3b2abded40795d63e48e1a20ab67 287 SUPERFAMILY SSF161098 22 274 1.59E-42 T 14-10-2018 IPR035906 MetI-like superfamily JV59_21725 7e2b3b2abded40795d63e48e1a20ab67 287 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 14 283 3.1E-98 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 JV59_27295 146d13ae479d90dfc92fe12cb5956a30 178 SUPERFAMILY SSF55729 5 137 7.77E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_27295 146d13ae479d90dfc92fe12cb5956a30 178 Pfam PF13508 Acetyltransferase (GNAT) domain 50 131 2.0E-11 T 14-10-2018 IPR000182 GNAT domain JV59_27295 146d13ae479d90dfc92fe12cb5956a30 178 Gene3D G3DSA:3.40.630.30 5 177 2.8E-29 T 14-10-2018 JV59_32140 20f11324d5e82c2095aef775e18d6c1f 206 SMART SM00855 5 155 1.5E-7 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JV59_32140 20f11324d5e82c2095aef775e18d6c1f 206 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 188 1.5E-31 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JV59_32140 20f11324d5e82c2095aef775e18d6c1f 206 Gene3D G3DSA:3.40.50.1240 1 206 3.2E-48 T 14-10-2018 IPR029033 Histidine phosphatase superfamily JV59_32140 20f11324d5e82c2095aef775e18d6c1f 206 SUPERFAMILY SSF53254 3 194 5.57E-33 T 14-10-2018 IPR029033 Histidine phosphatase superfamily JV59_17340 c2356b08ab234f0e79cfcfb6827daf9a 272 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 18 269 3.1E-65 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 JV59_17340 c2356b08ab234f0e79cfcfb6827daf9a 272 SUPERFAMILY SSF53850 24 271 2.4E-64 T 14-10-2018 JV59_17340 c2356b08ab234f0e79cfcfb6827daf9a 272 Gene3D G3DSA:3.40.190.10 97 231 2.3E-79 T 14-10-2018 JV59_17340 c2356b08ab234f0e79cfcfb6827daf9a 272 Gene3D G3DSA:3.40.190.10 26 269 2.3E-79 T 14-10-2018 JV59_17340 c2356b08ab234f0e79cfcfb6827daf9a 272 Pfam PF12727 PBP superfamily domain 40 254 3.3E-38 T 14-10-2018 IPR024370 PBP domain JV59_01710 d4f57f80205e3883f719624035574f24 345 Pfam PF13609 Gram-negative porin 9 320 5.7E-26 T 14-10-2018 JV59_01710 d4f57f80205e3883f719624035574f24 345 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 1.0E-5 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 JV59_01710 d4f57f80205e3883f719624035574f24 345 PRINTS PR00183 E.coli/Salmonella-type porin signature 96 118 1.0E-5 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 JV59_01710 d4f57f80205e3883f719624035574f24 345 PRINTS PR00183 E.coli/Salmonella-type porin signature 230 247 1.0E-5 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 JV59_01710 d4f57f80205e3883f719624035574f24 345 SUPERFAMILY SSF56935 22 345 5.95E-55 T 14-10-2018 JV59_01710 d4f57f80205e3883f719624035574f24 345 Gene3D G3DSA:2.40.160.10 22 345 6.1E-72 T 14-10-2018 IPR023614 Porin domain superfamily JV59_02195 e2bb719cd3cbaa069d70276f67aecf2b 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 107 277 7.2E-27 T 14-10-2018 JV59_02195 e2bb719cd3cbaa069d70276f67aecf2b 326 Gene3D G3DSA:1.10.150.210 115 177 8.6E-168 T 14-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 JV59_02195 e2bb719cd3cbaa069d70276f67aecf2b 326 Gene3D G3DSA:3.40.50.1000 4 310 8.6E-168 T 14-10-2018 IPR023214 HAD superfamily JV59_02195 e2bb719cd3cbaa069d70276f67aecf2b 326 SUPERFAMILY SSF56784 103 310 4.34E-50 T 14-10-2018 IPR036412 HAD-like superfamily JV59_02195 e2bb719cd3cbaa069d70276f67aecf2b 326 Pfam PF00702 haloacid dehalogenase-like hydrolase 107 279 1.7E-16 T 14-10-2018 JV59_02195 e2bb719cd3cbaa069d70276f67aecf2b 326 Gene3D G3DSA:3.30.70.2020 8 318 8.6E-168 T 14-10-2018 JV59_02195 e2bb719cd3cbaa069d70276f67aecf2b 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 101 310 2.3E-86 T 14-10-2018 JV59_22275 6dfc6e841f14559261d06e540d70525b 395 Gene3D G3DSA:2.60.120.10 307 388 2.0E-134 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_22275 6dfc6e841f14559261d06e540d70525b 395 Gene3D G3DSA:2.60.120.10 8 281 2.0E-134 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_22275 6dfc6e841f14559261d06e540d70525b 395 PIRSF PIRSF001480 1 395 3.1E-101 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_22275 6dfc6e841f14559261d06e540d70525b 395 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 261 286 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_22275 6dfc6e841f14559261d06e540d70525b 395 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 125 133 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_22275 6dfc6e841f14559261d06e540d70525b 395 PRINTS PR00714 Phosphomannose isomerase type I signature 34 49 2.5E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_22275 6dfc6e841f14559261d06e540d70525b 395 PRINTS PR00714 Phosphomannose isomerase type I signature 6 24 2.5E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_22275 6dfc6e841f14559261d06e540d70525b 395 PRINTS PR00714 Phosphomannose isomerase type I signature 226 241 2.5E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_22275 6dfc6e841f14559261d06e540d70525b 395 PRINTS PR00714 Phosphomannose isomerase type I signature 242 261 2.5E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_22275 6dfc6e841f14559261d06e540d70525b 395 PRINTS PR00714 Phosphomannose isomerase type I signature 280 299 2.5E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_22275 6dfc6e841f14559261d06e540d70525b 395 PRINTS PR00714 Phosphomannose isomerase type I signature 80 101 2.5E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_22275 6dfc6e841f14559261d06e540d70525b 395 PRINTS PR00714 Phosphomannose isomerase type I signature 125 148 2.5E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_22275 6dfc6e841f14559261d06e540d70525b 395 PRINTS PR00714 Phosphomannose isomerase type I signature 261 280 2.5E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_22275 6dfc6e841f14559261d06e540d70525b 395 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 3 382 2.8E-97 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_22275 6dfc6e841f14559261d06e540d70525b 395 SUPERFAMILY SSF51182 2 384 1.13E-102 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JV59_22275 6dfc6e841f14559261d06e540d70525b 395 Pfam PF01238 Phosphomannose isomerase type I 3 360 2.6E-86 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JV59_22275 6dfc6e841f14559261d06e540d70525b 395 Gene3D G3DSA:1.10.441.10 149 306 2.0E-134 T 14-10-2018 JV59_22920 1a5e862dd6954a12702c8be3ebdd30c7 274 SMART SM00342 187 269 9.6E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_22920 1a5e862dd6954a12702c8be3ebdd30c7 274 Gene3D G3DSA:1.10.10.60 221 273 2.8E-13 T 14-10-2018 JV59_22920 1a5e862dd6954a12702c8be3ebdd30c7 274 Pfam PF02311 AraC-like ligand binding domain 14 146 3.7E-19 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 JV59_22920 1a5e862dd6954a12702c8be3ebdd30c7 274 SUPERFAMILY SSF46689 224 271 3.85E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_22920 1a5e862dd6954a12702c8be3ebdd30c7 274 Pfam PF12833 Helix-turn-helix domain 194 271 3.9E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_22920 1a5e862dd6954a12702c8be3ebdd30c7 274 SUPERFAMILY SSF46689 170 220 1.97E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_22920 1a5e862dd6954a12702c8be3ebdd30c7 274 Gene3D G3DSA:1.10.10.60 166 220 9.0E-13 T 14-10-2018 JV59_22920 1a5e862dd6954a12702c8be3ebdd30c7 274 SUPERFAMILY SSF51215 19 147 1.24E-16 T 14-10-2018 IPR037923 Transcription regulator HTH-like JV59_34575 2d38b5632a30350317e1ca910be2f69f 641 SMART SM00491 477 606 4.2E-46 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 JV59_34575 2d38b5632a30350317e1ca910be2f69f 641 SUPERFAMILY SSF52540 39 600 2.17E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_34575 2d38b5632a30350317e1ca910be2f69f 641 Pfam PF00270 DEAD/DEAH box helicase 29 82 7.5E-6 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JV59_34575 2d38b5632a30350317e1ca910be2f69f 641 Gene3D G3DSA:3.40.50.300 19 287 1.9E-49 T 14-10-2018 JV59_34575 2d38b5632a30350317e1ca910be2f69f 641 Pfam PF13307 Helicase C-terminal domain 462 619 1.1E-34 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 JV59_34575 2d38b5632a30350317e1ca910be2f69f 641 Gene3D G3DSA:3.40.50.300 443 637 6.5E-38 T 14-10-2018 JV59_34575 2d38b5632a30350317e1ca910be2f69f 641 SMART SM00487 17 302 0.0017 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JV59_34575 2d38b5632a30350317e1ca910be2f69f 641 SUPERFAMILY SSF52540 14 235 1.98E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_17085 45ad63950a79c925af52342e3983ff8a 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.1E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_17085 45ad63950a79c925af52342e3983ff8a 295 Pfam PF03466 LysR substrate binding domain 89 293 2.2E-24 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_17085 45ad63950a79c925af52342e3983ff8a 295 SUPERFAMILY SSF46785 7 113 2.95E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_17085 45ad63950a79c925af52342e3983ff8a 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_17085 45ad63950a79c925af52342e3983ff8a 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_17085 45ad63950a79c925af52342e3983ff8a 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_17085 45ad63950a79c925af52342e3983ff8a 295 SUPERFAMILY SSF53850 90 294 3.26E-27 T 14-10-2018 JV59_17085 45ad63950a79c925af52342e3983ff8a 295 Gene3D G3DSA:1.10.10.10 6 93 9.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_17085 45ad63950a79c925af52342e3983ff8a 295 Gene3D G3DSA:3.40.190.10 102 289 1.6E-33 T 14-10-2018 JV59_17085 45ad63950a79c925af52342e3983ff8a 295 Gene3D G3DSA:3.40.190.10 163 262 1.6E-33 T 14-10-2018 JV59_29250 ba19b9373a570a0cda3905a690928a44 262 Pfam PF00440 Bacterial regulatory proteins, tetR family 38 76 6.0E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_29250 ba19b9373a570a0cda3905a690928a44 262 Gene3D G3DSA:1.10.357.10 22 211 1.7E-14 T 14-10-2018 JV59_29250 ba19b9373a570a0cda3905a690928a44 262 SUPERFAMILY SSF46689 29 86 3.08E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_30405 18a5eb81dec9c64ccf22d24811e1094a 389 Gene3D G3DSA:1.25.40.10 177 388 1.7E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_30405 18a5eb81dec9c64ccf22d24811e1094a 389 Gene3D G3DSA:1.25.40.10 26 176 3.9E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_30405 18a5eb81dec9c64ccf22d24811e1094a 389 SUPERFAMILY SSF48452 28 231 1.58E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_16230 6409be62be0b0c548016ae54bccf7588 433 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 82 93 2.5E-8 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 JV59_16230 6409be62be0b0c548016ae54bccf7588 433 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 139 153 2.5E-8 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 JV59_16230 6409be62be0b0c548016ae54bccf7588 433 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 52 60 2.5E-8 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 JV59_16230 6409be62be0b0c548016ae54bccf7588 433 Pfam PF00561 alpha/beta hydrolase fold 50 308 6.2E-22 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_16230 6409be62be0b0c548016ae54bccf7588 433 SUPERFAMILY SSF53474 46 419 2.3E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_31025 54e4ca8743f75a1fa1a04d14cb2ded87 348 Gene3D G3DSA:1.20.950.20 118 335 2.1E-63 T 14-10-2018 JV59_31025 54e4ca8743f75a1fa1a04d14cb2ded87 348 Pfam PF01292 Prokaryotic cytochrome b561 125 306 6.3E-25 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 JV59_31025 54e4ca8743f75a1fa1a04d14cb2ded87 348 SUPERFAMILY SSF81342 119 332 4.32E-45 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 JV59_31025 54e4ca8743f75a1fa1a04d14cb2ded87 348 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 122 326 2.0E-79 T 14-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 JV59_18790 2ec9f571c1bddc5dad3257461a2530ee 401 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 8 377 3.7E-111 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_18790 2ec9f571c1bddc5dad3257461a2530ee 401 Pfam PF03222 Tryptophan/tyrosine permease family 3 387 1.2E-108 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 JV59_18790 2ec9f571c1bddc5dad3257461a2530ee 401 PRINTS PR00166 Aromatic amino acid permease signature 334 353 4.4E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_18790 2ec9f571c1bddc5dad3257461a2530ee 401 PRINTS PR00166 Aromatic amino acid permease signature 279 298 4.4E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_18790 2ec9f571c1bddc5dad3257461a2530ee 401 PRINTS PR00166 Aromatic amino acid permease signature 38 57 4.4E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_18790 2ec9f571c1bddc5dad3257461a2530ee 401 PRINTS PR00166 Aromatic amino acid permease signature 183 205 4.4E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_18790 2ec9f571c1bddc5dad3257461a2530ee 401 PRINTS PR00166 Aromatic amino acid permease signature 313 331 4.4E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_18790 2ec9f571c1bddc5dad3257461a2530ee 401 PRINTS PR00166 Aromatic amino acid permease signature 11 34 4.4E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_18790 2ec9f571c1bddc5dad3257461a2530ee 401 PRINTS PR00166 Aromatic amino acid permease signature 149 169 4.4E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_18790 2ec9f571c1bddc5dad3257461a2530ee 401 PRINTS PR00166 Aromatic amino acid permease signature 83 103 4.4E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_18790 2ec9f571c1bddc5dad3257461a2530ee 401 PRINTS PR00166 Aromatic amino acid permease signature 222 241 4.4E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_18790 2ec9f571c1bddc5dad3257461a2530ee 401 Gene3D G3DSA:1.20.1740.10 3 399 3.6E-8 T 14-10-2018 JV59_30045 1464b8e675eb16bc53892336fbd5541b 205 Pfam PF07603 Protein of unknown function (DUF1566) 53 201 3.8E-18 T 14-10-2018 IPR011460 Protein of unknown function DUF1566 JV59_24510 81fafd4194deca5ec3329a4e6059fa30 134 Gene3D G3DSA:3.90.79.10 1 122 1.1E-22 T 14-10-2018 JV59_24510 81fafd4194deca5ec3329a4e6059fa30 134 Pfam PF00293 NUDIX domain 5 119 2.6E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JV59_24510 81fafd4194deca5ec3329a4e6059fa30 134 SUPERFAMILY SSF55811 4 125 3.38E-23 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JV59_27480 e6b3e7f4d3bfc5a6e004662a10108997 290 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 6 272 31.904 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 JV59_27480 e6b3e7f4d3bfc5a6e004662a10108997 290 Pfam PF00288 GHMP kinases N terminal domain 89 145 9.5E-9 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 JV59_27480 e6b3e7f4d3bfc5a6e004662a10108997 290 Gene3D G3DSA:3.30.230.10 1 160 2.7E-54 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JV59_27480 e6b3e7f4d3bfc5a6e004662a10108997 290 SUPERFAMILY SSF54211 6 158 1.37E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JV59_27480 e6b3e7f4d3bfc5a6e004662a10108997 290 Gene3D G3DSA:3.30.70.890 162 280 8.7E-30 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily JV59_27480 e6b3e7f4d3bfc5a6e004662a10108997 290 SUPERFAMILY SSF55060 162 278 2.78E-36 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily JV59_27480 e6b3e7f4d3bfc5a6e004662a10108997 290 PIRSF PIRSF010376 4 280 3.9E-89 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 JV59_27480 e6b3e7f4d3bfc5a6e004662a10108997 290 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 5 279 1.3E-94 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 JV59_27480 e6b3e7f4d3bfc5a6e004662a10108997 290 Pfam PF08544 GHMP kinases C terminal 198 259 5.7E-7 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain JV59_20005 8a4293696e7b287314ffcce83c1773b6 280 SUPERFAMILY SSF161098 88 272 1.22E-39 T 14-10-2018 IPR035906 MetI-like superfamily JV59_20005 8a4293696e7b287314ffcce83c1773b6 280 Gene3D G3DSA:1.10.3720.10 85 273 1.7E-34 T 14-10-2018 IPR035906 MetI-like superfamily JV59_20005 8a4293696e7b287314ffcce83c1773b6 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 267 6.3E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_20005 8a4293696e7b287314ffcce83c1773b6 280 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 7 272 4.4E-126 T 14-10-2018 IPR017784 ABC transporter, choline, permease protein JV59_16535 e8229d71f0270d83eaaaa19b794edc85 168 SUPERFAMILY SSF46894 22 95 6.8E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_16535 e8229d71f0270d83eaaaa19b794edc85 168 Pfam PF00486 Transcriptional regulatory protein, C terminal 23 94 3.6E-10 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_16535 e8229d71f0270d83eaaaa19b794edc85 168 Gene3D G3DSA:1.10.10.10 4 111 2.9E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_18440 450c45aaf861b7a24730f17b4e0b6d2f 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 261 1.3E-57 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JV59_18440 450c45aaf861b7a24730f17b4e0b6d2f 262 Gene3D G3DSA:3.90.226.10 4 261 1.4E-80 T 14-10-2018 JV59_18440 450c45aaf861b7a24730f17b4e0b6d2f 262 SUPERFAMILY SSF52096 5 261 1.68E-77 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JV59_18440 450c45aaf861b7a24730f17b4e0b6d2f 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 JV59_34015 19ffe9b97649f6991189456e61f6e18f 634 Pfam PF13374 Tetratricopeptide repeat 275 305 5.7E-4 T 14-10-2018 JV59_34015 19ffe9b97649f6991189456e61f6e18f 634 SUPERFAMILY SSF48452 110 227 1.04E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_34015 19ffe9b97649f6991189456e61f6e18f 634 Pfam PF00990 Diguanylate cyclase, GGDEF domain 470 626 2.1E-43 T 14-10-2018 IPR000160 GGDEF domain JV59_34015 19ffe9b97649f6991189456e61f6e18f 634 Gene3D G3DSA:3.30.70.270 463 633 8.2E-54 T 14-10-2018 JV59_34015 19ffe9b97649f6991189456e61f6e18f 634 Pfam PF13176 Tetratricopeptide repeat 360 388 0.0083 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_34015 19ffe9b97649f6991189456e61f6e18f 634 SMART SM00267 458 630 5.8E-56 T 14-10-2018 IPR000160 GGDEF domain JV59_34015 19ffe9b97649f6991189456e61f6e18f 634 SUPERFAMILY SSF48452 193 410 2.47E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_34015 19ffe9b97649f6991189456e61f6e18f 634 Gene3D G3DSA:1.25.40.10 233 404 1.4E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_34015 19ffe9b97649f6991189456e61f6e18f 634 SMART SM00028 152 185 460.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_34015 19ffe9b97649f6991189456e61f6e18f 634 SMART SM00028 316 349 230.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_34015 19ffe9b97649f6991189456e61f6e18f 634 SMART SM00028 192 225 0.37 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_34015 19ffe9b97649f6991189456e61f6e18f 634 SMART SM00028 358 391 87.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_34015 19ffe9b97649f6991189456e61f6e18f 634 SMART SM00028 234 267 84.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_34015 19ffe9b97649f6991189456e61f6e18f 634 Gene3D G3DSA:1.25.40.10 110 232 3.5E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_34015 19ffe9b97649f6991189456e61f6e18f 634 SUPERFAMILY SSF55073 474 630 2.12E-44 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_34015 19ffe9b97649f6991189456e61f6e18f 634 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 465 628 4.1E-47 T 14-10-2018 IPR000160 GGDEF domain JV59_34015 19ffe9b97649f6991189456e61f6e18f 634 Pfam PF13424 Tetratricopeptide repeat 153 224 2.5E-9 T 14-10-2018 JV59_34780 cd71e04db3de43ca5fa13784296f7c7d 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 278 6.4E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_34780 cd71e04db3de43ca5fa13784296f7c7d 285 SUPERFAMILY SSF161098 7 285 6.92E-66 T 14-10-2018 IPR035906 MetI-like superfamily JV59_34780 cd71e04db3de43ca5fa13784296f7c7d 285 Gene3D G3DSA:1.10.3720.10 1 276 5.5E-55 T 14-10-2018 IPR035906 MetI-like superfamily JV59_20945 e3f882d5b6f787c125eb54d83d248f11 204 PIRSF PIRSF006324 1 204 9.3E-41 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_20945 e3f882d5b6f787c125eb54d83d248f11 204 Pfam PF01810 LysE type translocator 18 202 1.0E-25 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_18950 7981bd772ae769b2bb26b5455fa87875 382 SUPERFAMILY SSF56796 3 379 3.79E-95 T 14-10-2018 JV59_18950 7981bd772ae769b2bb26b5455fa87875 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 353 7.6E-80 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 JV59_18950 7981bd772ae769b2bb26b5455fa87875 382 Gene3D G3DSA:1.20.1090.10 181 381 3.3E-32 T 14-10-2018 JV59_18950 7981bd772ae769b2bb26b5455fa87875 382 Gene3D G3DSA:3.40.50.1970 1 180 4.3E-50 T 14-10-2018 JV59_18975 8b1bc2c4f9059c3e49d56eff6b329523 316 Pfam PF00294 pfkB family carbohydrate kinase 25 293 1.1E-49 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB JV59_18975 8b1bc2c4f9059c3e49d56eff6b329523 316 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 2.5E-103 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 JV59_18975 8b1bc2c4f9059c3e49d56eff6b329523 316 SUPERFAMILY SSF53613 6 294 1.87E-68 T 14-10-2018 IPR029056 Ribokinase-like JV59_18975 8b1bc2c4f9059c3e49d56eff6b329523 316 Gene3D G3DSA:3.40.1190.20 2 310 2.3E-93 T 14-10-2018 IPR029056 Ribokinase-like JV59_18975 8b1bc2c4f9059c3e49d56eff6b329523 316 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 JV59_18975 8b1bc2c4f9059c3e49d56eff6b329523 316 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 309 6.5E-104 T 14-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 JV59_18975 8b1bc2c4f9059c3e49d56eff6b329523 316 PIRSF PIRSF000535 2 311 9.8E-97 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 JV59_01450 399f8765904a04739c8535e92a61a84a 173 PIRSF PIRSF038996 1 172 1.1E-57 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 JV59_01450 399f8765904a04739c8535e92a61a84a 173 TIGRFAM TIGR01752 flav_long: flavodoxin 2 167 9.3E-67 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 JV59_01450 399f8765904a04739c8535e92a61a84a 173 Gene3D G3DSA:3.40.50.360 1 173 4.3E-49 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_01450 399f8765904a04739c8535e92a61a84a 173 Pfam PF00258 Flavodoxin 5 161 6.2E-27 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 JV59_01450 399f8765904a04739c8535e92a61a84a 173 SUPERFAMILY SSF52218 1 166 3.42E-48 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_33595 ca056552d488a74ad2bd88013d6466eb 670 Gene3D G3DSA:1.10.287.950 340 670 6.5E-76 T 14-10-2018 JV59_33595 ca056552d488a74ad2bd88013d6466eb 670 SMART SM00304 463 519 100.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_33595 ca056552d488a74ad2bd88013d6466eb 670 SMART SM00304 340 393 5.3E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_33595 ca056552d488a74ad2bd88013d6466eb 670 Pfam PF00672 HAMP domain 343 389 7.4E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_33595 ca056552d488a74ad2bd88013d6466eb 670 SMART SM00283 408 669 4.9E-79 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_33595 ca056552d488a74ad2bd88013d6466eb 670 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 454 636 8.8E-49 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_33595 ca056552d488a74ad2bd88013d6466eb 670 SUPERFAMILY SSF58104 366 670 9.55E-79 T 14-10-2018 JV59_00045 9c62259651d2186dbf2a38aa15f01e8e 242 Pfam PF08534 Redoxin 5 160 1.2E-32 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 JV59_00045 9c62259651d2186dbf2a38aa15f01e8e 242 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 242 6.6E-42 T 14-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 JV59_00045 9c62259651d2186dbf2a38aa15f01e8e 242 Gene3D G3DSA:3.40.30.10 4 166 3.7E-63 T 14-10-2018 JV59_00045 9c62259651d2186dbf2a38aa15f01e8e 242 PRINTS PR00160 Glutaredoxin signature 228 241 5.0E-14 T 14-10-2018 IPR014025 Glutaredoxin subgroup JV59_00045 9c62259651d2186dbf2a38aa15f01e8e 242 PRINTS PR00160 Glutaredoxin signature 214 227 5.0E-14 T 14-10-2018 IPR014025 Glutaredoxin subgroup JV59_00045 9c62259651d2186dbf2a38aa15f01e8e 242 PRINTS PR00160 Glutaredoxin signature 173 191 5.0E-14 T 14-10-2018 IPR014025 Glutaredoxin subgroup JV59_00045 9c62259651d2186dbf2a38aa15f01e8e 242 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 JV59_00045 9c62259651d2186dbf2a38aa15f01e8e 242 SUPERFAMILY SSF52833 2 241 1.35E-49 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_00045 9c62259651d2186dbf2a38aa15f01e8e 242 Gene3D G3DSA:3.40.30.10 171 241 5.0E-23 T 14-10-2018 JV59_00045 9c62259651d2186dbf2a38aa15f01e8e 242 Pfam PF00462 Glutaredoxin 173 231 8.2E-19 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 JV59_33930 7aaf475b55e758c8c31c341f38ec7dff 529 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 515 2.6E-296 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 JV59_33930 7aaf475b55e758c8c31c341f38ec7dff 529 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 516 0.0 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 JV59_33930 7aaf475b55e758c8c31c341f38ec7dff 529 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 529 376.855 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 JV59_34590 d6b9ffc750ba8a2803fba5e925ecccf9 667 SUPERFAMILY SSF51395 2 356 4.51E-108 T 14-10-2018 JV59_34590 d6b9ffc750ba8a2803fba5e925ecccf9 667 Gene3D G3DSA:3.40.50.720 374 661 3.9E-107 T 14-10-2018 JV59_34590 d6b9ffc750ba8a2803fba5e925ecccf9 667 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 375 627 6.4E-24 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JV59_34590 d6b9ffc750ba8a2803fba5e925ecccf9 667 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 326 3.6E-81 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 JV59_34590 d6b9ffc750ba8a2803fba5e925ecccf9 667 Gene3D G3DSA:3.50.50.60 468 620 3.9E-107 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_34590 d6b9ffc750ba8a2803fba5e925ecccf9 667 PRINTS PR00419 Adrenodoxin reductase family signature 375 397 1.3E-10 T 14-10-2018 JV59_34590 d6b9ffc750ba8a2803fba5e925ecccf9 667 PRINTS PR00419 Adrenodoxin reductase family signature 398 411 1.3E-10 T 14-10-2018 JV59_34590 d6b9ffc750ba8a2803fba5e925ecccf9 667 Gene3D G3DSA:3.20.20.70 1 368 1.1E-120 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_34590 d6b9ffc750ba8a2803fba5e925ecccf9 667 SUPERFAMILY SSF51971 373 622 2.12E-40 T 14-10-2018 JV59_23420 5dcb0ff6078cb6ab1c24efd32151b002 168 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 2 154 5.8E-13 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase JV59_23420 5dcb0ff6078cb6ab1c24efd32151b002 168 Gene3D G3DSA:3.30.530.20 1 154 4.3E-16 T 14-10-2018 IPR023393 START-like domain superfamily JV59_23420 5dcb0ff6078cb6ab1c24efd32151b002 168 SUPERFAMILY SSF55961 1 154 2.09E-15 T 14-10-2018 JV59_18875 d96dfaac8ae8a03ee84d1b6ede8c3aa8 434 SUPERFAMILY SSF53613 36 416 9.49E-43 T 14-10-2018 IPR029056 Ribokinase-like JV59_18875 d96dfaac8ae8a03ee84d1b6ede8c3aa8 434 Pfam PF00294 pfkB family carbohydrate kinase 138 294 3.5E-11 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB JV59_19105 a16a32efa394b0c443bb6881c554e12e 329 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 329 33.416 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JV59_19105 a16a32efa394b0c443bb6881c554e12e 329 Gene3D G3DSA:3.30.470.20 104 319 1.3E-83 T 14-10-2018 JV59_19105 a16a32efa394b0c443bb6881c554e12e 329 PIRSF PIRSF039102 1 329 2.6E-78 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JV59_19105 a16a32efa394b0c443bb6881c554e12e 329 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 327 4.2E-100 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JV59_19105 a16a32efa394b0c443bb6881c554e12e 329 SUPERFAMILY SSF52440 5 114 2.3E-25 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JV59_19105 a16a32efa394b0c443bb6881c554e12e 329 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 82 93 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JV59_19105 a16a32efa394b0c443bb6881c554e12e 329 Pfam PF01820 D-ala D-ala ligase N-terminus 6 105 1.5E-20 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JV59_19105 a16a32efa394b0c443bb6881c554e12e 329 Gene3D G3DSA:3.40.50.20 19 324 1.3E-83 T 14-10-2018 JV59_19105 a16a32efa394b0c443bb6881c554e12e 329 Gene3D G3DSA:3.30.1490.20 131 198 1.3E-83 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JV59_19105 a16a32efa394b0c443bb6881c554e12e 329 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 271 299 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JV59_19105 a16a32efa394b0c443bb6881c554e12e 329 SUPERFAMILY SSF56059 115 325 7.86E-43 T 14-10-2018 JV59_19105 a16a32efa394b0c443bb6881c554e12e 329 Pfam PF07478 D-ala D-ala ligase C-terminus 125 323 9.0E-54 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JV59_35295 2e05de64f6ead7430140234cceb57cf4 146 Pfam PF03918 Cytochrome C biogenesis protein 25 142 4.6E-41 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family JV59_35295 2e05de64f6ead7430140234cceb57cf4 146 Gene3D G3DSA:1.10.8.640 33 118 3.1E-31 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily JV59_39550 17d710ea414065256a6d735c35248466 397 Gene3D G3DSA:1.10.8.260 265 325 2.1E-127 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily JV59_39550 17d710ea414065256a6d735c35248466 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 365 372 1.0E-8 T 14-10-2018 JV59_39550 17d710ea414065256a6d735c35248466 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 167 1.0E-8 T 14-10-2018 JV59_39550 17d710ea414065256a6d735c35248466 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.0E-8 T 14-10-2018 JV59_39550 17d710ea414065256a6d735c35248466 397 SUPERFAMILY SSF160996 193 341 1.05E-41 T 14-10-2018 JV59_39550 17d710ea414065256a6d735c35248466 397 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 395 2.8E-127 T 14-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like JV59_39550 17d710ea414065256a6d735c35248466 397 Pfam PF03486 HI0933-like protein 5 395 3.6E-153 T 14-10-2018 JV59_39550 17d710ea414065256a6d735c35248466 397 Gene3D G3DSA:3.50.50.60 8 391 2.1E-127 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_39550 17d710ea414065256a6d735c35248466 397 SUPERFAMILY SSF51905 1 397 3.59E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_39550 17d710ea414065256a6d735c35248466 397 Gene3D G3DSA:2.40.30.10 191 342 2.1E-127 T 14-10-2018 JV59_21345 8edfc5c6afd66509c1e4db330b487ef8 460 Gene3D G3DSA:3.50.50.60 5 319 1.2E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_21345 8edfc5c6afd66509c1e4db330b487ef8 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 151 176 1.4E-9 T 14-10-2018 JV59_21345 8edfc5c6afd66509c1e4db330b487ef8 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.4E-9 T 14-10-2018 JV59_21345 8edfc5c6afd66509c1e4db330b487ef8 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 303 310 1.4E-9 T 14-10-2018 JV59_21345 8edfc5c6afd66509c1e4db330b487ef8 460 PIRSF PIRSF037495 1 460 5.3E-129 T 14-10-2018 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 JV59_21345 8edfc5c6afd66509c1e4db330b487ef8 460 Gene3D G3DSA:1.10.10.1100 367 439 1.3E-17 T 14-10-2018 JV59_21345 8edfc5c6afd66509c1e4db330b487ef8 460 Pfam PF04324 BFD-like [2Fe-2S] binding domain 381 424 2.5E-7 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain JV59_21345 8edfc5c6afd66509c1e4db330b487ef8 460 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 321 6.2E-26 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JV59_21345 8edfc5c6afd66509c1e4db330b487ef8 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 151 169 4.2E-16 T 14-10-2018 JV59_21345 8edfc5c6afd66509c1e4db330b487ef8 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 288 310 4.2E-16 T 14-10-2018 JV59_21345 8edfc5c6afd66509c1e4db330b487ef8 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 4.2E-16 T 14-10-2018 JV59_21345 8edfc5c6afd66509c1e4db330b487ef8 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 4.2E-16 T 14-10-2018 JV59_21345 8edfc5c6afd66509c1e4db330b487ef8 460 SUPERFAMILY SSF51905 1 332 9.27E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_21345 8edfc5c6afd66509c1e4db330b487ef8 460 Gene3D G3DSA:3.50.50.60 119 265 1.2E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_28485 9dcfa930ffbfe69164fea23f1942f58d 73 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 1.8E-28 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JV59_28485 9dcfa930ffbfe69164fea23f1942f58d 73 SMART SM00357 3 67 1.9E-27 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 JV59_28485 9dcfa930ffbfe69164fea23f1942f58d 73 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 3.6E-42 T 14-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 JV59_28485 9dcfa930ffbfe69164fea23f1942f58d 73 PIRSF PIRSF002599 1 73 3.6E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 JV59_28485 9dcfa930ffbfe69164fea23f1942f58d 73 SUPERFAMILY SSF50249 1 67 9.43E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_28485 9dcfa930ffbfe69164fea23f1942f58d 73 Gene3D G3DSA:2.40.50.140 1 65 7.5E-27 T 14-10-2018 JV59_28485 9dcfa930ffbfe69164fea23f1942f58d 73 PRINTS PR00050 Cold shock protein signature 25 34 9.5E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JV59_28485 9dcfa930ffbfe69164fea23f1942f58d 73 PRINTS PR00050 Cold shock protein signature 4 19 9.5E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JV59_28485 9dcfa930ffbfe69164fea23f1942f58d 73 PRINTS PR00050 Cold shock protein signature 40 58 9.5E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JV59_28485 9dcfa930ffbfe69164fea23f1942f58d 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site JV59_27085 b5bf40285f64e537c8e4131b34895ab3 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JV59_27085 b5bf40285f64e537c8e4131b34895ab3 373 Pfam PF01098 Cell cycle protein 24 367 5.1E-113 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JV59_27085 b5bf40285f64e537c8e4131b34895ab3 373 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 16 369 28.254 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JV59_27085 b5bf40285f64e537c8e4131b34895ab3 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 6.7E-135 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JV59_16435 02f5918ddc54fd247ff711ebdb01a8c9 302 Pfam PF00248 Aldo/keto reductase family 17 291 1.7E-56 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain JV59_16435 02f5918ddc54fd247ff711ebdb01a8c9 302 SUPERFAMILY SSF51430 6 293 1.31E-68 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily JV59_16435 02f5918ddc54fd247ff711ebdb01a8c9 302 Gene3D G3DSA:3.20.20.100 1 302 9.5E-100 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily JV59_01355 96903b9afaab4f2957a36e3ef8f032ac 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 5 207 6.6E-79 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 JV59_01355 96903b9afaab4f2957a36e3ef8f032ac 208 SUPERFAMILY SSF53335 14 204 1.82E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_01355 96903b9afaab4f2957a36e3ef8f032ac 208 Gene3D G3DSA:3.40.50.150 1 207 1.9E-73 T 14-10-2018 JV59_01355 96903b9afaab4f2957a36e3ef8f032ac 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 37.991 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 JV59_01355 96903b9afaab4f2957a36e3ef8f032ac 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 JV59_01355 96903b9afaab4f2957a36e3ef8f032ac 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 205 1.2E-66 T 14-10-2018 JV59_29290 d8daf0f6b3c1b60c562b90c64845918f 168 Pfam PF09933 Predicted small integral membrane protein (DUF2165) 9 162 9.9E-48 T 14-10-2018 IPR018681 Protein of unknown function DUF2165, transmembrane JV59_38675 2d275c440d2e0a621fe4766f93ec8b43 196 SUPERFAMILY SSF48498 81 191 1.33E-10 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JV59_38675 2d275c440d2e0a621fe4766f93ec8b43 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 58 1.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_38675 2d275c440d2e0a621fe4766f93ec8b43 196 SUPERFAMILY SSF46689 4 78 2.1E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_38675 2d275c440d2e0a621fe4766f93ec8b43 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 41.143 T 14-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 JV59_38675 2d275c440d2e0a621fe4766f93ec8b43 196 Gene3D G3DSA:1.10.357.10 3 196 3.1E-78 T 14-10-2018 JV59_38675 2d275c440d2e0a621fe4766f93ec8b43 196 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 56 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JV59_36020 e57f265e6821d15f35fdd5f1b5862bc3 204 SUPERFAMILY SSF46689 6 80 1.95E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_36020 e57f265e6821d15f35fdd5f1b5862bc3 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 62 1.7E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_36020 e57f265e6821d15f35fdd5f1b5862bc3 204 SUPERFAMILY SSF48498 85 196 1.0E-19 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JV59_36020 e57f265e6821d15f35fdd5f1b5862bc3 204 Gene3D G3DSA:1.10.10.60 6 59 5.3E-13 T 14-10-2018 JV59_36020 e57f265e6821d15f35fdd5f1b5862bc3 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 4.4E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_36020 e57f265e6821d15f35fdd5f1b5862bc3 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 4.4E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_36020 e57f265e6821d15f35fdd5f1b5862bc3 204 Gene3D G3DSA:1.10.357.10 60 198 1.6E-24 T 14-10-2018 JV59_00135 44a5538ff0de5e34b47c802b8efb7585 228 Gene3D G3DSA:3.40.50.12740 2 132 1.2E-40 T 14-10-2018 JV59_00135 44a5538ff0de5e34b47c802b8efb7585 228 Pfam PF00072 Response regulator receiver domain 4 112 5.0E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_00135 44a5538ff0de5e34b47c802b8efb7585 228 SUPERFAMILY SSF52172 1 121 3.7E-39 T 14-10-2018 IPR011006 CheY-like superfamily JV59_00135 44a5538ff0de5e34b47c802b8efb7585 228 SUPERFAMILY SSF46894 123 225 9.07E-24 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_00135 44a5538ff0de5e34b47c802b8efb7585 228 SMART SM00448 2 111 5.0E-43 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_00135 44a5538ff0de5e34b47c802b8efb7585 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 224 4.0E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_00135 44a5538ff0de5e34b47c802b8efb7585 228 SMART SM00862 148 224 3.5E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_00135 44a5538ff0de5e34b47c802b8efb7585 228 Gene3D G3DSA:1.10.10.10 133 228 1.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_01620 accab726781cb478725cb3583c745af0 291 Gene3D G3DSA:3.30.420.40 4 114 5.5E-70 T 14-10-2018 JV59_01620 accab726781cb478725cb3583c745af0 291 SUPERFAMILY SSF53067 1 112 1.2E-26 T 14-10-2018 JV59_01620 accab726781cb478725cb3583c745af0 291 Gene3D G3DSA:3.30.420.40 115 261 5.5E-70 T 14-10-2018 JV59_01620 accab726781cb478725cb3583c745af0 291 SUPERFAMILY SSF53067 114 283 1.17E-41 T 14-10-2018 JV59_01620 accab726781cb478725cb3583c745af0 291 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 283 3.5E-44 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 JV59_17610 590f39897365cb5195427c773991cf90 596 SUPERFAMILY SSF48452 348 445 1.35E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_17610 590f39897365cb5195427c773991cf90 596 Gene3D G3DSA:1.25.40.10 334 457 2.6E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_17610 590f39897365cb5195427c773991cf90 596 SMART SM00028 396 429 2.1E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_17610 590f39897365cb5195427c773991cf90 596 SUPERFAMILY SSF53300 88 295 1.56E-17 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JV59_17610 590f39897365cb5195427c773991cf90 596 Gene3D G3DSA:3.40.50.410 86 286 1.8E-27 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JV59_17610 590f39897365cb5195427c773991cf90 596 Pfam PF07719 Tetratricopeptide repeat 400 429 4.0E-5 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 JV59_17610 590f39897365cb5195427c773991cf90 596 Pfam PF13519 von Willebrand factor type A domain 89 195 7.4E-14 T 14-10-2018 IPR002035 von Willebrand factor, type A JV59_19365 eb03ca8738a5aca8d7c344c455c935ee 637 SMART SM00052 373 618 3.7E-98 T 14-10-2018 IPR001633 EAL domain JV59_19365 eb03ca8738a5aca8d7c344c455c935ee 637 SMART SM00267 192 363 5.5E-6 T 14-10-2018 IPR000160 GGDEF domain JV59_19365 eb03ca8738a5aca8d7c344c455c935ee 637 SUPERFAMILY SSF55073 209 360 4.0E-13 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_19365 eb03ca8738a5aca8d7c344c455c935ee 637 SUPERFAMILY SSF55781 19 164 2.67E-18 T 14-10-2018 JV59_19365 eb03ca8738a5aca8d7c344c455c935ee 637 SMART SM00065 14 161 0.0014 T 14-10-2018 IPR003018 GAF domain GO:0005515 JV59_19365 eb03ca8738a5aca8d7c344c455c935ee 637 Gene3D G3DSA:3.30.70.270 197 376 5.3E-16 T 14-10-2018 JV59_19365 eb03ca8738a5aca8d7c344c455c935ee 637 Pfam PF00563 EAL domain 381 613 7.8E-68 T 14-10-2018 IPR001633 EAL domain JV59_19365 eb03ca8738a5aca8d7c344c455c935ee 637 SUPERFAMILY SSF141868 378 627 4.05E-82 T 14-10-2018 IPR035919 EAL domain superfamily JV59_19365 eb03ca8738a5aca8d7c344c455c935ee 637 Gene3D G3DSA:3.30.450.40 14 158 4.0E-11 T 14-10-2018 IPR029016 GAF-like domain superfamily JV59_19365 eb03ca8738a5aca8d7c344c455c935ee 637 Pfam PF00990 Diguanylate cyclase, GGDEF domain 205 358 7.0E-15 T 14-10-2018 IPR000160 GGDEF domain JV59_19365 eb03ca8738a5aca8d7c344c455c935ee 637 Gene3D G3DSA:3.20.20.450 377 626 1.0E-86 T 14-10-2018 IPR035919 EAL domain superfamily JV59_35520 cc4e745ce4d667b66bf1e05dac99f517 429 Gene3D G3DSA:1.10.580.10 57 411 6.3E-150 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 JV59_35520 cc4e745ce4d667b66bf1e05dac99f517 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 JV59_35520 cc4e745ce4d667b66bf1e05dac99f517 429 PRINTS PR00143 Citrate synthase signature 241 269 3.6E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 JV59_35520 cc4e745ce4d667b66bf1e05dac99f517 429 PRINTS PR00143 Citrate synthase signature 296 316 3.6E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 JV59_35520 cc4e745ce4d667b66bf1e05dac99f517 429 PRINTS PR00143 Citrate synthase signature 219 234 3.6E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 JV59_35520 cc4e745ce4d667b66bf1e05dac99f517 429 PRINTS PR00143 Citrate synthase signature 379 393 3.6E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 JV59_35520 cc4e745ce4d667b66bf1e05dac99f517 429 PRINTS PR00143 Citrate synthase signature 359 375 3.6E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 JV59_35520 cc4e745ce4d667b66bf1e05dac99f517 429 PRINTS PR00143 Citrate synthase signature 165 178 3.6E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 JV59_35520 cc4e745ce4d667b66bf1e05dac99f517 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 5.7E-135 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 JV59_35520 cc4e745ce4d667b66bf1e05dac99f517 429 Gene3D G3DSA:2.20.28.60 1 50 6.3E-26 T 14-10-2018 JV59_35520 cc4e745ce4d667b66bf1e05dac99f517 429 Gene3D G3DSA:1.10.230.10 268 376 6.3E-150 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain JV59_35520 cc4e745ce4d667b66bf1e05dac99f517 429 SUPERFAMILY SSF48256 4 428 2.49E-170 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 JV59_35520 cc4e745ce4d667b66bf1e05dac99f517 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 422 6.7E-239 T 14-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 JV59_35520 cc4e745ce4d667b66bf1e05dac99f517 429 PIRSF PIRSF001369 38 429 3.1E-174 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type JV59_35070 520e9bdedad5a4aec9708a00a20b6d53 421 Gene3D G3DSA:3.40.1190.10 1 288 4.8E-93 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JV59_35070 520e9bdedad5a4aec9708a00a20b6d53 421 PIRSF PIRSF001563 6 421 9.6E-111 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 JV59_35070 520e9bdedad5a4aec9708a00a20b6d53 421 Pfam PF02875 Mur ligase family, glutamate ligase domain 288 340 9.0E-8 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 JV59_35070 520e9bdedad5a4aec9708a00a20b6d53 421 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 JV59_35070 520e9bdedad5a4aec9708a00a20b6d53 421 Pfam PF08245 Mur ligase middle domain 54 194 8.1E-8 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 JV59_35070 520e9bdedad5a4aec9708a00a20b6d53 421 SUPERFAMILY SSF53244 289 417 1.14E-31 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JV59_35070 520e9bdedad5a4aec9708a00a20b6d53 421 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 415 2.1E-108 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 JV59_35070 520e9bdedad5a4aec9708a00a20b6d53 421 Gene3D G3DSA:3.90.190.20 289 420 3.3E-35 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JV59_35070 520e9bdedad5a4aec9708a00a20b6d53 421 SUPERFAMILY SSF53623 15 285 5.63E-86 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JV59_33765 37fc9d6c13788c070c676d87b8f4d072 758 PIRSF PIRSF000379 5 758 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 JV59_33765 37fc9d6c13788c070c676d87b8f4d072 758 SUPERFAMILY SSF51998 4 757 1.26E-290 T 14-10-2018 JV59_33765 37fc9d6c13788c070c676d87b8f4d072 758 Gene3D G3DSA:3.20.70.20 1 758 0.0 T 14-10-2018 JV59_33765 37fc9d6c13788c070c676d87b8f4d072 758 Pfam PF02901 Pyruvate formate lyase-like 21 612 1.2E-206 T 14-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 JV59_33765 37fc9d6c13788c070c676d87b8f4d072 758 ProSitePatterns PS00850 Glycine radical domain signature. 728 736 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site JV59_33765 37fc9d6c13788c070c676d87b8f4d072 758 Pfam PF01228 Glycine radical 628 739 3.4E-43 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 JV59_33765 37fc9d6c13788c070c676d87b8f4d072 758 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 8 758 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 JV59_37830 2c948a96936ceadbaa5f2a4e02e0f147 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 5.1E-69 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 JV59_37830 2c948a96936ceadbaa5f2a4e02e0f147 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 34.483 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 JV59_37830 2c948a96936ceadbaa5f2a4e02e0f147 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 75 6.1E-29 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 JV59_37830 2c948a96936ceadbaa5f2a4e02e0f147 167 SUPERFAMILY SSF54768 8 76 5.86E-24 T 14-10-2018 JV59_37830 2c948a96936ceadbaa5f2a4e02e0f147 167 SUPERFAMILY SSF54211 80 159 4.55E-27 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JV59_37830 2c948a96936ceadbaa5f2a4e02e0f147 167 Gene3D G3DSA:3.30.230.10 75 167 6.8E-37 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JV59_37830 2c948a96936ceadbaa5f2a4e02e0f147 167 Gene3D G3DSA:3.30.160.20 2 73 1.2E-31 T 14-10-2018 JV59_37830 2c948a96936ceadbaa5f2a4e02e0f147 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site JV59_37830 2c948a96936ceadbaa5f2a4e02e0f147 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 2.6E-30 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 JV59_39760 9c01532873251744a19c4f51360639a0 310 SUPERFAMILY SSF110997 72 142 1.7E-7 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 JV59_39760 9c01532873251744a19c4f51360639a0 310 Pfam PF05036 Sporulation related domain 72 141 5.6E-8 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 JV59_31130 e36c3713735651d4f6e13711d22afd29 475 Gene3D G3DSA:1.20.210.10 4 472 1.4E-204 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_31130 e36c3713735651d4f6e13711d22afd29 475 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 466 2.6E-228 T 14-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 JV59_31130 e36c3713735651d4f6e13711d22afd29 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 445 7.9E-115 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_31130 e36c3713735651d4f6e13711d22afd29 475 SUPERFAMILY SSF81442 11 465 1.24E-120 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_31130 e36c3713735651d4f6e13711d22afd29 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 205 260 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_21380 5abb43767c1987929905b8dee4dcd287 403 SUPERFAMILY SSF103473 13 400 7.98E-42 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_21380 5abb43767c1987929905b8dee4dcd287 403 Gene3D G3DSA:1.20.1250.20 10 398 2.0E-36 T 14-10-2018 JV59_21380 5abb43767c1987929905b8dee4dcd287 403 Pfam PF07690 Major Facilitator Superfamily 20 285 3.3E-22 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_22340 3636750bc10d0c1689f9e5c47a70732b 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_22340 3636750bc10d0c1689f9e5c47a70732b 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_22340 3636750bc10d0c1689f9e5c47a70732b 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_22340 3636750bc10d0c1689f9e5c47a70732b 258 Pfam PF00106 short chain dehydrogenase 4 191 1.1E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_22340 3636750bc10d0c1689f9e5c47a70732b 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.3E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_22340 3636750bc10d0c1689f9e5c47a70732b 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.3E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_22340 3636750bc10d0c1689f9e5c47a70732b 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.3E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_22340 3636750bc10d0c1689f9e5c47a70732b 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.3E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_22340 3636750bc10d0c1689f9e5c47a70732b 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.3E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_22340 3636750bc10d0c1689f9e5c47a70732b 258 SUPERFAMILY SSF51735 4 223 4.8E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_22340 3636750bc10d0c1689f9e5c47a70732b 258 PIRSF PIRSF000126 1 258 1.9E-67 T 14-10-2018 JV59_22340 3636750bc10d0c1689f9e5c47a70732b 258 Gene3D G3DSA:3.40.50.720 3 250 9.6E-61 T 14-10-2018 JV59_34660 9263cfd50ae73d160c67a94b6b0199be 398 Gene3D G3DSA:3.40.50.150 106 253 3.5E-5 T 14-10-2018 JV59_34660 9263cfd50ae73d160c67a94b6b0199be 398 SUPERFAMILY SSF53335 117 212 1.46E-7 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_34660 9263cfd50ae73d160c67a94b6b0199be 398 Pfam PF13679 Methyltransferase domain 114 230 4.3E-16 T 14-10-2018 IPR025714 Methyltransferase domain JV59_28160 d0f66870ab9b2b4684b3364ff2d987a3 280 Pfam PF00520 Ion transport protein 24 236 1.2E-30 T 14-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 JV59_28160 d0f66870ab9b2b4684b3364ff2d987a3 280 SUPERFAMILY SSF81324 23 236 4.28E-52 T 14-10-2018 JV59_28160 d0f66870ab9b2b4684b3364ff2d987a3 280 PRINTS PR00169 Potassium channel signature 58 81 3.8E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 JV59_28160 d0f66870ab9b2b4684b3364ff2d987a3 280 PRINTS PR00169 Potassium channel signature 84 104 3.8E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 JV59_28160 d0f66870ab9b2b4684b3364ff2d987a3 280 PRINTS PR00169 Potassium channel signature 16 44 3.8E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 JV59_28160 d0f66870ab9b2b4684b3364ff2d987a3 280 PRINTS PR00169 Potassium channel signature 178 200 3.8E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 JV59_28160 d0f66870ab9b2b4684b3364ff2d987a3 280 PRINTS PR00169 Potassium channel signature 120 146 3.8E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 JV59_28160 d0f66870ab9b2b4684b3364ff2d987a3 280 PRINTS PR00169 Potassium channel signature 207 233 3.8E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 JV59_28160 d0f66870ab9b2b4684b3364ff2d987a3 280 PRINTS PR00169 Potassium channel signature 149 172 3.8E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 JV59_28160 d0f66870ab9b2b4684b3364ff2d987a3 280 Gene3D G3DSA:1.10.287.70 23 236 1.7E-57 T 14-10-2018 JV59_34275 c975e6aba090183a59f7d76e00173fda 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 1.9E-93 T 14-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 JV59_34275 c975e6aba090183a59f7d76e00173fda 286 SUPERFAMILY SSF54637 6 114 4.17E-40 T 14-10-2018 IPR029069 HotDog domain superfamily JV59_34275 c975e6aba090183a59f7d76e00173fda 286 Gene3D G3DSA:3.10.129.90 2 286 1.2E-106 T 14-10-2018 JV59_34275 c975e6aba090183a59f7d76e00173fda 286 SUPERFAMILY SSF54637 116 283 8.46E-57 T 14-10-2018 IPR029069 HotDog domain superfamily JV59_34275 c975e6aba090183a59f7d76e00173fda 286 Pfam PF13622 Thioesterase-like superfamily 33 282 1.2E-59 T 14-10-2018 JV59_16895 31b23af3d23d6003a7a2555ba981914f 218 SUPERFAMILY SSF52172 1 118 4.55E-36 T 14-10-2018 IPR011006 CheY-like superfamily JV59_16895 31b23af3d23d6003a7a2555ba981914f 218 SUPERFAMILY SSF46894 118 216 3.68E-25 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_16895 31b23af3d23d6003a7a2555ba981914f 218 Pfam PF00072 Response regulator receiver domain 3 111 2.5E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_16895 31b23af3d23d6003a7a2555ba981914f 218 SMART SM00448 1 112 5.7E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_16895 31b23af3d23d6003a7a2555ba981914f 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 215 1.9E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_16895 31b23af3d23d6003a7a2555ba981914f 218 SMART SM00862 145 216 3.8E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_16895 31b23af3d23d6003a7a2555ba981914f 218 Gene3D G3DSA:1.10.10.10 122 218 3.3E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_16895 31b23af3d23d6003a7a2555ba981914f 218 Gene3D G3DSA:3.40.50.2300 1 121 8.3E-40 T 14-10-2018 JV59_36835 a81541cbc1e9ac27f926644a884d3c76 397 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 262 291 2.1E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_36835 a81541cbc1e9ac27f926644a884d3c76 397 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 47 67 2.1E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_36835 a81541cbc1e9ac27f926644a884d3c76 397 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 233 260 2.1E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_36835 a81541cbc1e9ac27f926644a884d3c76 397 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 181 363 4.5E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_36835 a81541cbc1e9ac27f926644a884d3c76 397 SMART SM00283 135 396 1.7E-70 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_36835 a81541cbc1e9ac27f926644a884d3c76 397 Gene3D G3DSA:1.10.287.950 69 397 2.6E-69 T 14-10-2018 JV59_36835 a81541cbc1e9ac27f926644a884d3c76 397 SMART SM00304 68 120 1.8E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_36835 a81541cbc1e9ac27f926644a884d3c76 397 SUPERFAMILY SSF58104 88 397 1.02E-75 T 14-10-2018 JV59_24230 8a8ccc08a761ca10fdad1699d547ea37 805 Gene3D G3DSA:1.10.1740.190 304 450 9.8E-34 T 14-10-2018 JV59_24230 8a8ccc08a761ca10fdad1699d547ea37 805 Gene3D G3DSA:2.60.120.380 709 805 5.5E-5 T 14-10-2018 JV59_24230 8a8ccc08a761ca10fdad1699d547ea37 805 Gene3D G3DSA:2.60.120.380 591 690 1.8E-9 T 14-10-2018 JV59_24230 8a8ccc08a761ca10fdad1699d547ea37 805 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 393 409 4.5E-28 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 JV59_24230 8a8ccc08a761ca10fdad1699d547ea37 805 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 435 453 4.5E-28 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 JV59_24230 8a8ccc08a761ca10fdad1699d547ea37 805 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 459 474 4.5E-28 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 JV59_24230 8a8ccc08a761ca10fdad1699d547ea37 805 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 98 116 4.5E-28 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 JV59_24230 8a8ccc08a761ca10fdad1699d547ea37 805 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 375 389 4.5E-28 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 JV59_24230 8a8ccc08a761ca10fdad1699d547ea37 805 Pfam PF08453 Peptidase family M9 N-terminal 32 213 2.7E-41 T 14-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain JV59_24230 8a8ccc08a761ca10fdad1699d547ea37 805 Pfam PF01752 Collagenase 275 559 7.6E-100 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 JV59_36395 21e0185f1914c736950417892d935256 68 Pfam PF06568 Domain of unknown function (DUF1127) 23 57 1.5E-13 T 14-10-2018 IPR009506 Protein of unknown function DUF1127 JV59_17295 a63d8e23baba3c40d34682e7876c3e25 306 Hamap MF_01987 Ribokinase [rbsK]. 2 301 26.41 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 JV59_17295 a63d8e23baba3c40d34682e7876c3e25 306 SUPERFAMILY SSF53613 1 302 1.4E-85 T 14-10-2018 IPR029056 Ribokinase-like JV59_17295 a63d8e23baba3c40d34682e7876c3e25 306 PRINTS PR00990 Ribokinase signature 217 228 1.8E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 JV59_17295 a63d8e23baba3c40d34682e7876c3e25 306 PRINTS PR00990 Ribokinase signature 173 188 1.8E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 JV59_17295 a63d8e23baba3c40d34682e7876c3e25 306 PRINTS PR00990 Ribokinase signature 6 27 1.8E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 JV59_17295 a63d8e23baba3c40d34682e7876c3e25 306 PRINTS PR00990 Ribokinase signature 33 52 1.8E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 JV59_17295 a63d8e23baba3c40d34682e7876c3e25 306 PRINTS PR00990 Ribokinase signature 105 118 1.8E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 JV59_17295 a63d8e23baba3c40d34682e7876c3e25 306 Gene3D G3DSA:3.40.1190.20 1 306 4.0E-105 T 14-10-2018 IPR029056 Ribokinase-like JV59_17295 a63d8e23baba3c40d34682e7876c3e25 306 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 299 1.5E-111 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 JV59_17295 a63d8e23baba3c40d34682e7876c3e25 306 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 JV59_17295 a63d8e23baba3c40d34682e7876c3e25 306 Pfam PF00294 pfkB family carbohydrate kinase 1 294 2.9E-76 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB JV59_22865 cab9998957060e37f7448e8d48acd186 150 Pfam PF02814 UreE urease accessory protein, N-terminal domain 9 64 3.2E-11 T 14-10-2018 IPR004029 UreE urease accessory, N-terminal JV59_22865 cab9998957060e37f7448e8d48acd186 150 Gene3D G3DSA:2.60.260.20 1 70 1.0E-20 T 14-10-2018 JV59_22865 cab9998957060e37f7448e8d48acd186 150 SUPERFAMILY SSF69737 71 138 6.93E-23 T 14-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 JV59_22865 cab9998957060e37f7448e8d48acd186 150 Pfam PF05194 UreE urease accessory protein, C-terminal domain 72 150 6.7E-28 T 14-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 JV59_22865 cab9998957060e37f7448e8d48acd186 150 SMART SM00988 1 65 6.0E-16 T 14-10-2018 IPR004029 UreE urease accessory, N-terminal JV59_22865 cab9998957060e37f7448e8d48acd186 150 SUPERFAMILY SSF69287 1 71 3.66E-14 T 14-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily JV59_22865 cab9998957060e37f7448e8d48acd186 150 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 139 23.523 T 14-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 JV59_22865 cab9998957060e37f7448e8d48acd186 150 Gene3D G3DSA:3.30.70.790 72 143 7.4E-32 T 14-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 JV59_22865 cab9998957060e37f7448e8d48acd186 150 PIRSF PIRSF036402 2 150 8.4E-45 T 14-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 JV59_31905 7d0be3859906d0d2855b4062f48fb4f2 168 PIRSF PIRSF028301 2 168 5.2E-57 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 JV59_31905 7d0be3859906d0d2855b4062f48fb4f2 168 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 8 159 8.0E-57 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 JV59_31905 7d0be3859906d0d2855b4062f48fb4f2 168 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 160 9.7E-54 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 JV59_24690 4d22b253e542e9eeeb75c55eb98f7235 674 Gene3D G3DSA:3.40.50.300 1 398 5.2E-18 T 14-10-2018 JV59_24690 4d22b253e542e9eeeb75c55eb98f7235 674 SUPERFAMILY SSF52540 1 392 3.37E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_24690 4d22b253e542e9eeeb75c55eb98f7235 674 Pfam PF13175 AAA ATPase domain 1 380 9.3E-56 T 14-10-2018 JV59_00200 236b0b23098350c679d98d00ffa8d71f 141 Pfam PF05656 Protein of unknown function (DUF805) 8 138 1.1E-21 T 14-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 JV59_34975 ba365270a89a7b6f7c3aa16b8b95ba20 122 Pfam PF00072 Response regulator receiver domain 3 115 1.7E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_34975 ba365270a89a7b6f7c3aa16b8b95ba20 122 SMART SM00448 1 115 1.6E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_34975 ba365270a89a7b6f7c3aa16b8b95ba20 122 Gene3D G3DSA:3.40.50.2300 1 122 2.3E-40 T 14-10-2018 JV59_34975 ba365270a89a7b6f7c3aa16b8b95ba20 122 SUPERFAMILY SSF52172 1 120 1.42E-37 T 14-10-2018 IPR011006 CheY-like superfamily JV59_29510 cdcf4a941c559a2f19d61d2ae83f451a 142 SUPERFAMILY SSF58104 16 115 1.01E-6 T 14-10-2018 JV59_35315 1e2abebf1923bb1652b090c252d9709e 229 Gene3D G3DSA:3.30.70.20 44 219 1.3E-59 T 14-10-2018 JV59_35315 1e2abebf1923bb1652b090c252d9709e 229 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 132 143 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JV59_35315 1e2abebf1923bb1652b090c252d9709e 229 Gene3D G3DSA:3.30.70.20 105 158 1.3E-59 T 14-10-2018 JV59_35315 1e2abebf1923bb1652b090c252d9709e 229 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 228 5.1E-130 T 14-10-2018 IPR017567 Cytochrome c nitrite reductase, Fe-S protein JV59_35315 1e2abebf1923bb1652b090c252d9709e 229 SUPERFAMILY SSF54862 44 223 5.34E-64 T 14-10-2018 JV59_35315 1e2abebf1923bb1652b090c252d9709e 229 Pfam PF13247 4Fe-4S dicluster domain 91 188 4.5E-27 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JV59_35590 cb0db8b96a2d4e60b1ef872c82d39525 378 SUPERFAMILY SSF51338 1 53 3.6E-18 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JV59_35590 cb0db8b96a2d4e60b1ef872c82d39525 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 374 1.1E-157 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 JV59_35590 cb0db8b96a2d4e60b1ef872c82d39525 378 Pfam PF01979 Amidohydrolase family 51 374 3.2E-36 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JV59_35590 cb0db8b96a2d4e60b1ef872c82d39525 378 Gene3D G3DSA:2.30.40.10 6 373 2.2E-143 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JV59_35590 cb0db8b96a2d4e60b1ef872c82d39525 378 Gene3D G3DSA:3.20.20.140 55 341 2.2E-143 T 14-10-2018 JV59_35590 cb0db8b96a2d4e60b1ef872c82d39525 378 SUPERFAMILY SSF51556 54 347 4.7E-101 T 14-10-2018 IPR032466 Metal-dependent hydrolase JV59_35590 cb0db8b96a2d4e60b1ef872c82d39525 378 PIRSF PIRSF038994 1 378 2.0E-122 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 JV59_24780 a99ea50f39702cf88fa3bed312e117d1 175 Pfam PF03358 NADPH-dependent FMN reductase 1 137 7.1E-28 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 JV59_24780 a99ea50f39702cf88fa3bed312e117d1 175 SUPERFAMILY SSF52218 1 173 2.72E-37 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_24780 a99ea50f39702cf88fa3bed312e117d1 175 Gene3D G3DSA:3.40.50.360 1 175 4.2E-35 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_33745 14c73cd6600ab079bb50ace28fb99819 560 SUPERFAMILY SSF116726 294 377 1.57E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JV59_33745 14c73cd6600ab079bb50ace28fb99819 560 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 560 57.536 T 14-10-2018 IPR023017 Transport protein YbjL, putative JV59_33745 14c73cd6600ab079bb50ace28fb99819 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 393 544 1.4E-37 T 14-10-2018 IPR006512 YidE/YbjL duplication JV59_33745 14c73cd6600ab079bb50ace28fb99819 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 172 1.7E-27 T 14-10-2018 IPR006512 YidE/YbjL duplication JV59_33745 14c73cd6600ab079bb50ace28fb99819 560 Pfam PF06826 Predicted Permease Membrane Region 17 185 1.7E-35 T 14-10-2018 IPR006512 YidE/YbjL duplication JV59_33745 14c73cd6600ab079bb50ace28fb99819 560 Pfam PF06826 Predicted Permease Membrane Region 389 557 3.3E-42 T 14-10-2018 IPR006512 YidE/YbjL duplication JV59_33745 14c73cd6600ab079bb50ace28fb99819 560 SUPERFAMILY SSF116726 230 285 1.44E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JV59_33745 14c73cd6600ab079bb50ace28fb99819 560 Gene3D G3DSA:3.30.70.1450 228 288 1.0E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JV59_33745 14c73cd6600ab079bb50ace28fb99819 560 Gene3D G3DSA:3.30.70.1450 302 376 1.3E-5 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JV59_33745 14c73cd6600ab079bb50ace28fb99819 560 Pfam PF02080 TrkA-C domain 230 281 4.4E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JV59_33745 14c73cd6600ab079bb50ace28fb99819 560 Pfam PF02080 TrkA-C domain 309 374 4.3E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JV59_31745 7d74de1578cd91f4f257c06ba9c8c101 350 Pfam PF00793 DAHP synthetase I family 42 338 8.4E-100 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 JV59_31745 7d74de1578cd91f4f257c06ba9c8c101 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 2.9E-160 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 JV59_31745 7d74de1578cd91f4f257c06ba9c8c101 350 SUPERFAMILY SSF51569 8 349 8.16E-131 T 14-10-2018 JV59_31745 7d74de1578cd91f4f257c06ba9c8c101 350 Gene3D G3DSA:3.20.20.70 1 350 8.9E-153 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_31745 7d74de1578cd91f4f257c06ba9c8c101 350 PIRSF PIRSF001361 2 350 1.6E-155 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 JV59_36465 49c421f9aec36763ffb8122d31953a76 267 Pfam PF00459 Inositol monophosphatase family 2 259 1.9E-70 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JV59_36465 49c421f9aec36763ffb8122d31953a76 267 SUPERFAMILY SSF56655 1 259 2.49E-82 T 14-10-2018 JV59_36465 49c421f9aec36763ffb8122d31953a76 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 9.9E-33 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 JV59_36465 49c421f9aec36763ffb8122d31953a76 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 9.9E-33 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 JV59_36465 49c421f9aec36763ffb8122d31953a76 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 9.9E-33 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 JV59_36465 49c421f9aec36763ffb8122d31953a76 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 9.9E-33 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 JV59_36465 49c421f9aec36763ffb8122d31953a76 267 Gene3D G3DSA:3.30.540.10 1 140 7.7E-52 T 14-10-2018 JV59_36465 49c421f9aec36763ffb8122d31953a76 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 JV59_36465 49c421f9aec36763ffb8122d31953a76 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 1.5E-58 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JV59_36465 49c421f9aec36763ffb8122d31953a76 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.5E-58 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JV59_36465 49c421f9aec36763ffb8122d31953a76 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.5E-58 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JV59_36465 49c421f9aec36763ffb8122d31953a76 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 1.5E-58 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JV59_36465 49c421f9aec36763ffb8122d31953a76 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 1.5E-58 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JV59_36465 49c421f9aec36763ffb8122d31953a76 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.5E-58 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JV59_36465 49c421f9aec36763ffb8122d31953a76 267 Gene3D G3DSA:3.40.190.80 142 267 3.1E-36 T 14-10-2018 JV59_36465 49c421f9aec36763ffb8122d31953a76 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site JV59_34000 cd17145717915a56711f0dd0bac0863b 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 462 4.6E-94 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain JV59_34000 cd17145717915a56711f0dd0bac0863b 543 Gene3D G3DSA:3.40.190.10 42 524 5.1E-192 T 14-10-2018 JV59_34000 cd17145717915a56711f0dd0bac0863b 543 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 109 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site JV59_34000 cd17145717915a56711f0dd0bac0863b 543 Gene3D G3DSA:3.90.76.10 72 195 5.1E-192 T 14-10-2018 JV59_34000 cd17145717915a56711f0dd0bac0863b 543 Gene3D G3DSA:3.10.105.10 297 512 5.1E-192 T 14-10-2018 JV59_34000 cd17145717915a56711f0dd0bac0863b 543 SUPERFAMILY SSF53850 36 531 4.03E-149 T 14-10-2018 JV59_34000 cd17145717915a56711f0dd0bac0863b 543 PIRSF PIRSF002741 1 543 3.4E-118 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 JV59_24470 38aa6b2f03b5efc36fe20a6d9d0930ee 375 Pfam PF01844 HNH endonuclease 216 258 1.9E-5 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 JV59_24470 38aa6b2f03b5efc36fe20a6d9d0930ee 375 SMART SM00507 203 256 4.0E-8 T 14-10-2018 IPR003615 HNH nuclease JV59_24470 38aa6b2f03b5efc36fe20a6d9d0930ee 375 Gene3D G3DSA:3.30.40.60 176 302 2.0E-5 T 14-10-2018 JV59_18035 2da07d773f41e6daa14de3944310e92a 374 Gene3D G3DSA:2.60.40.3120 1 112 8.5E-43 T 14-10-2018 JV59_18035 2da07d773f41e6daa14de3944310e92a 374 SUPERFAMILY SSF53187 106 372 5.29E-65 T 14-10-2018 JV59_18035 2da07d773f41e6daa14de3944310e92a 374 Pfam PF00246 Zinc carboxypeptidase 124 341 1.8E-26 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 JV59_18035 2da07d773f41e6daa14de3944310e92a 374 Gene3D G3DSA:3.40.630.10 113 374 8.8E-74 T 14-10-2018 JV59_18035 2da07d773f41e6daa14de3944310e92a 374 SMART SM00631 112 362 2.2E-4 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 JV59_18465 2d732c26ed90d3c41a96423f14f4d4a5 555 SUPERFAMILY SSF54862 456 555 4.63E-25 T 14-10-2018 JV59_18465 2d732c26ed90d3c41a96423f14f4d4a5 555 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 3.3E-5 T 14-10-2018 JV59_18465 2d732c26ed90d3c41a96423f14f4d4a5 555 Gene3D G3DSA:3.50.50.60 7 388 1.9E-185 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_18465 2d732c26ed90d3c41a96423f14f4d4a5 555 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 452 553 1.5E-46 T 14-10-2018 JV59_18465 2d732c26ed90d3c41a96423f14f4d4a5 555 Gene3D G3DSA:3.30.70.20 457 550 8.9E-35 T 14-10-2018 JV59_18465 2d732c26ed90d3c41a96423f14f4d4a5 555 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 180 195 4.7E-7 T 14-10-2018 JV59_18465 2d732c26ed90d3c41a96423f14f4d4a5 555 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 4.7E-7 T 14-10-2018 JV59_18465 2d732c26ed90d3c41a96423f14f4d4a5 555 Gene3D G3DSA:3.30.9.90 79 456 1.9E-185 T 14-10-2018 JV59_18465 2d732c26ed90d3c41a96423f14f4d4a5 555 SUPERFAMILY SSF54373 212 310 2.47E-33 T 14-10-2018 JV59_18465 2d732c26ed90d3c41a96423f14f4d4a5 555 SUPERFAMILY SSF51905 3 454 2.63E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_16200 4639766e4829b48dd62532fc4b47c03e 246 Pfam PF03741 Integral membrane protein TerC family 11 198 4.5E-43 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 JV59_38830 9bd32206a93748e08e8770a0034b8603 775 Gene3D G3DSA:3.30.420.140 325 451 1.2E-156 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 JV59_38830 9bd32206a93748e08e8770a0034b8603 775 SUPERFAMILY SSF53098 322 469 3.19E-51 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JV59_38830 9bd32206a93748e08e8770a0034b8603 775 SUPERFAMILY SSF47781 470 557 8.89E-27 T 14-10-2018 IPR010994 RuvA domain 2-like JV59_38830 9bd32206a93748e08e8770a0034b8603 775 SMART SM00732 326 424 1.6E-38 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 JV59_38830 9bd32206a93748e08e8770a0034b8603 775 Pfam PF16921 Tex protein YqgF-like domain 327 451 3.7E-55 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain JV59_38830 9bd32206a93748e08e8770a0034b8603 775 Gene3D G3DSA:2.40.50.140 631 725 2.1E-28 T 14-10-2018 JV59_38830 9bd32206a93748e08e8770a0034b8603 775 SMART SM00316 649 720 3.4E-24 T 14-10-2018 IPR022967 RNA-binding domain, S1 JV59_38830 9bd32206a93748e08e8770a0034b8603 775 Gene3D G3DSA:1.10.3500.10 112 498 1.2E-156 T 14-10-2018 IPR023323 Tex-like domain superfamily JV59_38830 9bd32206a93748e08e8770a0034b8603 775 Pfam PF12836 Helix-hairpin-helix motif 491 555 5.2E-27 T 14-10-2018 JV59_38830 9bd32206a93748e08e8770a0034b8603 775 SUPERFAMILY SSF50249 638 723 2.16E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_38830 9bd32206a93748e08e8770a0034b8603 775 Pfam PF09371 Tex-like protein N-terminal domain 9 192 8.7E-71 T 14-10-2018 IPR018974 Tex-like protein, N-terminal JV59_38830 9bd32206a93748e08e8770a0034b8603 775 SUPERFAMILY SSF47781 560 632 3.11E-18 T 14-10-2018 IPR010994 RuvA domain 2-like JV59_38830 9bd32206a93748e08e8770a0034b8603 775 Gene3D G3DSA:1.10.10.650 1 109 1.7E-41 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily JV59_38830 9bd32206a93748e08e8770a0034b8603 775 Pfam PF00575 S1 RNA binding domain 649 720 1.1E-19 T 14-10-2018 IPR003029 S1 domain GO:0003676 JV59_38830 9bd32206a93748e08e8770a0034b8603 775 SUPERFAMILY SSF158832 3 321 1.31E-117 T 14-10-2018 JV59_38830 9bd32206a93748e08e8770a0034b8603 775 Gene3D G3DSA:1.10.150.310 499 630 3.8E-49 T 14-10-2018 JV59_36225 bea774664392f450c3220e7792a32baa 352 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 17 351 6.5E-142 T 14-10-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 JV59_36225 bea774664392f450c3220e7792a32baa 352 Gene3D G3DSA:2.70.98.10 12 351 2.8E-110 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 JV59_36225 bea774664392f450c3220e7792a32baa 352 PIRSF PIRSF005096 3 352 6.7E-113 T 14-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 JV59_36225 bea774664392f450c3220e7792a32baa 352 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 176 185 - T 14-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 JV59_36225 bea774664392f450c3220e7792a32baa 352 Pfam PF01263 Aldose 1-epimerase 22 348 3.9E-85 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 JV59_36225 bea774664392f450c3220e7792a32baa 352 SUPERFAMILY SSF74650 7 350 3.33E-107 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 JV59_17315 c9cfb0326840a70ece46bed5c0269fb2 322 Gene3D G3DSA:3.40.50.2300 68 297 1.6E-12 T 14-10-2018 JV59_17315 c9cfb0326840a70ece46bed5c0269fb2 322 Gene3D G3DSA:3.40.50.2300 135 318 1.6E-12 T 14-10-2018 JV59_19290 6840f7f8d5daab059fbda034f17e88b1 577 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 34 128 1.4E-20 T 14-10-2018 IPR029095 NarX-like, N-terminal JV59_19290 6840f7f8d5daab059fbda034f17e88b1 577 SMART SM00387 477 570 1.1E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_19290 6840f7f8d5daab059fbda034f17e88b1 577 SUPERFAMILY SSF55874 446 568 1.3E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_19290 6840f7f8d5daab059fbda034f17e88b1 577 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 479 566 5.1E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_19290 6840f7f8d5daab059fbda034f17e88b1 577 Gene3D G3DSA:3.30.565.10 437 573 7.6E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_19290 6840f7f8d5daab059fbda034f17e88b1 577 PIRSF PIRSF003167 2 576 4.8E-176 T 14-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 JV59_19290 6840f7f8d5daab059fbda034f17e88b1 577 Pfam PF00672 HAMP domain 177 223 2.9E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_19290 6840f7f8d5daab059fbda034f17e88b1 577 SMART SM00304 176 228 7.1E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_19290 6840f7f8d5daab059fbda034f17e88b1 577 Gene3D G3DSA:1.20.120.960 40 148 3.1E-10 T 14-10-2018 JV59_19290 6840f7f8d5daab059fbda034f17e88b1 577 SUPERFAMILY SSF158472 177 225 3.4E-8 T 14-10-2018 JV59_19290 6840f7f8d5daab059fbda034f17e88b1 577 Gene3D G3DSA:1.10.287.130 173 300 1.8E-7 T 14-10-2018 JV59_19290 6840f7f8d5daab059fbda034f17e88b1 577 Pfam PF07730 Histidine kinase 368 436 7.7E-16 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 JV59_37390 00bf6d676f2eb16cfe848a91533e9a59 859 Pfam PF11874 Domain of unknown function (DUF3394) 674 853 1.1E-71 T 14-10-2018 IPR021814 Protein of unknown function DUF3394 JV59_37390 00bf6d676f2eb16cfe848a91533e9a59 859 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 135 667 7.6E-78 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit JV59_37390 00bf6d676f2eb16cfe848a91533e9a59 859 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 32 725 7.4E-215 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ JV59_21940 9981d902339ed3c6cdbafb39ec5edc80 134 ProSitePatterns PS00934 Glyoxalase I signature 1. 7 28 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 JV59_21940 9981d902339ed3c6cdbafb39ec5edc80 134 Gene3D G3DSA:3.10.180.10 1 134 7.6E-35 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_21940 9981d902339ed3c6cdbafb39ec5edc80 134 SUPERFAMILY SSF54593 1 126 2.01E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_21940 9981d902339ed3c6cdbafb39ec5edc80 134 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 109 1.0E-9 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JV59_31710 9e7973b59b98b23257ef2d18e8c552ce 423 Pfam PF04403 Paraquat-inducible protein A 56 207 1.0E-36 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like JV59_31710 9e7973b59b98b23257ef2d18e8c552ce 423 Pfam PF04403 Paraquat-inducible protein A 251 406 1.5E-48 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like JV59_31710 9e7973b59b98b23257ef2d18e8c552ce 423 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 8 404 1.0E-106 T 14-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type JV59_31710 9e7973b59b98b23257ef2d18e8c552ce 423 SUPERFAMILY SSF48695 192 250 9.77E-5 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily JV59_14245 55086519b285c091138436180d74304f 438 Pfam PF05159 Capsule polysaccharide biosynthesis protein 210 365 1.0E-4 T 14-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 JV59_16300 9f1ec856d27108f9407e3292e53d5e01 253 Pfam PF00175 Oxidoreductase NAD-binding domain 117 228 6.6E-19 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 JV59_16300 9f1ec856d27108f9407e3292e53d5e01 253 Gene3D G3DSA:2.40.30.10 3 101 7.3E-24 T 14-10-2018 JV59_16300 9f1ec856d27108f9407e3292e53d5e01 253 Pfam PF00970 Oxidoreductase FAD-binding domain 21 95 9.4E-8 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 JV59_16300 9f1ec856d27108f9407e3292e53d5e01 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 34 46 2.2E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JV59_16300 9f1ec856d27108f9407e3292e53d5e01 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 141 150 2.2E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JV59_16300 9f1ec856d27108f9407e3292e53d5e01 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 116 135 2.2E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JV59_16300 9f1ec856d27108f9407e3292e53d5e01 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 214 222 2.2E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JV59_16300 9f1ec856d27108f9407e3292e53d5e01 253 SUPERFAMILY SSF63380 10 103 1.43E-19 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JV59_16300 9f1ec856d27108f9407e3292e53d5e01 253 SUPERFAMILY SSF52343 111 253 2.1E-34 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JV59_16300 9f1ec856d27108f9407e3292e53d5e01 253 Gene3D G3DSA:3.40.50.80 103 253 4.7E-39 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JV59_21420 05d33d44378880ac077085d600ad77d0 97 Gene3D G3DSA:3.30.70.100 1 96 1.5E-39 T 14-10-2018 JV59_21420 05d33d44378880ac077085d600ad77d0 97 SUPERFAMILY SSF54909 1 95 9.97E-29 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_21420 05d33d44378880ac077085d600ad77d0 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 4.5E-11 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain JV59_30935 2e92ca26911569ac7abaaceafe71dd2b 237 Pfam PF03591 AzlC protein 22 163 6.7E-31 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease JV59_39590 68ce0adffbf5d4d35c7bb41d44e01d04 516 Pfam PF02646 RmuC family 181 478 3.1E-107 T 14-10-2018 IPR003798 DNA recombination RmuC JV59_35515 10b776f2ef1d9a4eb3ea9c5fed77765c 130 PIRSF PIRSF000178 2 130 8.4E-32 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_35515 10b776f2ef1d9a4eb3ea9c5fed77765c 130 Gene3D G3DSA:1.20.1300.10 5 130 1.2E-43 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_35515 10b776f2ef1d9a4eb3ea9c5fed77765c 130 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 11 35 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_35515 10b776f2ef1d9a4eb3ea9c5fed77765c 130 SUPERFAMILY SSF81343 8 130 9.32E-35 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_35515 10b776f2ef1d9a4eb3ea9c5fed77765c 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 124 2.3E-29 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_35515 10b776f2ef1d9a4eb3ea9c5fed77765c 130 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 9 127 1.5E-39 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_35515 10b776f2ef1d9a4eb3ea9c5fed77765c 130 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 86 99 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_34885 b6428e6155878a525b8688ab139e9f85 445 SUPERFAMILY SSF56935 29 445 8.24E-83 T 14-10-2018 JV59_34885 b6428e6155878a525b8688ab139e9f85 445 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 21 445 8.6E-112 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) JV59_34885 b6428e6155878a525b8688ab139e9f85 445 Gene3D G3DSA:2.40.160.60 29 445 5.8E-113 T 14-10-2018 JV59_37470 a413ee38b45096256105e579505bb339 185 Gene3D G3DSA:3.40.50.1000 1 185 7.4E-59 T 14-10-2018 IPR023214 HAD superfamily JV59_37470 a413ee38b45096256105e579505bb339 185 SUPERFAMILY SSF56784 21 178 8.67E-41 T 14-10-2018 IPR036412 HAD-like superfamily JV59_37470 a413ee38b45096256105e579505bb339 185 Pfam PF08282 haloacid dehalogenase-like hydrolase 92 155 1.8E-9 T 14-10-2018 JV59_37470 a413ee38b45096256105e579505bb339 185 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 23 175 5.5E-62 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 JV59_37470 a413ee38b45096256105e579505bb339 185 PIRSF PIRSF006118 10 185 1.4E-74 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 JV59_37470 a413ee38b45096256105e579505bb339 185 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 24 137 2.7E-13 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 JV59_35015 ed52fceed5e077faf9c6f68d7d502cc5 577 SUPERFAMILY SSF47323 455 577 2.16E-36 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_35015 ed52fceed5e077faf9c6f68d7d502cc5 577 SUPERFAMILY SSF55190 2 96 4.32E-22 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 JV59_35015 ed52fceed5e077faf9c6f68d7d502cc5 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 2.8E-20 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JV59_35015 ed52fceed5e077faf9c6f68d7d502cc5 577 Gene3D G3DSA:3.40.50.620 108 454 5.5E-108 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_35015 ed52fceed5e077faf9c6f68d7d502cc5 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 28.256 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 JV59_35015 ed52fceed5e077faf9c6f68d7d502cc5 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 3.6E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 JV59_35015 ed52fceed5e077faf9c6f68d7d502cc5 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.6E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 JV59_35015 ed52fceed5e077faf9c6f68d7d502cc5 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.6E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 JV59_35015 ed52fceed5e077faf9c6f68d7d502cc5 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.6E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 JV59_35015 ed52fceed5e077faf9c6f68d7d502cc5 577 SMART SM01016 5 87 2.0E-28 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JV59_35015 ed52fceed5e077faf9c6f68d7d502cc5 577 Pfam PF05746 DALR anticodon binding domain 461 577 7.0E-37 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 JV59_35015 ed52fceed5e077faf9c6f68d7d502cc5 577 SMART SM00836 461 577 7.0E-42 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 JV59_35015 ed52fceed5e077faf9c6f68d7d502cc5 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 9.6E-203 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 JV59_35015 ed52fceed5e077faf9c6f68d7d502cc5 577 Gene3D G3DSA:3.30.1360.70 1 106 1.1E-33 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 JV59_35015 ed52fceed5e077faf9c6f68d7d502cc5 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_35015 ed52fceed5e077faf9c6f68d7d502cc5 577 Gene3D G3DSA:1.10.730.10 455 577 2.1E-36 T 14-10-2018 JV59_35015 ed52fceed5e077faf9c6f68d7d502cc5 577 Pfam PF00750 tRNA synthetases class I (R) 98 447 4.5E-164 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 JV59_35015 ed52fceed5e077faf9c6f68d7d502cc5 577 SUPERFAMILY SSF52374 110 454 1.32E-95 T 14-10-2018 JV59_38170 21a5e6908c529d6a6f9c72f1f94f8816 149 Gene3D G3DSA:3.40.50.9100 1 149 3.2E-66 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JV59_38170 21a5e6908c529d6a6f9c72f1f94f8816 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 74.765 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JV59_38170 21a5e6908c529d6a6f9c72f1f94f8816 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 149 4.0E-63 T 14-10-2018 JV59_38170 21a5e6908c529d6a6f9c72f1f94f8816 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 1.2E-65 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JV59_38170 21a5e6908c529d6a6f9c72f1f94f8816 149 SUPERFAMILY SSF52304 4 146 1.31E-62 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JV59_38170 21a5e6908c529d6a6f9c72f1f94f8816 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JV59_38170 21a5e6908c529d6a6f9c72f1f94f8816 149 Pfam PF01220 Dehydroquinase class II 6 142 7.0E-62 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JV59_38170 21a5e6908c529d6a6f9c72f1f94f8816 149 PIRSF PIRSF001399 3 149 1.2E-59 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JV59_35740 edd09c9c2f295553ea293ffd7a8b01d1 294 SUPERFAMILY SSF111331 8 290 3.14E-91 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily JV59_35740 edd09c9c2f295553ea293ffd7a8b01d1 294 Pfam PF01513 ATP-NAD kinase 8 273 1.7E-70 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 JV59_35740 edd09c9c2f295553ea293ffd7a8b01d1 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 33.643 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 JV59_35740 edd09c9c2f295553ea293ffd7a8b01d1 294 Gene3D G3DSA:2.60.200.30 129 266 5.8E-92 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 JV59_35740 edd09c9c2f295553ea293ffd7a8b01d1 294 Gene3D G3DSA:3.40.50.10330 23 289 5.8E-92 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 JV59_28220 a58e884d940b5f0026b2e76a0eeaea12 553 Gene3D G3DSA:3.30.70.100 449 541 3.3E-27 T 14-10-2018 JV59_28220 a58e884d940b5f0026b2e76a0eeaea12 553 SUPERFAMILY SSF82689 451 547 3.4E-32 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 JV59_28220 a58e884d940b5f0026b2e76a0eeaea12 553 SUPERFAMILY SSF82861 295 381 6.02E-14 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 JV59_28220 a58e884d940b5f0026b2e76a0eeaea12 553 SUPERFAMILY SSF50182 382 448 1.57E-17 T 14-10-2018 IPR010920 LSM domain superfamily JV59_28220 a58e884d940b5f0026b2e76a0eeaea12 553 Gene3D G3DSA:2.30.30.60 398 446 6.7E-18 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily JV59_28220 a58e884d940b5f0026b2e76a0eeaea12 553 Pfam PF00924 Mechanosensitive ion channel 345 537 4.3E-54 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 JV59_40045 97c82de669e6af5d4941447405b7e135 408 Gene3D G3DSA:1.10.3210.10 203 363 6.3E-23 T 14-10-2018 JV59_40045 97c82de669e6af5d4941447405b7e135 408 Pfam PF08668 HDOD domain 208 328 6.9E-14 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD JV59_40045 97c82de669e6af5d4941447405b7e135 408 SMART SM00052 2 199 0.0061 T 14-10-2018 IPR001633 EAL domain JV59_40045 97c82de669e6af5d4941447405b7e135 408 Pfam PF00563 EAL domain 80 194 9.9E-12 T 14-10-2018 IPR001633 EAL domain JV59_40045 97c82de669e6af5d4941447405b7e135 408 SUPERFAMILY SSF141868 4 199 3.92E-27 T 14-10-2018 IPR035919 EAL domain superfamily JV59_40045 97c82de669e6af5d4941447405b7e135 408 PIRSF PIRSF003180 1 408 5.6E-167 T 14-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing JV59_40045 97c82de669e6af5d4941447405b7e135 408 SUPERFAMILY SSF109604 185 404 1.07E-39 T 14-10-2018 JV59_40045 97c82de669e6af5d4941447405b7e135 408 Gene3D G3DSA:3.20.20.450 1 202 1.1E-15 T 14-10-2018 IPR035919 EAL domain superfamily JV59_20010 b789ed1f72b4b1a36e5c71e0e698ee3e 312 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 19 307 5.0E-144 T 14-10-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 JV59_20010 b789ed1f72b4b1a36e5c71e0e698ee3e 312 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 27 279 1.6E-59 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 JV59_20010 b789ed1f72b4b1a36e5c71e0e698ee3e 312 Gene3D G3DSA:3.40.190.100 109 218 4.8E-96 T 14-10-2018 JV59_20010 b789ed1f72b4b1a36e5c71e0e698ee3e 312 Gene3D G3DSA:3.40.190.10 28 289 4.8E-96 T 14-10-2018 JV59_20010 b789ed1f72b4b1a36e5c71e0e698ee3e 312 SUPERFAMILY SSF53850 20 295 2.71E-88 T 14-10-2018 JV59_20415 fc1118a88deed28e3034eb00ea7e76d2 204 PIRSF PIRSF006324 1 204 2.4E-48 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_20415 fc1118a88deed28e3034eb00ea7e76d2 204 Pfam PF01810 LysE type translocator 15 202 1.9E-24 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_36700 4809932afdbcb4c52149cc255d381a04 273 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 262 1.8E-92 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 JV59_36700 4809932afdbcb4c52149cc255d381a04 273 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 2.9E-84 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 JV59_36700 4809932afdbcb4c52149cc255d381a04 273 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.263 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 JV59_36700 4809932afdbcb4c52149cc255d381a04 273 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 JV59_36275 98bfae0a8b84140a15bbba9717d4fc29 112 ProDom PD031420 YFEK EXPORTED PRECURSOR SIGNAL PERIPLASMIC ECS3291 XCC0326 20 90 5.0E-10 T 14-10-2018 IPR035242 Protein of unknown function DUF5329 JV59_36275 98bfae0a8b84140a15bbba9717d4fc29 112 Pfam PF17263 Family of unknown function (DUF5329) 20 109 2.1E-30 T 14-10-2018 IPR035242 Protein of unknown function DUF5329 JV59_19870 32061b50523e7ed4300c9877b8f10f7c 303 SUPERFAMILY SSF53807 17 281 9.42E-54 T 14-10-2018 JV59_19870 32061b50523e7ed4300c9877b8f10f7c 303 Gene3D G3DSA:3.40.50.1980 24 280 3.5E-88 T 14-10-2018 JV59_19870 32061b50523e7ed4300c9877b8f10f7c 303 Pfam PF01497 Periplasmic binding protein 40 275 5.6E-24 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain JV59_19870 32061b50523e7ed4300c9877b8f10f7c 303 Gene3D G3DSA:3.40.50.1980 170 274 3.5E-88 T 14-10-2018 JV59_28910 11a9887433362001770b5b76052c803f 135 Pfam PF00816 H-NS histone family 33 129 3.7E-17 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 JV59_28910 11a9887433362001770b5b76052c803f 135 SMART SM00528 88 135 7.5E-26 T 14-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 JV59_28910 11a9887433362001770b5b76052c803f 135 Gene3D G3DSA:4.10.430.10 92 135 1.4E-24 T 14-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 JV59_28910 11a9887433362001770b5b76052c803f 135 SUPERFAMILY SSF81273 2 58 1.37E-16 T 14-10-2018 JV59_28910 11a9887433362001770b5b76052c803f 135 Gene3D G3DSA:1.10.287.1050 1 82 1.7E-25 T 14-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 JV59_28910 11a9887433362001770b5b76052c803f 135 PIRSF PIRSF002096 1 135 2.0E-51 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 JV59_28910 11a9887433362001770b5b76052c803f 135 SUPERFAMILY SSF81273 93 135 4.32E-12 T 14-10-2018 JV59_22515 bf699f8a15dd8e52f31b1c00f7656943 183 Pfam PF13577 SnoaL-like domain 25 147 3.6E-16 T 14-10-2018 IPR037401 SnoaL-like domain JV59_22515 bf699f8a15dd8e52f31b1c00f7656943 183 Gene3D G3DSA:3.10.450.50 18 168 1.5E-27 T 14-10-2018 JV59_22515 bf699f8a15dd8e52f31b1c00f7656943 183 SUPERFAMILY SSF54427 24 157 1.35E-22 T 14-10-2018 IPR032710 NTF2-like domain superfamily JV59_37040 99c33ec2c65c1839921a3464b60fb7d6 409 Gene3D G3DSA:3.40.50.720 14 312 7.6E-111 T 14-10-2018 JV59_37040 99c33ec2c65c1839921a3464b60fb7d6 409 SUPERFAMILY SSF51735 108 295 5.09E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_37040 99c33ec2c65c1839921a3464b60fb7d6 409 SUPERFAMILY SSF55021 334 408 3.32E-18 T 14-10-2018 JV59_37040 99c33ec2c65c1839921a3464b60fb7d6 409 Gene3D G3DSA:3.30.70.260 328 408 2.0E-32 T 14-10-2018 JV59_37040 99c33ec2c65c1839921a3464b60fb7d6 409 Gene3D G3DSA:3.40.50.720 109 297 7.6E-111 T 14-10-2018 JV59_37040 99c33ec2c65c1839921a3464b60fb7d6 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JV59_37040 99c33ec2c65c1839921a3464b60fb7d6 409 Pfam PF01842 ACT domain 346 400 1.9E-6 T 14-10-2018 IPR002912 ACT domain JV59_37040 99c33ec2c65c1839921a3464b60fb7d6 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 3.6E-38 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 JV59_37040 99c33ec2c65c1839921a3464b60fb7d6 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JV59_37040 99c33ec2c65c1839921a3464b60fb7d6 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 1.6E-52 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 JV59_37040 99c33ec2c65c1839921a3464b60fb7d6 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 JV59_37040 99c33ec2c65c1839921a3464b60fb7d6 409 SUPERFAMILY SSF52283 7 136 3.61E-49 T 14-10-2018 JV59_02040 fd5c606ccdd7fb0bec0c3814b1251687 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 9.3E-6 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JV59_02040 fd5c606ccdd7fb0bec0c3814b1251687 360 Pfam PF00953 Glycosyl transferase family 4 99 283 4.9E-37 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 JV59_02040 fd5c606ccdd7fb0bec0c3814b1251687 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 2.9E-156 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JV59_02040 fd5c606ccdd7fb0bec0c3814b1251687 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JV59_02040 fd5c606ccdd7fb0bec0c3814b1251687 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JV59_02040 fd5c606ccdd7fb0bec0c3814b1251687 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.376 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JV59_22345 106f8b680c435a7db176cf8d550fcebd 331 SMART SM00342 245 327 2.6E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_22345 106f8b680c435a7db176cf8d550fcebd 331 SUPERFAMILY SSF46689 280 330 5.38E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_22345 106f8b680c435a7db176cf8d550fcebd 331 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 201 1.0E-21 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal JV59_22345 106f8b680c435a7db176cf8d550fcebd 331 Gene3D G3DSA:1.10.10.60 225 331 9.7E-20 T 14-10-2018 JV59_22345 106f8b680c435a7db176cf8d550fcebd 331 Pfam PF12833 Helix-turn-helix domain 251 328 3.3E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_35830 e2d57f1f4711976e566ad5ed37a3a03d 115 Gene3D G3DSA:3.30.70.80 42 115 4.3E-5 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 JV59_27590 9181dc2cd286e34eb401171b33b6e535 219 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 209 2.4E-99 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 JV59_27590 9181dc2cd286e34eb401171b33b6e535 219 Gene3D G3DSA:3.30.420.10 9 215 2.2E-53 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JV59_27590 9181dc2cd286e34eb401171b33b6e535 219 Pfam PF00929 Exonuclease 20 195 3.3E-41 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III JV59_27590 9181dc2cd286e34eb401171b33b6e535 219 Hamap MF_00157 Ribonuclease T [rnt]. 1 219 114.913 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 JV59_27590 9181dc2cd286e34eb401171b33b6e535 219 SMART SM00479 18 204 5.4E-29 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III JV59_27590 9181dc2cd286e34eb401171b33b6e535 219 SUPERFAMILY SSF53098 10 208 7.59E-55 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JV59_39900 2ca9a08fd2e83e48f1f911770c05f5a6 108 Gene3D G3DSA:3.40.30.10 1 108 3.6E-35 T 14-10-2018 JV59_39900 2ca9a08fd2e83e48f1f911770c05f5a6 108 Pfam PF00085 Thioredoxin 5 106 7.1E-33 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 JV59_39900 2ca9a08fd2e83e48f1f911770c05f5a6 108 PIRSF PIRSF000077 2 108 1.5E-42 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 JV59_39900 2ca9a08fd2e83e48f1f911770c05f5a6 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 JV59_39900 2ca9a08fd2e83e48f1f911770c05f5a6 108 SUPERFAMILY SSF52833 3 107 1.28E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_39900 2ca9a08fd2e83e48f1f911770c05f5a6 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 14-10-2018 JV59_39900 2ca9a08fd2e83e48f1f911770c05f5a6 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 14-10-2018 JV59_39900 2ca9a08fd2e83e48f1f911770c05f5a6 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 14-10-2018 JV59_39900 2ca9a08fd2e83e48f1f911770c05f5a6 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 4.6E-37 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 JV59_30010 e4bb99ecddf0ffd0504dd2386a1788ba 252 SUPERFAMILY SSF53850 25 236 4.55E-22 T 14-10-2018 JV59_30010 e4bb99ecddf0ffd0504dd2386a1788ba 252 Gene3D G3DSA:3.40.190.10 37 235 5.6E-11 T 14-10-2018 JV59_30010 e4bb99ecddf0ffd0504dd2386a1788ba 252 Gene3D G3DSA:3.40.190.10 104 201 5.6E-11 T 14-10-2018 JV59_30010 e4bb99ecddf0ffd0504dd2386a1788ba 252 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 236 1.7E-8 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_01325 3d63ef0fbec399cc3dde0f8d9ed96717 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 257 4.4E-74 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 JV59_01325 3d63ef0fbec399cc3dde0f8d9ed96717 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.683 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 JV59_01325 3d63ef0fbec399cc3dde0f8d9ed96717 267 Pfam PF02673 Bacitracin resistance protein BacA 6 258 1.5E-83 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 JV59_18170 1f50510b72c7a97181285cfc31b2230a 239 Gene3D G3DSA:3.30.420.10 41 232 9.1E-35 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JV59_18170 1f50510b72c7a97181285cfc31b2230a 239 SMART SM00479 48 229 5.1E-18 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III JV59_18170 1f50510b72c7a97181285cfc31b2230a 239 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 44 228 3.4E-22 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_18170 1f50510b72c7a97181285cfc31b2230a 239 Pfam PF00929 Exonuclease 51 220 6.9E-16 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III JV59_18170 1f50510b72c7a97181285cfc31b2230a 239 SUPERFAMILY SSF53098 40 229 1.41E-37 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JV59_24705 604d92c2642c4db7f8c203e0602d6447 277 PIRSF PIRSF006232 1 275 2.3E-54 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 JV59_24705 604d92c2642c4db7f8c203e0602d6447 277 Pfam PF05726 Pirin C-terminal cupin domain 168 262 3.1E-11 T 14-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 JV59_24705 604d92c2642c4db7f8c203e0602d6447 277 Gene3D G3DSA:2.60.120.10 137 240 5.1E-55 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_24705 604d92c2642c4db7f8c203e0602d6447 277 Gene3D G3DSA:2.60.120.10 17 257 5.1E-55 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_24705 604d92c2642c4db7f8c203e0602d6447 277 Pfam PF02678 Pirin 22 114 7.8E-22 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 JV59_24705 604d92c2642c4db7f8c203e0602d6447 277 SUPERFAMILY SSF51182 6 268 1.6E-54 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JV59_25655 1d5883ccba430b18ce34f9cb69f56560 531 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 14-10-2018 IPR018093 BCCT transporter, conserved site JV59_25655 1d5883ccba430b18ce34f9cb69f56560 531 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 75 519 3.0E-132 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 JV59_25655 1d5883ccba430b18ce34f9cb69f56560 531 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 518 8.2E-166 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 JV59_00770 d679a18ce81bbe7115a9325bfd2d83d1 272 Pfam PF00795 Carbon-nitrogen hydrolase 3 255 8.8E-51 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 JV59_00770 d679a18ce81bbe7115a9325bfd2d83d1 272 Gene3D G3DSA:3.60.110.10 1 269 3.3E-90 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JV59_00770 d679a18ce81bbe7115a9325bfd2d83d1 272 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 14-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site JV59_00770 d679a18ce81bbe7115a9325bfd2d83d1 272 SUPERFAMILY SSF56317 3 263 9.42E-80 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JV59_25750 1bac55736e0d512ee1bcb511e6861b81 433 Gene3D G3DSA:1.10.3210.10 182 375 6.5E-34 T 14-10-2018 JV59_25750 1bac55736e0d512ee1bcb511e6861b81 433 Gene3D G3DSA:3.40.50.2300 12 157 1.0E-30 T 14-10-2018 JV59_25750 1bac55736e0d512ee1bcb511e6861b81 433 Pfam PF13487 HD domain 273 319 5.7E-12 T 14-10-2018 JV59_25750 1bac55736e0d512ee1bcb511e6861b81 433 Pfam PF00072 Response regulator receiver domain 16 121 9.5E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_25750 1bac55736e0d512ee1bcb511e6861b81 433 SUPERFAMILY SSF109604 203 367 5.02E-14 T 14-10-2018 JV59_25750 1bac55736e0d512ee1bcb511e6861b81 433 SMART SM00448 13 124 1.3E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_25750 1bac55736e0d512ee1bcb511e6861b81 433 SUPERFAMILY SSF52172 12 193 2.28E-33 T 14-10-2018 IPR011006 CheY-like superfamily JV59_26880 34d757e186348a0910318750db7f0ba4 243 Pfam PF00696 Amino acid kinase family 11 219 4.4E-27 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 JV59_26880 34d757e186348a0910318750db7f0ba4 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 43.993 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 JV59_26880 34d757e186348a0910318750db7f0ba4 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 3.8E-102 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 JV59_26880 34d757e186348a0910318750db7f0ba4 243 PIRSF PIRSF005650 4 243 7.9E-89 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 JV59_26880 34d757e186348a0910318750db7f0ba4 243 Gene3D G3DSA:3.40.1160.10 3 242 7.5E-76 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JV59_26880 34d757e186348a0910318750db7f0ba4 243 SUPERFAMILY SSF53633 7 240 1.07E-71 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JV59_39490 7422f7d66dbc4a6a43c688d19b1ad31b 596 Gene3D G3DSA:3.40.350.10 2 146 7.0E-35 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JV59_39490 7422f7d66dbc4a6a43c688d19b1ad31b 596 Pfam PF16188 C-terminal region of peptidase_M24 534 593 2.0E-22 T 14-10-2018 IPR032416 Peptidase M24, C-terminal domain JV59_39490 7422f7d66dbc4a6a43c688d19b1ad31b 596 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 131 5.9E-19 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 JV59_39490 7422f7d66dbc4a6a43c688d19b1ad31b 596 SUPERFAMILY SSF53092 6 146 3.49E-19 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JV59_39490 7422f7d66dbc4a6a43c688d19b1ad31b 596 SUPERFAMILY SSF55920 303 559 7.59E-56 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like JV59_39490 7422f7d66dbc4a6a43c688d19b1ad31b 596 Pfam PF00557 Metallopeptidase family M24 309 524 1.5E-42 T 14-10-2018 IPR000994 Peptidase M24 JV59_39490 7422f7d66dbc4a6a43c688d19b1ad31b 596 Gene3D G3DSA:3.90.230.10 300 593 3.2E-95 T 14-10-2018 JV59_39490 7422f7d66dbc4a6a43c688d19b1ad31b 596 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 1.3E-33 T 14-10-2018 JV59_39490 7422f7d66dbc4a6a43c688d19b1ad31b 596 Gene3D G3DSA:3.40.350.10 147 292 8.9E-23 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JV59_26170 1d90b5c93e237870c38bffd8354b647b 298 Pfam PF10987 Protein of unknown function (DUF2806) 58 276 8.7E-85 T 14-10-2018 IPR021254 Protein of unknown function DUF2806 JV59_26170 1d90b5c93e237870c38bffd8354b647b 298 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 37 285 1.2E-105 T 14-10-2018 IPR021254 Protein of unknown function DUF2806 JV59_34685 750f9300660a8acd7d3be3da1ca8556d 389 SUPERFAMILY SSF48452 109 276 1.82E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_34685 750f9300660a8acd7d3be3da1ca8556d 389 SMART SM00028 141 174 310.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_34685 750f9300660a8acd7d3be3da1ca8556d 389 SMART SM00028 69 102 81.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_34685 750f9300660a8acd7d3be3da1ca8556d 389 SMART SM00028 180 213 0.096 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_34685 750f9300660a8acd7d3be3da1ca8556d 389 SMART SM00028 214 247 23.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_34685 750f9300660a8acd7d3be3da1ca8556d 389 Gene3D G3DSA:1.25.40.10 17 106 1.3E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_34685 750f9300660a8acd7d3be3da1ca8556d 389 SUPERFAMILY SSF48452 30 97 3.45E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_34685 750f9300660a8acd7d3be3da1ca8556d 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 37.251 T 14-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 JV59_34685 750f9300660a8acd7d3be3da1ca8556d 389 Gene3D G3DSA:1.25.40.10 107 280 3.2E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_34685 750f9300660a8acd7d3be3da1ca8556d 389 Pfam PF13176 Tetratricopeptide repeat 71 94 0.026 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_25170 ae00748fa8cdd9c88465ca1580e9699a 238 Pfam PF06586 TraK protein 16 228 2.2E-23 T 14-10-2018 IPR010563 Pilus assembly TraK JV59_24740 8a3ea63f523302ad2f3b3abfdd2d3f55 222 SUPERFAMILY SSF51735 7 220 1.47E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_24740 8a3ea63f523302ad2f3b3abfdd2d3f55 222 Gene3D G3DSA:3.40.50.720 1 222 4.5E-58 T 14-10-2018 JV59_24740 8a3ea63f523302ad2f3b3abfdd2d3f55 222 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 39 218 5.8E-32 T 14-10-2018 JV59_24740 8a3ea63f523302ad2f3b3abfdd2d3f55 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 57 68 4.0E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_24740 8a3ea63f523302ad2f3b3abfdd2d3f55 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 205 4.0E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_24740 8a3ea63f523302ad2f3b3abfdd2d3f55 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.0E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_24740 8a3ea63f523302ad2f3b3abfdd2d3f55 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 165 4.0E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_24740 8a3ea63f523302ad2f3b3abfdd2d3f55 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 148 4.0E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_33255 23ba60ee79d4e238e7b2cc540375ce80 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 JV59_33255 23ba60ee79d4e238e7b2cc540375ce80 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.498 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 JV59_33255 23ba60ee79d4e238e7b2cc540375ce80 268 Gene3D G3DSA:3.20.20.70 1 268 3.8E-98 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_33255 23ba60ee79d4e238e7b2cc540375ce80 268 SUPERFAMILY SSF51366 1 266 6.03E-93 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 JV59_33255 23ba60ee79d4e238e7b2cc540375ce80 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 2.7E-106 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 JV59_33255 23ba60ee79d4e238e7b2cc540375ce80 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 3.0E-101 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 JV59_00705 e3da56bd02ef288887ada5bfaa8e94d8 191 SUPERFAMILY SSF54523 8 114 7.85E-13 T 14-10-2018 JV59_00705 e3da56bd02ef288887ada5bfaa8e94d8 191 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 28 3.4E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_00705 e3da56bd02ef288887ada5bfaa8e94d8 191 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 8.2E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_00705 e3da56bd02ef288887ada5bfaa8e94d8 191 Gene3D G3DSA:3.30.700.10 8 191 2.3E-9 T 14-10-2018 JV59_27890 a63bf2e831527bf8d5c8f39778636cd9 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 1.6E-34 T 14-10-2018 IPR001453 MoaB/Mog domain JV59_27890 a63bf2e831527bf8d5c8f39778636cd9 170 SMART SM00852 14 158 2.6E-27 T 14-10-2018 IPR001453 MoaB/Mog domain JV59_27890 a63bf2e831527bf8d5c8f39778636cd9 170 Gene3D G3DSA:3.40.980.10 2 170 6.4E-52 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily JV59_27890 a63bf2e831527bf8d5c8f39778636cd9 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 JV59_27890 a63bf2e831527bf8d5c8f39778636cd9 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 168 3.4E-85 T 14-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 JV59_27890 a63bf2e831527bf8d5c8f39778636cd9 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 1.4E-37 T 14-10-2018 IPR001453 MoaB/Mog domain JV59_27890 a63bf2e831527bf8d5c8f39778636cd9 170 PIRSF PIRSF006443 1 166 5.8E-67 T 14-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 JV59_27890 a63bf2e831527bf8d5c8f39778636cd9 170 SUPERFAMILY SSF53218 7 168 4.97E-47 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily JV59_03115 64cdc57e29db0904831acdb18ed44e0a 624 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 578 622 4.4E-9 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JV59_03115 64cdc57e29db0904831acdb18ed44e0a 624 SUPERFAMILY SSF64518 171 445 2.35E-10 T 14-10-2018 JV59_03115 64cdc57e29db0904831acdb18ed44e0a 624 SUPERFAMILY SSF64518 430 622 2.88E-16 T 14-10-2018 JV59_03115 64cdc57e29db0904831acdb18ed44e0a 624 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 336 2.1E-59 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 JV59_03115 64cdc57e29db0904831acdb18ed44e0a 624 Pfam PF00460 Flagella basal body rod protein 16 35 2.0E-4 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 JV59_03115 64cdc57e29db0904831acdb18ed44e0a 624 PRINTS PR01005 Flagellar hook-associated protein signature 125 145 9.7E-12 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 JV59_03115 64cdc57e29db0904831acdb18ed44e0a 624 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 9.7E-12 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 JV59_03115 64cdc57e29db0904831acdb18ed44e0a 624 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 9.7E-12 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 JV59_03115 64cdc57e29db0904831acdb18ed44e0a 624 PRINTS PR01005 Flagellar hook-associated protein signature 406 423 9.7E-12 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 JV59_03115 64cdc57e29db0904831acdb18ed44e0a 624 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 9.7E-12 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 JV59_03115 64cdc57e29db0904831acdb18ed44e0a 624 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 9.7E-12 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 JV59_33175 e01466a3b8081155970cc8ba05cdbfc7 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 1.6E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JV59_33175 e01466a3b8081155970cc8ba05cdbfc7 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 1.6E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JV59_33175 e01466a3b8081155970cc8ba05cdbfc7 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 1.6E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JV59_33175 e01466a3b8081155970cc8ba05cdbfc7 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 1.6E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JV59_33175 e01466a3b8081155970cc8ba05cdbfc7 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 1.6E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JV59_33175 e01466a3b8081155970cc8ba05cdbfc7 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 1.6E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JV59_33175 e01466a3b8081155970cc8ba05cdbfc7 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.6E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JV59_33175 e01466a3b8081155970cc8ba05cdbfc7 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 1.6E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JV59_33175 e01466a3b8081155970cc8ba05cdbfc7 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 1.6E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JV59_33175 e01466a3b8081155970cc8ba05cdbfc7 320 Gene3D G3DSA:3.50.50.60 9 311 1.9E-130 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_33175 e01466a3b8081155970cc8ba05cdbfc7 320 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 9.8E-49 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JV59_33175 e01466a3b8081155970cc8ba05cdbfc7 320 SUPERFAMILY SSF51905 2 313 6.57E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_33175 e01466a3b8081155970cc8ba05cdbfc7 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.1E-38 T 14-10-2018 JV59_33175 e01466a3b8081155970cc8ba05cdbfc7 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 1.1E-38 T 14-10-2018 JV59_33175 e01466a3b8081155970cc8ba05cdbfc7 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.1E-38 T 14-10-2018 JV59_33175 e01466a3b8081155970cc8ba05cdbfc7 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.1E-38 T 14-10-2018 JV59_33175 e01466a3b8081155970cc8ba05cdbfc7 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.1E-38 T 14-10-2018 JV59_33175 e01466a3b8081155970cc8ba05cdbfc7 320 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 JV59_33175 e01466a3b8081155970cc8ba05cdbfc7 320 Gene3D G3DSA:3.50.50.60 118 244 1.9E-130 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_33175 e01466a3b8081155970cc8ba05cdbfc7 320 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 2.9E-125 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 JV59_17735 19677ee56214369e635f649996cb993b 343 SMART SM00829 14 340 1.6E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JV59_17735 19677ee56214369e635f649996cb993b 343 SUPERFAMILY SSF51735 143 307 1.26E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_17735 19677ee56214369e635f649996cb993b 343 Gene3D G3DSA:3.90.180.10 22 330 7.1E-119 T 14-10-2018 JV59_17735 19677ee56214369e635f649996cb993b 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 136 2.8E-32 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JV59_17735 19677ee56214369e635f649996cb993b 343 SUPERFAMILY SSF50129 3 175 5.78E-53 T 14-10-2018 IPR011032 GroES-like superfamily JV59_17735 19677ee56214369e635f649996cb993b 343 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 3 342 60.613 T 14-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 JV59_17735 19677ee56214369e635f649996cb993b 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 JV59_17735 19677ee56214369e635f649996cb993b 343 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 5 342 1.2E-179 T 14-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 JV59_17735 19677ee56214369e635f649996cb993b 343 Pfam PF00107 Zinc-binding dehydrogenase 176 303 7.6E-28 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JV59_17735 19677ee56214369e635f649996cb993b 343 Gene3D G3DSA:3.40.50.720 155 288 7.1E-119 T 14-10-2018 JV59_20865 21ee4b1b6c3a5f35d7c5e8f6458dc70b 248 SMART SM00382 26 223 9.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_20865 21ee4b1b6c3a5f35d7c5e8f6458dc70b 248 Pfam PF00005 ABC transporter 17 172 3.6E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_20865 21ee4b1b6c3a5f35d7c5e8f6458dc70b 248 Gene3D G3DSA:3.40.50.300 1 247 3.1E-66 T 14-10-2018 JV59_20865 21ee4b1b6c3a5f35d7c5e8f6458dc70b 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 1.9E-114 T 14-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 JV59_20865 21ee4b1b6c3a5f35d7c5e8f6458dc70b 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_20865 21ee4b1b6c3a5f35d7c5e8f6458dc70b 248 SUPERFAMILY SSF52540 2 231 2.84E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_34335 9d1d7cdaa22dfc4f27b126cacc2ba639 288 Gene3D G3DSA:1.10.12.10 226 276 6.3E-31 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal JV59_34335 9d1d7cdaa22dfc4f27b126cacc2ba639 288 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 126 146 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 JV59_34335 9d1d7cdaa22dfc4f27b126cacc2ba639 288 SUPERFAMILY SSF52096 17 284 3.64E-79 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JV59_34335 9d1d7cdaa22dfc4f27b126cacc2ba639 288 Pfam PF00378 Enoyl-CoA hydratase/isomerase 34 282 3.7E-77 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JV59_34335 9d1d7cdaa22dfc4f27b126cacc2ba639 288 Gene3D G3DSA:3.90.226.10 3 225 2.2E-85 T 14-10-2018 JV59_34335 9d1d7cdaa22dfc4f27b126cacc2ba639 288 TIGRFAM TIGR01929 menB: naphthoate synthase 25 284 9.4E-146 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 JV59_34335 9d1d7cdaa22dfc4f27b126cacc2ba639 288 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 18 287 56.283 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 JV59_27540 19fdb240f66a90551828cc7c2084a418 114 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 114 3.9E-46 T 14-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 JV59_27540 19fdb240f66a90551828cc7c2084a418 114 Gene3D G3DSA:3.40.30.10 1 114 1.8E-47 T 14-10-2018 JV59_27540 19fdb240f66a90551828cc7c2084a418 114 SUPERFAMILY SSF52833 2 114 4.16E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_27540 19fdb240f66a90551828cc7c2084a418 114 Pfam PF03960 ArsC family 6 113 5.2E-18 T 14-10-2018 IPR006660 Arsenate reductase-like JV59_23525 725e90672d557200f2c448a6e885ffdb 314 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 145 166 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 JV59_23525 725e90672d557200f2c448a6e885ffdb 314 SUPERFAMILY SSF51735 117 235 1.03E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_23525 725e90672d557200f2c448a6e885ffdb 314 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 90 1.2E-10 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JV59_23525 725e90672d557200f2c448a6e885ffdb 314 Pfam PF13602 Zinc-binding dehydrogenase 187 306 1.1E-15 T 14-10-2018 JV59_23525 725e90672d557200f2c448a6e885ffdb 314 SUPERFAMILY SSF50129 1 149 6.39E-40 T 14-10-2018 IPR011032 GroES-like superfamily JV59_23525 725e90672d557200f2c448a6e885ffdb 314 Gene3D G3DSA:3.40.50.720 128 257 3.0E-87 T 14-10-2018 JV59_23525 725e90672d557200f2c448a6e885ffdb 314 Gene3D G3DSA:3.90.180.10 8 305 3.0E-87 T 14-10-2018 JV59_23525 725e90672d557200f2c448a6e885ffdb 314 SMART SM00829 10 306 1.7E-30 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JV59_16800 f0c0b1bc32c23d562f50a16438dc089e 596 Pfam PF02225 PA domain 145 246 5.9E-15 T 14-10-2018 IPR003137 PA domain JV59_16800 f0c0b1bc32c23d562f50a16438dc089e 596 Pfam PF04389 Peptidase family M28 273 532 4.6E-35 T 14-10-2018 IPR007484 Peptidase M28 JV59_16800 f0c0b1bc32c23d562f50a16438dc089e 596 SUPERFAMILY SSF52025 77 223 3.66E-16 T 14-10-2018 JV59_16800 f0c0b1bc32c23d562f50a16438dc089e 596 SUPERFAMILY SSF53187 38 541 3.43E-54 T 14-10-2018 JV59_24390 3372a0721cf3cc226ff78c96e9573d98 119 SUPERFAMILY SSF52309 2 87 5.8E-7 T 14-10-2018 JV59_24390 3372a0721cf3cc226ff78c96e9573d98 119 Gene3D G3DSA:3.40.50.450 1 114 9.1E-7 T 14-10-2018 JV59_01080 e8ed6eb7426ae55c213523e498561ec3 160 Gene3D G3DSA:3.90.960.10 3 160 1.2E-29 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 JV59_01080 e8ed6eb7426ae55c213523e498561ec3 160 Pfam PF04073 Aminoacyl-tRNA editing domain 39 147 3.9E-20 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 JV59_01080 e8ed6eb7426ae55c213523e498561ec3 160 SUPERFAMILY SSF55826 7 156 2.49E-35 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 JV59_32890 521ca7065fcbfade03d6e5de7cc3489d 624 Gene3D G3DSA:3.30.450.20 50 266 5.9E-68 T 14-10-2018 JV59_32890 521ca7065fcbfade03d6e5de7cc3489d 624 SMART SM00283 363 623 2.0E-59 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_32890 521ca7065fcbfade03d6e5de7cc3489d 624 Gene3D G3DSA:3.30.450.20 63 173 5.9E-68 T 14-10-2018 JV59_32890 521ca7065fcbfade03d6e5de7cc3489d 624 SUPERFAMILY SSF58104 316 615 2.88E-68 T 14-10-2018 JV59_32890 521ca7065fcbfade03d6e5de7cc3489d 624 Pfam PF02743 Cache domain 37 255 1.9E-30 T 14-10-2018 IPR033479 Double Cache domain 1 JV59_32890 521ca7065fcbfade03d6e5de7cc3489d 624 Gene3D G3DSA:1.10.287.950 292 624 3.8E-63 T 14-10-2018 JV59_32890 521ca7065fcbfade03d6e5de7cc3489d 624 SUPERFAMILY SSF103190 88 183 1.39E-13 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily JV59_32890 521ca7065fcbfade03d6e5de7cc3489d 624 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 435 589 2.3E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_32890 521ca7065fcbfade03d6e5de7cc3489d 624 SMART SM00304 292 348 1.6E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_32890 521ca7065fcbfade03d6e5de7cc3489d 624 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 406 4.0E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_32890 521ca7065fcbfade03d6e5de7cc3489d 624 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 490 519 4.0E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_39535 a9af029b8e2e858d0e5c78fab6d1a098 141 Gene3D G3DSA:3.40.50.620 2 141 2.4E-47 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_39535 a9af029b8e2e858d0e5c78fab6d1a098 141 PIRSF PIRSF006276 1 141 4.4E-52 T 14-10-2018 IPR006015 Universal stress protein A JV59_39535 a9af029b8e2e858d0e5c78fab6d1a098 141 Pfam PF00582 Universal stress protein family 3 138 6.8E-22 T 14-10-2018 IPR006016 UspA JV59_39535 a9af029b8e2e858d0e5c78fab6d1a098 141 SUPERFAMILY SSF52402 3 139 3.93E-33 T 14-10-2018 JV59_17810 b7718255c6ff7e31b8868ecd39e473e1 235 SUPERFAMILY SSF52172 7 152 8.97E-33 T 14-10-2018 IPR011006 CheY-like superfamily JV59_17810 b7718255c6ff7e31b8868ecd39e473e1 235 Gene3D G3DSA:3.40.50.2300 1 140 9.7E-33 T 14-10-2018 JV59_17810 b7718255c6ff7e31b8868ecd39e473e1 235 SMART SM00448 9 125 6.4E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_17810 b7718255c6ff7e31b8868ecd39e473e1 235 Pfam PF00072 Response regulator receiver domain 11 125 2.0E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_16400 ba7d664cf5c3e1c154629b90a8f73838 269 SMART SM00062 36 259 1.3E-45 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_16400 ba7d664cf5c3e1c154629b90a8f73838 269 Gene3D G3DSA:3.40.190.10 28 246 6.7E-60 T 14-10-2018 JV59_16400 ba7d664cf5c3e1c154629b90a8f73838 269 SMART SM00079 36 258 0.0025 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 JV59_16400 ba7d664cf5c3e1c154629b90a8f73838 269 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 257 1.7E-50 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_16400 ba7d664cf5c3e1c154629b90a8f73838 269 SUPERFAMILY SSF53850 9 256 1.09E-57 T 14-10-2018 JV59_16400 ba7d664cf5c3e1c154629b90a8f73838 269 Gene3D G3DSA:3.40.190.10 122 213 6.7E-60 T 14-10-2018 JV59_16595 1daa0dd6eb6ad29ecfa9cd5bdaf1a83a 392 Pfam PF07690 Major Facilitator Superfamily 17 349 6.9E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_16595 1daa0dd6eb6ad29ecfa9cd5bdaf1a83a 392 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 6 373 9.1E-60 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 JV59_16595 1daa0dd6eb6ad29ecfa9cd5bdaf1a83a 392 Gene3D G3DSA:1.20.1720.10 6 380 2.0E-82 T 14-10-2018 JV59_16595 1daa0dd6eb6ad29ecfa9cd5bdaf1a83a 392 SUPERFAMILY SSF103473 5 388 2.09E-54 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_38285 baa101cf8b7ef0aee1fe0c9879c812a9 422 Gene3D G3DSA:2.40.160.130 29 413 1.9E-24 T 14-10-2018 IPR038636 Capsule assembly protein Wzi superfamily JV59_33215 bf03f24c6a4b3ea6f3ec2e673dfa5a33 214 SUPERFAMILY SSF49464 120 181 1.33E-7 T 14-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily JV59_33215 bf03f24c6a4b3ea6f3ec2e673dfa5a33 214 Gene3D G3DSA:2.60.40.420 39 138 3.3E-10 T 14-10-2018 IPR008972 Cupredoxin JV59_33215 bf03f24c6a4b3ea6f3ec2e673dfa5a33 214 SUPERFAMILY SSF49503 58 138 6.38E-13 T 14-10-2018 IPR008972 Cupredoxin JV59_28445 3b064dd7aafde9ba85921e2c98e47455 501 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 255 498 2.6E-109 T 14-10-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase JV59_28445 3b064dd7aafde9ba85921e2c98e47455 501 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 24 183 6.0E-57 T 14-10-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices JV59_20950 c6744bb412efd03b83feda187306e6ca 349 Gene3D G3DSA:3.50.50.60 2 348 9.4E-111 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_20950 c6744bb412efd03b83feda187306e6ca 349 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 6 314 7.2E-32 T 14-10-2018 JV59_20950 c6744bb412efd03b83feda187306e6ca 349 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 120 128 1.9E-13 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JV59_20950 c6744bb412efd03b83feda187306e6ca 349 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 4 26 1.9E-13 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JV59_20950 c6744bb412efd03b83feda187306e6ca 349 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 159 183 1.9E-13 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JV59_20950 c6744bb412efd03b83feda187306e6ca 349 SUPERFAMILY SSF51905 3 191 1.18E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_20950 c6744bb412efd03b83feda187306e6ca 349 PIRSF PIRSF000332 1 202 3.6E-21 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 JV59_20950 c6744bb412efd03b83feda187306e6ca 349 PIRSF PIRSF000332 206 330 3.1 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 JV59_20950 c6744bb412efd03b83feda187306e6ca 349 SUPERFAMILY SSF51905 163 342 1.24E-7 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_20950 c6744bb412efd03b83feda187306e6ca 349 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 163 181 1.0E-5 T 14-10-2018 JV59_20950 c6744bb412efd03b83feda187306e6ca 349 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.0E-5 T 14-10-2018 JV59_27100 b1c9d15fee9a85d852fa8f1816386160 337 Gene3D G3DSA:1.20.272.10 213 336 1.3E-38 T 14-10-2018 JV59_27100 b1c9d15fee9a85d852fa8f1816386160 337 SUPERFAMILY SSF52540 1 208 2.0E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_27100 b1c9d15fee9a85d852fa8f1816386160 337 Pfam PF06144 DNA polymerase III, delta subunit 20 189 7.2E-47 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 JV59_27100 b1c9d15fee9a85d852fa8f1816386160 337 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 331 3.4E-102 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 JV59_27100 b1c9d15fee9a85d852fa8f1816386160 337 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 331 3.2E-31 T 14-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_27100 b1c9d15fee9a85d852fa8f1816386160 337 Gene3D G3DSA:1.10.8.60 144 212 2.3E-19 T 14-10-2018 JV59_27100 b1c9d15fee9a85d852fa8f1816386160 337 SUPERFAMILY SSF48019 211 332 4.85E-32 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 JV59_27100 b1c9d15fee9a85d852fa8f1816386160 337 Gene3D G3DSA:3.40.50.300 1 139 5.3E-49 T 14-10-2018 JV59_31705 d8739b28fef2369c7d2cec8e7a21df34 598 Pfam PF00664 ABC transporter transmembrane region 29 313 1.9E-31 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JV59_31705 d8739b28fef2369c7d2cec8e7a21df34 598 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_31705 d8739b28fef2369c7d2cec8e7a21df34 598 SUPERFAMILY SSF52540 355 592 7.67E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_31705 d8739b28fef2369c7d2cec8e7a21df34 598 Gene3D G3DSA:3.40.50.300 352 598 3.8E-81 T 14-10-2018 JV59_31705 d8739b28fef2369c7d2cec8e7a21df34 598 SMART SM00382 385 576 7.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_31705 d8739b28fef2369c7d2cec8e7a21df34 598 Pfam PF00005 ABC transporter 376 524 3.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_31705 d8739b28fef2369c7d2cec8e7a21df34 598 SUPERFAMILY SSF90123 12 345 4.58E-57 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_31705 d8739b28fef2369c7d2cec8e7a21df34 598 Gene3D G3DSA:1.20.1560.10 11 341 4.5E-57 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_34345 7ea76a94044d1f271c64c38f26947e39 435 SUPERFAMILY SSF56322 23 425 2.75E-99 T 14-10-2018 IPR005801 ADC synthase GO:0009058 JV59_34345 7ea76a94044d1f271c64c38f26947e39 435 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 427 31.425 T 14-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 JV59_34345 7ea76a94044d1f271c64c38f26947e39 435 Pfam PF00425 chorismate binding enzyme 164 417 1.4E-71 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal JV59_34345 7ea76a94044d1f271c64c38f26947e39 435 Gene3D G3DSA:3.60.120.10 1 428 2.7E-127 T 14-10-2018 IPR005801 ADC synthase GO:0009058 JV59_34345 7ea76a94044d1f271c64c38f26947e39 435 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 85 424 1.3E-102 T 14-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 JV59_18900 7d734881d8ddb59e8e10a972d151614a 208 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 206 3.6E-83 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 JV59_18900 7d734881d8ddb59e8e10a972d151614a 208 Gene3D G3DSA:3.20.20.70 1 208 6.3E-77 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_18900 7d734881d8ddb59e8e10a972d151614a 208 Pfam PF01081 KDPG and KHG aldolase 4 198 8.6E-78 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 JV59_18900 7d734881d8ddb59e8e10a972d151614a 208 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 14-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 JV59_18900 7d734881d8ddb59e8e10a972d151614a 208 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 JV59_18900 7d734881d8ddb59e8e10a972d151614a 208 SUPERFAMILY SSF51569 4 207 8.97E-68 T 14-10-2018 JV59_36030 b090e2a70ec13b9ff8b28408efb7b78f 249 SUPERFAMILY SSF110395 4 246 1.02E-69 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 JV59_36030 b090e2a70ec13b9ff8b28408efb7b78f 249 Pfam PF03932 CutC family 4 205 8.2E-76 T 14-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 JV59_36030 b090e2a70ec13b9ff8b28408efb7b78f 249 Gene3D G3DSA:3.20.20.380 2 248 7.6E-83 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 JV59_36030 b090e2a70ec13b9ff8b28408efb7b78f 249 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 207 29.413 T 14-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 JV59_31260 37b549ac42e0a2563587f23d4ab4a2c0 333 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 177 7.4E-29 T 14-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase JV59_34930 587d1bd6fa3ac2dac6d6dd68cdd40e19 250 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 1.0E-84 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_34930 587d1bd6fa3ac2dac6d6dd68cdd40e19 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 2.1E-64 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_34930 587d1bd6fa3ac2dac6d6dd68cdd40e19 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 2.1E-64 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_34930 587d1bd6fa3ac2dac6d6dd68cdd40e19 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 2.1E-64 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_34930 587d1bd6fa3ac2dac6d6dd68cdd40e19 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 2.1E-64 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_34930 587d1bd6fa3ac2dac6d6dd68cdd40e19 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 2.1E-64 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_34930 587d1bd6fa3ac2dac6d6dd68cdd40e19 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 2.1E-64 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 JV59_34930 587d1bd6fa3ac2dac6d6dd68cdd40e19 250 Pfam PF01578 Cytochrome C assembly protein 28 184 8.9E-32 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 JV59_18120 d9fd1af6fdbe76c17bbb9db32b63ad99 554 SUPERFAMILY SSF52540 18 291 5.4E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_18120 d9fd1af6fdbe76c17bbb9db32b63ad99 554 Pfam PF12592 Protein of unknown function (DUF3763) 484 536 4.0E-18 T 14-10-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 JV59_18120 d9fd1af6fdbe76c17bbb9db32b63ad99 554 Gene3D G3DSA:1.10.8.300 229 302 4.5E-27 T 14-10-2018 JV59_18120 d9fd1af6fdbe76c17bbb9db32b63ad99 554 Gene3D G3DSA:3.40.50.300 8 228 2.0E-58 T 14-10-2018 JV59_18120 d9fd1af6fdbe76c17bbb9db32b63ad99 554 Pfam PF07728 AAA domain (dynein-related subfamily) 49 179 7.1E-23 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 JV59_18120 d9fd1af6fdbe76c17bbb9db32b63ad99 554 SMART SM00382 46 189 9.3E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_17595 60b71d0ab46726ce5a0c7d715a95c32d 285 SUPERFAMILY SSF103481 191 270 3.27E-5 T 14-10-2018 JV59_17595 60b71d0ab46726ce5a0c7d715a95c32d 285 SUPERFAMILY SSF103481 24 120 2.75E-5 T 14-10-2018 JV59_17595 60b71d0ab46726ce5a0c7d715a95c32d 285 Pfam PF00892 EamA-like transporter family 139 265 6.7E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_16615 fc1fecd5d05913433e37a39e8e39961d 307 Pfam PF00892 EamA-like transporter family 168 302 1.5E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_16615 fc1fecd5d05913433e37a39e8e39961d 307 Pfam PF00892 EamA-like transporter family 18 155 5.2E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_16615 fc1fecd5d05913433e37a39e8e39961d 307 SUPERFAMILY SSF103481 63 158 5.1E-9 T 14-10-2018 JV59_16615 fc1fecd5d05913433e37a39e8e39961d 307 SUPERFAMILY SSF103481 220 305 1.26E-9 T 14-10-2018 JV59_00550 539c2376be119d14a27c264437eab769 569 Gene3D G3DSA:3.10.20.310 96 183 1.1E-30 T 14-10-2018 JV59_00550 539c2376be119d14a27c264437eab769 569 Gene3D G3DSA:3.10.20.310 20 95 9.1E-24 T 14-10-2018 JV59_00550 539c2376be119d14a27c264437eab769 569 Pfam PF17243 POTRA domain TamA domain 1 23 94 1.0E-19 T 14-10-2018 IPR035243 TamA, POTRA domain 1 JV59_00550 539c2376be119d14a27c264437eab769 569 Pfam PF01103 Surface antigen 270 566 1.5E-28 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 JV59_00550 539c2376be119d14a27c264437eab769 569 Pfam PF07244 Surface antigen variable number repeat 104 180 2.2E-6 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 JV59_00550 539c2376be119d14a27c264437eab769 569 Gene3D G3DSA:3.10.20.310 184 260 1.5E-15 T 14-10-2018 JV59_00550 539c2376be119d14a27c264437eab769 569 Gene3D G3DSA:2.40.160.50 261 569 1.4E-100 T 14-10-2018 JV59_38425 443f14d57153bb0258e219627e02d8e5 377 Gene3D G3DSA:3.30.1890.10 53 222 5.0E-34 T 14-10-2018 JV59_38425 443f14d57153bb0258e219627e02d8e5 377 Gene3D G3DSA:1.10.287.210 223 324 4.1E-19 T 14-10-2018 JV59_38425 443f14d57153bb0258e219627e02d8e5 377 Pfam PF02706 Chain length determinant protein 26 108 7.0E-16 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 JV59_38425 443f14d57153bb0258e219627e02d8e5 377 SUPERFAMILY SSF160355 65 339 9.03E-61 T 14-10-2018 JV59_29490 2b52b27e26e59c8b4bac89bd95a9728b 185 Gene3D G3DSA:3.40.50.10610 25 184 1.9E-6 T 14-10-2018 JV59_29490 2b52b27e26e59c8b4bac89bd95a9728b 185 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 31 181 4.3E-29 T 14-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component JV59_29490 2b52b27e26e59c8b4bac89bd95a9728b 185 SUPERFAMILY SSF159594 39 184 6.54E-26 T 14-10-2018 JV59_33890 b00529e7df78705d3e32fbbd1e5a9314 284 SUPERFAMILY SSF56112 30 269 5.54E-32 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily JV59_33890 b00529e7df78705d3e32fbbd1e5a9314 284 Pfam PF01636 Phosphotransferase enzyme family 32 227 3.4E-11 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase JV59_33890 b00529e7df78705d3e32fbbd1e5a9314 284 Gene3D G3DSA:3.90.1200.10 107 280 1.5E-14 T 14-10-2018 JV59_38165 d40b2c24e6ffaea14b13bfec0ecc8e2b 210 Pfam PF00929 Exonuclease 31 192 4.2E-19 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III JV59_38165 d40b2c24e6ffaea14b13bfec0ecc8e2b 210 SMART SM00479 29 202 4.4E-24 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III JV59_38165 d40b2c24e6ffaea14b13bfec0ecc8e2b 210 Gene3D G3DSA:3.30.420.10 23 200 2.6E-34 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JV59_38165 d40b2c24e6ffaea14b13bfec0ecc8e2b 210 SUPERFAMILY SSF53098 27 198 5.06E-35 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JV59_31970 d39cf70cb79cf698da7a1f99b382bab5 394 SUPERFAMILY SSF110997 316 381 7.19E-7 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 JV59_31970 d39cf70cb79cf698da7a1f99b382bab5 394 Gene3D G3DSA:1.25.40.590 48 205 3.2E-39 T 14-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily JV59_31970 d39cf70cb79cf698da7a1f99b382bab5 394 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 51 250 6.0E-37 T 14-10-2018 IPR017732 Type IV / VI secretion system, DotU JV59_31970 d39cf70cb79cf698da7a1f99b382bab5 394 Pfam PF05036 Sporulation related domain 316 384 1.1E-6 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 JV59_31970 d39cf70cb79cf698da7a1f99b382bab5 394 Pfam PF09850 Type VI secretion system protein DotU 53 245 5.8E-39 T 14-10-2018 IPR017732 Type IV / VI secretion system, DotU JV59_23575 ca91cb6c412c2bc6e4a72cfa14148170 435 Pfam PF07670 Nucleoside recognition 130 224 1.5E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 JV59_27835 a2a9935422a8e6254d939ba8490c4506 249 Pfam PF02108 Flagellar assembly protein FliH 105 227 8.6E-29 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE JV59_27835 a2a9935422a8e6254d939ba8490c4506 249 PRINTS PR01003 Flagellar assembly protein FliH signature 193 209 4.8E-5 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 JV59_27835 a2a9935422a8e6254d939ba8490c4506 249 PRINTS PR01003 Flagellar assembly protein FliH signature 64 86 4.8E-5 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 JV59_27835 a2a9935422a8e6254d939ba8490c4506 249 SUPERFAMILY SSF160527 133 240 3.4E-7 T 14-10-2018 JV59_39390 85cd15f7b4084519b059d05c445a6893 207 SUPERFAMILY SSF54980 139 204 3.6E-10 T 14-10-2018 IPR035647 EF-G domain III/V-like JV59_39390 85cd15f7b4084519b059d05c445a6893 207 SUPERFAMILY SSF54211 5 134 2.24E-41 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JV59_39390 85cd15f7b4084519b059d05c445a6893 207 Gene3D G3DSA:3.30.230.30 2 136 9.3E-49 T 14-10-2018 IPR036956 Impact, N-terminal domain superfamily JV59_39390 85cd15f7b4084519b059d05c445a6893 207 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 5 198 5.2E-66 T 14-10-2018 IPR015796 Impact family, bacterial/archaeal JV59_39390 85cd15f7b4084519b059d05c445a6893 207 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 1.2E-25 T 14-10-2018 IPR001498 Impact, N-terminal JV59_39390 85cd15f7b4084519b059d05c445a6893 207 Pfam PF09186 Domain of unknown function (DUF1949) 143 196 6.1E-11 T 14-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal JV59_30335 1246ba945b30f1e1343fa579313c1ab4 243 Pfam PF12833 Helix-turn-helix domain 164 240 2.2E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_30335 1246ba945b30f1e1343fa579313c1ab4 243 Pfam PF02311 AraC-like ligand binding domain 11 146 9.6E-9 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 JV59_30335 1246ba945b30f1e1343fa579313c1ab4 243 SUPERFAMILY SSF51182 7 165 2.55E-11 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JV59_30335 1246ba945b30f1e1343fa579313c1ab4 243 Gene3D G3DSA:2.60.120.10 2 80 1.9E-7 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_30335 1246ba945b30f1e1343fa579313c1ab4 243 SMART SM00342 158 240 8.1E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_30335 1246ba945b30f1e1343fa579313c1ab4 243 SUPERFAMILY SSF46689 199 239 1.25E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_30335 1246ba945b30f1e1343fa579313c1ab4 243 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 224 240 1.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_30335 1246ba945b30f1e1343fa579313c1ab4 243 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 209 224 1.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_30335 1246ba945b30f1e1343fa579313c1ab4 243 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 195 236 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JV59_30335 1246ba945b30f1e1343fa579313c1ab4 243 Gene3D G3DSA:1.10.10.60 139 243 1.1E-21 T 14-10-2018 JV59_23095 f0cf537507f60bad6827c83699a997d1 238 Gene3D G3DSA:1.10.10.200 17 78 4.6E-17 T 14-10-2018 IPR017856 Integrase-like, N-terminal JV59_23095 f0cf537507f60bad6827c83699a997d1 238 SUPERFAMILY SSF75625 1 237 1.7E-74 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_23095 f0cf537507f60bad6827c83699a997d1 238 Pfam PF01709 Transcriptional regulator 5 236 5.5E-71 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_23095 f0cf537507f60bad6827c83699a997d1 238 Gene3D G3DSA:3.30.70.980 131 202 3.5E-44 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_23095 f0cf537507f60bad6827c83699a997d1 238 Gene3D G3DSA:3.30.70.980 83 235 3.5E-44 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_23095 f0cf537507f60bad6827c83699a997d1 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 26.948 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_18795 d5bda095379f12c31f6839a3ab18e795 191 PIRSF PIRSF011489 1 191 1.5E-77 T 14-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 JV59_18795 d5bda095379f12c31f6839a3ab18e795 191 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 5.8E-29 T 14-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 JV59_34550 dfdcfd537ab885059a1beff7b5623d36 562 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 5.5E-18 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JV59_34550 dfdcfd537ab885059a1beff7b5623d36 562 Pfam PF00501 AMP-binding enzyme 29 461 9.7E-108 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JV59_34550 dfdcfd537ab885059a1beff7b5623d36 562 SUPERFAMILY SSF56801 13 553 1.22E-150 T 14-10-2018 JV59_34550 dfdcfd537ab885059a1beff7b5623d36 562 Gene3D G3DSA:3.30.300.310 458 559 2.5E-30 T 14-10-2018 JV59_34550 dfdcfd537ab885059a1beff7b5623d36 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 14-10-2018 IPR020845 AMP-binding, conserved site JV59_34550 dfdcfd537ab885059a1beff7b5623d36 562 Gene3D G3DSA:3.40.50.12780 9 457 1.5E-117 T 14-10-2018 JV59_21435 be3f406865c08c05215448e35d002ab5 440 SUPERFAMILY SSF52425 3 185 1.7E-35 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 JV59_21435 be3f406865c08c05215448e35d002ab5 440 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 4 416 4.6E-158 T 14-10-2018 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 JV59_21435 be3f406865c08c05215448e35d002ab5 440 Gene3D G3DSA:1.10.579.10 299 434 9.7E-52 T 14-10-2018 JV59_21435 be3f406865c08c05215448e35d002ab5 440 Gene3D G3DSA:3.40.50.620 1 134 4.1E-25 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_21435 be3f406865c08c05215448e35d002ab5 440 PRINTS PR00147 DNA photolyase signature 318 334 1.8E-11 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 JV59_21435 be3f406865c08c05215448e35d002ab5 440 PRINTS PR00147 DNA photolyase signature 338 356 1.8E-11 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 JV59_21435 be3f406865c08c05215448e35d002ab5 440 PRINTS PR00147 DNA photolyase signature 377 391 1.8E-11 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 JV59_21435 be3f406865c08c05215448e35d002ab5 440 Gene3D G3DSA:1.25.40.80 135 291 1.6E-40 T 14-10-2018 JV59_21435 be3f406865c08c05215448e35d002ab5 440 Pfam PF00875 DNA photolyase 7 163 1.2E-25 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 JV59_21435 be3f406865c08c05215448e35d002ab5 440 Pfam PF03441 FAD binding domain of DNA photolyase 271 416 3.9E-40 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 JV59_21435 be3f406865c08c05215448e35d002ab5 440 SUPERFAMILY SSF48173 192 417 2.75E-68 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 JV59_20340 afebb4dc225ad3b18d3da67dacfce48a 146 SMART SM00344 1 110 3.8E-39 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 JV59_20340 afebb4dc225ad3b18d3da67dacfce48a 146 Pfam PF01037 Lrp/AsnC ligand binding domain 67 141 9.3E-17 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JV59_20340 afebb4dc225ad3b18d3da67dacfce48a 146 SUPERFAMILY SSF54909 63 145 1.3E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_20340 afebb4dc225ad3b18d3da67dacfce48a 146 SUPERFAMILY SSF46785 1 60 7.46E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_20340 afebb4dc225ad3b18d3da67dacfce48a 146 Gene3D G3DSA:3.30.70.920 55 137 2.6E-19 T 14-10-2018 JV59_20340 afebb4dc225ad3b18d3da67dacfce48a 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.8E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_20340 afebb4dc225ad3b18d3da67dacfce48a 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.8E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_20340 afebb4dc225ad3b18d3da67dacfce48a 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.8E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_20340 afebb4dc225ad3b18d3da67dacfce48a 146 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site JV59_20340 afebb4dc225ad3b18d3da67dacfce48a 146 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 5.5E-18 T 14-10-2018 JV59_20340 afebb4dc225ad3b18d3da67dacfce48a 146 Gene3D G3DSA:1.10.10.10 1 54 7.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_27070 d740497ef0217df75cdbcf909632261f 92 Gene3D G3DSA:3.30.70.260 6 92 1.3E-33 T 14-10-2018 JV59_27070 d740497ef0217df75cdbcf909632261f 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 8.6E-30 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 JV59_27070 d740497ef0217df75cdbcf909632261f 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 26.417 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 JV59_27070 d740497ef0217df75cdbcf909632261f 92 SUPERFAMILY SSF117991 7 92 2.75E-31 T 14-10-2018 IPR027471 YbeD-like domain superfamily JV59_30300 bc6137a382f37265331a8ad43d69f2c7 235 Pfam PF13489 Methyltransferase domain 52 199 8.4E-26 T 14-10-2018 JV59_30300 bc6137a382f37265331a8ad43d69f2c7 235 Gene3D G3DSA:3.40.50.150 11 235 2.2E-75 T 14-10-2018 JV59_30300 bc6137a382f37265331a8ad43d69f2c7 235 SUPERFAMILY SSF53335 15 214 9.22E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_30300 bc6137a382f37265331a8ad43d69f2c7 235 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 11 235 37.376 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 JV59_30300 bc6137a382f37265331a8ad43d69f2c7 235 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 6.4E-87 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 JV59_23000 07b20d8749333e5303fb820373ae2b94 137 SUPERFAMILY SSF46626 50 109 4.04E-6 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_23000 07b20d8749333e5303fb820373ae2b94 137 Gene3D G3DSA:1.10.760.10 48 109 1.9E-6 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_17625 7df1e34bc23bab0f612a889c87f2b1d9 308 SUPERFAMILY SSF53300 88 232 5.86E-6 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JV59_17625 7df1e34bc23bab0f612a889c87f2b1d9 308 Pfam PF01882 Protein of unknown function DUF58 52 136 1.2E-21 T 14-10-2018 IPR002881 Domain of unknown function DUF58 JV59_33565 0a4b4bf1a4454dc9251c7bd5c78ccb40 759 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 756 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 JV59_33565 0a4b4bf1a4454dc9251c7bd5c78ccb40 759 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 757 35.866 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 JV59_33565 0a4b4bf1a4454dc9251c7bd5c78ccb40 759 SUPERFAMILY SSF51726 395 757 5.23E-115 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 JV59_33565 0a4b4bf1a4454dc9251c7bd5c78ccb40 759 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 315 2.8E-120 T 14-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 JV59_33565 0a4b4bf1a4454dc9251c7bd5c78ccb40 759 SUPERFAMILY SSF51726 4 392 1.7E-105 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 JV59_33565 0a4b4bf1a4454dc9251c7bd5c78ccb40 759 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 430 752 1.4E-151 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 JV59_33565 0a4b4bf1a4454dc9251c7bd5c78ccb40 759 Gene3D G3DSA:3.20.20.210 388 755 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 JV59_33565 0a4b4bf1a4454dc9251c7bd5c78ccb40 759 PIRSF PIRSF000382 1 759 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 JV59_33565 0a4b4bf1a4454dc9251c7bd5c78ccb40 759 Gene3D G3DSA:3.20.20.210 6 523 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 JV59_28225 ee0665a84197c0168e5a534906c028da 94 Gene3D G3DSA:3.30.70.100 1 94 4.9E-26 T 14-10-2018 JV59_28225 ee0665a84197c0168e5a534906c028da 94 SUPERFAMILY SSF54909 1 93 1.36E-25 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_28225 ee0665a84197c0168e5a534906c028da 94 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 73 2.0E-13 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain JV59_32635 b90eb419e1a42aa918bcb3a7db5d164b 184 Gene3D G3DSA:3.40.630.30 1 182 3.8E-37 T 14-10-2018 JV59_32635 b90eb419e1a42aa918bcb3a7db5d164b 184 SUPERFAMILY SSF55729 3 171 7.31E-36 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_32635 b90eb419e1a42aa918bcb3a7db5d164b 184 Pfam PF13302 Acetyltransferase (GNAT) domain 8 147 5.9E-21 T 14-10-2018 IPR000182 GNAT domain JV59_38685 cf1a346efa0586e03d6ea24954831363 321 PIRSF PIRSF026649 14 317 7.8E-89 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 JV59_38685 cf1a346efa0586e03d6ea24954831363 321 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 8 314 49.905 T 14-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 JV59_38685 cf1a346efa0586e03d6ea24954831363 321 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 15 317 4.1E-117 T 14-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 JV59_38685 cf1a346efa0586e03d6ea24954831363 321 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 16 309 4.8E-78 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 JV59_22165 3c931e4dabf16382e362f67d6ad3c1da 180 SUPERFAMILY SSF54427 43 164 2.0E-23 T 14-10-2018 IPR032710 NTF2-like domain superfamily JV59_22165 3c931e4dabf16382e362f67d6ad3c1da 180 Pfam PF12680 SnoaL-like domain 50 151 1.1E-12 T 14-10-2018 IPR037401 SnoaL-like domain JV59_22165 3c931e4dabf16382e362f67d6ad3c1da 180 Gene3D G3DSA:3.10.450.50 36 161 1.3E-30 T 14-10-2018 JV59_30185 d2be35bd745a017ab439bcbdfbb43f1b 579 Gene3D G3DSA:3.40.50.300 210 370 1.8E-33 T 14-10-2018 JV59_30185 d2be35bd745a017ab439bcbdfbb43f1b 579 Pfam PF00271 Helicase conserved C-terminal domain 239 342 1.4E-13 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_30185 d2be35bd745a017ab439bcbdfbb43f1b 579 SUPERFAMILY SSF57829 424 465 2.38E-6 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 JV59_30185 d2be35bd745a017ab439bcbdfbb43f1b 579 Gene3D G3DSA:3.40.50.300 1 168 8.4E-29 T 14-10-2018 JV59_30185 d2be35bd745a017ab439bcbdfbb43f1b 579 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 1.2E-22 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 JV59_30185 d2be35bd745a017ab439bcbdfbb43f1b 579 SMART SM00487 1 184 5.1E-14 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JV59_30185 d2be35bd745a017ab439bcbdfbb43f1b 579 SMART SM00490 265 344 8.7E-11 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_30185 d2be35bd745a017ab439bcbdfbb43f1b 579 SUPERFAMILY SSF52540 49 359 1.16E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_35845 1f8afb63239f71fc2394afc2343361c0 323 SMART SM00260 14 160 3.8E-23 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JV59_35845 1f8afb63239f71fc2394afc2343361c0 323 SMART SM00448 193 318 5.5E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_35845 1f8afb63239f71fc2394afc2343361c0 323 Gene3D G3DSA:2.30.30.40 37 154 9.4E-30 T 14-10-2018 JV59_35845 1f8afb63239f71fc2394afc2343361c0 323 SUPERFAMILY SSF50341 8 165 3.79E-32 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 JV59_35845 1f8afb63239f71fc2394afc2343361c0 323 SUPERFAMILY SSF52172 193 321 2.42E-28 T 14-10-2018 IPR011006 CheY-like superfamily JV59_35845 1f8afb63239f71fc2394afc2343361c0 323 Gene3D G3DSA:3.40.50.2300 179 322 1.7E-28 T 14-10-2018 JV59_35845 1f8afb63239f71fc2394afc2343361c0 323 Gene3D G3DSA:2.40.50.180 44 160 9.4E-30 T 14-10-2018 JV59_35845 1f8afb63239f71fc2394afc2343361c0 323 PIRSF PIRSF002867 1 323 3.3E-103 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV JV59_35845 1f8afb63239f71fc2394afc2343361c0 323 Pfam PF01584 CheW-like domain 37 162 2.0E-30 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JV59_35845 1f8afb63239f71fc2394afc2343361c0 323 Pfam PF00072 Response regulator receiver domain 195 316 7.6E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_19160 2ecd7074c8e50cb21b59c2aa2cf95f26 185 Gene3D G3DSA:2.30.30.40 116 185 3.6E-22 T 14-10-2018 JV59_19160 2ecd7074c8e50cb21b59c2aa2cf95f26 185 SUPERFAMILY SSF82057 118 184 3.43E-19 T 14-10-2018 JV59_19160 2ecd7074c8e50cb21b59c2aa2cf95f26 185 Pfam PF08274 PhnA Zinc-Ribbon 13 52 9.3E-10 T 14-10-2018 IPR013987 PhnA protein, N-terminal JV59_19160 2ecd7074c8e50cb21b59c2aa2cf95f26 185 SMART SM00782 6 52 2.3E-26 T 14-10-2018 IPR013991 PhnA protein N-terminal, proteobacterial JV59_19160 2ecd7074c8e50cb21b59c2aa2cf95f26 185 Pfam PF03831 PhnA domain 120 184 4.8E-21 T 14-10-2018 IPR013988 PhnA protein, C-terminal JV59_30710 d28b556e19e6b64a64e3e239b9bc3cb8 266 Gene3D G3DSA:3.40.190.10 103 203 1.1E-35 T 14-10-2018 JV59_30710 d28b556e19e6b64a64e3e239b9bc3cb8 266 Gene3D G3DSA:3.40.190.10 24 234 1.1E-35 T 14-10-2018 JV59_30710 d28b556e19e6b64a64e3e239b9bc3cb8 266 SUPERFAMILY SSF53850 21 261 4.54E-20 T 14-10-2018 JV59_30710 d28b556e19e6b64a64e3e239b9bc3cb8 266 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 24 254 1.0E-51 T 14-10-2018 JV59_21085 e15bf89304208390701b253a74c4b6d2 636 SUPERFAMILY SSF58104 326 635 6.02E-71 T 14-10-2018 JV59_21085 e15bf89304208390701b253a74c4b6d2 636 Gene3D G3DSA:3.30.450.20 84 175 1.1E-19 T 14-10-2018 JV59_21085 e15bf89304208390701b253a74c4b6d2 636 Gene3D G3DSA:1.10.287.950 304 636 1.2E-67 T 14-10-2018 JV59_21085 e15bf89304208390701b253a74c4b6d2 636 Gene3D G3DSA:3.30.450.20 176 277 1.1E-19 T 14-10-2018 JV59_21085 e15bf89304208390701b253a74c4b6d2 636 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 436 601 3.0E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_21085 e15bf89304208390701b253a74c4b6d2 636 SMART SM00283 373 634 1.3E-61 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_21085 e15bf89304208390701b253a74c4b6d2 636 SMART SM00304 304 358 2.9E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_27895 02acc1b0173ba14dfa19a4d43e118fe3 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 35.839 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JV59_27895 02acc1b0173ba14dfa19a4d43e118fe3 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 3.1E-71 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JV59_27895 02acc1b0173ba14dfa19a4d43e118fe3 159 SUPERFAMILY SSF55040 11 155 8.63E-62 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JV59_27895 02acc1b0173ba14dfa19a4d43e118fe3 159 Gene3D G3DSA:3.30.70.640 1 159 5.3E-70 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JV59_27895 02acc1b0173ba14dfa19a4d43e118fe3 159 Pfam PF01967 MoaC family 15 150 5.7E-56 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JV59_16850 2037afe4d6fb8098b340bd26a76794d2 495 SUPERFAMILY SSF56801 4 494 1.09E-145 T 14-10-2018 JV59_16850 2037afe4d6fb8098b340bd26a76794d2 495 Pfam PF00501 AMP-binding enzyme 9 402 3.9E-101 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JV59_16850 2037afe4d6fb8098b340bd26a76794d2 495 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 30 426 6.4E-130 T 14-10-2018 IPR010071 Amino acid adenylation domain JV59_16850 2037afe4d6fb8098b340bd26a76794d2 495 ProSitePatterns PS00455 Putative AMP-binding domain signature. 148 159 - T 14-10-2018 IPR020845 AMP-binding, conserved site JV59_16850 2037afe4d6fb8098b340bd26a76794d2 495 Pfam PF13193 AMP-binding enzyme C-terminal domain 410 486 1.1E-9 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JV59_16850 2037afe4d6fb8098b340bd26a76794d2 495 Gene3D G3DSA:3.40.50.12780 1 396 2.6E-133 T 14-10-2018 JV59_16850 2037afe4d6fb8098b340bd26a76794d2 495 PRINTS PR00154 AMP-binding signature 143 154 9.4E-5 T 14-10-2018 IPR020459 AMP-binding JV59_16850 2037afe4d6fb8098b340bd26a76794d2 495 PRINTS PR00154 AMP-binding signature 155 163 9.4E-5 T 14-10-2018 IPR020459 AMP-binding JV59_16850 2037afe4d6fb8098b340bd26a76794d2 495 Gene3D G3DSA:3.30.300.30 397 495 5.2E-28 T 14-10-2018 JV59_31285 ff4b4e59cee8c1ede2b7e81916aa0734 71 SUPERFAMILY SSF140129 1 67 1.12E-18 T 14-10-2018 IPR037203 Type III secretion, needle-protein-like superfamily GO:0009405|GO:0015031 JV59_31285 ff4b4e59cee8c1ede2b7e81916aa0734 71 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 3 71 7.3E-22 T 14-10-2018 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 JV59_31285 ff4b4e59cee8c1ede2b7e81916aa0734 71 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 1 71 1.3E-21 T 14-10-2018 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 JV59_18955 790b33478d21aed88d383d48abdf68c1 295 SUPERFAMILY SSF46689 245 291 1.52E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_18955 790b33478d21aed88d383d48abdf68c1 295 SUPERFAMILY SSF46689 192 243 4.98E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_18955 790b33478d21aed88d383d48abdf68c1 295 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 246 288 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JV59_18955 790b33478d21aed88d383d48abdf68c1 295 SMART SM00342 209 292 5.9E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_18955 790b33478d21aed88d383d48abdf68c1 295 Gene3D G3DSA:1.10.10.60 188 293 1.8E-26 T 14-10-2018 JV59_18955 790b33478d21aed88d383d48abdf68c1 295 Pfam PF12833 Helix-turn-helix domain 215 289 4.3E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_18955 790b33478d21aed88d383d48abdf68c1 295 Pfam PF06719 AraC-type transcriptional regulator N-terminus 27 180 5.3E-32 T 14-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal JV59_36930 07193addc3468abebc83ad892614ff1e 243 Gene3D G3DSA:3.20.20.70 1 243 3.1E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_36930 07193addc3468abebc83ad892614ff1e 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 2.1E-98 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 JV59_36930 07193addc3468abebc83ad892614ff1e 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 7.8E-105 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 JV59_36930 07193addc3468abebc83ad892614ff1e 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 132.91 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 JV59_36930 07193addc3468abebc83ad892614ff1e 243 SUPERFAMILY SSF63892 4 242 1.44E-101 T 14-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 JV59_21605 f19d2eb593f54b5beb7c2bdf8f7b822b 538 SUPERFAMILY SSF51905 100 529 3.99E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_21605 f19d2eb593f54b5beb7c2bdf8f7b822b 538 Gene3D G3DSA:3.50.50.60 85 303 1.1E-89 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_21605 f19d2eb593f54b5beb7c2bdf8f7b822b 538 Gene3D G3DSA:3.50.50.60 468 533 6.3E-15 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_21605 f19d2eb593f54b5beb7c2bdf8f7b822b 538 PIRSF PIRSF038984 1 534 6.1E-237 T 14-10-2018 IPR028348 FAD dependent protein JV59_21605 f19d2eb593f54b5beb7c2bdf8f7b822b 538 Gene3D G3DSA:3.30.70.2700 1 80 1.5E-31 T 14-10-2018 JV59_21605 f19d2eb593f54b5beb7c2bdf8f7b822b 538 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 100 268 4.0E-6 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JV59_21965 acb2f77420511db879ed5f1749069765 436 Gene3D G3DSA:3.50.50.60 1 419 7.5E-117 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_21965 acb2f77420511db879ed5f1749069765 436 SUPERFAMILY SSF51905 6 225 3.11E-22 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_21965 acb2f77420511db879ed5f1749069765 436 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 8 336 1.4E-105 T 14-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase JV59_18560 201a8dfd874be36ddb9ab284c6c6d5f5 865 SUPERFAMILY SSF50692 547 686 3.39E-28 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily JV59_18560 201a8dfd874be36ddb9ab284c6c6d5f5 865 PIRSF PIRSF036643 1 709 3.1E-131 T 14-10-2018 JV59_18560 201a8dfd874be36ddb9ab284c6c6d5f5 865 Pfam PF04324 BFD-like [2Fe-2S] binding domain 806 855 4.1E-11 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain JV59_18560 201a8dfd874be36ddb9ab284c6c6d5f5 865 Gene3D G3DSA:3.40.228.10 129 332 5.3E-155 T 14-10-2018 JV59_18560 201a8dfd874be36ddb9ab284c6c6d5f5 865 Gene3D G3DSA:2.40.40.20 564 692 4.6E-27 T 14-10-2018 JV59_18560 201a8dfd874be36ddb9ab284c6c6d5f5 865 SMART SM00926 6 52 1.1E-11 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_18560 201a8dfd874be36ddb9ab284c6c6d5f5 865 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 8 25 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 JV59_18560 201a8dfd874be36ddb9ab284c6c6d5f5 865 Gene3D G3DSA:3.40.50.740 64 506 5.3E-155 T 14-10-2018 JV59_18560 201a8dfd874be36ddb9ab284c6c6d5f5 865 SUPERFAMILY SSF53706 5 571 4.71E-164 T 14-10-2018 JV59_18560 201a8dfd874be36ddb9ab284c6c6d5f5 865 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 6 51 7.1E-13 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_18560 201a8dfd874be36ddb9ab284c6c6d5f5 865 Pfam PF01568 Molydopterin dinucleotide binding domain 572 680 4.0E-24 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 JV59_18560 201a8dfd874be36ddb9ab284c6c6d5f5 865 Pfam PF00384 Molybdopterin oxidoreductase 64 477 6.8E-77 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_18560 201a8dfd874be36ddb9ab284c6c6d5f5 865 Gene3D G3DSA:2.20.25.90 5 51 9.6E-11 T 14-10-2018 JV59_18560 201a8dfd874be36ddb9ab284c6c6d5f5 865 Gene3D G3DSA:1.10.10.1100 806 861 5.6E-12 T 14-10-2018 JV59_24605 c9762be14f334b0ad249ec65da40021d 173 Pfam PF13527 Acetyltransferase (GNAT) domain 9 123 2.2E-8 T 14-10-2018 JV59_24605 c9762be14f334b0ad249ec65da40021d 173 SUPERFAMILY SSF55729 9 132 2.19E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_24605 c9762be14f334b0ad249ec65da40021d 173 Gene3D G3DSA:3.40.630.30 1 160 1.7E-22 T 14-10-2018 JV59_28010 f297b48e81b20dc9de9458caf258b3e8 141 Gene3D G3DSA:3.40.50.2300 1 141 2.3E-53 T 14-10-2018 JV59_28010 f297b48e81b20dc9de9458caf258b3e8 141 SUPERFAMILY SSF52788 1 140 2.22E-42 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily JV59_28010 f297b48e81b20dc9de9458caf258b3e8 141 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 1 138 7.3E-35 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I JV59_28010 f297b48e81b20dc9de9458caf258b3e8 141 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 112 127 3.8E-12 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 JV59_28010 f297b48e81b20dc9de9458caf258b3e8 141 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 71 86 3.8E-12 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 JV59_28010 f297b48e81b20dc9de9458caf258b3e8 141 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 37 53 3.8E-12 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 JV59_28010 f297b48e81b20dc9de9458caf258b3e8 141 SMART SM00226 2 140 8.9E-36 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I JV59_00180 9d8a889f9b1e6a36a85d8acb1ae7af89 172 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 4.1E-67 T 14-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 JV59_00180 9d8a889f9b1e6a36a85d8acb1ae7af89 172 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 47.121 T 14-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 JV59_00180 9d8a889f9b1e6a36a85d8acb1ae7af89 172 Pfam PF03737 Aldolase/RraA 6 152 6.3E-39 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein JV59_00180 9d8a889f9b1e6a36a85d8acb1ae7af89 172 Gene3D G3DSA:3.50.30.40 1 161 2.9E-61 T 14-10-2018 JV59_00180 9d8a889f9b1e6a36a85d8acb1ae7af89 172 SUPERFAMILY SSF89562 2 158 1.57E-46 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily JV59_00180 9d8a889f9b1e6a36a85d8acb1ae7af89 172 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 9.5E-84 T 14-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 JV59_22950 c23c6b08f7c52e79e9a99781d7408e51 298 PIRSF PIRSF000103 1 296 1.6E-77 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 JV59_22950 c23c6b08f7c52e79e9a99781d7408e51 298 SUPERFAMILY SSF51735 1 166 3.09E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_22950 c23c6b08f7c52e79e9a99781d7408e51 298 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 2 295 9.8E-121 T 14-10-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 JV59_22950 c23c6b08f7c52e79e9a99781d7408e51 298 SUPERFAMILY SSF48179 167 295 4.42E-38 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JV59_22950 c23c6b08f7c52e79e9a99781d7408e51 298 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 287 3.1E-37 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 JV59_22950 c23c6b08f7c52e79e9a99781d7408e51 298 Gene3D G3DSA:1.10.1040.10 164 295 2.1E-38 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JV59_22950 c23c6b08f7c52e79e9a99781d7408e51 298 Gene3D G3DSA:3.40.50.720 1 163 1.9E-50 T 14-10-2018 JV59_22950 c23c6b08f7c52e79e9a99781d7408e51 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 165 2.8E-47 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 JV59_33120 182e6276fa5a1c46461584fe72c31945 781 Gene3D G3DSA:3.40.50.300 2 167 9.7E-46 T 14-10-2018 JV59_33120 182e6276fa5a1c46461584fe72c31945 781 Gene3D G3DSA:3.40.50.300 169 331 2.0E-40 T 14-10-2018 JV59_33120 182e6276fa5a1c46461584fe72c31945 781 SMART SM00490 218 314 5.3E-14 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_33120 182e6276fa5a1c46461584fe72c31945 781 SUPERFAMILY SSF52540 18 325 9.25E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_33120 182e6276fa5a1c46461584fe72c31945 781 Gene3D G3DSA:1.20.120.1080 355 453 3.9E-6 T 14-10-2018 JV59_33120 182e6276fa5a1c46461584fe72c31945 781 Pfam PF04408 Helicase associated domain (HA2) 372 455 4.3E-5 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 JV59_33120 182e6276fa5a1c46461584fe72c31945 781 Pfam PF00271 Helicase conserved C-terminal domain 202 313 1.7E-14 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_33120 182e6276fa5a1c46461584fe72c31945 781 Pfam PF00270 DEAD/DEAH box helicase 16 152 1.3E-9 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JV59_33120 182e6276fa5a1c46461584fe72c31945 781 SMART SM00487 1 174 3.4E-15 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JV59_28590 efcb978ecbacbb0cb7f187c1a1802c3c 334 SUPERFAMILY SSF46785 262 332 2.29E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_28590 efcb978ecbacbb0cb7f187c1a1802c3c 334 Gene3D G3DSA:1.10.10.10 262 334 4.3E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_28590 efcb978ecbacbb0cb7f187c1a1802c3c 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 331 2.2E-146 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 JV59_28590 efcb978ecbacbb0cb7f187c1a1802c3c 334 Gene3D G3DSA:3.40.50.300 25 186 1.3E-40 T 14-10-2018 JV59_28590 efcb978ecbacbb0cb7f187c1a1802c3c 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 5.0E-39 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 JV59_28590 efcb978ecbacbb0cb7f187c1a1802c3c 334 SUPERFAMILY SSF52540 25 256 4.37E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_28590 efcb978ecbacbb0cb7f187c1a1802c3c 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 14 240 1.4E-116 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 JV59_28590 efcb978ecbacbb0cb7f187c1a1802c3c 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 182.604 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 JV59_28590 efcb978ecbacbb0cb7f187c1a1802c3c 334 Gene3D G3DSA:1.10.8.60 187 260 1.6E-30 T 14-10-2018 JV59_28590 efcb978ecbacbb0cb7f187c1a1802c3c 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 1.6E-33 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 JV59_28590 efcb978ecbacbb0cb7f187c1a1802c3c 334 SMART SM00382 56 189 2.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_35860 130340334424fa63469ed3bf07cc4284 325 SUPERFAMILY SSF81324 232 324 3.14E-16 T 14-10-2018 JV59_35860 130340334424fa63469ed3bf07cc4284 325 Pfam PF07885 Ion channel 237 324 4.5E-15 T 14-10-2018 IPR013099 Potassium channel domain JV59_35860 130340334424fa63469ed3bf07cc4284 325 Gene3D G3DSA:1.10.287.70 228 325 7.6E-15 T 14-10-2018 JV59_35860 130340334424fa63469ed3bf07cc4284 325 Gene3D G3DSA:2.160.20.100 42 182 1.5E-13 T 14-10-2018 JV59_35860 130340334424fa63469ed3bf07cc4284 325 Pfam PF00805 Pentapeptide repeats (8 copies) 101 139 2.2E-5 T 14-10-2018 IPR001646 Pentapeptide repeat JV59_35860 130340334424fa63469ed3bf07cc4284 325 SUPERFAMILY SSF141571 57 140 3.53E-14 T 14-10-2018 JV59_39895 f3c5309b1de69ec86f7e94af9e396114 433 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.391 T 14-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 JV59_39895 f3c5309b1de69ec86f7e94af9e396114 433 SMART SM00487 28 234 2.3E-56 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JV59_39895 f3c5309b1de69ec86f7e94af9e396114 433 SUPERFAMILY SSF52540 85 363 3.01E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_39895 f3c5309b1de69ec86f7e94af9e396114 433 SMART SM00490 270 351 6.5E-32 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_39895 f3c5309b1de69ec86f7e94af9e396114 433 Gene3D G3DSA:3.40.50.300 2 222 5.4E-73 T 14-10-2018 JV59_39895 f3c5309b1de69ec86f7e94af9e396114 433 Gene3D G3DSA:3.40.50.300 230 405 1.2E-45 T 14-10-2018 JV59_39895 f3c5309b1de69ec86f7e94af9e396114 433 Pfam PF00271 Helicase conserved C-terminal domain 244 351 4.4E-30 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_39895 f3c5309b1de69ec86f7e94af9e396114 433 Pfam PF00270 DEAD/DEAH box helicase 33 207 8.2E-46 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JV59_39895 f3c5309b1de69ec86f7e94af9e396114 433 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JV59_01690 9786f90e0f1db4c7e42c70e809b8ade8 428 Gene3D G3DSA:3.10.450.350 67 157 1.7E-9 T 14-10-2018 JV59_01690 9786f90e0f1db4c7e42c70e809b8ade8 428 SUPERFAMILY SSF51261 143 389 2.98E-70 T 14-10-2018 IPR011055 Duplicated hybrid motif JV59_01690 9786f90e0f1db4c7e42c70e809b8ade8 428 Pfam PF08525 Opacity-associated protein A N-terminal motif 4 31 1.3E-6 T 14-10-2018 IPR013731 Opacity-associated protein A, N-terminal JV59_01690 9786f90e0f1db4c7e42c70e809b8ade8 428 Gene3D G3DSA:3.10.450.350 172 408 5.1E-81 T 14-10-2018 JV59_01690 9786f90e0f1db4c7e42c70e809b8ade8 428 Gene3D G3DSA:2.70.70.10 265 394 5.1E-81 T 14-10-2018 IPR011055 Duplicated hybrid motif JV59_01690 9786f90e0f1db4c7e42c70e809b8ade8 428 Pfam PF01551 Peptidase family M23 294 388 8.7E-31 T 14-10-2018 IPR016047 Peptidase M23 JV59_30625 308d719150fd3082ccb77b12b795a874 322 SMART SM01006 154 202 2.1E-14 T 14-10-2018 IPR019432 Siderophore biosynthesis protein, conserved domain JV59_30625 308d719150fd3082ccb77b12b795a874 322 Pfam PF13523 Acetyltransferase (GNAT) domain 157 302 2.2E-49 T 14-10-2018 JV59_30625 308d719150fd3082ccb77b12b795a874 322 SUPERFAMILY SSF55729 127 315 1.4E-58 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_30625 308d719150fd3082ccb77b12b795a874 322 Gene3D G3DSA:3.40.630.30 119 317 2.4E-65 T 14-10-2018 JV59_24625 e53f27cec2b01dc0a5357c7d95c239a9 117 Gene3D G3DSA:3.10.180.10 1 116 8.9E-14 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_24625 e53f27cec2b01dc0a5357c7d95c239a9 117 SUPERFAMILY SSF54593 1 112 1.65E-20 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_39565 84dd203bab827072f5b649da651662cd 255 Gene3D G3DSA:1.10.10.10 1 98 1.5E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_39565 84dd203bab827072f5b649da651662cd 255 Pfam PF00486 Transcriptional regulatory protein, C terminal 18 90 3.1E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_39565 84dd203bab827072f5b649da651662cd 255 SUPERFAMILY SSF46894 6 91 2.1E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_39565 84dd203bab827072f5b649da651662cd 255 SMART SM00862 15 90 5.0E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_35030 46edeb597b62104d34344ec36746cb56 758 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 156 7.2E-12 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JV59_35030 46edeb597b62104d34344ec36746cb56 758 Gene3D G3DSA:3.40.50.300 3 192 1.4E-43 T 14-10-2018 JV59_35030 46edeb597b62104d34344ec36746cb56 758 Pfam PF07664 Ferrous iron transport protein B C terminus 453 505 5.3E-19 T 14-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 JV59_35030 46edeb597b62104d34344ec36746cb56 758 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 687 2.5E-183 T 14-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 JV59_35030 46edeb597b62104d34344ec36746cb56 758 Pfam PF02421 Ferrous iron transport protein B 4 161 9.4E-58 T 14-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 JV59_35030 46edeb597b62104d34344ec36746cb56 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 53 68 3.6E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JV59_35030 46edeb597b62104d34344ec36746cb56 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.6E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JV59_35030 46edeb597b62104d34344ec36746cb56 758 SUPERFAMILY SSF52540 4 178 1.78E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_35030 46edeb597b62104d34344ec36746cb56 758 Pfam PF07670 Nucleoside recognition 350 441 1.4E-13 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 JV59_35030 46edeb597b62104d34344ec36746cb56 758 Pfam PF07670 Nucleoside recognition 510 691 3.9E-37 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 JV59_01625 4009c22da8a6afb064f57c9c828af923 573 SUPERFAMILY SSF48208 80 564 1.19E-87 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 JV59_01625 4009c22da8a6afb064f57c9c828af923 573 Gene3D G3DSA:1.50.10.10 94 573 2.3E-223 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 JV59_01625 4009c22da8a6afb064f57c9c828af923 573 Pfam PF02927 Cellulase N-terminal ig-like domain 5 84 3.9E-9 T 14-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 JV59_01625 4009c22da8a6afb064f57c9c828af923 573 Pfam PF00759 Glycosyl hydrolase family 9 97 504 5.6E-25 T 14-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 JV59_01625 4009c22da8a6afb064f57c9c828af923 573 SUPERFAMILY SSF81296 2 90 1.82E-13 T 14-10-2018 IPR014756 Immunoglobulin E-set JV59_01625 4009c22da8a6afb064f57c9c828af923 573 Gene3D G3DSA:2.60.40.10 1 93 1.7E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_34650 c2269f78f24d04877465eaf14d5c0685 314 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 275 9.5E-26 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 JV59_25280 ed8321329a6db411edcbebef3a9131f6 94 SUPERFAMILY SSF53474 6 87 1.0E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_25280 ed8321329a6db411edcbebef3a9131f6 94 Gene3D G3DSA:3.40.50.1820 1 91 4.5E-15 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_19670 3882acff29341f2b72dfcb18041b59dc 200 SUPERFAMILY SSF56925 62 141 7.06E-6 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JV59_26760 ae280a0b277a32f9a6182004d389ecd9 220 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 3 217 8.7E-72 T 14-10-2018 IPR012807 Anti-sigma factor ChrR, putative JV59_26760 ae280a0b277a32f9a6182004d389ecd9 220 Pfam PF12973 ChrR Cupin-like domain 128 194 9.8E-15 T 14-10-2018 IPR025979 ChrR-like cupin domain JV59_26760 ae280a0b277a32f9a6182004d389ecd9 220 SUPERFAMILY SSF51182 110 204 2.1E-13 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JV59_26760 ae280a0b277a32f9a6182004d389ecd9 220 Gene3D G3DSA:1.10.10.1320 1 104 8.7E-15 T 14-10-2018 JV59_26760 ae280a0b277a32f9a6182004d389ecd9 220 Gene3D G3DSA:2.60.120.10 108 198 5.8E-24 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_33935 da5dde15e14545595ecb580f6eb70cf0 173 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 9 170 22.124 T 14-10-2018 IPR022920 Disulphide bond formation protein DsbB JV59_33935 da5dde15e14545595ecb580f6eb70cf0 173 Pfam PF02600 Disulfide bond formation protein DsbB 14 162 2.1E-43 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 JV59_33935 da5dde15e14545595ecb580f6eb70cf0 173 SUPERFAMILY SSF158442 17 163 4.71E-45 T 14-10-2018 IPR023380 DsbB-like superfamily JV59_33935 da5dde15e14545595ecb580f6eb70cf0 173 Gene3D G3DSA:1.20.1550.10 3 173 8.6E-58 T 14-10-2018 IPR023380 DsbB-like superfamily JV59_19620 d69e2d348a8eb0e8b08557f9cb330019 351 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 259 5.6E-10 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JV59_19620 d69e2d348a8eb0e8b08557f9cb330019 351 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 347 6.6E-52 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 JV59_19620 d69e2d348a8eb0e8b08557f9cb330019 351 Gene3D G3DSA:1.10.287.470 91 149 1.6E-59 T 14-10-2018 JV59_19620 d69e2d348a8eb0e8b08557f9cb330019 351 Gene3D G3DSA:2.40.50.100 57 189 1.6E-59 T 14-10-2018 JV59_19620 d69e2d348a8eb0e8b08557f9cb330019 351 SUPERFAMILY SSF111369 47 265 1.31E-27 T 14-10-2018 JV59_19620 d69e2d348a8eb0e8b08557f9cb330019 351 Gene3D G3DSA:2.40.420.20 270 346 1.6E-59 T 14-10-2018 JV59_19620 d69e2d348a8eb0e8b08557f9cb330019 351 Gene3D G3DSA:2.40.30.170 43 269 1.6E-59 T 14-10-2018 JV59_32900 f348271c12ad35ac61920a72ce1137c6 212 SMART SM00421 148 205 6.9E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_32900 f348271c12ad35ac61920a72ce1137c6 212 SUPERFAMILY SSF46894 140 211 2.62E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_32900 f348271c12ad35ac61920a72ce1137c6 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 1.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_32900 f348271c12ad35ac61920a72ce1137c6 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 1.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_32900 f348271c12ad35ac61920a72ce1137c6 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 1.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_32900 f348271c12ad35ac61920a72ce1137c6 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_32900 f348271c12ad35ac61920a72ce1137c6 212 Pfam PF00072 Response regulator receiver domain 7 119 7.0E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_32900 f348271c12ad35ac61920a72ce1137c6 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 2.2E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_32900 f348271c12ad35ac61920a72ce1137c6 212 SMART SM00448 5 118 1.1E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_32900 f348271c12ad35ac61920a72ce1137c6 212 SUPERFAMILY SSF52172 4 136 5.83E-35 T 14-10-2018 IPR011006 CheY-like superfamily JV59_32900 f348271c12ad35ac61920a72ce1137c6 212 Gene3D G3DSA:3.40.50.12740 5 211 1.7E-66 T 14-10-2018 JV59_18930 64670b2a566a7a6897424c0b42534d0f 324 Gene3D G3DSA:3.40.50.2300 132 318 1.3E-112 T 14-10-2018 JV59_18930 64670b2a566a7a6897424c0b42534d0f 324 Gene3D G3DSA:3.40.50.2300 25 294 1.3E-112 T 14-10-2018 JV59_18930 64670b2a566a7a6897424c0b42534d0f 324 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 24 294 1.1E-29 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain JV59_18930 64670b2a566a7a6897424c0b42534d0f 324 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 24 322 1.8E-135 T 14-10-2018 IPR014301 TMAO reductase system, periplasmic protein TorT JV59_18930 64670b2a566a7a6897424c0b42534d0f 324 SUPERFAMILY SSF53822 23 288 7.81E-36 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_18660 5153b54f020209ba8e0a001a8c5ae3ac 466 Gene3D G3DSA:1.10.3080.10 29 465 3.7E-142 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 JV59_18660 5153b54f020209ba8e0a001a8c5ae3ac 466 PRINTS PR00762 Chloride channel signature 181 200 1.9E-29 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 JV59_18660 5153b54f020209ba8e0a001a8c5ae3ac 466 PRINTS PR00762 Chloride channel signature 385 401 1.9E-29 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 JV59_18660 5153b54f020209ba8e0a001a8c5ae3ac 466 PRINTS PR00762 Chloride channel signature 100 117 1.9E-29 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 JV59_18660 5153b54f020209ba8e0a001a8c5ae3ac 466 PRINTS PR00762 Chloride channel signature 350 370 1.9E-29 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 JV59_18660 5153b54f020209ba8e0a001a8c5ae3ac 466 PRINTS PR00762 Chloride channel signature 403 422 1.9E-29 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 JV59_18660 5153b54f020209ba8e0a001a8c5ae3ac 466 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 1 465 48.832 T 14-10-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 JV59_18660 5153b54f020209ba8e0a001a8c5ae3ac 466 Pfam PF00654 Voltage gated chloride channel 88 435 1.3E-94 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 JV59_18660 5153b54f020209ba8e0a001a8c5ae3ac 466 SUPERFAMILY SSF81340 27 451 5.1E-115 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 JV59_21800 631ea3c8b3a00581d4ff7b45eb579cd8 244 Pfam PF13432 Tetratricopeptide repeat 30 81 0.0042 T 14-10-2018 JV59_21800 631ea3c8b3a00581d4ff7b45eb579cd8 244 Pfam PF13432 Tetratricopeptide repeat 98 158 5.0E-7 T 14-10-2018 JV59_21800 631ea3c8b3a00581d4ff7b45eb579cd8 244 SMART SM00028 126 159 5.9E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_21800 631ea3c8b3a00581d4ff7b45eb579cd8 244 SMART SM00028 59 92 11.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_21800 631ea3c8b3a00581d4ff7b45eb579cd8 244 SUPERFAMILY SSF48452 29 175 1.25E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_21800 631ea3c8b3a00581d4ff7b45eb579cd8 244 Gene3D G3DSA:1.25.40.10 97 242 6.3E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_21800 631ea3c8b3a00581d4ff7b45eb579cd8 244 Gene3D G3DSA:1.25.40.10 21 96 1.5E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_35045 52fc1bf0a5c867d4667f6bb8b869ba18 292 PRINTS PR00690 Adhesin family signature 179 200 4.1E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 JV59_35045 52fc1bf0a5c867d4667f6bb8b869ba18 292 PRINTS PR00690 Adhesin family signature 232 250 4.1E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 JV59_35045 52fc1bf0a5c867d4667f6bb8b869ba18 292 PRINTS PR00690 Adhesin family signature 62 79 4.1E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 JV59_35045 52fc1bf0a5c867d4667f6bb8b869ba18 292 PRINTS PR00690 Adhesin family signature 49 62 4.1E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 JV59_35045 52fc1bf0a5c867d4667f6bb8b869ba18 292 Pfam PF01297 Zinc-uptake complex component A periplasmic 21 289 2.5E-57 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 JV59_35045 52fc1bf0a5c867d4667f6bb8b869ba18 292 Gene3D G3DSA:3.40.50.1980 21 179 1.7E-46 T 14-10-2018 JV59_35045 52fc1bf0a5c867d4667f6bb8b869ba18 292 PRINTS PR00691 Adhesin B signature 43 61 3.3E-5 T 14-10-2018 IPR006129 Adhesin B GO:0007155 JV59_35045 52fc1bf0a5c867d4667f6bb8b869ba18 292 PRINTS PR00691 Adhesin B signature 62 81 3.3E-5 T 14-10-2018 IPR006129 Adhesin B GO:0007155 JV59_35045 52fc1bf0a5c867d4667f6bb8b869ba18 292 PRINTS PR00691 Adhesin B signature 123 142 3.3E-5 T 14-10-2018 IPR006129 Adhesin B GO:0007155 JV59_35045 52fc1bf0a5c867d4667f6bb8b869ba18 292 SUPERFAMILY SSF53807 20 290 3.88E-76 T 14-10-2018 JV59_35045 52fc1bf0a5c867d4667f6bb8b869ba18 292 Gene3D G3DSA:3.40.50.1980 180 292 9.7E-40 T 14-10-2018 JV59_33395 855b46cd686ead3210b11196916ab67e 159 Pfam PF13505 Outer membrane protein beta-barrel domain 15 140 2.3E-9 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel JV59_33395 855b46cd686ead3210b11196916ab67e 159 SUPERFAMILY SSF56925 21 159 8.37E-13 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JV59_33395 855b46cd686ead3210b11196916ab67e 159 Gene3D G3DSA:2.40.160.20 20 159 9.7E-17 T 14-10-2018 JV59_36300 542c6b692571bce18bec3039a4d02b02 333 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 251 293 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JV59_36300 542c6b692571bce18bec3039a4d02b02 333 SUPERFAMILY SSF46689 198 248 1.48E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_36300 542c6b692571bce18bec3039a4d02b02 333 Pfam PF12833 Helix-turn-helix domain 221 298 2.1E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_36300 542c6b692571bce18bec3039a4d02b02 333 SUPERFAMILY SSF46689 250 298 1.43E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_36300 542c6b692571bce18bec3039a4d02b02 333 SMART SM00342 214 297 1.1E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_36300 542c6b692571bce18bec3039a4d02b02 333 Gene3D G3DSA:1.10.10.60 248 302 5.3E-17 T 14-10-2018 JV59_36300 542c6b692571bce18bec3039a4d02b02 333 Gene3D G3DSA:1.10.10.60 196 247 6.8E-11 T 14-10-2018 JV59_24735 e9ff48877d2ce0e98d33adeae0e99bb8 209 SUPERFAMILY SSF52833 1 69 1.24E-13 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_24735 e9ff48877d2ce0e98d33adeae0e99bb8 209 SUPERFAMILY SSF47616 77 208 5.51E-37 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily JV59_24735 e9ff48877d2ce0e98d33adeae0e99bb8 209 Pfam PF04399 Glutaredoxin 2, C terminal domain 85 208 8.9E-33 T 14-10-2018 IPR007494 Glutaredoxin 2, C-terminal JV59_24735 e9ff48877d2ce0e98d33adeae0e99bb8 209 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 74 2.8E-10 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 JV59_24735 e9ff48877d2ce0e98d33adeae0e99bb8 209 Gene3D G3DSA:1.20.1050.10 92 209 3.9E-23 T 14-10-2018 JV59_24735 e9ff48877d2ce0e98d33adeae0e99bb8 209 Gene3D G3DSA:3.40.30.10 8 85 6.1E-23 T 14-10-2018 JV59_24735 e9ff48877d2ce0e98d33adeae0e99bb8 209 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 208 1.5E-75 T 14-10-2018 IPR011901 Glutaredoxin-2 GO:0005829|GO:0097573 JV59_00280 f452ed5897fbe2e8bb65ca6a56fe3e67 318 SUPERFAMILY SSF64182 4 317 8.55E-43 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily JV59_30040 b48106d06dc2d85bb18de073b0efdb2c 786 Gene3D G3DSA:3.60.21.10 128 329 8.7E-6 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JV59_30040 b48106d06dc2d85bb18de073b0efdb2c 786 SUPERFAMILY SSF56300 124 391 7.59E-19 T 14-10-2018 JV59_30040 b48106d06dc2d85bb18de073b0efdb2c 786 SUPERFAMILY SSF49363 6 117 7.85E-12 T 14-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 JV59_30040 b48106d06dc2d85bb18de073b0efdb2c 786 Pfam PF00149 Calcineurin-like phosphoesterase 143 321 1.5E-6 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 JV59_26960 d696b8ddaec2b528c967f3161a9b29b9 246 Pfam PF00929 Exonuclease 13 180 5.9E-38 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III JV59_26960 d696b8ddaec2b528c967f3161a9b29b9 246 Gene3D G3DSA:3.30.420.10 4 193 1.2E-58 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JV59_26960 d696b8ddaec2b528c967f3161a9b29b9 246 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 10 229 3.9E-81 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_26960 d696b8ddaec2b528c967f3161a9b29b9 246 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 246 1.7E-99 T 14-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_26960 d696b8ddaec2b528c967f3161a9b29b9 246 SMART SM00479 11 189 8.0E-53 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III JV59_26960 d696b8ddaec2b528c967f3161a9b29b9 246 SUPERFAMILY SSF53098 8 191 2.56E-54 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JV59_38295 1320095de50da51d3b19cfc00baee27a 220 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 17 214 3.8E-51 T 14-10-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB JV59_38295 1320095de50da51d3b19cfc00baee27a 220 Gene3D G3DSA:2.40.360.10 20 219 9.5E-58 T 14-10-2018 IPR023373 YmcC-like superfamily JV59_38295 1320095de50da51d3b19cfc00baee27a 220 SUPERFAMILY SSF159270 22 219 1.83E-57 T 14-10-2018 IPR023373 YmcC-like superfamily JV59_00725 c8ea8c0191ad247ea9438f65aab2622a 257 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 2 22 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_00725 c8ea8c0191ad247ea9438f65aab2622a 257 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 23 2.4E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_00725 c8ea8c0191ad247ea9438f65aab2622a 257 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 2 23 9.1E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_38595 a7139cb27f789f38c8d6815d0d65e6e2 339 SUPERFAMILY SSF53756 30 336 3.96E-44 T 14-10-2018 JV59_38595 a7139cb27f789f38c8d6815d0d65e6e2 339 Gene3D G3DSA:3.40.50.2000 23 179 6.1E-18 T 14-10-2018 JV59_38595 a7139cb27f789f38c8d6815d0d65e6e2 339 Gene3D G3DSA:3.40.50.2000 185 337 2.9E-15 T 14-10-2018 JV59_38595 a7139cb27f789f38c8d6815d0d65e6e2 339 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 103 322 1.7E-15 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 JV59_37265 ec4fa48ca1b6bdef26de7d6902ebf2a0 154 Hamap MF_01114 Regulatory protein RecX [recX]. 6 152 14.168 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 JV59_37265 ec4fa48ca1b6bdef26de7d6902ebf2a0 154 Pfam PF02631 RecX family 33 150 6.4E-31 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 JV59_37265 ec4fa48ca1b6bdef26de7d6902ebf2a0 154 Gene3D G3DSA:1.10.10.10 10 49 1.1E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_37265 ec4fa48ca1b6bdef26de7d6902ebf2a0 154 Gene3D G3DSA:1.10.10.10 103 151 2.3E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_37265 ec4fa48ca1b6bdef26de7d6902ebf2a0 154 Gene3D G3DSA:1.10.10.10 57 100 5.5E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_01020 be6c4c85ae5e588eda4ecab1dbeb7dc5 187 SUPERFAMILY SSF143456 1 187 3.27E-65 T 14-10-2018 JV59_01020 be6c4c85ae5e588eda4ecab1dbeb7dc5 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 2.4E-49 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 JV59_01020 be6c4c85ae5e588eda4ecab1dbeb7dc5 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 38.927 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 JV59_01020 be6c4c85ae5e588eda4ecab1dbeb7dc5 187 Gene3D G3DSA:3.40.1740.10 1 187 4.5E-68 T 14-10-2018 JV59_37080 70616f3fbfc8dd31b78b07afe790620c 176 SMART SM00014 61 170 2.4E-16 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JV59_37080 70616f3fbfc8dd31b78b07afe790620c 176 SUPERFAMILY SSF48317 7 172 9.55E-37 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily JV59_37080 70616f3fbfc8dd31b78b07afe790620c 176 Gene3D G3DSA:1.20.144.10 89 174 4.5E-20 T 14-10-2018 JV59_37080 70616f3fbfc8dd31b78b07afe790620c 176 Pfam PF01569 PAP2 superfamily 61 172 2.0E-20 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JV59_30875 06c3b6ced93a488b3cba3aba865f6f60 530 Gene3D G3DSA:3.40.50.300 282 528 3.4E-50 T 14-10-2018 JV59_30875 06c3b6ced93a488b3cba3aba865f6f60 530 Pfam PF00005 ABC transporter 18 184 2.6E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_30875 06c3b6ced93a488b3cba3aba865f6f60 530 SMART SM00382 26 238 3.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_30875 06c3b6ced93a488b3cba3aba865f6f60 530 SMART SM00382 343 511 3.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_30875 06c3b6ced93a488b3cba3aba865f6f60 530 Gene3D G3DSA:3.40.50.300 2 281 4.9E-57 T 14-10-2018 JV59_30875 06c3b6ced93a488b3cba3aba865f6f60 530 SUPERFAMILY SSF52540 299 520 4.46E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_30875 06c3b6ced93a488b3cba3aba865f6f60 530 Pfam PF00005 ABC transporter 337 466 1.4E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_30875 06c3b6ced93a488b3cba3aba865f6f60 530 Pfam PF12848 ABC transporter 224 309 7.2E-22 T 14-10-2018 IPR032781 ABC-transporter extension domain JV59_30875 06c3b6ced93a488b3cba3aba865f6f60 530 SUPERFAMILY SSF52540 3 239 7.76E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_33650 4c9eb9c71b361d3cd8362c033931176d 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.7E-29 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 JV59_33650 4c9eb9c71b361d3cd8362c033931176d 284 Gene3D G3DSA:3.40.50.10490 94 276 2.8E-39 T 14-10-2018 JV59_33650 4c9eb9c71b361d3cd8362c033931176d 284 SUPERFAMILY SSF53697 93 278 1.19E-39 T 14-10-2018 JV59_33650 4c9eb9c71b361d3cd8362c033931176d 284 Pfam PF01380 SIS domain 124 252 2.5E-24 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 JV59_33650 4c9eb9c71b361d3cd8362c033931176d 284 SUPERFAMILY SSF46689 1 80 1.58E-21 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_33650 4c9eb9c71b361d3cd8362c033931176d 284 Gene3D G3DSA:1.10.10.10 1 79 2.3E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_18940 0335d99e7ab610a72d468f599c2be83b 174 Gene3D G3DSA:3.40.630.30 1 172 4.7E-36 T 14-10-2018 JV59_18940 0335d99e7ab610a72d468f599c2be83b 174 SUPERFAMILY SSF55729 1 171 5.23E-37 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_18940 0335d99e7ab610a72d468f599c2be83b 174 Pfam PF13302 Acetyltransferase (GNAT) domain 8 149 6.8E-24 T 14-10-2018 IPR000182 GNAT domain JV59_36875 f7a013b4b34a27fff33da5907552536e 405 Pfam PF01743 Poly A polymerase head domain 3 122 4.0E-17 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 JV59_36875 f7a013b4b34a27fff33da5907552536e 405 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 42.63 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 JV59_36875 f7a013b4b34a27fff33da5907552536e 405 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 405 51.228 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 JV59_36875 f7a013b4b34a27fff33da5907552536e 405 SUPERFAMILY SSF81301 2 119 1.96E-29 T 14-10-2018 JV59_36875 f7a013b4b34a27fff33da5907552536e 405 Gene3D G3DSA:1.10.3090.10 122 403 6.4E-48 T 14-10-2018 JV59_36875 f7a013b4b34a27fff33da5907552536e 405 Pfam PF01966 HD domain 230 313 2.2E-6 T 14-10-2018 IPR006674 HD domain JV59_36875 f7a013b4b34a27fff33da5907552536e 405 Gene3D G3DSA:3.30.460.10 1 121 1.1E-26 T 14-10-2018 JV59_36875 f7a013b4b34a27fff33da5907552536e 405 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 4.6E-14 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 JV59_36875 f7a013b4b34a27fff33da5907552536e 405 SUPERFAMILY SSF81891 120 400 1.05E-54 T 14-10-2018 JV59_36875 f7a013b4b34a27fff33da5907552536e 405 PIRSF PIRSF000813 1 405 4.8E-197 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 JV59_36590 62cda5c1416bb0442320c0e76e92a77f 558 Gene3D G3DSA:3.30.565.10 419 556 9.0E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_36590 62cda5c1416bb0442320c0e76e92a77f 558 SUPERFAMILY SSF55874 420 553 5.23E-10 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_36590 62cda5c1416bb0442320c0e76e92a77f 558 SUPERFAMILY SSF55781 228 351 1.1E-7 T 14-10-2018 JV59_36590 62cda5c1416bb0442320c0e76e92a77f 558 Pfam PF06580 Histidine kinase 366 444 1.2E-26 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 JV59_36590 62cda5c1416bb0442320c0e76e92a77f 558 Gene3D G3DSA:3.30.450.40 226 352 1.9E-6 T 14-10-2018 IPR029016 GAF-like domain superfamily JV59_36590 62cda5c1416bb0442320c0e76e92a77f 558 Pfam PF07694 5TMR of 5TMR-LYT 25 194 1.6E-60 T 14-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 JV59_40195 e17f02837772dc7ebca8229803aca496 126 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 12 116 1.0E-49 T 14-10-2018 IPR009867 Protein of unknown function DUF1422 JV59_40195 e17f02837772dc7ebca8229803aca496 126 Pfam PF07226 Protein of unknown function (DUF1422) 10 120 6.8E-49 T 14-10-2018 IPR009867 Protein of unknown function DUF1422 JV59_20855 1317ed945a64d0427f83e3258a1d96dd 409 Gene3D G3DSA:3.40.640.10 38 299 1.4E-165 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_20855 1317ed945a64d0427f83e3258a1d96dd 409 PIRSF PIRSF005572 24 409 2.7E-55 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 JV59_20855 1317ed945a64d0427f83e3258a1d96dd 409 Pfam PF00266 Aminotransferase class-V 27 397 3.0E-149 T 14-10-2018 IPR000192 Aminotransferase class V domain JV59_20855 1317ed945a64d0427f83e3258a1d96dd 409 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 219 238 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site JV59_20855 1317ed945a64d0427f83e3258a1d96dd 409 Gene3D G3DSA:3.90.1150.10 11 401 1.4E-165 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_20855 1317ed945a64d0427f83e3258a1d96dd 409 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 11 408 6.6E-170 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 JV59_20855 1317ed945a64d0427f83e3258a1d96dd 409 SUPERFAMILY SSF53383 9 405 7.79E-131 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_08455 864cc2c754f997f08590730df4b022eb 170 PIRSF PIRSF036893 1 170 4.8E-41 T 14-10-2018 IPR022271 Lipocalin, ApoD type JV59_08455 864cc2c754f997f08590730df4b022eb 170 SUPERFAMILY SSF50814 4 170 8.11E-49 T 14-10-2018 IPR012674 Calycin JV59_08455 864cc2c754f997f08590730df4b022eb 170 Pfam PF08212 Lipocalin-like domain 29 169 1.6E-39 T 14-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain JV59_08455 864cc2c754f997f08590730df4b022eb 170 Gene3D G3DSA:2.40.128.20 9 170 3.9E-49 T 14-10-2018 IPR012674 Calycin JV59_08455 864cc2c754f997f08590730df4b022eb 170 ProSitePatterns PS00213 Lipocalin signature. 28 41 - T 14-10-2018 IPR022272 Lipocalin family conserved site JV59_08455 864cc2c754f997f08590730df4b022eb 170 PRINTS PR01171 Bacterial lipocalin signature 132 143 2.8E-35 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 JV59_08455 864cc2c754f997f08590730df4b022eb 170 PRINTS PR01171 Bacterial lipocalin signature 29 43 2.8E-35 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 JV59_08455 864cc2c754f997f08590730df4b022eb 170 PRINTS PR01171 Bacterial lipocalin signature 65 74 2.8E-35 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 JV59_08455 864cc2c754f997f08590730df4b022eb 170 PRINTS PR01171 Bacterial lipocalin signature 159 169 2.8E-35 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 JV59_08455 864cc2c754f997f08590730df4b022eb 170 PRINTS PR01171 Bacterial lipocalin signature 46 62 2.8E-35 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 JV59_08455 864cc2c754f997f08590730df4b022eb 170 PRINTS PR01171 Bacterial lipocalin signature 99 113 2.8E-35 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 JV59_38140 be296202a5b4241eaf8afbfdb5619350 575 Gene3D G3DSA:1.20.1730.10 348 550 3.6E-26 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily JV59_38140 be296202a5b4241eaf8afbfdb5619350 575 Gene3D G3DSA:1.20.1730.10 21 330 4.0E-35 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily JV59_38140 be296202a5b4241eaf8afbfdb5619350 575 Pfam PF00474 Sodium:solute symporter family 376 491 4.2E-16 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 JV59_38140 be296202a5b4241eaf8afbfdb5619350 575 Pfam PF00474 Sodium:solute symporter family 33 296 5.7E-36 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 JV59_38140 be296202a5b4241eaf8afbfdb5619350 575 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 7 566 4.3E-259 T 14-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily JV59_34880 6b9c690b3cbebee5dea4505bc3885750 242 Pfam PF11859 Protein of unknown function (DUF3379) 1 236 2.0E-84 T 14-10-2018 IPR021806 Protein of unknown function DUF3379 JV59_23210 06c2e6981a44787f85fab8815de9d749 564 SMART SM00448 1 115 8.4E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_23210 06c2e6981a44787f85fab8815de9d749 564 Pfam PF13581 Histidine kinase-like ATPase domain 414 550 1.2E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_23210 06c2e6981a44787f85fab8815de9d749 564 Gene3D G3DSA:3.60.40.10 163 391 5.4E-38 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JV59_23210 06c2e6981a44787f85fab8815de9d749 564 Pfam PF00072 Response regulator receiver domain 3 115 8.0E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_23210 06c2e6981a44787f85fab8815de9d749 564 Gene3D G3DSA:3.40.50.12740 1 162 2.3E-32 T 14-10-2018 JV59_23210 06c2e6981a44787f85fab8815de9d749 564 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 192 378 1.7E-35 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JV59_23210 06c2e6981a44787f85fab8815de9d749 564 Gene3D G3DSA:3.30.565.10 399 560 1.6E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_23210 06c2e6981a44787f85fab8815de9d749 564 SMART SM00331 180 378 3.1E-10 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JV59_23210 06c2e6981a44787f85fab8815de9d749 564 SUPERFAMILY SSF52172 1 144 7.12E-31 T 14-10-2018 IPR011006 CheY-like superfamily JV59_32150 97dc701c664e0730bfecf8a71bf60e76 256 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 9 246 3.3E-32 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 JV59_32150 97dc701c664e0730bfecf8a71bf60e76 256 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 256 46.467 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 JV59_32150 97dc701c664e0730bfecf8a71bf60e76 256 Pfam PF02654 Cobalamin-5-phosphate synthase 14 247 5.7E-52 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 JV59_13905 cf5c646dbb3818ecad9c47f70ec5beeb 650 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 646 52.747 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 JV59_13905 cf5c646dbb3818ecad9c47f70ec5beeb 650 SUPERFAMILY SSF56801 11 644 2.88E-181 T 14-10-2018 JV59_13905 cf5c646dbb3818ecad9c47f70ec5beeb 650 Pfam PF13193 AMP-binding enzyme C-terminal domain 532 610 4.9E-26 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JV59_13905 cf5c646dbb3818ecad9c47f70ec5beeb 650 Gene3D G3DSA:3.30.300.30 519 650 2.4E-31 T 14-10-2018 JV59_13905 cf5c646dbb3818ecad9c47f70ec5beeb 650 Pfam PF00501 AMP-binding enzyme 84 523 5.0E-90 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JV59_13905 cf5c646dbb3818ecad9c47f70ec5beeb 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 14-10-2018 IPR020845 AMP-binding, conserved site JV59_13905 cf5c646dbb3818ecad9c47f70ec5beeb 650 Gene3D G3DSA:3.40.50.12780 50 516 1.9E-102 T 14-10-2018 JV59_13905 cf5c646dbb3818ecad9c47f70ec5beeb 650 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 644 0.0 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 JV59_13905 cf5c646dbb3818ecad9c47f70ec5beeb 650 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 2.3E-20 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 JV59_30290 50a125499a190e94fbccff6840330155 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 14-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JV59_30290 50a125499a190e94fbccff6840330155 377 Pfam PF00268 Ribonucleotide reductase, small chain 34 333 3.6E-49 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JV59_30290 50a125499a190e94fbccff6840330155 377 Gene3D G3DSA:1.10.620.20 2 341 8.0E-146 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 JV59_30290 50a125499a190e94fbccff6840330155 377 SUPERFAMILY SSF47240 3 341 3.86E-113 T 14-10-2018 IPR009078 Ferritin-like superfamily JV59_25155 f23950eadb957e40b404242b871f1424 863 SUPERFAMILY SSF52540 434 750 1.27E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_25155 f23950eadb957e40b404242b871f1424 863 Gene3D G3DSA:3.40.50.300 445 751 2.5E-35 T 14-10-2018 JV59_25155 f23950eadb957e40b404242b871f1424 863 Gene3D G3DSA:1.10.8.730 521 646 2.5E-35 T 14-10-2018 JV59_25155 f23950eadb957e40b404242b871f1424 863 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 31 840 1.6E-256 T 14-10-2018 IPR014117 Type-IV secretion system protein TraC JV59_25155 f23950eadb957e40b404242b871f1424 863 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 28 236 2.3E-36 T 14-10-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase JV59_33040 cadd89b4105b34b63ac4cca009eff13a 180 Pfam PF07700 Haem-NO-binding 2 161 1.2E-38 T 14-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 JV59_33040 cadd89b4105b34b63ac4cca009eff13a 180 SUPERFAMILY SSF111126 1 177 1.94E-47 T 14-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily JV59_33040 cadd89b4105b34b63ac4cca009eff13a 180 Gene3D G3DSA:3.90.1520.10 1 179 2.0E-55 T 14-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 JV59_01155 0e5b42c6aa5419d9bac4126600060c39 323 Gene3D G3DSA:1.10.600.10 1 323 3.4E-122 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily JV59_01155 0e5b42c6aa5419d9bac4126600060c39 323 Pfam PF00348 Polyprenyl synthetase 32 274 1.2E-75 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 JV59_01155 0e5b42c6aa5419d9bac4126600060c39 323 SUPERFAMILY SSF48576 4 322 2.24E-101 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily JV59_01155 0e5b42c6aa5419d9bac4126600060c39 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site JV59_01155 0e5b42c6aa5419d9bac4126600060c39 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site JV59_27655 7c40279070f31cba13005f19b07d08b2 265 SMART SM00858 141 202 1.4E-5 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 JV59_27655 7c40279070f31cba13005f19b07d08b2 265 Gene3D G3DSA:3.90.1210.10 140 205 2.8E-6 T 14-10-2018 JV59_27655 7c40279070f31cba13005f19b07d08b2 265 Gene3D G3DSA:2.30.30.760 206 265 3.2E-11 T 14-10-2018 JV59_27655 7c40279070f31cba13005f19b07d08b2 265 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 129 264 5.7E-37 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal JV59_27655 7c40279070f31cba13005f19b07d08b2 265 Pfam PF13144 Chaperone for flagella basal body P-ring formation 63 262 1.5E-40 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal JV59_34045 8cb31d4bc74c5f817c21431f10a9f676 627 SMART SM00304 296 350 5.0E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_34045 8cb31d4bc74c5f817c21431f10a9f676 627 SMART SM00283 365 626 1.3E-72 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_34045 8cb31d4bc74c5f817c21431f10a9f676 627 Pfam PF02743 Cache domain 42 257 1.4E-19 T 14-10-2018 IPR033479 Double Cache domain 1 JV59_34045 8cb31d4bc74c5f817c21431f10a9f676 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 437 593 4.0E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_34045 8cb31d4bc74c5f817c21431f10a9f676 627 Gene3D G3DSA:1.10.287.950 297 627 6.7E-73 T 14-10-2018 JV59_34045 8cb31d4bc74c5f817c21431f10a9f676 627 Pfam PF00672 HAMP domain 300 345 3.2E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_34045 8cb31d4bc74c5f817c21431f10a9f676 627 SUPERFAMILY SSF58104 318 627 1.44E-76 T 14-10-2018 JV59_34045 8cb31d4bc74c5f817c21431f10a9f676 627 Gene3D G3DSA:3.30.450.20 66 171 3.4E-24 T 14-10-2018 JV59_34045 8cb31d4bc74c5f817c21431f10a9f676 627 Gene3D G3DSA:3.30.450.20 53 269 3.4E-24 T 14-10-2018 JV59_30635 3f2ff8c2a7235070d068d0e5c2a93637 259 Pfam PF05630 Necrosis inducing protein (NPP1) 35 240 5.9E-42 T 14-10-2018 IPR008701 Necrosis inducing protein JV59_30635 3f2ff8c2a7235070d068d0e5c2a93637 259 PIRSF PIRSF029958 1 257 6.0E-86 T 14-10-2018 IPR008701 Necrosis inducing protein JV59_21935 58215be5f5c0a29eb25aeccd45e1df91 235 Gene3D G3DSA:3.40.50.150 24 234 5.2E-41 T 14-10-2018 JV59_21935 58215be5f5c0a29eb25aeccd45e1df91 235 Pfam PF08241 Methyltransferase domain 43 138 9.7E-19 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 JV59_21935 58215be5f5c0a29eb25aeccd45e1df91 235 SUPERFAMILY SSF53335 3 232 7.37E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_26610 bd9fcfe10e8b4c522c28ef471a081ff4 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 3.4E-38 T 14-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 JV59_26610 bd9fcfe10e8b4c522c28ef471a081ff4 98 SUPERFAMILY SSF75471 1 93 1.57E-29 T 14-10-2018 IPR035920 YhbY-like superfamily JV59_26610 bd9fcfe10e8b4c522c28ef471a081ff4 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 2.0E-41 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 JV59_26610 bd9fcfe10e8b4c522c28ef471a081ff4 98 SMART SM01103 3 86 3.3E-41 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 JV59_26610 bd9fcfe10e8b4c522c28ef471a081ff4 98 Gene3D G3DSA:3.30.110.60 1 98 1.1E-36 T 14-10-2018 IPR035920 YhbY-like superfamily JV59_26610 bd9fcfe10e8b4c522c28ef471a081ff4 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 4.5E-21 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 JV59_37875 5adbf7a431f807dee16844c29ff2cbde 136 SUPERFAMILY SSF54686 3 133 2.88E-53 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 JV59_37875 5adbf7a431f807dee16844c29ff2cbde 136 Gene3D G3DSA:3.90.1170.10 1 136 4.7E-54 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 JV59_37875 5adbf7a431f807dee16844c29ff2cbde 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.413 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37875 5adbf7a431f807dee16844c29ff2cbde 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 3.4E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37875 5adbf7a431f807dee16844c29ff2cbde 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 3.4E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37875 5adbf7a431f807dee16844c29ff2cbde 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 3.4E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37875 5adbf7a431f807dee16844c29ff2cbde 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 3.4E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37875 5adbf7a431f807dee16844c29ff2cbde 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_37875 5adbf7a431f807dee16844c29ff2cbde 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 5.5E-47 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 JV59_37875 5adbf7a431f807dee16844c29ff2cbde 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 125 4.2E-57 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_23950 28cb952d6bc97fc56ee6df71252b94fa 234 Gene3D G3DSA:3.20.20.190 1 234 4.1E-73 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 JV59_23950 28cb952d6bc97fc56ee6df71252b94fa 234 SUPERFAMILY SSF51695 2 232 2.04E-66 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 JV59_23950 28cb952d6bc97fc56ee6df71252b94fa 234 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 5 232 7.2E-37 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 JV59_31210 ac180082ecd1ae1505cb6efabf7a2a95 263 SUPERFAMILY SSF116927 121 260 7.85E-29 T 14-10-2018 IPR035074 EspA/CesA-like JV59_31210 ac180082ecd1ae1505cb6efabf7a2a95 263 SUPERFAMILY SSF116927 23 134 2.62E-29 T 14-10-2018 IPR035074 EspA/CesA-like JV59_31210 ac180082ecd1ae1505cb6efabf7a2a95 263 Pfam PF03433 EspA-like secreted protein 5 127 2.3E-37 T 14-10-2018 IPR005095 EspA-like secreted protein JV59_28925 eb43daf6a8a159d2b22843ef0c01e429 430 Pfam PF00815 Histidinol dehydrogenase 27 424 6.2E-173 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 JV59_28925 eb43daf6a8a159d2b22843ef0c01e429 430 Gene3D G3DSA:3.40.50.1980 30 229 1.4E-127 T 14-10-2018 JV59_28925 eb43daf6a8a159d2b22843ef0c01e429 430 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 3.7E-104 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 JV59_28925 eb43daf6a8a159d2b22843ef0c01e429 430 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 3.7E-104 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 JV59_28925 eb43daf6a8a159d2b22843ef0c01e429 430 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 3.7E-104 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 JV59_28925 eb43daf6a8a159d2b22843ef0c01e429 430 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 3.7E-104 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 JV59_28925 eb43daf6a8a159d2b22843ef0c01e429 430 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 3.7E-104 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 JV59_28925 eb43daf6a8a159d2b22843ef0c01e429 430 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 3.7E-104 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 JV59_28925 eb43daf6a8a159d2b22843ef0c01e429 430 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 3.7E-104 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 JV59_28925 eb43daf6a8a159d2b22843ef0c01e429 430 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 3.7E-104 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 JV59_28925 eb43daf6a8a159d2b22843ef0c01e429 430 SUPERFAMILY SSF53720 4 424 3.33E-95 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JV59_28925 eb43daf6a8a159d2b22843ef0c01e429 430 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 1.5E-168 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 JV59_28925 eb43daf6a8a159d2b22843ef0c01e429 430 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 42.808 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 JV59_28925 eb43daf6a8a159d2b22843ef0c01e429 430 Gene3D G3DSA:3.40.50.1980 231 346 1.4E-127 T 14-10-2018 JV59_28925 eb43daf6a8a159d2b22843ef0c01e429 430 PIRSF PIRSF000099 1 427 2.0E-172 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 JV59_28925 eb43daf6a8a159d2b22843ef0c01e429 430 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 JV59_25975 7296ac5dc4e92b590d2e0b2afcc25c44 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 7.0E-16 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 JV59_25975 7296ac5dc4e92b590d2e0b2afcc25c44 394 SUPERFAMILY SSF52540 6 219 1.12E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_25975 7296ac5dc4e92b590d2e0b2afcc25c44 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.4E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JV59_25975 7296ac5dc4e92b590d2e0b2afcc25c44 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 2.3E-58 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_25975 7296ac5dc4e92b590d2e0b2afcc25c44 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site JV59_25975 7296ac5dc4e92b590d2e0b2afcc25c44 394 SUPERFAMILY SSF50447 205 301 3.73E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JV59_25975 7296ac5dc4e92b590d2e0b2afcc25c44 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 9.7E-34 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal JV59_25975 7296ac5dc4e92b590d2e0b2afcc25c44 394 SUPERFAMILY SSF50465 298 393 1.55E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal JV59_25975 7296ac5dc4e92b590d2e0b2afcc25c44 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 7.4E-231 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JV59_25975 7296ac5dc4e92b590d2e0b2afcc25c44 394 Gene3D G3DSA:2.40.30.10 206 334 2.1E-52 T 14-10-2018 JV59_25975 7296ac5dc4e92b590d2e0b2afcc25c44 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.613 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JV59_25975 7296ac5dc4e92b590d2e0b2afcc25c44 394 Gene3D G3DSA:3.40.50.300 1 203 1.5E-70 T 14-10-2018 JV59_25975 7296ac5dc4e92b590d2e0b2afcc25c44 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_25975 7296ac5dc4e92b590d2e0b2afcc25c44 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_25975 7296ac5dc4e92b590d2e0b2afcc25c44 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_25975 7296ac5dc4e92b590d2e0b2afcc25c44 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_25975 7296ac5dc4e92b590d2e0b2afcc25c44 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JV59_25975 7296ac5dc4e92b590d2e0b2afcc25c44 394 Gene3D G3DSA:2.40.30.10 338 393 1.0E-29 T 14-10-2018 JV59_24110 143cbd74340950c5ec42768b3417b582 617 SUPERFAMILY SSF52540 349 602 1.38E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_24110 143cbd74340950c5ec42768b3417b582 617 Pfam PF00005 ABC transporter 379 532 1.3E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_24110 143cbd74340950c5ec42768b3417b582 617 SMART SM00382 387 578 1.3E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_24110 143cbd74340950c5ec42768b3417b582 617 Gene3D G3DSA:1.20.1560.10 9 338 8.5E-24 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_24110 143cbd74340950c5ec42768b3417b582 617 ProSitePatterns PS00211 ABC transporters family signature. 504 518 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_24110 143cbd74340950c5ec42768b3417b582 617 Pfam PF00664 ABC transporter transmembrane region 41 308 1.8E-15 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JV59_24110 143cbd74340950c5ec42768b3417b582 617 Gene3D G3DSA:3.40.50.300 351 612 1.3E-92 T 14-10-2018 JV59_24110 143cbd74340950c5ec42768b3417b582 617 SUPERFAMILY SSF90123 30 344 1.7E-49 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_01500 41e91e71b92bf653405689f0b63297d1 219 Pfam PF00484 Carbonic anhydrase 38 188 1.1E-48 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JV59_01500 41e91e71b92bf653405689f0b63297d1 219 SUPERFAMILY SSF53056 2 212 1.57E-72 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 JV59_01500 41e91e71b92bf653405689f0b63297d1 219 SMART SM00947 30 192 3.2E-64 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JV59_01500 41e91e71b92bf653405689f0b63297d1 219 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JV59_01500 41e91e71b92bf653405689f0b63297d1 219 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JV59_01500 41e91e71b92bf653405689f0b63297d1 219 Gene3D G3DSA:3.40.1050.10 1 217 1.9E-85 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 JV59_38320 558a2a937ca24188f9c34f6b3c9ddda6 254 Pfam PF13183 4Fe-4S dicluster domain 147 219 7.9E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JV59_38320 558a2a937ca24188f9c34f6b3c9ddda6 254 SUPERFAMILY SSF54292 5 106 1.11E-29 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JV59_38320 558a2a937ca24188f9c34f6b3c9ddda6 254 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 7.5E-95 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_38320 558a2a937ca24188f9c34f6b3c9ddda6 254 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 6.9E-34 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_38320 558a2a937ca24188f9c34f6b3c9ddda6 254 SUPERFAMILY SSF46548 107 226 9.07E-31 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JV59_38320 558a2a937ca24188f9c34f6b3c9ddda6 254 Gene3D G3DSA:1.10.1060.10 107 244 6.6E-50 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JV59_38320 558a2a937ca24188f9c34f6b3c9ddda6 254 Gene3D G3DSA:3.10.20.30 1 106 1.1E-35 T 14-10-2018 IPR012675 Beta-grasp domain superfamily JV59_38320 558a2a937ca24188f9c34f6b3c9ddda6 254 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JV59_38320 558a2a937ca24188f9c34f6b3c9ddda6 254 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 JV59_17940 829c592934ff1e0846430c30ef2fd5a3 382 Gene3D G3DSA:1.20.1090.10 184 382 7.2E-80 T 14-10-2018 JV59_17940 829c592934ff1e0846430c30ef2fd5a3 382 SUPERFAMILY SSF56796 5 381 7.59E-138 T 14-10-2018 JV59_17940 829c592934ff1e0846430c30ef2fd5a3 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 JV59_17940 829c592934ff1e0846430c30ef2fd5a3 382 Gene3D G3DSA:3.40.50.1970 2 183 4.3E-57 T 14-10-2018 JV59_17940 829c592934ff1e0846430c30ef2fd5a3 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 374 2.1E-128 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 JV59_17940 829c592934ff1e0846430c30ef2fd5a3 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 JV59_30675 ce7bf9aed3ca5c5d7cc57808dda476d7 241 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 190 218 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 JV59_30675 ce7bf9aed3ca5c5d7cc57808dda476d7 241 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 182 216 7.5E-8 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_30675 ce7bf9aed3ca5c5d7cc57808dda476d7 241 Gene3D G3DSA:2.160.10.10 43 241 1.1E-36 T 14-10-2018 JV59_30675 ce7bf9aed3ca5c5d7cc57808dda476d7 241 SUPERFAMILY SSF51161 76 238 1.83E-32 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JV59_32570 384e217744d579b57197320b18366672 357 PIRSF PIRSF009283 1 355 4.7E-124 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 JV59_32570 384e217744d579b57197320b18366672 357 Gene3D G3DSA:3.10.180.10 2 155 2.1E-45 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_32570 384e217744d579b57197320b18366672 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 1.2E-131 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 JV59_32570 384e217744d579b57197320b18366672 357 Gene3D G3DSA:3.10.180.10 158 355 7.5E-70 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_32570 384e217744d579b57197320b18366672 357 SUPERFAMILY SSF54593 4 341 3.42E-76 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_32570 384e217744d579b57197320b18366672 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 274 3.8E-14 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JV59_32570 384e217744d579b57197320b18366672 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 144 1.3E-55 T 14-10-2018 JV59_36525 98bb3cd4638a72c7e6da6a269af5f2ec 480 Gene3D G3DSA:3.40.190.10 132 236 9.7E-50 T 14-10-2018 JV59_36525 98bb3cd4638a72c7e6da6a269af5f2ec 480 SMART SM00062 43 280 1.9E-14 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_36525 98bb3cd4638a72c7e6da6a269af5f2ec 480 Pfam PF01464 Transglycosylase SLT domain 303 413 4.1E-15 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 JV59_36525 98bb3cd4638a72c7e6da6a269af5f2ec 480 Gene3D G3DSA:1.10.530.10 298 468 1.5E-35 T 14-10-2018 JV59_36525 98bb3cd4638a72c7e6da6a269af5f2ec 480 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 53 266 3.7E-25 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_36525 98bb3cd4638a72c7e6da6a269af5f2ec 480 SUPERFAMILY SSF53955 301 454 5.77E-33 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily JV59_36525 98bb3cd4638a72c7e6da6a269af5f2ec 480 SUPERFAMILY SSF53850 40 268 3.01E-35 T 14-10-2018 JV59_36525 98bb3cd4638a72c7e6da6a269af5f2ec 480 Gene3D G3DSA:3.40.190.10 39 268 9.7E-50 T 14-10-2018 JV59_37850 52773c016a22fcd291ad642c07554b67 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.934 T 14-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid JV59_37850 52773c016a22fcd291ad642c07554b67 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37850 52773c016a22fcd291ad642c07554b67 101 SUPERFAMILY SSF57716 2 101 3.07E-37 T 14-10-2018 JV59_37850 52773c016a22fcd291ad642c07554b67 101 Gene3D G3DSA:4.10.830.10 41 101 1.0E-22 T 14-10-2018 JV59_37850 52773c016a22fcd291ad642c07554b67 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 7.0E-25 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_28960 2b37d51769f0f3931fcffa75cd7f1fdd 247 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 37.071 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_28960 2b37d51769f0f3931fcffa75cd7f1fdd 247 SUPERFAMILY SSF75625 3 245 9.16E-97 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_28960 2b37d51769f0f3931fcffa75cd7f1fdd 247 Gene3D G3DSA:3.30.70.980 85 236 7.4E-59 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_28960 2b37d51769f0f3931fcffa75cd7f1fdd 247 Pfam PF01709 Transcriptional regulator 5 236 5.6E-96 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_28960 2b37d51769f0f3931fcffa75cd7f1fdd 247 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 2.4E-103 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_28960 2b37d51769f0f3931fcffa75cd7f1fdd 247 Gene3D G3DSA:1.10.10.200 1 81 2.5E-35 T 14-10-2018 IPR017856 Integrase-like, N-terminal JV59_28960 2b37d51769f0f3931fcffa75cd7f1fdd 247 Gene3D G3DSA:3.30.70.980 130 205 7.4E-59 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_26690 0d344885653be2bff0c8f5cabc6d0b56 228 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 213 1.7E-86 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JV59_26690 0d344885653be2bff0c8f5cabc6d0b56 228 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 14-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JV59_26690 0d344885653be2bff0c8f5cabc6d0b56 228 SUPERFAMILY SSF52141 6 222 7.85E-95 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JV59_26690 0d344885653be2bff0c8f5cabc6d0b56 228 Pfam PF03167 Uracil DNA glycosylase superfamily 54 209 4.2E-26 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JV59_26690 0d344885653be2bff0c8f5cabc6d0b56 228 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 39.482 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JV59_26690 0d344885653be2bff0c8f5cabc6d0b56 228 SMART SM00986 49 210 4.2E-39 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JV59_26690 0d344885653be2bff0c8f5cabc6d0b56 228 SMART SM00987 49 210 4.2E-39 T 14-10-2018 JV59_26690 0d344885653be2bff0c8f5cabc6d0b56 228 Gene3D G3DSA:3.40.470.10 1 224 2.0E-104 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JV59_35760 4f7e87c612bb5768e00cd694ad84c055 147 Gene3D G3DSA:3.30.530.20 1 143 7.8E-37 T 14-10-2018 IPR023393 START-like domain superfamily JV59_35760 4f7e87c612bb5768e00cd694ad84c055 147 SUPERFAMILY SSF55961 1 142 8.04E-32 T 14-10-2018 JV59_35760 4f7e87c612bb5768e00cd694ad84c055 147 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 7.3E-31 T 14-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 JV59_39530 01c1cdcc90673c37179d8edbd42c17d8 293 Pfam PF00892 EamA-like transporter family 138 274 1.7E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_39530 01c1cdcc90673c37179d8edbd42c17d8 293 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 274 1.7E-73 T 14-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 JV59_39530 01c1cdcc90673c37179d8edbd42c17d8 293 SUPERFAMILY SSF103481 181 276 3.27E-6 T 14-10-2018 JV59_36400 c0aa4e20b1c259e6ab797f22b006df64 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.2E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_36400 c0aa4e20b1c259e6ab797f22b006df64 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.2E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_36400 c0aa4e20b1c259e6ab797f22b006df64 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.2E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_36400 c0aa4e20b1c259e6ab797f22b006df64 310 Pfam PF03466 LysR substrate binding domain 95 288 1.7E-25 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_36400 c0aa4e20b1c259e6ab797f22b006df64 310 SUPERFAMILY SSF46785 5 87 4.22E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_36400 c0aa4e20b1c259e6ab797f22b006df64 310 Gene3D G3DSA:1.10.10.10 7 93 2.3E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_36400 c0aa4e20b1c259e6ab797f22b006df64 310 SUPERFAMILY SSF53850 95 293 4.16E-30 T 14-10-2018 JV59_36400 c0aa4e20b1c259e6ab797f22b006df64 310 Gene3D G3DSA:3.40.190.10 103 286 1.6E-44 T 14-10-2018 JV59_36400 c0aa4e20b1c259e6ab797f22b006df64 310 Gene3D G3DSA:3.40.190.10 163 259 1.6E-44 T 14-10-2018 JV59_36400 c0aa4e20b1c259e6ab797f22b006df64 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 2.2E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_24120 8bf8ebc473e59c944424a69258f06303 296 Gene3D G3DSA:3.40.190.10 166 263 1.4E-48 T 14-10-2018 JV59_24120 8bf8ebc473e59c944424a69258f06303 296 SUPERFAMILY SSF46785 4 116 3.13E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_24120 8bf8ebc473e59c944424a69258f06303 296 SUPERFAMILY SSF53850 97 294 6.15E-24 T 14-10-2018 JV59_24120 8bf8ebc473e59c944424a69258f06303 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 8.5E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_24120 8bf8ebc473e59c944424a69258f06303 296 Pfam PF03466 LysR substrate binding domain 94 292 1.3E-20 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_24120 8bf8ebc473e59c944424a69258f06303 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 5.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_24120 8bf8ebc473e59c944424a69258f06303 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 5.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_24120 8bf8ebc473e59c944424a69258f06303 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 5.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_24120 8bf8ebc473e59c944424a69258f06303 296 Gene3D G3DSA:3.40.190.10 103 288 1.4E-48 T 14-10-2018 JV59_24120 8bf8ebc473e59c944424a69258f06303 296 Gene3D G3DSA:1.10.10.10 8 98 1.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_36770 c9b3bf3a15043dee852ce8a9f9d23298 232 Pfam PF01048 Phosphorylase superfamily 2 227 7.9E-50 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 JV59_36770 c9b3bf3a15043dee852ce8a9f9d23298 232 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 4.2E-102 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 JV59_36770 c9b3bf3a15043dee852ce8a9f9d23298 232 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 47.921 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 JV59_36770 c9b3bf3a15043dee852ce8a9f9d23298 232 Gene3D G3DSA:3.40.50.1580 1 232 7.7E-71 T 14-10-2018 JV59_36770 c9b3bf3a15043dee852ce8a9f9d23298 232 SUPERFAMILY SSF53167 1 230 4.19E-74 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 JV59_18800 6440b6e2349a9b0e51d5dc4ab0223a1a 420 Pfam PF00271 Helicase conserved C-terminal domain 236 342 2.3E-27 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_18800 6440b6e2349a9b0e51d5dc4ab0223a1a 420 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JV59_18800 6440b6e2349a9b0e51d5dc4ab0223a1a 420 Gene3D G3DSA:3.40.50.300 1 213 7.2E-81 T 14-10-2018 JV59_18800 6440b6e2349a9b0e51d5dc4ab0223a1a 420 SMART SM00490 261 342 2.6E-31 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_18800 6440b6e2349a9b0e51d5dc4ab0223a1a 420 SUPERFAMILY SSF52540 77 363 1.17E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_18800 6440b6e2349a9b0e51d5dc4ab0223a1a 420 SMART SM00487 21 225 4.6E-62 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JV59_18800 6440b6e2349a9b0e51d5dc4ab0223a1a 420 Gene3D G3DSA:3.40.50.300 216 419 1.0E-47 T 14-10-2018 JV59_18800 6440b6e2349a9b0e51d5dc4ab0223a1a 420 Pfam PF00270 DEAD/DEAH box helicase 26 198 6.2E-51 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JV59_35565 4db1ee8eaf2a8de8b90de02de0a53721 148 Pfam PF01475 Ferric uptake regulator family 11 130 7.1E-46 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 JV59_35565 4db1ee8eaf2a8de8b90de02de0a53721 148 Gene3D G3DSA:3.30.1490.190 85 141 3.9E-22 T 14-10-2018 JV59_35565 4db1ee8eaf2a8de8b90de02de0a53721 148 SUPERFAMILY SSF46785 5 135 2.8E-43 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_35565 4db1ee8eaf2a8de8b90de02de0a53721 148 Gene3D G3DSA:1.10.10.10 1 84 3.5E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_00120 f165043b34b0940c668067c394793a8b 158 PIRSF PIRSF029256 1 158 9.2E-67 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 JV59_00120 f165043b34b0940c668067c394793a8b 158 Gene3D G3DSA:3.40.1280.10 1 158 7.0E-64 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JV59_00120 f165043b34b0940c668067c394793a8b 158 SUPERFAMILY SSF75217 2 156 1.24E-43 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases JV59_00120 f165043b34b0940c668067c394793a8b 158 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 157 1.8E-58 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 JV59_00120 f165043b34b0940c668067c394793a8b 158 Pfam PF00588 SpoU rRNA Methylase family 3 145 1.2E-34 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 JV59_00120 f165043b34b0940c668067c394793a8b 158 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 155 32.785 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 JV59_32365 fa4c32d7e0163be12e5530a81ef1c2ef 182 Pfam PF06254 Putative bacterial toxin ydaT 58 101 2.2E-4 T 14-10-2018 IPR009364 Putative bacterial toxin ydaT JV59_32365 fa4c32d7e0163be12e5530a81ef1c2ef 182 Gene3D G3DSA:1.10.3600.10 6 106 2.1E-9 T 14-10-2018 IPR037042 Putative bacterial toxin ydaT superfamily JV59_24575 5ee886e57c130a9612c99ff86ff4f17b 215 SUPERFAMILY SSF52833 5 84 1.68E-13 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_24575 5ee886e57c130a9612c99ff86ff4f17b 215 Gene3D G3DSA:3.40.30.10 5 195 9.2E-53 T 14-10-2018 JV59_24575 5ee886e57c130a9612c99ff86ff4f17b 215 Gene3D G3DSA:1.20.1050.10 84 191 9.2E-53 T 14-10-2018 JV59_24575 5ee886e57c130a9612c99ff86ff4f17b 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 77 1.3E-7 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 JV59_24575 5ee886e57c130a9612c99ff86ff4f17b 215 SUPERFAMILY SSF47616 83 199 1.15E-12 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily JV59_32650 2322faf06d76434b19517aa4a3bda46c 172 Gene3D G3DSA:3.40.50.360 1 163 7.2E-30 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_32650 2322faf06d76434b19517aa4a3bda46c 172 SUPERFAMILY SSF52218 1 163 5.9E-28 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_32650 2322faf06d76434b19517aa4a3bda46c 172 Pfam PF03358 NADPH-dependent FMN reductase 1 115 3.2E-20 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 JV59_36365 ae003db291589eea7aebdc744fcc1927 173 Gene3D G3DSA:1.20.120.1220 2 115 2.6E-5 T 14-10-2018 JV59_36365 ae003db291589eea7aebdc744fcc1927 173 Pfam PF01478 Type IV leader peptidase family 4 106 1.0E-11 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 JV59_24960 55162a3b7c675afc76631a1c0318ffe0 314 PRINTS PR00412 Epoxide hydrolase signature 57 72 3.1E-27 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JV59_24960 55162a3b7c675afc76631a1c0318ffe0 314 PRINTS PR00412 Epoxide hydrolase signature 284 306 3.1E-27 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JV59_24960 55162a3b7c675afc76631a1c0318ffe0 314 PRINTS PR00412 Epoxide hydrolase signature 103 116 3.1E-27 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JV59_24960 55162a3b7c675afc76631a1c0318ffe0 314 PRINTS PR00412 Epoxide hydrolase signature 37 55 3.1E-27 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JV59_24960 55162a3b7c675afc76631a1c0318ffe0 314 PRINTS PR00412 Epoxide hydrolase signature 117 130 3.1E-27 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JV59_24960 55162a3b7c675afc76631a1c0318ffe0 314 Pfam PF00561 alpha/beta hydrolase fold 32 292 2.7E-23 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_24960 55162a3b7c675afc76631a1c0318ffe0 314 Gene3D G3DSA:3.40.50.1820 8 312 5.2E-80 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_24960 55162a3b7c675afc76631a1c0318ffe0 314 SUPERFAMILY SSF53474 10 308 1.05E-68 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_25845 3e015e3c17cf4e8afdb52687eacb52ea 262 SUPERFAMILY SSF117856 31 261 7.85E-78 T 14-10-2018 JV59_25845 3e015e3c17cf4e8afdb52687eacb52ea 262 Gene3D G3DSA:3.30.1330.80 107 229 8.9E-79 T 14-10-2018 JV59_25845 3e015e3c17cf4e8afdb52687eacb52ea 262 Gene3D G3DSA:3.30.1330.80 32 248 8.9E-79 T 14-10-2018 JV59_25845 3e015e3c17cf4e8afdb52687eacb52ea 262 Pfam PF03306 Alpha-acetolactate decarboxylase 32 249 4.9E-81 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 JV59_25845 3e015e3c17cf4e8afdb52687eacb52ea 262 PIRSF PIRSF001332 15 262 1.6E-89 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 JV59_25845 3e015e3c17cf4e8afdb52687eacb52ea 262 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 31 261 1.2E-87 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 JV59_38100 950901bad152dec88c84ed0fde5f4d5c 303 Pfam PF00696 Amino acid kinase family 5 279 2.5E-29 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 JV59_38100 950901bad152dec88c84ed0fde5f4d5c 303 Gene3D G3DSA:3.40.1160.10 1 303 1.1E-114 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JV59_38100 950901bad152dec88c84ed0fde5f4d5c 303 SUPERFAMILY SSF53633 4 300 4.97E-78 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JV59_38100 950901bad152dec88c84ed0fde5f4d5c 303 PRINTS PR01469 Bacterial carbamate kinase signature 44 63 6.0E-62 T 14-10-2018 JV59_38100 950901bad152dec88c84ed0fde5f4d5c 303 PRINTS PR01469 Bacterial carbamate kinase signature 176 194 6.0E-62 T 14-10-2018 JV59_38100 950901bad152dec88c84ed0fde5f4d5c 303 PRINTS PR01469 Bacterial carbamate kinase signature 153 172 6.0E-62 T 14-10-2018 JV59_38100 950901bad152dec88c84ed0fde5f4d5c 303 PRINTS PR01469 Bacterial carbamate kinase signature 206 221 6.0E-62 T 14-10-2018 JV59_38100 950901bad152dec88c84ed0fde5f4d5c 303 PRINTS PR01469 Bacterial carbamate kinase signature 74 92 6.0E-62 T 14-10-2018 JV59_38100 950901bad152dec88c84ed0fde5f4d5c 303 PRINTS PR01469 Bacterial carbamate kinase signature 257 272 6.0E-62 T 14-10-2018 JV59_38100 950901bad152dec88c84ed0fde5f4d5c 303 PRINTS PR01469 Bacterial carbamate kinase signature 105 124 6.0E-62 T 14-10-2018 JV59_38100 950901bad152dec88c84ed0fde5f4d5c 303 PIRSF PIRSF000723 2 302 5.1E-115 T 14-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 JV59_38100 950901bad152dec88c84ed0fde5f4d5c 303 TIGRFAM TIGR00746 arcC: carbamate kinase 5 302 1.8E-119 T 14-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 JV59_21370 75bb4f05a2bbc3a6b5b80e46bd4a68a6 514 Gene3D G3DSA:3.40.630.10 110 404 4.4E-85 T 14-10-2018 JV59_21370 75bb4f05a2bbc3a6b5b80e46bd4a68a6 514 SUPERFAMILY SSF53187 112 394 1.15E-64 T 14-10-2018 JV59_21370 75bb4f05a2bbc3a6b5b80e46bd4a68a6 514 Pfam PF04389 Peptidase family M28 189 383 7.1E-34 T 14-10-2018 IPR007484 Peptidase M28 JV59_21370 75bb4f05a2bbc3a6b5b80e46bd4a68a6 514 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 422 487 1.7E-5 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial JV59_21370 75bb4f05a2bbc3a6b5b80e46bd4a68a6 514 Gene3D G3DSA:2.60.120.380 405 504 1.2E-21 T 14-10-2018 JV59_21370 75bb4f05a2bbc3a6b5b80e46bd4a68a6 514 PIRSF PIRSF036685 2 505 1.1E-183 T 14-10-2018 IPR012189 Peptidase M28E, aminopeptidase AP1 JV59_21370 75bb4f05a2bbc3a6b5b80e46bd4a68a6 514 SUPERFAMILY SSF89260 400 492 9.42E-5 T 14-10-2018 JV59_38190 515d41d26e7634d625a6550ae310c8bd 320 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 JV59_38190 515d41d26e7634d625a6550ae310c8bd 320 SUPERFAMILY SSF51395 10 318 1.25E-90 T 14-10-2018 JV59_38190 515d41d26e7634d625a6550ae310c8bd 320 Pfam PF01207 Dihydrouridine synthase (Dus) 13 317 4.3E-112 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 JV59_38190 515d41d26e7634d625a6550ae310c8bd 320 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 320 49.231 T 14-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 JV59_38190 515d41d26e7634d625a6550ae310c8bd 320 Gene3D G3DSA:3.20.20.70 6 248 1.0E-78 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_38190 515d41d26e7634d625a6550ae310c8bd 320 Gene3D G3DSA:1.10.1200.80 252 320 1.5E-8 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 JV59_38190 515d41d26e7634d625a6550ae310c8bd 320 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 318 2.2E-132 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 JV59_38190 515d41d26e7634d625a6550ae310c8bd 320 PIRSF PIRSF006621 1 320 1.1E-102 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 JV59_18460 d4ed465f6f110c35fddc9127f32c3159 151 TIGRFAM TIGR02695 azurin: azurin 26 150 5.9E-61 T 14-10-2018 IPR014068 Azurin JV59_18460 d4ed465f6f110c35fddc9127f32c3159 151 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 128 144 - T 14-10-2018 IPR028871 Blue (type 1) copper protein, binding site JV59_18460 d4ed465f6f110c35fddc9127f32c3159 151 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 24 150 2.2E-26 T 14-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 JV59_18460 d4ed465f6f110c35fddc9127f32c3159 151 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 28 150 9.0E-59 T 14-10-2018 JV59_18460 d4ed465f6f110c35fddc9127f32c3159 151 SUPERFAMILY SSF49503 24 150 1.06E-44 T 14-10-2018 IPR008972 Cupredoxin JV59_18460 d4ed465f6f110c35fddc9127f32c3159 151 Gene3D G3DSA:2.60.40.420 24 150 5.0E-44 T 14-10-2018 IPR008972 Cupredoxin JV59_21675 ccf13dfc57b8b1e470bc9233010d8072 182 Pfam PF07155 ECF-type riboflavin transporter, S component 3 171 4.3E-42 T 14-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 JV59_21675 ccf13dfc57b8b1e470bc9233010d8072 182 Hamap MF_01572 UPF0397 protein . 1 182 20.942 T 14-10-2018 IPR022914 Protein of unknown function UPF0397 JV59_21675 ccf13dfc57b8b1e470bc9233010d8072 182 Gene3D G3DSA:1.10.1760.20 1 177 4.7E-19 T 14-10-2018 JV59_23355 1b739206f53598971c2486a3c9d6bcfd 367 Gene3D G3DSA:2.40.37.20 6 363 4.4E-112 T 14-10-2018 JV59_23355 1b739206f53598971c2486a3c9d6bcfd 367 SUPERFAMILY SSF51419 13 249 3.34E-37 T 14-10-2018 IPR029066 PLP-binding barrel JV59_23355 1b739206f53598971c2486a3c9d6bcfd 367 Pfam PF01168 Alanine racemase, N-terminal domain 13 243 4.5E-25 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JV59_23355 1b739206f53598971c2486a3c9d6bcfd 367 Pfam PF14031 Putative serine dehydratase domain 263 349 1.6E-22 T 14-10-2018 IPR026956 D-serine dehydratase-like domain JV59_23355 1b739206f53598971c2486a3c9d6bcfd 367 SMART SM01119 263 350 1.6E-31 T 14-10-2018 IPR026956 D-serine dehydratase-like domain JV59_23355 1b739206f53598971c2486a3c9d6bcfd 367 Gene3D G3DSA:3.20.20.10 15 240 4.4E-112 T 14-10-2018 IPR029066 PLP-binding barrel JV59_28190 d08568af7f6e8640b6868076cb3fc61a 93 SUPERFAMILY SSF160191 1 91 3.01E-37 T 14-10-2018 IPR038068 YcgL-like superfamily JV59_28190 d08568af7f6e8640b6868076cb3fc61a 93 Gene3D G3DSA:3.10.510.20 1 73 8.2E-30 T 14-10-2018 IPR038068 YcgL-like superfamily JV59_28190 d08568af7f6e8640b6868076cb3fc61a 93 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 73 1.0E-30 T 14-10-2018 IPR027354 YcgL domain JV59_28190 d08568af7f6e8640b6868076cb3fc61a 93 Hamap MF_01866 Protein YcgL [ycgL]. 1 87 27.23 T 14-10-2018 IPR027354 YcgL domain JV59_28190 d08568af7f6e8640b6868076cb3fc61a 93 Pfam PF05166 YcgL domain 3 74 6.6E-32 T 14-10-2018 IPR027354 YcgL domain JV59_37655 8d262c474276ce5fe1ceb91620a76c86 219 Gene3D G3DSA:3.40.50.300 1 216 1.4E-19 T 14-10-2018 JV59_37655 8d262c474276ce5fe1ceb91620a76c86 219 SUPERFAMILY SSF52540 8 196 4.65E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_38620 6f41c77474ae55898a1d1187bc3f2344 229 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 29 228 7.4E-68 T 14-10-2018 JV59_38620 6f41c77474ae55898a1d1187bc3f2344 229 SUPERFAMILY SSF56112 36 194 5.13E-18 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily JV59_38620 6f41c77474ae55898a1d1187bc3f2344 229 Gene3D G3DSA:1.10.510.10 141 227 2.9E-15 T 14-10-2018 JV59_38620 6f41c77474ae55898a1d1187bc3f2344 229 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 1 229 42.038 T 14-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 JV59_26675 4b2c6423bbadeb8e0c0a84a916ec3039 281 SUPERFAMILY SSF53850 91 279 7.06E-14 T 14-10-2018 JV59_26675 4b2c6423bbadeb8e0c0a84a916ec3039 281 Pfam PF03466 LysR substrate binding domain 118 276 1.1E-9 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_26675 4b2c6423bbadeb8e0c0a84a916ec3039 281 Gene3D G3DSA:1.10.10.10 4 68 1.4E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_26675 4b2c6423bbadeb8e0c0a84a916ec3039 281 Gene3D G3DSA:3.40.190.290 103 275 1.2E-6 T 14-10-2018 JV59_26675 4b2c6423bbadeb8e0c0a84a916ec3039 281 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 9.5E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_26675 4b2c6423bbadeb8e0c0a84a916ec3039 281 SUPERFAMILY SSF46785 4 85 4.09E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_39865 8c0c8ceee95c15540da3c848992d60d3 266 SUPERFAMILY SSF46689 219 264 1.3E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_39865 8c0c8ceee95c15540da3c848992d60d3 266 SUPERFAMILY SSF46689 167 215 2.42E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_39865 8c0c8ceee95c15540da3c848992d60d3 266 Gene3D G3DSA:2.60.120.10 1 87 2.1E-6 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_39865 8c0c8ceee95c15540da3c848992d60d3 266 Pfam PF02311 AraC-like ligand binding domain 14 143 1.1E-25 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 JV59_39865 8c0c8ceee95c15540da3c848992d60d3 266 Gene3D G3DSA:1.10.10.60 227 266 4.9E-9 T 14-10-2018 JV59_39865 8c0c8ceee95c15540da3c848992d60d3 266 SUPERFAMILY SSF51215 24 143 3.14E-20 T 14-10-2018 IPR037923 Transcription regulator HTH-like JV59_39865 8c0c8ceee95c15540da3c848992d60d3 266 SMART SM00342 182 264 5.2E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_39865 8c0c8ceee95c15540da3c848992d60d3 266 Pfam PF12833 Helix-turn-helix domain 191 263 6.4E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_39865 8c0c8ceee95c15540da3c848992d60d3 266 Gene3D G3DSA:1.10.10.60 165 226 6.9E-14 T 14-10-2018 JV59_40710 5fe2e9b75de9490fc2066fb1ea93ebb1 203 SUPERFAMILY SSF140931 36 198 9.94E-29 T 14-10-2018 IPR036597 Fido-like domain superfamily JV59_40710 5fe2e9b75de9490fc2066fb1ea93ebb1 203 Pfam PF02661 Fic/DOC family 59 149 7.9E-15 T 14-10-2018 IPR003812 Fido domain JV59_40710 5fe2e9b75de9490fc2066fb1ea93ebb1 203 TIGRFAM TIGR02613 mob_myst_B: mobile mystery protein B 10 196 1.1E-63 T 14-10-2018 IPR013436 Mobile mystery protein B JV59_40710 5fe2e9b75de9490fc2066fb1ea93ebb1 203 Gene3D G3DSA:1.10.3290.10 22 202 6.7E-34 T 14-10-2018 IPR036597 Fido-like domain superfamily JV59_19985 8f24b14f1e61ad82e8d2f116a3cf872c 262 PIRSF PIRSF016184 1 262 1.0E-50 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 JV59_19985 8f24b14f1e61ad82e8d2f116a3cf872c 262 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 260 1.4E-36 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 JV59_19985 8f24b14f1e61ad82e8d2f116a3cf872c 262 SUPERFAMILY SSF54506 1 262 1.18E-72 T 14-10-2018 JV59_19985 8f24b14f1e61ad82e8d2f116a3cf872c 262 Gene3D G3DSA:3.10.310.10 119 250 3.3E-82 T 14-10-2018 JV59_19985 8f24b14f1e61ad82e8d2f116a3cf872c 262 Pfam PF02567 Phenazine biosynthesis-like protein 9 256 1.7E-55 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 JV59_19985 8f24b14f1e61ad82e8d2f116a3cf872c 262 Gene3D G3DSA:3.10.310.10 7 257 3.3E-82 T 14-10-2018 JV59_24975 c038c2d5d050491cfb35970d10a95ad0 265 Gene3D G3DSA:1.10.10.10 5 99 2.7E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_24975 c038c2d5d050491cfb35970d10a95ad0 265 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 98 7.0E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_24975 c038c2d5d050491cfb35970d10a95ad0 265 SMART SM00862 24 98 2.0E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_24975 c038c2d5d050491cfb35970d10a95ad0 265 SUPERFAMILY SSF46894 26 99 5.67E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_16565 2b7e96ad7ea9cad4c80b6b0b6756925f 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 172 199 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_16565 2b7e96ad7ea9cad4c80b6b0b6756925f 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 2.0E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_16565 2b7e96ad7ea9cad4c80b6b0b6756925f 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 2.0E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_16565 2b7e96ad7ea9cad4c80b6b0b6756925f 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 2.0E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_16565 2b7e96ad7ea9cad4c80b6b0b6756925f 222 Gene3D G3DSA:1.10.10.10 149 216 1.1E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_16565 2b7e96ad7ea9cad4c80b6b0b6756925f 222 SMART SM00421 155 212 5.1E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_16565 2b7e96ad7ea9cad4c80b6b0b6756925f 222 SUPERFAMILY SSF46894 149 214 5.44E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_16565 2b7e96ad7ea9cad4c80b6b0b6756925f 222 Gene3D G3DSA:3.40.50.2300 7 148 1.8E-38 T 14-10-2018 JV59_16565 2b7e96ad7ea9cad4c80b6b0b6756925f 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 212 5.3E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_17035 c1c3315d027881379f7b649016542aba 464 Gene3D G3DSA:3.40.50.720 140 263 2.6E-16 T 14-10-2018 JV59_17035 c1c3315d027881379f7b649016542aba 464 SUPERFAMILY SSF51735 142 269 1.77E-10 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_17035 c1c3315d027881379f7b649016542aba 464 Pfam PF02397 Bacterial sugar transferase 274 456 3.6E-65 T 14-10-2018 IPR003362 Bacterial sugar transferase JV59_17035 c1c3315d027881379f7b649016542aba 464 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 20 464 1.3E-151 T 14-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase JV59_17035 c1c3315d027881379f7b649016542aba 464 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 21 464 1.5E-172 T 14-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 JV59_17035 c1c3315d027881379f7b649016542aba 464 Pfam PF13727 CoA-binding domain 62 238 3.3E-43 T 14-10-2018 JV59_34480 f83d51d995758d66527d743f6566d6a6 267 Pfam PF01063 Amino-transferase class IV 24 247 1.4E-41 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 JV59_34480 f83d51d995758d66527d743f6566d6a6 267 Gene3D G3DSA:3.20.10.10 111 266 7.8E-49 T 14-10-2018 JV59_34480 f83d51d995758d66527d743f6566d6a6 267 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 JV59_34480 f83d51d995758d66527d743f6566d6a6 267 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 263 1.8E-100 T 14-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 JV59_34480 f83d51d995758d66527d743f6566d6a6 267 Gene3D G3DSA:3.30.470.10 1 107 1.3E-28 T 14-10-2018 JV59_34480 f83d51d995758d66527d743f6566d6a6 267 SUPERFAMILY SSF56752 1 263 1.44E-66 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 JV59_27035 5ce20cb07942d5b629c6f86499f7120b 354 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 338 1.3E-85 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 JV59_27035 5ce20cb07942d5b629c6f86499f7120b 354 Gene3D G3DSA:2.40.420.20 268 336 1.5E-68 T 14-10-2018 JV59_27035 5ce20cb07942d5b629c6f86499f7120b 354 Gene3D G3DSA:2.40.30.170 44 267 1.5E-68 T 14-10-2018 JV59_27035 5ce20cb07942d5b629c6f86499f7120b 354 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 43 258 1.0E-30 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JV59_27035 5ce20cb07942d5b629c6f86499f7120b 354 Gene3D G3DSA:2.40.50.100 57 185 1.5E-68 T 14-10-2018 JV59_27035 5ce20cb07942d5b629c6f86499f7120b 354 Gene3D G3DSA:1.10.287.470 92 151 1.5E-68 T 14-10-2018 JV59_27035 5ce20cb07942d5b629c6f86499f7120b 354 SUPERFAMILY SSF111369 47 262 1.57E-37 T 14-10-2018 JV59_32720 818d2e0c7bb5c723b076bd17e8ae6ec9 253 SUPERFAMILY SSF53335 43 241 2.52E-10 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_32720 818d2e0c7bb5c723b076bd17e8ae6ec9 253 Gene3D G3DSA:3.40.50.150 39 249 5.2E-9 T 14-10-2018 JV59_30920 7abc09cd949b289a4137de81face3712 525 Gene3D G3DSA:3.30.465.10 84 203 1.4E-25 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JV59_30920 7abc09cd949b289a4137de81face3712 525 SUPERFAMILY SSF55103 279 513 9.59E-15 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 JV59_30920 7abc09cd949b289a4137de81face3712 525 SUPERFAMILY SSF56176 27 200 2.57E-26 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JV59_30920 7abc09cd949b289a4137de81face3712 525 Gene3D G3DSA:3.30.43.10 4 83 8.0E-10 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 JV59_30920 7abc09cd949b289a4137de81face3712 525 Pfam PF01565 FAD binding domain 30 164 1.0E-20 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 JV59_30920 7abc09cd949b289a4137de81face3712 525 Gene3D G3DSA:3.40.462.10 206 467 3.8E-25 T 14-10-2018 IPR016170 Cytokinin dehydrogenase, C-terminal domain superfamily KEGG: 00908+1.5.99.12 JV59_39060 f1083814a4f40b8d77602e7798e14619 159 Pfam PF04361 Protein of unknown function (DUF494) 2 159 7.6E-59 T 14-10-2018 IPR007456 Smg JV59_39060 f1083814a4f40b8d77602e7798e14619 159 Hamap MF_00598 Protein Smg [smg]. 2 159 32.156 T 14-10-2018 IPR007456 Smg JV59_29440 beacf3dd9e4ff64e1005797251f94856 298 Pfam PF01261 Xylose isomerase-like TIM barrel 34 243 2.3E-26 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain JV59_29440 beacf3dd9e4ff64e1005797251f94856 298 Gene3D G3DSA:3.20.20.150 1 289 3.0E-74 T 14-10-2018 JV59_29440 beacf3dd9e4ff64e1005797251f94856 298 SUPERFAMILY SSF51658 5 287 7.2E-56 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily JV59_29440 beacf3dd9e4ff64e1005797251f94856 298 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 2 289 1.7E-127 T 14-10-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 JV59_34705 be66e59029dffcff3fb08e409defddc3 226 SUPERFAMILY SSF52540 6 224 7.11E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_34705 be66e59029dffcff3fb08e409defddc3 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 3.3E-86 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 JV59_34705 be66e59029dffcff3fb08e409defddc3 226 Gene3D G3DSA:3.40.50.300 1 226 8.4E-83 T 14-10-2018 JV59_34705 be66e59029dffcff3fb08e409defddc3 226 Pfam PF02224 Cytidylate kinase 8 221 6.0E-79 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 JV59_34705 be66e59029dffcff3fb08e409defddc3 226 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.381 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 JV59_17605 06a5e9d948b9df3bc42b0374bc6fdc9a 539 Pfam PF13584 Oxygen tolerance 14 446 5.1E-77 T 14-10-2018 IPR025738 Aerotolerance-related protein BatD JV59_38895 56aeb8a367cd032eec3a56277c4b46b6 407 Gene3D G3DSA:1.20.81.30 56 174 4.2E-38 T 14-10-2018 JV59_38895 56aeb8a367cd032eec3a56277c4b46b6 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 2.7E-38 T 14-10-2018 IPR003004 GspF/PilC family JV59_38895 56aeb8a367cd032eec3a56277c4b46b6 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 2.7E-38 T 14-10-2018 IPR003004 GspF/PilC family JV59_38895 56aeb8a367cd032eec3a56277c4b46b6 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 2.7E-38 T 14-10-2018 IPR003004 GspF/PilC family JV59_38895 56aeb8a367cd032eec3a56277c4b46b6 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 2.7E-38 T 14-10-2018 IPR003004 GspF/PilC family JV59_38895 56aeb8a367cd032eec3a56277c4b46b6 407 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 404 1.5E-158 T 14-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 JV59_38895 56aeb8a367cd032eec3a56277c4b46b6 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 JV59_38895 56aeb8a367cd032eec3a56277c4b46b6 407 Gene3D G3DSA:1.20.81.30 258 370 2.8E-25 T 14-10-2018 JV59_38895 56aeb8a367cd032eec3a56277c4b46b6 407 Pfam PF00482 Type II secretion system (T2SS), protein F 73 195 8.2E-34 T 14-10-2018 IPR018076 Type II secretion system F domain JV59_38895 56aeb8a367cd032eec3a56277c4b46b6 407 Pfam PF00482 Type II secretion system (T2SS), protein F 275 397 1.1E-24 T 14-10-2018 IPR018076 Type II secretion system F domain JV59_22485 03c7aed9e5d1f521f2cfdd70c8ec78ee 305 Gene3D G3DSA:1.10.10.60 202 305 3.4E-24 T 14-10-2018 JV59_22485 03c7aed9e5d1f521f2cfdd70c8ec78ee 305 SUPERFAMILY SSF46689 203 251 2.6E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_22485 03c7aed9e5d1f521f2cfdd70c8ec78ee 305 SMART SM00342 217 300 9.7E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_22485 03c7aed9e5d1f521f2cfdd70c8ec78ee 305 SUPERFAMILY SSF52317 6 185 1.73E-27 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_22485 03c7aed9e5d1f521f2cfdd70c8ec78ee 305 Pfam PF12833 Helix-turn-helix domain 223 302 6.8E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_22485 03c7aed9e5d1f521f2cfdd70c8ec78ee 305 Gene3D G3DSA:3.40.50.880 2 188 1.8E-32 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_22485 03c7aed9e5d1f521f2cfdd70c8ec78ee 305 SUPERFAMILY SSF46689 253 304 1.7E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_22485 03c7aed9e5d1f521f2cfdd70c8ec78ee 305 Pfam PF01965 DJ-1/PfpI family 53 162 1.6E-9 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 JV59_00745 1da60a18f5904605ebaaecae0dd99f71 295 Gene3D G3DSA:2.40.10.350 180 257 1.6E-34 T 14-10-2018 JV59_00745 1da60a18f5904605ebaaecae0dd99f71 295 Pfam PF04085 rod shape-determining protein MreC 123 269 8.2E-39 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 JV59_00745 1da60a18f5904605ebaaecae0dd99f71 295 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 275 3.0E-84 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 JV59_00745 1da60a18f5904605ebaaecae0dd99f71 295 PIRSF PIRSF038471 2 283 1.1E-77 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 JV59_00745 1da60a18f5904605ebaaecae0dd99f71 295 Gene3D G3DSA:2.40.10.340 122 266 1.6E-34 T 14-10-2018 JV59_38870 93afb15363ff3a4c2972915fa5735dc5 341 SUPERFAMILY SSF54523 38 328 1.07E-33 T 14-10-2018 JV59_38870 93afb15363ff3a4c2972915fa5735dc5 341 SUPERFAMILY SSF158544 219 287 2.88E-18 T 14-10-2018 IPR038072 GspK, central domain superfamily JV59_38870 93afb15363ff3a4c2972915fa5735dc5 341 SUPERFAMILY SSF158544 104 216 2.14E-29 T 14-10-2018 IPR038072 GspK, central domain superfamily JV59_38870 93afb15363ff3a4c2972915fa5735dc5 341 Gene3D G3DSA:1.10.40.60 102 218 2.5E-88 T 14-10-2018 IPR038072 GspK, central domain superfamily JV59_38870 93afb15363ff3a4c2972915fa5735dc5 341 Pfam PF03934 Type II secretion system (T2SS), protein K 33 320 1.4E-84 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 JV59_38870 93afb15363ff3a4c2972915fa5735dc5 341 Gene3D G3DSA:1.10.40.60 219 288 2.5E-88 T 14-10-2018 IPR038072 GspK, central domain superfamily JV59_38870 93afb15363ff3a4c2972915fa5735dc5 341 PIRSF PIRSF002786 2 331 2.4E-65 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 JV59_38870 93afb15363ff3a4c2972915fa5735dc5 341 Gene3D G3DSA:3.30.1300.30 44 312 2.5E-88 T 14-10-2018 JV59_22600 c7e86d87a0b354486a063beeee54e07b 221 Gene3D G3DSA:3.40.30.10 5 203 8.9E-44 T 14-10-2018 JV59_22600 c7e86d87a0b354486a063beeee54e07b 221 Pfam PF14497 Glutathione S-transferase, C-terminal domain 126 205 6.8E-6 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal JV59_22600 c7e86d87a0b354486a063beeee54e07b 221 Gene3D G3DSA:1.20.1050.10 86 196 8.9E-44 T 14-10-2018 JV59_22600 c7e86d87a0b354486a063beeee54e07b 221 Pfam PF13409 Glutathione S-transferase, N-terminal domain 12 79 4.8E-10 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 JV59_22600 c7e86d87a0b354486a063beeee54e07b 221 SUPERFAMILY SSF47616 84 205 1.53E-19 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily JV59_22600 c7e86d87a0b354486a063beeee54e07b 221 SUPERFAMILY SSF52833 2 108 5.72E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_01610 6e9822916f3c0321561229bfb69e751c 802 SUPERFAMILY SSF74650 1 269 2.35E-83 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 JV59_01610 6e9822916f3c0321561229bfb69e751c 802 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 728 1.9E-208 T 14-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain JV59_01610 6e9822916f3c0321561229bfb69e751c 802 SUPERFAMILY SSF48208 274 801 8.17E-109 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 JV59_01610 6e9822916f3c0321561229bfb69e751c 802 Gene3D G3DSA:2.70.98.40 1 302 7.9E-117 T 14-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily JV59_01610 6e9822916f3c0321561229bfb69e751c 802 Gene3D G3DSA:1.50.10.10 311 721 3.9E-134 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 JV59_01610 6e9822916f3c0321561229bfb69e751c 802 Gene3D G3DSA:2.60.420.10 722 802 1.6E-29 T 14-10-2018 JV59_01610 6e9822916f3c0321561229bfb69e751c 802 SMART SM01068 1 63 2.3E-20 T 14-10-2018 IPR009342 Putative carbohydrate binding domain JV59_01610 6e9822916f3c0321561229bfb69e751c 802 Pfam PF06165 Glycosyltransferase family 36 21 267 1.8E-85 T 14-10-2018 IPR010383 Glycosyl hydrolase 94 JV59_20155 b0df3f3f2738929defbfbf916926b7a1 306 SUPERFAMILY SSF53187 36 303 3.97E-37 T 14-10-2018 JV59_20155 b0df3f3f2738929defbfbf916926b7a1 306 Gene3D G3DSA:3.40.630.10 4 306 1.2E-117 T 14-10-2018 JV59_20155 b0df3f3f2738929defbfbf916926b7a1 306 Pfam PF00246 Zinc carboxypeptidase 74 146 6.1E-7 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 JV59_17895 da9b6a0e723febb131ba2de55935a8b9 300 Pfam PF02355 Protein export membrane protein 102 284 1.8E-54 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial JV59_17895 da9b6a0e723febb131ba2de55935a8b9 300 SUPERFAMILY SSF82866 99 283 2.49E-35 T 14-10-2018 JV59_17895 da9b6a0e723febb131ba2de55935a8b9 300 PRINTS PR01755 Bacterial translocase SecF protein signature 145 159 4.4E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JV59_17895 da9b6a0e723febb131ba2de55935a8b9 300 PRINTS PR01755 Bacterial translocase SecF protein signature 225 240 4.4E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JV59_17895 da9b6a0e723febb131ba2de55935a8b9 300 PRINTS PR01755 Bacterial translocase SecF protein signature 34 49 4.4E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JV59_17895 da9b6a0e723febb131ba2de55935a8b9 300 PRINTS PR01755 Bacterial translocase SecF protein signature 193 211 4.4E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JV59_17895 da9b6a0e723febb131ba2de55935a8b9 300 Pfam PF07549 SecD/SecF GG Motif 30 54 5.8E-9 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site JV59_17895 da9b6a0e723febb131ba2de55935a8b9 300 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 35 276 9.1E-64 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 JV59_17895 da9b6a0e723febb131ba2de55935a8b9 300 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 93 274 6.5E-48 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JV59_17895 da9b6a0e723febb131ba2de55935a8b9 300 Gene3D G3DSA:1.20.1640.10 95 290 5.5E-11 T 14-10-2018 JV59_17895 da9b6a0e723febb131ba2de55935a8b9 300 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 7 287 22.508 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 JV59_30815 5693f8cad8f9f8c86c45720923fcdd30 88 Pfam PF11173 Protein of unknown function (DUF2960) 1 77 1.5E-35 T 14-10-2018 IPR021343 Protein of unknown function DUF2960 JV59_20845 4024420102a6b2688a21acb98a459476 332 PIRSF PIRSF000267 1 332 1.5E-88 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 JV59_20845 4024420102a6b2688a21acb98a459476 332 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 4 321 4.2E-93 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 JV59_20845 4024420102a6b2688a21acb98a459476 332 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 326 2.0E-50 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 JV59_22905 d582d1ce218a9f8b88ba8abdef44badd 549 SUPERFAMILY SSF48371 145 241 1.44E-5 T 14-10-2018 IPR016024 Armadillo-type fold JV59_22905 d582d1ce218a9f8b88ba8abdef44badd 549 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 258 545 1.5E-129 T 14-10-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type JV59_22905 d582d1ce218a9f8b88ba8abdef44badd 549 Pfam PF02653 Branched-chain amino acid transport system / permease component 260 531 1.6E-51 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 JV59_34645 fc1f2fc447421c524626f321cf746bca 264 SMART SM00382 31 226 8.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_34645 fc1f2fc447421c524626f321cf746bca 264 Gene3D G3DSA:3.40.50.300 1 255 1.0E-52 T 14-10-2018 JV59_34645 fc1f2fc447421c524626f321cf746bca 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_34645 fc1f2fc447421c524626f321cf746bca 264 SUPERFAMILY SSF52540 2 231 9.47E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_34645 fc1f2fc447421c524626f321cf746bca 264 Pfam PF00005 ABC transporter 22 177 3.2E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_25820 90f75aeefd964390815577917f5043a5 422 Pfam PF13535 ATP-grasp domain 146 293 2.7E-11 T 14-10-2018 JV59_25820 90f75aeefd964390815577917f5043a5 422 SUPERFAMILY SSF56059 108 315 1.18E-23 T 14-10-2018 JV59_25820 90f75aeefd964390815577917f5043a5 422 Gene3D G3DSA:3.30.470.20 102 412 1.9E-50 T 14-10-2018 JV59_29315 ca961fdbe14501dfc21122ef1af20d9e 290 Gene3D G3DSA:1.10.10.10 2 90 6.3E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_29315 ca961fdbe14501dfc21122ef1af20d9e 290 Gene3D G3DSA:3.40.190.10 163 261 1.6E-58 T 14-10-2018 JV59_29315 ca961fdbe14501dfc21122ef1af20d9e 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_29315 ca961fdbe14501dfc21122ef1af20d9e 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_29315 ca961fdbe14501dfc21122ef1af20d9e 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_29315 ca961fdbe14501dfc21122ef1af20d9e 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.5E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_29315 ca961fdbe14501dfc21122ef1af20d9e 290 SUPERFAMILY SSF46785 3 84 6.15E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_29315 ca961fdbe14501dfc21122ef1af20d9e 290 Gene3D G3DSA:3.40.190.10 91 286 1.6E-58 T 14-10-2018 JV59_29315 ca961fdbe14501dfc21122ef1af20d9e 290 SUPERFAMILY SSF53850 89 290 1.21E-44 T 14-10-2018 JV59_29315 ca961fdbe14501dfc21122ef1af20d9e 290 Pfam PF03466 LysR substrate binding domain 89 289 3.5E-44 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_08285 20de259ef85dcfa7d05de2d4f9dfb471 222 Gene3D G3DSA:3.30.1330.60 80 222 6.5E-44 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_08285 20de259ef85dcfa7d05de2d4f9dfb471 222 Pfam PF00691 OmpA family 118 212 3.9E-22 T 14-10-2018 IPR006665 OmpA-like domain JV59_08285 20de259ef85dcfa7d05de2d4f9dfb471 222 SUPERFAMILY SSF103088 106 221 2.35E-37 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_08285 20de259ef85dcfa7d05de2d4f9dfb471 222 PRINTS PR01021 OMPA domain signature 148 163 3.9E-12 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_08285 20de259ef85dcfa7d05de2d4f9dfb471 222 PRINTS PR01021 OMPA domain signature 118 140 3.9E-12 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_08285 20de259ef85dcfa7d05de2d4f9dfb471 222 PRINTS PR01021 OMPA domain signature 163 179 3.9E-12 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_08285 20de259ef85dcfa7d05de2d4f9dfb471 222 Pfam PF13488 Glycine zipper 38 86 4.3E-11 T 14-10-2018 IPR039567 Glycine zipper domain JV59_27125 d3bed9f8d43be0a5de10019e54d26f66 365 SUPERFAMILY SSF52540 119 320 5.23E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_27125 d3bed9f8d43be0a5de10019e54d26f66 365 Pfam PF02562 PhoH-like protein 120 323 2.1E-94 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 JV59_27125 d3bed9f8d43be0a5de10019e54d26f66 365 Gene3D G3DSA:3.40.50.300 117 323 6.5E-74 T 14-10-2018 JV59_29585 94f6e2ec51f3d11fdae6c85740fe273f 299 Gene3D G3DSA:3.40.190.290 89 294 1.9E-46 T 14-10-2018 JV59_29585 94f6e2ec51f3d11fdae6c85740fe273f 299 Gene3D G3DSA:1.10.10.10 1 87 5.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_29585 94f6e2ec51f3d11fdae6c85740fe273f 299 SUPERFAMILY SSF46785 3 110 6.53E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_29585 94f6e2ec51f3d11fdae6c85740fe273f 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 61 3.1E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_29585 94f6e2ec51f3d11fdae6c85740fe273f 299 Pfam PF03466 LysR substrate binding domain 87 292 3.0E-31 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_29585 94f6e2ec51f3d11fdae6c85740fe273f 299 SUPERFAMILY SSF53850 89 295 1.86E-34 T 14-10-2018 JV59_24280 ab154b80e5a03cf11826b3f3bb6cd62c 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 5.3E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_24280 ab154b80e5a03cf11826b3f3bb6cd62c 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 5.3E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_24280 ab154b80e5a03cf11826b3f3bb6cd62c 182 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 1.3E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_24280 ab154b80e5a03cf11826b3f3bb6cd62c 182 SUPERFAMILY SSF46689 2 68 5.49E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_24280 ab154b80e5a03cf11826b3f3bb6cd62c 182 Gene3D G3DSA:1.10.357.10 1 176 1.8E-22 T 14-10-2018 JV59_36175 4512c5e15ecc7a2ed32e02959371fab6 202 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 1.1E-7 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JV59_36175 4512c5e15ecc7a2ed32e02959371fab6 202 Pfam PF00578 AhpC/TSA family 4 139 1.4E-33 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JV59_36175 4512c5e15ecc7a2ed32e02959371fab6 202 Gene3D G3DSA:3.40.30.10 1 197 2.7E-71 T 14-10-2018 JV59_36175 4512c5e15ecc7a2ed32e02959371fab6 202 SUPERFAMILY SSF52833 1 195 1.19E-65 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_36175 4512c5e15ecc7a2ed32e02959371fab6 202 PIRSF PIRSF000239 1 201 2.7E-58 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JV59_17890 5b7fa474df19edb10f6e05f0486ef260 612 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 590 8.4E-72 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JV59_17890 5b7fa474df19edb10f6e05f0486ef260 612 Pfam PF02355 Protein export membrane protein 430 599 4.4E-17 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial JV59_17890 5b7fa474df19edb10f6e05f0486ef260 612 Gene3D G3DSA:3.30.70.3400 216 292 4.9E-16 T 14-10-2018 JV59_17890 5b7fa474df19edb10f6e05f0486ef260 612 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 15 612 41.631 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 JV59_17890 5b7fa474df19edb10f6e05f0486ef260 612 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 134 598 5.9E-127 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 JV59_17890 5b7fa474df19edb10f6e05f0486ef260 612 Pfam PF07549 SecD/SecF GG Motif 128 151 1.6E-4 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site JV59_17890 5b7fa474df19edb10f6e05f0486ef260 612 Gene3D G3DSA:3.30.1360.200 293 421 8.2E-23 T 14-10-2018 JV59_17890 5b7fa474df19edb10f6e05f0486ef260 612 SUPERFAMILY SSF82866 407 604 1.24E-38 T 14-10-2018 JV59_17890 5b7fa474df19edb10f6e05f0486ef260 612 Gene3D G3DSA:1.20.1640.10 422 608 1.0E-7 T 14-10-2018 JV59_17890 5b7fa474df19edb10f6e05f0486ef260 612 Pfam PF13721 SecD export protein N-terminal TM region 14 109 4.5E-24 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain JV59_00155 6d4f92184943e5a6a5520e6ecfb8aeec 171 Pfam PF02308 MgtC family 19 141 2.0E-29 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 JV59_00155 6d4f92184943e5a6a5520e6ecfb8aeec 171 PRINTS PR01837 MgtC/SapB protein signature 22 41 5.1E-32 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 JV59_00155 6d4f92184943e5a6a5520e6ecfb8aeec 171 PRINTS PR01837 MgtC/SapB protein signature 41 59 5.1E-32 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 JV59_00155 6d4f92184943e5a6a5520e6ecfb8aeec 171 PRINTS PR01837 MgtC/SapB protein signature 68 90 5.1E-32 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 JV59_00155 6d4f92184943e5a6a5520e6ecfb8aeec 171 PRINTS PR01837 MgtC/SapB protein signature 95 119 5.1E-32 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 JV59_16460 a47b5c735445013ce6d3f1415bbc8627 154 SMART SM00226 2 148 1.5E-26 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I JV59_16460 a47b5c735445013ce6d3f1415bbc8627 154 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 143 3.7E-33 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I JV59_16460 a47b5c735445013ce6d3f1415bbc8627 154 SUPERFAMILY SSF52788 1 149 9.81E-40 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily JV59_16460 a47b5c735445013ce6d3f1415bbc8627 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 1.3E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 JV59_16460 a47b5c735445013ce6d3f1415bbc8627 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 1.3E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 JV59_16460 a47b5c735445013ce6d3f1415bbc8627 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 102 115 1.3E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 JV59_16460 a47b5c735445013ce6d3f1415bbc8627 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 1.3E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 JV59_16460 a47b5c735445013ce6d3f1415bbc8627 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 1.3E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 JV59_16460 a47b5c735445013ce6d3f1415bbc8627 154 Gene3D G3DSA:3.40.50.2300 1 153 8.3E-46 T 14-10-2018 JV59_16370 f042f2ad3cdad634068a6ab86884ad7d 79 Pfam PF11137 Protein of unknown function (DUF2909) 5 72 7.0E-18 T 14-10-2018 IPR021313 Protein of unknown function DUF2909 JV59_22260 393f134591b21e2ef8f44caeb0061f8c 269 Pfam PF00557 Metallopeptidase family M24 23 252 1.7E-50 T 14-10-2018 IPR000994 Peptidase M24 JV59_22260 393f134591b21e2ef8f44caeb0061f8c 269 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 15 261 1.8E-90 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 JV59_22260 393f134591b21e2ef8f44caeb0061f8c 269 Hamap MF_01974 Methionine aminopeptidase [map]. 14 262 37.397 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 JV59_22260 393f134591b21e2ef8f44caeb0061f8c 269 PRINTS PR00599 Methionine aminopeptidase-1 signature 173 185 2.4E-20 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 JV59_22260 393f134591b21e2ef8f44caeb0061f8c 269 PRINTS PR00599 Methionine aminopeptidase-1 signature 103 119 2.4E-20 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 JV59_22260 393f134591b21e2ef8f44caeb0061f8c 269 PRINTS PR00599 Methionine aminopeptidase-1 signature 204 216 2.4E-20 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 JV59_22260 393f134591b21e2ef8f44caeb0061f8c 269 PRINTS PR00599 Methionine aminopeptidase-1 signature 80 93 2.4E-20 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 JV59_22260 393f134591b21e2ef8f44caeb0061f8c 269 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 179 197 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 JV59_22260 393f134591b21e2ef8f44caeb0061f8c 269 Gene3D G3DSA:3.90.230.10 13 269 5.4E-99 T 14-10-2018 JV59_22260 393f134591b21e2ef8f44caeb0061f8c 269 SUPERFAMILY SSF55920 15 264 4.97E-84 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like JV59_32165 accc1af604b842fa49d60560def5bb92 219 Pfam PF08732 HIM1 68 157 4.8E-10 T 14-10-2018 IPR014843 Protein Him1/Fmp52 JV59_32165 accc1af604b842fa49d60560def5bb92 219 SUPERFAMILY SSF51735 2 199 4.23E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_32165 accc1af604b842fa49d60560def5bb92 219 Gene3D G3DSA:3.40.50.720 1 217 1.7E-46 T 14-10-2018 JV59_19230 9420322da4b5de5c03e20af7d63875f9 581 Gene3D G3DSA:3.90.780.10 367 576 3.5E-34 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_19230 9420322da4b5de5c03e20af7d63875f9 581 SUPERFAMILY SSF55816 368 563 5.23E-38 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_19230 9420322da4b5de5c03e20af7d63875f9 581 PRINTS PR01607 Apyrase family signature 272 292 2.2E-16 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_19230 9420322da4b5de5c03e20af7d63875f9 581 PRINTS PR01607 Apyrase family signature 512 531 2.2E-16 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_19230 9420322da4b5de5c03e20af7d63875f9 581 PRINTS PR01607 Apyrase family signature 9 27 2.2E-16 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_19230 9420322da4b5de5c03e20af7d63875f9 581 PRINTS PR01607 Apyrase family signature 232 255 2.2E-16 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_19230 9420322da4b5de5c03e20af7d63875f9 581 PRINTS PR01607 Apyrase family signature 213 230 2.2E-16 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_19230 9420322da4b5de5c03e20af7d63875f9 581 Pfam PF02872 5'-nucleotidase, C-terminal domain 368 537 3.4E-23 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 JV59_19230 9420322da4b5de5c03e20af7d63875f9 581 SUPERFAMILY SSF56300 10 324 3.37E-73 T 14-10-2018 JV59_19230 9420322da4b5de5c03e20af7d63875f9 581 Gene3D G3DSA:3.60.21.10 2 366 1.1E-87 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JV59_19230 9420322da4b5de5c03e20af7d63875f9 581 Pfam PF00149 Calcineurin-like phosphoesterase 12 249 9.0E-9 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 JV59_02515 d23b80b9b516ba77e5889e49a623cc4d 381 SUPERFAMILY SSF53756 8 379 2.24E-26 T 14-10-2018 JV59_02515 d23b80b9b516ba77e5889e49a623cc4d 381 Pfam PF02684 Lipid-A-disaccharide synthetase 11 375 3.1E-130 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 JV59_02515 d23b80b9b516ba77e5889e49a623cc4d 381 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 1 378 8.0E-143 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 JV59_02515 d23b80b9b516ba77e5889e49a623cc4d 381 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 6 380 41.755 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 JV59_33660 9adbf2138e53ef70c120738d8a383d4f 232 Gene3D G3DSA:2.60.40.2130 22 192 2.5E-50 T 14-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 JV59_33660 9adbf2138e53ef70c120738d8a383d4f 232 Pfam PF06468 Spondin_N 35 207 3.4E-50 T 14-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 JV59_33905 9ad7e99a12184d783a74d17a78c126f2 464 SUPERFAMILY SSF48452 64 260 1.48E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_33495 240950a3bccecebba1a40a4a5adbc93b 344 Gene3D G3DSA:1.10.10.60 228 340 8.1E-24 T 14-10-2018 JV59_33495 240950a3bccecebba1a40a4a5adbc93b 344 SUPERFAMILY SSF46689 288 338 9.41E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_33495 240950a3bccecebba1a40a4a5adbc93b 344 SMART SM00342 252 335 1.8E-15 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_33495 240950a3bccecebba1a40a4a5adbc93b 344 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 289 331 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JV59_33495 240950a3bccecebba1a40a4a5adbc93b 344 Pfam PF12833 Helix-turn-helix domain 258 337 5.7E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_36570 ee372ac8c0706f11f58ffa36e8c75dda 123 SUPERFAMILY SSF141371 1 119 2.55E-30 T 14-10-2018 JV59_36570 ee372ac8c0706f11f58ffa36e8c75dda 123 PIRSF PIRSF028141 1 120 1.0E-38 T 14-10-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type JV59_36570 ee372ac8c0706f11f58ffa36e8c75dda 123 Gene3D G3DSA:2.40.10.220 1 120 7.7E-29 T 14-10-2018 JV59_36570 ee372ac8c0706f11f58ffa36e8c75dda 123 Pfam PF07238 PilZ domain 3 100 6.1E-13 T 14-10-2018 IPR009875 PilZ domain GO:0035438 JV59_21630 2706d89a86d373e82955496d1d4c1d20 325 Gene3D G3DSA:3.90.1200.10 117 255 9.6E-6 T 14-10-2018 JV59_21630 2706d89a86d373e82955496d1d4c1d20 325 SMART SM00587 110 267 5.6E-5 T 14-10-2018 IPR015897 CHK kinase-like JV59_21630 2706d89a86d373e82955496d1d4c1d20 325 Pfam PF02958 Ecdysteroid kinase 190 268 5.7E-10 T 14-10-2018 IPR004119 Protein of unknown function DUF227 JV59_21630 2706d89a86d373e82955496d1d4c1d20 325 SUPERFAMILY SSF56112 30 306 2.04E-22 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily JV59_22420 d55f930121ee5dbd7e986f34f07aaf29 154 SUPERFAMILY SSF55729 3 136 5.32E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_22420 d55f930121ee5dbd7e986f34f07aaf29 154 Pfam PF13673 Acetyltransferase (GNAT) domain 49 148 1.6E-13 T 14-10-2018 IPR000182 GNAT domain JV59_22420 d55f930121ee5dbd7e986f34f07aaf29 154 Gene3D G3DSA:3.40.630.30 10 147 2.0E-23 T 14-10-2018 JV59_28460 f06f3080b5af8ac67c9a13f1be82c2f3 245 PIRSF PIRSF006325 4 245 2.3E-124 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 JV59_28460 f06f3080b5af8ac67c9a13f1be82c2f3 245 SUPERFAMILY SSF53335 23 245 2.17E-39 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_28460 f06f3080b5af8ac67c9a13f1be82c2f3 245 Gene3D G3DSA:3.40.50.150 21 245 2.9E-63 T 14-10-2018 JV59_28460 f06f3080b5af8ac67c9a13f1be82c2f3 245 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 8 245 6.3E-117 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 JV59_28460 f06f3080b5af8ac67c9a13f1be82c2f3 245 Pfam PF13649 Methyltransferase domain 63 161 6.5E-13 T 14-10-2018 JV59_28460 f06f3080b5af8ac67c9a13f1be82c2f3 245 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 6 245 42.974 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 JV59_00695 2e00ad2767676fcfe2ddb6196a2b0f82 406 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 1.5E-29 T 14-10-2018 IPR018076 Type II secretion system F domain JV59_00695 2e00ad2767676fcfe2ddb6196a2b0f82 406 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 4.4E-27 T 14-10-2018 IPR018076 Type II secretion system F domain JV59_00695 2e00ad2767676fcfe2ddb6196a2b0f82 406 Gene3D G3DSA:1.20.81.30 61 176 8.2E-32 T 14-10-2018 JV59_00695 2e00ad2767676fcfe2ddb6196a2b0f82 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 3.4E-9 T 14-10-2018 IPR003004 GspF/PilC family JV59_00695 2e00ad2767676fcfe2ddb6196a2b0f82 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 3.4E-9 T 14-10-2018 IPR003004 GspF/PilC family JV59_00695 2e00ad2767676fcfe2ddb6196a2b0f82 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 3.4E-9 T 14-10-2018 IPR003004 GspF/PilC family JV59_00695 2e00ad2767676fcfe2ddb6196a2b0f82 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 3.4E-9 T 14-10-2018 IPR003004 GspF/PilC family JV59_00695 2e00ad2767676fcfe2ddb6196a2b0f82 406 Gene3D G3DSA:1.20.81.30 257 370 7.5E-30 T 14-10-2018 JV59_28480 37554754407fe145929925f9e78ecf99 741 SUPERFAMILY SSF53659 5 740 0.0 T 14-10-2018 JV59_28480 37554754407fe145929925f9e78ecf99 741 Gene3D G3DSA:3.40.718.10 408 654 1.6E-9 T 14-10-2018 JV59_28480 37554754407fe145929925f9e78ecf99 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 740 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 JV59_28480 37554754407fe145929925f9e78ecf99 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 JV59_28480 37554754407fe145929925f9e78ecf99 741 PIRSF PIRSF009407 1 741 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 JV59_00720 7899b9701699a43edf2c628a9998ce12 194 SUPERFAMILY SSF54523 18 72 5.34E-5 T 14-10-2018 JV59_00720 7899b9701699a43edf2c628a9998ce12 194 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 37 2.6E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_00720 7899b9701699a43edf2c628a9998ce12 194 Pfam PF07963 Prokaryotic N-terminal methylation motif 14 37 1.3E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_01070 957d932aeb77f6084691e364e232658d 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 2.7E-89 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 JV59_01070 957d932aeb77f6084691e364e232658d 358 Gene3D G3DSA:3.20.20.70 2 358 3.9E-146 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_01070 957d932aeb77f6084691e364e232658d 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 2.4E-110 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 JV59_01070 957d932aeb77f6084691e364e232658d 358 PIRSF PIRSF001359 13 358 5.9E-94 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 JV59_01070 957d932aeb77f6084691e364e232658d 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 JV59_01070 957d932aeb77f6084691e364e232658d 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 JV59_01070 957d932aeb77f6084691e364e232658d 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 2.4E-178 T 14-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 JV59_01070 957d932aeb77f6084691e364e232658d 358 SUPERFAMILY SSF51569 4 356 4.76E-129 T 14-10-2018 JV59_37190 51aa8812a7fbd1d044af5ed340b95fb0 952 SUPERFAMILY SSF63411 742 942 8.83E-39 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JV59_37190 51aa8812a7fbd1d044af5ed340b95fb0 952 SUPERFAMILY SSF63411 520 721 6.83E-44 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JV59_37190 51aa8812a7fbd1d044af5ed340b95fb0 952 SUPERFAMILY SSF63411 278 470 1.44E-28 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JV59_37190 51aa8812a7fbd1d044af5ed340b95fb0 952 Gene3D G3DSA:3.30.830.10 48 272 1.2E-66 T 14-10-2018 JV59_37190 51aa8812a7fbd1d044af5ed340b95fb0 952 Gene3D G3DSA:3.30.830.10 526 730 4.9E-43 T 14-10-2018 JV59_37190 51aa8812a7fbd1d044af5ed340b95fb0 952 Pfam PF00675 Insulinase (Peptidase family M16) 539 655 2.3E-12 T 14-10-2018 IPR011765 Peptidase M16, N-terminal JV59_37190 51aa8812a7fbd1d044af5ed340b95fb0 952 Pfam PF00675 Insulinase (Peptidase family M16) 64 154 3.6E-17 T 14-10-2018 IPR011765 Peptidase M16, N-terminal JV59_37190 51aa8812a7fbd1d044af5ed340b95fb0 952 Gene3D G3DSA:3.30.830.10 742 936 6.4E-36 T 14-10-2018 JV59_37190 51aa8812a7fbd1d044af5ed340b95fb0 952 SUPERFAMILY SSF63411 49 259 1.92E-56 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JV59_37190 51aa8812a7fbd1d044af5ed340b95fb0 952 Gene3D G3DSA:3.30.830.10 276 470 2.2E-28 T 14-10-2018 JV59_37190 51aa8812a7fbd1d044af5ed340b95fb0 952 Pfam PF05193 Peptidase M16 inactive domain 220 393 5.8E-29 T 14-10-2018 IPR007863 Peptidase M16, C-terminal JV59_37190 51aa8812a7fbd1d044af5ed340b95fb0 952 Pfam PF05193 Peptidase M16 inactive domain 687 857 5.0E-21 T 14-10-2018 IPR007863 Peptidase M16, C-terminal JV59_21945 d61b4be4b243e98d063387f51ffd0ca6 254 SUPERFAMILY SSF56317 2 243 6.28E-41 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JV59_21945 d61b4be4b243e98d063387f51ffd0ca6 254 Pfam PF00795 Carbon-nitrogen hydrolase 8 238 8.3E-19 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 JV59_21945 d61b4be4b243e98d063387f51ffd0ca6 254 Gene3D G3DSA:3.60.110.10 1 250 1.2E-43 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JV59_27820 35868a499e0acdc14f348800b61d49de 118 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 41 117 1.1E-14 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JV59_27820 35868a499e0acdc14f348800b61d49de 118 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 118 14.728 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JV59_27820 35868a499e0acdc14f348800b61d49de 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 48 64 7.5E-10 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JV59_27820 35868a499e0acdc14f348800b61d49de 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 103 116 7.5E-10 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JV59_27820 35868a499e0acdc14f348800b61d49de 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 82 98 7.5E-10 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JV59_27820 35868a499e0acdc14f348800b61d49de 118 Pfam PF02049 Flagellar hook-basal body complex protein FliE 41 118 3.6E-24 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JV59_27365 b04b54fd5501dffd2231d4ed96342434 138 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 92 136 3.3E-12 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JV59_27365 b04b54fd5501dffd2231d4ed96342434 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site JV59_27365 b04b54fd5501dffd2231d4ed96342434 138 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 138 1.3E-51 T 14-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 JV59_27365 b04b54fd5501dffd2231d4ed96342434 138 Pfam PF00460 Flagella basal body rod protein 7 32 1.8E-7 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 JV59_35810 5dcee8efa1e3fb14454585e9b59cba42 436 SUPERFAMILY SSF55785 33 133 1.4E-20 T 14-10-2018 IPR035965 PAS domain superfamily JV59_35810 5dcee8efa1e3fb14454585e9b59cba42 436 SMART SM00086 94 136 0.01 T 14-10-2018 IPR001610 PAC motif JV59_35810 5dcee8efa1e3fb14454585e9b59cba42 436 SMART SM00086 214 256 0.0046 T 14-10-2018 IPR001610 PAC motif JV59_35810 5dcee8efa1e3fb14454585e9b59cba42 436 SUPERFAMILY SSF58104 230 430 2.49E-51 T 14-10-2018 JV59_35810 5dcee8efa1e3fb14454585e9b59cba42 436 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 33 141 2.6E-15 T 14-10-2018 IPR000014 PAS domain JV59_35810 5dcee8efa1e3fb14454585e9b59cba42 436 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 155 261 4.8E-16 T 14-10-2018 IPR000014 PAS domain JV59_35810 5dcee8efa1e3fb14454585e9b59cba42 436 Gene3D G3DSA:3.30.450.20 126 246 2.5E-20 T 14-10-2018 JV59_35810 5dcee8efa1e3fb14454585e9b59cba42 436 Gene3D G3DSA:3.30.450.20 6 125 2.4E-19 T 14-10-2018 JV59_35810 5dcee8efa1e3fb14454585e9b59cba42 436 SMART SM00091 141 209 3.7 T 14-10-2018 IPR000014 PAS domain JV59_35810 5dcee8efa1e3fb14454585e9b59cba42 436 SMART SM00091 19 89 2.9 T 14-10-2018 IPR000014 PAS domain JV59_35810 5dcee8efa1e3fb14454585e9b59cba42 436 Pfam PF13426 PAS domain 160 255 6.8E-12 T 14-10-2018 IPR000014 PAS domain JV59_35810 5dcee8efa1e3fb14454585e9b59cba42 436 Pfam PF13426 PAS domain 37 135 1.1E-11 T 14-10-2018 IPR000014 PAS domain JV59_35810 5dcee8efa1e3fb14454585e9b59cba42 436 SMART SM00283 245 432 1.5E-22 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_35810 5dcee8efa1e3fb14454585e9b59cba42 436 Gene3D G3DSA:1.10.287.950 247 435 6.6E-44 T 14-10-2018 JV59_35810 5dcee8efa1e3fb14454585e9b59cba42 436 SUPERFAMILY SSF55785 152 253 1.41E-21 T 14-10-2018 IPR035965 PAS domain superfamily JV59_35810 5dcee8efa1e3fb14454585e9b59cba42 436 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 274 430 1.0E-36 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_34790 7128e8e7a2a4a2f7fc5e0490ba8ae9b2 482 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 378 478 3.4E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_34790 7128e8e7a2a4a2f7fc5e0490ba8ae9b2 482 Gene3D G3DSA:1.10.287.130 229 335 1.8E-17 T 14-10-2018 JV59_34790 7128e8e7a2a4a2f7fc5e0490ba8ae9b2 482 Pfam PF00672 HAMP domain 225 274 8.9E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_34790 7128e8e7a2a4a2f7fc5e0490ba8ae9b2 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 437 5.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_34790 7128e8e7a2a4a2f7fc5e0490ba8ae9b2 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 5.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_34790 7128e8e7a2a4a2f7fc5e0490ba8ae9b2 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 423 5.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_34790 7128e8e7a2a4a2f7fc5e0490ba8ae9b2 482 Gene3D G3DSA:3.30.565.10 337 478 8.5E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_34790 7128e8e7a2a4a2f7fc5e0490ba8ae9b2 482 SMART SM00387 375 480 5.4E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_34790 7128e8e7a2a4a2f7fc5e0490ba8ae9b2 482 SUPERFAMILY SSF55874 339 477 5.11E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_34790 7128e8e7a2a4a2f7fc5e0490ba8ae9b2 482 SMART SM00304 225 277 6.2E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_34790 7128e8e7a2a4a2f7fc5e0490ba8ae9b2 482 SUPERFAMILY SSF47384 262 325 1.94E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_23080 414690ef0b07971ceaf32e175a85afb0 301 Gene3D G3DSA:3.40.190.290 95 289 1.1E-34 T 14-10-2018 JV59_23080 414690ef0b07971ceaf32e175a85afb0 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 4.4E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_23080 414690ef0b07971ceaf32e175a85afb0 301 Gene3D G3DSA:1.10.10.10 7 94 1.2E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_23080 414690ef0b07971ceaf32e175a85afb0 301 SUPERFAMILY SSF46785 7 86 2.33E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_23080 414690ef0b07971ceaf32e175a85afb0 301 SUPERFAMILY SSF53850 91 294 7.78E-29 T 14-10-2018 JV59_23080 414690ef0b07971ceaf32e175a85afb0 301 Pfam PF03466 LysR substrate binding domain 92 287 1.4E-26 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_24500 76ec03b1694143be167841da6a18e61c 89 SUPERFAMILY SSF47598 2 80 9.78E-17 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 JV59_24500 76ec03b1694143be167841da6a18e61c 89 Pfam PF08681 Protein of unknown function (DUF1778) 5 81 6.2E-21 T 14-10-2018 IPR014795 Vibrio phage ICP1, Orf50 JV59_24500 76ec03b1694143be167841da6a18e61c 89 Gene3D G3DSA:1.20.5.780 1 86 1.6E-17 T 14-10-2018 JV59_26175 f3eac5993ed292fe22c74afdb6a27156 165 Pfam PF11736 Protein of unknown function (DUF3299) 31 160 1.5E-44 T 14-10-2018 IPR021727 Protein of unknown function DUF3299 JV59_26175 f3eac5993ed292fe22c74afdb6a27156 165 Gene3D G3DSA:2.40.50.870 25 165 3.5E-47 T 14-10-2018 JV59_38305 eb7563b2166abfbf4805a0eb771f94ee 727 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 28 714 8.4E-266 T 14-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH JV59_24745 49b1d2be8a2b9fe313096742d23b73b2 303 Gene3D G3DSA:1.10.10.10 3 91 1.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_24745 49b1d2be8a2b9fe313096742d23b73b2 303 SUPERFAMILY SSF53850 88 302 2.9E-38 T 14-10-2018 JV59_24745 49b1d2be8a2b9fe313096742d23b73b2 303 Gene3D G3DSA:3.40.190.10 163 272 1.9E-63 T 14-10-2018 JV59_24745 49b1d2be8a2b9fe313096742d23b73b2 303 Pfam PF03466 LysR substrate binding domain 88 301 3.9E-42 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_24745 49b1d2be8a2b9fe313096742d23b73b2 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 3.8E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_24745 49b1d2be8a2b9fe313096742d23b73b2 303 SUPERFAMILY SSF46785 4 85 1.08E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_24745 49b1d2be8a2b9fe313096742d23b73b2 303 Gene3D G3DSA:3.40.190.10 92 299 1.9E-63 T 14-10-2018 JV59_31055 c993e7a0d95808d6e2b0a662beed3bcd 256 Gene3D G3DSA:1.10.3720.10 4 256 3.4E-47 T 14-10-2018 IPR035906 MetI-like superfamily JV59_31055 c993e7a0d95808d6e2b0a662beed3bcd 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 251 3.7E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_31055 c993e7a0d95808d6e2b0a662beed3bcd 256 SUPERFAMILY SSF161098 4 254 1.12E-54 T 14-10-2018 IPR035906 MetI-like superfamily JV59_37005 480104d1df2ed5df62ba2a937c1b55d9 68 Gene3D G3DSA:3.30.1910.10 1 63 2.2E-30 T 14-10-2018 JV59_37005 480104d1df2ed5df62ba2a937c1b55d9 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 1.3E-29 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 JV59_37005 480104d1df2ed5df62ba2a937c1b55d9 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 9.0E-29 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 JV59_39755 f74dd58e42c1a356167c45fb51334c86 312 SUPERFAMILY SSF161098 93 295 3.01E-25 T 14-10-2018 IPR035906 MetI-like superfamily JV59_39755 f74dd58e42c1a356167c45fb51334c86 312 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 69 4.9E-10 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain JV59_39755 f74dd58e42c1a356167c45fb51334c86 312 Gene3D G3DSA:1.10.3720.10 86 306 4.1E-25 T 14-10-2018 IPR035906 MetI-like superfamily JV59_39755 f74dd58e42c1a356167c45fb51334c86 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 309 7.0E-30 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_37810 756d9a7dbdd6c76983597e7873ac5986 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37810 756d9a7dbdd6c76983597e7873ac5986 37 Pfam PF00444 Ribosomal protein L36 1 37 9.4E-19 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37810 756d9a7dbdd6c76983597e7873ac5986 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.137 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37810 756d9a7dbdd6c76983597e7873ac5986 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.0E-23 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37810 756d9a7dbdd6c76983597e7873ac5986 37 SUPERFAMILY SSF57840 1 37 1.02E-16 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37810 756d9a7dbdd6c76983597e7873ac5986 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-9 T 14-10-2018 JV59_36160 c236e9fbbcc627e5176ba1cdd97a7d54 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 11 258 2.4E-114 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 JV59_36160 c236e9fbbcc627e5176ba1cdd97a7d54 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 259 437 1.6E-90 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 JV59_36160 c236e9fbbcc627e5176ba1cdd97a7d54 437 PIRSF PIRSF001362 1 437 4.6E-224 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 JV59_36160 c236e9fbbcc627e5176ba1cdd97a7d54 437 ProSitePatterns PS00161 Isocitrate lyase signature. 196 201 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 JV59_36160 c236e9fbbcc627e5176ba1cdd97a7d54 437 SUPERFAMILY SSF51621 6 437 1.48E-153 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JV59_36160 c236e9fbbcc627e5176ba1cdd97a7d54 437 Gene3D G3DSA:3.20.20.60 2 420 6.2E-183 T 14-10-2018 JV59_36160 c236e9fbbcc627e5176ba1cdd97a7d54 437 Pfam PF00463 Isocitrate lyase family 259 437 8.4E-53 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 JV59_36160 c236e9fbbcc627e5176ba1cdd97a7d54 437 Pfam PF00463 Isocitrate lyase family 15 258 1.5E-61 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 JV59_35250 cfb95b9fcb0f67074dd86752cb69a014 136 SUPERFAMILY SSF101116 6 127 6.28E-40 T 14-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 JV59_35250 cfb95b9fcb0f67074dd86752cb69a014 136 Gene3D G3DSA:1.20.120.340 2 126 9.8E-41 T 14-10-2018 JV59_35250 cfb95b9fcb0f67074dd86752cb69a014 136 Pfam PF02561 Flagellar protein FliS 6 122 1.4E-38 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 JV59_35250 cfb95b9fcb0f67074dd86752cb69a014 136 PIRSF PIRSF039090 1 132 4.2E-44 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 JV59_35250 cfb95b9fcb0f67074dd86752cb69a014 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 6.0E-25 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 JV59_30605 d9155c41b70cdaacf05ae6dc623b918f 551 Gene3D G3DSA:1.20.1560.10 1 303 6.2E-16 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_30605 d9155c41b70cdaacf05ae6dc623b918f 551 SMART SM00382 352 538 6.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_30605 d9155c41b70cdaacf05ae6dc623b918f 551 Gene3D G3DSA:3.40.50.300 321 550 4.1E-41 T 14-10-2018 JV59_30605 d9155c41b70cdaacf05ae6dc623b918f 551 SUPERFAMILY SSF90123 4 303 1.31E-23 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JV59_30605 d9155c41b70cdaacf05ae6dc623b918f 551 Pfam PF00005 ABC transporter 345 481 1.4E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_30605 d9155c41b70cdaacf05ae6dc623b918f 551 SUPERFAMILY SSF52540 323 543 2.32E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_30605 d9155c41b70cdaacf05ae6dc623b918f 551 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 4 531 5.7E-109 T 14-10-2018 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015833|GO:0016021|GO:1904680 JV59_30605 d9155c41b70cdaacf05ae6dc623b918f 551 ProSitePatterns PS00211 ABC transporters family signature. 454 468 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_16930 70b35d1f57673b71997d835b161ab5e7 326 SUPERFAMILY SSF51604 115 318 5.76E-52 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily JV59_16930 70b35d1f57673b71997d835b161ab5e7 326 Gene3D G3DSA:3.30.390.10 1 105 2.3E-27 T 14-10-2018 IPR029017 Enolase-like, N-terminal JV59_16930 70b35d1f57673b71997d835b161ab5e7 326 Gene3D G3DSA:3.20.20.120 116 321 9.8E-57 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily JV59_16930 70b35d1f57673b71997d835b161ab5e7 326 SUPERFAMILY SSF54826 2 106 2.19E-22 T 14-10-2018 JV59_16930 70b35d1f57673b71997d835b161ab5e7 326 Pfam PF13378 Enolase C-terminal domain-like 133 293 9.8E-27 T 14-10-2018 IPR029065 Enolase C-terminal domain-like JV59_16930 70b35d1f57673b71997d835b161ab5e7 326 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 173 204 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 JV59_16930 70b35d1f57673b71997d835b161ab5e7 326 SMART SM00922 130 223 6.4E-18 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal JV59_16930 70b35d1f57673b71997d835b161ab5e7 326 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 3 105 1.3E-8 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain JV59_02200 f22e36ed145ac19e49fd1b882f437ce4 781 Pfam PF07238 PilZ domain 144 245 8.1E-8 T 14-10-2018 IPR009875 PilZ domain GO:0035438 JV59_02200 f22e36ed145ac19e49fd1b882f437ce4 781 Pfam PF07238 PilZ domain 469 554 1.1E-7 T 14-10-2018 IPR009875 PilZ domain GO:0035438 JV59_02200 f22e36ed145ac19e49fd1b882f437ce4 781 Gene3D G3DSA:2.40.10.220 465 589 2.9E-7 T 14-10-2018 JV59_02200 f22e36ed145ac19e49fd1b882f437ce4 781 SUPERFAMILY SSF141371 465 553 3.34E-6 T 14-10-2018 JV59_26225 0631051baf1db86e2f5d9ee71bbe202b 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.63 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 JV59_26225 0631051baf1db86e2f5d9ee71bbe202b 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 JV59_26225 0631051baf1db86e2f5d9ee71bbe202b 175 Pfam PF00719 Inorganic pyrophosphatase 18 173 1.7E-53 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 JV59_26225 0631051baf1db86e2f5d9ee71bbe202b 175 SUPERFAMILY SSF50324 3 174 3.4E-66 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 JV59_26225 0631051baf1db86e2f5d9ee71bbe202b 175 Gene3D G3DSA:3.90.80.10 1 175 8.8E-68 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 JV59_24000 74a6b742c2e702d9db230a661402327b 199 Gene3D G3DSA:3.40.30.10 29 198 8.7E-36 T 14-10-2018 JV59_24000 74a6b742c2e702d9db230a661402327b 199 SUPERFAMILY SSF52833 40 193 6.73E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_24000 74a6b742c2e702d9db230a661402327b 199 Pfam PF02630 SCO1/SenC 25 175 7.8E-30 T 14-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_23340 e5f48e5f921bb3c20105a3f4cc6e730d 633 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 240 1.4E-44 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 JV59_23340 e5f48e5f921bb3c20105a3f4cc6e730d 633 Gene3D G3DSA:3.40.710.10 250 631 7.1E-88 T 14-10-2018 JV59_23340 e5f48e5f921bb3c20105a3f4cc6e730d 633 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 6 625 48.554 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JV59_23340 e5f48e5f921bb3c20105a3f4cc6e730d 633 SUPERFAMILY SSF56601 255 624 3.22E-91 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JV59_23340 e5f48e5f921bb3c20105a3f4cc6e730d 633 Gene3D G3DSA:3.90.1310.10 67 249 1.9E-46 T 14-10-2018 JV59_23340 e5f48e5f921bb3c20105a3f4cc6e730d 633 SUPERFAMILY SSF56519 59 253 4.71E-50 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 JV59_23340 e5f48e5f921bb3c20105a3f4cc6e730d 633 Gene3D G3DSA:3.30.1390.30 88 161 1.9E-46 T 14-10-2018 JV59_23340 e5f48e5f921bb3c20105a3f4cc6e730d 633 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 617 1.1E-70 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 JV59_23340 e5f48e5f921bb3c20105a3f4cc6e730d 633 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 22 622 1.1E-219 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JV59_33100 dc0f2b45e3547d48659d79dd29b3e78d 501 SUPERFAMILY SSF109604 270 469 1.26E-33 T 14-10-2018 JV59_33100 dc0f2b45e3547d48659d79dd29b3e78d 501 SMART SM00471 290 440 4.1E-10 T 14-10-2018 IPR003607 HD/PDEase domain JV59_33100 dc0f2b45e3547d48659d79dd29b3e78d 501 Gene3D G3DSA:1.10.3210.10 269 483 9.7E-78 T 14-10-2018 JV59_33100 dc0f2b45e3547d48659d79dd29b3e78d 501 Pfam PF13487 HD domain 353 422 2.3E-19 T 14-10-2018 JV59_28780 eb3130d573f9ab6e9cae66fdfe7361ef 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 5.1E-88 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 JV59_28780 eb3130d573f9ab6e9cae66fdfe7361ef 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 JV59_28780 eb3130d573f9ab6e9cae66fdfe7361ef 268 SUPERFAMILY SSF56219 1 268 3.14E-87 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JV59_28780 eb3130d573f9ab6e9cae66fdfe7361ef 268 Gene3D G3DSA:3.60.10.10 1 268 2.2E-80 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JV59_28780 eb3130d573f9ab6e9cae66fdfe7361ef 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 14-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 JV59_28780 eb3130d573f9ab6e9cae66fdfe7361ef 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 3.2E-19 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase JV59_28780 eb3130d573f9ab6e9cae66fdfe7361ef 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 4.5E-101 T 14-10-2018 JV59_37340 2f663bdb8744388dcfa18027c1b4dd19 969 SMART SM00490 519 603 2.7E-17 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_37340 2f663bdb8744388dcfa18027c1b4dd19 969 Pfam PF00176 SNF2 family N-terminal domain 174 344 3.1E-14 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 JV59_37340 2f663bdb8744388dcfa18027c1b4dd19 969 Gene3D G3DSA:3.30.360.80 714 786 4.7E-30 T 14-10-2018 JV59_37340 2f663bdb8744388dcfa18027c1b4dd19 969 Gene3D G3DSA:2.30.30.930 55 114 3.4E-25 T 14-10-2018 JV59_37340 2f663bdb8744388dcfa18027c1b4dd19 969 Gene3D G3DSA:3.40.50.10810 150 430 8.5E-104 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily JV59_37340 2f663bdb8744388dcfa18027c1b4dd19 969 Pfam PF00271 Helicase conserved C-terminal domain 494 603 1.2E-15 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_37340 2f663bdb8744388dcfa18027c1b4dd19 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 6.9E-147 T 14-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 JV59_37340 2f663bdb8744388dcfa18027c1b4dd19 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 29.037 T 14-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 JV59_37340 2f663bdb8744388dcfa18027c1b4dd19 969 Gene3D G3DSA:3.40.50.300 431 635 1.9E-45 T 14-10-2018 JV59_37340 2f663bdb8744388dcfa18027c1b4dd19 969 SUPERFAMILY SSF52540 198 668 4.07E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_37340 2f663bdb8744388dcfa18027c1b4dd19 969 SMART SM00487 150 342 6.0E-14 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JV59_37340 2f663bdb8744388dcfa18027c1b4dd19 969 SUPERFAMILY SSF52540 122 373 9.84E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_37340 2f663bdb8744388dcfa18027c1b4dd19 969 Gene3D G3DSA:2.30.30.140 1 53 5.7E-24 T 14-10-2018 JV59_28515 afd0b16590866909788928b3b856b69e 77 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 76 1.0E-39 T 14-10-2018 IPR013468 Conserved hypothetical protein CHP02647 JV59_28515 afd0b16590866909788928b3b856b69e 77 Pfam PF06146 Phosphate-starvation-inducible E 9 68 3.6E-11 T 14-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like JV59_16040 31431896aea957b3d2fa9baf5ec6b021 138 Gene3D G3DSA:1.10.10.10 2 138 1.7E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_16040 31431896aea957b3d2fa9baf5ec6b021 138 SMART SM00347 24 124 8.6E-22 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_16040 31431896aea957b3d2fa9baf5ec6b021 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 5.0E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_16040 31431896aea957b3d2fa9baf5ec6b021 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 5.0E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_16040 31431896aea957b3d2fa9baf5ec6b021 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 5.0E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_16040 31431896aea957b3d2fa9baf5ec6b021 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 5.0E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_16040 31431896aea957b3d2fa9baf5ec6b021 138 SUPERFAMILY SSF46785 6 136 5.82E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_16040 31431896aea957b3d2fa9baf5ec6b021 138 Pfam PF01047 MarR family 32 88 5.4E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_19125 3e9d2580c0943e9441d38436b58b5f71 709 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 27 709 4.0E-144 T 14-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 JV59_19125 3e9d2580c0943e9441d38436b58b5f71 709 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 28 709 6.6E-153 T 14-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 JV59_19125 3e9d2580c0943e9441d38436b58b5f71 709 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 155 2.9E-27 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain JV59_19125 3e9d2580c0943e9441d38436b58b5f71 709 SUPERFAMILY SSF56935 19 709 5.86E-120 T 14-10-2018 JV59_19125 3e9d2580c0943e9441d38436b58b5f71 709 Gene3D G3DSA:2.170.130.10 27 160 2.7E-36 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily JV59_19125 3e9d2580c0943e9441d38436b58b5f71 709 Gene3D G3DSA:2.40.170.20 171 709 2.4E-118 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily JV59_19125 3e9d2580c0943e9441d38436b58b5f71 709 Pfam PF00593 TonB dependent receptor 234 707 1.2E-63 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel JV59_20710 2f6f5da75313b200cacff511c7d95dd0 316 Gene3D G3DSA:2.40.50.100 33 66 2.3E-6 T 14-10-2018 JV59_20710 2f6f5da75313b200cacff511c7d95dd0 316 SUPERFAMILY SSF111369 32 87 5.49E-6 T 14-10-2018 JV59_20710 2f6f5da75313b200cacff511c7d95dd0 316 Pfam PF13437 HlyD family secretion protein 195 299 6.3E-9 T 14-10-2018 JV59_20710 2f6f5da75313b200cacff511c7d95dd0 316 Gene3D G3DSA:2.40.30.170 231 307 7.3E-8 T 14-10-2018 JV59_20710 2f6f5da75313b200cacff511c7d95dd0 316 Gene3D G3DSA:1.10.287.470 168 195 7.3E-8 T 14-10-2018 JV59_20710 2f6f5da75313b200cacff511c7d95dd0 316 Gene3D G3DSA:2.40.50.100 196 230 7.3E-8 T 14-10-2018 JV59_20710 2f6f5da75313b200cacff511c7d95dd0 316 SUPERFAMILY SSF111369 101 157 8.11E-7 T 14-10-2018 JV59_20710 2f6f5da75313b200cacff511c7d95dd0 316 Gene3D G3DSA:1.10.287.470 98 161 8.8E-11 T 14-10-2018 JV59_20710 2f6f5da75313b200cacff511c7d95dd0 316 Gene3D G3DSA:1.10.287.470 67 87 2.3E-6 T 14-10-2018 JV59_37065 91d92aca64261f41cea4a6ec345e2cf9 602 Gene3D G3DSA:3.40.50.12780 2 313 1.4E-54 T 14-10-2018 JV59_37065 91d92aca64261f41cea4a6ec345e2cf9 602 Pfam PF00501 AMP-binding enzyme 13 466 3.8E-99 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JV59_37065 91d92aca64261f41cea4a6ec345e2cf9 602 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 14-10-2018 IPR020845 AMP-binding, conserved site JV59_37065 91d92aca64261f41cea4a6ec345e2cf9 602 Gene3D G3DSA:3.40.50.12780 316 462 3.4E-36 T 14-10-2018 JV59_37065 91d92aca64261f41cea4a6ec345e2cf9 602 SUPERFAMILY SSF56801 7 597 4.19E-116 T 14-10-2018 JV59_21670 d6fd2e34c9b7968e7f10c7c7248ef607 266 SUPERFAMILY SSF100950 1 263 3.49E-103 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JV59_21670 d6fd2e34c9b7968e7f10c7c7248ef607 266 Gene3D G3DSA:3.40.50.1360 1 266 2.8E-118 T 14-10-2018 JV59_21670 d6fd2e34c9b7968e7f10c7c7248ef607 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 224 1.2E-19 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 JV59_21670 d6fd2e34c9b7968e7f10c7c7248ef607 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 14-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 JV59_21670 d6fd2e34c9b7968e7f10c7c7248ef607 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 1.2E-136 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 JV59_21670 d6fd2e34c9b7968e7f10c7c7248ef607 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.875 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 JV59_37510 b4d5a47e0b6aefe506cf2f9e4e04f9e1 92 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 5 85 1.6E-22 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like JV59_37510 b4d5a47e0b6aefe506cf2f9e4e04f9e1 92 Gene3D G3DSA:3.30.1340.10 3 86 6.5E-28 T 14-10-2018 IPR035895 HPr-like superfamily JV59_37510 b4d5a47e0b6aefe506cf2f9e4e04f9e1 92 Pfam PF00381 PTS HPr component phosphorylation site 5 85 4.6E-24 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like JV59_37510 b4d5a47e0b6aefe506cf2f9e4e04f9e1 92 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 15 22 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site JV59_37510 b4d5a47e0b6aefe506cf2f9e4e04f9e1 92 PRINTS PR00107 Phosphocarrier protein signature 41 56 1.4E-14 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like JV59_37510 b4d5a47e0b6aefe506cf2f9e4e04f9e1 92 PRINTS PR00107 Phosphocarrier protein signature 56 73 1.4E-14 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like JV59_37510 b4d5a47e0b6aefe506cf2f9e4e04f9e1 92 PRINTS PR00107 Phosphocarrier protein signature 15 31 1.4E-14 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like JV59_37510 b4d5a47e0b6aefe506cf2f9e4e04f9e1 92 SUPERFAMILY SSF55594 5 90 2.75E-24 T 14-10-2018 IPR035895 HPr-like superfamily JV59_37510 b4d5a47e0b6aefe506cf2f9e4e04f9e1 92 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 42 57 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site JV59_27095 991a6955c49329cf59955ba87c46672a 105 SUPERFAMILY SSF81301 2 105 1.37E-37 T 14-10-2018 JV59_27095 991a6955c49329cf59955ba87c46672a 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 6.6E-39 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS JV59_27095 991a6955c49329cf59955ba87c46672a 105 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 5.0E-28 T 14-10-2018 JV59_27095 991a6955c49329cf59955ba87c46672a 105 Gene3D G3DSA:3.30.460.10 1 105 6.4E-37 T 14-10-2018 JV59_27095 991a6955c49329cf59955ba87c46672a 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.877 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS JV59_24775 b44f6e658973cf64e2758a1db78d9f52 230 SUPERFAMILY SSF51182 45 224 2.08E-28 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JV59_24775 b44f6e658973cf64e2758a1db78d9f52 230 Pfam PF02678 Pirin 62 127 9.3E-13 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 JV59_24775 b44f6e658973cf64e2758a1db78d9f52 230 Gene3D G3DSA:2.60.120.10 33 226 2.4E-21 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_19920 edb4008b7bc58bf8ef77613b74e35298 345 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 10 49 2.8E-8 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain JV59_19920 edb4008b7bc58bf8ef77613b74e35298 345 SUPERFAMILY SSF161098 138 325 4.19E-20 T 14-10-2018 IPR035906 MetI-like superfamily JV59_19920 edb4008b7bc58bf8ef77613b74e35298 345 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 340 6.6E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_19920 edb4008b7bc58bf8ef77613b74e35298 345 Gene3D G3DSA:1.10.3720.10 131 342 1.0E-18 T 14-10-2018 IPR035906 MetI-like superfamily JV59_22670 8003dec87f53002cc5c9114443fbd417 226 SMART SM00448 1 112 1.7E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_22670 8003dec87f53002cc5c9114443fbd417 226 Gene3D G3DSA:1.10.10.10 125 226 1.2E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_22670 8003dec87f53002cc5c9114443fbd417 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 222 7.4E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_22670 8003dec87f53002cc5c9114443fbd417 226 SMART SM00862 147 222 6.4E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_22670 8003dec87f53002cc5c9114443fbd417 226 Gene3D G3DSA:3.40.50.2300 1 122 4.8E-35 T 14-10-2018 JV59_22670 8003dec87f53002cc5c9114443fbd417 226 SUPERFAMILY SSF52172 1 176 3.52E-36 T 14-10-2018 IPR011006 CheY-like superfamily JV59_22670 8003dec87f53002cc5c9114443fbd417 226 Pfam PF00072 Response regulator receiver domain 3 111 1.4E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_17665 411c405ab4937bdd149858b9188eca90 426 SUPERFAMILY SSF47384 192 277 1.14E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_17665 411c405ab4937bdd149858b9188eca90 426 SMART SM00388 209 276 1.7E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_17665 411c405ab4937bdd149858b9188eca90 426 Gene3D G3DSA:3.30.565.10 282 408 4.6E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_17665 411c405ab4937bdd149858b9188eca90 426 SUPERFAMILY SSF55874 277 398 7.39E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_17665 411c405ab4937bdd149858b9188eca90 426 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 274 1.3E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_17665 411c405ab4937bdd149858b9188eca90 426 Gene3D G3DSA:1.10.287.130 160 277 4.2E-16 T 14-10-2018 JV59_33840 089be231913d3809821b39d1dc368695 414 Pfam PF12704 MacB-like periplasmic core domain 30 240 1.1E-12 T 14-10-2018 IPR025857 MacB-like periplasmic core domain JV59_33840 089be231913d3809821b39d1dc368695 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 4 414 3.3E-203 T 14-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 JV59_33840 089be231913d3809821b39d1dc368695 414 Pfam PF02687 FtsX-like permease family 300 407 8.1E-13 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JV59_33840 089be231913d3809821b39d1dc368695 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 1.9E-153 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 JV59_19385 00c1324c3beff7586d65822653e11ae4 205 PIRSF PIRSF020606 1 203 2.1E-79 T 14-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 JV59_19385 00c1324c3beff7586d65822653e11ae4 205 Pfam PF09997 Predicted membrane protein (DUF2238) 45 180 9.9E-52 T 14-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 JV59_26915 6385420eaa1df25dd1a801b1c9ac7f7a 205 Hamap MF_00052_B Ribonuclease HII [rnhB]. 19 198 37.897 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 JV59_26915 6385420eaa1df25dd1a801b1c9ac7f7a 205 Gene3D G3DSA:3.30.420.10 3 205 2.3E-79 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JV59_26915 6385420eaa1df25dd1a801b1c9ac7f7a 205 SUPERFAMILY SSF53098 13 203 3.19E-71 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JV59_26915 6385420eaa1df25dd1a801b1c9ac7f7a 205 Pfam PF01351 Ribonuclease HII 21 197 2.2E-39 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain JV59_22940 613ee64ccafc3a2c458e9b1a113b2bb6 204 SUPERFAMILY SSF48498 77 200 1.14E-39 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JV59_22940 613ee64ccafc3a2c458e9b1a113b2bb6 204 Pfam PF08362 YcdC-like protein, C-terminal region 59 200 3.3E-52 T 14-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 JV59_22940 613ee64ccafc3a2c458e9b1a113b2bb6 204 Gene3D G3DSA:1.10.10.60 1 58 2.7E-17 T 14-10-2018 JV59_22940 613ee64ccafc3a2c458e9b1a113b2bb6 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 1.3E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_22940 613ee64ccafc3a2c458e9b1a113b2bb6 204 Gene3D G3DSA:1.10.357.10 59 201 5.1E-44 T 14-10-2018 JV59_22940 613ee64ccafc3a2c458e9b1a113b2bb6 204 SUPERFAMILY SSF46689 3 78 1.13E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_22940 613ee64ccafc3a2c458e9b1a113b2bb6 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.9E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_22940 613ee64ccafc3a2c458e9b1a113b2bb6 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.9E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_37385 15ec8793f593c9a14ca5d9ef36457963 322 SUPERFAMILY SSF53850 25 321 9.78E-88 T 14-10-2018 JV59_37385 15ec8793f593c9a14ca5d9ef36457963 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 5 319 1.2E-111 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family JV59_37385 15ec8793f593c9a14ca5d9ef36457963 322 Gene3D G3DSA:3.40.190.10 117 255 1.1E-109 T 14-10-2018 JV59_37385 15ec8793f593c9a14ca5d9ef36457963 322 Gene3D G3DSA:3.40.190.10 30 319 1.1E-109 T 14-10-2018 JV59_37385 15ec8793f593c9a14ca5d9ef36457963 322 Pfam PF16868 NMT1-like family 30 319 3.7E-97 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family JV59_38815 b2728b87de93de1bcc30c53bcc5825ac 234 Gene3D G3DSA:3.40.50.2020 113 233 6.1E-17 T 14-10-2018 JV59_38815 b2728b87de93de1bcc30c53bcc5825ac 234 SUPERFAMILY SSF53271 58 231 7.21E-34 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like JV59_38815 b2728b87de93de1bcc30c53bcc5825ac 234 Pfam PF00156 Phosphoribosyl transferase domain 143 230 3.8E-11 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 JV59_32225 d8f0ec29fceb7c84bf78b3e71b8e8126 162 Pfam PF04985 Phage tail tube protein FII 9 159 3.3E-10 T 14-10-2018 IPR006498 Tail tube protein JV59_38395 d67e84f518714ea1932d2a7fc5f6b4ef 80 Gene3D G3DSA:1.20.5.340 1 79 7.5E-28 T 14-10-2018 JV59_38395 d67e84f518714ea1932d2a7fc5f6b4ef 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 17.847 T 14-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 JV59_38395 d67e84f518714ea1932d2a7fc5f6b4ef 80 Pfam PF06005 Cell division protein ZapB 1 78 4.4E-26 T 14-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 JV59_17495 8155f5622407e08b35749e2a5f78d02f 412 Gene3D G3DSA:1.10.4160.10 2 411 3.7E-47 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily JV59_17495 8155f5622407e08b35749e2a5f78d02f 412 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 397 3.5E-61 T 14-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 JV59_24200 1811e03c03a0af1f596fdddb23626fa4 303 SUPERFAMILY SSF54106 35 80 2.62E-6 T 14-10-2018 JV59_24200 1811e03c03a0af1f596fdddb23626fa4 303 Gene3D G3DSA:2.40.440.10 17 295 5.6E-85 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like JV59_24200 1811e03c03a0af1f596fdddb23626fa4 303 Pfam PF03734 L,D-transpeptidase catalytic domain 92 227 2.4E-20 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 JV59_24200 1811e03c03a0af1f596fdddb23626fa4 303 SMART SM00257 36 80 2.3E-5 T 14-10-2018 IPR018392 LysM domain JV59_24200 1811e03c03a0af1f596fdddb23626fa4 303 SUPERFAMILY SSF141523 90 227 1.96E-29 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like JV59_24200 1811e03c03a0af1f596fdddb23626fa4 303 Pfam PF01476 LysM domain 37 80 4.4E-7 T 14-10-2018 IPR018392 LysM domain JV59_39860 cca21b758092e9cf57bedb175e09280e 222 PIRSF PIRSF006324 1 215 5.3E-51 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_39860 cca21b758092e9cf57bedb175e09280e 222 Pfam PF01810 LysE type translocator 16 212 5.1E-39 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_29955 706cad51c6c5cdbd95401dd9f5315b0a 198 Pfam PF01965 DJ-1/PfpI family 3 151 2.5E-10 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 JV59_29955 706cad51c6c5cdbd95401dd9f5315b0a 198 SUPERFAMILY SSF52317 1 174 1.05E-22 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_29955 706cad51c6c5cdbd95401dd9f5315b0a 198 Gene3D G3DSA:3.40.50.880 2 195 2.2E-32 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_23090 521c80ee9cce6e539b973c321b272f8c 409 Gene3D G3DSA:1.20.1270.180 325 408 1.2E-8 T 14-10-2018 JV59_23090 521c80ee9cce6e539b973c321b272f8c 409 Pfam PF07007 Lysozyme inhibitor LprI 328 403 2.3E-8 T 14-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal JV59_23090 521c80ee9cce6e539b973c321b272f8c 409 Gene3D G3DSA:1.25.40.10 21 159 3.1E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_23090 521c80ee9cce6e539b973c321b272f8c 409 SUPERFAMILY SSF81901 28 125 1.7E-9 T 14-10-2018 JV59_29600 916526d56cb3a2a9abaa8158c4fcf933 623 SUPERFAMILY SSF52518 1 210 6.7E-31 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_29600 916526d56cb3a2a9abaa8158c4fcf933 623 SUPERFAMILY SSF52467 181 383 1.24E-40 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JV59_29600 916526d56cb3a2a9abaa8158c4fcf933 623 Gene3D G3DSA:3.40.50.970 6 197 1.5E-28 T 14-10-2018 JV59_29600 916526d56cb3a2a9abaa8158c4fcf933 623 SUPERFAMILY SSF52518 399 584 7.67E-40 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_29600 916526d56cb3a2a9abaa8158c4fcf933 623 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 425 575 1.1E-24 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JV59_29600 916526d56cb3a2a9abaa8158c4fcf933 623 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 196 1.7E-34 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 JV59_29600 916526d56cb3a2a9abaa8158c4fcf933 623 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 220 353 1.3E-30 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 JV59_29600 916526d56cb3a2a9abaa8158c4fcf933 623 Gene3D G3DSA:3.40.50.970 396 589 1.8E-33 T 14-10-2018 JV59_29600 916526d56cb3a2a9abaa8158c4fcf933 623 Gene3D G3DSA:3.40.50.1220 212 394 2.4E-36 T 14-10-2018 JV59_29600 916526d56cb3a2a9abaa8158c4fcf933 623 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 5 620 2.0E-264 T 14-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 JV59_23225 0e50c35875632c2b5ee35095754ffdef 258 SMART SM00342 170 252 5.5E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_23225 0e50c35875632c2b5ee35095754ffdef 258 Pfam PF02311 AraC-like ligand binding domain 18 93 1.1E-4 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 JV59_23225 0e50c35875632c2b5ee35095754ffdef 258 Gene3D G3DSA:1.10.10.60 213 257 5.5E-7 T 14-10-2018 JV59_23225 0e50c35875632c2b5ee35095754ffdef 258 SUPERFAMILY SSF46689 206 253 7.62E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_23225 0e50c35875632c2b5ee35095754ffdef 258 SUPERFAMILY SSF51182 29 92 1.93E-6 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JV59_23225 0e50c35875632c2b5ee35095754ffdef 258 Pfam PF12833 Helix-turn-helix domain 176 252 2.4E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_23225 0e50c35875632c2b5ee35095754ffdef 258 Gene3D G3DSA:1.10.10.60 161 212 1.1E-8 T 14-10-2018 JV59_28070 fd9cdeca8199eb06c773bee4b723198f 708 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 123 608 4.4E-70 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit JV59_28070 fd9cdeca8199eb06c773bee4b723198f 708 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 24 694 8.0E-206 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ JV59_28845 2d9446401277ae8f5221dbb63accf2b7 286 Pfam PF01435 Peptidase family M48 78 285 5.0E-38 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 JV59_28845 2d9446401277ae8f5221dbb63accf2b7 286 Hamap MF_00188 Protease HtpX [htpX]. 1 286 24.665 T 14-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 JV59_28845 2d9446401277ae8f5221dbb63accf2b7 286 Gene3D G3DSA:3.30.2010.10 68 161 4.2E-37 T 14-10-2018 JV59_26815 ff93a3156638646c80274f2ce654354c 147 Pfam PF05618 Putative ATP-dependant zinc protease 7 140 1.5E-46 T 14-10-2018 JV59_26815 ff93a3156638646c80274f2ce654354c 147 Gene3D G3DSA:2.40.70.10 3 133 4.3E-35 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily JV59_26815 ff93a3156638646c80274f2ce654354c 147 SUPERFAMILY SSF50630 6 140 5.35E-45 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily JV59_30130 a27efd18519e573ec55b3c6ecff206f0 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 23 98 9.5E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_30130 a27efd18519e573ec55b3c6ecff206f0 219 Gene3D G3DSA:1.10.10.10 6 115 3.7E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_30130 a27efd18519e573ec55b3c6ecff206f0 219 SUPERFAMILY SSF46894 7 100 1.36E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_30130 a27efd18519e573ec55b3c6ecff206f0 219 SMART SM00862 23 98 2.1E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_27185 f1d4a9e9f72b7c5cecc7f8d7f61884a4 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.5E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_27185 f1d4a9e9f72b7c5cecc7f8d7f61884a4 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 2.5E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_27185 f1d4a9e9f72b7c5cecc7f8d7f61884a4 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 2.5E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_27185 f1d4a9e9f72b7c5cecc7f8d7f61884a4 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 2.5E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_27185 f1d4a9e9f72b7c5cecc7f8d7f61884a4 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 2.5E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_27185 f1d4a9e9f72b7c5cecc7f8d7f61884a4 275 SUPERFAMILY SSF51735 2 247 1.08E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_27185 f1d4a9e9f72b7c5cecc7f8d7f61884a4 275 Pfam PF00106 short chain dehydrogenase 3 187 3.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_27185 f1d4a9e9f72b7c5cecc7f8d7f61884a4 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 1.0E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_27185 f1d4a9e9f72b7c5cecc7f8d7f61884a4 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 1.0E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_27185 f1d4a9e9f72b7c5cecc7f8d7f61884a4 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 1.0E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_27185 f1d4a9e9f72b7c5cecc7f8d7f61884a4 275 Gene3D G3DSA:3.40.50.720 2 262 6.4E-59 T 14-10-2018 JV59_27185 f1d4a9e9f72b7c5cecc7f8d7f61884a4 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JV59_21910 e2779831fe36390941d218f895fe52bd 317 Pfam PF07859 alpha/beta hydrolase fold 77 285 2.0E-64 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 JV59_21910 e2779831fe36390941d218f895fe52bd 317 Gene3D G3DSA:3.40.50.1820 41 310 1.2E-75 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_21910 e2779831fe36390941d218f895fe52bd 317 SUPERFAMILY SSF53474 58 312 1.05E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_36255 1f0104967c7e92e831bac570a4966925 150 Pfam PF04074 Domain of unknown function (DUF386) 4 140 4.9E-24 T 14-10-2018 IPR004375 YhcH/YjgK/YiaL family JV59_36255 1f0104967c7e92e831bac570a4966925 150 SUPERFAMILY SSF51197 1 143 1.9E-23 T 14-10-2018 JV59_36255 1f0104967c7e92e831bac570a4966925 150 Gene3D G3DSA:2.60.120.370 1 143 4.8E-15 T 14-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily JV59_21405 8aee61f65065d7fe73c4088cab57e026 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 24 249 7.4E-55 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_21405 8aee61f65065d7fe73c4088cab57e026 257 SUPERFAMILY SSF53850 1 252 7.27E-60 T 14-10-2018 JV59_21405 8aee61f65065d7fe73c4088cab57e026 257 SMART SM00062 23 251 3.7E-61 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_21405 8aee61f65065d7fe73c4088cab57e026 257 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site JV59_21405 8aee61f65065d7fe73c4088cab57e026 257 Gene3D G3DSA:3.40.190.10 109 208 2.7E-69 T 14-10-2018 JV59_21405 8aee61f65065d7fe73c4088cab57e026 257 Gene3D G3DSA:3.40.190.10 26 247 2.7E-69 T 14-10-2018 JV59_26780 94acf10b5929b43ec7992b72641e097e 261 SMART SM00900 148 246 2.3E-31 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 JV59_26780 94acf10b5929b43ec7992b72641e097e 261 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 254 3.7E-94 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 JV59_26780 94acf10b5929b43ec7992b72641e097e 261 Pfam PF04205 FMN-binding domain 148 243 1.6E-13 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 JV59_26780 94acf10b5929b43ec7992b72641e097e 261 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 258 35.565 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 JV59_26780 94acf10b5929b43ec7992b72641e097e 261 PIRSF PIRSF009437 1 261 3.2E-103 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 JV59_21035 08fbab48364a16ed54a16fc381bb1c82 338 Gene3D G3DSA:3.10.450.50 5 150 1.4E-22 T 14-10-2018 JV59_21035 08fbab48364a16ed54a16fc381bb1c82 338 Gene3D G3DSA:3.10.450.50 206 332 4.5E-11 T 14-10-2018 JV59_21035 08fbab48364a16ed54a16fc381bb1c82 338 SUPERFAMILY SSF54427 184 328 3.55E-16 T 14-10-2018 IPR032710 NTF2-like domain superfamily JV59_21035 08fbab48364a16ed54a16fc381bb1c82 338 Pfam PF12680 SnoaL-like domain 11 132 3.9E-9 T 14-10-2018 IPR037401 SnoaL-like domain JV59_21035 08fbab48364a16ed54a16fc381bb1c82 338 SUPERFAMILY SSF54427 5 153 7.58E-26 T 14-10-2018 IPR032710 NTF2-like domain superfamily JV59_38670 de05939d9b2ea853cf2834c838761e4f 401 Gene3D G3DSA:3.40.50.1950 1 184 1.1E-54 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 JV59_38670 de05939d9b2ea853cf2834c838761e4f 401 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 395 2.8E-150 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 JV59_38670 de05939d9b2ea853cf2834c838761e4f 401 Gene3D G3DSA:3.40.50.10300 185 401 5.2E-84 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 JV59_38670 de05939d9b2ea853cf2834c838761e4f 401 SUPERFAMILY SSF52507 1 182 8.9E-61 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 JV59_38670 de05939d9b2ea853cf2834c838761e4f 401 SUPERFAMILY SSF102645 184 400 1.28E-80 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 JV59_38670 de05939d9b2ea853cf2834c838761e4f 401 Pfam PF02441 Flavoprotein 7 178 2.6E-43 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 JV59_38670 de05939d9b2ea853cf2834c838761e4f 401 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 370 1.4E-75 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 JV59_20530 70d8f80aabe3170a323b01a3b86813b2 347 Gene3D G3DSA:3.40.190.10 26 327 1.4E-120 T 14-10-2018 JV59_20530 70d8f80aabe3170a323b01a3b86813b2 347 Gene3D G3DSA:3.40.190.10 100 280 1.4E-120 T 14-10-2018 JV59_20530 70d8f80aabe3170a323b01a3b86813b2 347 SUPERFAMILY SSF53850 25 336 3.0E-96 T 14-10-2018 JV59_20530 70d8f80aabe3170a323b01a3b86813b2 347 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 26 335 1.3E-113 T 14-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 JV59_20530 70d8f80aabe3170a323b01a3b86813b2 347 Pfam PF12849 PBP superfamily domain 23 309 2.4E-65 T 14-10-2018 IPR024370 PBP domain JV59_20530 70d8f80aabe3170a323b01a3b86813b2 347 PIRSF PIRSF002756 3 338 4.3E-104 T 14-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 JV59_20860 939fc9a59aefc574c9211724ad997486 423 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 135 406 7.4E-71 T 14-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 JV59_20860 939fc9a59aefc574c9211724ad997486 423 SUPERFAMILY SSF101960 24 416 2.35E-92 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily JV59_20860 939fc9a59aefc574c9211724ad997486 423 Pfam PF01458 Uncharacterized protein family (UPF0051) 170 391 3.7E-61 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 JV59_38085 79ed9def050c164a27274112de018d8c 435 PIRSF PIRSF004539 1 435 1.7E-177 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 JV59_38085 79ed9def050c164a27274112de018d8c 435 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 434 3.6E-180 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 JV59_38085 79ed9def050c164a27274112de018d8c 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 367 6.7E-145 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 JV59_20180 4979f83a66ea0b9e50d75d9f3086cf09 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 190 2.6E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_20180 4979f83a66ea0b9e50d75d9f3086cf09 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 206 218 2.6E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_20180 4979f83a66ea0b9e50d75d9f3086cf09 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 190 206 2.6E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_20180 4979f83a66ea0b9e50d75d9f3086cf09 240 ProSitePatterns PS00622 LuxR-type HTH domain signature. 190 217 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_20180 4979f83a66ea0b9e50d75d9f3086cf09 240 SUPERFAMILY SSF75516 3 164 3.53E-22 T 14-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily JV59_20180 4979f83a66ea0b9e50d75d9f3086cf09 240 SMART SM00421 173 230 8.8E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_20180 4979f83a66ea0b9e50d75d9f3086cf09 240 Pfam PF03472 Autoinducer binding domain 18 135 4.7E-16 T 14-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain JV59_20180 4979f83a66ea0b9e50d75d9f3086cf09 240 Gene3D G3DSA:3.30.450.80 2 163 8.8E-20 T 14-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily JV59_20180 4979f83a66ea0b9e50d75d9f3086cf09 240 SUPERFAMILY SSF46894 166 235 1.8E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_20180 4979f83a66ea0b9e50d75d9f3086cf09 240 Gene3D G3DSA:1.10.10.10 169 236 3.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_20180 4979f83a66ea0b9e50d75d9f3086cf09 240 Pfam PF00196 Bacterial regulatory proteins, luxR family 175 229 2.3E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_39675 b92e85ee31d69d70c33e69f9545b9e28 296 SUPERFAMILY SSF46785 1 87 4.67E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_39675 b92e85ee31d69d70c33e69f9545b9e28 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.6E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_39675 b92e85ee31d69d70c33e69f9545b9e28 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.6E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_39675 b92e85ee31d69d70c33e69f9545b9e28 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.6E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_39675 b92e85ee31d69d70c33e69f9545b9e28 296 Gene3D G3DSA:3.40.190.10 91 287 2.0E-28 T 14-10-2018 JV59_39675 b92e85ee31d69d70c33e69f9545b9e28 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.7E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_39675 b92e85ee31d69d70c33e69f9545b9e28 296 Gene3D G3DSA:3.40.190.10 165 265 2.0E-28 T 14-10-2018 JV59_39675 b92e85ee31d69d70c33e69f9545b9e28 296 SUPERFAMILY SSF53850 88 292 2.38E-32 T 14-10-2018 JV59_39675 b92e85ee31d69d70c33e69f9545b9e28 296 Gene3D G3DSA:1.10.10.10 1 90 5.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_39675 b92e85ee31d69d70c33e69f9545b9e28 296 Pfam PF03466 LysR substrate binding domain 87 291 4.0E-37 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_23880 e5bbd2223a56278eb0d62e6d124834bb 258 SUPERFAMILY SSF74853 45 146 4.84E-15 T 14-10-2018 IPR036415 Lamin tail domain superfamily JV59_23880 e5bbd2223a56278eb0d62e6d124834bb 258 Pfam PF00932 Lamin Tail Domain 150 258 6.4E-16 T 14-10-2018 IPR001322 Lamin tail domain JV59_23880 e5bbd2223a56278eb0d62e6d124834bb 258 Pfam PF00932 Lamin Tail Domain 44 146 3.9E-14 T 14-10-2018 IPR001322 Lamin tail domain JV59_23880 e5bbd2223a56278eb0d62e6d124834bb 258 Gene3D G3DSA:2.60.40.1260 38 145 4.5E-6 T 14-10-2018 IPR036415 Lamin tail domain superfamily JV59_23880 e5bbd2223a56278eb0d62e6d124834bb 258 SUPERFAMILY SSF74853 167 258 9.16E-15 T 14-10-2018 IPR036415 Lamin tail domain superfamily JV59_00205 b7394baaac1d9335cea897f603f61dce 307 PIRSF PIRSF000545 1 307 9.1E-143 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 JV59_00205 b7394baaac1d9335cea897f603f61dce 307 Hamap MF_00215 Pantothenate kinase [coaA]. 1 307 173.382 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 JV59_00205 b7394baaac1d9335cea897f603f61dce 307 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 82 234 6.9E-12 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 JV59_00205 b7394baaac1d9335cea897f603f61dce 307 Gene3D G3DSA:3.40.50.300 1 307 3.0E-91 T 14-10-2018 JV59_00205 b7394baaac1d9335cea897f603f61dce 307 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 2 307 4.0E-145 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 JV59_00205 b7394baaac1d9335cea897f603f61dce 307 SUPERFAMILY SSF52540 2 307 2.12E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_38545 00d1e7892de4dd95b70d708c42edc62e 251 Gene3D G3DSA:3.90.550.10 1 224 3.9E-37 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_38545 00d1e7892de4dd95b70d708c42edc62e 251 Pfam PF02348 Cytidylyltransferase 4 201 3.1E-33 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 JV59_38545 00d1e7892de4dd95b70d708c42edc62e 251 SUPERFAMILY SSF53448 1 208 2.93E-31 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_31770 f59be890a5eafb6e03eef009c6740806 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 357 4.3E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_31770 f59be890a5eafb6e03eef009c6740806 365 Gene3D G3DSA:1.10.3720.10 147 363 9.1E-49 T 14-10-2018 IPR035906 MetI-like superfamily JV59_31770 f59be890a5eafb6e03eef009c6740806 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 6.6E-22 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 JV59_31770 f59be890a5eafb6e03eef009c6740806 365 SUPERFAMILY SSF161098 155 346 1.7E-40 T 14-10-2018 IPR035906 MetI-like superfamily JV59_17195 3349948c098a1008bc7a2deb80e93371 98 Gene3D G3DSA:3.30.70.100 1 98 3.1E-36 T 14-10-2018 JV59_17195 3349948c098a1008bc7a2deb80e93371 98 SMART SM00886 2 98 7.0E-33 T 14-10-2018 IPR013097 Stress responsive alpha-beta barrel JV59_17195 3349948c098a1008bc7a2deb80e93371 98 Pfam PF07876 Stress responsive A/B Barrel Domain 2 98 3.5E-31 T 14-10-2018 IPR013097 Stress responsive alpha-beta barrel JV59_17195 3349948c098a1008bc7a2deb80e93371 98 SUPERFAMILY SSF54909 2 98 4.47E-30 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_01535 04137c97052f4997b7860072186b8b41 456 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 23 451 1.9E-160 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 JV59_01535 04137c97052f4997b7860072186b8b41 456 Pfam PF12626 Polymerase A arginine-rich C-terminus 329 447 1.5E-38 T 14-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain JV59_01535 04137c97052f4997b7860072186b8b41 456 Gene3D G3DSA:1.10.3090.10 181 431 1.2E-92 T 14-10-2018 JV59_01535 04137c97052f4997b7860072186b8b41 456 SUPERFAMILY SSF81891 181 418 2.09E-47 T 14-10-2018 JV59_01535 04137c97052f4997b7860072186b8b41 456 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 9 447 37.521 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 JV59_01535 04137c97052f4997b7860072186b8b41 456 SUPERFAMILY SSF81301 25 180 5.23E-40 T 14-10-2018 JV59_01535 04137c97052f4997b7860072186b8b41 456 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 210 270 2.6E-21 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 JV59_01535 04137c97052f4997b7860072186b8b41 456 Pfam PF01743 Poly A polymerase head domain 54 183 3.5E-37 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 JV59_01535 04137c97052f4997b7860072186b8b41 456 Gene3D G3DSA:3.30.460.10 20 179 7.2E-62 T 14-10-2018 JV59_16515 39dfba257d0c6f3cfd9cffc30f2ffc42 272 Gene3D G3DSA:2.60.40.3880 27 154 3.6E-49 T 14-10-2018 JV59_16515 39dfba257d0c6f3cfd9cffc30f2ffc42 272 Gene3D G3DSA:2.60.40.3880 155 266 9.5E-36 T 14-10-2018 JV59_31230 cffc5d865216b9a7f2544f89c941c9bb 159 Gene3D G3DSA:1.25.40.10 10 159 3.4E-36 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_31230 cffc5d865216b9a7f2544f89c941c9bb 159 PIRSF PIRSF003165 1 159 1.8E-35 T 14-10-2018 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup JV59_31230 cffc5d865216b9a7f2544f89c941c9bb 159 SUPERFAMILY SSF48452 42 136 3.8E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_21635 16ef08936fbc31a8c070a0bf49433b75 95 Pfam PF14542 GCN5-related N-acetyl-transferase 18 89 1.8E-19 T 14-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase JV59_21635 16ef08936fbc31a8c070a0bf49433b75 95 Gene3D G3DSA:3.40.630.30 3 94 8.1E-19 T 14-10-2018 JV59_21635 16ef08936fbc31a8c070a0bf49433b75 95 SUPERFAMILY SSF55729 5 92 1.39E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_22835 f0ca39e4e9014afa55167966b59d0d89 183 SUPERFAMILY SSF55729 3 174 2.7E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_22835 f0ca39e4e9014afa55167966b59d0d89 183 Gene3D G3DSA:3.40.630.30 1 177 2.0E-23 T 14-10-2018 JV59_22835 f0ca39e4e9014afa55167966b59d0d89 183 Pfam PF00583 Acetyltransferase (GNAT) family 66 151 1.4E-9 T 14-10-2018 IPR000182 GNAT domain JV59_36640 5928ea574f430bf1045e27aeb705ab44 321 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 6 290 1.1E-97 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 JV59_36640 5928ea574f430bf1045e27aeb705ab44 321 Gene3D G3DSA:3.40.50.11270 16 100 7.4E-108 T 14-10-2018 JV59_36640 5928ea574f430bf1045e27aeb705ab44 321 Pfam PF02401 LytB protein 7 288 1.2E-91 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 JV59_36640 5928ea574f430bf1045e27aeb705ab44 321 Gene3D G3DSA:3.40.1010.20 10 287 7.4E-108 T 14-10-2018 JV59_36640 5928ea574f430bf1045e27aeb705ab44 321 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 5 292 37.859 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 JV59_36640 5928ea574f430bf1045e27aeb705ab44 321 Gene3D G3DSA:3.40.1010.20 101 202 7.4E-108 T 14-10-2018 JV59_29480 c3f8d8a9711b09f49756f636d6238c22 148 Gene3D G3DSA:1.10.357.10 42 148 9.7E-15 T 14-10-2018 JV59_29480 c3f8d8a9711b09f49756f636d6238c22 148 SUPERFAMILY SSF46689 51 97 2.41E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_29480 c3f8d8a9711b09f49756f636d6238c22 148 Pfam PF00440 Bacterial regulatory proteins, tetR family 51 78 1.2E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_35380 3e05ff3c60c1e04ef8b0a31b3b6df593 756 Gene3D G3DSA:1.25.40.10 323 493 1.2E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_35380 3e05ff3c60c1e04ef8b0a31b3b6df593 756 Gene3D G3DSA:1.25.40.10 252 322 6.3E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_35380 3e05ff3c60c1e04ef8b0a31b3b6df593 756 SMART SM00028 332 365 46.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_35380 3e05ff3c60c1e04ef8b0a31b3b6df593 756 SMART SM00028 86 119 7.3 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_35380 3e05ff3c60c1e04ef8b0a31b3b6df593 756 SMART SM00028 252 285 35.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_35380 3e05ff3c60c1e04ef8b0a31b3b6df593 756 SMART SM00028 292 325 0.042 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_35380 3e05ff3c60c1e04ef8b0a31b3b6df593 756 SUPERFAMILY SSF48452 155 363 3.8E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_35380 3e05ff3c60c1e04ef8b0a31b3b6df593 756 Gene3D G3DSA:1.25.40.10 74 241 3.1E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_39330 ad6ae0e23565dd3e7f8e1ae4246aa28d 513 SUPERFAMILY SSF50615 10 94 3.73E-26 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_39330 ad6ae0e23565dd3e7f8e1ae4246aa28d 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 5.5E-14 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_39330 ad6ae0e23565dd3e7f8e1ae4246aa28d 513 Gene3D G3DSA:3.40.50.300 94 382 3.4E-129 T 14-10-2018 JV59_39330 ad6ae0e23565dd3e7f8e1ae4246aa28d 513 SUPERFAMILY SSF47917 383 511 1.12E-45 T 14-10-2018 JV59_39330 ad6ae0e23565dd3e7f8e1ae4246aa28d 513 SUPERFAMILY SSF52540 96 381 3.99E-93 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_39330 ad6ae0e23565dd3e7f8e1ae4246aa28d 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 2.1E-44 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39330 ad6ae0e23565dd3e7f8e1ae4246aa28d 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_39330 ad6ae0e23565dd3e7f8e1ae4246aa28d 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.593 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39330 ad6ae0e23565dd3e7f8e1ae4246aa28d 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 6.4E-71 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_39330 ad6ae0e23565dd3e7f8e1ae4246aa28d 513 Gene3D G3DSA:1.20.150.20 383 513 2.7E-48 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39330 ad6ae0e23565dd3e7f8e1ae4246aa28d 513 Gene3D G3DSA:2.40.30.20 1 93 5.8E-30 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_39330 ad6ae0e23565dd3e7f8e1ae4246aa28d 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 3.2E-250 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_28755 883046787252f3658edded4b1ff22b38 136 Pfam PF04138 GtrA-like protein 7 126 9.4E-22 T 14-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 JV59_38365 f7bd250c3f977cf86178b1ff57dbe8e1 72 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 2.5E-35 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_38365 f7bd250c3f977cf86178b1ff57dbe8e1 72 SUPERFAMILY SSF143800 1 68 1.96E-27 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_38365 f7bd250c3f977cf86178b1ff57dbe8e1 72 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 32.316 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_38365 f7bd250c3f977cf86178b1ff57dbe8e1 72 PRINTS PR01249 Ribosomal protein L31 signature 32 47 5.3E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_38365 f7bd250c3f977cf86178b1ff57dbe8e1 72 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.3E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_38365 f7bd250c3f977cf86178b1ff57dbe8e1 72 PRINTS PR01249 Ribosomal protein L31 signature 47 65 5.3E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_38365 f7bd250c3f977cf86178b1ff57dbe8e1 72 Gene3D G3DSA:2.30.170.50 1 71 1.0E-33 T 14-10-2018 JV59_38365 f7bd250c3f977cf86178b1ff57dbe8e1 72 Pfam PF01197 Ribosomal protein L31 1 66 5.4E-33 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_38365 f7bd250c3f977cf86178b1ff57dbe8e1 72 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_28735 4596cb26f6a0eebee3a880f65041debe 422 Pfam PF00512 His Kinase A (phospho-acceptor) domain 229 290 2.0E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_28735 4596cb26f6a0eebee3a880f65041debe 422 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 420 1.5E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_28735 4596cb26f6a0eebee3a880f65041debe 422 Gene3D G3DSA:3.30.565.10 303 422 5.4E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_28735 4596cb26f6a0eebee3a880f65041debe 422 SMART SM00388 227 292 9.3E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_28735 4596cb26f6a0eebee3a880f65041debe 422 Gene3D G3DSA:1.10.287.130 177 293 7.2E-19 T 14-10-2018 JV59_28735 4596cb26f6a0eebee3a880f65041debe 422 SMART SM00387 336 422 2.0E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_28735 4596cb26f6a0eebee3a880f65041debe 422 SUPERFAMILY SSF55874 302 422 1.1E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_28735 4596cb26f6a0eebee3a880f65041debe 422 SUPERFAMILY SSF47384 210 291 3.34E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_27240 f86c739223488101e8af65253f4d72ee 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JV59_27240 f86c739223488101e8af65253f4d72ee 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.692 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JV59_27240 f86c739223488101e8af65253f4d72ee 214 PRINTS PR00094 Adenylate kinase signature 4 17 6.2E-36 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JV59_27240 f86c739223488101e8af65253f4d72ee 214 PRINTS PR00094 Adenylate kinase signature 32 46 6.2E-36 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JV59_27240 f86c739223488101e8af65253f4d72ee 214 PRINTS PR00094 Adenylate kinase signature 156 171 6.2E-36 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JV59_27240 f86c739223488101e8af65253f4d72ee 214 PRINTS PR00094 Adenylate kinase signature 173 187 6.2E-36 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JV59_27240 f86c739223488101e8af65253f4d72ee 214 PRINTS PR00094 Adenylate kinase signature 81 97 6.2E-36 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JV59_27240 f86c739223488101e8af65253f4d72ee 214 Gene3D G3DSA:3.40.50.300 1 214 9.4E-78 T 14-10-2018 JV59_27240 f86c739223488101e8af65253f4d72ee 214 Pfam PF00406 Adenylate kinase 5 185 1.0E-59 T 14-10-2018 JV59_27240 f86c739223488101e8af65253f4d72ee 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 9.0E-15 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 JV59_27240 f86c739223488101e8af65253f4d72ee 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 3.8E-75 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 JV59_27240 f86c739223488101e8af65253f4d72ee 214 SUPERFAMILY SSF52540 1 191 2.77E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_36325 eb5ba88d0694f3e6e4e6954d92e59b45 314 Pfam PF00482 Type II secretion system (T2SS), protein F 173 300 1.0E-22 T 14-10-2018 IPR018076 Type II secretion system F domain JV59_36325 eb5ba88d0694f3e6e4e6954d92e59b45 314 Gene3D G3DSA:1.20.81.30 169 278 1.9E-6 T 14-10-2018 JV59_27875 0502c2e453e20c820f2d7293aad0a99d 113 Gene3D G3DSA:1.20.120.160 1 110 3.5E-23 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_27875 0502c2e453e20c820f2d7293aad0a99d 113 SUPERFAMILY SSF47226 2 110 2.09E-20 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_27875 0502c2e453e20c820f2d7293aad0a99d 113 Pfam PF01627 Hpt domain 24 104 9.4E-8 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 JV59_21975 966805f918c2874da09d8d3ca96ff2d5 306 Pfam PF13523 Acetyltransferase (GNAT) domain 142 285 6.9E-50 T 14-10-2018 JV59_21975 966805f918c2874da09d8d3ca96ff2d5 306 Gene3D G3DSA:3.40.630.30 101 300 2.4E-62 T 14-10-2018 JV59_21975 966805f918c2874da09d8d3ca96ff2d5 306 SMART SM01006 138 185 3.6E-15 T 14-10-2018 IPR019432 Siderophore biosynthesis protein, conserved domain JV59_21975 966805f918c2874da09d8d3ca96ff2d5 306 SUPERFAMILY SSF55729 107 299 1.59E-58 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_17840 5bac94b43124dc62e0a6fdfa1ca91d2a 263 SUPERFAMILY SSF56534 3 244 1.96E-97 T 14-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily JV59_17840 5bac94b43124dc62e0a6fdfa1ca91d2a 263 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 115 126 - T 14-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 JV59_17840 5bac94b43124dc62e0a6fdfa1ca91d2a 263 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 14 230 2.7E-46 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 JV59_17840 5bac94b43124dc62e0a6fdfa1ca91d2a 263 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 176 194 3.2E-10 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 JV59_17840 5bac94b43124dc62e0a6fdfa1ca91d2a 263 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 72 94 3.2E-10 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 JV59_17840 5bac94b43124dc62e0a6fdfa1ca91d2a 263 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 208 227 3.2E-10 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 JV59_17840 5bac94b43124dc62e0a6fdfa1ca91d2a 263 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 11 253 2.7E-100 T 14-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 JV59_17840 5bac94b43124dc62e0a6fdfa1ca91d2a 263 Gene3D G3DSA:1.10.800.10 1 263 3.3E-98 T 14-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 JV59_35570 11c53619fd46210d769226cd8923cced 391 Pfam PF01180 Dihydroorotate dehydrogenase 63 357 4.7E-66 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 JV59_35570 11c53619fd46210d769226cd8923cced 391 Gene3D G3DSA:3.20.20.70 12 374 6.0E-103 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_35570 11c53619fd46210d769226cd8923cced 391 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 16 371 6.8E-86 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 JV59_35570 11c53619fd46210d769226cd8923cced 391 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 309 329 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 JV59_35570 11c53619fd46210d769226cd8923cced 391 SUPERFAMILY SSF51395 15 372 6.41E-69 T 14-10-2018 JV59_39600 c761043bc6ace1d3858102ec13e74208 201 Gene3D G3DSA:3.30.1050.10 7 119 6.0E-6 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily JV59_39600 c761043bc6ace1d3858102ec13e74208 201 SUPERFAMILY SSF55718 15 117 2.59E-10 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily JV59_39600 c761043bc6ace1d3858102ec13e74208 201 Pfam PF02036 SCP-2 sterol transfer family 15 111 1.3E-23 T 14-10-2018 IPR003033 SCP2 sterol-binding domain JV59_27220 47744add9ce58a7960e915b038f9c79d 92 Gene3D G3DSA:3.40.30.10 1 92 1.5E-40 T 14-10-2018 JV59_27220 47744add9ce58a7960e915b038f9c79d 92 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 77 1.4E-24 T 14-10-2018 IPR011893 Selenoprotein, Rdx-type JV59_27220 47744add9ce58a7960e915b038f9c79d 92 SUPERFAMILY SSF52833 4 87 1.12E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_27220 47744add9ce58a7960e915b038f9c79d 92 Pfam PF10262 Rdx family 5 78 6.4E-32 T 14-10-2018 IPR011893 Selenoprotein, Rdx-type JV59_18830 80b66353475a17dc643540b0186f1646 186 Gene3D G3DSA:3.40.630.30 2 170 1.4E-27 T 14-10-2018 JV59_18830 80b66353475a17dc643540b0186f1646 186 SUPERFAMILY SSF55729 1 160 3.49E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_18830 80b66353475a17dc643540b0186f1646 186 Pfam PF00583 Acetyltransferase (GNAT) family 41 139 1.1E-13 T 14-10-2018 IPR000182 GNAT domain JV59_29800 820bdb46196680de5228bbd1f238357f 132 SUPERFAMILY SSF55298 13 128 2.98E-29 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_29800 820bdb46196680de5228bbd1f238357f 132 Pfam PF01042 Endoribonuclease L-PSP 18 126 2.9E-22 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 JV59_29800 820bdb46196680de5228bbd1f238357f 132 Gene3D G3DSA:3.30.1330.40 9 127 2.4E-28 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_16585 ee6b5e222b8b2c5b3b21077eb5af8853 619 SMART SM00267 169 334 2.5E-31 T 14-10-2018 IPR000160 GGDEF domain JV59_16585 ee6b5e222b8b2c5b3b21077eb5af8853 619 SUPERFAMILY SSF55781 26 168 1.47E-6 T 14-10-2018 JV59_16585 ee6b5e222b8b2c5b3b21077eb5af8853 619 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 180 333 9.7E-28 T 14-10-2018 IPR000160 GGDEF domain JV59_16585 ee6b5e222b8b2c5b3b21077eb5af8853 619 Gene3D G3DSA:3.30.70.270 174 346 8.0E-38 T 14-10-2018 JV59_16585 ee6b5e222b8b2c5b3b21077eb5af8853 619 Pfam PF00563 EAL domain 364 591 4.2E-56 T 14-10-2018 IPR001633 EAL domain JV59_16585 ee6b5e222b8b2c5b3b21077eb5af8853 619 SUPERFAMILY SSF55073 185 335 6.43E-32 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_16585 ee6b5e222b8b2c5b3b21077eb5af8853 619 Pfam PF00990 Diguanylate cyclase, GGDEF domain 181 328 3.7E-30 T 14-10-2018 IPR000160 GGDEF domain JV59_16585 ee6b5e222b8b2c5b3b21077eb5af8853 619 SUPERFAMILY SSF141868 361 603 4.84E-69 T 14-10-2018 IPR035919 EAL domain superfamily JV59_16585 ee6b5e222b8b2c5b3b21077eb5af8853 619 SMART SM00052 340 596 7.5E-69 T 14-10-2018 IPR001633 EAL domain JV59_16585 ee6b5e222b8b2c5b3b21077eb5af8853 619 Gene3D G3DSA:3.20.20.450 347 606 1.4E-71 T 14-10-2018 IPR035919 EAL domain superfamily JV59_35655 5ac267e3b050749d161572943b0e1f94 213 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JV59_35655 5ac267e3b050749d161572943b0e1f94 213 SUPERFAMILY SSF53328 4 200 4.06E-66 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JV59_35655 5ac267e3b050749d161572943b0e1f94 213 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.756 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 JV59_35655 5ac267e3b050749d161572943b0e1f94 213 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 191 5.6E-79 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 JV59_35655 5ac267e3b050749d161572943b0e1f94 213 Pfam PF00551 Formyl transferase 3 182 1.3E-65 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JV59_35655 5ac267e3b050749d161572943b0e1f94 213 Gene3D G3DSA:3.40.50.170 3 213 3.1E-87 T 14-10-2018 JV59_37855 0ff9611dd91cb36e3e5c7e6351a924b4 179 SUPERFAMILY SSF55282 4 179 1.13E-78 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37855 0ff9611dd91cb36e3e5c7e6351a924b4 179 PIRSF PIRSF002161 1 179 4.2E-66 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37855 0ff9611dd91cb36e3e5c7e6351a924b4 179 Gene3D G3DSA:3.30.1440.10 1 179 6.1E-81 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37855 0ff9611dd91cb36e3e5c7e6351a924b4 179 Pfam PF00281 Ribosomal protein L5 24 80 3.5E-29 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37855 0ff9611dd91cb36e3e5c7e6351a924b4 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.015 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_37855 0ff9611dd91cb36e3e5c7e6351a924b4 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 7.1E-41 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37855 0ff9611dd91cb36e3e5c7e6351a924b4 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_28930 36fce0468b54fb144763b513cea44ff1 346 SUPERFAMILY SSF53383 9 343 4.95E-74 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_28930 36fce0468b54fb144763b513cea44ff1 346 Gene3D G3DSA:3.40.640.10 49 253 1.1E-119 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_28930 36fce0468b54fb144763b513cea44ff1 346 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 2.0E-117 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 JV59_28930 36fce0468b54fb144763b513cea44ff1 346 Gene3D G3DSA:3.90.1150.10 4 336 1.1E-119 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_28930 36fce0468b54fb144763b513cea44ff1 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 JV59_28930 36fce0468b54fb144763b513cea44ff1 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 52.659 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 JV59_28930 36fce0468b54fb144763b513cea44ff1 346 Pfam PF00155 Aminotransferase class I and II 42 337 8.0E-56 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JV59_02805 c4ff410ed969c0b5b3f100bf99b64e38 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 2.6E-29 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 JV59_02805 c4ff410ed969c0b5b3f100bf99b64e38 474 SMART SM00729 147 367 1.6E-61 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JV59_02805 c4ff410ed969c0b5b3f100bf99b64e38 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.011 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 JV59_02805 c4ff410ed969c0b5b3f100bf99b64e38 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 2.2E-195 T 14-10-2018 JV59_02805 c4ff410ed969c0b5b3f100bf99b64e38 474 Gene3D G3DSA:3.80.30.20 145 377 2.0E-80 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe JV59_02805 c4ff410ed969c0b5b3f100bf99b64e38 474 Pfam PF01938 TRAM domain 379 440 1.9E-18 T 14-10-2018 IPR002792 TRAM domain JV59_02805 c4ff410ed969c0b5b3f100bf99b64e38 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 JV59_02805 c4ff410ed969c0b5b3f100bf99b64e38 474 SUPERFAMILY SSF102114 122 372 5.62E-59 T 14-10-2018 JV59_02805 c4ff410ed969c0b5b3f100bf99b64e38 474 Gene3D G3DSA:3.40.50.12160 3 138 1.5E-34 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily JV59_02805 c4ff410ed969c0b5b3f100bf99b64e38 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 1.4E-150 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 JV59_02805 c4ff410ed969c0b5b3f100bf99b64e38 474 Pfam PF04055 Radical SAM superfamily 151 325 3.0E-25 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JV59_24370 557bbb7075181a490853da14df80cc1f 83 TIGRFAM TIGR03643 TIGR03643: TIGR03643 family protein 9 77 2.2E-37 T 14-10-2018 IPR019882 Conserved hypothetical protein CHP03643 JV59_24370 557bbb7075181a490853da14df80cc1f 83 Pfam PF10985 Protein of unknown function (DUF2805) 9 79 1.4E-36 T 14-10-2018 IPR019882 Conserved hypothetical protein CHP03643 JV59_28700 0d68eccf379f2a3e332ab0621f1583ef 177 SUPERFAMILY SSF49777 22 177 5.36E-48 T 14-10-2018 IPR036610 PEBP-like superfamily JV59_28700 0d68eccf379f2a3e332ab0621f1583ef 177 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 40 175 2.9E-36 T 14-10-2018 IPR005247 YbhB/YbcL JV59_28700 0d68eccf379f2a3e332ab0621f1583ef 177 Pfam PF01161 Phosphatidylethanolamine-binding protein 41 175 2.0E-36 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein JV59_28700 0d68eccf379f2a3e332ab0621f1583ef 177 Gene3D G3DSA:3.90.280.10 12 177 5.8E-51 T 14-10-2018 IPR036610 PEBP-like superfamily JV59_21890 4ce1eea2fd0c08e1b485179464be432d 332 SUPERFAMILY SSF53850 22 327 5.43E-69 T 14-10-2018 JV59_21890 4ce1eea2fd0c08e1b485179464be432d 332 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 28 310 1.8E-61 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 JV59_21890 4ce1eea2fd0c08e1b485179464be432d 332 Gene3D G3DSA:3.40.190.100 113 237 5.6E-37 T 14-10-2018 JV59_21890 4ce1eea2fd0c08e1b485179464be432d 332 Gene3D G3DSA:3.40.190.10 29 320 5.6E-37 T 14-10-2018 JV59_17160 d79f816fca6a1949f2837e6108a3ff70 318 Pfam PF01497 Periplasmic binding protein 51 291 1.6E-29 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain JV59_17160 d79f816fca6a1949f2837e6108a3ff70 318 SUPERFAMILY SSF53807 40 318 5.49E-46 T 14-10-2018 JV59_17160 d79f816fca6a1949f2837e6108a3ff70 318 Gene3D G3DSA:3.40.50.1980 144 316 3.3E-54 T 14-10-2018 JV59_17160 d79f816fca6a1949f2837e6108a3ff70 318 Gene3D G3DSA:3.40.50.1980 19 141 1.1E-23 T 14-10-2018 JV59_35265 411165718fee204ce64e41e34a7e0d10 142 SUPERFAMILY SSF160214 50 130 1.24E-23 T 14-10-2018 IPR035924 FlaG-like superfamily JV59_35265 411165718fee204ce64e41e34a7e0d10 142 Gene3D G3DSA:3.30.160.170 41 131 3.8E-14 T 14-10-2018 IPR035924 FlaG-like superfamily JV59_35265 411165718fee204ce64e41e34a7e0d10 142 Pfam PF03646 FlaG protein 38 129 5.4E-25 T 14-10-2018 IPR005186 FlaG protein JV59_27790 1a7ca2fd7264f201a377e730aec5b28d 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 6.4E-13 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JV59_27790 1a7ca2fd7264f201a377e730aec5b28d 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 6.4E-13 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JV59_27790 1a7ca2fd7264f201a377e730aec5b28d 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 6.4E-13 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JV59_27790 1a7ca2fd7264f201a377e730aec5b28d 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 3.1E-29 T 14-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 JV59_27790 1a7ca2fd7264f201a377e730aec5b28d 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 3.3E-26 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JV59_27790 1a7ca2fd7264f201a377e730aec5b28d 89 PIRSF PIRSF004669 1 89 8.1E-27 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JV59_36960 ea36b9cbc188f2a8edcd32a19ded36d2 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 18 147 1.8E-30 T 14-10-2018 JV59_36960 ea36b9cbc188f2a8edcd32a19ded36d2 156 PIRSF PIRSF004923 1 156 6.2E-37 T 14-10-2018 IPR026268 Protein RseC JV59_32805 baff4c2ad31278bfeb6a1b56f1e4afd8 185 Pfam PF00857 Isochorismatase family 4 169 9.2E-37 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 JV59_32805 baff4c2ad31278bfeb6a1b56f1e4afd8 185 SUPERFAMILY SSF52499 4 182 8.5E-38 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 JV59_32805 baff4c2ad31278bfeb6a1b56f1e4afd8 185 Gene3D G3DSA:3.40.50.850 1 185 7.0E-41 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 JV59_18650 7f334e22a5c57733485a51d6fca59026 393 SUPERFAMILY SSF53383 41 382 5.24E-69 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_18650 7f334e22a5c57733485a51d6fca59026 393 Gene3D G3DSA:3.90.1150.10 21 382 9.2E-140 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_18650 7f334e22a5c57733485a51d6fca59026 393 Pfam PF00155 Aminotransferase class I and II 47 379 6.3E-31 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JV59_18650 7f334e22a5c57733485a51d6fca59026 393 Gene3D G3DSA:3.40.640.10 59 290 9.2E-140 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_23790 4b39e53c1427093ad5651369d176bd00 90 Pfam PF11747 Killing trait 9 75 1.5E-23 T 14-10-2018 IPR021070 Killing trait, RebB JV59_40180 d5ecb4ffe7ccac8011ec74a89a7ebe50 446 Pfam PF01554 MatE 22 183 1.3E-24 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_40180 d5ecb4ffe7ccac8011ec74a89a7ebe50 446 Pfam PF01554 MatE 248 397 2.4E-13 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_40180 d5ecb4ffe7ccac8011ec74a89a7ebe50 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 416 6.1E-74 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_31765 9046311848f0b46fb88fabf00ed17b25 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 396 3.2E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_31765 9046311848f0b46fb88fabf00ed17b25 401 SUPERFAMILY SSF161098 91 162 1.1E-11 T 14-10-2018 IPR035906 MetI-like superfamily JV59_31765 9046311848f0b46fb88fabf00ed17b25 401 Gene3D G3DSA:1.10.3720.10 190 397 1.8E-31 T 14-10-2018 IPR035906 MetI-like superfamily JV59_31765 9046311848f0b46fb88fabf00ed17b25 401 Gene3D G3DSA:1.10.3720.10 79 181 3.2E-14 T 14-10-2018 IPR035906 MetI-like superfamily JV59_31765 9046311848f0b46fb88fabf00ed17b25 401 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 92 155 4.7E-17 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 JV59_31765 9046311848f0b46fb88fabf00ed17b25 401 SUPERFAMILY SSF161098 194 382 6.02E-24 T 14-10-2018 IPR035906 MetI-like superfamily JV59_23070 b04922201ea3bf252bf42e961d293081 218 Gene3D G3DSA:2.60.120.10 1 159 4.7E-65 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_23070 b04922201ea3bf252bf42e961d293081 218 Pfam PF12973 ChrR Cupin-like domain 127 211 5.2E-32 T 14-10-2018 IPR025979 ChrR-like cupin domain JV59_23070 b04922201ea3bf252bf42e961d293081 218 Pfam PF12973 ChrR Cupin-like domain 18 108 1.1E-40 T 14-10-2018 IPR025979 ChrR-like cupin domain JV59_23070 b04922201ea3bf252bf42e961d293081 218 SUPERFAMILY SSF51182 120 216 1.34E-24 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JV59_23070 b04922201ea3bf252bf42e961d293081 218 SUPERFAMILY SSF51182 2 129 4.46E-40 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JV59_27090 9495a89ab396ae9baf57bb352e75ec02 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 28.01 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 JV59_27090 9495a89ab396ae9baf57bb352e75ec02 156 SUPERFAMILY SSF75217 1 154 4.19E-51 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases JV59_27090 9495a89ab396ae9baf57bb352e75ec02 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 4.4E-49 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 JV59_27090 9495a89ab396ae9baf57bb352e75ec02 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 2.3E-78 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 JV59_27090 9495a89ab396ae9baf57bb352e75ec02 156 Gene3D G3DSA:3.40.1280.10 1 156 1.0E-52 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JV59_27090 9495a89ab396ae9baf57bb352e75ec02 156 PIRSF PIRSF004505 1 155 1.0E-43 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 JV59_35680 e203ac5a29d4cd59133bef8edefb1737 508 Gene3D G3DSA:3.40.190.10 37 275 2.5E-68 T 14-10-2018 JV59_35680 e203ac5a29d4cd59133bef8edefb1737 508 SUPERFAMILY SSF53850 44 279 4.47E-31 T 14-10-2018 JV59_35680 e203ac5a29d4cd59133bef8edefb1737 508 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 279 9.4E-26 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_35680 e203ac5a29d4cd59133bef8edefb1737 508 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 8 487 48.719 T 14-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 JV59_35680 e203ac5a29d4cd59133bef8edefb1737 508 SMART SM00062 43 280 1.2E-25 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_35680 e203ac5a29d4cd59133bef8edefb1737 508 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 321 349 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 JV59_35680 e203ac5a29d4cd59133bef8edefb1737 508 Pfam PF01464 Transglycosylase SLT domain 308 413 9.0E-21 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 JV59_35680 e203ac5a29d4cd59133bef8edefb1737 508 SUPERFAMILY SSF53955 258 462 3.0E-36 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily JV59_35680 e203ac5a29d4cd59133bef8edefb1737 508 Gene3D G3DSA:3.40.190.10 128 236 2.5E-68 T 14-10-2018 JV59_35680 e203ac5a29d4cd59133bef8edefb1737 508 Gene3D G3DSA:1.10.530.10 301 462 7.4E-34 T 14-10-2018 JV59_00190 9a3fc545901514edd2f794d8eb13582e 256 SUPERFAMILY SSF51351 2 250 4.19E-89 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_00190 9a3fc545901514edd2f794d8eb13582e 256 Gene3D G3DSA:3.20.20.70 1 256 2.9E-100 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_00190 9a3fc545901514edd2f794d8eb13582e 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 1.4E-77 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_00190 9a3fc545901514edd2f794d8eb13582e 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_00190 9a3fc545901514edd2f794d8eb13582e 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 250 59.631 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_00190 9a3fc545901514edd2f794d8eb13582e 256 Pfam PF00121 Triosephosphate isomerase 5 247 8.6E-88 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_19825 176813bc4cdd8bd8af5f767a1aabbae5 638 Gene3D G3DSA:2.170.130.10 36 142 3.1E-39 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily JV59_19825 176813bc4cdd8bd8af5f767a1aabbae5 638 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 137 2.0E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain JV59_19825 176813bc4cdd8bd8af5f767a1aabbae5 638 Pfam PF00593 TonB dependent receptor 224 636 1.3E-45 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel JV59_19825 176813bc4cdd8bd8af5f767a1aabbae5 638 Gene3D G3DSA:2.40.170.20 144 638 9.4E-122 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily JV59_19825 176813bc4cdd8bd8af5f767a1aabbae5 638 SUPERFAMILY SSF56935 41 638 1.25E-93 T 14-10-2018 JV59_19825 176813bc4cdd8bd8af5f767a1aabbae5 638 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 621 638 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site JV59_24155 e563bd60cf24b4eefd1025842c157542 129 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 2.3E-40 T 14-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 JV59_24155 e563bd60cf24b4eefd1025842c157542 129 PIRSF PIRSF028770 1 129 6.5E-70 T 14-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 JV59_38375 545313fd87b48194fe9f1083b3bcaee4 106 Gene3D G3DSA:1.10.140.10 2 105 5.0E-57 T 14-10-2018 IPR023453 Methionine repressor MetJ domain superfamily JV59_38375 545313fd87b48194fe9f1083b3bcaee4 106 Hamap MF_00744 Met repressor [metJ]. 1 105 35.123 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 JV59_38375 545313fd87b48194fe9f1083b3bcaee4 106 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 4.0E-47 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 JV59_38375 545313fd87b48194fe9f1083b3bcaee4 106 Pfam PF01340 Met Apo-repressor, MetJ 3 99 7.1E-60 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 JV59_38375 545313fd87b48194fe9f1083b3bcaee4 106 SUPERFAMILY SSF47598 3 104 2.89E-57 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 JV59_40060 2cdfbf8d6c286ab1e7f4c64cb1aa1012 163 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 109 119 - T 14-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 JV59_40060 2cdfbf8d6c286ab1e7f4c64cb1aa1012 163 Pfam PF00782 Dual specificity phosphatase, catalytic domain 32 146 5.9E-9 T 14-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 JV59_40060 2cdfbf8d6c286ab1e7f4c64cb1aa1012 163 Gene3D G3DSA:3.90.190.10 5 163 2.2E-30 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like JV59_40060 2cdfbf8d6c286ab1e7f4c64cb1aa1012 163 SUPERFAMILY SSF52799 13 159 5.71E-31 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like JV59_40060 2cdfbf8d6c286ab1e7f4c64cb1aa1012 163 SMART SM00404 67 163 0.0065 T 14-10-2018 IPR003595 Protein-tyrosine phosphatase, catalytic JV59_35160 805ff168493d2561424787d4e3e46b8e 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 3.7E-122 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JV59_35160 805ff168493d2561424787d4e3e46b8e 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 9.2E-40 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JV59_35160 805ff168493d2561424787d4e3e46b8e 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 9.2E-40 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JV59_35160 805ff168493d2561424787d4e3e46b8e 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 9.2E-40 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JV59_35160 805ff168493d2561424787d4e3e46b8e 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 9.2E-40 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JV59_35160 805ff168493d2561424787d4e3e46b8e 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 9.2E-40 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JV59_35160 805ff168493d2561424787d4e3e46b8e 376 SUPERFAMILY SSF160544 250 355 4.19E-40 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal JV59_35160 805ff168493d2561424787d4e3e46b8e 376 Gene3D G3DSA:3.40.1690.10 218 359 9.5E-58 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal JV59_35160 805ff168493d2561424787d4e3e46b8e 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 3.3E-135 T 14-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 JV59_23595 2f871640de10d911e8ba1096f11064af 195 SUPERFAMILY SSF48498 83 191 1.45E-22 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JV59_23595 2f871640de10d911e8ba1096f11064af 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 4.9E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_23595 2f871640de10d911e8ba1096f11064af 195 SUPERFAMILY SSF46689 3 70 1.21E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_23595 2f871640de10d911e8ba1096f11064af 195 Gene3D G3DSA:1.10.357.10 49 193 2.3E-26 T 14-10-2018 JV59_23595 2f871640de10d911e8ba1096f11064af 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 8.3E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_23595 2f871640de10d911e8ba1096f11064af 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 8.3E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_23595 2f871640de10d911e8ba1096f11064af 195 Gene3D G3DSA:1.10.10.60 1 47 2.5E-20 T 14-10-2018 JV59_18890 a24bed65d079bb416d3cdd0f5d3278ff 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 188 4.0E-29 T 14-10-2018 JV59_18890 a24bed65d079bb416d3cdd0f5d3278ff 215 SUPERFAMILY SSF56784 7 215 7.48E-44 T 14-10-2018 IPR036412 HAD-like superfamily JV59_18890 a24bed65d079bb416d3cdd0f5d3278ff 215 Gene3D G3DSA:3.40.50.1000 9 194 3.3E-42 T 14-10-2018 IPR023214 HAD superfamily JV59_18890 a24bed65d079bb416d3cdd0f5d3278ff 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 71 189 3.6E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_18890 a24bed65d079bb416d3cdd0f5d3278ff 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 134 150 2.3E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_18890 a24bed65d079bb416d3cdd0f5d3278ff 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 102 115 2.3E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_18890 a24bed65d079bb416d3cdd0f5d3278ff 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 152 172 2.3E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_18890 a24bed65d079bb416d3cdd0f5d3278ff 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 2.3E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_18890 a24bed65d079bb416d3cdd0f5d3278ff 215 Gene3D G3DSA:1.10.150.240 21 88 3.3E-42 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JV59_19715 987540e3991daace2f71432063817326 521 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 5 494 1.9E-86 T 14-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 JV59_19715 987540e3991daace2f71432063817326 521 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 242 493 1.4E-63 T 14-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 JV59_19715 987540e3991daace2f71432063817326 521 Pfam PF06812 ImpA, N-terminal, type VI secretion system 9 119 6.3E-26 T 14-10-2018 IPR010657 ImpA, N-terminal JV59_29325 d942c27e3283198dafca09c7911a6892 206 Pfam PF00857 Isochorismatase family 15 166 6.1E-21 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 JV59_29325 d942c27e3283198dafca09c7911a6892 206 Gene3D G3DSA:3.40.50.850 4 206 1.9E-49 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 JV59_29325 d942c27e3283198dafca09c7911a6892 206 SUPERFAMILY SSF52499 5 202 1.44E-42 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 JV59_26000 7cab843ef45972624640b96b0fdabf73 234 Pfam PF00687 Ribosomal protein L1p/L10e family 31 219 6.0E-52 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein JV59_26000 7cab843ef45972624640b96b0fdabf73 234 SUPERFAMILY SSF56808 6 225 1.11E-81 T 14-10-2018 IPR023674 Ribosomal protein L1-like JV59_26000 7cab843ef45972624640b96b0fdabf73 234 Gene3D G3DSA:3.40.50.790 68 159 3.3E-80 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich JV59_26000 7cab843ef45972624640b96b0fdabf73 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 5.0E-106 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 JV59_26000 7cab843ef45972624640b96b0fdabf73 234 Gene3D G3DSA:3.30.190.20 21 225 3.3E-80 T 14-10-2018 JV59_26000 7cab843ef45972624640b96b0fdabf73 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.864 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 JV59_26000 7cab843ef45972624640b96b0fdabf73 234 PIRSF PIRSF002155 1 227 2.2E-78 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_26000 7cab843ef45972624640b96b0fdabf73 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_29095 f3402ae208057649ff3305dcaf958e18 569 SUPERFAMILY SSF161098 5 273 7.2E-25 T 14-10-2018 IPR035906 MetI-like superfamily JV59_29095 f3402ae208057649ff3305dcaf958e18 569 Gene3D G3DSA:1.10.3720.10 3 280 6.4E-20 T 14-10-2018 IPR035906 MetI-like superfamily JV59_29095 f3402ae208057649ff3305dcaf958e18 569 Gene3D G3DSA:1.10.3720.10 298 545 4.5E-17 T 14-10-2018 IPR035906 MetI-like superfamily JV59_29095 f3402ae208057649ff3305dcaf958e18 569 SUPERFAMILY SSF161098 297 537 3.16E-22 T 14-10-2018 IPR035906 MetI-like superfamily JV59_34200 0558ecddfd685c24bc31ed88bbda53cf 603 SUPERFAMILY SSF52518 13 188 1.42E-43 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_34200 0558ecddfd685c24bc31ed88bbda53cf 603 Gene3D G3DSA:3.40.50.1220 196 378 1.7E-45 T 14-10-2018 JV59_34200 0558ecddfd685c24bc31ed88bbda53cf 603 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 201 338 2.8E-34 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 JV59_34200 0558ecddfd685c24bc31ed88bbda53cf 603 TIGRFAM TIGR03457 sulphoacet_xsc: sulfoacetaldehyde acetyltransferase 16 599 0.0 T 14-10-2018 IPR017820 Sulphoacetaldehyde acetyltransferase GO:0000287|GO:0005737|GO:0019529|GO:0030976|GO:0050487 KEGG: 00430+2.3.3.15|MetaCyc: PWY-1281|MetaCyc: PWY-6637 JV59_34200 0558ecddfd685c24bc31ed88bbda53cf 603 SUPERFAMILY SSF52467 193 375 2.91E-41 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JV59_34200 0558ecddfd685c24bc31ed88bbda53cf 603 Gene3D G3DSA:3.40.50.970 9 189 2.6E-48 T 14-10-2018 JV59_34200 0558ecddfd685c24bc31ed88bbda53cf 603 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 423 573 9.3E-36 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JV59_34200 0558ecddfd685c24bc31ed88bbda53cf 603 Gene3D G3DSA:3.40.50.970 397 585 1.7E-50 T 14-10-2018 JV59_34200 0558ecddfd685c24bc31ed88bbda53cf 603 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 16 182 1.5E-44 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 JV59_34200 0558ecddfd685c24bc31ed88bbda53cf 603 SUPERFAMILY SSF52518 401 596 1.28E-48 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_28495 1270835efeaf12b1d015d0b1694e3190 757 Gene3D G3DSA:3.40.50.300 443 656 1.2E-75 T 14-10-2018 JV59_28495 1270835efeaf12b1d015d0b1694e3190 757 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 215 328 8.6E-12 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JV59_28495 1270835efeaf12b1d015d0b1694e3190 757 SUPERFAMILY SSF52540 441 746 1.5E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_28495 1270835efeaf12b1d015d0b1694e3190 757 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 657 737 1.9E-24 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JV59_28495 1270835efeaf12b1d015d0b1694e3190 757 SMART SM01086 657 746 1.2E-36 T 14-10-2018 IPR019489 Clp ATPase, C-terminal JV59_28495 1270835efeaf12b1d015d0b1694e3190 757 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 522 540 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 JV59_28495 1270835efeaf12b1d015d0b1694e3190 757 Gene3D G3DSA:1.10.1780.10 1 143 1.4E-42 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 JV59_28495 1270835efeaf12b1d015d0b1694e3190 757 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 3.8E-13 T 14-10-2018 IPR004176 Clp, N-terminal JV59_28495 1270835efeaf12b1d015d0b1694e3190 757 Gene3D G3DSA:1.10.8.60 355 442 8.1E-35 T 14-10-2018 JV59_28495 1270835efeaf12b1d015d0b1694e3190 757 Gene3D G3DSA:1.10.8.60 657 757 1.4E-31 T 14-10-2018 JV59_28495 1270835efeaf12b1d015d0b1694e3190 757 SUPERFAMILY SSF81923 1 142 3.01E-59 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 JV59_28495 1270835efeaf12b1d015d0b1694e3190 757 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 738 0.0 T 14-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 JV59_28495 1270835efeaf12b1d015d0b1694e3190 757 Gene3D G3DSA:3.40.50.300 160 354 4.7E-63 T 14-10-2018 JV59_28495 1270835efeaf12b1d015d0b1694e3190 757 SMART SM00382 491 658 1.9E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_28495 1270835efeaf12b1d015d0b1694e3190 757 SMART SM00382 210 355 3.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_28495 1270835efeaf12b1d015d0b1694e3190 757 SUPERFAMILY SSF52540 172 430 3.73E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_28495 1270835efeaf12b1d015d0b1694e3190 757 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 306 318 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 JV59_28495 1270835efeaf12b1d015d0b1694e3190 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 566 584 4.9E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JV59_28495 1270835efeaf12b1d015d0b1694e3190 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 495 513 4.9E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JV59_28495 1270835efeaf12b1d015d0b1694e3190 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 613 4.9E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JV59_28495 1270835efeaf12b1d015d0b1694e3190 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 537 555 4.9E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 JV59_28495 1270835efeaf12b1d015d0b1694e3190 757 Pfam PF07724 AAA domain (Cdc48 subfamily) 490 651 1.4E-46 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JV59_30990 d233cc60169f5455fa7609d398d6ce1c 154 Pfam PF11749 Protein of unknown function (DUF3305) 36 144 1.2E-21 T 14-10-2018 IPR021736 Protein of unknown function DUF3305 JV59_24495 717355cd604c4ba370cdbdd24425c8a8 187 SUPERFAMILY SSF55729 88 161 2.7E-10 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_24495 717355cd604c4ba370cdbdd24425c8a8 187 Gene3D G3DSA:3.40.630.30 4 169 3.5E-39 T 14-10-2018 JV59_21450 f91544951df4c49c00b9037f45186ab6 137 SUPERFAMILY SSF52821 27 130 6.94E-22 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JV59_21450 f91544951df4c49c00b9037f45186ab6 137 SMART SM00450 30 127 8.9E-11 T 14-10-2018 IPR001763 Rhodanese-like domain JV59_21450 f91544951df4c49c00b9037f45186ab6 137 Gene3D G3DSA:3.40.250.10 11 128 2.2E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JV59_21450 f91544951df4c49c00b9037f45186ab6 137 Pfam PF00581 Rhodanese-like domain 38 122 7.6E-11 T 14-10-2018 IPR001763 Rhodanese-like domain JV59_32475 5fa9e3a80c1e7ec13118b8ab2eac900f 215 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 2 215 36.634 T 14-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 JV59_32475 5fa9e3a80c1e7ec13118b8ab2eac900f 215 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 214 8.0E-77 T 14-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 JV59_32475 5fa9e3a80c1e7ec13118b8ab2eac900f 215 PIRSF PIRSF023956 1 215 4.2E-76 T 14-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 JV59_32475 5fa9e3a80c1e7ec13118b8ab2eac900f 215 Gene3D G3DSA:3.40.50.150 1 215 2.6E-64 T 14-10-2018 JV59_32475 5fa9e3a80c1e7ec13118b8ab2eac900f 215 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 214 1.0E-81 T 14-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 JV59_32475 5fa9e3a80c1e7ec13118b8ab2eac900f 215 SUPERFAMILY SSF53335 3 213 1.69E-54 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_22270 8b6aa88ea4e79630dc066f15be8509d2 265 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 9 260 1.1E-51 T 14-10-2018 IPR000150 Cof family GO:0016787 JV59_22270 8b6aa88ea4e79630dc066f15be8509d2 265 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 231 3.4E-19 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 JV59_22270 8b6aa88ea4e79630dc066f15be8509d2 265 Gene3D G3DSA:3.40.50.1000 9 260 1.0E-78 T 14-10-2018 IPR023214 HAD superfamily JV59_22270 8b6aa88ea4e79630dc066f15be8509d2 265 Gene3D G3DSA:3.30.1240.10 85 190 1.0E-78 T 14-10-2018 JV59_22270 8b6aa88ea4e79630dc066f15be8509d2 265 Pfam PF08282 haloacid dehalogenase-like hydrolase 9 260 6.3E-59 T 14-10-2018 JV59_22270 8b6aa88ea4e79630dc066f15be8509d2 265 SUPERFAMILY SSF56784 3 264 3.82E-68 T 14-10-2018 IPR036412 HAD-like superfamily JV59_34215 2685482d0fb03e32aaeb66d5de8dc979 253 Pfam PF01925 Sulfite exporter TauE/SafE 9 243 5.2E-21 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 JV59_21445 33b984783cbd38c11f026d5e06b261d1 200 SUPERFAMILY SSF52833 1 88 1.14E-13 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_21445 33b984783cbd38c11f026d5e06b261d1 200 Gene3D G3DSA:3.40.30.10 1 82 6.6E-13 T 14-10-2018 JV59_21445 33b984783cbd38c11f026d5e06b261d1 200 SUPERFAMILY SSF47616 78 196 3.23E-8 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily JV59_21445 33b984783cbd38c11f026d5e06b261d1 200 Gene3D G3DSA:1.20.1050.10 83 183 1.4E-20 T 14-10-2018 JV59_21445 33b984783cbd38c11f026d5e06b261d1 200 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 78 2.8E-11 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 JV59_18500 20c84f3e9fd789b39b32b47039a3e7d7 770 SMART SM00304 440 493 4.3E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_18500 20c84f3e9fd789b39b32b47039a3e7d7 770 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 579 735 9.7E-45 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_18500 20c84f3e9fd789b39b32b47039a3e7d7 770 SMART SM00283 506 769 4.7E-77 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_18500 20c84f3e9fd789b39b32b47039a3e7d7 770 Pfam PF00672 HAMP domain 441 490 2.6E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_18500 20c84f3e9fd789b39b32b47039a3e7d7 770 Gene3D G3DSA:1.10.287.950 439 770 3.1E-74 T 14-10-2018 JV59_18500 20c84f3e9fd789b39b32b47039a3e7d7 770 SUPERFAMILY SSF58104 461 770 2.22E-75 T 14-10-2018 JV59_18500 20c84f3e9fd789b39b32b47039a3e7d7 770 Gene3D G3DSA:3.30.450.20 251 417 1.3E-8 T 14-10-2018 JV59_19300 3e1d2696f573b4ba17c273264a315ea1 104 Gene3D G3DSA:3.30.70.920 6 75 6.1E-23 T 14-10-2018 JV59_19300 3e1d2696f573b4ba17c273264a315ea1 104 Hamap MF_02200 Chaperone NapD [napD]. 6 82 19.635 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly JV59_19300 3e1d2696f573b4ba17c273264a315ea1 104 Pfam PF03927 NapD protein 6 80 3.2E-29 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly JV59_30560 3e38e49395a79d881266035dcd95f75c 387 PRINTS PR01035 Tetracycline resistance protein signature 45 64 1.2E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 JV59_30560 3e38e49395a79d881266035dcd95f75c 387 PRINTS PR01035 Tetracycline resistance protein signature 103 124 1.2E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 JV59_30560 3e38e49395a79d881266035dcd95f75c 387 PRINTS PR01035 Tetracycline resistance protein signature 163 183 1.2E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 JV59_30560 3e38e49395a79d881266035dcd95f75c 387 PRINTS PR01035 Tetracycline resistance protein signature 15 31 1.2E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 JV59_30560 3e38e49395a79d881266035dcd95f75c 387 Pfam PF07690 Major Facilitator Superfamily 14 238 1.5E-25 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_30560 3e38e49395a79d881266035dcd95f75c 387 Gene3D G3DSA:1.20.1250.20 3 380 1.1E-46 T 14-10-2018 JV59_30560 3e38e49395a79d881266035dcd95f75c 387 SUPERFAMILY SSF103473 6 377 1.7E-56 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_35340 ef48a6f0e6b1093647faffc0c4cdce55 122 Pfam PF13698 Domain of unknown function (DUF4156) 32 118 1.7E-22 T 14-10-2018 IPR025294 Protein of unknown function DUF4156 JV59_28945 e896436f6d89032676fa641ab2237623 245 Gene3D G3DSA:3.20.20.70 1 245 1.9E-87 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_28945 e896436f6d89032676fa641ab2237623 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.25 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 JV59_28945 e896436f6d89032676fa641ab2237623 245 SUPERFAMILY SSF51366 2 242 3.63E-61 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 JV59_28945 e896436f6d89032676fa641ab2237623 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 1.9E-76 T 14-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 JV59_28945 e896436f6d89032676fa641ab2237623 245 Pfam PF00977 Histidine biosynthesis protein 2 234 1.9E-74 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 JV59_40215 03774580e33651d80471e84187da63b6 263 Pfam PF01177 Asp/Glu/Hydantoin racemase 9 213 1.7E-26 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JV59_40215 03774580e33651d80471e84187da63b6 263 SUPERFAMILY SSF53681 6 107 3.14E-30 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JV59_40215 03774580e33651d80471e84187da63b6 263 Gene3D G3DSA:3.40.50.1860 9 228 3.5E-82 T 14-10-2018 JV59_40215 03774580e33651d80471e84187da63b6 263 TIGRFAM TIGR00067 glut_race: glutamate racemase 7 223 9.8E-68 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JV59_40215 03774580e33651d80471e84187da63b6 263 Gene3D G3DSA:3.40.50.1860 97 206 3.5E-82 T 14-10-2018 JV59_40215 03774580e33651d80471e84187da63b6 263 SUPERFAMILY SSF53681 109 256 1.8E-32 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JV59_40215 03774580e33651d80471e84187da63b6 263 Hamap MF_00258 Glutamate racemase [murI]. 5 252 32.463 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JV59_40215 03774580e33651d80471e84187da63b6 263 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 72 80 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JV59_28265 0204fd2b026f5b45c9cd00354c1f1b5c 294 Pfam PF01263 Aldose 1-epimerase 27 291 8.4E-49 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 JV59_28265 0204fd2b026f5b45c9cd00354c1f1b5c 294 Gene3D G3DSA:2.70.98.10 2 294 1.9E-85 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 JV59_28265 0204fd2b026f5b45c9cd00354c1f1b5c 294 PIRSF PIRSF016020 4 294 3.1E-63 T 14-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 JV59_28265 0204fd2b026f5b45c9cd00354c1f1b5c 294 SUPERFAMILY SSF74650 8 291 4.33E-72 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 JV59_30100 b8a02cc60a54637882945ce7a4a3778f 478 SMART SM00640 38 443 4.8E-110 T 14-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 JV59_30100 b8a02cc60a54637882945ce7a4a3778f 478 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 38 339 1.3E-85 T 14-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal JV59_30100 b8a02cc60a54637882945ce7a4a3778f 478 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 38 51 - T 14-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 JV59_30100 b8a02cc60a54637882945ce7a4a3778f 478 Gene3D G3DSA:2.60.120.560 349 456 4.3E-105 T 14-10-2018 JV59_30100 b8a02cc60a54637882945ce7a4a3778f 478 Gene3D G3DSA:2.115.10.20 34 348 4.3E-105 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily JV59_30100 b8a02cc60a54637882945ce7a4a3778f 478 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 342 464 1.1E-13 T 14-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal JV59_30100 b8a02cc60a54637882945ce7a4a3778f 478 SUPERFAMILY SSF75005 29 339 4.43E-87 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily JV59_30100 b8a02cc60a54637882945ce7a4a3778f 478 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 24 454 1.5E-149 T 14-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 JV59_30100 b8a02cc60a54637882945ce7a4a3778f 478 SUPERFAMILY SSF49899 339 461 1.74E-19 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily JV59_39780 a3edcb28a164774b631e04f409758720 127 SUPERFAMILY SSF89550 34 105 1.77E-9 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 JV59_39780 a3edcb28a164774b631e04f409758720 127 Gene3D G3DSA:3.20.20.140 20 121 1.3E-10 T 14-10-2018 JV59_24210 e47f780b83033b83e8929edc92621bc5 447 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JV59_24210 e47f780b83033b83e8929edc92621bc5 447 Pfam PF00271 Helicase conserved C-terminal domain 238 345 5.7E-29 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_24210 e47f780b83033b83e8929edc92621bc5 447 Pfam PF00270 DEAD/DEAH box helicase 29 200 5.1E-46 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JV59_24210 e47f780b83033b83e8929edc92621bc5 447 Gene3D G3DSA:3.40.50.300 1 216 5.0E-71 T 14-10-2018 JV59_24210 e47f780b83033b83e8929edc92621bc5 447 SMART SM00490 264 345 5.7E-31 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_24210 e47f780b83033b83e8929edc92621bc5 447 SMART SM00487 24 227 4.2E-50 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JV59_24210 e47f780b83033b83e8929edc92621bc5 447 Gene3D G3DSA:3.40.50.300 218 432 2.7E-50 T 14-10-2018 JV59_24210 e47f780b83033b83e8929edc92621bc5 447 SUPERFAMILY SSF52540 77 363 1.49E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_25765 0ce5b270d6a0baf92910e86e6a628494 262 SUPERFAMILY SSF53850 11 261 2.85E-22 T 14-10-2018 JV59_25765 0ce5b270d6a0baf92910e86e6a628494 262 Gene3D G3DSA:3.40.190.10 15 226 1.5E-38 T 14-10-2018 JV59_25765 0ce5b270d6a0baf92910e86e6a628494 262 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 15 245 2.7E-55 T 14-10-2018 JV59_25765 0ce5b270d6a0baf92910e86e6a628494 262 Gene3D G3DSA:3.40.190.10 94 194 1.5E-38 T 14-10-2018 JV59_21430 4559e4546ba8b566fed20ab310f982b0 514 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 7 223 7.3E-64 T 14-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein JV59_21430 4559e4546ba8b566fed20ab310f982b0 514 Gene3D G3DSA:1.25.40.80 132 323 2.0E-97 T 14-10-2018 JV59_21430 4559e4546ba8b566fed20ab310f982b0 514 SUPERFAMILY SSF48173 229 496 1.7E-60 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 JV59_21430 4559e4546ba8b566fed20ab310f982b0 514 Gene3D G3DSA:1.10.10.1710 448 514 1.9E-23 T 14-10-2018 JV59_21430 4559e4546ba8b566fed20ab310f982b0 514 Gene3D G3DSA:1.10.579.10 327 447 4.6E-55 T 14-10-2018 JV59_21430 4559e4546ba8b566fed20ab310f982b0 514 Gene3D G3DSA:3.40.50.620 8 230 2.0E-97 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_30140 e7396c4f4a843db4a5346f1ca898d285 400 Gene3D G3DSA:2.40.420.20 38 339 4.2E-66 T 14-10-2018 JV59_30140 e7396c4f4a843db4a5346f1ca898d285 400 Gene3D G3DSA:2.40.30.170 43 268 4.2E-66 T 14-10-2018 JV59_30140 e7396c4f4a843db4a5346f1ca898d285 400 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 343 5.8E-67 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 JV59_30140 e7396c4f4a843db4a5346f1ca898d285 400 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 261 2.6E-23 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JV59_30140 e7396c4f4a843db4a5346f1ca898d285 400 SUPERFAMILY SSF111369 50 263 6.28E-38 T 14-10-2018 JV59_30140 e7396c4f4a843db4a5346f1ca898d285 400 Gene3D G3DSA:1.10.287.470 92 153 4.2E-66 T 14-10-2018 JV59_30140 e7396c4f4a843db4a5346f1ca898d285 400 Gene3D G3DSA:2.40.50.100 58 192 4.2E-66 T 14-10-2018 JV59_26070 2c021bef4484ef57131402ac81149cd3 88 Pfam PF17209 Hfq protein 7 69 1.8E-31 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 JV59_26070 2c021bef4484ef57131402ac81149cd3 88 SUPERFAMILY SSF50182 7 69 1.23E-24 T 14-10-2018 IPR010920 LSM domain superfamily JV59_26070 2c021bef4484ef57131402ac81149cd3 88 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 JV59_26070 2c021bef4484ef57131402ac81149cd3 88 Gene3D G3DSA:2.30.30.100 1 72 4.9E-35 T 14-10-2018 JV59_26070 2c021bef4484ef57131402ac81149cd3 88 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 7.0E-30 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 JV59_37860 1d19c7f9bc57a2f8dd698e6c125ec1fb 105 SUPERFAMILY SSF50104 4 102 2.41E-34 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily JV59_37860 1d19c7f9bc57a2f8dd698e6c125ec1fb 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_37860 1d19c7f9bc57a2f8dd698e6c125ec1fb 105 Pfam PF00467 KOW motif 8 37 7.8E-6 T 14-10-2018 IPR005824 KOW JV59_37860 1d19c7f9bc57a2f8dd698e6c125ec1fb 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 3.3E-40 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37860 1d19c7f9bc57a2f8dd698e6c125ec1fb 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 2.0E-23 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37860 1d19c7f9bc57a2f8dd698e6c125ec1fb 105 Gene3D G3DSA:2.30.30.30 2 104 2.5E-40 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 JV59_37860 1d19c7f9bc57a2f8dd698e6c125ec1fb 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.006 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37860 1d19c7f9bc57a2f8dd698e6c125ec1fb 105 SMART SM00739 4 31 3.4E-4 T 14-10-2018 IPR005824 KOW JV59_01410 091f29fb83370e7a68453e32ba87db45 246 Gene3D G3DSA:2.60.440.10 174 245 5.1E-29 T 14-10-2018 IPR027462 Z ring-associated protein D, C-terminal JV59_01410 091f29fb83370e7a68453e32ba87db45 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 32.275 T 14-10-2018 IPR009777 Cell division protein ZapD JV59_01410 091f29fb83370e7a68453e32ba87db45 246 SUPERFAMILY SSF160950 1 245 4.32E-92 T 14-10-2018 IPR036268 ZapD domain superfamily JV59_01410 091f29fb83370e7a68453e32ba87db45 246 Pfam PF07072 Cell division protein 18 224 1.9E-75 T 14-10-2018 IPR009777 Cell division protein ZapD JV59_01410 091f29fb83370e7a68453e32ba87db45 246 Gene3D G3DSA:1.10.3900.10 12 173 5.6E-56 T 14-10-2018 JV59_33600 eff8132bc88318b73ec5a5119302fd6b 360 Gene3D G3DSA:3.90.1150.10 258 360 1.9E-41 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_33600 eff8132bc88318b73ec5a5119302fd6b 360 PIRSF PIRSF000525 1 360 7.2E-155 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 JV59_33600 eff8132bc88318b73ec5a5119302fd6b 360 Gene3D G3DSA:3.40.640.10 17 257 7.6E-92 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_33600 eff8132bc88318b73ec5a5119302fd6b 360 Pfam PF00266 Aminotransferase class-V 4 348 1.2E-64 T 14-10-2018 IPR000192 Aminotransferase class V domain JV59_33600 eff8132bc88318b73ec5a5119302fd6b 360 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 359 51.472 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 JV59_33600 eff8132bc88318b73ec5a5119302fd6b 360 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 358 1.8E-161 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 JV59_33600 eff8132bc88318b73ec5a5119302fd6b 360 SUPERFAMILY SSF53383 1 356 1.26E-114 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_27400 e13689669650d968ac9a785800378a87 304 SMART SM00047 149 302 2.3E-56 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 JV59_27400 e13689669650d968ac9a785800378a87 304 Gene3D G3DSA:1.10.530.10 159 297 1.1E-44 T 14-10-2018 JV59_27400 e13689669650d968ac9a785800378a87 304 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 165 301 2.4E-20 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 JV59_27400 e13689669650d968ac9a785800378a87 304 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 10 301 7.6E-106 T 14-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 JV59_27400 e13689669650d968ac9a785800378a87 304 Gene3D G3DSA:2.10.70.40 193 244 1.1E-44 T 14-10-2018 JV59_27400 e13689669650d968ac9a785800378a87 304 Pfam PF10135 Rod binding protein 53 102 5.0E-15 T 14-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal JV59_27400 e13689669650d968ac9a785800378a87 304 SUPERFAMILY SSF53955 144 198 7.69E-5 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily JV59_27400 e13689669650d968ac9a785800378a87 304 PRINTS PR01002 Flagellar protein FlgJ signature 79 101 2.0E-28 T 14-10-2018 JV59_27400 e13689669650d968ac9a785800378a87 304 PRINTS PR01002 Flagellar protein FlgJ signature 178 196 2.0E-28 T 14-10-2018 JV59_27400 e13689669650d968ac9a785800378a87 304 PRINTS PR01002 Flagellar protein FlgJ signature 219 240 2.0E-28 T 14-10-2018 JV59_27400 e13689669650d968ac9a785800378a87 304 PRINTS PR01002 Flagellar protein FlgJ signature 284 302 2.0E-28 T 14-10-2018 JV59_27400 e13689669650d968ac9a785800378a87 304 PRINTS PR01002 Flagellar protein FlgJ signature 31 54 2.0E-28 T 14-10-2018 JV59_27400 e13689669650d968ac9a785800378a87 304 PRINTS PR01002 Flagellar protein FlgJ signature 241 262 2.0E-28 T 14-10-2018 JV59_24055 3107d4e71ba2943dc75814b226f4e2ac 211 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 14-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JV59_24055 3107d4e71ba2943dc75814b226f4e2ac 211 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 211 37.684 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JV59_24055 3107d4e71ba2943dc75814b226f4e2ac 211 Gene3D G3DSA:2.30.110.10 13 211 1.6E-76 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JV59_24055 3107d4e71ba2943dc75814b226f4e2ac 211 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 1 211 2.2E-89 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JV59_24055 3107d4e71ba2943dc75814b226f4e2ac 211 SUPERFAMILY SSF50475 10 211 8.23E-66 T 14-10-2018 JV59_24055 3107d4e71ba2943dc75814b226f4e2ac 211 PIRSF PIRSF000190 1 211 3.5E-80 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JV59_24055 3107d4e71ba2943dc75814b226f4e2ac 211 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 115 5.5E-24 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JV59_24055 3107d4e71ba2943dc75814b226f4e2ac 211 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 211 8.3E-20 T 14-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JV59_24335 ecdfd1292feb7b73de71701a6cc2ae45 95 Gene3D G3DSA:3.30.160.390 10 84 9.1E-15 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily JV59_24335 ecdfd1292feb7b73de71701a6cc2ae45 95 Pfam PF13356 Arm DNA-binding domain 15 73 1.9E-7 T 14-10-2018 IPR025166 Integrase, DNA-binding domain JV59_35500 03bd4b4201d0d19fd6528fa687542f3b 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 8 228 6.7E-85 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_35500 03bd4b4201d0d19fd6528fa687542f3b 236 Gene3D G3DSA:3.10.20.30 1 104 3.6E-32 T 14-10-2018 IPR012675 Beta-grasp domain superfamily JV59_35500 03bd4b4201d0d19fd6528fa687542f3b 236 Gene3D G3DSA:1.10.1060.10 105 236 6.8E-56 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JV59_35500 03bd4b4201d0d19fd6528fa687542f3b 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 109 1.5E-28 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_35500 03bd4b4201d0d19fd6528fa687542f3b 236 SUPERFAMILY SSF46548 105 233 4.36E-39 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JV59_35500 03bd4b4201d0d19fd6528fa687542f3b 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JV59_35500 03bd4b4201d0d19fd6528fa687542f3b 236 SUPERFAMILY SSF54292 1 104 1.27E-28 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JV59_35500 03bd4b4201d0d19fd6528fa687542f3b 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 1.4E-10 T 14-10-2018 JV59_35350 45da5f1547dfeb725d914721e475693f 115 Pfam PF03960 ArsC family 6 113 4.9E-19 T 14-10-2018 IPR006660 Arsenate reductase-like JV59_35350 45da5f1547dfeb725d914721e475693f 115 Gene3D G3DSA:3.40.30.10 2 115 1.2E-43 T 14-10-2018 JV59_35350 45da5f1547dfeb725d914721e475693f 115 SUPERFAMILY SSF52833 2 114 9.27E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_35350 45da5f1547dfeb725d914721e475693f 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 112 1.3E-33 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR JV59_39215 a2ecece8957d330804ba70bddfdb5925 416 SUPERFAMILY SSF53383 13 411 5.78E-62 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_39215 a2ecece8957d330804ba70bddfdb5925 416 Pfam PF00155 Aminotransferase class I and II 68 400 5.8E-28 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JV59_39215 a2ecece8957d330804ba70bddfdb5925 416 Gene3D G3DSA:3.40.640.10 1 416 1.3E-150 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_34735 e246511199fe2fd48495dfbe365a1351 208 Gene3D G3DSA:3.90.226.10 5 207 2.8E-84 T 14-10-2018 JV59_34735 e246511199fe2fd48495dfbe365a1351 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.444 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JV59_34735 e246511199fe2fd48495dfbe365a1351 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 14-10-2018 IPR033135 ClpP, histidine active site JV59_34735 e246511199fe2fd48495dfbe365a1351 208 SUPERFAMILY SSF52096 23 206 3.81E-75 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JV59_34735 e246511199fe2fd48495dfbe365a1351 208 Pfam PF00574 Clp protease 25 205 1.6E-89 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA JV59_34735 e246511199fe2fd48495dfbe365a1351 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 205 3.9E-107 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JV59_34735 e246511199fe2fd48495dfbe365a1351 208 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 7.4E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JV59_34735 e246511199fe2fd48495dfbe365a1351 208 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 7.4E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JV59_34735 e246511199fe2fd48495dfbe365a1351 208 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 7.4E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JV59_34735 e246511199fe2fd48495dfbe365a1351 208 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 7.4E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JV59_34735 e246511199fe2fd48495dfbe365a1351 208 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 7.4E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JV59_34735 e246511199fe2fd48495dfbe365a1351 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 14-10-2018 IPR018215 ClpP, Ser active site JV59_38690 64d7de14159c4d0a2075d8dccc484387 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 1.4E-69 T 14-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JV59_38690 64d7de14159c4d0a2075d8dccc484387 213 Pfam PF00156 Phosphoribosyl transferase domain 43 161 1.0E-12 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 JV59_38690 64d7de14159c4d0a2075d8dccc484387 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.075 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JV59_38690 64d7de14159c4d0a2075d8dccc484387 213 SUPERFAMILY SSF53271 2 211 1.01E-49 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like JV59_38690 64d7de14159c4d0a2075d8dccc484387 213 Gene3D G3DSA:3.40.50.2020 1 213 6.2E-80 T 14-10-2018 JV59_23635 e4a9f5640eb5533d21506fd59984c7b9 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 8.4E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_23635 e4a9f5640eb5533d21506fd59984c7b9 297 Pfam PF03466 LysR substrate binding domain 125 277 5.2E-10 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_23635 e4a9f5640eb5533d21506fd59984c7b9 297 Gene3D G3DSA:1.10.10.10 1 83 8.3E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_23635 e4a9f5640eb5533d21506fd59984c7b9 297 SUPERFAMILY SSF46785 1 81 1.79E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_23635 e4a9f5640eb5533d21506fd59984c7b9 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_23635 e4a9f5640eb5533d21506fd59984c7b9 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_23635 e4a9f5640eb5533d21506fd59984c7b9 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_23635 e4a9f5640eb5533d21506fd59984c7b9 297 SUPERFAMILY SSF53850 90 278 4.71E-15 T 14-10-2018 JV59_28955 7f02a4783cfe1a655c2e46ecdbdd13a2 211 SUPERFAMILY SSF101386 123 210 3.55E-25 T 14-10-2018 JV59_28955 7f02a4783cfe1a655c2e46ecdbdd13a2 211 Gene3D G3DSA:3.10.20.400 4 102 2.5E-36 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 JV59_28955 7f02a4783cfe1a655c2e46ecdbdd13a2 211 Gene3D G3DSA:1.10.287.1080 120 211 1.6E-29 T 14-10-2018 JV59_28955 7f02a4783cfe1a655c2e46ecdbdd13a2 211 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 120 206 19.678 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 JV59_28955 7f02a4783cfe1a655c2e46ecdbdd13a2 211 SUPERFAMILY SSF141734 14 122 2.75E-45 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 JV59_28955 7f02a4783cfe1a655c2e46ecdbdd13a2 211 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 123 210 4.1E-18 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 JV59_28955 7f02a4783cfe1a655c2e46ecdbdd13a2 211 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 211 37.661 T 14-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 JV59_28955 7f02a4783cfe1a655c2e46ecdbdd13a2 211 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 1.7E-31 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 JV59_28955 7f02a4783cfe1a655c2e46ecdbdd13a2 211 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 123 206 1.1E-31 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 JV59_28955 7f02a4783cfe1a655c2e46ecdbdd13a2 211 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 1.0E-21 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 JV59_22450 5f763c68ecbc1b56663e96ed633c25ae 165 SUPERFAMILY SSF55729 3 150 2.23E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_22450 5f763c68ecbc1b56663e96ed633c25ae 165 Pfam PF00583 Acetyltransferase (GNAT) family 45 142 4.6E-12 T 14-10-2018 IPR000182 GNAT domain JV59_22450 5f763c68ecbc1b56663e96ed633c25ae 165 Gene3D G3DSA:3.40.630.30 5 150 1.3E-25 T 14-10-2018 JV59_35965 61f9f3334b19ef95f54441d469e8ecdd 367 Pfam PF06725 3D domain 272 348 5.8E-21 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 JV59_35965 61f9f3334b19ef95f54441d469e8ecdd 367 Pfam PF03562 MltA specific insert domain 63 252 6.1E-37 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 JV59_35965 61f9f3334b19ef95f54441d469e8ecdd 367 SMART SM00925 119 252 1.5E-62 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 JV59_35965 61f9f3334b19ef95f54441d469e8ecdd 367 Gene3D G3DSA:2.40.240.50 119 257 2.8E-134 T 14-10-2018 JV59_35965 61f9f3334b19ef95f54441d469e8ecdd 367 SUPERFAMILY SSF50685 20 350 1.05E-101 T 14-10-2018 IPR036908 RlpA-like domain superfamily JV59_35965 61f9f3334b19ef95f54441d469e8ecdd 367 Gene3D G3DSA:2.40.40.10 51 348 2.8E-134 T 14-10-2018 IPR036908 RlpA-like domain superfamily JV59_02275 6f7eb8a4c31043e642ca300cabe7312f 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.579 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 JV59_02275 6f7eb8a4c31043e642ca300cabe7312f 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 2.5E-204 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 JV59_02275 6f7eb8a4c31043e642ca300cabe7312f 414 PIRSF PIRSF016055 1 414 1.4E-199 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 JV59_02275 6f7eb8a4c31043e642ca300cabe7312f 414 Pfam PF03116 NQR2, RnfD, RnfE family 41 405 4.5E-107 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 JV59_32530 0948eed9d05885e9a2c64ce753052208 153 Gene3D G3DSA:1.20.120.1630 2 153 8.0E-27 T 14-10-2018 JV59_32530 0948eed9d05885e9a2c64ce753052208 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 108 153 2.0E-10 T 14-10-2018 JV59_32530 0948eed9d05885e9a2c64ce753052208 153 Pfam PF04191 Phospholipid methyltransferase 43 141 1.4E-14 T 14-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 JV59_38015 b430982ebcb29a3603a7015311c98a46 404 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JV59_38015 b430982ebcb29a3603a7015311c98a46 404 PIRSF PIRSF000521 171 402 3.1E-36 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JV59_38015 b430982ebcb29a3603a7015311c98a46 404 PIRSF PIRSF000521 23 155 2.6E-6 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JV59_38015 b430982ebcb29a3603a7015311c98a46 404 SUPERFAMILY SSF53383 16 400 4.35E-128 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_38015 b430982ebcb29a3603a7015311c98a46 404 Gene3D G3DSA:3.90.1150.10 24 392 4.6E-151 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_38015 b430982ebcb29a3603a7015311c98a46 404 Gene3D G3DSA:3.40.640.10 59 304 4.6E-151 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_38015 b430982ebcb29a3603a7015311c98a46 404 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 9.2E-150 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 JV59_38015 b430982ebcb29a3603a7015311c98a46 404 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 1.3E-207 T 14-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 JV59_38015 b430982ebcb29a3603a7015311c98a46 404 Pfam PF00202 Aminotransferase class-III 22 399 1.5E-127 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JV59_38015 b430982ebcb29a3603a7015311c98a46 404 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 69.962 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 JV59_38330 c100d6a92c9eedf4e7404f2f5c85bec8 125 Gene3D G3DSA:1.20.1300.10 6 125 1.5E-44 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_38330 c100d6a92c9eedf4e7404f2f5c85bec8 125 SUPERFAMILY SSF81343 7 125 1.57E-49 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_38330 c100d6a92c9eedf4e7404f2f5c85bec8 125 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 11 125 5.0E-55 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 JV59_38330 c100d6a92c9eedf4e7404f2f5c85bec8 125 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 7 125 24.536 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 JV59_38330 c100d6a92c9eedf4e7404f2f5c85bec8 125 Pfam PF02313 Fumarate reductase subunit D 11 123 4.0E-45 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 JV59_38330 c100d6a92c9eedf4e7404f2f5c85bec8 125 PIRSF PIRSF000179 6 125 1.0E-55 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 JV59_27110 41baf21874bf8062a59fac1ad9c63e6e 156 Pfam PF07295 Zinc-ribbon containing domain 15 152 1.3E-46 T 14-10-2018 IPR009912 Zinc-ribbon containing domain JV59_35710 5917330aa0fdbc6a8daeff00d0a87662 163 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_35710 5917330aa0fdbc6a8daeff00d0a87662 163 Pfam PF12019 Type II transport protein GspH 41 130 8.4E-9 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 JV59_35710 5917330aa0fdbc6a8daeff00d0a87662 163 PIRSF PIRSF024622 1 163 2.2E-48 T 14-10-2018 IPR016824 Tfp pilus assembly protein FimT JV59_35710 5917330aa0fdbc6a8daeff00d0a87662 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 2.8E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_35710 5917330aa0fdbc6a8daeff00d0a87662 163 SUPERFAMILY SSF54523 5 96 5.89E-10 T 14-10-2018 JV59_02500 f9231e4141dac783b585b831d275a557 343 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 JV59_02500 f9231e4141dac783b585b831d275a557 343 Gene3D G3DSA:2.160.10.10 100 309 8.5E-64 T 14-10-2018 JV59_02500 f9231e4141dac783b585b831d275a557 343 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 34.552 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 JV59_02500 f9231e4141dac783b585b831d275a557 343 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 88 3.2E-20 T 14-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 JV59_02500 f9231e4141dac783b585b831d275a557 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 113 144 6.4E-7 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_02500 f9231e4141dac783b585b831d275a557 343 SUPERFAMILY SSF51161 32 316 7.63E-86 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JV59_02500 f9231e4141dac783b585b831d275a557 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 1.5E-8 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_02500 f9231e4141dac783b585b831d275a557 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 258 285 0.0022 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_02500 f9231e4141dac783b585b831d275a557 343 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 1.2E-114 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 JV59_02500 f9231e4141dac783b585b831d275a557 343 Gene3D G3DSA:3.40.1390.10 1 99 6.6E-30 T 14-10-2018 JV59_37915 987e2811ffae0c9aeeddf6e4e23fbe37 103 SUPERFAMILY SSF54999 5 101 1.7E-36 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily JV59_37915 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.3E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37915 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.3E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37915 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.3E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37915 987e2811ffae0c9aeeddf6e4e23fbe37 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37915 987e2811ffae0c9aeeddf6e4e23fbe37 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 8.5E-35 T 14-10-2018 IPR027486 Ribosomal protein S10 domain JV59_37915 987e2811ffae0c9aeeddf6e4e23fbe37 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.898 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37915 987e2811ffae0c9aeeddf6e4e23fbe37 103 SMART SM01403 7 101 8.0E-56 T 14-10-2018 IPR027486 Ribosomal protein S10 domain JV59_37915 987e2811ffae0c9aeeddf6e4e23fbe37 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37915 987e2811ffae0c9aeeddf6e4e23fbe37 103 Gene3D G3DSA:3.30.70.600 1 103 1.2E-37 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily JV59_36455 2d75e0c08eec2f841320e1a7598d4eab 168 Gene3D G3DSA:1.10.10.10 1 144 7.6E-54 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_36455 2d75e0c08eec2f841320e1a7598d4eab 168 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 4.1E-47 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type JV59_36455 2d75e0c08eec2f841320e1a7598d4eab 168 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 168 51.169 T 14-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 JV59_36455 2d75e0c08eec2f841320e1a7598d4eab 168 SUPERFAMILY SSF46785 2 133 1.94E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_36455 2d75e0c08eec2f841320e1a7598d4eab 168 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 1.1E-65 T 14-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 JV59_36455 2d75e0c08eec2f841320e1a7598d4eab 168 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site JV59_36455 2d75e0c08eec2f841320e1a7598d4eab 168 Pfam PF02082 Transcriptional regulator 1 83 8.5E-28 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type JV59_39740 9cf1fafbedcb365437c3204bb7a7b970 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 565 7.5E-4 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JV59_39740 9cf1fafbedcb365437c3204bb7a7b970 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 268 2.1E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JV59_39740 9cf1fafbedcb365437c3204bb7a7b970 571 Pfam PF00005 ABC transporter 24 181 3.3E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_39740 9cf1fafbedcb365437c3204bb7a7b970 571 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_39740 9cf1fafbedcb365437c3204bb7a7b970 571 SMART SM00382 32 231 7.7E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_39740 9cf1fafbedcb365437c3204bb7a7b970 571 SMART SM00382 338 534 1.7E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_39740 9cf1fafbedcb365437c3204bb7a7b970 571 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_39740 9cf1fafbedcb365437c3204bb7a7b970 571 Pfam PF00005 ABC transporter 330 483 2.1E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_39740 9cf1fafbedcb365437c3204bb7a7b970 571 SUPERFAMILY SSF52540 303 554 2.3E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_39740 9cf1fafbedcb365437c3204bb7a7b970 571 SUPERFAMILY SSF52540 3 253 1.05E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_39740 9cf1fafbedcb365437c3204bb7a7b970 571 Gene3D G3DSA:3.40.50.300 1 288 1.3E-84 T 14-10-2018 JV59_39740 9cf1fafbedcb365437c3204bb7a7b970 571 Gene3D G3DSA:3.40.50.300 300 571 1.1E-86 T 14-10-2018 JV59_24025 79ff2d70bd0acbd44c51d4841e565ae8 465 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 255 273 - T 14-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 JV59_24025 79ff2d70bd0acbd44c51d4841e565ae8 465 Pfam PF01212 Beta-eliminating lyase 46 431 1.8E-96 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 JV59_24025 79ff2d70bd0acbd44c51d4841e565ae8 465 Gene3D G3DSA:3.40.640.10 58 326 3.4E-207 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_24025 79ff2d70bd0acbd44c51d4841e565ae8 465 Gene3D G3DSA:3.90.1150.10 6 460 3.4E-207 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_24025 79ff2d70bd0acbd44c51d4841e565ae8 465 SUPERFAMILY SSF53383 2 463 1.3E-141 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_24025 79ff2d70bd0acbd44c51d4841e565ae8 465 PIRSF PIRSF001386 1 465 3.0E-224 T 14-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 JV59_24025 79ff2d70bd0acbd44c51d4841e565ae8 465 Hamap MF_00544 Tryptophanase [tnaA]. 1 465 104.826 T 14-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 JV59_39840 8b6dccdb3eac2801a7254751c000d0b9 723 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 2.3E-75 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 JV59_39840 8b6dccdb3eac2801a7254751c000d0b9 723 Gene3D G3DSA:3.40.50.300 10 273 2.1E-98 T 14-10-2018 JV59_39840 8b6dccdb3eac2801a7254751c000d0b9 723 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 721 0.0 T 14-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 JV59_39840 8b6dccdb3eac2801a7254751c000d0b9 723 Gene3D G3DSA:1.10.486.10 382 538 2.7E-132 T 14-10-2018 JV59_39840 8b6dccdb3eac2801a7254751c000d0b9 723 Gene3D G3DSA:1.10.10.160 114 187 2.1E-98 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily JV59_39840 8b6dccdb3eac2801a7254751c000d0b9 723 SUPERFAMILY SSF52540 7 642 2.07E-180 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_39840 8b6dccdb3eac2801a7254751c000d0b9 723 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 1.8E-79 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 JV59_39840 8b6dccdb3eac2801a7254751c000d0b9 723 Gene3D G3DSA:3.40.50.300 281 636 2.7E-132 T 14-10-2018 JV59_01815 f6c4bbb45a6d78c8eba4f69379996362 111 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 4.5E-26 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 JV59_01815 f6c4bbb45a6d78c8eba4f69379996362 111 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.5E-45 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 JV59_01815 f6c4bbb45a6d78c8eba4f69379996362 111 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 2.5E-45 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 JV59_01815 f6c4bbb45a6d78c8eba4f69379996362 111 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.5E-45 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 JV59_01815 f6c4bbb45a6d78c8eba4f69379996362 111 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 2.5E-45 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 JV59_01815 f6c4bbb45a6d78c8eba4f69379996362 111 Pfam PF03840 Preprotein translocase SecG subunit 4 72 2.7E-22 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 JV59_27515 89f5c966ee7b015174b6f4880a05164e 157 Gene3D G3DSA:3.90.960.10 1 157 1.3E-59 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 JV59_27515 89f5c966ee7b015174b6f4880a05164e 157 SUPERFAMILY SSF55826 2 156 6.93E-44 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 JV59_27515 89f5c966ee7b015174b6f4880a05164e 157 PIRSF PIRSF006181 1 157 8.0E-54 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC JV59_27515 89f5c966ee7b015174b6f4880a05164e 157 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 4.5E-59 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC JV59_27515 89f5c966ee7b015174b6f4880a05164e 157 Pfam PF04073 Aminoacyl-tRNA editing domain 32 146 8.4E-26 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 JV59_25570 25f61ca2d8db5a111627d406f22232dd 239 Gene3D G3DSA:3.40.190.10 97 192 1.1E-13 T 14-10-2018 JV59_25570 25f61ca2d8db5a111627d406f22232dd 239 SUPERFAMILY SSF53850 13 231 1.84E-29 T 14-10-2018 JV59_25570 25f61ca2d8db5a111627d406f22232dd 239 Gene3D G3DSA:3.40.190.10 22 230 1.1E-13 T 14-10-2018 JV59_25570 25f61ca2d8db5a111627d406f22232dd 239 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 230 5.1E-10 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_33430 77ea7fb270694cc4a03248c88e723964 642 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 229 242 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 JV59_33430 77ea7fb270694cc4a03248c88e723964 642 Gene3D G3DSA:3.30.420.40 19 216 2.3E-36 T 14-10-2018 JV59_33430 77ea7fb270694cc4a03248c88e723964 642 Pfam PF00012 Hsp70 protein 19 350 9.7E-18 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_33430 77ea7fb270694cc4a03248c88e723964 642 SUPERFAMILY SSF53067 224 483 1.38E-26 T 14-10-2018 JV59_33430 77ea7fb270694cc4a03248c88e723964 642 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 21 28 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 JV59_33430 77ea7fb270694cc4a03248c88e723964 642 PRINTS PR00301 70kDa heat shock protein signature 235 245 4.9E-7 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_33430 77ea7fb270694cc4a03248c88e723964 642 PRINTS PR00301 70kDa heat shock protein signature 168 188 4.9E-7 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_33430 77ea7fb270694cc4a03248c88e723964 642 PRINTS PR00301 70kDa heat shock protein signature 17 30 4.9E-7 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_33430 77ea7fb270694cc4a03248c88e723964 642 Gene3D G3DSA:3.90.640.10 265 344 2.3E-36 T 14-10-2018 JV59_33430 77ea7fb270694cc4a03248c88e723964 642 SUPERFAMILY SSF53067 17 210 1.35E-28 T 14-10-2018 JV59_33430 77ea7fb270694cc4a03248c88e723964 642 Gene3D G3DSA:3.30.420.40 222 264 2.3E-36 T 14-10-2018 JV59_39770 31aa3c7e39638634c2716fb1027cffae 298 Pfam PF00072 Response regulator receiver domain 3 115 7.4E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_39770 31aa3c7e39638634c2716fb1027cffae 298 SMART SM00448 1 115 8.7E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_39770 31aa3c7e39638634c2716fb1027cffae 298 Gene3D G3DSA:3.40.50.12740 1 240 1.5E-28 T 14-10-2018 JV59_39770 31aa3c7e39638634c2716fb1027cffae 298 SUPERFAMILY SSF52172 2 128 2.99E-27 T 14-10-2018 IPR011006 CheY-like superfamily JV59_26005 e9ead9ad2436088679a283d37a756227 164 Gene3D G3DSA:3.30.70.1730 1 124 3.7E-35 T 14-10-2018 JV59_26005 e9ead9ad2436088679a283d37a756227 164 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 24.398 T 14-10-2018 IPR022973 Ribosomal protein L10 JV59_26005 e9ead9ad2436088679a283d37a756227 164 Pfam PF00466 Ribosomal protein L10 5 101 1.9E-26 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 JV59_26005 e9ead9ad2436088679a283d37a756227 164 SUPERFAMILY SSF160369 4 159 1.07E-45 T 14-10-2018 JV59_31930 a225323419f0b47a673e15f26463aa0c 309 Pfam PF06996 Type VI secretion, TssG 11 294 2.3E-40 T 14-10-2018 IPR010732 Type VI secretion, TssG-like JV59_09515 2469e8a8707165d304f9dbeb139f462b 256 Pfam PF00005 ABC transporter 22 181 2.0E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_09515 2469e8a8707165d304f9dbeb139f462b 256 PIRSF PIRSF039085 3 256 4.4E-118 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 JV59_09515 2469e8a8707165d304f9dbeb139f462b 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_09515 2469e8a8707165d304f9dbeb139f462b 256 SUPERFAMILY SSF52540 7 251 4.94E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_09515 2469e8a8707165d304f9dbeb139f462b 256 Gene3D G3DSA:3.40.50.300 4 255 9.3E-75 T 14-10-2018 JV59_09515 2469e8a8707165d304f9dbeb139f462b 256 SMART SM00382 31 229 8.9E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_35485 88ca4e7d8186d11f5476ea60344c3026 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 JV59_35485 88ca4e7d8186d11f5476ea60344c3026 388 Pfam PF00549 CoA-ligase 262 382 9.4E-25 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 JV59_35485 88ca4e7d8186d11f5476ea60344c3026 388 Pfam PF08442 ATP-grasp domain 2 203 6.2E-79 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 JV59_35485 88ca4e7d8186d11f5476ea60344c3026 388 Gene3D G3DSA:3.30.1490.20 21 104 1.9E-91 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JV59_35485 88ca4e7d8186d11f5476ea60344c3026 388 Gene3D G3DSA:3.40.50.261 240 388 1.1E-56 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 JV59_35485 88ca4e7d8186d11f5476ea60344c3026 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.5E-172 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 JV59_35485 88ca4e7d8186d11f5476ea60344c3026 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.135 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 JV59_35485 88ca4e7d8186d11f5476ea60344c3026 388 Gene3D G3DSA:3.30.470.20 1 234 1.9E-91 T 14-10-2018 JV59_35485 88ca4e7d8186d11f5476ea60344c3026 388 SUPERFAMILY SSF56059 1 238 7.07E-79 T 14-10-2018 JV59_35485 88ca4e7d8186d11f5476ea60344c3026 388 SUPERFAMILY SSF52210 239 385 4.58E-54 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 JV59_35485 88ca4e7d8186d11f5476ea60344c3026 388 PIRSF PIRSF001554 1 388 4.0E-154 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 JV59_38935 357c41274192fb7a02731635a633dcd0 313 Pfam PF13673 Acetyltransferase (GNAT) domain 59 144 1.9E-10 T 14-10-2018 IPR000182 GNAT domain JV59_38935 357c41274192fb7a02731635a633dcd0 313 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 2.6E-52 T 14-10-2018 IPR012660 Thioesterase, putative JV59_38935 357c41274192fb7a02731635a633dcd0 313 Gene3D G3DSA:3.40.630.30 3 145 5.5E-28 T 14-10-2018 JV59_38935 357c41274192fb7a02731635a633dcd0 313 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 297 7.0E-45 T 14-10-2018 IPR012660 Thioesterase, putative JV59_38935 357c41274192fb7a02731635a633dcd0 313 SUPERFAMILY SSF54637 154 296 6.82E-40 T 14-10-2018 IPR029069 HotDog domain superfamily JV59_38935 357c41274192fb7a02731635a633dcd0 313 Gene3D G3DSA:3.10.129.10 147 298 2.7E-46 T 14-10-2018 JV59_38935 357c41274192fb7a02731635a633dcd0 313 SUPERFAMILY SSF55729 2 153 3.49E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_28375 72d8c85082896509c6a1b81c49cabddb 231 Pfam PF09335 SNARE associated Golgi protein 65 181 6.3E-23 T 14-10-2018 IPR032816 SNARE associated Golgi protein JV59_23615 034afcb68bb952bf262522082617da8f 232 Gene3D G3DSA:3.40.50.2300 1 122 4.1E-33 T 14-10-2018 JV59_23615 034afcb68bb952bf262522082617da8f 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 224 9.5E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_23615 034afcb68bb952bf262522082617da8f 232 SMART SM00448 1 112 2.1E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_23615 034afcb68bb952bf262522082617da8f 232 Pfam PF00072 Response regulator receiver domain 4 112 5.7E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_23615 034afcb68bb952bf262522082617da8f 232 SMART SM00862 149 224 7.0E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_23615 034afcb68bb952bf262522082617da8f 232 SUPERFAMILY SSF52172 1 182 2.54E-33 T 14-10-2018 IPR011006 CheY-like superfamily JV59_23615 034afcb68bb952bf262522082617da8f 232 Gene3D G3DSA:1.10.10.10 127 230 4.4E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_35385 86a44cdb4d6efe610b1885b211584023 521 SMART SM00267 351 521 7.2E-36 T 14-10-2018 IPR000160 GGDEF domain JV59_35385 86a44cdb4d6efe610b1885b211584023 521 SUPERFAMILY SSF55073 366 520 9.42E-37 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_35385 86a44cdb4d6efe610b1885b211584023 521 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 516 1.2E-35 T 14-10-2018 IPR000160 GGDEF domain JV59_35385 86a44cdb4d6efe610b1885b211584023 521 Gene3D G3DSA:3.30.70.270 355 521 7.7E-42 T 14-10-2018 JV59_35385 86a44cdb4d6efe610b1885b211584023 521 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 361 519 1.3E-36 T 14-10-2018 IPR000160 GGDEF domain JV59_25075 4f954725b652468eab0e4845c405a160 633 SUPERFAMILY SSF58104 323 632 2.35E-68 T 14-10-2018 JV59_25075 4f954725b652468eab0e4845c405a160 633 Pfam PF02743 Cache domain 37 261 6.4E-15 T 14-10-2018 IPR033479 Double Cache domain 1 JV59_25075 4f954725b652468eab0e4845c405a160 633 Gene3D G3DSA:3.30.450.20 66 171 1.1E-10 T 14-10-2018 JV59_25075 4f954725b652468eab0e4845c405a160 633 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 418 598 5.1E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_25075 4f954725b652468eab0e4845c405a160 633 Gene3D G3DSA:3.30.450.20 54 275 1.1E-10 T 14-10-2018 JV59_25075 4f954725b652468eab0e4845c405a160 633 Pfam PF00672 HAMP domain 305 351 9.5E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_25075 4f954725b652468eab0e4845c405a160 633 SMART SM00283 370 631 4.2E-59 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_25075 4f954725b652468eab0e4845c405a160 633 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 280 300 9.4E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_25075 4f954725b652468eab0e4845c405a160 633 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 468 495 9.4E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_25075 4f954725b652468eab0e4845c405a160 633 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 497 526 9.4E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_25075 4f954725b652468eab0e4845c405a160 633 Gene3D G3DSA:1.10.287.950 303 633 2.1E-65 T 14-10-2018 JV59_25075 4f954725b652468eab0e4845c405a160 633 SMART SM00304 390 450 36.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_25075 4f954725b652468eab0e4845c405a160 633 SMART SM00304 301 355 4.3E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_36190 cca43aded45f0604aa7b3f177ddc6864 100 Gene3D G3DSA:3.40.50.2300 1 100 3.6E-38 T 14-10-2018 JV59_36190 cca43aded45f0604aa7b3f177ddc6864 100 SUPERFAMILY SSF52794 2 97 1.43E-34 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 JV59_36190 cca43aded45f0604aa7b3f177ddc6864 100 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 95 4.4E-21 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 JV59_36190 cca43aded45f0604aa7b3f177ddc6864 100 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 87 1.3E-31 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 JV59_19975 28def1cd40e98160657c50d8dbe69996 563 Pfam PF02652 L-lactate permease 7 548 3.3E-107 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 JV59_19975 28def1cd40e98160657c50d8dbe69996 563 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 552 4.3E-105 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 JV59_17905 8d05369e589632bb7744b33906696997 243 Gene3D G3DSA:3.40.50.1820 14 241 7.6E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_17905 8d05369e589632bb7744b33906696997 243 Pfam PF01738 Dienelactone hydrolase family 40 239 7.2E-41 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 JV59_17905 8d05369e589632bb7744b33906696997 243 SUPERFAMILY SSF53474 25 239 2.01E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_10175 4a3b5bf25c3af53da332f62e31490c26 225 Gene3D G3DSA:3.40.50.300 47 157 1.7E-31 T 14-10-2018 JV59_10175 4a3b5bf25c3af53da332f62e31490c26 225 Pfam PF03846 Cell division inhibitor SulA 52 129 8.2E-5 T 14-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 JV59_10175 4a3b5bf25c3af53da332f62e31490c26 225 SUPERFAMILY SSF52540 45 156 1.29E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_10175 4a3b5bf25c3af53da332f62e31490c26 225 PIRSF PIRSF037290 1 219 6.6E-59 T 14-10-2018 IPR017166 Uncharacterised conserved protein UCP037290 JV59_26620 b4d4c74b9a36c6c0ffbdf313683706c0 146 Gene3D G3DSA:3.40.630.30 2 145 3.2E-39 T 14-10-2018 JV59_26620 b4d4c74b9a36c6c0ffbdf313683706c0 146 Pfam PF00583 Acetyltransferase (GNAT) family 12 119 2.2E-14 T 14-10-2018 IPR000182 GNAT domain JV59_26620 b4d4c74b9a36c6c0ffbdf313683706c0 146 SUPERFAMILY SSF55729 1 143 1.28E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_26620 b4d4c74b9a36c6c0ffbdf313683706c0 146 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 10 141 5.7E-38 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 JV59_16055 bd596021bad7e0bbbffc96fb4b8311c4 403 Pfam PF04055 Radical SAM superfamily 163 310 1.5E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JV59_16055 bd596021bad7e0bbbffc96fb4b8311c4 403 SMART SM00729 159 367 7.1E-9 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JV59_16055 bd596021bad7e0bbbffc96fb4b8311c4 403 SUPERFAMILY SSF102114 159 358 8.24E-30 T 14-10-2018 JV59_16055 bd596021bad7e0bbbffc96fb4b8311c4 403 Gene3D G3DSA:3.80.30.20 159 361 5.3E-24 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe JV59_35900 5282b91c12dfb298d5d7ee716cdff32e 443 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 357 2.4E-137 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 JV59_35900 5282b91c12dfb298d5d7ee716cdff32e 443 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 5.7E-31 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 JV59_35900 5282b91c12dfb298d5d7ee716cdff32e 443 Pfam PF02601 Exonuclease VII, large subunit 126 440 4.7E-103 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 JV59_35900 5282b91c12dfb298d5d7ee716cdff32e 443 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 31.299 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 JV59_22105 fbd797bbc368bbdd0e6ab4d309222f8a 102 Gene3D G3DSA:3.30.70.100 1 93 4.6E-20 T 14-10-2018 JV59_22105 fbd797bbc368bbdd0e6ab4d309222f8a 102 SUPERFAMILY SSF54909 1 91 3.91E-18 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_22105 fbd797bbc368bbdd0e6ab4d309222f8a 102 Pfam PF07045 Domain of unknown function (DUF1330) 3 92 3.5E-18 T 14-10-2018 IPR010753 Domain of unknown function DUF1330 JV59_31000 de95209d10fd4e1fbfb80de2f160cb4f 553 Pfam PF12838 4Fe-4S dicluster domain 185 231 9.3E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JV59_31000 de95209d10fd4e1fbfb80de2f160cb4f 553 Gene3D G3DSA:3.30.70.20 171 254 2.1E-12 T 14-10-2018 JV59_31000 de95209d10fd4e1fbfb80de2f160cb4f 553 SUPERFAMILY SSF54862 143 507 7.96E-38 T 14-10-2018 JV59_31000 de95209d10fd4e1fbfb80de2f160cb4f 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 451 462 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JV59_31000 de95209d10fd4e1fbfb80de2f160cb4f 553 Gene3D G3DSA:3.30.70.20 415 486 2.1E-11 T 14-10-2018 JV59_31000 de95209d10fd4e1fbfb80de2f160cb4f 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 420 431 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JV59_31000 de95209d10fd4e1fbfb80de2f160cb4f 553 Pfam PF13187 4Fe-4S dicluster domain 419 464 2.3E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JV59_30490 7b005d6bb9ba85fe221203be8d6769c9 268 Pfam PF05023 Phytochelatin synthase 23 266 4.4E-44 T 14-10-2018 IPR007719 Phytochelatin synthase, N-terminal catalytic domain GO:0010038|GO:0016756|GO:0046872|GO:0046938 MetaCyc: PWY-6745 JV59_30490 7b005d6bb9ba85fe221203be8d6769c9 268 SUPERFAMILY SSF54001 24 267 3.73E-40 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily JV59_18870 d76d263a1d0f522aed2fbb9c94fc07d5 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 132 148 7.5E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_18870 d76d263a1d0f522aed2fbb9c94fc07d5 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 8 19 7.5E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_18870 d76d263a1d0f522aed2fbb9c94fc07d5 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 170 7.5E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_18870 d76d263a1d0f522aed2fbb9c94fc07d5 199 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 8 188 8.5E-56 T 14-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase JV59_18870 d76d263a1d0f522aed2fbb9c94fc07d5 199 Gene3D G3DSA:1.10.150.240 21 91 1.4E-43 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JV59_18870 d76d263a1d0f522aed2fbb9c94fc07d5 199 Gene3D G3DSA:3.40.50.1000 10 190 1.4E-43 T 14-10-2018 IPR023214 HAD superfamily JV59_18870 d76d263a1d0f522aed2fbb9c94fc07d5 199 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 188 1.3E-29 T 14-10-2018 JV59_18870 d76d263a1d0f522aed2fbb9c94fc07d5 199 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 127 188 7.5E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_18870 d76d263a1d0f522aed2fbb9c94fc07d5 199 SUPERFAMILY SSF56784 7 193 2.71E-43 T 14-10-2018 IPR036412 HAD-like superfamily JV59_20870 b8f133f7aee79acbac1d12837f4218ea 487 Pfam PF01458 Uncharacterized protein family (UPF0051) 225 458 1.7E-66 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 JV59_20870 b8f133f7aee79acbac1d12837f4218ea 487 SUPERFAMILY SSF101960 39 484 4.05E-132 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily JV59_20870 b8f133f7aee79acbac1d12837f4218ea 487 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 19 478 7.9E-195 T 14-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 JV59_37315 75e2523e4b46d6b1eece0fe9dac2b113 391 Pfam PF05987 Bacterial protein of unknown function (DUF898) 8 383 1.8E-91 T 14-10-2018 IPR010295 Protein of unknown function DUF898 JV59_30285 5e92bac66a7bacecf033b088e9514897 92 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 75 2.3E-10 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JV59_30285 5e92bac66a7bacecf033b088e9514897 92 SUPERFAMILY SSF54292 4 85 3.41E-21 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JV59_30285 5e92bac66a7bacecf033b088e9514897 92 Gene3D G3DSA:3.10.20.30 2 90 2.6E-18 T 14-10-2018 IPR012675 Beta-grasp domain superfamily JV59_30285 5e92bac66a7bacecf033b088e9514897 92 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 JV59_26605 3539988fb0da9476d80ff540d66d4cae 113 SUPERFAMILY SSF89360 7 99 2.35E-29 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 JV59_26605 3539988fb0da9476d80ff540d66d4cae 113 Gene3D G3DSA:2.60.300.12 8 113 5.5E-32 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 JV59_26605 3539988fb0da9476d80ff540d66d4cae 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 35.882 T 14-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 JV59_26605 3539988fb0da9476d80ff540d66d4cae 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 JV59_26605 3539988fb0da9476d80ff540d66d4cae 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 8 113 9.6E-37 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 JV59_26605 3539988fb0da9476d80ff540d66d4cae 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 1.3E-18 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 JV59_17845 9abc5e8bedb6b61bfbb21ffe230a1d5d 110 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 17 108 6.9E-30 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 JV59_17845 9abc5e8bedb6b61bfbb21ffe230a1d5d 110 Gene3D G3DSA:3.30.1360.20 15 110 2.6E-31 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 JV59_17845 9abc5e8bedb6b61bfbb21ffe230a1d5d 110 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 14 109 21.487 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 JV59_17845 9abc5e8bedb6b61bfbb21ffe230a1d5d 110 SUPERFAMILY SSF55248 16 109 1.7E-32 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 JV59_20085 b92687d20481f0f19d6b1d8e5d2165df 194 Gene3D G3DSA:3.60.40.10 4 190 1.5E-25 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JV59_20085 b92687d20481f0f19d6b1d8e5d2165df 194 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 29 191 7.3E-6 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JV59_20085 b92687d20481f0f19d6b1d8e5d2165df 194 SUPERFAMILY SSF81606 4 191 3.92E-7 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JV59_19575 59d5b1d9babeb4af8485544f14a66c26 918 SUPERFAMILY SSF55486 211 385 6.29E-20 T 14-10-2018 JV59_19575 59d5b1d9babeb4af8485544f14a66c26 918 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 119 427 1.9E-80 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 JV59_19575 59d5b1d9babeb4af8485544f14a66c26 918 Pfam PF05547 Immune inhibitor A peptidase M6 107 747 7.6E-272 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 JV59_19575 59d5b1d9babeb4af8485544f14a66c26 918 PIRSF PIRSF007519 1 754 0.0 T 14-10-2018 IPR012300 Peptidase M6, InhA JV59_19575 59d5b1d9babeb4af8485544f14a66c26 918 SUPERFAMILY SSF49299 756 837 3.79E-21 T 14-10-2018 IPR035986 PKD domain superfamily JV59_19575 59d5b1d9babeb4af8485544f14a66c26 918 Gene3D G3DSA:2.60.40.10 753 837 1.2E-29 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_19575 59d5b1d9babeb4af8485544f14a66c26 918 Gene3D G3DSA:2.60.40.10 838 918 3.2E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_19575 59d5b1d9babeb4af8485544f14a66c26 918 SUPERFAMILY SSF49299 841 916 1.83E-8 T 14-10-2018 IPR035986 PKD domain superfamily JV59_19575 59d5b1d9babeb4af8485544f14a66c26 918 Pfam PF00801 PKD domain 777 824 2.7E-11 T 14-10-2018 IPR000601 PKD domain JV59_19575 59d5b1d9babeb4af8485544f14a66c26 918 Pfam PF00801 PKD domain 843 907 1.2E-7 T 14-10-2018 IPR000601 PKD domain JV59_19575 59d5b1d9babeb4af8485544f14a66c26 918 SMART SM00089 760 838 4.8E-19 T 14-10-2018 IPR022409 PKD/Chitinase domain JV59_19575 59d5b1d9babeb4af8485544f14a66c26 918 SMART SM00089 841 917 5.6E-8 T 14-10-2018 IPR022409 PKD/Chitinase domain JV59_18420 905c61391736d6d45d582999e46ac8e5 125 SMART SM00422 4 71 6.6E-21 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_18420 905c61391736d6d45d582999e46ac8e5 125 SUPERFAMILY SSF46955 4 118 3.52E-26 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily JV59_18420 905c61391736d6d45d582999e46ac8e5 125 Pfam PF13411 MerR HTH family regulatory protein 4 69 5.6E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_18420 905c61391736d6d45d582999e46ac8e5 125 Gene3D G3DSA:1.10.1660.10 3 125 3.0E-26 T 14-10-2018 JV59_35755 f9ffd52c67ae80a6a6bf7e31b7f67902 117 Pfam PF03658 RnfH family Ubiquitin 8 90 7.1E-33 T 14-10-2018 IPR005346 RnfH protein JV59_35755 f9ffd52c67ae80a6a6bf7e31b7f67902 117 SUPERFAMILY SSF54285 6 82 9.16E-25 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp JV59_35755 f9ffd52c67ae80a6a6bf7e31b7f67902 117 Gene3D G3DSA:3.10.20.280 2 92 8.2E-33 T 14-10-2018 IPR037021 RnfH superfamily JV59_35755 f9ffd52c67ae80a6a6bf7e31b7f67902 117 Hamap MF_00460 Protein RnfH [rnfH]. 8 98 24.519 T 14-10-2018 IPR005346 RnfH protein JV59_28890 163c438bf6839f4910284d840fab7d03 205 SUPERFAMILY SSF101322 2 204 3.53E-80 T 14-10-2018 IPR035932 HflD-like superfamily JV59_28890 163c438bf6839f4910284d840fab7d03 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 3.0E-97 T 14-10-2018 JV59_28890 163c438bf6839f4910284d840fab7d03 205 Gene3D G3DSA:1.10.3890.10 1 205 7.5E-78 T 14-10-2018 IPR035932 HflD-like superfamily JV59_28890 163c438bf6839f4910284d840fab7d03 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 3.0E-77 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD JV59_28890 163c438bf6839f4910284d840fab7d03 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 35.95 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD JV59_28020 f6b1d529ad339a64dc97f3ee4531caa5 169 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 4 165 4.3E-62 T 14-10-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) JV59_22855 0b1bb66f0c88242225bcbc755c62328e 229 Hamap MF_01385 Urease accessory protein UreF [ureF]. 11 229 30.305 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 JV59_22855 0b1bb66f0c88242225bcbc755c62328e 229 Pfam PF01730 UreF 46 186 6.8E-34 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 JV59_22855 0b1bb66f0c88242225bcbc755c62328e 229 PIRSF PIRSF009467 8 229 4.5E-59 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 JV59_22855 0b1bb66f0c88242225bcbc755c62328e 229 Gene3D G3DSA:1.10.4190.10 6 205 9.2E-51 T 14-10-2018 IPR038277 UreF domain superfamily JV59_16020 db9104df5603f82ca7b26bf822a3d6c2 282 SUPERFAMILY SSF161098 11 277 9.81E-57 T 14-10-2018 IPR035906 MetI-like superfamily JV59_16020 db9104df5603f82ca7b26bf822a3d6c2 282 Gene3D G3DSA:1.10.3720.10 16 279 4.2E-52 T 14-10-2018 IPR035906 MetI-like superfamily JV59_16020 db9104df5603f82ca7b26bf822a3d6c2 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 273 2.9E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_26590 bc082f4b1c89d106f00459dc3a126c0d 123 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 2.0E-43 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 JV59_26590 bc082f4b1c89d106f00459dc3a126c0d 123 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 120 5.3E-38 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 JV59_26590 bc082f4b1c89d106f00459dc3a126c0d 123 PIRSF PIRSF006287 1 123 1.7E-41 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 JV59_26590 bc082f4b1c89d106f00459dc3a126c0d 123 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 122 27.182 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 JV59_17805 35cf6f03879ac076543f562d772803cf 233 SMART SM00448 9 125 8.9E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_17805 35cf6f03879ac076543f562d772803cf 233 SUPERFAMILY SSF52172 7 143 2.28E-32 T 14-10-2018 IPR011006 CheY-like superfamily JV59_17805 35cf6f03879ac076543f562d772803cf 233 Gene3D G3DSA:3.40.50.2300 4 157 8.3E-32 T 14-10-2018 JV59_17805 35cf6f03879ac076543f562d772803cf 233 Pfam PF00072 Response regulator receiver domain 11 125 2.7E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_36905 82ed0433eed2aa0c991e8b3621732269 266 SUPERFAMILY SSF101386 139 238 4.86E-23 T 14-10-2018 JV59_36905 82ed0433eed2aa0c991e8b3621732269 266 Gene3D G3DSA:1.10.287.1080 132 265 1.0E-45 T 14-10-2018 JV59_36905 82ed0433eed2aa0c991e8b3621732269 266 SUPERFAMILY SSF101386 3 105 1.13E-23 T 14-10-2018 JV59_36905 82ed0433eed2aa0c991e8b3621732269 266 TIGRFAM TIGR00444 mazG: MazG family protein 11 260 1.7E-103 T 14-10-2018 IPR011551 NTP pyrophosphohydrolase MazG JV59_36905 82ed0433eed2aa0c991e8b3621732269 266 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 172 231 2.1E-6 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core JV59_36905 82ed0433eed2aa0c991e8b3621732269 266 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 4.0E-27 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core JV59_36905 82ed0433eed2aa0c991e8b3621732269 266 Gene3D G3DSA:1.10.287.1080 2 126 7.0E-45 T 14-10-2018 JV59_19320 e536c590edb4d35c60a7fa5c6a7d31c2 338 SUPERFAMILY SSF51735 1 335 5.21E-98 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_19320 e536c590edb4d35c60a7fa5c6a7d31c2 338 Gene3D G3DSA:3.90.25.10 193 328 3.2E-143 T 14-10-2018 JV59_19320 e536c590edb4d35c60a7fa5c6a7d31c2 338 Gene3D G3DSA:3.40.50.720 3 273 3.2E-143 T 14-10-2018 JV59_19320 e536c590edb4d35c60a7fa5c6a7d31c2 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 8.0E-63 T 14-10-2018 IPR016040 NAD(P)-binding domain JV59_19320 e536c590edb4d35c60a7fa5c6a7d31c2 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 2.9E-143 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 JV59_25400 f35a78effcd68df9a95d4b6ad3f95a68 81 Gene3D G3DSA:3.20.20.60 1 79 7.3E-18 T 14-10-2018 JV59_25400 f35a78effcd68df9a95d4b6ad3f95a68 81 SUPERFAMILY SSF51621 1 75 2.0E-16 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JV59_25400 f35a78effcd68df9a95d4b6ad3f95a68 81 Pfam PF13714 Phosphoenolpyruvate phosphomutase 2 76 1.0E-18 T 14-10-2018 JV59_23230 150c4fbc1639d954317e5b99199bb811 391 Pfam PF00155 Aminotransferase class I and II 70 375 3.0E-39 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JV59_23230 150c4fbc1639d954317e5b99199bb811 391 Gene3D G3DSA:3.40.640.10 62 284 2.3E-113 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_23230 150c4fbc1639d954317e5b99199bb811 391 SUPERFAMILY SSF53383 15 389 9.82E-85 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_23230 150c4fbc1639d954317e5b99199bb811 391 Gene3D G3DSA:3.90.1150.10 27 378 2.3E-113 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_19835 f53c96125500c1223678e45f109444ca 635 Gene3D G3DSA:3.30.70.270 451 631 4.2E-51 T 14-10-2018 JV59_19835 f53c96125500c1223678e45f109444ca 635 Gene3D G3DSA:1.10.3430.10 3 421 4.5E-129 T 14-10-2018 IPR029020 Ammonium/urea transporter JV59_19835 f53c96125500c1223678e45f109444ca 635 SMART SM00267 454 629 9.7E-57 T 14-10-2018 IPR000160 GGDEF domain JV59_19835 f53c96125500c1223678e45f109444ca 635 SUPERFAMILY SSF55073 470 631 2.12E-42 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_19835 f53c96125500c1223678e45f109444ca 635 Pfam PF00990 Diguanylate cyclase, GGDEF domain 465 625 3.6E-46 T 14-10-2018 IPR000160 GGDEF domain JV59_19835 f53c96125500c1223678e45f109444ca 635 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 463 628 3.7E-46 T 14-10-2018 IPR000160 GGDEF domain JV59_19835 f53c96125500c1223678e45f109444ca 635 SUPERFAMILY SSF111352 10 388 8.24E-105 T 14-10-2018 JV59_19835 f53c96125500c1223678e45f109444ca 635 Pfam PF00909 Ammonium Transporter Family 15 405 4.1E-112 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 JV59_19835 f53c96125500c1223678e45f109444ca 635 TIGRFAM TIGR00836 amt: ammonium transporter 14 405 5.4E-118 T 14-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 JV59_24450 9413d940034e0b2a44bb94060f374356 280 Pfam PF11236 Protein of unknown function (DUF3037) 7 127 1.3E-19 T 14-10-2018 IPR021398 Protein of unknown function DUF3037 JV59_02375 9ab9280f28b6cd5f38ea448c673e6214 415 Hamap MF_01063 Esterase FrsA [frsA]. 4 415 54.925 T 14-10-2018 IPR010520 UPF0255 family JV59_02375 9ab9280f28b6cd5f38ea448c673e6214 415 Gene3D G3DSA:3.40.50.1820 18 415 1.6E-112 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_02375 9ab9280f28b6cd5f38ea448c673e6214 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 5 413 2.6E-224 T 14-10-2018 IPR010520 UPF0255 family JV59_02375 9ab9280f28b6cd5f38ea448c673e6214 415 SUPERFAMILY SSF53474 46 411 1.21E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_25940 f152bdddae13361d2dd48c07caec997e 129 Gene3D G3DSA:1.20.120.550 2 128 2.0E-18 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily JV59_25940 f152bdddae13361d2dd48c07caec997e 129 Pfam PF01124 MAPEG family 4 127 1.3E-21 T 14-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein JV59_25940 f152bdddae13361d2dd48c07caec997e 129 SUPERFAMILY SSF161084 3 124 8.63E-25 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily JV59_28785 ab742eba2dc9d4529aed1c6a2f2731fc 705 Gene3D G3DSA:3.30.450.20 65 334 1.7E-25 T 14-10-2018 JV59_28785 ab742eba2dc9d4529aed1c6a2f2731fc 705 Pfam PF02743 Cache domain 48 324 2.6E-17 T 14-10-2018 IPR033479 Double Cache domain 1 JV59_28785 ab742eba2dc9d4529aed1c6a2f2731fc 705 SMART SM00304 374 428 9.6E-16 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_28785 ab742eba2dc9d4529aed1c6a2f2731fc 705 SUPERFAMILY SSF58104 396 705 6.54E-77 T 14-10-2018 JV59_28785 ab742eba2dc9d4529aed1c6a2f2731fc 705 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 490 671 2.2E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_28785 ab742eba2dc9d4529aed1c6a2f2731fc 705 Pfam PF00672 HAMP domain 375 424 2.1E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_28785 ab742eba2dc9d4529aed1c6a2f2731fc 705 SMART SM00283 443 704 2.3E-67 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_28785 ab742eba2dc9d4529aed1c6a2f2731fc 705 Gene3D G3DSA:3.30.450.20 73 233 1.7E-25 T 14-10-2018 JV59_28785 ab742eba2dc9d4529aed1c6a2f2731fc 705 Gene3D G3DSA:1.10.287.950 373 705 3.7E-71 T 14-10-2018 JV59_27660 3598f91a3603d8dd78303b5b0a2a8a98 120 Pfam PF00460 Flagella basal body rod protein 14 38 6.3E-7 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 JV59_27660 3598f91a3603d8dd78303b5b0a2a8a98 120 PIRSF PIRSF002889 1 120 1.8E-32 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 JV59_27660 3598f91a3603d8dd78303b5b0a2a8a98 120 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 118 2.2E-32 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 JV59_27660 3598f91a3603d8dd78303b5b0a2a8a98 120 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site JV59_00845 6c88514178e1aff5254e31e36c794756 306 Pfam PF04960 Glutaminase 22 306 2.0E-111 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 JV59_00845 6c88514178e1aff5254e31e36c794756 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 47.347 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 JV59_00845 6c88514178e1aff5254e31e36c794756 306 SUPERFAMILY SSF56601 3 306 1.27E-114 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JV59_00845 6c88514178e1aff5254e31e36c794756 306 Gene3D G3DSA:3.40.710.10 1 306 3.6E-109 T 14-10-2018 JV59_00845 6c88514178e1aff5254e31e36c794756 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 2.5E-129 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 JV59_32855 ba11a94fd8363419c0cf207db3929b4a 158 Gene3D G3DSA:3.40.630.30 1 156 2.2E-22 T 14-10-2018 JV59_32855 ba11a94fd8363419c0cf207db3929b4a 158 SUPERFAMILY SSF55729 1 152 3.09E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_32855 ba11a94fd8363419c0cf207db3929b4a 158 Pfam PF00583 Acetyltransferase (GNAT) family 44 137 1.6E-12 T 14-10-2018 IPR000182 GNAT domain JV59_26190 917e29bff26b5c953ba052d4f984c212 245 Pfam PF10986 Protein of unknown function (DUF2796) 29 241 7.3E-40 T 14-10-2018 IPR021253 Protein of unknown function DUF2796 JV59_32430 8cad9a0813195a2bf89c450f0ed6a47c 121 Pfam PF03788 LrgA family 20 111 1.2E-26 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 JV59_32430 8cad9a0813195a2bf89c450f0ed6a47c 121 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 1 120 21.46 T 14-10-2018 IPR022957 Uncharacterised protein family UPF0299 JV59_16855 a798ffb782a4adcc0db8ba77ad7a13cb 91 SUPERFAMILY SSF47336 10 78 4.84E-17 T 14-10-2018 IPR036736 ACP-like superfamily JV59_16855 a798ffb782a4adcc0db8ba77ad7a13cb 91 Pfam PF00550 Phosphopantetheine attachment site 15 76 1.1E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain JV59_16855 a798ffb782a4adcc0db8ba77ad7a13cb 91 Gene3D G3DSA:1.10.1200.10 4 83 5.7E-19 T 14-10-2018 IPR036736 ACP-like superfamily JV59_21365 47050fba71f981ebd01d39f13b198bb6 159 Gene3D G3DSA:3.90.960.10 15 155 1.9E-38 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 JV59_21365 47050fba71f981ebd01d39f13b198bb6 159 SUPERFAMILY SSF55826 5 146 1.83E-28 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 JV59_21365 47050fba71f981ebd01d39f13b198bb6 159 Pfam PF04073 Aminoacyl-tRNA editing domain 35 143 8.3E-18 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 JV59_16295 13e410b8ef51e89e8867c533813f906c 145 Gene3D G3DSA:3.10.129.10 2 138 4.2E-38 T 14-10-2018 JV59_16295 13e410b8ef51e89e8867c533813f906c 145 SUPERFAMILY SSF54637 9 135 1.21E-31 T 14-10-2018 IPR029069 HotDog domain superfamily JV59_16295 13e410b8ef51e89e8867c533813f906c 145 Pfam PF13279 Thioesterase-like superfamily 16 134 1.1E-21 T 14-10-2018 JV59_18190 7c02068b16c456931f832b4888ff1773 535 SUPERFAMILY SSF55073 110 255 1.73E-40 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_18190 7c02068b16c456931f832b4888ff1773 535 SMART SM00267 94 260 2.1E-38 T 14-10-2018 IPR000160 GGDEF domain JV59_18190 7c02068b16c456931f832b4888ff1773 535 Pfam PF00990 Diguanylate cyclase, GGDEF domain 105 254 5.4E-37 T 14-10-2018 IPR000160 GGDEF domain JV59_18190 7c02068b16c456931f832b4888ff1773 535 SUPERFAMILY SSF141868 276 527 2.09E-78 T 14-10-2018 IPR035919 EAL domain superfamily JV59_18190 7c02068b16c456931f832b4888ff1773 535 Gene3D G3DSA:3.20.20.450 272 527 2.4E-83 T 14-10-2018 IPR035919 EAL domain superfamily JV59_18190 7c02068b16c456931f832b4888ff1773 535 Gene3D G3DSA:3.30.70.270 101 271 2.8E-47 T 14-10-2018 JV59_18190 7c02068b16c456931f832b4888ff1773 535 Pfam PF00563 EAL domain 276 509 1.0E-68 T 14-10-2018 IPR001633 EAL domain JV59_18190 7c02068b16c456931f832b4888ff1773 535 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 103 255 3.8E-32 T 14-10-2018 IPR000160 GGDEF domain JV59_18190 7c02068b16c456931f832b4888ff1773 535 SMART SM00052 270 515 2.6E-89 T 14-10-2018 IPR001633 EAL domain JV59_25425 34dfb76b284e214b9ea02887126507a2 357 Gene3D G3DSA:3.40.50.2300 78 323 6.9E-60 T 14-10-2018 JV59_25425 34dfb76b284e214b9ea02887126507a2 357 SUPERFAMILY SSF53822 60 329 1.94E-47 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_25425 34dfb76b284e214b9ea02887126507a2 357 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 2.2E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_25425 34dfb76b284e214b9ea02887126507a2 357 Pfam PF13377 Periplasmic binding protein-like domain 171 332 1.8E-29 T 14-10-2018 JV59_25425 34dfb76b284e214b9ea02887126507a2 357 Gene3D G3DSA:1.10.260.40 2 61 3.5E-22 T 14-10-2018 JV59_25425 34dfb76b284e214b9ea02887126507a2 357 SMART SM00354 2 72 1.2E-25 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_25425 34dfb76b284e214b9ea02887126507a2 357 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 4.2E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_25425 34dfb76b284e214b9ea02887126507a2 357 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 4.2E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_25425 34dfb76b284e214b9ea02887126507a2 357 Gene3D G3DSA:3.40.50.2300 161 327 6.9E-60 T 14-10-2018 JV59_25425 34dfb76b284e214b9ea02887126507a2 357 SUPERFAMILY SSF47413 3 60 4.06E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_20095 d5865459ae1d79f03dc40ddc809f7d70 117 SUPERFAMILY SSF52091 5 115 5.69E-9 T 14-10-2018 IPR036513 STAS domain superfamily JV59_20095 d5865459ae1d79f03dc40ddc809f7d70 117 Gene3D G3DSA:3.30.750.24 1 117 1.1E-20 T 14-10-2018 IPR036513 STAS domain superfamily JV59_37515 00d38efd757edfc01265c9a5c043035a 451 TIGRFAM TIGR00400 mgtE: magnesium transporter 20 451 9.0E-86 T 14-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 JV59_37515 00d38efd757edfc01265c9a5c043035a 451 Gene3D G3DSA:1.25.60.10 8 134 5.4E-19 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily JV59_37515 00d38efd757edfc01265c9a5c043035a 451 Pfam PF03448 MgtE intracellular N domain 36 137 1.1E-25 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain JV59_37515 00d38efd757edfc01265c9a5c043035a 451 SUPERFAMILY SSF54631 138 278 4.8E-27 T 14-10-2018 JV59_37515 00d38efd757edfc01265c9a5c043035a 451 SUPERFAMILY SSF161093 280 450 1.83E-43 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 JV59_37515 00d38efd757edfc01265c9a5c043035a 451 Gene3D G3DSA:1.10.357.20 277 451 1.0E-44 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain JV59_37515 00d38efd757edfc01265c9a5c043035a 451 Pfam PF01769 Divalent cation transporter 323 444 3.3E-23 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 JV59_37515 00d38efd757edfc01265c9a5c043035a 451 Gene3D G3DSA:3.10.580.10 135 262 4.1E-37 T 14-10-2018 JV59_37515 00d38efd757edfc01265c9a5c043035a 451 SUPERFAMILY SSF158791 12 136 1.83E-30 T 14-10-2018 JV59_37515 00d38efd757edfc01265c9a5c043035a 451 SMART SM00924 36 139 1.1E-35 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain JV59_37515 00d38efd757edfc01265c9a5c043035a 451 Pfam PF00571 CBS domain 217 257 6.6E-4 T 14-10-2018 IPR000644 CBS domain JV59_37515 00d38efd757edfc01265c9a5c043035a 451 Pfam PF00571 CBS domain 140 195 9.1E-4 T 14-10-2018 IPR000644 CBS domain JV59_16110 96d3f2ada9027fcf77617bc09e90c3f1 138 SUPERFAMILY SSF55298 5 135 7.7E-23 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_16110 96d3f2ada9027fcf77617bc09e90c3f1 138 Gene3D G3DSA:3.30.1330.40 8 136 6.2E-23 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_16110 96d3f2ada9027fcf77617bc09e90c3f1 138 Pfam PF01042 Endoribonuclease L-PSP 30 134 4.5E-17 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 JV59_27410 22d1024cbfa68caa9abdf836390e46c1 379 PRINTS PR00207 Flagellin signature 111 134 1.1E-25 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JV59_27410 22d1024cbfa68caa9abdf836390e46c1 379 PRINTS PR00207 Flagellin signature 76 95 1.1E-25 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JV59_27410 22d1024cbfa68caa9abdf836390e46c1 379 PRINTS PR00207 Flagellin signature 37 54 1.1E-25 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JV59_27410 22d1024cbfa68caa9abdf836390e46c1 379 Gene3D G3DSA:1.20.1330.10 44 328 2.9E-78 T 14-10-2018 JV59_27410 22d1024cbfa68caa9abdf836390e46c1 379 Gene3D G3DSA:3.30.70.2120 174 277 2.9E-78 T 14-10-2018 JV59_27410 22d1024cbfa68caa9abdf836390e46c1 379 Gene3D G3DSA:1.10.8.410 329 379 3.1E-22 T 14-10-2018 JV59_27410 22d1024cbfa68caa9abdf836390e46c1 379 Pfam PF07196 Flagellin hook IN motif 197 248 1.8E-9 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 JV59_27410 22d1024cbfa68caa9abdf836390e46c1 379 SUPERFAMILY SSF64518 1 379 1.83E-99 T 14-10-2018 JV59_27410 22d1024cbfa68caa9abdf836390e46c1 379 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.5E-42 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JV59_27410 22d1024cbfa68caa9abdf836390e46c1 379 Pfam PF00700 Bacterial flagellin C-terminal helical region 294 378 9.8E-27 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JV59_02750 721adb6ded572a554b242170e5ab6196 627 SUPERFAMILY SSF56519 57 253 4.84E-55 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 JV59_02750 721adb6ded572a554b242170e5ab6196 627 Gene3D G3DSA:3.90.1310.10 65 249 3.2E-52 T 14-10-2018 JV59_02750 721adb6ded572a554b242170e5ab6196 627 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 615 2.7E-73 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 JV59_02750 721adb6ded572a554b242170e5ab6196 627 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 21 619 8.5E-237 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JV59_02750 721adb6ded572a554b242170e5ab6196 627 Gene3D G3DSA:3.30.1390.30 86 161 3.2E-52 T 14-10-2018 JV59_02750 721adb6ded572a554b242170e5ab6196 627 SUPERFAMILY SSF56601 255 619 1.07E-92 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JV59_02750 721adb6ded572a554b242170e5ab6196 627 Gene3D G3DSA:3.40.710.10 250 627 5.0E-93 T 14-10-2018 JV59_02750 721adb6ded572a554b242170e5ab6196 627 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 623 52.859 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JV59_02750 721adb6ded572a554b242170e5ab6196 627 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 1.6E-49 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 JV59_20755 3f272f8c0b9cdb76334547753c49dcc9 462 Pfam PF11884 Domain of unknown function (DUF3404) 17 265 5.4E-77 T 14-10-2018 IPR021821 Protein of unknown function DUF3404 JV59_20755 3f272f8c0b9cdb76334547753c49dcc9 462 SMART SM00387 365 462 3.1E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_20755 3f272f8c0b9cdb76334547753c49dcc9 462 Gene3D G3DSA:3.30.565.10 331 462 1.8E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_20755 3f272f8c0b9cdb76334547753c49dcc9 462 SUPERFAMILY SSF47384 255 320 2.75E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_20755 3f272f8c0b9cdb76334547753c49dcc9 462 Gene3D G3DSA:1.10.287.130 256 329 9.1E-6 T 14-10-2018 JV59_20755 3f272f8c0b9cdb76334547753c49dcc9 462 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 373 461 7.8E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_20755 3f272f8c0b9cdb76334547753c49dcc9 462 SUPERFAMILY SSF55874 336 461 7.53E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_19145 9bab6879287f631ec83acad3b8cbf2d3 150 SUPERFAMILY SSF54637 1 140 3.39E-28 T 14-10-2018 IPR029069 HotDog domain superfamily JV59_19145 9bab6879287f631ec83acad3b8cbf2d3 150 Gene3D G3DSA:3.10.129.10 1 146 2.3E-56 T 14-10-2018 JV59_19145 9bab6879287f631ec83acad3b8cbf2d3 150 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 135 2.7E-37 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 JV59_19145 9bab6879287f631ec83acad3b8cbf2d3 150 Pfam PF03061 Thioesterase superfamily 52 128 8.4E-14 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 JV59_37495 54ac9ec419f173dc7062d442215f1b77 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 2.4E-28 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 JV59_37495 54ac9ec419f173dc7062d442215f1b77 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 7.3E-34 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 JV59_37495 54ac9ec419f173dc7062d442215f1b77 95 Gene3D G3DSA:3.30.160.100 1 95 6.1E-39 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like JV59_37495 54ac9ec419f173dc7062d442215f1b77 95 SUPERFAMILY SSF69754 1 95 3.27E-35 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like JV59_37935 61a1f82e8a98ac4b62178b555d09691b 212 SUPERFAMILY SSF81901 66 177 9.29E-22 T 14-10-2018 JV59_37935 61a1f82e8a98ac4b62178b555d09691b 212 Pfam PF08238 Sel1 repeat 109 144 1.7E-5 T 14-10-2018 IPR006597 Sel1-like repeat JV59_37935 61a1f82e8a98ac4b62178b555d09691b 212 Pfam PF08238 Sel1 repeat 77 107 0.028 T 14-10-2018 IPR006597 Sel1-like repeat JV59_37935 61a1f82e8a98ac4b62178b555d09691b 212 Gene3D G3DSA:1.25.40.10 24 212 1.7E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_37935 61a1f82e8a98ac4b62178b555d09691b 212 SMART SM00671 73 108 0.0061 T 14-10-2018 IPR006597 Sel1-like repeat JV59_37935 61a1f82e8a98ac4b62178b555d09691b 212 SMART SM00671 145 180 22.0 T 14-10-2018 IPR006597 Sel1-like repeat JV59_37935 61a1f82e8a98ac4b62178b555d09691b 212 SMART SM00671 109 144 2.9E-6 T 14-10-2018 IPR006597 Sel1-like repeat JV59_30955 f214453bcc77380581674c0066964a96 357 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 288 308 3.5E-39 T 14-10-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 JV59_30955 f214453bcc77380581674c0066964a96 357 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 187 208 3.5E-39 T 14-10-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 JV59_30955 f214453bcc77380581674c0066964a96 357 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 209 227 3.5E-39 T 14-10-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 JV59_30955 f214453bcc77380581674c0066964a96 357 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 315 338 3.5E-39 T 14-10-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 JV59_30955 f214453bcc77380581674c0066964a96 357 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 236 254 3.5E-39 T 14-10-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 JV59_30955 f214453bcc77380581674c0066964a96 357 SUPERFAMILY SSF51261 202 308 4.97E-15 T 14-10-2018 IPR011055 Duplicated hybrid motif JV59_30955 f214453bcc77380581674c0066964a96 357 Gene3D G3DSA:2.70.70.10 183 357 1.3E-43 T 14-10-2018 IPR011055 Duplicated hybrid motif JV59_30955 f214453bcc77380581674c0066964a96 357 Pfam PF01551 Peptidase family M23 229 308 2.1E-10 T 14-10-2018 IPR016047 Peptidase M23 JV59_16625 b8c30727830777da61ca6376b86367f2 639 SUPERFAMILY SSF51735 419 563 4.82E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_16625 b8c30727830777da61ca6376b86367f2 639 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 303 9.9E-75 T 14-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 JV59_16625 b8c30727830777da61ca6376b86367f2 639 Pfam PF00999 Sodium/hydrogen exchanger family 10 390 1.3E-58 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 JV59_16625 b8c30727830777da61ca6376b86367f2 639 Gene3D G3DSA:3.40.50.720 419 579 7.8E-36 T 14-10-2018 JV59_16625 b8c30727830777da61ca6376b86367f2 639 Pfam PF02254 TrkA-N domain 422 534 9.3E-24 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 JV59_16625 b8c30727830777da61ca6376b86367f2 639 Gene3D G3DSA:1.20.1530.20 2 399 1.5E-78 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily JV59_22675 4015500edad4a2edc0af7d2da483bb22 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 442 1.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_22675 4015500edad4a2edc0af7d2da483bb22 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 1.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_22675 4015500edad4a2edc0af7d2da483bb22 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 461 1.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_22675 4015500edad4a2edc0af7d2da483bb22 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 1.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_22675 4015500edad4a2edc0af7d2da483bb22 470 SMART SM00387 352 464 6.4E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_22675 4015500edad4a2edc0af7d2da483bb22 470 SUPERFAMILY SSF47384 227 300 1.67E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_22675 4015500edad4a2edc0af7d2da483bb22 470 Gene3D G3DSA:1.10.287.130 191 306 2.8E-8 T 14-10-2018 JV59_22675 4015500edad4a2edc0af7d2da483bb22 470 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 461 6.0E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_22675 4015500edad4a2edc0af7d2da483bb22 470 SUPERFAMILY SSF55874 306 460 9.56E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_22675 4015500edad4a2edc0af7d2da483bb22 470 Gene3D G3DSA:3.30.565.10 309 468 1.3E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_01120 084e9f6a9fe66ddb8909b15f43a572d3 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 3.2E-260 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 JV59_01120 084e9f6a9fe66ddb8909b15f43a572d3 610 Gene3D G3DSA:3.40.50.10490 448 595 2.7E-145 T 14-10-2018 JV59_01120 084e9f6a9fe66ddb8909b15f43a572d3 610 Pfam PF01380 SIS domain 290 419 1.2E-32 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 JV59_01120 084e9f6a9fe66ddb8909b15f43a572d3 610 Pfam PF01380 SIS domain 463 592 2.8E-25 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 JV59_01120 084e9f6a9fe66ddb8909b15f43a572d3 610 Gene3D G3DSA:3.60.20.10 2 241 1.2E-81 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JV59_01120 084e9f6a9fe66ddb8909b15f43a572d3 610 Gene3D G3DSA:3.40.50.10490 249 609 2.7E-145 T 14-10-2018 JV59_01120 084e9f6a9fe66ddb8909b15f43a572d3 610 SUPERFAMILY SSF53697 245 610 8.63E-113 T 14-10-2018 JV59_01120 084e9f6a9fe66ddb8909b15f43a572d3 610 SUPERFAMILY SSF56235 2 234 1.46E-75 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JV59_01120 084e9f6a9fe66ddb8909b15f43a572d3 610 Pfam PF13522 Glutamine amidotransferase domain 56 174 5.5E-22 T 14-10-2018 JV59_01120 084e9f6a9fe66ddb8909b15f43a572d3 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.538 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 JV59_22155 0f8c67512cbff1a8eb264beef21533a0 223 SUPERFAMILY SSF52317 1 222 5.58E-57 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_22155 0f8c67512cbff1a8eb264beef21533a0 223 Gene3D G3DSA:3.40.50.880 1 223 5.5E-64 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_22155 0f8c67512cbff1a8eb264beef21533a0 223 Pfam PF01965 DJ-1/PfpI family 25 220 1.4E-13 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 JV59_38840 3a790cdcb4d46be1bbf44bf6c74cba98 158 Gene3D G3DSA:3.10.50.30 77 158 1.5E-31 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 JV59_38840 3a790cdcb4d46be1bbf44bf6c74cba98 158 PIRSF PIRSF006092 1 157 1.8E-46 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 JV59_38840 3a790cdcb4d46be1bbf44bf6c74cba98 158 Gene3D G3DSA:1.10.287.180 1 76 5.6E-32 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 JV59_38840 3a790cdcb4d46be1bbf44bf6c74cba98 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 27.943 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 JV59_38840 3a790cdcb4d46be1bbf44bf6c74cba98 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 JV59_38840 3a790cdcb4d46be1bbf44bf6c74cba98 158 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 157 2.8E-77 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 JV59_38840 3a790cdcb4d46be1bbf44bf6c74cba98 158 SUPERFAMILY SSF46557 3 77 1.96E-27 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 JV59_38840 3a790cdcb4d46be1bbf44bf6c74cba98 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 1.3E-22 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 JV59_38840 3a790cdcb4d46be1bbf44bf6c74cba98 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 JV59_38840 3a790cdcb4d46be1bbf44bf6c74cba98 158 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 53.926 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 JV59_38840 3a790cdcb4d46be1bbf44bf6c74cba98 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 4.8E-26 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 JV59_38840 3a790cdcb4d46be1bbf44bf6c74cba98 158 SUPERFAMILY SSF54534 80 156 3.01E-19 T 14-10-2018 JV59_38730 55293d3e5370b313ca71a789042e0603 456 Pfam PF00860 Permease family 32 410 9.6E-19 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 JV59_32935 7b1fe0c6b1a85c6f1a64ddaa9910f5e3 218 SMART SM00849 14 195 1.3E-36 T 14-10-2018 IPR001279 Metallo-beta-lactamase JV59_32935 7b1fe0c6b1a85c6f1a64ddaa9910f5e3 218 Pfam PF00753 Metallo-beta-lactamase superfamily 14 195 2.6E-28 T 14-10-2018 IPR001279 Metallo-beta-lactamase JV59_32935 7b1fe0c6b1a85c6f1a64ddaa9910f5e3 218 Gene3D G3DSA:3.60.15.10 3 213 1.0E-75 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JV59_32935 7b1fe0c6b1a85c6f1a64ddaa9910f5e3 218 SUPERFAMILY SSF56281 5 211 6.77E-55 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JV59_29100 2def3ed812c4da2f1f86dbe5dd433c45 380 PIRSF PIRSF029172 1 380 2.7E-172 T 14-10-2018 IPR027020 Protein ynjB JV59_29100 2def3ed812c4da2f1f86dbe5dd433c45 380 Pfam PF13416 Bacterial extracellular solute-binding protein 55 342 1.3E-23 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein JV59_29100 2def3ed812c4da2f1f86dbe5dd433c45 380 Gene3D G3DSA:3.40.190.10 68 331 1.4E-16 T 14-10-2018 JV59_29100 2def3ed812c4da2f1f86dbe5dd433c45 380 Gene3D G3DSA:3.40.190.10 152 296 1.4E-16 T 14-10-2018 JV59_29100 2def3ed812c4da2f1f86dbe5dd433c45 380 SUPERFAMILY SSF53850 32 378 9.32E-40 T 14-10-2018 JV59_32965 1b366f5a7678a1b07712e0239cc47617 420 Gene3D G3DSA:1.20.1420.20 18 403 6.0E-85 T 14-10-2018 IPR038352 Imelysin-like domain superfamily JV59_32965 1b366f5a7678a1b07712e0239cc47617 420 Pfam PF09375 Imelysin 40 399 4.5E-96 T 14-10-2018 IPR018976 Imelysin-like domain JV59_20670 8fb4db289acbf31e789b9102ce3504e0 326 SUPERFAMILY SSF52821 94 239 3.29E-32 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JV59_20670 8fb4db289acbf31e789b9102ce3504e0 326 Pfam PF00581 Rhodanese-like domain 115 210 3.0E-8 T 14-10-2018 IPR001763 Rhodanese-like domain JV59_20670 8fb4db289acbf31e789b9102ce3504e0 326 Gene3D G3DSA:3.30.70.100 1 96 8.1E-34 T 14-10-2018 JV59_20670 8fb4db289acbf31e789b9102ce3504e0 326 Gene3D G3DSA:3.40.250.10 97 253 5.0E-52 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily JV59_20670 8fb4db289acbf31e789b9102ce3504e0 326 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 254 45.47 T 14-10-2018 IPR020936 Uncharacterised protein family UPF0176 JV59_20670 8fb4db289acbf31e789b9102ce3504e0 326 SMART SM00450 113 214 2.4E-22 T 14-10-2018 IPR001763 Rhodanese-like domain JV59_31830 6ebd2bd3b6287e2a7b89f828ea3cf73e 269 Gene3D G3DSA:3.30.1240.10 86 191 8.4E-81 T 14-10-2018 JV59_31830 6ebd2bd3b6287e2a7b89f828ea3cf73e 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 14-10-2018 JV59_31830 6ebd2bd3b6287e2a7b89f828ea3cf73e 269 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 14-10-2018 JV59_31830 6ebd2bd3b6287e2a7b89f828ea3cf73e 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 9.5E-67 T 14-10-2018 JV59_31830 6ebd2bd3b6287e2a7b89f828ea3cf73e 269 Gene3D G3DSA:3.40.50.1000 3 263 8.4E-81 T 14-10-2018 IPR023214 HAD superfamily JV59_31830 6ebd2bd3b6287e2a7b89f828ea3cf73e 269 SUPERFAMILY SSF56784 1 267 9.63E-75 T 14-10-2018 IPR036412 HAD-like superfamily JV59_31830 6ebd2bd3b6287e2a7b89f828ea3cf73e 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 235 1.1E-25 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 JV59_31830 6ebd2bd3b6287e2a7b89f828ea3cf73e 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 262 6.1E-62 T 14-10-2018 IPR000150 Cof family GO:0016787 JV59_26230 e361f762be5e96a89f929fcebc647bdf 337 Gene3D G3DSA:3.40.190.80 200 337 7.2E-61 T 14-10-2018 JV59_26230 e361f762be5e96a89f929fcebc647bdf 337 PIRSF PIRSF500210 1 336 8.3E-131 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 JV59_26230 e361f762be5e96a89f929fcebc647bdf 337 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 9.8E-76 T 14-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 JV59_26230 e361f762be5e96a89f929fcebc647bdf 337 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 14-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 JV59_26230 e361f762be5e96a89f929fcebc647bdf 337 Gene3D G3DSA:3.30.540.10 4 198 9.5E-77 T 14-10-2018 JV59_26230 e361f762be5e96a89f929fcebc647bdf 337 SUPERFAMILY SSF56655 3 331 3.95E-114 T 14-10-2018 JV59_26230 e361f762be5e96a89f929fcebc647bdf 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 2.2E-76 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 JV59_26230 e361f762be5e96a89f929fcebc647bdf 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 2.2E-76 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 JV59_26230 e361f762be5e96a89f929fcebc647bdf 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 2.2E-76 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 JV59_26230 e361f762be5e96a89f929fcebc647bdf 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 2.2E-76 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 JV59_26230 e361f762be5e96a89f929fcebc647bdf 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 2.2E-76 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 JV59_26230 e361f762be5e96a89f929fcebc647bdf 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 2.2E-76 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 JV59_26230 e361f762be5e96a89f929fcebc647bdf 337 PIRSF PIRSF000904 1 336 8.5E-128 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 JV59_26230 e361f762be5e96a89f929fcebc647bdf 337 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 43.049 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 JV59_23895 a4a2db91e0904befdf3e2d69690f55aa 518 Gene3D G3DSA:1.10.3720.10 309 419 2.2E-8 T 14-10-2018 IPR035906 MetI-like superfamily JV59_23895 a4a2db91e0904befdf3e2d69690f55aa 518 SUPERFAMILY SSF53850 1 251 1.61E-41 T 14-10-2018 JV59_23895 a4a2db91e0904befdf3e2d69690f55aa 518 Gene3D G3DSA:3.40.190.10 120 211 2.7E-41 T 14-10-2018 JV59_23895 a4a2db91e0904befdf3e2d69690f55aa 518 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 250 1.9E-33 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_23895 a4a2db91e0904befdf3e2d69690f55aa 518 Gene3D G3DSA:3.40.190.10 27 246 2.7E-41 T 14-10-2018 JV59_23895 a4a2db91e0904befdf3e2d69690f55aa 518 SMART SM00062 32 254 8.6E-23 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_22375 e29bb22857b27442a01eead9c0274a41 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 5.2E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_22375 e29bb22857b27442a01eead9c0274a41 296 SUPERFAMILY SSF53850 89 286 5.07E-28 T 14-10-2018 JV59_22375 e29bb22857b27442a01eead9c0274a41 296 Gene3D G3DSA:1.10.10.10 1 87 6.5E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_22375 e29bb22857b27442a01eead9c0274a41 296 Gene3D G3DSA:3.40.190.290 90 283 1.1E-30 T 14-10-2018 JV59_22375 e29bb22857b27442a01eead9c0274a41 296 Pfam PF03466 LysR substrate binding domain 89 282 7.7E-24 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_22375 e29bb22857b27442a01eead9c0274a41 296 SUPERFAMILY SSF46785 1 110 2.02E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_21885 a1e33fc125b6674cc55d9e1ec3b33f7d 583 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 321 1.4E-19 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain JV59_21885 a1e33fc125b6674cc55d9e1ec3b33f7d 583 Gene3D G3DSA:3.40.190.10 122 354 4.2E-29 T 14-10-2018 JV59_21885 a1e33fc125b6674cc55d9e1ec3b33f7d 583 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 119 1.2E-31 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain JV59_21885 a1e33fc125b6674cc55d9e1ec3b33f7d 583 SUPERFAMILY SSF53850 117 581 4.16E-60 T 14-10-2018 JV59_18570 17faf5a43cb714bda104130948093186 318 SUPERFAMILY SSF47648 8 71 1.31E-14 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 JV59_18570 17faf5a43cb714bda104130948093186 318 SUPERFAMILY SSF52418 75 312 3.34E-41 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 JV59_18570 17faf5a43cb714bda104130948093186 318 Gene3D G3DSA:1.20.970.10 2 71 2.5E-16 T 14-10-2018 JV59_18570 17faf5a43cb714bda104130948093186 318 Pfam PF02885 Glycosyl transferase family, helical bundle domain 8 67 6.4E-12 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 JV59_18570 17faf5a43cb714bda104130948093186 318 Gene3D G3DSA:3.40.1030.10 72 315 1.8E-38 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 JV59_31650 7d6781d9a9fb2a06a2b4c4bfa359c037 66 SUPERFAMILY SSF52833 9 62 1.3E-5 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_31650 7d6781d9a9fb2a06a2b4c4bfa359c037 66 Pfam PF05768 Glutaredoxin-like domain (DUF836) 9 57 1.4E-9 T 14-10-2018 IPR008554 Glutaredoxin-like JV59_31650 7d6781d9a9fb2a06a2b4c4bfa359c037 66 Gene3D G3DSA:3.40.30.10 1 65 3.1E-11 T 14-10-2018 JV59_21300 ab8a7316c3d5ec90cc5c24a426a9cd72 158 Pfam PF03061 Thioesterase superfamily 56 139 3.1E-4 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 JV59_21300 ab8a7316c3d5ec90cc5c24a426a9cd72 158 Gene3D G3DSA:3.10.129.10 2 154 7.4E-35 T 14-10-2018 JV59_21300 ab8a7316c3d5ec90cc5c24a426a9cd72 158 SUPERFAMILY SSF54637 11 148 2.29E-27 T 14-10-2018 IPR029069 HotDog domain superfamily JV59_35510 400ea774264c40e03f48bd84d5bf7bd4 114 SUPERFAMILY SSF81343 4 113 9.48E-25 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_35510 400ea774264c40e03f48bd84d5bf7bd4 114 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 10 102 4.9E-6 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_35510 400ea774264c40e03f48bd84d5bf7bd4 114 PIRSF PIRSF000169 1 114 1.0E-36 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 JV59_35510 400ea774264c40e03f48bd84d5bf7bd4 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 3.3E-34 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 JV59_35510 400ea774264c40e03f48bd84d5bf7bd4 114 Gene3D G3DSA:1.20.1300.10 1 114 1.5E-27 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JV59_21995 5021a2ce0f9ade51a4d05ac5fb934f42 255 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_21995 5021a2ce0f9ade51a4d05ac5fb934f42 255 Pfam PF00005 ABC transporter 17 166 1.7E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_21995 5021a2ce0f9ade51a4d05ac5fb934f42 255 SMART SM00382 26 214 4.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_21995 5021a2ce0f9ade51a4d05ac5fb934f42 255 Gene3D G3DSA:3.40.50.300 1 253 9.2E-66 T 14-10-2018 JV59_21995 5021a2ce0f9ade51a4d05ac5fb934f42 255 SUPERFAMILY SSF52540 6 230 1.06E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_39190 8800fbcecd05877d1f7ecae466167a94 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 14-10-2018 IPR001455 TusA-like domain JV59_39190 8800fbcecd05877d1f7ecae466167a94 82 SUPERFAMILY SSF64307 5 80 1.7E-25 T 14-10-2018 IPR036868 TusA-like domain superfamily JV59_39190 8800fbcecd05877d1f7ecae466167a94 82 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 28.67 T 14-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 JV59_39190 8800fbcecd05877d1f7ecae466167a94 82 Gene3D G3DSA:3.30.110.40 2 80 6.8E-29 T 14-10-2018 IPR036868 TusA-like domain superfamily JV59_39190 8800fbcecd05877d1f7ecae466167a94 82 Pfam PF01206 Sulfurtransferase TusA 11 79 4.7E-23 T 14-10-2018 IPR001455 TusA-like domain JV59_28970 8cced8efd7f3bb6a6e7006f1f76df8a4 301 SUPERFAMILY SSF64182 1 298 1.23E-66 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily JV59_28970 8cced8efd7f3bb6a6e7006f1f76df8a4 301 Gene3D G3DSA:3.10.310.20 187 301 2.6E-22 T 14-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 JV59_28970 8cced8efd7f3bb6a6e7006f1f76df8a4 301 Pfam PF02833 DHHA2 domain 180 297 3.0E-15 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 JV59_28970 8cced8efd7f3bb6a6e7006f1f76df8a4 301 Pfam PF01368 DHH family 2 142 3.6E-22 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 JV59_28970 8cced8efd7f3bb6a6e7006f1f76df8a4 301 Gene3D G3DSA:3.90.1640.10 1 186 4.5E-64 T 14-10-2018 JV59_28970 8cced8efd7f3bb6a6e7006f1f76df8a4 301 SMART SM01131 178 300 3.1E-33 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 JV59_17650 e328515962a8ad00295dd37a126ec919 328 Pfam PF00248 Aldo/keto reductase family 16 308 7.9E-76 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain JV59_17650 e328515962a8ad00295dd37a126ec919 328 Gene3D G3DSA:3.20.20.100 2 326 2.6E-116 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily JV59_17650 e328515962a8ad00295dd37a126ec919 328 SUPERFAMILY SSF51430 2 310 9.82E-97 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily JV59_38660 237c3f5a93784ab13296fc1218c1631f 78 Pfam PF00830 Ribosomal L28 family 3 62 2.6E-26 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_38660 237c3f5a93784ab13296fc1218c1631f 78 SUPERFAMILY SSF143800 2 76 3.14E-30 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_38660 237c3f5a93784ab13296fc1218c1631f 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.453 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_38660 237c3f5a93784ab13296fc1218c1631f 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 8.7E-28 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_38660 237c3f5a93784ab13296fc1218c1631f 78 Gene3D G3DSA:2.30.170.40 2 78 9.7E-33 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_29970 063c89ea64fccc6b6b4e07a4062335fe 143 Gene3D G3DSA:3.40.630.30 1 143 3.2E-30 T 14-10-2018 JV59_29970 063c89ea64fccc6b6b4e07a4062335fe 143 Pfam PF13673 Acetyltransferase (GNAT) domain 54 127 3.6E-16 T 14-10-2018 IPR000182 GNAT domain JV59_29970 063c89ea64fccc6b6b4e07a4062335fe 143 SUPERFAMILY SSF55729 3 142 7.62E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_39120 f64038dacfa66f173dad4ce89cdb4772 472 Gene3D G3DSA:3.30.70.20 221 292 3.4E-5 T 14-10-2018 JV59_39120 f64038dacfa66f173dad4ce89cdb4772 472 SUPERFAMILY SSF54862 107 338 4.55E-32 T 14-10-2018 JV59_39120 f64038dacfa66f173dad4ce89cdb4772 472 Gene3D G3DSA:2.60.40.10 357 472 1.1E-43 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_39120 f64038dacfa66f173dad4ce89cdb4772 472 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 43 470 1.4E-169 T 14-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 JV59_39120 f64038dacfa66f173dad4ce89cdb4772 472 Pfam PF13746 4Fe-4S dicluster domain 222 326 1.7E-41 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JV59_39120 f64038dacfa66f173dad4ce89cdb4772 472 Pfam PF12801 4Fe-4S binding domain 97 136 1.1E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JV59_39120 f64038dacfa66f173dad4ce89cdb4772 472 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 274 285 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JV59_39120 f64038dacfa66f173dad4ce89cdb4772 472 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 358 469 8.5E-29 T 14-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain JV59_23505 06b64b2e4ea5b438d8847aee4061a29d 288 SUPERFAMILY SSF46785 3 112 7.08E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_23505 06b64b2e4ea5b438d8847aee4061a29d 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.9E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_23505 06b64b2e4ea5b438d8847aee4061a29d 288 SUPERFAMILY SSF53850 89 284 1.21E-20 T 14-10-2018 JV59_23505 06b64b2e4ea5b438d8847aee4061a29d 288 Pfam PF03466 LysR substrate binding domain 88 281 1.1E-16 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_23505 06b64b2e4ea5b438d8847aee4061a29d 288 Gene3D G3DSA:1.10.10.10 3 89 5.2E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_23505 06b64b2e4ea5b438d8847aee4061a29d 288 Gene3D G3DSA:3.40.190.290 91 281 8.5E-28 T 14-10-2018 JV59_27145 abccd3f5f68251a392af696893ecabf2 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 6.8E-142 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 JV59_27145 abccd3f5f68251a392af696893ecabf2 322 Gene3D G3DSA:3.40.50.1100 43 145 6.0E-126 T 14-10-2018 JV59_27145 abccd3f5f68251a392af696893ecabf2 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 4.1E-135 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 JV59_27145 abccd3f5f68251a392af696893ecabf2 322 Gene3D G3DSA:3.40.50.1100 12 306 6.0E-126 T 14-10-2018 JV59_27145 abccd3f5f68251a392af696893ecabf2 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 1.0E-67 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme JV59_27145 abccd3f5f68251a392af696893ecabf2 322 SUPERFAMILY SSF53686 4 309 1.83E-96 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JV59_27145 abccd3f5f68251a392af696893ecabf2 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 JV59_19900 04c0200372558f476c190ae45f232d54 591 SUPERFAMILY SSF141868 343 586 2.09E-70 T 14-10-2018 IPR035919 EAL domain superfamily JV59_19900 04c0200372558f476c190ae45f232d54 591 Pfam PF00563 EAL domain 344 579 1.4E-58 T 14-10-2018 IPR001633 EAL domain JV59_19900 04c0200372558f476c190ae45f232d54 591 SMART SM00052 338 584 3.3E-71 T 14-10-2018 IPR001633 EAL domain JV59_19900 04c0200372558f476c190ae45f232d54 591 SMART SM00086 119 159 0.003 T 14-10-2018 IPR001610 PAC motif JV59_19900 04c0200372558f476c190ae45f232d54 591 Pfam PF00990 Diguanylate cyclase, GGDEF domain 171 323 1.8E-7 T 14-10-2018 IPR000160 GGDEF domain JV59_19900 04c0200372558f476c190ae45f232d54 591 SUPERFAMILY SSF55073 177 330 8.63E-14 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_19900 04c0200372558f476c190ae45f232d54 591 Gene3D G3DSA:3.20.20.450 337 589 7.9E-75 T 14-10-2018 IPR035919 EAL domain superfamily JV59_19900 04c0200372558f476c190ae45f232d54 591 Gene3D G3DSA:3.30.450.20 44 155 4.2E-14 T 14-10-2018 JV59_19900 04c0200372558f476c190ae45f232d54 591 SMART SM00267 159 328 9.2E-5 T 14-10-2018 IPR000160 GGDEF domain JV59_19900 04c0200372558f476c190ae45f232d54 591 Pfam PF08447 PAS fold 70 140 5.4E-11 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 JV59_19900 04c0200372558f476c190ae45f232d54 591 Gene3D G3DSA:3.30.70.270 169 333 5.2E-13 T 14-10-2018 JV59_19900 04c0200372558f476c190ae45f232d54 591 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 46 163 1.2E-8 T 14-10-2018 IPR000014 PAS domain JV59_19900 04c0200372558f476c190ae45f232d54 591 SUPERFAMILY SSF55785 51 161 2.27E-15 T 14-10-2018 IPR035965 PAS domain superfamily JV59_22700 0c2f439b8d3aba32cf87d6dda18c385f 251 SMART SM00849 15 195 4.4E-16 T 14-10-2018 IPR001279 Metallo-beta-lactamase JV59_22700 0c2f439b8d3aba32cf87d6dda18c385f 251 SUPERFAMILY SSF56281 12 203 4.6E-34 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JV59_22700 0c2f439b8d3aba32cf87d6dda18c385f 251 Pfam PF00753 Metallo-beta-lactamase superfamily 13 173 8.4E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase JV59_22700 0c2f439b8d3aba32cf87d6dda18c385f 251 Gene3D G3DSA:3.60.15.10 2 250 1.3E-55 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JV59_33810 79e5928bf9747e747effe5b2fca40eb2 250 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.677 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 JV59_33810 79e5928bf9747e747effe5b2fca40eb2 250 SUPERFAMILY SSF53448 1 248 1.13E-62 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_33810 79e5928bf9747e747effe5b2fca40eb2 250 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 4.8E-115 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 JV59_33810 79e5928bf9747e747effe5b2fca40eb2 250 Pfam PF02348 Cytidylyltransferase 5 221 3.4E-66 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 JV59_33810 79e5928bf9747e747effe5b2fca40eb2 250 Gene3D G3DSA:3.90.550.10 1 250 3.9E-93 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_18405 43ec911c43c44c3e940b61097b38f836 270 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 265 5.6E-48 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JV59_18405 43ec911c43c44c3e940b61097b38f836 270 Gene3D G3DSA:1.10.12.10 209 269 1.5E-23 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal JV59_18405 43ec911c43c44c3e940b61097b38f836 270 SUPERFAMILY SSF52096 6 264 2.05E-71 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JV59_18405 43ec911c43c44c3e940b61097b38f836 270 Gene3D G3DSA:3.90.226.10 8 207 5.7E-61 T 14-10-2018 JV59_20380 62972fa73a9b80bf06ca937803bbc62e 279 Gene3D G3DSA:3.40.50.1820 3 278 7.3E-94 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_20380 62972fa73a9b80bf06ca937803bbc62e 279 Pfam PF00756 Putative esterase 23 270 3.9E-61 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 JV59_20380 62972fa73a9b80bf06ca937803bbc62e 279 SUPERFAMILY SSF53474 4 276 1.12E-85 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_20380 62972fa73a9b80bf06ca937803bbc62e 279 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 276 1.7E-117 T 14-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 JV59_18280 94272e79d757d009bfaafa250a58701d 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 75 94 3.4E-22 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 JV59_18280 94272e79d757d009bfaafa250a58701d 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 24 40 3.4E-22 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 JV59_18280 94272e79d757d009bfaafa250a58701d 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 205 215 3.4E-22 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 JV59_18280 94272e79d757d009bfaafa250a58701d 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 153 174 3.4E-22 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 JV59_18280 94272e79d757d009bfaafa250a58701d 341 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 11 338 1.8E-68 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 JV59_18280 94272e79d757d009bfaafa250a58701d 341 SUPERFAMILY SSF52374 14 338 2.72E-75 T 14-10-2018 JV59_18280 94272e79d757d009bfaafa250a58701d 341 Pfam PF00579 tRNA synthetases class I (W and Y) 13 293 9.4E-52 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_18280 94272e79d757d009bfaafa250a58701d 341 Gene3D G3DSA:3.40.50.620 14 333 2.0E-98 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_18280 94272e79d757d009bfaafa250a58701d 341 Gene3D G3DSA:1.10.240.10 192 306 2.0E-98 T 14-10-2018 JV59_23205 4e252056401b220164d39e3426cb7de6 99 SUPERFAMILY SSF52091 7 98 6.08E-18 T 14-10-2018 IPR036513 STAS domain superfamily JV59_23205 4e252056401b220164d39e3426cb7de6 99 Gene3D G3DSA:3.30.750.24 2 99 9.6E-17 T 14-10-2018 IPR036513 STAS domain superfamily JV59_23205 4e252056401b220164d39e3426cb7de6 99 Pfam PF01740 STAS domain 24 96 3.3E-9 T 14-10-2018 IPR002645 STAS domain JV59_36810 e780958136d1af5cf7b8a336bb2447fc 161 Pfam PF03737 Aldolase/RraA 5 152 4.9E-42 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein JV59_36810 e780958136d1af5cf7b8a336bb2447fc 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 153 3.7E-68 T 14-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 JV59_36810 e780958136d1af5cf7b8a336bb2447fc 161 SUPERFAMILY SSF89562 1 154 1.12E-47 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily JV59_36810 e780958136d1af5cf7b8a336bb2447fc 161 Gene3D G3DSA:3.50.30.40 1 160 4.6E-63 T 14-10-2018 JV59_34570 585d5b1a83da0ac56b6a2c820210138d 233 Gene3D G3DSA:3.30.420.40 5 201 1.1E-82 T 14-10-2018 JV59_34570 585d5b1a83da0ac56b6a2c820210138d 233 Gene3D G3DSA:3.30.420.40 96 190 1.1E-82 T 14-10-2018 JV59_34570 585d5b1a83da0ac56b6a2c820210138d 233 SUPERFAMILY SSF53067 111 219 8.93E-28 T 14-10-2018 JV59_34570 585d5b1a83da0ac56b6a2c820210138d 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 4.4E-68 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 JV59_34570 585d5b1a83da0ac56b6a2c820210138d 233 SUPERFAMILY SSF53067 4 106 2.03E-32 T 14-10-2018 JV59_34570 585d5b1a83da0ac56b6a2c820210138d 233 Pfam PF00814 Glycoprotease family 30 175 2.1E-31 T 14-10-2018 IPR000905 Gcp-like domain JV59_38360 40dad70d056b260ecbee2158c0bce4f8 733 Gene3D G3DSA:3.40.50.300 185 379 3.4E-77 T 14-10-2018 JV59_38360 40dad70d056b260ecbee2158c0bce4f8 733 Gene3D G3DSA:1.10.8.630 4 113 2.0E-34 T 14-10-2018 JV59_38360 40dad70d056b260ecbee2158c0bce4f8 733 TIGRFAM TIGR00595 priA: primosomal protein N' 221 729 1.5E-192 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 JV59_38360 40dad70d056b260ecbee2158c0bce4f8 733 Pfam PF00271 Helicase conserved C-terminal domain 513 588 4.9E-7 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_38360 40dad70d056b260ecbee2158c0bce4f8 733 Pfam PF00270 DEAD/DEAH box helicase 205 364 8.6E-15 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JV59_38360 40dad70d056b260ecbee2158c0bce4f8 733 SMART SM00490 492 589 1.3E-11 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_38360 40dad70d056b260ecbee2158c0bce4f8 733 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 732 25.029 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 JV59_38360 40dad70d056b260ecbee2158c0bce4f8 733 SMART SM00487 196 395 6.2E-19 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JV59_38360 40dad70d056b260ecbee2158c0bce4f8 733 SUPERFAMILY SSF52540 71 380 9.01E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_38360 40dad70d056b260ecbee2158c0bce4f8 733 SUPERFAMILY SSF52540 461 614 1.06E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_33470 40aed7af3258a21e1ec7969b65dd67f6 342 Gene3D G3DSA:1.10.10.60 239 342 7.1E-22 T 14-10-2018 JV59_33470 40aed7af3258a21e1ec7969b65dd67f6 342 SUPERFAMILY SSF46689 293 340 7.17E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_33470 40aed7af3258a21e1ec7969b65dd67f6 342 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 32 214 1.8E-34 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal JV59_33470 40aed7af3258a21e1ec7969b65dd67f6 342 Pfam PF12833 Helix-turn-helix domain 265 340 1.0E-15 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_33470 40aed7af3258a21e1ec7969b65dd67f6 342 SMART SM00342 258 340 1.7E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_38250 0b02554d205f87235e535218bd40dd61 179 Pfam PF03551 Transcriptional regulator PadR-like family 7 80 5.6E-15 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal JV59_38250 0b02554d205f87235e535218bd40dd61 179 Gene3D G3DSA:1.10.10.10 1 89 4.4E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_38250 0b02554d205f87235e535218bd40dd61 179 Pfam PF10400 Virulence activator alpha C-term 92 175 3.0E-16 T 14-10-2018 IPR018309 Transcription regulator PadR, C-terminal JV59_38250 0b02554d205f87235e535218bd40dd61 179 SUPERFAMILY SSF46785 3 176 1.44E-44 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_35330 cc57a40a7de8744f7bbea397ac0892bc 179 SMART SM00028 126 159 45.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_35330 cc57a40a7de8744f7bbea397ac0892bc 179 SMART SM00028 54 87 0.0012 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_35330 cc57a40a7de8744f7bbea397ac0892bc 179 Gene3D G3DSA:1.25.40.10 89 176 1.3E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_35330 cc57a40a7de8744f7bbea397ac0892bc 179 Gene3D G3DSA:1.25.40.10 20 88 1.1E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_35330 cc57a40a7de8744f7bbea397ac0892bc 179 SUPERFAMILY SSF48452 44 161 3.21E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_35330 cc57a40a7de8744f7bbea397ac0892bc 179 Pfam PF07719 Tetratricopeptide repeat 54 86 5.6E-6 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 JV59_21305 61c34e0841f4f41582938fd4982c8d02 214 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 206 214 - T 14-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 JV59_21305 61c34e0841f4f41582938fd4982c8d02 214 Pfam PF03922 OmpW family 23 214 1.2E-66 T 14-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 JV59_21305 61c34e0841f4f41582938fd4982c8d02 214 Gene3D G3DSA:2.40.160.20 22 214 6.1E-77 T 14-10-2018 JV59_21305 61c34e0841f4f41582938fd4982c8d02 214 SUPERFAMILY SSF56925 23 214 1.88E-32 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JV59_26890 cf6bf1f02fdbbe862007ccb88a69ce17 251 SUPERFAMILY SSF64005 6 233 1.44E-88 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 JV59_26890 cf6bf1f02fdbbe862007ccb88a69ce17 251 Gene3D G3DSA:3.40.1180.10 1 239 2.0E-95 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 JV59_26890 cf6bf1f02fdbbe862007ccb88a69ce17 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 4.2E-96 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 JV59_26890 cf6bf1f02fdbbe862007ccb88a69ce17 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.671 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 JV59_26890 cf6bf1f02fdbbe862007ccb88a69ce17 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 4.2E-81 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 JV59_26890 cf6bf1f02fdbbe862007ccb88a69ce17 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 JV59_22225 e72c44c4f95c274772520cbd986f2212 535 SUPERFAMILY SSF56801 22 524 2.49E-121 T 14-10-2018 JV59_22225 e72c44c4f95c274772520cbd986f2212 535 Gene3D G3DSA:3.40.50.12780 5 429 2.5E-107 T 14-10-2018 JV59_22225 e72c44c4f95c274772520cbd986f2212 535 Pfam PF13193 AMP-binding enzyme C-terminal domain 443 518 9.1E-14 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JV59_22225 e72c44c4f95c274772520cbd986f2212 535 Gene3D G3DSA:3.30.300.310 430 527 9.2E-26 T 14-10-2018 JV59_22225 e72c44c4f95c274772520cbd986f2212 535 Pfam PF00501 AMP-binding enzyme 38 434 5.1E-76 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JV59_36755 ac8e6391076f9f1e670ae36aca2937d3 305 SMART SM00028 66 99 0.063 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_36755 ac8e6391076f9f1e670ae36aca2937d3 305 SMART SM00028 100 133 0.0067 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_36755 ac8e6391076f9f1e670ae36aca2937d3 305 SMART SM00028 134 167 220.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_36755 ac8e6391076f9f1e670ae36aca2937d3 305 SMART SM00028 237 270 5.8 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_36755 ac8e6391076f9f1e670ae36aca2937d3 305 Pfam PF13181 Tetratricopeptide repeat 66 98 0.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_36755 ac8e6391076f9f1e670ae36aca2937d3 305 Pfam PF13181 Tetratricopeptide repeat 238 266 0.057 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_36755 ac8e6391076f9f1e670ae36aca2937d3 305 PIRSF PIRSF004654 1 296 2.6E-87 T 14-10-2018 IPR023605 Lipoprotein NlpI JV59_36755 ac8e6391076f9f1e670ae36aca2937d3 305 Gene3D G3DSA:1.25.40.10 27 299 2.8E-81 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_36755 ac8e6391076f9f1e670ae36aca2937d3 305 SUPERFAMILY SSF48452 34 285 1.05E-66 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_19445 7b9ab3b09fa75a3409f5909fe91d6fb8 219 SUPERFAMILY SSF46785 90 174 8.43E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_19445 7b9ab3b09fa75a3409f5909fe91d6fb8 219 Gene3D G3DSA:1.10.10.10 95 175 1.6E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_19445 7b9ab3b09fa75a3409f5909fe91d6fb8 219 Pfam PF04337 Protein of unknown function, DUF480 5 158 3.8E-64 T 14-10-2018 IPR007432 Protein of unknown function DUF480 JV59_19445 7b9ab3b09fa75a3409f5909fe91d6fb8 219 Gene3D G3DSA:1.10.10.10 1 90 3.9E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_19445 7b9ab3b09fa75a3409f5909fe91d6fb8 219 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 219 35.006 T 14-10-2018 IPR007432 Protein of unknown function DUF480 JV59_19445 7b9ab3b09fa75a3409f5909fe91d6fb8 219 SUPERFAMILY SSF46785 3 84 1.5E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_29425 107991a4a0883c007594f35e339f2791 335 Gene3D G3DSA:3.40.50.2300 156 326 1.3E-87 T 14-10-2018 JV59_29425 107991a4a0883c007594f35e339f2791 335 SUPERFAMILY SSF53822 52 329 1.57E-76 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_29425 107991a4a0883c007594f35e339f2791 335 Pfam PF13407 Periplasmic binding protein domain 53 308 9.8E-57 T 14-10-2018 IPR025997 Periplasmic binding protein JV59_29425 107991a4a0883c007594f35e339f2791 335 Gene3D G3DSA:3.40.50.2300 52 319 1.3E-87 T 14-10-2018 JV59_00395 a0bf8f57d50b9be007380a53766e0fe4 325 TIGRFAM TIGR01932 hflC: HflC protein 1 317 1.4E-132 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 JV59_00395 a0bf8f57d50b9be007380a53766e0fe4 325 Pfam PF01145 SPFH domain / Band 7 family 22 232 2.4E-29 T 14-10-2018 IPR001107 Band 7 domain JV59_00395 a0bf8f57d50b9be007380a53766e0fe4 325 PIRSF PIRSF005651 1 325 1.1E-93 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 JV59_00395 a0bf8f57d50b9be007380a53766e0fe4 325 SMART SM00244 18 217 5.2E-45 T 14-10-2018 IPR001107 Band 7 domain JV59_00395 a0bf8f57d50b9be007380a53766e0fe4 325 SUPERFAMILY SSF117892 55 222 1.29E-22 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily JV59_00395 a0bf8f57d50b9be007380a53766e0fe4 325 Gene3D G3DSA:3.30.479.30 52 160 6.1E-9 T 14-10-2018 JV59_33750 e8beb5d06d2c3fefcdbe26cc7e03f683 225 Gene3D G3DSA:1.10.3720.10 1 218 2.2E-48 T 14-10-2018 IPR035906 MetI-like superfamily JV59_33750 e8beb5d06d2c3fefcdbe26cc7e03f683 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 49 217 3.8E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_33750 e8beb5d06d2c3fefcdbe26cc7e03f683 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 112 1.1E-22 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 JV59_33750 e8beb5d06d2c3fefcdbe26cc7e03f683 225 SUPERFAMILY SSF161098 11 203 3.79E-40 T 14-10-2018 IPR035906 MetI-like superfamily JV59_39315 03b8d0b280b0623bb5ae762c7c87ae83 84 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.772 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39315 03b8d0b280b0623bb5ae762c7c87ae83 84 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39315 03b8d0b280b0623bb5ae762c7c87ae83 84 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 76 1.2E-30 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 JV59_39315 03b8d0b280b0623bb5ae762c7c87ae83 84 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.4E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39315 03b8d0b280b0623bb5ae762c7c87ae83 84 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.4E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39315 03b8d0b280b0623bb5ae762c7c87ae83 84 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.4E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39315 03b8d0b280b0623bb5ae762c7c87ae83 84 Gene3D G3DSA:1.20.20.10 1 77 1.8E-27 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39315 03b8d0b280b0623bb5ae762c7c87ae83 84 Pfam PF00137 ATP synthase subunit C 10 72 4.5E-11 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 JV59_39315 03b8d0b280b0623bb5ae762c7c87ae83 84 SUPERFAMILY SSF81333 3 78 1.09E-19 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily JV59_29525 2e6e0f767b8c01e13220da50626cbf6b 414 Pfam PF07690 Major Facilitator Superfamily 24 357 1.0E-29 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_29525 2e6e0f767b8c01e13220da50626cbf6b 414 Gene3D G3DSA:1.20.1250.20 6 214 2.9E-22 T 14-10-2018 JV59_29525 2e6e0f767b8c01e13220da50626cbf6b 414 Gene3D G3DSA:1.20.1250.20 215 412 3.0E-14 T 14-10-2018 JV59_29525 2e6e0f767b8c01e13220da50626cbf6b 414 SUPERFAMILY SSF103473 18 405 3.92E-45 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_33820 305179b6517d99ed3f9c1c5ee7f4e1a6 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 324 40.108 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 JV59_33820 305179b6517d99ed3f9c1c5ee7f4e1a6 335 SUPERFAMILY SSF52540 50 160 4.18E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_33820 305179b6517d99ed3f9c1c5ee7f4e1a6 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 323 2.6E-109 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 JV59_33820 305179b6517d99ed3f9c1c5ee7f4e1a6 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 23 325 1.5E-97 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 JV59_30345 a2eeeb1a3b69a5e2098f541455ce3723 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.073 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JV59_30345 a2eeeb1a3b69a5e2098f541455ce3723 367 Gene3D G3DSA:3.30.470.20 129 284 1.0E-36 T 14-10-2018 JV59_30345 a2eeeb1a3b69a5e2098f541455ce3723 367 Pfam PF01259 SAICAR synthetase 22 293 2.2E-46 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JV59_30345 a2eeeb1a3b69a5e2098f541455ce3723 367 SUPERFAMILY SSF56104 14 343 1.44E-66 T 14-10-2018 JV59_30345 a2eeeb1a3b69a5e2098f541455ce3723 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 2.0E-214 T 14-10-2018 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 JV59_30345 a2eeeb1a3b69a5e2098f541455ce3723 367 Gene3D G3DSA:3.30.200.20 12 128 2.6E-24 T 14-10-2018 JV59_36520 ee617ed1aa6a3bc006052a5b8ea77308 241 Gene3D G3DSA:1.25.40.10 28 241 8.6E-57 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_36520 ee617ed1aa6a3bc006052a5b8ea77308 241 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 240 38.193 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD JV59_36520 ee617ed1aa6a3bc006052a5b8ea77308 241 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 7 239 6.3E-81 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD JV59_36520 ee617ed1aa6a3bc006052a5b8ea77308 241 SUPERFAMILY SSF48452 31 119 1.14E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_36520 ee617ed1aa6a3bc006052a5b8ea77308 241 Pfam PF13525 Outer membrane lipoprotein 26 235 4.4E-81 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like JV59_01900 65b39b029b95bfd7aa926caa88fab91b 444 SUPERFAMILY SSF56954 1 426 2.49E-87 T 14-10-2018 JV59_01900 65b39b029b95bfd7aa926caa88fab91b 444 Gene3D G3DSA:1.20.1600.10 23 442 8.9E-118 T 14-10-2018 JV59_01900 65b39b029b95bfd7aa926caa88fab91b 444 Pfam PF02321 Outer membrane efflux protein 233 420 1.2E-32 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 JV59_01900 65b39b029b95bfd7aa926caa88fab91b 444 Pfam PF02321 Outer membrane efflux protein 26 209 4.6E-28 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 JV59_01900 65b39b029b95bfd7aa926caa88fab91b 444 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 434 4.3E-103 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 JV59_17785 dd9fbede03602d61ef07ff2ce266a76d 286 Pfam PF00924 Mechanosensitive ion channel 56 184 1.3E-15 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 JV59_17785 dd9fbede03602d61ef07ff2ce266a76d 286 SUPERFAMILY SSF50182 96 169 6.54E-10 T 14-10-2018 IPR010920 LSM domain superfamily JV59_01585 dcaa84f3910ee646667d143307fcbb5e 409 SUPERFAMILY SSF111352 12 383 2.09E-105 T 14-10-2018 JV59_01585 dcaa84f3910ee646667d143307fcbb5e 409 Pfam PF00909 Ammonium Transporter Family 18 402 1.2E-99 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 JV59_01585 dcaa84f3910ee646667d143307fcbb5e 409 Gene3D G3DSA:1.10.3430.10 2 408 2.5E-119 T 14-10-2018 IPR029020 Ammonium/urea transporter JV59_01585 dcaa84f3910ee646667d143307fcbb5e 409 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 JV59_01585 dcaa84f3910ee646667d143307fcbb5e 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 12 405 3.4E-206 T 14-10-2018 IPR019879 Ammonium transporter, marine subtype JV59_32315 1ee3da615d78bef63f6a68b29a84715b 156 Pfam PF07278 Protein of unknown function (DUF1441) 9 113 5.4E-9 T 14-10-2018 IPR009901 Bacteriophage VT1-Sakai, H0025 JV59_27470 2c1fe6954e070214136409f29b6d6efd 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 JV59_27470 2c1fe6954e070214136409f29b6d6efd 196 SUPERFAMILY SSF53178 5 194 2.49E-68 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 JV59_27470 2c1fe6954e070214136409f29b6d6efd 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.385 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 JV59_27470 2c1fe6954e070214136409f29b6d6efd 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 191 4.3E-68 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 JV59_27470 2c1fe6954e070214136409f29b6d6efd 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 JV59_27470 2c1fe6954e070214136409f29b6d6efd 196 Gene3D G3DSA:3.40.50.1470 1 196 2.5E-75 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 JV59_27470 2c1fe6954e070214136409f29b6d6efd 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 190 2.0E-52 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 JV59_28775 1665e5c837cbcefd7340807c2e4aca15 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 1.7E-112 T 14-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JV59_28775 1665e5c837cbcefd7340807c2e4aca15 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 57.539 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JV59_28775 1665e5c837cbcefd7340807c2e4aca15 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 2.5E-37 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JV59_28775 1665e5c837cbcefd7340807c2e4aca15 400 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 1.5E-30 T 14-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JV59_28775 1665e5c837cbcefd7340807c2e4aca15 400 Gene3D G3DSA:3.40.50.720 1 399 8.1E-181 T 14-10-2018 JV59_20780 5c77c83c44728852b7fcf19fe0c22b9d 216 SUPERFAMILY SSF46689 9 85 1.28E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_20780 5c77c83c44728852b7fcf19fe0c22b9d 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 65 2.4E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_20780 5c77c83c44728852b7fcf19fe0c22b9d 216 Gene3D G3DSA:1.10.357.10 1 215 1.9E-61 T 14-10-2018 JV59_20780 5c77c83c44728852b7fcf19fe0c22b9d 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 3.5E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_20780 5c77c83c44728852b7fcf19fe0c22b9d 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 3.5E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_27950 fd8fe675cc38b160a96263beb454217e 240 SUPERFAMILY SSF46894 8 102 3.68E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_27950 fd8fe675cc38b160a96263beb454217e 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 31 99 1.2E-9 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_27950 fd8fe675cc38b160a96263beb454217e 240 SMART SM00862 28 100 0.0013 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_27950 fd8fe675cc38b160a96263beb454217e 240 Gene3D G3DSA:1.10.10.10 7 120 7.2E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_26250 442eed79e4c62ee309770ed22fbdbacd 534 SUPERFAMILY SSF161098 12 257 2.4E-41 T 14-10-2018 IPR035906 MetI-like superfamily JV59_26250 442eed79e4c62ee309770ed22fbdbacd 534 SUPERFAMILY SSF161098 278 522 1.31E-32 T 14-10-2018 IPR035906 MetI-like superfamily JV59_26250 442eed79e4c62ee309770ed22fbdbacd 534 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 64 256 1.9E-7 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_26250 442eed79e4c62ee309770ed22fbdbacd 534 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 363 512 3.9E-9 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_26250 442eed79e4c62ee309770ed22fbdbacd 534 Gene3D G3DSA:1.10.3720.10 5 264 3.6E-43 T 14-10-2018 IPR035906 MetI-like superfamily JV59_26250 442eed79e4c62ee309770ed22fbdbacd 534 Gene3D G3DSA:1.10.3720.10 284 528 1.4E-28 T 14-10-2018 IPR035906 MetI-like superfamily JV59_26250 442eed79e4c62ee309770ed22fbdbacd 534 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 11 518 6.8E-162 T 14-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 JV59_35895 46685f64a4e4c36218c3192f64a65f11 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 84.196 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 JV59_35895 46685f64a4e4c36218c3192f64a65f11 487 SUPERFAMILY SSF54631 95 203 3.03E-25 T 14-10-2018 JV59_35895 46685f64a4e4c36218c3192f64a65f11 487 SUPERFAMILY SSF51412 1 477 1.31E-122 T 14-10-2018 JV59_35895 46685f64a4e4c36218c3192f64a65f11 487 PIRSF PIRSF000130 1 487 6.5E-200 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 JV59_35895 46685f64a4e4c36218c3192f64a65f11 487 Pfam PF00571 CBS domain 153 201 0.0021 T 14-10-2018 IPR000644 CBS domain JV59_35895 46685f64a4e4c36218c3192f64a65f11 487 Pfam PF00571 CBS domain 95 140 3.9E-10 T 14-10-2018 IPR000644 CBS domain JV59_35895 46685f64a4e4c36218c3192f64a65f11 487 SMART SM00116 158 206 2.9E-5 T 14-10-2018 IPR000644 CBS domain JV59_35895 46685f64a4e4c36218c3192f64a65f11 487 SMART SM00116 96 144 3.1E-11 T 14-10-2018 IPR000644 CBS domain JV59_35895 46685f64a4e4c36218c3192f64a65f11 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 5.9E-161 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 JV59_35895 46685f64a4e4c36218c3192f64a65f11 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 JV59_35895 46685f64a4e4c36218c3192f64a65f11 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 1.5E-195 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 JV59_35895 46685f64a4e4c36218c3192f64a65f11 487 Gene3D G3DSA:3.20.20.70 1 486 3.0E-209 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_35895 46685f64a4e4c36218c3192f64a65f11 487 SMART SM01240 7 473 0.0 T 14-10-2018 JV59_17275 d3e2ffbc967f49ef61a1598aea48e929 139 Gene3D G3DSA:3.40.1650.10 8 136 2.3E-37 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 JV59_17275 d3e2ffbc967f49ef61a1598aea48e929 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 7.9E-48 T 14-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 JV59_17275 d3e2ffbc967f49ef61a1598aea48e929 139 SUPERFAMILY SSF102546 1 139 1.24E-43 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 JV59_17275 d3e2ffbc967f49ef61a1598aea48e929 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 33.175 T 14-10-2018 IPR023064 D-ribose pyranase GO:0016872 JV59_24410 c6f51a03c9a328406d34a706d70d898c 169 Gene3D G3DSA:3.30.470.20 4 147 2.9E-11 T 14-10-2018 JV59_24410 c6f51a03c9a328406d34a706d70d898c 169 SUPERFAMILY SSF56059 6 69 8.07E-7 T 14-10-2018 JV59_34175 8b912d2f5718e4a55badcc2c85b20ac3 333 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 46 315 1.6E-74 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 JV59_34175 8b912d2f5718e4a55badcc2c85b20ac3 333 Gene3D G3DSA:3.40.190.170 27 332 7.5E-92 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily JV59_34175 8b912d2f5718e4a55badcc2c85b20ac3 333 PIRSF PIRSF006470 1 329 2.6E-81 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 JV59_34175 8b912d2f5718e4a55badcc2c85b20ac3 333 SUPERFAMILY SSF53850 144 263 2.82E-5 T 14-10-2018 JV59_34175 8b912d2f5718e4a55badcc2c85b20ac3 333 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 47 286 6.1E-61 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 JV59_17260 ee8864d1cf869ae5411e28483b88b43f 153 Pfam PF06271 RDD family 8 135 1.0E-25 T 14-10-2018 IPR010432 RDD JV59_30900 2ba645d6d23771d5d6807e5bbd2589da 1021 SUPERFAMILY SSF82714 693 777 2.49E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_30900 2ba645d6d23771d5d6807e5bbd2589da 1021 Gene3D G3DSA:3.30.70.1440 642 837 4.2E-256 T 14-10-2018 JV59_30900 2ba645d6d23771d5d6807e5bbd2589da 1021 Gene3D G3DSA:1.20.1640.10 499 995 4.2E-256 T 14-10-2018 JV59_30900 2ba645d6d23771d5d6807e5bbd2589da 1021 Gene3D G3DSA:3.30.70.1430 553 641 4.2E-256 T 14-10-2018 JV59_30900 2ba645d6d23771d5d6807e5bbd2589da 1021 Gene3D G3DSA:3.30.2090.10 176 266 4.2E-256 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_30900 2ba645d6d23771d5d6807e5bbd2589da 1021 SUPERFAMILY SSF82866 776 998 2.22E-40 T 14-10-2018 JV59_30900 2ba645d6d23771d5d6807e5bbd2589da 1021 SUPERFAMILY SSF82866 295 486 2.09E-44 T 14-10-2018 JV59_30900 2ba645d6d23771d5d6807e5bbd2589da 1021 PRINTS PR00702 Acriflavin resistance protein family signature 598 612 1.2E-60 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_30900 2ba645d6d23771d5d6807e5bbd2589da 1021 PRINTS PR00702 Acriflavin resistance protein family signature 354 375 1.2E-60 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_30900 2ba645d6d23771d5d6807e5bbd2589da 1021 PRINTS PR00702 Acriflavin resistance protein family signature 327 350 1.2E-60 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_30900 2ba645d6d23771d5d6807e5bbd2589da 1021 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 1.2E-60 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_30900 2ba645d6d23771d5d6807e5bbd2589da 1021 PRINTS PR00702 Acriflavin resistance protein family signature 435 458 1.2E-60 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_30900 2ba645d6d23771d5d6807e5bbd2589da 1021 PRINTS PR00702 Acriflavin resistance protein family signature 7 31 1.2E-60 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_30900 2ba645d6d23771d5d6807e5bbd2589da 1021 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 1.2E-60 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_30900 2ba645d6d23771d5d6807e5bbd2589da 1021 PRINTS PR00702 Acriflavin resistance protein family signature 35 53 1.2E-60 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_30900 2ba645d6d23771d5d6807e5bbd2589da 1021 Pfam PF00873 AcrB/AcrD/AcrF family 2 998 8.4E-231 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_30900 2ba645d6d23771d5d6807e5bbd2589da 1021 SUPERFAMILY SSF82714 180 262 1.2E-14 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_30900 2ba645d6d23771d5d6807e5bbd2589da 1021 Gene3D G3DSA:1.20.1640.10 7 498 4.2E-256 T 14-10-2018 JV59_30900 2ba645d6d23771d5d6807e5bbd2589da 1021 SUPERFAMILY SSF82693 137 321 5.18E-13 T 14-10-2018 JV59_30900 2ba645d6d23771d5d6807e5bbd2589da 1021 SUPERFAMILY SSF82693 39 129 5.23E-17 T 14-10-2018 JV59_30900 2ba645d6d23771d5d6807e5bbd2589da 1021 Gene3D G3DSA:3.30.70.1430 37 788 4.2E-256 T 14-10-2018 JV59_30900 2ba645d6d23771d5d6807e5bbd2589da 1021 Gene3D G3DSA:3.30.2090.10 692 780 4.2E-256 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_30900 2ba645d6d23771d5d6807e5bbd2589da 1021 SUPERFAMILY SSF82693 551 644 9.94E-9 T 14-10-2018 JV59_30900 2ba645d6d23771d5d6807e5bbd2589da 1021 Gene3D G3DSA:3.30.70.1320 131 323 4.2E-256 T 14-10-2018 JV59_21315 cea20ab95a80b4f1960f94f96119d49c 99 SUPERFAMILY SSF81296 11 95 7.93E-14 T 14-10-2018 IPR014756 Immunoglobulin E-set JV59_21315 cea20ab95a80b4f1960f94f96119d49c 99 Gene3D G3DSA:2.60.40.10 5 98 6.9E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_16425 0496fe0894436534a2abc94f56314a22 687 Gene3D G3DSA:3.20.20.80 190 422 8.0E-57 T 14-10-2018 JV59_16425 0496fe0894436534a2abc94f56314a22 687 SUPERFAMILY SSF51445 197 658 9.25E-87 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_16425 0496fe0894436534a2abc94f56314a22 687 SMART SM00642 207 649 2.9E-92 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_16425 0496fe0894436534a2abc94f56314a22 687 Gene3D G3DSA:3.20.20.80 428 656 4.2E-38 T 14-10-2018 JV59_16425 0496fe0894436534a2abc94f56314a22 687 PIRSF PIRSF036917 1 687 0.0 T 14-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 JV59_16425 0496fe0894436534a2abc94f56314a22 687 Pfam PF00128 Alpha amylase, catalytic domain 240 609 8.5E-54 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_35335 724afc166f565fda167c9939954055bf 114 Pfam PF11169 Protein of unknown function (DUF2956) 8 111 9.9E-42 T 14-10-2018 IPR021339 Protein of unknown function DUF2956 JV59_17425 a2470e6ccd5c49474dfb323847062701 393 Gene3D G3DSA:3.40.190.10 135 385 1.8E-133 T 14-10-2018 JV59_17425 a2470e6ccd5c49474dfb323847062701 393 Pfam PF13416 Bacterial extracellular solute-binding protein 47 322 6.6E-44 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein JV59_17425 a2470e6ccd5c49474dfb323847062701 393 PRINTS PR00181 Maltose binding protein signature 67 85 2.3E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 JV59_17425 a2470e6ccd5c49474dfb323847062701 393 PRINTS PR00181 Maltose binding protein signature 230 249 2.3E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 JV59_17425 a2470e6ccd5c49474dfb323847062701 393 PRINTS PR00181 Maltose binding protein signature 168 187 2.3E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 JV59_17425 a2470e6ccd5c49474dfb323847062701 393 PRINTS PR00181 Maltose binding protein signature 296 317 2.3E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 JV59_17425 a2470e6ccd5c49474dfb323847062701 393 PRINTS PR00181 Maltose binding protein signature 148 167 2.3E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 JV59_17425 a2470e6ccd5c49474dfb323847062701 393 PRINTS PR00181 Maltose binding protein signature 354 373 2.3E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 JV59_17425 a2470e6ccd5c49474dfb323847062701 393 PRINTS PR00181 Maltose binding protein signature 127 146 2.3E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 JV59_17425 a2470e6ccd5c49474dfb323847062701 393 PRINTS PR00181 Maltose binding protein signature 33 51 2.3E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 JV59_17425 a2470e6ccd5c49474dfb323847062701 393 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 130 147 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 JV59_17425 a2470e6ccd5c49474dfb323847062701 393 Gene3D G3DSA:3.40.190.10 45 354 1.8E-133 T 14-10-2018 JV59_17425 a2470e6ccd5c49474dfb323847062701 393 SUPERFAMILY SSF53850 25 392 9.83E-90 T 14-10-2018 JV59_26570 35a8c38b48de3b4a2c149b5920ddd00b 117 Pfam PF01245 Ribosomal protein L19 3 113 1.3E-50 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26570 35a8c38b48de3b4a2c149b5920ddd00b 117 SUPERFAMILY SSF50104 2 115 3.61E-48 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily JV59_26570 35a8c38b48de3b4a2c149b5920ddd00b 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 1.2E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26570 35a8c38b48de3b4a2c149b5920ddd00b 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 1.2E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26570 35a8c38b48de3b4a2c149b5920ddd00b 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 1.2E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26570 35a8c38b48de3b4a2c149b5920ddd00b 117 Gene3D G3DSA:2.30.30.790 3 117 1.9E-17 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26570 35a8c38b48de3b4a2c149b5920ddd00b 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26570 35a8c38b48de3b4a2c149b5920ddd00b 117 PIRSF PIRSF002191 1 117 3.0E-52 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26570 35a8c38b48de3b4a2c149b5920ddd00b 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.334 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26570 35a8c38b48de3b4a2c149b5920ddd00b 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 7.4E-52 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_18865 8114e3f0f722ef44ed889664a0986eea 587 SMART SM00283 316 584 2.2E-59 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_18865 8114e3f0f722ef44ed889664a0986eea 587 Gene3D G3DSA:1.10.287.950 254 586 8.6E-65 T 14-10-2018 JV59_18865 8114e3f0f722ef44ed889664a0986eea 587 SUPERFAMILY SSF58104 279 585 3.4E-67 T 14-10-2018 JV59_18865 8114e3f0f722ef44ed889664a0986eea 587 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 370 551 1.2E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_21865 96c1a257bdc469fb571738113ce56240 462 Pfam PF01554 MatE 20 180 4.6E-20 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_21865 96c1a257bdc469fb571738113ce56240 462 Pfam PF01554 MatE 242 402 5.4E-22 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_21865 96c1a257bdc469fb571738113ce56240 462 PIRSF PIRSF006603 1 441 9.6E-94 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_21865 96c1a257bdc469fb571738113ce56240 462 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 413 4.9E-54 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_29925 217320e2306f2ce8077a7191862a19b5 285 SUPERFAMILY SSF56784 46 222 8.41E-9 T 14-10-2018 IPR036412 HAD-like superfamily JV59_29925 217320e2306f2ce8077a7191862a19b5 285 ProDom PD187055 MEMBRANE OUTER PRECURSOR SIGNAL EXPORTED CT371 CPN1072 CPN1073/CP0776/CPJ1073/CPB1118 CP0777 CPJ1072 49 224 0.009 T 14-10-2018 JV59_29925 217320e2306f2ce8077a7191862a19b5 285 Pfam PF11019 Protein of unknown function (DUF2608) 26 272 2.2E-72 T 14-10-2018 IPR022565 Protein of unknown function DUF2608 JV59_19770 60f1db8b4a0c0ea9833ce38d60b38391 418 SUPERFAMILY SSF50969 76 240 1.88E-6 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like JV59_00150 a6c1941e9fc319144ea7c895305da37c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 8.2E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JV59_00150 a6c1941e9fc319144ea7c895305da37c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 8.2E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JV59_00150 a6c1941e9fc319144ea7c895305da37c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 8.2E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JV59_00150 a6c1941e9fc319144ea7c895305da37c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 8.2E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JV59_00150 a6c1941e9fc319144ea7c895305da37c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 8.2E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JV59_00150 a6c1941e9fc319144ea7c895305da37c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 8.2E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JV59_00150 a6c1941e9fc319144ea7c895305da37c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 8.2E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JV59_00150 a6c1941e9fc319144ea7c895305da37c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 8.2E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JV59_00150 a6c1941e9fc319144ea7c895305da37c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 8.2E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JV59_00150 a6c1941e9fc319144ea7c895305da37c 320 Gene3D G3DSA:3.40.50.460 143 252 3.6E-117 T 14-10-2018 JV59_00150 a6c1941e9fc319144ea7c895305da37c 320 SUPERFAMILY SSF53784 3 312 7.98E-113 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JV59_00150 a6c1941e9fc319144ea7c895305da37c 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 5.3E-131 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 JV59_00150 a6c1941e9fc319144ea7c895305da37c 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.394 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 JV59_00150 a6c1941e9fc319144ea7c895305da37c 320 PIRSF PIRSF000532 1 320 4.8E-129 T 14-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 JV59_00150 a6c1941e9fc319144ea7c895305da37c 320 Gene3D G3DSA:3.40.50.450 4 287 3.6E-117 T 14-10-2018 JV59_00150 a6c1941e9fc319144ea7c895305da37c 320 Pfam PF00365 Phosphofructokinase 4 276 4.5E-109 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JV59_00150 a6c1941e9fc319144ea7c895305da37c 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 14-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JV59_34585 26eb5b608a54ef53152ce8b13b9103a9 277 SUPERFAMILY SSF55021 4 55 2.54E-8 T 14-10-2018 JV59_34585 26eb5b608a54ef53152ce8b13b9103a9 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 3.5E-122 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 JV59_34585 26eb5b608a54ef53152ce8b13b9103a9 277 PIRSF PIRSF036480 1 277 1.4E-112 T 14-10-2018 JV59_34585 26eb5b608a54ef53152ce8b13b9103a9 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 5.8E-64 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 JV59_34585 26eb5b608a54ef53152ce8b13b9103a9 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 5.8E-64 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 JV59_34585 26eb5b608a54ef53152ce8b13b9103a9 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 5.8E-64 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 JV59_34585 26eb5b608a54ef53152ce8b13b9103a9 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 5.8E-64 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 JV59_34585 26eb5b608a54ef53152ce8b13b9103a9 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 5.8E-64 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 JV59_34585 26eb5b608a54ef53152ce8b13b9103a9 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 5.8E-64 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 JV59_34585 26eb5b608a54ef53152ce8b13b9103a9 277 Gene3D G3DSA:3.40.50.170 81 277 4.1E-67 T 14-10-2018 JV59_34585 26eb5b608a54ef53152ce8b13b9103a9 277 Pfam PF00551 Formyl transferase 82 259 3.2E-49 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JV59_34585 26eb5b608a54ef53152ce8b13b9103a9 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 44.957 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 JV59_34585 26eb5b608a54ef53152ce8b13b9103a9 277 SUPERFAMILY SSF53328 82 276 1.44E-59 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JV59_34585 26eb5b608a54ef53152ce8b13b9103a9 277 Gene3D G3DSA:3.30.70.260 1 77 6.5E-15 T 14-10-2018 JV59_34585 26eb5b608a54ef53152ce8b13b9103a9 277 Pfam PF01842 ACT domain 5 65 5.6E-7 T 14-10-2018 IPR002912 ACT domain JV59_27585 a7cb0a0a2120f59abeb4d1aea671d399 441 Pfam PF03553 Na+/H+ antiporter family 150 435 1.5E-75 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 JV59_27585 a7cb0a0a2120f59abeb4d1aea671d399 441 Pfam PF13726 Na+-H+ antiporter family 2 88 9.7E-35 T 14-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal JV59_27585 a7cb0a0a2120f59abeb4d1aea671d399 441 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 5.1E-6 T 14-10-2018 JV59_27585 a7cb0a0a2120f59abeb4d1aea671d399 441 PRINTS PR00173 Glutamate-aspartate symporter signature 374 393 5.1E-6 T 14-10-2018 JV59_36605 87cf313841493ac26d38141e5f1e1460 282 Gene3D G3DSA:3.40.50.10490 97 281 7.4E-40 T 14-10-2018 JV59_36605 87cf313841493ac26d38141e5f1e1460 282 Gene3D G3DSA:1.10.10.10 1 78 2.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_36605 87cf313841493ac26d38141e5f1e1460 282 SUPERFAMILY SSF53697 99 262 9.58E-36 T 14-10-2018 JV59_36605 87cf313841493ac26d38141e5f1e1460 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 72 1.4E-21 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 JV59_36605 87cf313841493ac26d38141e5f1e1460 282 SUPERFAMILY SSF46689 2 72 2.15E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_36605 87cf313841493ac26d38141e5f1e1460 282 Pfam PF01380 SIS domain 130 258 1.5E-22 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 JV59_23185 ba49e49ac2c91d18fac776e6a25416ec 284 Pfam PF03705 CheR methyltransferase, all-alpha domain 22 73 4.2E-14 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal JV59_23185 ba49e49ac2c91d18fac776e6a25416ec 284 Pfam PF01739 CheR methyltransferase, SAM binding domain 87 281 1.3E-59 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal JV59_23185 ba49e49ac2c91d18fac776e6a25416ec 284 Gene3D G3DSA:1.10.155.10 11 85 2.0E-21 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily JV59_23185 ba49e49ac2c91d18fac776e6a25416ec 284 Gene3D G3DSA:3.40.50.150 86 284 2.4E-63 T 14-10-2018 JV59_23185 ba49e49ac2c91d18fac776e6a25416ec 284 SUPERFAMILY SSF47757 15 86 7.06E-19 T 14-10-2018 JV59_23185 ba49e49ac2c91d18fac776e6a25416ec 284 PIRSF PIRSF000410 5 284 5.7E-97 T 14-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR JV59_23185 ba49e49ac2c91d18fac776e6a25416ec 284 SMART SM00138 21 284 9.0E-84 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JV59_23185 ba49e49ac2c91d18fac776e6a25416ec 284 SUPERFAMILY SSF53335 87 283 8.19E-55 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_23185 ba49e49ac2c91d18fac776e6a25416ec 284 PRINTS PR00996 Glutamate methyltransferase family signature 80 92 4.6E-45 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JV59_23185 ba49e49ac2c91d18fac776e6a25416ec 284 PRINTS PR00996 Glutamate methyltransferase family signature 43 56 4.6E-45 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JV59_23185 ba49e49ac2c91d18fac776e6a25416ec 284 PRINTS PR00996 Glutamate methyltransferase family signature 224 238 4.6E-45 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JV59_23185 ba49e49ac2c91d18fac776e6a25416ec 284 PRINTS PR00996 Glutamate methyltransferase family signature 153 169 4.6E-45 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JV59_23185 ba49e49ac2c91d18fac776e6a25416ec 284 PRINTS PR00996 Glutamate methyltransferase family signature 118 138 4.6E-45 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JV59_23185 ba49e49ac2c91d18fac776e6a25416ec 284 PRINTS PR00996 Glutamate methyltransferase family signature 243 266 4.6E-45 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JV59_37320 5cfa24d4d285cb1955b6f22041a883f7 245 Gene3D G3DSA:3.40.190.10 109 211 3.7E-23 T 14-10-2018 JV59_37320 5cfa24d4d285cb1955b6f22041a883f7 245 SUPERFAMILY SSF53850 30 240 1.58E-35 T 14-10-2018 JV59_37320 5cfa24d4d285cb1955b6f22041a883f7 245 Gene3D G3DSA:3.40.190.10 35 238 3.7E-23 T 14-10-2018 JV59_37320 5cfa24d4d285cb1955b6f22041a883f7 245 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 239 3.7E-17 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_18990 d0b27e599451756eeceea009956bd7e2 326 Gene3D G3DSA:3.40.50.2300 62 154 2.1E-20 T 14-10-2018 JV59_18990 d0b27e599451756eeceea009956bd7e2 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 2.7E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_18990 d0b27e599451756eeceea009956bd7e2 326 SUPERFAMILY SSF47413 1 58 1.41E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_18990 d0b27e599451756eeceea009956bd7e2 326 Gene3D G3DSA:1.10.260.40 1 61 3.6E-26 T 14-10-2018 JV59_18990 d0b27e599451756eeceea009956bd7e2 326 SUPERFAMILY SSF53822 60 313 1.03E-37 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_18990 d0b27e599451756eeceea009956bd7e2 326 Gene3D G3DSA:3.40.50.2300 155 326 1.6E-25 T 14-10-2018 JV59_18990 d0b27e599451756eeceea009956bd7e2 326 SMART SM00354 1 73 5.5E-28 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 JV59_18990 d0b27e599451756eeceea009956bd7e2 326 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 14-10-2018 JV59_18990 d0b27e599451756eeceea009956bd7e2 326 Pfam PF13407 Periplasmic binding protein domain 64 260 1.7E-13 T 14-10-2018 IPR025997 Periplasmic binding protein JV59_18990 d0b27e599451756eeceea009956bd7e2 326 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 326 6.2E-139 T 14-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 JV59_33375 e97397079911f9f8451390c1853e88f7 443 Gene3D G3DSA:3.40.50.300 18 172 6.9E-23 T 14-10-2018 JV59_33375 e97397079911f9f8451390c1853e88f7 443 SUPERFAMILY SSF46689 363 416 1.25E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_33375 e97397079911f9f8451390c1853e88f7 443 Gene3D G3DSA:1.10.10.60 360 418 2.6E-12 T 14-10-2018 JV59_33375 e97397079911f9f8451390c1853e88f7 443 SMART SM00342 327 411 4.1E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_33375 e97397079911f9f8451390c1853e88f7 443 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 364 407 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JV59_33375 e97397079911f9f8451390c1853e88f7 443 Pfam PF12833 Helix-turn-helix domain 333 412 3.1E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_33375 e97397079911f9f8451390c1853e88f7 443 Gene3D G3DSA:1.10.8.60 173 247 1.9E-11 T 14-10-2018 JV59_33375 e97397079911f9f8451390c1853e88f7 443 SUPERFAMILY SSF46689 311 359 6.0E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_33375 e97397079911f9f8451390c1853e88f7 443 Pfam PF14532 Sigma-54 interaction domain 19 136 9.4E-16 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JV59_33375 e97397079911f9f8451390c1853e88f7 443 Gene3D G3DSA:1.10.10.60 310 359 2.9E-12 T 14-10-2018 JV59_33375 e97397079911f9f8451390c1853e88f7 443 SUPERFAMILY SSF52540 19 241 2.0E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_37780 fa78a2f4332bc91f18467e2410be8abe 159 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 38 153 4.1E-27 T 14-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE JV59_31190 d2266b7cd857bb0e7b039aee119b8693 401 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 6 398 7.2E-73 T 14-10-2018 IPR012843 Type III secretion system YscD/HrpQ JV59_31190 d2266b7cd857bb0e7b039aee119b8693 401 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 152 395 2.0E-17 T 14-10-2018 IPR032034 Yop protein translocation protein D, periplasmic domain JV59_38495 d8213f0cc2917d22afdba7a667a72aa5 171 SUPERFAMILY SSF55729 1 170 1.56E-36 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_38495 d8213f0cc2917d22afdba7a667a72aa5 171 Gene3D G3DSA:3.40.630.30 3 171 1.8E-41 T 14-10-2018 JV59_38495 d8213f0cc2917d22afdba7a667a72aa5 171 Pfam PF13302 Acetyltransferase (GNAT) domain 6 146 1.6E-22 T 14-10-2018 IPR000182 GNAT domain JV59_05730 3350b033c17b746e17258a80b485b3b1 131 Pfam PF00293 NUDIX domain 9 108 2.0E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JV59_05730 3350b033c17b746e17258a80b485b3b1 131 SUPERFAMILY SSF55811 5 106 4.6E-23 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JV59_05730 3350b033c17b746e17258a80b485b3b1 131 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JV59_05730 3350b033c17b746e17258a80b485b3b1 131 Gene3D G3DSA:3.90.79.10 1 130 4.0E-22 T 14-10-2018 JV59_16430 a16119c625f086a7ae671333fdf27fcb 123 Gene3D G3DSA:1.10.260.40 6 55 2.4E-5 T 14-10-2018 JV59_39580 e523d9d3676cc44f9ef3cc8d1cc623f7 274 Gene3D G3DSA:1.10.3210.10 2 274 2.1E-67 T 14-10-2018 JV59_39580 e523d9d3676cc44f9ef3cc8d1cc623f7 274 Pfam PF08668 HDOD domain 13 204 2.7E-52 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD JV59_39580 e523d9d3676cc44f9ef3cc8d1cc623f7 274 SUPERFAMILY SSF109604 6 256 4.08E-57 T 14-10-2018 JV59_27640 6b36e0a44f136b97d5648a4c8551eadd 230 SUPERFAMILY SSF53955 59 191 2.56E-35 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily JV59_27640 6b36e0a44f136b97d5648a4c8551eadd 230 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 79 107 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 JV59_27640 6b36e0a44f136b97d5648a4c8551eadd 230 Gene3D G3DSA:1.10.530.10 43 189 4.9E-33 T 14-10-2018 JV59_27640 6b36e0a44f136b97d5648a4c8551eadd 230 Pfam PF01464 Transglycosylase SLT domain 65 171 1.1E-27 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 JV59_38505 dd46b34a6be38c0c43487e0ce6da50bc 77 Gene3D G3DSA:1.10.1200.10 1 76 2.9E-14 T 14-10-2018 IPR036736 ACP-like superfamily JV59_38505 dd46b34a6be38c0c43487e0ce6da50bc 77 Pfam PF00550 Phosphopantetheine attachment site 18 70 1.6E-4 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain JV59_38505 dd46b34a6be38c0c43487e0ce6da50bc 77 SUPERFAMILY SSF47336 3 76 8.38E-9 T 14-10-2018 IPR036736 ACP-like superfamily JV59_16470 a44a10628201f20d49579233ca483dcf 413 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 316 412 1.5E-20 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 JV59_16470 a44a10628201f20d49579233ca483dcf 413 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 4.0E-26 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 JV59_16470 a44a10628201f20d49579233ca483dcf 413 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 4 410 4.7E-121 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 JV59_16470 a44a10628201f20d49579233ca483dcf 413 Gene3D G3DSA:3.40.50.720 205 413 5.2E-59 T 14-10-2018 JV59_16470 a44a10628201f20d49579233ca483dcf 413 SUPERFAMILY SSF48179 206 298 8.67E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JV59_16470 a44a10628201f20d49579233ca483dcf 413 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 4 189 6.7E-60 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 JV59_16470 a44a10628201f20d49579233ca483dcf 413 SUPERFAMILY SSF52413 307 412 9.68E-24 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 JV59_16470 a44a10628201f20d49579233ca483dcf 413 SMART SM00984 316 411 7.6E-22 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 JV59_16470 a44a10628201f20d49579233ca483dcf 413 SUPERFAMILY SSF51735 4 198 2.19E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_16470 a44a10628201f20d49579233ca483dcf 413 PIRSF PIRSF000124 3 413 6.0E-82 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 JV59_16470 a44a10628201f20d49579233ca483dcf 413 PIRSF PIRSF500136 1 413 3.8E-147 T 14-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 JV59_16470 a44a10628201f20d49579233ca483dcf 413 Gene3D G3DSA:3.40.50.720 1 204 9.1E-66 T 14-10-2018 JV59_36650 ef67ccc0b99f5fde59d7fd8a31a06e60 170 TIGRFAM TIGR00077 lspA: signal peptidase II 10 169 4.5E-49 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JV59_36650 ef67ccc0b99f5fde59d7fd8a31a06e60 170 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 167 16.842 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JV59_36650 ef67ccc0b99f5fde59d7fd8a31a06e60 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 3.9E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JV59_36650 ef67ccc0b99f5fde59d7fd8a31a06e60 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 3.9E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JV59_36650 ef67ccc0b99f5fde59d7fd8a31a06e60 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 121 3.9E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JV59_36650 ef67ccc0b99f5fde59d7fd8a31a06e60 170 Pfam PF01252 Signal peptidase (SPase) II 19 161 3.8E-38 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JV59_36650 ef67ccc0b99f5fde59d7fd8a31a06e60 170 ProSitePatterns PS00855 Signal peptidases II signature. 109 121 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JV59_30755 0d821b4ff7747bae2009ad695bca0a74 67 Pfam PF14255 Cysteine-rich CPXCG 9 59 5.2E-19 T 14-10-2018 IPR025990 Cysteine-rich CPXCG protein JV59_30755 0d821b4ff7747bae2009ad695bca0a74 67 PIRSF PIRSF037225 1 65 3.7E-24 T 14-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 JV59_31820 1040b1c39e5813eb93ef9368c038b7ef 117 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 1.9E-32 T 14-10-2018 IPR021284 Protein of unknown function DUF2750 JV59_23545 ef684d848984a6982fbe8ad18e0b5058 421 SUPERFAMILY SSF55298 291 418 1.73E-29 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_23545 ef684d848984a6982fbe8ad18e0b5058 421 Gene3D G3DSA:3.30.1330.40 142 278 3.7E-30 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_23545 ef684d848984a6982fbe8ad18e0b5058 421 Gene3D G3DSA:3.30.1330.40 5 135 2.9E-32 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_23545 ef684d848984a6982fbe8ad18e0b5058 421 Gene3D G3DSA:3.30.1330.40 290 417 6.5E-30 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_23545 ef684d848984a6982fbe8ad18e0b5058 421 SUPERFAMILY SSF55298 21 135 7.38E-31 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_23545 ef684d848984a6982fbe8ad18e0b5058 421 Pfam PF01042 Endoribonuclease L-PSP 168 272 1.4E-21 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 JV59_23545 ef684d848984a6982fbe8ad18e0b5058 421 Pfam PF01042 Endoribonuclease L-PSP 312 411 4.3E-21 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 JV59_23545 ef684d848984a6982fbe8ad18e0b5058 421 Pfam PF01042 Endoribonuclease L-PSP 24 128 7.6E-24 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 JV59_23545 ef684d848984a6982fbe8ad18e0b5058 421 SUPERFAMILY SSF55298 144 281 1.16E-29 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_25420 ba136ad4c5bbb334444bd74487153e54 251 Pfam PF13714 Phosphoenolpyruvate phosphomutase 2 237 3.5E-68 T 14-10-2018 JV59_25420 ba136ad4c5bbb334444bd74487153e54 251 Gene3D G3DSA:3.20.20.60 1 239 2.3E-68 T 14-10-2018 JV59_25420 ba136ad4c5bbb334444bd74487153e54 251 SUPERFAMILY SSF51621 1 246 3.63E-56 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JV59_37260 11806555935ea03963d61d7b326b9a43 860 SUPERFAMILY SSF55186 551 711 2.35E-53 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 JV59_37260 11806555935ea03963d61d7b326b9a43 860 Gene3D G3DSA:3.30.54.20 623 676 1.9E-51 T 14-10-2018 JV59_37260 11806555935ea03963d61d7b326b9a43 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 5.3E-18 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 JV59_37260 11806555935ea03963d61d7b326b9a43 860 Pfam PF01411 tRNA synthetases class II (A) 7 555 2.5E-224 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 JV59_37260 11806555935ea03963d61d7b326b9a43 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 JV59_37260 11806555935ea03963d61d7b326b9a43 860 SUPERFAMILY SSF101353 255 464 6.93E-60 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 JV59_37260 11806555935ea03963d61d7b326b9a43 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 4.6E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 JV59_37260 11806555935ea03963d61d7b326b9a43 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 4.6E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 JV59_37260 11806555935ea03963d61d7b326b9a43 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 4.6E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 JV59_37260 11806555935ea03963d61d7b326b9a43 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 4.6E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 JV59_37260 11806555935ea03963d61d7b326b9a43 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 4.6E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 JV59_37260 11806555935ea03963d61d7b326b9a43 860 SMART SM00863 652 695 4.1E-21 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 JV59_37260 11806555935ea03963d61d7b326b9a43 860 Gene3D G3DSA:2.40.30.130 459 551 2.1E-10 T 14-10-2018 JV59_37260 11806555935ea03963d61d7b326b9a43 860 Gene3D G3DSA:3.30.930.10 2 251 2.0E-119 T 14-10-2018 JV59_37260 11806555935ea03963d61d7b326b9a43 860 Gene3D G3DSA:3.10.310.40 749 857 3.5E-34 T 14-10-2018 JV59_37260 11806555935ea03963d61d7b326b9a43 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 196.426 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 JV59_37260 11806555935ea03963d61d7b326b9a43 860 Pfam PF02272 DHHA1 domain 723 854 2.1E-29 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 JV59_37260 11806555935ea03963d61d7b326b9a43 860 Gene3D G3DSA:3.30.980.10 562 696 1.9E-51 T 14-10-2018 JV59_37260 11806555935ea03963d61d7b326b9a43 860 SUPERFAMILY SSF50447 454 551 1.94E-17 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JV59_37260 11806555935ea03963d61d7b326b9a43 860 SUPERFAMILY SSF55681 3 254 1.29E-107 T 14-10-2018 JV59_26095 d8408dea70250a6ccaf89a62e7605ccb 131 Pfam PF02635 DsrE/DsrF-like family 5 131 4.1E-26 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein JV59_26095 d8408dea70250a6ccaf89a62e7605ccb 131 Gene3D G3DSA:3.40.1260.10 1 131 1.2E-50 T 14-10-2018 IPR027396 DsrEFH-like JV59_26095 d8408dea70250a6ccaf89a62e7605ccb 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 6 131 1.0E-52 T 14-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 JV59_26095 d8408dea70250a6ccaf89a62e7605ccb 131 SUPERFAMILY SSF75169 6 131 7.06E-36 T 14-10-2018 IPR027396 DsrEFH-like JV59_20150 11f9b36a04f37d253d411e8e43ffeee2 300 PIRSF PIRSF016660 1 300 3.5E-117 T 14-10-2018 IPR008526 Inner membrane protein YedI JV59_20150 11f9b36a04f37d253d411e8e43ffeee2 300 Pfam PF05661 Protein of unknown function (DUF808) 4 288 1.1E-112 T 14-10-2018 IPR008526 Inner membrane protein YedI JV59_37330 7449cbf9eb81500f57932f021dac5c82 245 Gene3D G3DSA:3.30.2350.10 4 217 2.1E-67 T 14-10-2018 JV59_37330 7449cbf9eb81500f57932f021dac5c82 245 SUPERFAMILY SSF55120 8 216 1.23E-62 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_37330 7449cbf9eb81500f57932f021dac5c82 245 Pfam PF00849 RNA pseudouridylate synthase 23 169 8.9E-29 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_37330 7449cbf9eb81500f57932f021dac5c82 245 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_30525 379df9ba923e4f4818d17c158d87a1a7 159 Gene3D G3DSA:2.40.160.20 16 159 8.1E-10 T 14-10-2018 JV59_30525 379df9ba923e4f4818d17c158d87a1a7 159 Pfam PF13505 Outer membrane protein beta-barrel domain 8 158 2.1E-10 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel JV59_30525 379df9ba923e4f4818d17c158d87a1a7 159 SUPERFAMILY SSF56925 20 158 7.59E-14 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JV59_02390 a2178c3a622a96fa101f775b2e32bd0d 416 SUPERFAMILY SSF53720 6 408 2.23E-110 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JV59_02390 a2178c3a622a96fa101f775b2e32bd0d 416 Gene3D G3DSA:3.40.605.10 15 408 3.8E-151 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JV59_02390 a2178c3a622a96fa101f775b2e32bd0d 416 Gene3D G3DSA:3.40.309.10 223 373 3.8E-151 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JV59_02390 a2178c3a622a96fa101f775b2e32bd0d 416 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 415 39.221 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 JV59_02390 a2178c3a622a96fa101f775b2e32bd0d 416 PIRSF PIRSF000151 1 415 1.3E-164 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 JV59_02390 a2178c3a622a96fa101f775b2e32bd0d 416 Pfam PF00171 Aldehyde dehydrogenase family 8 280 9.9E-17 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JV59_02390 a2178c3a622a96fa101f775b2e32bd0d 416 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 405 6.5E-169 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 JV59_02390 a2178c3a622a96fa101f775b2e32bd0d 416 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 322 343 - T 14-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 JV59_16180 6d70f4b99dd2842fb0dac512b81f492d 384 SUPERFAMILY SSF53383 31 343 1.11E-71 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_16180 6d70f4b99dd2842fb0dac512b81f492d 384 Gene3D G3DSA:3.40.640.10 42 287 1.9E-56 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_16180 6d70f4b99dd2842fb0dac512b81f492d 384 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 65 313 3.0E-21 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 JV59_17720 7af8fa308887d8fe17ad9d2acd4a0d0f 535 Pfam PF00072 Response regulator receiver domain 22 141 3.0E-8 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_17720 7af8fa308887d8fe17ad9d2acd4a0d0f 535 Gene3D G3DSA:3.40.50.2300 11 159 1.6E-11 T 14-10-2018 JV59_17720 7af8fa308887d8fe17ad9d2acd4a0d0f 535 SUPERFAMILY SSF52172 20 159 5.41E-11 T 14-10-2018 IPR011006 CheY-like superfamily JV59_17720 7af8fa308887d8fe17ad9d2acd4a0d0f 535 SMART SM00448 20 143 0.0037 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_00740 c979664dfbb4c0576ad1c5ea303c1401 347 Gene3D G3DSA:3.30.420.40 158 321 7.4E-132 T 14-10-2018 JV59_00740 c979664dfbb4c0576ad1c5ea303c1401 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 2.2E-165 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 JV59_00740 c979664dfbb4c0576ad1c5ea303c1401 347 Pfam PF06723 MreB/Mbl protein 11 338 5.1E-149 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 JV59_00740 c979664dfbb4c0576ad1c5ea303c1401 347 SUPERFAMILY SSF53067 154 340 2.83E-51 T 14-10-2018 JV59_00740 c979664dfbb4c0576ad1c5ea303c1401 347 SUPERFAMILY SSF53067 9 152 6.31E-38 T 14-10-2018 JV59_00740 c979664dfbb4c0576ad1c5ea303c1401 347 Gene3D G3DSA:3.30.420.40 14 331 7.4E-132 T 14-10-2018 JV59_00740 c979664dfbb4c0576ad1c5ea303c1401 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.6E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 JV59_00740 c979664dfbb4c0576ad1c5ea303c1401 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.6E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 JV59_00740 c979664dfbb4c0576ad1c5ea303c1401 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.6E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 JV59_00740 c979664dfbb4c0576ad1c5ea303c1401 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.6E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 JV59_00740 c979664dfbb4c0576ad1c5ea303c1401 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.6E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 JV59_00740 c979664dfbb4c0576ad1c5ea303c1401 347 Gene3D G3DSA:3.90.640.10 190 263 7.4E-132 T 14-10-2018 JV59_34430 bd4cd4981321973ba8383d5967d67103 383 Gene3D G3DSA:3.40.1090.10 11 124 2.4E-9 T 14-10-2018 JV59_34430 bd4cd4981321973ba8383d5967d67103 383 Gene3D G3DSA:3.40.1090.10 125 244 2.1E-6 T 14-10-2018 JV59_34430 bd4cd4981321973ba8383d5967d67103 383 SUPERFAMILY SSF52151 24 264 3.14E-33 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JV59_34430 bd4cd4981321973ba8383d5967d67103 383 Pfam PF01734 Patatin-like phospholipase 29 198 2.5E-18 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 JV59_29045 35107e012bd81258fd118ea564eae191 186 Gene3D G3DSA:1.10.340.30 3 186 1.1E-78 T 14-10-2018 JV59_29045 35107e012bd81258fd118ea564eae191 186 SUPERFAMILY SSF48150 4 184 2.98E-75 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 JV59_29045 35107e012bd81258fd118ea564eae191 186 Pfam PF03352 Methyladenine glycosylase 7 182 8.5E-75 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 JV59_36950 ae7c4136b5a9e05f5f1b0a1710ae8fe8 298 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 65 271 5.3E-46 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JV59_36950 ae7c4136b5a9e05f5f1b0a1710ae8fe8 298 Pfam PF10502 Signal peptidase, peptidase S26 210 268 1.5E-7 T 14-10-2018 IPR019533 Peptidase S26 JV59_36950 ae7c4136b5a9e05f5f1b0a1710ae8fe8 298 ProSitePatterns PS00760 Signal peptidases I lysine active site. 145 157 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 JV59_36950 ae7c4136b5a9e05f5f1b0a1710ae8fe8 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 143 155 3.2E-27 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JV59_36950 ae7c4136b5a9e05f5f1b0a1710ae8fe8 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 95 3.2E-27 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JV59_36950 ae7c4136b5a9e05f5f1b0a1710ae8fe8 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 231 250 3.2E-27 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JV59_36950 ae7c4136b5a9e05f5f1b0a1710ae8fe8 298 ProSitePatterns PS00761 Signal peptidases I signature 3. 236 249 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 JV59_36950 ae7c4136b5a9e05f5f1b0a1710ae8fe8 298 Pfam PF00717 Peptidase S24-like 85 161 1.3E-21 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C JV59_36950 ae7c4136b5a9e05f5f1b0a1710ae8fe8 298 SUPERFAMILY SSF51306 77 296 4.24E-69 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily JV59_36950 ae7c4136b5a9e05f5f1b0a1710ae8fe8 298 Gene3D G3DSA:2.170.230.10 154 230 4.0E-74 T 14-10-2018 JV59_36950 ae7c4136b5a9e05f5f1b0a1710ae8fe8 298 Gene3D G3DSA:2.10.109.10 77 271 4.0E-74 T 14-10-2018 JV59_36950 ae7c4136b5a9e05f5f1b0a1710ae8fe8 298 ProSitePatterns PS00501 Signal peptidases I serine active site. 88 95 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 JV59_27105 25dd673d2c3ddc1bec15f056ce2e2b0e 210 Pfam PF04390 Lipopolysaccharide-assembly 47 161 9.7E-11 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 JV59_27105 25dd673d2c3ddc1bec15f056ce2e2b0e 210 Gene3D G3DSA:3.30.160.150 24 175 1.4E-48 T 14-10-2018 JV59_27105 25dd673d2c3ddc1bec15f056ce2e2b0e 210 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 9 166 24.429 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 JV59_23980 e19ae0e91face6f4d8ee71b9d9343e44 106 Pfam PF01906 Putative heavy-metal-binding 1 104 1.1E-36 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 JV59_23980 e19ae0e91face6f4d8ee71b9d9343e44 106 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 23.562 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 JV59_23980 e19ae0e91face6f4d8ee71b9d9343e44 106 SUPERFAMILY SSF117782 1 106 3.14E-37 T 14-10-2018 IPR035439 UPF0145 domain superfamily JV59_23980 e19ae0e91face6f4d8ee71b9d9343e44 106 Gene3D G3DSA:3.30.110.70 3 106 1.4E-41 T 14-10-2018 JV59_30150 694ca03647f3f69b810d1ee0d787cbed 229 Gene3D G3DSA:1.10.10.10 5 99 7.3E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_30150 694ca03647f3f69b810d1ee0d787cbed 229 SUPERFAMILY SSF46894 9 99 9.64E-12 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_30150 694ca03647f3f69b810d1ee0d787cbed 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 30 98 1.8E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_30150 694ca03647f3f69b810d1ee0d787cbed 229 SMART SM00862 25 98 3.0E-8 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_23510 cc224a25f2095f3ea953a22d817d92c1 123 Pfam PF12680 SnoaL-like domain 14 109 1.9E-9 T 14-10-2018 IPR037401 SnoaL-like domain JV59_23510 cc224a25f2095f3ea953a22d817d92c1 123 SUPERFAMILY SSF54427 1 117 1.63E-23 T 14-10-2018 IPR032710 NTF2-like domain superfamily JV59_23510 cc224a25f2095f3ea953a22d817d92c1 123 Gene3D G3DSA:3.10.450.50 3 119 1.6E-15 T 14-10-2018 JV59_32035 891bee148676c1a5bb4787c5fcf6e5ad 130 Gene3D G3DSA:3.40.50.300 3 127 3.2E-24 T 14-10-2018 JV59_32035 891bee148676c1a5bb4787c5fcf6e5ad 130 Pfam PF13671 AAA domain 5 101 6.2E-12 T 14-10-2018 JV59_32035 891bee148676c1a5bb4787c5fcf6e5ad 130 SUPERFAMILY SSF52540 5 103 1.18E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_20480 b53b4b10b6f5fa5f6cab1855acca59ee 377 SMART SM00382 29 220 4.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_20480 b53b4b10b6f5fa5f6cab1855acca59ee 377 Pfam PF00005 ABC transporter 21 162 1.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_20480 b53b4b10b6f5fa5f6cab1855acca59ee 377 SUPERFAMILY SSF50331 237 354 3.64E-27 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal JV59_20480 b53b4b10b6f5fa5f6cab1855acca59ee 377 Gene3D G3DSA:3.40.50.300 1 239 2.3E-74 T 14-10-2018 JV59_20480 b53b4b10b6f5fa5f6cab1855acca59ee 377 SUPERFAMILY SSF52540 4 243 9.66E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_20480 b53b4b10b6f5fa5f6cab1855acca59ee 377 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_20480 b53b4b10b6f5fa5f6cab1855acca59ee 377 Gene3D G3DSA:2.40.50.140 288 342 1.8E-27 T 14-10-2018 JV59_20480 b53b4b10b6f5fa5f6cab1855acca59ee 377 Gene3D G3DSA:2.40.50.100 241 359 1.8E-27 T 14-10-2018 JV59_20480 b53b4b10b6f5fa5f6cab1855acca59ee 377 Pfam PF08402 TOBE domain 281 350 1.7E-9 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 JV59_32705 8dd9e3c3f7b835c384d856de39ae5054 192 Gene3D G3DSA:2.30.110.10 2 127 1.0E-18 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JV59_32705 8dd9e3c3f7b835c384d856de39ae5054 192 SUPERFAMILY SSF50475 8 114 1.11E-10 T 14-10-2018 JV59_32705 8dd9e3c3f7b835c384d856de39ae5054 192 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 9 99 3.3E-7 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JV59_22365 a8fa27c2b47b7e0c3d0c5c32b72b9a23 289 Gene3D G3DSA:1.10.10.800 138 216 2.5E-54 T 14-10-2018 JV59_22365 a8fa27c2b47b7e0c3d0c5c32b72b9a23 289 Gene3D G3DSA:3.40.50.1820 12 270 2.5E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_22365 a8fa27c2b47b7e0c3d0c5c32b72b9a23 289 SUPERFAMILY SSF53474 11 288 1.8E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_22365 a8fa27c2b47b7e0c3d0c5c32b72b9a23 289 Pfam PF12146 Serine aminopeptidase, S33 47 147 1.7E-8 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 JV59_01555 5c3c29a0432e2126b861125e3ab3176b 818 Gene3D G3DSA:1.20.120.1080 370 467 1.2E-12 T 14-10-2018 JV59_01555 5c3c29a0432e2126b861125e3ab3176b 818 PIRSF PIRSF005496 1 818 0.0 T 14-10-2018 JV59_01555 5c3c29a0432e2126b861125e3ab3176b 818 Gene3D G3DSA:3.40.50.300 1 179 1.6E-51 T 14-10-2018 JV59_01555 5c3c29a0432e2126b861125e3ab3176b 818 SMART SM00487 2 186 1.8E-12 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JV59_01555 5c3c29a0432e2126b861125e3ab3176b 818 Gene3D G3DSA:3.40.50.300 180 345 6.5E-53 T 14-10-2018 JV59_01555 5c3c29a0432e2126b861125e3ab3176b 818 Pfam PF00271 Helicase conserved C-terminal domain 205 326 2.0E-14 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_01555 5c3c29a0432e2126b861125e3ab3176b 818 SMART SM00847 387 481 2.6E-8 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 JV59_01555 5c3c29a0432e2126b861125e3ab3176b 818 Pfam PF08482 ATP-dependent helicase C-terminal 672 804 3.2E-52 T 14-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal JV59_01555 5c3c29a0432e2126b861125e3ab3176b 818 SUPERFAMILY SSF52540 12 441 1.1E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_01555 5c3c29a0432e2126b861125e3ab3176b 818 Pfam PF04408 Helicase associated domain (HA2) 388 445 2.6E-10 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 JV59_01555 5c3c29a0432e2126b861125e3ab3176b 818 SMART SM00490 226 327 7.1E-19 T 14-10-2018 IPR001650 Helicase, C-terminal JV59_01555 5c3c29a0432e2126b861125e3ab3176b 818 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 816 0.0 T 14-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 JV59_01555 5c3c29a0432e2126b861125e3ab3176b 818 Pfam PF00270 DEAD/DEAH box helicase 17 164 7.0E-7 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JV59_29985 4c1ba0a7dd3b781fe967e4a08e1e5de2 127 Pfam PF14248 Domain of unknown function (DUF4345) 3 119 3.7E-15 T 14-10-2018 IPR025597 Protein of unknown function DUF4345 JV59_17240 d024c2d2c63010ae500659c26880ae7f 258 SUPERFAMILY SSF53850 29 256 1.18E-26 T 14-10-2018 JV59_17240 d024c2d2c63010ae500659c26880ae7f 258 Gene3D G3DSA:3.40.190.10 35 240 1.3E-20 T 14-10-2018 JV59_17240 d024c2d2c63010ae500659c26880ae7f 258 Gene3D G3DSA:3.40.190.10 115 211 1.3E-20 T 14-10-2018 JV59_17240 d024c2d2c63010ae500659c26880ae7f 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 240 4.3E-14 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_22595 d85c46b9c51e4fc98d53be54efe30436 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.4E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_22595 d85c46b9c51e4fc98d53be54efe30436 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.4E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_22595 d85c46b9c51e4fc98d53be54efe30436 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.4E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_22595 d85c46b9c51e4fc98d53be54efe30436 150 SUPERFAMILY SSF54909 64 149 1.74E-13 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_22595 d85c46b9c51e4fc98d53be54efe30436 150 Gene3D G3DSA:1.10.10.10 1 53 1.7E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_22595 d85c46b9c51e4fc98d53be54efe30436 150 SMART SM00344 1 110 5.2E-32 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 JV59_22595 d85c46b9c51e4fc98d53be54efe30436 150 Gene3D G3DSA:3.30.70.920 54 138 7.1E-16 T 14-10-2018 JV59_22595 d85c46b9c51e4fc98d53be54efe30436 150 SUPERFAMILY SSF46785 1 59 3.14E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_22595 d85c46b9c51e4fc98d53be54efe30436 150 Pfam PF01037 Lrp/AsnC ligand binding domain 67 139 7.0E-17 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JV59_22595 d85c46b9c51e4fc98d53be54efe30436 150 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 1.1E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_01695 5078725bccbad8b579450f238abc089b 395 SUPERFAMILY SSF52374 6 316 2.13E-98 T 14-10-2018 JV59_01695 5078725bccbad8b579450f238abc089b 395 Gene3D G3DSA:3.40.50.620 5 217 1.0E-72 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_01695 5078725bccbad8b579450f238abc089b 395 SMART SM00363 334 393 7.6E-4 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_01695 5078725bccbad8b579450f238abc089b 395 Gene3D G3DSA:1.10.240.10 218 325 6.9E-35 T 14-10-2018 JV59_01695 5078725bccbad8b579450f238abc089b 395 SUPERFAMILY SSF55174 320 394 2.16E-15 T 14-10-2018 JV59_01695 5078725bccbad8b579450f238abc089b 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 395 9.3E-127 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 JV59_01695 5078725bccbad8b579450f238abc089b 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.253 T 14-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 JV59_01695 5078725bccbad8b579450f238abc089b 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 316 1.2E-79 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_01695 5078725bccbad8b579450f238abc089b 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 2.7E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 JV59_01695 5078725bccbad8b579450f238abc089b 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 2.7E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 JV59_01695 5078725bccbad8b579450f238abc089b 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 2.7E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 JV59_01695 5078725bccbad8b579450f238abc089b 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 2.7E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 JV59_01695 5078725bccbad8b579450f238abc089b 395 Gene3D G3DSA:3.10.290.10 326 394 1.6E-14 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 JV59_01695 5078725bccbad8b579450f238abc089b 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_18680 0aecdc2d10e036dab7ec49c79310f5b3 155 Gene3D G3DSA:3.30.460.10 7 155 2.6E-20 T 14-10-2018 JV59_18680 0aecdc2d10e036dab7ec49c79310f5b3 155 SUPERFAMILY SSF81301 8 154 4.03E-29 T 14-10-2018 JV59_18680 0aecdc2d10e036dab7ec49c79310f5b3 155 Pfam PF04229 GrpB protein 8 154 9.8E-22 T 14-10-2018 IPR007344 GrpB/Dephospho-CoA kinase JV59_31150 4c81500e0cbffdfbd1e7002a105e17b5 89 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 6 84 5.8E-32 T 14-10-2018 IPR006306 Type III secretion protein HrpO GO:0009306|GO:0016021 JV59_31150 4c81500e0cbffdfbd1e7002a105e17b5 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 3.3E-26 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JV59_31150 4c81500e0cbffdfbd1e7002a105e17b5 89 PIRSF PIRSF004669 1 88 1.8E-26 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JV59_31150 4c81500e0cbffdfbd1e7002a105e17b5 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.2E-24 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JV59_31150 4c81500e0cbffdfbd1e7002a105e17b5 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.2E-24 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JV59_31150 4c81500e0cbffdfbd1e7002a105e17b5 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.2E-24 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JV59_01130 8d87ea02b474e7b2dfbec285346c1578 176 Pfam PF05068 Mannitol repressor 7 170 1.8E-60 T 14-10-2018 IPR007761 Mannitol repressor MtlR-like JV59_01130 8d87ea02b474e7b2dfbec285346c1578 176 SUPERFAMILY SSF158668 4 170 1.31E-57 T 14-10-2018 IPR038026 MtlR-like superfamily JV59_01130 8d87ea02b474e7b2dfbec285346c1578 176 Gene3D G3DSA:1.20.120.330 1 172 6.9E-70 T 14-10-2018 JV59_40150 b3c2fa4869f6ee6501e6de98215f158e 179 SUPERFAMILY SSF64288 8 174 2.54E-46 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JV59_40150 b3c2fa4869f6ee6501e6de98215f158e 179 Pfam PF04345 Chorismate lyase 12 178 1.6E-53 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 JV59_40150 b3c2fa4869f6ee6501e6de98215f158e 179 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 15 174 23.879 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 JV59_40150 b3c2fa4869f6ee6501e6de98215f158e 179 Gene3D G3DSA:3.40.1410.10 8 174 9.5E-41 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JV59_36635 1997a142b228127d2d99dbff5927a7d3 494 Pfam PF02554 Carbon starvation protein CstA 5 144 1.6E-33 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 JV59_36635 1997a142b228127d2d99dbff5927a7d3 494 Pfam PF02554 Carbon starvation protein CstA 156 293 4.4E-20 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 JV59_36635 1997a142b228127d2d99dbff5927a7d3 494 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 437 1.6E-21 T 14-10-2018 IPR025299 CstA, C-terminal domain JV59_35950 2de40f733993da9528586802ecd6d7ba 374 Gene3D G3DSA:3.20.20.70 68 338 1.3E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_35950 2de40f733993da9528586802ecd6d7ba 374 PIRSF PIRSF006004 3 366 5.8E-143 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 JV59_35950 2de40f733993da9528586802ecd6d7ba 374 Gene3D G3DSA:1.10.150.530 1 67 1.4E-25 T 14-10-2018 JV59_35950 2de40f733993da9528586802ecd6d7ba 374 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 359 4.0E-159 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 JV59_35950 2de40f733993da9528586802ecd6d7ba 374 SUPERFAMILY SSF102114 103 312 2.35E-13 T 14-10-2018 JV59_35950 2de40f733993da9528586802ecd6d7ba 374 Pfam PF04055 Radical SAM superfamily 109 283 4.2E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JV59_35950 2de40f733993da9528586802ecd6d7ba 374 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 71.658 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 JV59_40025 db5646191e3a128f01c584c96ef626bd 156 Gene3D G3DSA:3.10.590.10 1 153 1.1E-65 T 14-10-2018 JV59_40025 db5646191e3a128f01c584c96ef626bd 156 SUPERFAMILY SSF88697 1 149 3.05E-62 T 14-10-2018 IPR015947 PUA-like superfamily JV59_40025 db5646191e3a128f01c584c96ef626bd 156 Pfam PF01878 EVE domain 2 148 2.7E-56 T 14-10-2018 IPR002740 EVE domain JV59_00095 c2b16d4a25cceaf8b70c101b907d6095 500 Gene3D G3DSA:3.40.50.300 8 168 3.4E-6 T 14-10-2018 JV59_00095 c2b16d4a25cceaf8b70c101b907d6095 500 Pfam PF05036 Sporulation related domain 413 486 2.9E-6 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 JV59_00095 c2b16d4a25cceaf8b70c101b907d6095 500 SUPERFAMILY SSF52540 24 191 8.1E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_00095 c2b16d4a25cceaf8b70c101b907d6095 500 Pfam PF13401 AAA domain 32 130 2.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_00095 c2b16d4a25cceaf8b70c101b907d6095 500 Gene3D G3DSA:3.30.70.1070 399 497 2.3E-25 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 JV59_28630 5a7b019700996c09618850983ccb1bb5 357 Gene3D G3DSA:3.30.1150.10 255 356 8.5E-27 T 14-10-2018 JV59_28630 5a7b019700996c09618850983ccb1bb5 357 Pfam PF06519 TolA C-terminal 256 353 2.3E-30 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 JV59_28630 5a7b019700996c09618850983ccb1bb5 357 SUPERFAMILY SSF74653 264 356 1.96E-15 T 14-10-2018 JV59_28630 5a7b019700996c09618850983ccb1bb5 357 TIGRFAM TIGR02794 tolA_full: protein TolA 14 355 5.5E-89 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 JV59_30350 df109ce2c81c740bc8f0e557d3ea04a5 130 Gene3D G3DSA:3.40.50.300 16 124 2.2E-10 T 14-10-2018 JV59_30350 df109ce2c81c740bc8f0e557d3ea04a5 130 Pfam PF03846 Cell division inhibitor SulA 19 97 4.5E-5 T 14-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 JV59_30350 df109ce2c81c740bc8f0e557d3ea04a5 130 SUPERFAMILY SSF52540 24 109 6.37E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_32755 9cfca421e3ac9368c07af67d9ca36466 136 Pfam PF13508 Acetyltransferase (GNAT) domain 55 119 2.6E-11 T 14-10-2018 IPR000182 GNAT domain JV59_32755 9cfca421e3ac9368c07af67d9ca36466 136 SUPERFAMILY SSF55729 13 122 1.17E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_32755 9cfca421e3ac9368c07af67d9ca36466 136 Gene3D G3DSA:3.40.630.30 4 132 1.9E-30 T 14-10-2018 JV59_21820 0bfb85108b1b43ce3301bb55f257c641 387 Gene3D G3DSA:3.40.50.300 129 374 1.5E-31 T 14-10-2018 JV59_21820 0bfb85108b1b43ce3301bb55f257c641 387 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 132 201 8.3E-8 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 JV59_21820 0bfb85108b1b43ce3301bb55f257c641 387 SUPERFAMILY SSF52540 130 374 1.9E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_21820 0bfb85108b1b43ce3301bb55f257c641 387 Gene3D G3DSA:3.40.50.2300 54 119 1.1E-7 T 14-10-2018 JV59_26320 ad3ab874ce1bbacfc18a839c04fb607d 545 Pfam PF07655 Secretin N-terminal domain 144 237 1.6E-24 T 14-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 JV59_26320 ad3ab874ce1bbacfc18a839c04fb607d 545 SMART SM00965 92 140 1.2E-5 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 JV59_26320 ad3ab874ce1bbacfc18a839c04fb607d 545 Gene3D G3DSA:3.55.50.30 59 144 1.5E-9 T 14-10-2018 JV59_26320 ad3ab874ce1bbacfc18a839c04fb607d 545 PRINTS PR00811 Bacterial general secretion pathway protein D signature 486 504 1.2E-17 T 14-10-2018 IPR001775 GspD/PilQ family JV59_26320 ad3ab874ce1bbacfc18a839c04fb607d 545 PRINTS PR00811 Bacterial general secretion pathway protein D signature 266 276 1.2E-17 T 14-10-2018 IPR001775 GspD/PilQ family JV59_26320 ad3ab874ce1bbacfc18a839c04fb607d 545 PRINTS PR00811 Bacterial general secretion pathway protein D signature 340 364 1.2E-17 T 14-10-2018 IPR001775 GspD/PilQ family JV59_26320 ad3ab874ce1bbacfc18a839c04fb607d 545 PRINTS PR00811 Bacterial general secretion pathway protein D signature 509 523 1.2E-17 T 14-10-2018 IPR001775 GspD/PilQ family JV59_26320 ad3ab874ce1bbacfc18a839c04fb607d 545 Pfam PF00263 Bacterial type II and III secretion system protein 345 521 4.6E-42 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 JV59_26320 ad3ab874ce1bbacfc18a839c04fb607d 545 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 232 521 1.9E-98 T 14-10-2018 IPR013358 Pilus biogenesis, MshL JV59_33200 8f6c23fd7f6feb86e49e714c88cea8bf 266 SUPERFAMILY SSF54506 1 266 5.66E-71 T 14-10-2018 JV59_33200 8f6c23fd7f6feb86e49e714c88cea8bf 266 Gene3D G3DSA:3.10.310.10 6 261 3.5E-83 T 14-10-2018 JV59_33200 8f6c23fd7f6feb86e49e714c88cea8bf 266 Gene3D G3DSA:3.10.310.10 116 254 3.5E-83 T 14-10-2018 JV59_33200 8f6c23fd7f6feb86e49e714c88cea8bf 266 PIRSF PIRSF016184 1 266 1.6E-53 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 JV59_33200 8f6c23fd7f6feb86e49e714c88cea8bf 266 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 261 1.7E-42 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 JV59_33200 8f6c23fd7f6feb86e49e714c88cea8bf 266 Pfam PF02567 Phenazine biosynthesis-like protein 8 259 2.4E-62 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 JV59_39235 27f3fa8ec8332a1edff8c191b6414aac 366 Gene3D G3DSA:3.10.150.10 248 366 1.5E-38 T 14-10-2018 JV59_39235 27f3fa8ec8332a1edff8c191b6414aac 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 6.1E-35 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 JV59_39235 27f3fa8ec8332a1edff8c191b6414aac 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 3.7E-108 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 JV59_39235 27f3fa8ec8332a1edff8c191b6414aac 366 PIRSF PIRSF000804 1 366 9.0E-117 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 JV59_39235 27f3fa8ec8332a1edff8c191b6414aac 366 Gene3D G3DSA:3.10.150.10 124 247 6.2E-36 T 14-10-2018 JV59_39235 27f3fa8ec8332a1edff8c191b6414aac 366 SMART SM00480 17 362 1.2E-143 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 JV59_39235 27f3fa8ec8332a1edff8c191b6414aac 366 SUPERFAMILY SSF55979 1 118 5.14E-31 T 14-10-2018 JV59_39235 27f3fa8ec8332a1edff8c191b6414aac 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 5.0E-38 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 JV59_39235 27f3fa8ec8332a1edff8c191b6414aac 366 Gene3D G3DSA:3.10.150.10 1 122 8.2E-43 T 14-10-2018 JV59_39235 27f3fa8ec8332a1edff8c191b6414aac 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 1.5E-39 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 JV59_39235 27f3fa8ec8332a1edff8c191b6414aac 366 SUPERFAMILY SSF55979 245 366 7.14E-36 T 14-10-2018 JV59_39235 27f3fa8ec8332a1edff8c191b6414aac 366 SUPERFAMILY SSF55979 126 244 8.79E-29 T 14-10-2018 JV59_22465 511c4c1aabfc45ee4dd07469cf868d6a 212 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 118 146 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 JV59_22465 511c4c1aabfc45ee4dd07469cf868d6a 212 Gene3D G3DSA:2.160.10.10 2 210 1.6E-58 T 14-10-2018 JV59_22465 511c4c1aabfc45ee4dd07469cf868d6a 212 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 1.9E-11 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_22465 511c4c1aabfc45ee4dd07469cf868d6a 212 SUPERFAMILY SSF51161 49 201 1.52E-40 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JV59_39355 9da45de72b4fcaa15d44b3451b9d2bf8 246 Gene3D G3DSA:1.10.3720.10 33 242 6.3E-58 T 14-10-2018 IPR035906 MetI-like superfamily JV59_39355 9da45de72b4fcaa15d44b3451b9d2bf8 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 242 3.0E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_39355 9da45de72b4fcaa15d44b3451b9d2bf8 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 38 136 7.9E-31 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 JV59_39355 9da45de72b4fcaa15d44b3451b9d2bf8 246 SUPERFAMILY SSF161098 42 227 7.46E-48 T 14-10-2018 IPR035906 MetI-like superfamily JV59_30085 22ffc5909438b1282a122fc7b23c259e 288 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 34.793 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JV59_30085 22ffc5909438b1282a122fc7b23c259e 288 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 282 1.0E-125 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JV59_30085 22ffc5909438b1282a122fc7b23c259e 288 Pfam PF01039 Carboxyl transferase domain 97 240 2.8E-13 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 JV59_30085 22ffc5909438b1282a122fc7b23c259e 288 Gene3D G3DSA:3.90.226.10 25 285 3.5E-79 T 14-10-2018 JV59_30085 22ffc5909438b1282a122fc7b23c259e 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 8.5E-35 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JV59_30085 22ffc5909438b1282a122fc7b23c259e 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 8.5E-35 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JV59_30085 22ffc5909438b1282a122fc7b23c259e 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 8.5E-35 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JV59_30085 22ffc5909438b1282a122fc7b23c259e 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 8.5E-35 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JV59_30085 22ffc5909438b1282a122fc7b23c259e 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 8.5E-35 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JV59_30085 22ffc5909438b1282a122fc7b23c259e 288 SUPERFAMILY SSF52096 25 283 9.29E-80 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JV59_25390 a3798422c6ca2659af4f3163f076385f 196 SUPERFAMILY SSF51206 10 139 3.14E-16 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JV59_25390 a3798422c6ca2659af4f3163f076385f 196 Gene3D G3DSA:2.60.120.10 4 145 4.7E-19 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_20140 be173d24024ff10d0e52a1070c510bca 450 SUPERFAMILY SSF51011 385 447 5.14E-6 T 14-10-2018 JV59_20140 be173d24024ff10d0e52a1070c510bca 450 PRINTS PR00110 Alpha-amylase signature 228 246 5.2E-14 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 JV59_20140 be173d24024ff10d0e52a1070c510bca 450 PRINTS PR00110 Alpha-amylase signature 294 306 5.2E-14 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 JV59_20140 be173d24024ff10d0e52a1070c510bca 450 PRINTS PR00110 Alpha-amylase signature 86 97 5.2E-14 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 JV59_20140 be173d24024ff10d0e52a1070c510bca 450 PRINTS PR00110 Alpha-amylase signature 53 70 5.2E-14 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 JV59_20140 be173d24024ff10d0e52a1070c510bca 450 PRINTS PR00110 Alpha-amylase signature 199 210 5.2E-14 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 JV59_20140 be173d24024ff10d0e52a1070c510bca 450 SMART SM00642 8 372 1.4E-20 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_20140 be173d24024ff10d0e52a1070c510bca 450 SUPERFAMILY SSF51445 8 342 1.73E-54 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_20140 be173d24024ff10d0e52a1070c510bca 450 Pfam PF00128 Alpha amylase, catalytic domain 32 230 1.4E-15 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_20140 be173d24024ff10d0e52a1070c510bca 450 Gene3D G3DSA:3.20.20.80 5 374 6.3E-74 T 14-10-2018 JV59_20140 be173d24024ff10d0e52a1070c510bca 450 Gene3D G3DSA:2.60.40.1180 375 448 3.3E-5 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta JV59_19415 6de58573eaf274fa0f36cb47f471427b 510 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 390 495 8.6E-14 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JV59_19415 6de58573eaf274fa0f36cb47f471427b 510 Gene3D G3DSA:1.10.8.870 402 478 1.2E-18 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JV59_19415 6de58573eaf274fa0f36cb47f471427b 510 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 20 37 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JV59_19415 6de58573eaf274fa0f36cb47f471427b 510 Pfam PF01266 FAD dependent oxidoreductase 16 368 1.6E-46 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JV59_19415 6de58573eaf274fa0f36cb47f471427b 510 SUPERFAMILY SSF51905 16 290 1.22E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_19415 6de58573eaf274fa0f36cb47f471427b 510 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 89 101 2.1E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JV59_19415 6de58573eaf274fa0f36cb47f471427b 510 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 15 27 2.1E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JV59_19415 6de58573eaf274fa0f36cb47f471427b 510 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 28 38 2.1E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JV59_19415 6de58573eaf274fa0f36cb47f471427b 510 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 324 330 2.1E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JV59_19415 6de58573eaf274fa0f36cb47f471427b 510 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 358 370 2.1E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JV59_19415 6de58573eaf274fa0f36cb47f471427b 510 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 44 56 2.1E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JV59_19415 6de58573eaf274fa0f36cb47f471427b 510 Gene3D G3DSA:3.30.9.10 93 331 5.1E-138 T 14-10-2018 JV59_19415 6de58573eaf274fa0f36cb47f471427b 510 Gene3D G3DSA:3.50.50.60 16 377 5.1E-138 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_16510 a8d71da83e6866380566952770ab03ce 243 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 59 229 3.3E-48 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 JV59_16510 a8d71da83e6866380566952770ab03ce 243 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 60 225 1.7E-62 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 JV59_20740 27fac80dd7de3ff662f03fbc7ff5c6d7 257 SUPERFAMILY SSF53850 22 243 1.19E-31 T 14-10-2018 JV59_20740 27fac80dd7de3ff662f03fbc7ff5c6d7 257 Gene3D G3DSA:3.40.190.10 50 242 6.3E-18 T 14-10-2018 JV59_20740 27fac80dd7de3ff662f03fbc7ff5c6d7 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 50 243 3.3E-13 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_20740 27fac80dd7de3ff662f03fbc7ff5c6d7 257 Gene3D G3DSA:3.40.190.10 107 206 6.3E-18 T 14-10-2018 JV59_25335 721f9244b3c92ed45dc5ce2fe2fe6481 547 SUPERFAMILY SSF52540 196 454 3.3E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_25335 721f9244b3c92ed45dc5ce2fe2fe6481 547 Pfam PF07728 AAA domain (dynein-related subfamily) 221 443 6.8E-10 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 JV59_37990 cba12f89309d34785b83ccd72d5a2c8c 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 1.2E-27 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 JV59_37990 cba12f89309d34785b83ccd72d5a2c8c 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 1.2E-27 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 JV59_37990 cba12f89309d34785b83ccd72d5a2c8c 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 1.2E-27 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 JV59_37990 cba12f89309d34785b83ccd72d5a2c8c 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 1.2E-27 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 JV59_37990 cba12f89309d34785b83ccd72d5a2c8c 289 SUPERFAMILY SSF52540 4 286 1.0E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_37990 cba12f89309d34785b83ccd72d5a2c8c 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 4.4E-71 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 JV59_37990 cba12f89309d34785b83ccd72d5a2c8c 289 Gene3D G3DSA:3.40.50.300 1 289 1.3E-111 T 14-10-2018 JV59_21735 65b824031d4d37b14026be6af5b0d614 273 Gene3D G3DSA:3.40.190.10 100 233 1.1E-82 T 14-10-2018 JV59_21735 65b824031d4d37b14026be6af5b0d614 273 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 16 271 3.7E-76 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 JV59_21735 65b824031d4d37b14026be6af5b0d614 273 Pfam PF12849 PBP superfamily domain 22 259 6.0E-41 T 14-10-2018 IPR024370 PBP domain JV59_21735 65b824031d4d37b14026be6af5b0d614 273 Gene3D G3DSA:3.40.190.10 30 264 1.1E-82 T 14-10-2018 JV59_21735 65b824031d4d37b14026be6af5b0d614 273 SUPERFAMILY SSF53850 25 272 7.53E-71 T 14-10-2018 JV59_27905 13dcc63234cdc18429c217edce3c70e0 151 Gene3D G3DSA:3.90.1170.40 2 149 9.6E-56 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 JV59_27905 13dcc63234cdc18429c217edce3c70e0 151 SUPERFAMILY SSF54690 4 149 6.02E-57 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 JV59_27905 13dcc63234cdc18429c217edce3c70e0 151 Pfam PF02391 MoaE protein 10 119 2.1E-38 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 JV59_32135 b7bc0540360309e9c9f6863f223958f4 596 Pfam PF08439 Oligopeptidase F 107 173 2.8E-8 T 14-10-2018 IPR013647 Oligopeptidase F, N-terminal domain JV59_32135 b7bc0540360309e9c9f6863f223958f4 596 Pfam PF01432 Peptidase family M3 336 576 1.2E-21 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 JV59_32135 b7bc0540360309e9c9f6863f223958f4 596 SUPERFAMILY SSF55486 6 575 6.59E-87 T 14-10-2018 JV59_32135 b7bc0540360309e9c9f6863f223958f4 596 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 5 592 3.1E-197 T 14-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 JV59_32135 b7bc0540360309e9c9f6863f223958f4 596 Gene3D G3DSA:1.20.140.70 18 160 8.6E-8 T 14-10-2018 JV59_32135 b7bc0540360309e9c9f6863f223958f4 596 Gene3D G3DSA:1.10.1370.20 217 596 3.5E-107 T 14-10-2018 JV59_31370 0ad4c6ebaa5996729d6f4cb7c7509d6a 149 SUPERFAMILY SSF69635 15 141 6.04E-25 T 14-10-2018 JV59_31370 0ad4c6ebaa5996729d6f4cb7c7509d6a 149 Gene3D G3DSA:3.30.1460.10 14 146 2.5E-29 T 14-10-2018 JV59_31370 0ad4c6ebaa5996729d6f4cb7c7509d6a 149 Pfam PF03519 Invasion protein B family 30 104 1.1E-7 T 14-10-2018 IPR003065 Surface presentation of antigens protein SpaK JV59_16120 1dd10daff0da3eceb2d19bdfe43cbec7 550 SUPERFAMILY SSF53649 220 470 3.92E-11 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 JV59_16120 1dd10daff0da3eceb2d19bdfe43cbec7 550 Pfam PF00884 Sulfatase 220 474 1.3E-18 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 JV59_16120 1dd10daff0da3eceb2d19bdfe43cbec7 550 Gene3D G3DSA:3.40.720.10 214 516 1.7E-36 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 JV59_26550 82b2ecb72009aa2f24cf802a13d14316 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.588 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26550 82b2ecb72009aa2f24cf802a13d14316 71 Pfam PF01165 Ribosomal protein S21 4 56 4.3E-23 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26550 82b2ecb72009aa2f24cf802a13d14316 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26550 82b2ecb72009aa2f24cf802a13d14316 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26550 82b2ecb72009aa2f24cf802a13d14316 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.2E-25 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26550 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26550 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26550 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26550 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26550 82b2ecb72009aa2f24cf802a13d14316 71 Gene3D G3DSA:1.20.5.1150 16 54 1.4E-21 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_24570 988a4cfeb1556885db0670268da783d5 116 SUPERFAMILY SSF55298 18 115 3.03E-19 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_24570 988a4cfeb1556885db0670268da783d5 116 Pfam PF01042 Endoribonuclease L-PSP 32 114 2.2E-13 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 JV59_24570 988a4cfeb1556885db0670268da783d5 116 Gene3D G3DSA:3.30.1330.40 9 116 9.7E-23 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_39365 07f742c3ddb05a6799d2a557ef497b6b 399 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 369 5.6E-83 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 JV59_39365 07f742c3ddb05a6799d2a557ef497b6b 399 Pfam PF07690 Major Facilitator Superfamily 13 339 3.3E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_39365 07f742c3ddb05a6799d2a557ef497b6b 399 Gene3D G3DSA:1.20.1720.10 8 377 8.9E-74 T 14-10-2018 JV59_39365 07f742c3ddb05a6799d2a557ef497b6b 399 SUPERFAMILY SSF103473 4 375 2.35E-50 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_22825 ee6c23aeb7df41c8e625c86a6346d938 122 SUPERFAMILY SSF54593 1 118 3.58E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_22825 ee6c23aeb7df41c8e625c86a6346d938 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 118 8.8E-10 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JV59_22825 ee6c23aeb7df41c8e625c86a6346d938 122 Gene3D G3DSA:3.10.180.10 6 121 1.6E-32 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_30890 0598f03f9d75a67c4ff24860924122d2 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.7E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_30890 0598f03f9d75a67c4ff24860924122d2 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.7E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_30890 0598f03f9d75a67c4ff24860924122d2 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.7E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_30890 0598f03f9d75a67c4ff24860924122d2 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.7E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_30890 0598f03f9d75a67c4ff24860924122d2 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.7E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_30890 0598f03f9d75a67c4ff24860924122d2 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.7E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_30890 0598f03f9d75a67c4ff24860924122d2 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 243 3.2E-63 T 14-10-2018 JV59_30890 0598f03f9d75a67c4ff24860924122d2 255 SUPERFAMILY SSF51735 5 244 1.38E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_30890 0598f03f9d75a67c4ff24860924122d2 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JV59_30890 0598f03f9d75a67c4ff24860924122d2 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 2.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_30890 0598f03f9d75a67c4ff24860924122d2 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 2.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_30890 0598f03f9d75a67c4ff24860924122d2 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_30890 0598f03f9d75a67c4ff24860924122d2 255 Gene3D G3DSA:3.40.50.720 1 251 5.2E-73 T 14-10-2018 JV59_25440 da5654341a0c9f120a30d94b866a0101 350 SUPERFAMILY SSF109604 90 312 8.79E-37 T 14-10-2018 JV59_25440 da5654341a0c9f120a30d94b866a0101 350 Pfam PF08668 HDOD domain 92 283 4.4E-28 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD JV59_25440 da5654341a0c9f120a30d94b866a0101 350 Gene3D G3DSA:1.10.3210.10 88 342 9.7E-34 T 14-10-2018 JV59_24115 ca1066566ea52928c4cae77f2c885abf 325 SUPERFAMILY SSF55909 19 313 3.07E-37 T 14-10-2018 JV59_24115 ca1066566ea52928c4cae77f2c885abf 325 PIRSF PIRSF028188 3 321 4.2E-150 T 14-10-2018 IPR014541 Predicted amidinotransferase, FN0238 type JV59_24115 ca1066566ea52928c4cae77f2c885abf 325 Gene3D G3DSA:3.75.10.10 9 313 4.4E-45 T 14-10-2018 JV59_24115 ca1066566ea52928c4cae77f2c885abf 325 Pfam PF02274 Amidinotransferase 23 318 6.3E-61 T 14-10-2018 JV59_31525 d70e9dcec26791f26e3b3b69b0e4f11b 85 SUPERFAMILY SSF47413 7 59 1.09E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_31525 d70e9dcec26791f26e3b3b69b0e4f11b 85 Gene3D G3DSA:1.10.260.40 3 59 3.5E-6 T 14-10-2018 JV59_22795 6c2dd60f9dbfb917a1c7a5a68462339a 130 Gene3D G3DSA:3.30.1330.40 16 129 3.2E-31 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_22795 6c2dd60f9dbfb917a1c7a5a68462339a 130 Pfam PF01042 Endoribonuclease L-PSP 20 123 5.2E-22 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 JV59_22795 6c2dd60f9dbfb917a1c7a5a68462339a 130 SUPERFAMILY SSF55298 18 127 1.73E-30 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_37020 f747e17b2da1048a75beec40d26ae183 191 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 189 32.027 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 JV59_37020 f747e17b2da1048a75beec40d26ae183 191 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 14 176 7.1E-11 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 JV59_37020 f747e17b2da1048a75beec40d26ae183 191 Gene3D G3DSA:1.20.120.740 4 191 1.9E-48 T 14-10-2018 JV59_37020 f747e17b2da1048a75beec40d26ae183 191 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 179 2.7E-36 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 JV59_37020 f747e17b2da1048a75beec40d26ae183 191 SUPERFAMILY SSF101327 7 178 3.14E-44 T 14-10-2018 IPR036255 YgfB-like superfamily JV59_28165 7ed6bf91f7030dc0f1c466328df2783d 212 Pfam PF01914 MarC family integral membrane protein 8 208 1.6E-63 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 JV59_28165 7ed6bf91f7030dc0f1c466328df2783d 212 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 204 1.2E-65 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 JV59_25885 62fc001044a7b3e88d291e9475d49ddf 98 SUPERFAMILY SSF54909 1 70 1.9E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_25885 62fc001044a7b3e88d291e9475d49ddf 98 Gene3D G3DSA:3.30.70.100 3 96 1.6E-10 T 14-10-2018 JV59_25885 62fc001044a7b3e88d291e9475d49ddf 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 64 4.1E-11 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain JV59_33740 1d55e9c46c9b819c415b1cdee5e9eb8a 88 SUPERFAMILY SSF52833 3 81 3.05E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_33740 1d55e9c46c9b819c415b1cdee5e9eb8a 88 PRINTS PR00160 Glutaredoxin signature 3 21 7.6E-12 T 14-10-2018 IPR014025 Glutaredoxin subgroup JV59_33740 1d55e9c46c9b819c415b1cdee5e9eb8a 88 PRINTS PR00160 Glutaredoxin signature 66 79 7.6E-12 T 14-10-2018 IPR014025 Glutaredoxin subgroup JV59_33740 1d55e9c46c9b819c415b1cdee5e9eb8a 88 PRINTS PR00160 Glutaredoxin signature 52 65 7.6E-12 T 14-10-2018 IPR014025 Glutaredoxin subgroup JV59_33740 1d55e9c46c9b819c415b1cdee5e9eb8a 88 Pfam PF00462 Glutaredoxin 3 69 5.1E-16 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 JV59_33740 1d55e9c46c9b819c415b1cdee5e9eb8a 88 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 2.2E-47 T 14-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 JV59_33740 1d55e9c46c9b819c415b1cdee5e9eb8a 88 Gene3D G3DSA:3.40.30.10 1 84 1.5E-25 T 14-10-2018 JV59_17210 ebf046ee3f94f77b463758fe85e4526f 135 Gene3D G3DSA:3.10.180.10 8 131 3.0E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_17210 ebf046ee3f94f77b463758fe85e4526f 135 SUPERFAMILY SSF54593 5 129 1.1E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_17210 ebf046ee3f94f77b463758fe85e4526f 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 129 1.1E-8 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JV59_39655 42c3d73ddb743380d7a7cd10f880d822 212 Gene3D G3DSA:3.40.50.150 3 108 3.7E-6 T 14-10-2018 JV59_39655 42c3d73ddb743380d7a7cd10f880d822 212 Pfam PF13489 Methyltransferase domain 64 196 1.3E-17 T 14-10-2018 JV59_39655 42c3d73ddb743380d7a7cd10f880d822 212 Gene3D G3DSA:3.40.50.150 109 204 1.6E-10 T 14-10-2018 JV59_39655 42c3d73ddb743380d7a7cd10f880d822 212 SUPERFAMILY SSF53335 48 198 5.96E-22 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_18595 6b08c5f210cd3399250d95194847652e 827 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 551 612 1.4E-10 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_18595 6b08c5f210cd3399250d95194847652e 827 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 623 761 5.2E-19 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_18595 6b08c5f210cd3399250d95194847652e 827 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 670 686 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_18595 6b08c5f210cd3399250d95194847652e 827 PRINTS PR00397 Sirohaem Fe-binding site signature 670 688 8.5E-7 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_18595 6b08c5f210cd3399250d95194847652e 827 PRINTS PR00397 Sirohaem Fe-binding site signature 627 645 8.5E-7 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_18595 6b08c5f210cd3399250d95194847652e 827 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 6.1E-10 T 14-10-2018 JV59_18595 6b08c5f210cd3399250d95194847652e 827 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 6.1E-10 T 14-10-2018 JV59_18595 6b08c5f210cd3399250d95194847652e 827 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 232 246 6.1E-10 T 14-10-2018 JV59_18595 6b08c5f210cd3399250d95194847652e 827 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 6.1E-10 T 14-10-2018 JV59_18595 6b08c5f210cd3399250d95194847652e 827 PIRSF PIRSF037149 1 826 0.0 T 14-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 JV59_18595 6b08c5f210cd3399250d95194847652e 827 SUPERFAMILY SSF51905 3 188 1.05E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_18595 6b08c5f210cd3399250d95194847652e 827 Gene3D G3DSA:3.50.50.60 5 280 1.7E-83 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_18595 6b08c5f210cd3399250d95194847652e 827 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 4 792 0.0 T 14-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 JV59_18595 6b08c5f210cd3399250d95194847652e 827 SUPERFAMILY SSF56014 624 795 5.1E-51 T 14-10-2018 JV59_18595 6b08c5f210cd3399250d95194847652e 827 Gene3D G3DSA:3.30.413.10 622 781 2.3E-35 T 14-10-2018 JV59_18595 6b08c5f210cd3399250d95194847652e 827 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 9.5E-16 T 14-10-2018 JV59_18595 6b08c5f210cd3399250d95194847652e 827 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 9.5E-16 T 14-10-2018 JV59_18595 6b08c5f210cd3399250d95194847652e 827 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 9.5E-16 T 14-10-2018 JV59_18595 6b08c5f210cd3399250d95194847652e 827 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 9.5E-16 T 14-10-2018 JV59_18595 6b08c5f210cd3399250d95194847652e 827 Pfam PF04324 BFD-like [2Fe-2S] binding domain 414 462 1.4E-14 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain JV59_18595 6b08c5f210cd3399250d95194847652e 827 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 284 2.2E-52 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JV59_18595 6b08c5f210cd3399250d95194847652e 827 SUPERFAMILY SSF55124 493 632 4.42E-26 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JV59_18595 6b08c5f210cd3399250d95194847652e 827 Gene3D G3DSA:1.10.10.1100 413 468 2.9E-12 T 14-10-2018 JV59_18595 6b08c5f210cd3399250d95194847652e 827 SUPERFAMILY SSF51905 146 306 7.21E-24 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_18595 6b08c5f210cd3399250d95194847652e 827 Gene3D G3DSA:3.50.50.60 108 243 1.7E-83 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_36530 4fd2a4a0eee0cdebbd4893713d9f355d 109 SUPERFAMILY SSF69754 1 102 2.35E-29 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like JV59_36530 4fd2a4a0eee0cdebbd4893713d9f355d 109 Gene3D G3DSA:3.30.160.100 1 107 5.6E-32 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like JV59_36530 4fd2a4a0eee0cdebbd4893713d9f355d 109 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 100 1.8E-29 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 JV59_36530 4fd2a4a0eee0cdebbd4893713d9f355d 109 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 5.3E-22 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 JV59_24610 1d9fb3ea8b49627e61de31884db1c7a6 138 Gene3D G3DSA:2.170.150.70 5 115 4.0E-13 T 14-10-2018 JV59_24610 1d9fb3ea8b49627e61de31884db1c7a6 138 SUPERFAMILY SSF51316 5 126 1.36E-33 T 14-10-2018 IPR011057 Mss4-like superfamily JV59_24610 1d9fb3ea8b49627e61de31884db1c7a6 138 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 109 7.0E-14 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 JV59_29770 fc843de8312f9c5681a10fdda20e0ccf 240 Gene3D G3DSA:3.40.50.1820 2 235 2.2E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_29770 fc843de8312f9c5681a10fdda20e0ccf 240 PRINTS PR00111 Alpha/beta hydrolase fold signature 61 74 5.6E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_29770 fc843de8312f9c5681a10fdda20e0ccf 240 PRINTS PR00111 Alpha/beta hydrolase fold signature 178 192 5.6E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_29770 fc843de8312f9c5681a10fdda20e0ccf 240 PRINTS PR00111 Alpha/beta hydrolase fold signature 75 88 5.6E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_29770 fc843de8312f9c5681a10fdda20e0ccf 240 Pfam PF12697 Alpha/beta hydrolase family 45 226 2.6E-13 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_29770 fc843de8312f9c5681a10fdda20e0ccf 240 SUPERFAMILY SSF53474 6 232 7.77E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_23055 7d4c0bad416979c205eb0fb2b7ee368d 415 Pfam PF00069 Protein kinase domain 204 368 6.8E-18 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JV59_23055 7d4c0bad416979c205eb0fb2b7ee368d 415 Gene3D G3DSA:3.80.10.10 101 191 2.6E-18 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JV59_23055 7d4c0bad416979c205eb0fb2b7ee368d 415 Gene3D G3DSA:3.80.10.10 5 100 2.8E-14 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JV59_23055 7d4c0bad416979c205eb0fb2b7ee368d 415 SUPERFAMILY SSF52058 11 191 5.27E-31 T 14-10-2018 JV59_23055 7d4c0bad416979c205eb0fb2b7ee368d 415 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 209 236 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 JV59_23055 7d4c0bad416979c205eb0fb2b7ee368d 415 Gene3D G3DSA:3.30.200.20 192 284 2.0E-8 T 14-10-2018 JV59_23055 7d4c0bad416979c205eb0fb2b7ee368d 415 SMART SM00364 126 145 170.0 T 14-10-2018 JV59_23055 7d4c0bad416979c205eb0fb2b7ee368d 415 SMART SM00364 35 54 0.27 T 14-10-2018 JV59_23055 7d4c0bad416979c205eb0fb2b7ee368d 415 SMART SM00364 58 77 78.0 T 14-10-2018 JV59_23055 7d4c0bad416979c205eb0fb2b7ee368d 415 SMART SM00364 103 122 3.6 T 14-10-2018 JV59_23055 7d4c0bad416979c205eb0fb2b7ee368d 415 Pfam PF13855 Leucine rich repeat 127 184 7.4E-7 T 14-10-2018 IPR001611 Leucine-rich repeat GO:0005515 JV59_23055 7d4c0bad416979c205eb0fb2b7ee368d 415 SMART SM00369 12 34 380.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype JV59_23055 7d4c0bad416979c205eb0fb2b7ee368d 415 SMART SM00369 127 148 49.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype JV59_23055 7d4c0bad416979c205eb0fb2b7ee368d 415 SMART SM00369 149 172 34.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype JV59_23055 7d4c0bad416979c205eb0fb2b7ee368d 415 SMART SM00369 104 126 33.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype JV59_23055 7d4c0bad416979c205eb0fb2b7ee368d 415 SMART SM00369 58 81 13.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype JV59_23055 7d4c0bad416979c205eb0fb2b7ee368d 415 SUPERFAMILY SSF56112 198 368 3.78E-24 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily JV59_23055 7d4c0bad416979c205eb0fb2b7ee368d 415 Gene3D G3DSA:1.10.510.10 303 407 7.1E-11 T 14-10-2018 JV59_37905 bdb353ec8759fe949bf708309f77caba 200 SUPERFAMILY SSF52166 9 199 7.98E-73 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 JV59_37905 bdb353ec8759fe949bf708309f77caba 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 200 33.806 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37905 bdb353ec8759fe949bf708309f77caba 200 Gene3D G3DSA:3.40.1370.10 5 200 9.7E-70 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 JV59_37905 bdb353ec8759fe949bf708309f77caba 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 4.2E-65 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 JV59_37905 bdb353ec8759fe949bf708309f77caba 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 4.9E-76 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_27350 df936e4b1d17b25d39daec793ded1797 308 SUPERFAMILY SSF52172 183 306 4.41E-25 T 14-10-2018 IPR011006 CheY-like superfamily JV59_27350 df936e4b1d17b25d39daec793ded1797 308 Gene3D G3DSA:3.40.50.2300 169 308 1.4E-24 T 14-10-2018 JV59_27350 df936e4b1d17b25d39daec793ded1797 308 Gene3D G3DSA:2.30.30.40 23 147 1.0E-28 T 14-10-2018 JV59_27350 df936e4b1d17b25d39daec793ded1797 308 PIRSF PIRSF002867 1 308 4.2E-103 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV JV59_27350 df936e4b1d17b25d39daec793ded1797 308 Pfam PF00072 Response regulator receiver domain 184 302 1.8E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_27350 df936e4b1d17b25d39daec793ded1797 308 SMART SM00260 17 153 1.5E-25 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JV59_27350 df936e4b1d17b25d39daec793ded1797 308 SUPERFAMILY SSF50341 16 157 7.19E-35 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 JV59_27350 df936e4b1d17b25d39daec793ded1797 308 Gene3D G3DSA:2.40.50.180 39 153 1.0E-28 T 14-10-2018 JV59_27350 df936e4b1d17b25d39daec793ded1797 308 SMART SM00448 182 302 4.5E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_27350 df936e4b1d17b25d39daec793ded1797 308 Pfam PF01584 CheW-like domain 21 155 7.5E-34 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JV59_35825 d75fb923d6b90c6539c5b34a35bb137f 166 SUPERFAMILY SSF53955 1 149 2.66E-20 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily JV59_35825 d75fb923d6b90c6539c5b34a35bb137f 166 Gene3D G3DSA:1.10.530.40 1 165 2.4E-25 T 14-10-2018 JV59_01270 203d6a27a0b947873c89eea41d322425 319 SUPERFAMILY SSF56672 28 227 2.56E-7 T 14-10-2018 JV59_01270 203d6a27a0b947873c89eea41d322425 319 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 34 241 1.7E-26 T 14-10-2018 IPR000477 Reverse transcriptase domain JV59_01270 203d6a27a0b947873c89eea41d322425 319 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 43 55 8.9E-29 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 JV59_01270 203d6a27a0b947873c89eea41d322425 319 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 29 42 8.9E-29 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 JV59_01270 203d6a27a0b947873c89eea41d322425 319 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 88 106 8.9E-29 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 JV59_01270 203d6a27a0b947873c89eea41d322425 319 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 72 86 8.9E-29 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 JV59_01270 203d6a27a0b947873c89eea41d322425 319 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 148 161 8.9E-29 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 JV59_01270 203d6a27a0b947873c89eea41d322425 319 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 236 242 8.9E-29 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 JV59_01270 203d6a27a0b947873c89eea41d322425 319 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 181 192 8.9E-29 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 JV59_30305 2afe346e1a1f20f457c3f2024dc774e9 880 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 840 24.767 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JV59_30305 2afe346e1a1f20f457c3f2024dc774e9 880 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 1.6E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JV59_30305 2afe346e1a1f20f457c3f2024dc774e9 880 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 637 5.0E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JV59_30305 2afe346e1a1f20f457c3f2024dc774e9 880 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 736 8.5E-16 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JV59_30305 2afe346e1a1f20f457c3f2024dc774e9 880 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 792 838 1.3E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JV59_30305 2afe346e1a1f20f457c3f2024dc774e9 880 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 2.3E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JV59_30305 2afe346e1a1f20f457c3f2024dc774e9 880 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 742 788 7.1E-14 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JV59_30305 2afe346e1a1f20f457c3f2024dc774e9 880 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 2.9E-159 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JV59_30305 2afe346e1a1f20f457c3f2024dc774e9 880 Gene3D G3DSA:3.90.199.10 33 520 7.0E-238 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 JV59_30305 2afe346e1a1f20f457c3f2024dc774e9 880 Gene3D G3DSA:1.10.268.10 369 492 7.0E-238 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JV59_30305 2afe346e1a1f20f457c3f2024dc774e9 880 SUPERFAMILY SSF56719 30 520 1.24E-188 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JV59_30305 2afe346e1a1f20f457c3f2024dc774e9 880 Gene3D G3DSA:3.30.1360.40 236 332 7.0E-238 T 14-10-2018 JV59_30305 2afe346e1a1f20f457c3f2024dc774e9 880 SMART SM00434 11 498 0.0 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JV59_30305 2afe346e1a1f20f457c3f2024dc774e9 880 SUPERFAMILY SSF101904 532 852 5.1E-114 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal JV59_30305 2afe346e1a1f20f457c3f2024dc774e9 880 Gene3D G3DSA:2.120.10.90 534 840 7.1E-128 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal JV59_30305 2afe346e1a1f20f457c3f2024dc774e9 880 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 838 0.0 T 14-10-2018 JV59_30230 849a18cd53f650a6be1360ffb41d72bf 393 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 380 23.42 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 JV59_30230 849a18cd53f650a6be1360ffb41d72bf 393 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 373 8.9E-185 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 JV59_30230 849a18cd53f650a6be1360ffb41d72bf 393 Gene3D G3DSA:1.20.1530.10 3 381 6.5E-147 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily JV59_30230 849a18cd53f650a6be1360ffb41d72bf 393 Pfam PF06965 Na+/H+ antiporter 1 7 373 1.4E-143 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 JV59_27745 7a90617de4f02b4b7f5aa0b97fedf129 335 Gene3D G3DSA:3.30.750.140 192 310 3.0E-21 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily JV59_27745 7a90617de4f02b4b7f5aa0b97fedf129 335 Pfam PF02120 Flagellar hook-length control protein FliK 218 298 7.4E-20 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal JV59_33170 d99307ebe911aa9baf61facb6915894f 218 Pfam PF10014 2OG-Fe dioxygenase 24 208 2.5E-53 T 14-10-2018 IPR018724 2OG-Fe dioxygenase JV59_33170 d99307ebe911aa9baf61facb6915894f 218 Gene3D G3DSA:2.60.120.620 1 215 5.6E-52 T 14-10-2018 JV59_26155 b8daf746c9a6c70e0d216922f767c2a4 470 SUPERFAMILY SSF48024 22 133 1.18E-36 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 JV59_26155 b8daf746c9a6c70e0d216922f767c2a4 470 Gene3D G3DSA:3.40.50.300 181 460 1.7E-102 T 14-10-2018 JV59_26155 b8daf746c9a6c70e0d216922f767c2a4 470 SUPERFAMILY SSF52540 201 452 6.11E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_26155 b8daf746c9a6c70e0d216922f767c2a4 470 Gene3D G3DSA:1.10.860.10 17 180 9.3E-53 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal JV59_26155 b8daf746c9a6c70e0d216922f767c2a4 470 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 24 461 7.9E-173 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 JV59_26155 b8daf746c9a6c70e0d216922f767c2a4 470 Pfam PF00772 DnaB-like helicase N terminal domain 24 125 1.2E-34 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 JV59_26155 b8daf746c9a6c70e0d216922f767c2a4 470 Pfam PF03796 DnaB-like helicase C terminal domain 203 459 5.2E-111 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 JV59_37720 d22cd74eb12df23e06abd8db1e66b107 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 140 2.0E-22 T 14-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain JV59_37720 d22cd74eb12df23e06abd8db1e66b107 153 SUPERFAMILY SSF103039 1 153 3.01E-38 T 14-10-2018 IPR028976 CheC-like superfamily JV59_37720 d22cd74eb12df23e06abd8db1e66b107 153 Gene3D G3DSA:3.40.1550.10 1 153 1.1E-46 T 14-10-2018 IPR028976 CheC-like superfamily JV59_19370 1eea269e5639a939c1d139bce70a6428 551 Pfam PF09818 Predicted ATPase of the ABC class 1 438 1.6E-181 T 14-10-2018 IPR019195 ABC transporter, ATPase, putative JV59_19370 1eea269e5639a939c1d139bce70a6428 551 SUPERFAMILY SSF52540 227 409 7.51E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_01985 dd4138d9b0401c841f42f9d6910659ff 162 PIRSF PIRSF005276 3 162 2.9E-62 T 14-10-2018 IPR007481 Stringent starvation protein B JV59_01985 dd4138d9b0401c841f42f9d6910659ff 162 Gene3D G3DSA:2.30.30.220 3 130 5.4E-53 T 14-10-2018 IPR036760 SspB-like superfamily JV59_01985 dd4138d9b0401c841f42f9d6910659ff 162 SUPERFAMILY SSF101738 4 111 1.23E-48 T 14-10-2018 IPR036760 SspB-like superfamily JV59_01985 dd4138d9b0401c841f42f9d6910659ff 162 Pfam PF04386 Stringent starvation protein B 9 162 4.8E-43 T 14-10-2018 IPR007481 Stringent starvation protein B JV59_19710 35c1450ee0e3b6223660f4e52af68b13 169 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 6 157 1.6E-58 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 JV59_19710 35c1450ee0e3b6223660f4e52af68b13 169 PIRSF PIRSF028301 1 169 4.6E-63 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 JV59_19710 35c1450ee0e3b6223660f4e52af68b13 169 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 4 158 1.7E-56 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 JV59_16550 87e170ca7f685295edb04a74da541634 949 ProSitePatterns PS00018 EF-hand calcium-binding domain. 255 267 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site JV59_16550 87e170ca7f685295edb04a74da541634 949 SUPERFAMILY SSF69318 251 488 1.83E-17 T 14-10-2018 JV59_16550 87e170ca7f685295edb04a74da541634 949 Gene3D G3DSA:2.100.10.30 815 949 3.4E-37 T 14-10-2018 IPR036404 Jacalin-like lectin domain superfamily JV59_16550 87e170ca7f685295edb04a74da541634 949 Gene3D G3DSA:2.100.10.30 503 638 1.5E-36 T 14-10-2018 IPR036404 Jacalin-like lectin domain superfamily JV59_16550 87e170ca7f685295edb04a74da541634 949 Pfam PF16458 Beta-prism lectin 507 636 1.3E-49 T 14-10-2018 IPR032496 Hemolysin, beta-prism lectin JV59_16550 87e170ca7f685295edb04a74da541634 949 Pfam PF16458 Beta-prism lectin 819 947 2.7E-48 T 14-10-2018 IPR032496 Hemolysin, beta-prism lectin JV59_16550 87e170ca7f685295edb04a74da541634 949 SUPERFAMILY SSF51101 546 639 4.45E-5 T 14-10-2018 IPR036404 Jacalin-like lectin domain superfamily JV59_16550 87e170ca7f685295edb04a74da541634 949 SUPERFAMILY SSF69318 664 777 8.37E-6 T 14-10-2018 JV59_16550 87e170ca7f685295edb04a74da541634 949 Gene3D G3DSA:2.60.20.40 120 217 2.4E-41 T 14-10-2018 JV59_16550 87e170ca7f685295edb04a74da541634 949 Gene3D G3DSA:2.60.20.40 21 119 7.7E-44 T 14-10-2018 JV59_26740 84349fe2c1aa48b659feba4144981c72 296 Gene3D G3DSA:1.10.1040.10 167 296 4.9E-41 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JV59_26740 84349fe2c1aa48b659feba4144981c72 296 SUPERFAMILY SSF51735 2 166 1.19E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_26740 84349fe2c1aa48b659feba4144981c72 296 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 292 2.2E-77 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 JV59_26740 84349fe2c1aa48b659feba4144981c72 296 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 140 8.5E-29 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain JV59_26740 84349fe2c1aa48b659feba4144981c72 296 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 167 290 3.6E-34 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain JV59_26740 84349fe2c1aa48b659feba4144981c72 296 Gene3D G3DSA:3.40.50.720 1 166 5.1E-49 T 14-10-2018 JV59_26740 84349fe2c1aa48b659feba4144981c72 296 SUPERFAMILY SSF48179 167 290 1.16E-33 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JV59_19530 7aed1b40dfaa03695a65b1263cfac06d 706 SUPERFAMILY SSF51998 121 687 2.11E-189 T 14-10-2018 JV59_19530 7aed1b40dfaa03695a65b1263cfac06d 706 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 3.5E-180 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 JV59_19530 7aed1b40dfaa03695a65b1263cfac06d 706 Pfam PF03477 ATP cone domain 4 89 1.6E-20 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 JV59_19530 7aed1b40dfaa03695a65b1263cfac06d 706 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site JV59_19530 7aed1b40dfaa03695a65b1263cfac06d 706 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 1.3E-196 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 JV59_19530 7aed1b40dfaa03695a65b1263cfac06d 706 Gene3D G3DSA:3.20.70.20 121 687 4.3E-229 T 14-10-2018 JV59_34920 f89faebedec80b708369beafbc1b23be 161 Gene3D G3DSA:2.40.50.140 30 142 1.2E-39 T 14-10-2018 JV59_34920 f89faebedec80b708369beafbc1b23be 161 Pfam PF03100 CcmE 4 136 7.2E-45 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 JV59_34920 f89faebedec80b708369beafbc1b23be 161 SUPERFAMILY SSF82093 30 142 1.83E-38 T 14-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 JV59_34920 f89faebedec80b708369beafbc1b23be 161 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 146 32.251 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 JV59_30735 ac4cc9b2ed11cf0d1d3a24bee9287a45 285 Pfam PF01068 ATP dependent DNA ligase domain 83 200 2.4E-7 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 JV59_30735 ac4cc9b2ed11cf0d1d3a24bee9287a45 285 SUPERFAMILY SSF56091 35 200 1.44E-35 T 14-10-2018 JV59_30735 ac4cc9b2ed11cf0d1d3a24bee9287a45 285 Gene3D G3DSA:3.30.1490.70 33 192 7.6E-53 T 14-10-2018 JV59_30735 ac4cc9b2ed11cf0d1d3a24bee9287a45 285 SUPERFAMILY SSF50249 174 279 5.71E-30 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_30735 ac4cc9b2ed11cf0d1d3a24bee9287a45 285 Gene3D G3DSA:2.40.50.140 198 282 4.0E-8 T 14-10-2018 JV59_30735 ac4cc9b2ed11cf0d1d3a24bee9287a45 285 Gene3D G3DSA:3.30.470.30 53 153 7.6E-53 T 14-10-2018 JV59_30735 ac4cc9b2ed11cf0d1d3a24bee9287a45 285 Pfam PF14743 DNA ligase OB-like domain 215 279 7.6E-27 T 14-10-2018 IPR029319 DNA ligase, OB-like domain JV59_30735 ac4cc9b2ed11cf0d1d3a24bee9287a45 285 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 177 200 - T 14-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 JV59_31340 5c5010c7fb22ec5a5667012305be4bcd 439 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 148 357 1.6E-74 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_31340 5c5010c7fb22ec5a5667012305be4bcd 439 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_31340 5c5010c7fb22ec5a5667012305be4bcd 439 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 26 436 8.5E-161 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_31340 5c5010c7fb22ec5a5667012305be4bcd 439 Gene3D G3DSA:3.40.50.12240 23 438 1.0E-143 T 14-10-2018 JV59_31340 5c5010c7fb22ec5a5667012305be4bcd 439 SUPERFAMILY SSF52540 96 363 4.39E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_31340 5c5010c7fb22ec5a5667012305be4bcd 439 SMART SM00382 160 341 4.9E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_38160 d9576dc5a5c9cde58da8172751207e67 608 SUPERFAMILY SSF54631 145 276 1.3E-15 T 14-10-2018 JV59_38160 d9576dc5a5c9cde58da8172751207e67 608 Gene3D G3DSA:2.60.120.10 5 139 3.4E-12 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_38160 d9576dc5a5c9cde58da8172751207e67 608 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 472 604 5.1E-39 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding JV59_38160 d9576dc5a5c9cde58da8172751207e67 608 SUPERFAMILY SSF51206 8 131 9.69E-17 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like JV59_38160 d9576dc5a5c9cde58da8172751207e67 608 Gene3D G3DSA:3.10.580.10 140 287 7.5E-17 T 14-10-2018 JV59_38160 d9576dc5a5c9cde58da8172751207e67 608 Pfam PF03445 Putative nucleotidyltransferase DUF294 302 428 1.1E-40 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 JV59_38160 d9576dc5a5c9cde58da8172751207e67 608 Pfam PF00027 Cyclic nucleotide-binding domain 32 113 2.5E-9 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain JV59_36000 1265f38ad389cb37c235354fe0179fcc 322 Gene3D G3DSA:1.50.10.150 5 317 5.0E-43 T 14-10-2018 IPR038665 Voltage-dependent anion channel superfamily JV59_36000 1265f38ad389cb37c235354fe0179fcc 322 Pfam PF03595 Voltage-dependent anion channel 19 307 1.1E-30 T 14-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 JV59_26975 873ca9d39d8f4ccf3f0c8e0d2f14f4d9 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 143 2.6E-46 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain JV59_26975 873ca9d39d8f4ccf3f0c8e0d2f14f4d9 231 ProSitePatterns PS01318 TsaA-like domain signature. 85 96 - T 14-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site JV59_26975 873ca9d39d8f4ccf3f0c8e0d2f14f4d9 231 Gene3D G3DSA:3.30.2310.10 145 227 9.8E-19 T 14-10-2018 JV59_26975 873ca9d39d8f4ccf3f0c8e0d2f14f4d9 231 Pfam PF01980 Uncharacterised protein family UPF0066 19 141 6.3E-38 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain JV59_26975 873ca9d39d8f4ccf3f0c8e0d2f14f4d9 231 SUPERFAMILY SSF118196 1 226 4.84E-77 T 14-10-2018 IPR036413 YaeB-like superfamily JV59_26975 873ca9d39d8f4ccf3f0c8e0d2f14f4d9 231 Gene3D G3DSA:2.40.30.70 22 144 1.2E-42 T 14-10-2018 IPR036414 YaeB, N-terminal domain superfamily JV59_20715 24ce9bc7c4bf32551a69aef145733c43 307 SMART SM00382 29 211 1.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_20715 24ce9bc7c4bf32551a69aef145733c43 307 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_20715 24ce9bc7c4bf32551a69aef145733c43 307 Pfam PF00005 ABC transporter 21 164 4.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_20715 24ce9bc7c4bf32551a69aef145733c43 307 SUPERFAMILY SSF52540 3 226 1.22E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_20715 24ce9bc7c4bf32551a69aef145733c43 307 Gene3D G3DSA:3.40.50.300 1 239 2.2E-71 T 14-10-2018 JV59_24650 685d7b82b8fc8363d27d534cf2a6b6fa 377 SUPERFAMILY SSF52540 5 294 1.11E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_24650 685d7b82b8fc8363d27d534cf2a6b6fa 377 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 142 273 3.3E-14 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JV59_24650 685d7b82b8fc8363d27d534cf2a6b6fa 377 Gene3D G3DSA:3.40.50.300 2 302 8.8E-17 T 14-10-2018 JV59_21335 da8cbf1c4de8da2dbb11bc09dca8f2d3 262 SUPERFAMILY SSF56317 1 236 3.14E-57 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JV59_21335 da8cbf1c4de8da2dbb11bc09dca8f2d3 262 Pfam PF00795 Carbon-nitrogen hydrolase 3 235 3.2E-39 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 JV59_21335 da8cbf1c4de8da2dbb11bc09dca8f2d3 262 Gene3D G3DSA:3.60.110.10 1 245 7.1E-64 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JV59_20315 f07c367ae89d04ef3472f7d055be612a 117 SUPERFAMILY SSF74731 2 116 4.32E-50 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_20315 f07c367ae89d04ef3472f7d055be612a 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.1E-52 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_20315 f07c367ae89d04ef3472f7d055be612a 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-22 T 14-10-2018 JV59_20315 f07c367ae89d04ef3472f7d055be612a 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_20315 f07c367ae89d04ef3472f7d055be612a 117 Gene3D G3DSA:1.10.1900.20 56 117 1.0E-28 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_20315 f07c367ae89d04ef3472f7d055be612a 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.6E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_20315 f07c367ae89d04ef3472f7d055be612a 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.6E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_20315 f07c367ae89d04ef3472f7d055be612a 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.6E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_20315 f07c367ae89d04ef3472f7d055be612a 117 Gene3D G3DSA:1.10.720.90 2 55 3.7E-25 T 14-10-2018 JV59_20315 f07c367ae89d04ef3472f7d055be612a 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.654 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_20315 f07c367ae89d04ef3472f7d055be612a 117 Pfam PF00453 Ribosomal protein L20 3 108 5.0E-49 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_23175 76fa5576e8d8641ce308268f49912951 156 Pfam PF01584 CheW-like domain 6 140 3.3E-32 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JV59_23175 76fa5576e8d8641ce308268f49912951 156 SUPERFAMILY SSF50341 5 141 9.02E-34 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 JV59_23175 76fa5576e8d8641ce308268f49912951 156 Gene3D G3DSA:2.30.30.40 9 134 1.3E-36 T 14-10-2018 JV59_23175 76fa5576e8d8641ce308268f49912951 156 Gene3D G3DSA:2.40.50.180 25 135 1.3E-36 T 14-10-2018 JV59_23175 76fa5576e8d8641ce308268f49912951 156 SMART SM00260 2 140 4.5E-30 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JV59_20545 fc12397ac8824338e735c18f5ca7d8a8 645 Gene3D G3DSA:2.60.40.10 277 378 7.7E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_20545 fc12397ac8824338e735c18f5ca7d8a8 645 Gene3D G3DSA:3.60.10.10 380 645 4.3E-30 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JV59_20545 fc12397ac8824338e735c18f5ca7d8a8 645 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 385 635 8.9E-18 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase JV59_20545 fc12397ac8824338e735c18f5ca7d8a8 645 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 114 260 1.1E-12 T 14-10-2018 JV59_20545 fc12397ac8824338e735c18f5ca7d8a8 645 Gene3D G3DSA:2.60.120.200 99 276 5.6E-11 T 14-10-2018 JV59_20545 fc12397ac8824338e735c18f5ca7d8a8 645 SUPERFAMILY SSF49899 91 268 1.68E-15 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily JV59_20545 fc12397ac8824338e735c18f5ca7d8a8 645 SUPERFAMILY SSF56219 377 643 2.22E-28 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JV59_39130 03814acb5b93f4b21d37de47625b69e2 206 ProSitePatterns PS00194 Thioredoxin family active site. 47 65 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 JV59_39130 03814acb5b93f4b21d37de47625b69e2 206 Pfam PF01323 DSBA-like thioredoxin domain 46 195 1.9E-29 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 JV59_39130 03814acb5b93f4b21d37de47625b69e2 206 Gene3D G3DSA:3.40.30.10 17 206 6.1E-54 T 14-10-2018 JV59_39130 03814acb5b93f4b21d37de47625b69e2 206 SUPERFAMILY SSF52833 20 203 1.36E-43 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_39130 03814acb5b93f4b21d37de47625b69e2 206 PIRSF PIRSF001488 1 206 4.4E-70 T 14-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL JV59_19700 44ef556fa87d108010e34e95e10e3647 136 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 6 136 2.0E-35 T 14-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein JV59_19700 44ef556fa87d108010e34e95e10e3647 136 SUPERFAMILY SSF160719 28 129 1.44E-18 T 14-10-2018 JV59_19700 44ef556fa87d108010e34e95e10e3647 136 Pfam PF04965 Gene 25-like lysozyme 28 115 4.3E-17 T 14-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD JV59_19700 44ef556fa87d108010e34e95e10e3647 136 Gene3D G3DSA:3.10.450.40 6 122 6.8E-10 T 14-10-2018 JV59_19275 f34f914931c37cdbc005935993efa7eb 262 Gene3D G3DSA:3.40.50.1820 3 237 2.1E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_19275 f34f914931c37cdbc005935993efa7eb 262 Pfam PF01764 Lipase (class 3) 60 204 6.5E-22 T 14-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 JV59_19275 f34f914931c37cdbc005935993efa7eb 262 SUPERFAMILY SSF53474 9 247 1.01E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_36850 65c6aae867d3e7e4f38730045c44b5c7 226 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 4 225 1.2E-67 T 14-10-2018 IPR002727 Protein of unknown function DUF47 JV59_36850 65c6aae867d3e7e4f38730045c44b5c7 226 SUPERFAMILY SSF109755 29 216 4.01E-16 T 14-10-2018 JV59_36850 65c6aae867d3e7e4f38730045c44b5c7 226 Pfam PF01865 Protein of unknown function DUF47 7 223 2.5E-65 T 14-10-2018 IPR018445 Putative phosphate transport regulator JV59_36850 65c6aae867d3e7e4f38730045c44b5c7 226 Gene3D G3DSA:1.20.58.220 1 225 7.6E-65 T 14-10-2018 IPR038078 PhoU-like domain superfamily JV59_16390 af10cac0c4ca98ec1c954e8d3076a1d5 298 Gene3D G3DSA:1.10.357.140 22 181 7.4E-23 T 14-10-2018 JV59_16390 af10cac0c4ca98ec1c954e8d3076a1d5 298 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 15 296 19.632 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 JV59_16390 af10cac0c4ca98ec1c954e8d3076a1d5 298 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 70 92 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site JV59_16390 af10cac0c4ca98ec1c954e8d3076a1d5 298 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 18 293 7.1E-100 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 JV59_16390 af10cac0c4ca98ec1c954e8d3076a1d5 298 Pfam PF01040 UbiA prenyltransferase family 32 281 5.2E-65 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 JV59_02365 47c8c33a95b0b9b0767f0cde50067bad 429 PIRSF PIRSF005353 1 429 2.9E-188 T 14-10-2018 IPR026033 Purine permease PbuG-like JV59_02365 47c8c33a95b0b9b0767f0cde50067bad 429 Pfam PF00860 Permease family 18 391 5.2E-55 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 JV59_02585 e8061930033108a3bdefe63abc91b854 415 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 23 399 1.7E-140 T 14-10-2018 IPR020010 Conserved hypothetical protein CHP03503 JV59_33775 196f01c8a10b4c685af03315803e5efe 626 Gene3D G3DSA:1.10.287.950 295 612 9.3E-63 T 14-10-2018 JV59_33775 196f01c8a10b4c685af03315803e5efe 626 SMART SM00283 364 625 2.6E-55 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_33775 196f01c8a10b4c685af03315803e5efe 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 410 591 1.1E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_33775 196f01c8a10b4c685af03315803e5efe 626 SUPERFAMILY SSF58104 319 625 2.01E-62 T 14-10-2018 JV59_16995 bdfc3460edff105b4fe4d7817f3b70cb 166 ProSitePatterns PS00194 Thioredoxin family active site. 64 82 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 JV59_16995 bdfc3460edff105b4fe4d7817f3b70cb 166 Gene3D G3DSA:3.40.30.10 27 162 3.9E-22 T 14-10-2018 JV59_16995 bdfc3460edff105b4fe4d7817f3b70cb 166 Pfam PF00578 AhpC/TSA family 37 146 5.4E-10 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JV59_16995 bdfc3460edff105b4fe4d7817f3b70cb 166 SUPERFAMILY SSF52833 36 162 2.5E-26 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_20305 74b7c54a386fdf51afd287298074edef 124 SUPERFAMILY SSF54403 41 110 1.85E-14 T 14-10-2018 JV59_20305 74b7c54a386fdf51afd287298074edef 124 Gene3D G3DSA:3.10.450.10 38 109 3.1E-7 T 14-10-2018 JV59_20305 74b7c54a386fdf51afd287298074edef 124 Pfam PF00031 Cystatin domain 51 98 3.9E-5 T 14-10-2018 IPR000010 Cystatin domain GO:0004869 JV59_21855 aeda414470b284f25bc95e9ffc636c26 307 Gene3D G3DSA:1.10.10.10 5 91 3.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_21855 aeda414470b284f25bc95e9ffc636c26 307 SUPERFAMILY SSF46785 8 114 6.18E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_21855 aeda414470b284f25bc95e9ffc636c26 307 Pfam PF03466 LysR substrate binding domain 90 296 7.7E-43 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_21855 aeda414470b284f25bc95e9ffc636c26 307 Gene3D G3DSA:3.40.190.10 93 294 1.1E-65 T 14-10-2018 JV59_21855 aeda414470b284f25bc95e9ffc636c26 307 SUPERFAMILY SSF53850 91 298 5.61E-47 T 14-10-2018 JV59_21855 aeda414470b284f25bc95e9ffc636c26 307 Gene3D G3DSA:3.40.190.10 166 267 1.1E-65 T 14-10-2018 JV59_21855 aeda414470b284f25bc95e9ffc636c26 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.3E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_24340 57a33a52f0e515b8c5f1b81836df9fb8 442 SUPERFAMILY SSF52540 7 199 2.23E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_24340 57a33a52f0e515b8c5f1b81836df9fb8 442 Pfam PF13635 Domain of unknown function (DUF4143) 221 386 2.3E-16 T 14-10-2018 IPR025420 Domain of unknown function DUF4143 JV59_24340 57a33a52f0e515b8c5f1b81836df9fb8 442 Pfam PF13173 AAA domain 18 148 1.3E-20 T 14-10-2018 JV59_24340 57a33a52f0e515b8c5f1b81836df9fb8 442 Gene3D G3DSA:3.40.50.300 2 112 1.1E-6 T 14-10-2018 JV59_19855 7223d0efbcee699f8681938380ba2721 251 SMART SM00382 26 213 4.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_19855 7223d0efbcee699f8681938380ba2721 251 Gene3D G3DSA:3.40.50.300 1 250 7.7E-63 T 14-10-2018 JV59_19855 7223d0efbcee699f8681938380ba2721 251 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_19855 7223d0efbcee699f8681938380ba2721 251 SUPERFAMILY SSF52540 2 226 1.57E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_19855 7223d0efbcee699f8681938380ba2721 251 Pfam PF00005 ABC transporter 18 164 6.6E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_32750 e137f0a93b5ab332eec1b07e737ba848 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JV59_32750 e137f0a93b5ab332eec1b07e737ba848 246 SUPERFAMILY SSF51735 2 244 2.04E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_32750 e137f0a93b5ab332eec1b07e737ba848 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 2.4E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_32750 e137f0a93b5ab332eec1b07e737ba848 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 2.4E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_32750 e137f0a93b5ab332eec1b07e737ba848 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 2.4E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_32750 e137f0a93b5ab332eec1b07e737ba848 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_32750 e137f0a93b5ab332eec1b07e737ba848 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 2.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_32750 e137f0a93b5ab332eec1b07e737ba848 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 2.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_32750 e137f0a93b5ab332eec1b07e737ba848 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 2.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_32750 e137f0a93b5ab332eec1b07e737ba848 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 2.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_32750 e137f0a93b5ab332eec1b07e737ba848 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_32750 e137f0a93b5ab332eec1b07e737ba848 246 Gene3D G3DSA:3.40.50.720 1 245 8.4E-67 T 14-10-2018 JV59_32750 e137f0a93b5ab332eec1b07e737ba848 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 244 2.5E-56 T 14-10-2018 JV59_30550 89c8a616b476ec1e2db0ca2e9ea86d6a 303 Pfam PF04393 Protein of unknown function (DUF535) 26 295 1.7E-78 T 14-10-2018 IPR007488 Protein of unknown function DUF535 JV59_27830 8921eafb8a77f3dd1b81785d38278d85 339 Gene3D G3DSA:1.10.220.30 202 335 2.0E-27 T 14-10-2018 JV59_27830 8921eafb8a77f3dd1b81785d38278d85 339 Pfam PF01706 FliG C-terminal domain 224 330 1.3E-25 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal JV59_27830 8921eafb8a77f3dd1b81785d38278d85 339 Pfam PF14841 FliG middle domain 123 194 2.4E-21 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain JV59_27830 8921eafb8a77f3dd1b81785d38278d85 339 Gene3D G3DSA:1.10.220.30 5 91 1.5E-18 T 14-10-2018 JV59_27830 8921eafb8a77f3dd1b81785d38278d85 339 SUPERFAMILY SSF48029 122 330 4.05E-55 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical JV59_27830 8921eafb8a77f3dd1b81785d38278d85 339 Pfam PF14842 FliG N-terminal domain 12 109 2.8E-22 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain JV59_27830 8921eafb8a77f3dd1b81785d38278d85 339 SUPERFAMILY SSF48029 13 114 2.62E-17 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical JV59_27830 8921eafb8a77f3dd1b81785d38278d85 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 278 304 4.1E-28 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JV59_27830 8921eafb8a77f3dd1b81785d38278d85 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 254 274 4.1E-28 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JV59_27830 8921eafb8a77f3dd1b81785d38278d85 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 121 144 4.1E-28 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JV59_27830 8921eafb8a77f3dd1b81785d38278d85 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 12 28 4.1E-28 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JV59_27830 8921eafb8a77f3dd1b81785d38278d85 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 41 67 4.1E-28 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JV59_27830 8921eafb8a77f3dd1b81785d38278d85 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 232 252 4.1E-28 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JV59_27830 8921eafb8a77f3dd1b81785d38278d85 339 Gene3D G3DSA:1.10.220.30 96 199 6.9E-24 T 14-10-2018 JV59_23465 be976452f30214a7a229e43107441eb8 371 Gene3D G3DSA:3.40.190.10 144 290 1.8E-31 T 14-10-2018 JV59_23465 be976452f30214a7a229e43107441eb8 371 SUPERFAMILY SSF53850 46 346 3.06E-45 T 14-10-2018 JV59_23465 be976452f30214a7a229e43107441eb8 371 Pfam PF13416 Bacterial extracellular solute-binding protein 60 343 9.3E-32 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein JV59_23465 be976452f30214a7a229e43107441eb8 371 Gene3D G3DSA:3.40.190.10 55 340 1.8E-31 T 14-10-2018 JV59_28870 89a92dbdb3f82354e7a3ea00df79bc77 174 Pfam PF11086 Protein of unknown function (DUF2878) 7 152 1.5E-30 T 14-10-2018 IPR021306 Protein of unknown function DUF2878 JV59_28120 f192d55aef35a66f38623861aa990682 601 Pfam PF00884 Sulfatase 275 514 1.0E-16 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 JV59_28120 f192d55aef35a66f38623861aa990682 601 Pfam PF11893 Domain of unknown function (DUF3413) 6 250 3.1E-98 T 14-10-2018 IPR024588 Inner membrane protein YejM, N-terminal JV59_28120 f192d55aef35a66f38623861aa990682 601 Gene3D G3DSA:3.40.720.10 247 525 1.6E-36 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 JV59_28120 f192d55aef35a66f38623861aa990682 601 PIRSF PIRSF004950 6 599 1.6E-234 T 14-10-2018 IPR012159 Inner membrane protein YejM JV59_28120 f192d55aef35a66f38623861aa990682 601 SUPERFAMILY SSF53649 255 577 1.05E-43 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 JV59_29845 b432f76295d04693fa38fb45ceed3e17 185 SUPERFAMILY SSF51391 3 182 1.57E-28 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 JV59_29845 b432f76295d04693fa38fb45ceed3e17 185 Gene3D G3DSA:3.20.20.70 4 185 1.1E-30 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_29845 b432f76295d04693fa38fb45ceed3e17 185 Pfam PF02581 Thiamine monophosphate synthase 62 179 3.1E-23 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 JV59_31735 b60e165d712ee61084259e9d8ea9c674 159 Gene3D G3DSA:3.10.129.10 5 152 2.8E-25 T 14-10-2018 JV59_31735 b60e165d712ee61084259e9d8ea9c674 159 SUPERFAMILY SSF54637 14 156 8.14E-16 T 14-10-2018 IPR029069 HotDog domain superfamily JV59_31735 b60e165d712ee61084259e9d8ea9c674 159 Pfam PF14539 Domain of unknown function (DUF4442) 17 118 4.3E-9 T 14-10-2018 IPR027961 Protein of unknown function DUF4442 JV59_20930 ac447c3d65796158c100ee782cd51215 299 SUPERFAMILY SSF103481 191 283 1.11E-8 T 14-10-2018 JV59_20930 ac447c3d65796158c100ee782cd51215 299 SUPERFAMILY SSF103481 41 132 2.22E-6 T 14-10-2018 JV59_20930 ac447c3d65796158c100ee782cd51215 299 Pfam PF00892 EamA-like transporter family 7 131 8.2E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_20930 ac447c3d65796158c100ee782cd51215 299 Pfam PF00892 EamA-like transporter family 141 280 4.2E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_33385 a8edda15d7ac8d901df2b333f5fd4edc 164 Pfam PF13505 Outer membrane protein beta-barrel domain 5 163 9.5E-16 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel JV59_33385 a8edda15d7ac8d901df2b333f5fd4edc 164 SUPERFAMILY SSF56925 19 163 1.6E-19 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JV59_33385 a8edda15d7ac8d901df2b333f5fd4edc 164 Gene3D G3DSA:2.40.160.20 18 164 6.3E-22 T 14-10-2018 JV59_35210 b2ee642fbe92120a5cef377803c85079 441 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 22 437 1.7E-174 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_35210 b2ee642fbe92120a5cef377803c85079 441 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 24 435 6.6E-194 T 14-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_35210 b2ee642fbe92120a5cef377803c85079 441 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 2.2E-73 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_35210 b2ee642fbe92120a5cef377803c85079 441 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JV59_35210 b2ee642fbe92120a5cef377803c85079 441 Gene3D G3DSA:3.40.50.12240 19 439 1.5E-155 T 14-10-2018 JV59_35210 b2ee642fbe92120a5cef377803c85079 441 SMART SM00382 158 342 5.4E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_35210 b2ee642fbe92120a5cef377803c85079 441 SUPERFAMILY SSF52540 93 362 1.11E-95 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_01025 fdc4862eb6fc7c55ba96d89a5f3c1368 316 SUPERFAMILY SSF56059 123 313 2.12E-58 T 14-10-2018 JV59_01025 fdc4862eb6fc7c55ba96d89a5f3c1368 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 2.8E-48 T 14-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 JV59_01025 fdc4862eb6fc7c55ba96d89a5f3c1368 316 Gene3D G3DSA:3.30.1490.20 137 196 4.2E-29 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JV59_01025 fdc4862eb6fc7c55ba96d89a5f3c1368 316 Gene3D G3DSA:3.30.470.20 197 300 9.5E-40 T 14-10-2018 JV59_01025 fdc4862eb6fc7c55ba96d89a5f3c1368 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 177.454 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 JV59_01025 fdc4862eb6fc7c55ba96d89a5f3c1368 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 2.3E-139 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 JV59_01025 fdc4862eb6fc7c55ba96d89a5f3c1368 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 1.4E-79 T 14-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 JV59_01025 fdc4862eb6fc7c55ba96d89a5f3c1368 316 SUPERFAMILY SSF52440 2 122 3.74E-46 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JV59_01025 fdc4862eb6fc7c55ba96d89a5f3c1368 316 Gene3D G3DSA:3.40.50.20 1 129 7.0E-53 T 14-10-2018 JV59_17580 f96ec1cf667eee4d276039566c042738 325 Gene3D G3DSA:3.40.50.720 1 134 8.4E-34 T 14-10-2018 JV59_17580 f96ec1cf667eee4d276039566c042738 325 SUPERFAMILY SSF51735 2 152 6.97E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_17580 f96ec1cf667eee4d276039566c042738 325 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 3.1E-24 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 JV59_17580 f96ec1cf667eee4d276039566c042738 325 SUPERFAMILY SSF55347 127 288 1.5E-22 T 14-10-2018 JV59_17580 f96ec1cf667eee4d276039566c042738 325 Gene3D G3DSA:3.30.360.10 135 324 1.5E-52 T 14-10-2018 JV59_30530 604921a6a594a645b3ecb3626f513ae9 416 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 18 396 2.0E-118 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_30530 604921a6a594a645b3ecb3626f513ae9 416 Pfam PF03222 Tryptophan/tyrosine permease family 12 402 5.0E-115 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 JV59_30530 604921a6a594a645b3ecb3626f513ae9 416 PRINTS PR00166 Aromatic amino acid permease signature 153 173 1.7E-74 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_30530 604921a6a594a645b3ecb3626f513ae9 416 PRINTS PR00166 Aromatic amino acid permease signature 189 211 1.7E-74 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_30530 604921a6a594a645b3ecb3626f513ae9 416 PRINTS PR00166 Aromatic amino acid permease signature 227 246 1.7E-74 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_30530 604921a6a594a645b3ecb3626f513ae9 416 PRINTS PR00166 Aromatic amino acid permease signature 343 362 1.7E-74 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_30530 604921a6a594a645b3ecb3626f513ae9 416 PRINTS PR00166 Aromatic amino acid permease signature 288 307 1.7E-74 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_30530 604921a6a594a645b3ecb3626f513ae9 416 PRINTS PR00166 Aromatic amino acid permease signature 322 340 1.7E-74 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_30530 604921a6a594a645b3ecb3626f513ae9 416 PRINTS PR00166 Aromatic amino acid permease signature 21 44 1.7E-74 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_30530 604921a6a594a645b3ecb3626f513ae9 416 PRINTS PR00166 Aromatic amino acid permease signature 93 113 1.7E-74 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_30530 604921a6a594a645b3ecb3626f513ae9 416 PRINTS PR00166 Aromatic amino acid permease signature 48 67 1.7E-74 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_21760 83009d64632f33061389ff9f08878abf 579 Pfam PF13899 Thioredoxin-like 472 551 4.3E-13 T 14-10-2018 JV59_21760 83009d64632f33061389ff9f08878abf 579 Pfam PF11412 Disulphide bond corrector protein DsbC 21 128 1.3E-25 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain JV59_21760 83009d64632f33061389ff9f08878abf 579 SUPERFAMILY SSF52833 473 576 5.47E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_21760 83009d64632f33061389ff9f08878abf 579 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 173 380 1.7E-16 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 JV59_21760 83009d64632f33061389ff9f08878abf 579 SUPERFAMILY SSF74863 19 131 4.05E-28 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily JV59_21760 83009d64632f33061389ff9f08878abf 579 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 579 32.463 T 14-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 JV59_21760 83009d64632f33061389ff9f08878abf 579 Gene3D G3DSA:2.60.40.1250 12 144 6.4E-34 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily JV59_21760 83009d64632f33061389ff9f08878abf 579 Gene3D G3DSA:3.40.30.10 453 579 4.5E-27 T 14-10-2018 JV59_21760 83009d64632f33061389ff9f08878abf 579 ProSitePatterns PS00194 Thioredoxin family active site. 487 505 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 JV59_39345 00c7d27083f30b42815de9fa0849f94e 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 6.4E-44 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39345 00c7d27083f30b42815de9fa0849f94e 140 SUPERFAMILY SSF51344 5 87 1.7E-24 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39345 00c7d27083f30b42815de9fa0849f94e 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 3.0E-40 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39345 00c7d27083f30b42815de9fa0849f94e 140 Gene3D G3DSA:1.20.5.440 92 135 4.3E-19 T 14-10-2018 JV59_39345 00c7d27083f30b42815de9fa0849f94e 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 2.4E-11 T 14-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain JV59_39345 00c7d27083f30b42815de9fa0849f94e 140 Gene3D G3DSA:2.60.15.10 4 91 5.8E-31 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39345 00c7d27083f30b42815de9fa0849f94e 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.814 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39345 00c7d27083f30b42815de9fa0849f94e 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 4.7E-29 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_39345 00c7d27083f30b42815de9fa0849f94e 140 SUPERFAMILY SSF46604 89 138 2.59E-14 T 14-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JV59_35225 d2b5a4b36d58f17fa445f8ea2e5c5fa6 582 Pfam PF01514 Secretory protein of YscJ/FliF family 64 250 1.1E-56 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF JV59_35225 d2b5a4b36d58f17fa445f8ea2e5c5fa6 582 Gene3D G3DSA:3.30.300.30 153 248 2.8E-9 T 14-10-2018 JV59_35225 d2b5a4b36d58f17fa445f8ea2e5c5fa6 582 PIRSF PIRSF004862 29 582 2.2E-159 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JV59_35225 d2b5a4b36d58f17fa445f8ea2e5c5fa6 582 Pfam PF08345 Flagellar M-ring protein C-terminal 283 453 2.5E-40 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal JV59_35225 d2b5a4b36d58f17fa445f8ea2e5c5fa6 582 PRINTS PR01009 Flagellar M-ring protein signature 296 314 3.8E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JV59_35225 d2b5a4b36d58f17fa445f8ea2e5c5fa6 582 PRINTS PR01009 Flagellar M-ring protein signature 151 169 3.8E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JV59_35225 d2b5a4b36d58f17fa445f8ea2e5c5fa6 582 PRINTS PR01009 Flagellar M-ring protein signature 183 197 3.8E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JV59_35225 d2b5a4b36d58f17fa445f8ea2e5c5fa6 582 PRINTS PR01009 Flagellar M-ring protein signature 376 400 3.8E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JV59_35225 d2b5a4b36d58f17fa445f8ea2e5c5fa6 582 PRINTS PR01009 Flagellar M-ring protein signature 226 244 3.8E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JV59_35225 d2b5a4b36d58f17fa445f8ea2e5c5fa6 582 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 55 579 1.3E-76 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JV59_32485 b62f28514e92e3e17c90a4a3d9a5b95c 155 SUPERFAMILY SSF88697 6 155 4.22E-48 T 14-10-2018 IPR015947 PUA-like superfamily JV59_32485 b62f28514e92e3e17c90a4a3d9a5b95c 155 PIRSF PIRSF021320 1 155 6.3E-47 T 14-10-2018 IPR009326 Protein of unknown function DUF984 JV59_32485 b62f28514e92e3e17c90a4a3d9a5b95c 155 Pfam PF04266 ASCH domain 40 153 2.0E-22 T 14-10-2018 IPR007374 ASCH domain JV59_32485 b62f28514e92e3e17c90a4a3d9a5b95c 155 Gene3D G3DSA:3.10.400.10 1 153 1.9E-56 T 14-10-2018 JV59_32485 b62f28514e92e3e17c90a4a3d9a5b95c 155 SMART SM01022 30 153 8.3E-35 T 14-10-2018 IPR007374 ASCH domain JV59_29390 989f9c50a8c1e0ff4057b441d3471cce 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 10 410 1.7E-56 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_29390 989f9c50a8c1e0ff4057b441d3471cce 446 Pfam PF01554 MatE 238 399 6.0E-21 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_29390 989f9c50a8c1e0ff4057b441d3471cce 446 Pfam PF01554 MatE 10 175 2.5E-18 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_37210 a7773e55a8bb0bb6d648ae146905cbe6 594 Pfam PF00682 HMGL-like 6 270 1.1E-59 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 JV59_37210 a7773e55a8bb0bb6d648ae146905cbe6 594 Gene3D G3DSA:2.40.50.100 518 594 1.2E-22 T 14-10-2018 JV59_37210 a7773e55a8bb0bb6d648ae146905cbe6 594 SUPERFAMILY SSF89000 297 461 7.45E-51 T 14-10-2018 JV59_37210 a7773e55a8bb0bb6d648ae146905cbe6 594 SUPERFAMILY SSF51230 517 593 8.9E-21 T 14-10-2018 IPR011053 Single hybrid motif JV59_37210 a7773e55a8bb0bb6d648ae146905cbe6 594 Gene3D G3DSA:3.20.20.70 1 464 1.1E-173 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_37210 a7773e55a8bb0bb6d648ae146905cbe6 594 Pfam PF00364 Biotin-requiring enzyme 529 592 2.4E-16 T 14-10-2018 IPR000089 Biotin/lipoyl attachment JV59_37210 a7773e55a8bb0bb6d648ae146905cbe6 594 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 550 567 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JV59_37210 a7773e55a8bb0bb6d648ae146905cbe6 594 SUPERFAMILY SSF51569 1 300 6.04E-90 T 14-10-2018 JV59_37210 a7773e55a8bb0bb6d648ae146905cbe6 594 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 588 8.8E-269 T 14-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 JV59_37210 a7773e55a8bb0bb6d648ae146905cbe6 594 Pfam PF02436 Conserved carboxylase domain 292 492 1.9E-58 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 JV59_25705 485cfa772b90e6eda481bcd0905517e4 242 Gene3D G3DSA:1.10.10.10 124 234 1.4E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_25705 485cfa772b90e6eda481bcd0905517e4 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 221 4.1E-12 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_25705 485cfa772b90e6eda481bcd0905517e4 242 SUPERFAMILY SSF46894 124 222 5.95E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_25705 485cfa772b90e6eda481bcd0905517e4 242 SMART SM00862 145 221 2.5E-8 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_29005 c76d0414bc91191ab614dc8a8c72c21f 539 Gene3D G3DSA:3.90.76.10 44 216 1.8E-144 T 14-10-2018 JV59_29005 c76d0414bc91191ab614dc8a8c72c21f 539 SUPERFAMILY SSF53850 34 533 1.19E-128 T 14-10-2018 JV59_29005 c76d0414bc91191ab614dc8a8c72c21f 539 Gene3D G3DSA:3.10.105.10 296 514 1.8E-144 T 14-10-2018 JV59_29005 c76d0414bc91191ab614dc8a8c72c21f 539 PIRSF PIRSF002741 1 539 2.6E-90 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 JV59_29005 c76d0414bc91191ab614dc8a8c72c21f 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 455 3.2E-85 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain JV59_29005 c76d0414bc91191ab614dc8a8c72c21f 539 Gene3D G3DSA:3.40.190.10 217 526 1.8E-144 T 14-10-2018 JV59_20800 8bb5a2035e7178a6961c7c9a87096f29 1041 Gene3D G3DSA:3.30.2090.10 708 795 3.1E-257 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_20800 8bb5a2035e7178a6961c7c9a87096f29 1041 SUPERFAMILY SSF82866 292 487 8.37E-35 T 14-10-2018 JV59_20800 8bb5a2035e7178a6961c7c9a87096f29 1041 PRINTS PR00702 Acriflavin resistance protein family signature 16 40 1.7E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_20800 8bb5a2035e7178a6961c7c9a87096f29 1041 PRINTS PR00702 Acriflavin resistance protein family signature 44 62 1.7E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_20800 8bb5a2035e7178a6961c7c9a87096f29 1041 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.7E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_20800 8bb5a2035e7178a6961c7c9a87096f29 1041 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.7E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_20800 8bb5a2035e7178a6961c7c9a87096f29 1041 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.7E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_20800 8bb5a2035e7178a6961c7c9a87096f29 1041 Gene3D G3DSA:1.20.1640.10 16 501 3.1E-257 T 14-10-2018 JV59_20800 8bb5a2035e7178a6961c7c9a87096f29 1041 Gene3D G3DSA:3.30.70.1430 559 658 3.1E-257 T 14-10-2018 JV59_20800 8bb5a2035e7178a6961c7c9a87096f29 1041 Gene3D G3DSA:3.30.2090.10 180 270 3.1E-257 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_20800 8bb5a2035e7178a6961c7c9a87096f29 1041 Pfam PF00873 AcrB/AcrD/AcrF family 10 1016 3.5E-162 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 JV59_20800 8bb5a2035e7178a6961c7c9a87096f29 1041 SUPERFAMILY SSF82866 792 1018 1.83E-48 T 14-10-2018 JV59_20800 8bb5a2035e7178a6961c7c9a87096f29 1041 SUPERFAMILY SSF82714 719 791 6.15E-7 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_20800 8bb5a2035e7178a6961c7c9a87096f29 1041 Gene3D G3DSA:1.20.1640.10 502 1013 3.1E-257 T 14-10-2018 JV59_20800 8bb5a2035e7178a6961c7c9a87096f29 1041 Gene3D G3DSA:3.30.70.1430 46 803 3.1E-257 T 14-10-2018 JV59_20800 8bb5a2035e7178a6961c7c9a87096f29 1041 SUPERFAMILY SSF82693 149 325 8.63E-12 T 14-10-2018 JV59_20800 8bb5a2035e7178a6961c7c9a87096f29 1041 SUPERFAMILY SSF82714 183 266 1.57E-14 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JV59_20800 8bb5a2035e7178a6961c7c9a87096f29 1041 SUPERFAMILY SSF82693 46 137 3.61E-18 T 14-10-2018 JV59_20800 8bb5a2035e7178a6961c7c9a87096f29 1041 Gene3D G3DSA:3.30.70.1440 659 856 3.1E-257 T 14-10-2018 JV59_20800 8bb5a2035e7178a6961c7c9a87096f29 1041 Gene3D G3DSA:3.30.70.1320 139 327 3.1E-257 T 14-10-2018 JV59_36390 71e708d0ba045b6aee6ab370fa45a1ba 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.1E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_36390 71e708d0ba045b6aee6ab370fa45a1ba 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.1E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_36390 71e708d0ba045b6aee6ab370fa45a1ba 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.1E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_36390 71e708d0ba045b6aee6ab370fa45a1ba 302 SUPERFAMILY SSF46785 4 82 1.09E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_36390 71e708d0ba045b6aee6ab370fa45a1ba 302 Gene3D G3DSA:3.40.190.10 167 266 2.6E-47 T 14-10-2018 JV59_36390 71e708d0ba045b6aee6ab370fa45a1ba 302 Gene3D G3DSA:3.40.190.10 103 293 2.6E-47 T 14-10-2018 JV59_36390 71e708d0ba045b6aee6ab370fa45a1ba 302 Gene3D G3DSA:1.10.10.10 9 74 8.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_36390 71e708d0ba045b6aee6ab370fa45a1ba 302 SUPERFAMILY SSF53850 91 300 1.25E-35 T 14-10-2018 JV59_36390 71e708d0ba045b6aee6ab370fa45a1ba 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 2.3E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_36390 71e708d0ba045b6aee6ab370fa45a1ba 302 Pfam PF03466 LysR substrate binding domain 90 296 1.3E-28 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_32790 89f7aba86e00f7f853d388a049784194 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 62 181 7.5E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_32790 89f7aba86e00f7f853d388a049784194 215 Gene3D G3DSA:3.40.50.1000 5 182 8.6E-49 T 14-10-2018 IPR023214 HAD superfamily JV59_32790 89f7aba86e00f7f853d388a049784194 215 Gene3D G3DSA:1.10.150.240 17 83 8.6E-49 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JV59_32790 89f7aba86e00f7f853d388a049784194 215 SUPERFAMILY SSF56784 1 188 3.45E-45 T 14-10-2018 IPR036412 HAD-like superfamily JV59_32790 89f7aba86e00f7f853d388a049784194 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 177 7.3E-23 T 14-10-2018 JV59_22185 69281d0f8ccc0284490d38ffc5a50284 655 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 149 4.4E-14 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain JV59_22185 69281d0f8ccc0284490d38ffc5a50284 655 SUPERFAMILY SSF56935 23 654 2.75E-106 T 14-10-2018 JV59_22185 69281d0f8ccc0284490d38ffc5a50284 655 Pfam PF00593 TonB dependent receptor 213 652 4.4E-49 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel JV59_22185 69281d0f8ccc0284490d38ffc5a50284 655 Gene3D G3DSA:2.40.170.20 40 655 4.8E-148 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily JV59_23140 6da55b4dd376969c90ccd795a508ea98 323 Pfam PF02195 ParB-like nuclease domain 74 142 9.9E-8 T 14-10-2018 IPR003115 ParB/Sulfiredoxin JV59_23140 6da55b4dd376969c90ccd795a508ea98 323 Gene3D G3DSA:1.10.10.2830 153 267 6.3E-15 T 14-10-2018 JV59_23140 6da55b4dd376969c90ccd795a508ea98 323 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 68 228 1.5E-22 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 JV59_23140 6da55b4dd376969c90ccd795a508ea98 323 SUPERFAMILY SSF110849 75 150 4.45E-9 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily JV59_23140 6da55b4dd376969c90ccd795a508ea98 323 SMART SM00470 53 149 4.8E-7 T 14-10-2018 IPR003115 ParB/Sulfiredoxin JV59_24360 d5cb9e17c088656b3c3ed960093e1094 94 Gene3D G3DSA:1.10.287.1080 1 94 2.1E-26 T 14-10-2018 JV59_24360 d5cb9e17c088656b3c3ed960093e1094 94 SUPERFAMILY SSF101386 1 93 5.89E-19 T 14-10-2018 JV59_24360 d5cb9e17c088656b3c3ed960093e1094 94 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 22 89 1.6E-9 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core JV59_27970 32928422f09c12de92f6185c1b2910d9 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 4.1E-41 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 JV59_27970 32928422f09c12de92f6185c1b2910d9 213 Gene3D G3DSA:3.40.50.300 3 213 1.5E-59 T 14-10-2018 JV59_27970 32928422f09c12de92f6185c1b2910d9 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 39.399 T 14-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 JV59_27970 32928422f09c12de92f6185c1b2910d9 213 SUPERFAMILY SSF52540 6 204 2.4E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_27970 32928422f09c12de92f6185c1b2910d9 213 TIGRFAM TIGR00235 udk: uridine kinase 3 211 3.1E-89 T 14-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 JV59_27970 32928422f09c12de92f6185c1b2910d9 213 PRINTS PR00988 Uridine kinase signature 178 191 3.6E-36 T 14-10-2018 JV59_27970 32928422f09c12de92f6185c1b2910d9 213 PRINTS PR00988 Uridine kinase signature 156 167 3.6E-36 T 14-10-2018 JV59_27970 32928422f09c12de92f6185c1b2910d9 213 PRINTS PR00988 Uridine kinase signature 86 101 3.6E-36 T 14-10-2018 JV59_27970 32928422f09c12de92f6185c1b2910d9 213 PRINTS PR00988 Uridine kinase signature 142 152 3.6E-36 T 14-10-2018 JV59_27970 32928422f09c12de92f6185c1b2910d9 213 PRINTS PR00988 Uridine kinase signature 41 52 3.6E-36 T 14-10-2018 JV59_27970 32928422f09c12de92f6185c1b2910d9 213 PRINTS PR00988 Uridine kinase signature 7 24 3.6E-36 T 14-10-2018 JV59_33350 12057b2d46b9378f6585e04914d45648 66 Pfam PF11747 Killing trait 8 56 5.6E-13 T 14-10-2018 IPR021070 Killing trait, RebB JV59_35735 aae3563a2dd2c404d0abdb69f160e9c4 201 SUPERFAMILY SSF51064 146 201 7.98E-20 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 JV59_35735 aae3563a2dd2c404d0abdb69f160e9c4 201 Pfam PF01025 GrpE 39 201 4.3E-54 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JV59_35735 aae3563a2dd2c404d0abdb69f160e9c4 201 PRINTS PR00773 GrpE protein signature 98 113 6.3E-29 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JV59_35735 aae3563a2dd2c404d0abdb69f160e9c4 201 PRINTS PR00773 GrpE protein signature 70 86 6.3E-29 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JV59_35735 aae3563a2dd2c404d0abdb69f160e9c4 201 PRINTS PR00773 GrpE protein signature 180 199 6.3E-29 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JV59_35735 aae3563a2dd2c404d0abdb69f160e9c4 201 PRINTS PR00773 GrpE protein signature 153 168 6.3E-29 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JV59_35735 aae3563a2dd2c404d0abdb69f160e9c4 201 Hamap MF_01151 Protein GrpE [grpE]. 2 201 22.657 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JV59_35735 aae3563a2dd2c404d0abdb69f160e9c4 201 SUPERFAMILY SSF58014 47 145 1.05E-29 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 JV59_35735 aae3563a2dd2c404d0abdb69f160e9c4 201 ProSitePatterns PS01071 grpE protein signature. 156 199 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JV59_35735 aae3563a2dd2c404d0abdb69f160e9c4 201 Gene3D G3DSA:3.90.20.20 38 144 5.2E-33 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 JV59_35735 aae3563a2dd2c404d0abdb69f160e9c4 201 Gene3D G3DSA:2.30.22.10 145 201 4.5E-26 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 JV59_34545 a76d559a3fbd0506849e0deb1148a17b 371 Pfam PF00570 HRDC domain 213 279 5.2E-9 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 JV59_34545 a76d559a3fbd0506849e0deb1148a17b 371 TIGRFAM TIGR01388 rnd: ribonuclease D 5 370 2.3E-146 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 JV59_34545 a76d559a3fbd0506849e0deb1148a17b 371 SMART SM00474 3 171 1.9E-48 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 JV59_34545 a76d559a3fbd0506849e0deb1148a17b 371 SUPERFAMILY SSF47819 194 301 1.42E-20 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 JV59_34545 a76d559a3fbd0506849e0deb1148a17b 371 SUPERFAMILY SSF47819 296 371 1.96E-19 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 JV59_34545 a76d559a3fbd0506849e0deb1148a17b 371 SUPERFAMILY SSF53098 2 209 1.23E-69 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JV59_34545 a76d559a3fbd0506849e0deb1148a17b 371 Pfam PF01612 3'-5' exonuclease 3 170 2.6E-41 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 JV59_34545 a76d559a3fbd0506849e0deb1148a17b 371 Gene3D G3DSA:1.10.150.80 195 293 3.0E-17 T 14-10-2018 JV59_34545 a76d559a3fbd0506849e0deb1148a17b 371 Hamap MF_01899 Ribonuclease D [rnd]. 3 371 43.188 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 JV59_34545 a76d559a3fbd0506849e0deb1148a17b 371 Gene3D G3DSA:1.10.150.80 294 371 2.9E-26 T 14-10-2018 JV59_34545 a76d559a3fbd0506849e0deb1148a17b 371 Gene3D G3DSA:3.30.420.10 1 194 1.2E-68 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JV59_21990 37b049a70ebe75448269ec317383a91f 298 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 85 100 1.2E-16 T 14-10-2018 JV59_21990 37b049a70ebe75448269ec317383a91f 298 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 210 228 1.2E-16 T 14-10-2018 JV59_21990 37b049a70ebe75448269ec317383a91f 298 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 238 255 1.2E-16 T 14-10-2018 JV59_21990 37b049a70ebe75448269ec317383a91f 298 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 275 288 1.2E-16 T 14-10-2018 JV59_21990 37b049a70ebe75448269ec317383a91f 298 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 54 72 1.2E-16 T 14-10-2018 JV59_21990 37b049a70ebe75448269ec317383a91f 298 Gene3D G3DSA:3.40.50.1980 123 297 4.6E-53 T 14-10-2018 JV59_21990 37b049a70ebe75448269ec317383a91f 298 SUPERFAMILY SSF53807 32 294 3.49E-60 T 14-10-2018 JV59_21990 37b049a70ebe75448269ec317383a91f 298 Pfam PF01497 Periplasmic binding protein 37 273 7.3E-28 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain JV59_21990 37b049a70ebe75448269ec317383a91f 298 Gene3D G3DSA:3.40.50.1980 31 120 5.9E-29 T 14-10-2018 JV59_38185 a332de2b40f29da5e57be3b88f54eeea 295 PIRSF PIRSF000401 1 295 9.3E-100 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 JV59_38185 a332de2b40f29da5e57be3b88f54eeea 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 1.0E-108 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 JV59_38185 a332de2b40f29da5e57be3b88f54eeea 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 7.8E-104 T 14-10-2018 JV59_38185 a332de2b40f29da5e57be3b88f54eeea 295 SUPERFAMILY SSF53335 50 274 1.09E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_38185 a332de2b40f29da5e57be3b88f54eeea 295 Gene3D G3DSA:3.40.50.150 102 294 9.4E-57 T 14-10-2018 JV59_38185 a332de2b40f29da5e57be3b88f54eeea 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 33.501 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 JV59_24700 663e42dfcba5f60a41fd65be4517095d 197 SUPERFAMILY SSF52499 4 190 1.15E-40 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 JV59_24700 663e42dfcba5f60a41fd65be4517095d 197 Pfam PF00857 Isochorismatase family 12 167 2.2E-22 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 JV59_24700 663e42dfcba5f60a41fd65be4517095d 197 Gene3D G3DSA:3.40.50.850 1 197 1.2E-45 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 JV59_16010 001bb3ffe4888abda734915bfeb297c5 373 SUPERFAMILY SSF50331 241 360 3.4E-19 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal JV59_16010 001bb3ffe4888abda734915bfeb297c5 373 Pfam PF08402 TOBE domain 282 360 6.4E-17 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 JV59_16010 001bb3ffe4888abda734915bfeb297c5 373 Pfam PF00005 ABC transporter 25 166 1.3E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_16010 001bb3ffe4888abda734915bfeb297c5 373 Gene3D G3DSA:3.40.50.300 1 243 3.3E-79 T 14-10-2018 JV59_16010 001bb3ffe4888abda734915bfeb297c5 373 Gene3D G3DSA:2.40.50.140 244 284 5.1E-8 T 14-10-2018 JV59_16010 001bb3ffe4888abda734915bfeb297c5 373 SMART SM00382 33 216 1.1E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_16010 001bb3ffe4888abda734915bfeb297c5 373 Gene3D G3DSA:2.40.50.100 285 346 5.1E-8 T 14-10-2018 JV59_16010 001bb3ffe4888abda734915bfeb297c5 373 SUPERFAMILY SSF52540 8 247 1.54E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_16010 001bb3ffe4888abda734915bfeb297c5 373 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 39 358 2.0E-118 T 14-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 JV59_16010 001bb3ffe4888abda734915bfeb297c5 373 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_35450 39f6254f61af2167186756616addbd97 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 3.0E-29 T 14-10-2018 IPR033248 Transketolase, C-terminal domain JV59_35450 39f6254f61af2167186756616addbd97 621 SUPERFAMILY SSF52518 8 381 1.12E-77 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_35450 39f6254f61af2167186756616addbd97 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 45.982 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JV59_35450 39f6254f61af2167186756616addbd97 621 Gene3D G3DSA:3.40.50.920 495 620 1.8E-44 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JV59_35450 39f6254f61af2167186756616addbd97 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 8.3E-304 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JV59_35450 39f6254f61af2167186756616addbd97 621 Gene3D G3DSA:3.40.50.970 317 489 2.3E-64 T 14-10-2018 JV59_35450 39f6254f61af2167186756616addbd97 621 SUPERFAMILY SSF52922 492 620 2.09E-34 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JV59_35450 39f6254f61af2167186756616addbd97 621 SMART SM00861 319 483 1.4E-62 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JV59_35450 39f6254f61af2167186756616addbd97 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JV59_35450 39f6254f61af2167186756616addbd97 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 5.6E-121 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JV59_35450 39f6254f61af2167186756616addbd97 621 SUPERFAMILY SSF52518 317 504 5.16E-57 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_35450 39f6254f61af2167186756616addbd97 621 Pfam PF02779 Transketolase, pyrimidine binding domain 318 478 6.8E-37 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JV59_35450 39f6254f61af2167186756616addbd97 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JV59_35075 2915e6754678f30007707b244228335b 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 1.3E-140 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JV59_35075 2915e6754678f30007707b244228335b 308 Gene3D G3DSA:3.90.226.10 25 285 5.5E-82 T 14-10-2018 JV59_35075 2915e6754678f30007707b244228335b 308 SUPERFAMILY SSF52096 25 283 5.29E-84 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JV59_35075 2915e6754678f30007707b244228335b 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.393 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JV59_35075 2915e6754678f30007707b244228335b 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.6E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JV59_35075 2915e6754678f30007707b244228335b 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.6E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JV59_35075 2915e6754678f30007707b244228335b 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.6E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JV59_35075 2915e6754678f30007707b244228335b 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.6E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JV59_35075 2915e6754678f30007707b244228335b 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.6E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JV59_35075 2915e6754678f30007707b244228335b 308 Pfam PF01039 Carboxyl transferase domain 100 240 9.9E-14 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 JV59_00410 6b569a22c4f613cabb6552460a9524f3 326 Gene3D G3DSA:2.130.10.10 23 244 1.1E-31 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 JV59_00410 6b569a22c4f613cabb6552460a9524f3 326 Gene3D G3DSA:2.130.10.10 245 326 8.2E-9 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 JV59_00410 6b569a22c4f613cabb6552460a9524f3 326 SMART SM00320 233 274 0.45 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 JV59_00410 6b569a22c4f613cabb6552460a9524f3 326 SMART SM00320 151 189 7.8E-6 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 JV59_00410 6b569a22c4f613cabb6552460a9524f3 326 SMART SM00320 192 230 0.03 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 JV59_00410 6b569a22c4f613cabb6552460a9524f3 326 SMART SM00320 285 323 40.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 JV59_00410 6b569a22c4f613cabb6552460a9524f3 326 SMART SM00320 65 106 320.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 JV59_00410 6b569a22c4f613cabb6552460a9524f3 326 SUPERFAMILY SSF50998 34 324 5.34E-43 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily JV59_00410 6b569a22c4f613cabb6552460a9524f3 326 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 176 190 - T 14-10-2018 IPR019775 WD40 repeat, conserved site JV59_00410 6b569a22c4f613cabb6552460a9524f3 326 Pfam PF13360 PQQ-like domain 74 236 2.3E-5 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat JV59_19495 77352a4334199dfed3eead4e90044bff 205 Gene3D G3DSA:3.30.1330.60 65 204 6.6E-32 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_19495 77352a4334199dfed3eead4e90044bff 205 PRINTS PR01021 OMPA domain signature 100 122 1.1E-10 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_19495 77352a4334199dfed3eead4e90044bff 205 PRINTS PR01021 OMPA domain signature 145 161 1.1E-10 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_19495 77352a4334199dfed3eead4e90044bff 205 PRINTS PR01021 OMPA domain signature 130 145 1.1E-10 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_19495 77352a4334199dfed3eead4e90044bff 205 Pfam PF00691 OmpA family 100 194 1.6E-16 T 14-10-2018 IPR006665 OmpA-like domain JV59_19495 77352a4334199dfed3eead4e90044bff 205 SUPERFAMILY SSF103088 87 200 9.42E-33 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_20265 ebccfcdb2c3a0151d70c3ae86fd82f0c 99 SUPERFAMILY SSF54909 1 89 3.96E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_20265 ebccfcdb2c3a0151d70c3ae86fd82f0c 99 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 2.5E-14 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain JV59_20265 ebccfcdb2c3a0151d70c3ae86fd82f0c 99 Gene3D G3DSA:3.30.70.100 1 99 4.1E-24 T 14-10-2018 JV59_38810 52815f767df8f8b1a23b1016aa9fb7b6 195 SUPERFAMILY SSF89360 4 100 2.75E-23 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 JV59_38810 52815f767df8f8b1a23b1016aa9fb7b6 195 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 5 195 1.0E-96 T 14-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 JV59_38810 52815f767df8f8b1a23b1016aa9fb7b6 195 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 122 181 3.0E-25 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 JV59_38810 52815f767df8f8b1a23b1016aa9fb7b6 195 Gene3D G3DSA:3.30.300.130 104 192 2.3E-19 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily JV59_38810 52815f767df8f8b1a23b1016aa9fb7b6 195 Gene3D G3DSA:2.60.300.12 4 101 1.5E-15 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 JV59_38810 52815f767df8f8b1a23b1016aa9fb7b6 195 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 4 195 44.641 T 14-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 JV59_38810 52815f767df8f8b1a23b1016aa9fb7b6 195 SUPERFAMILY SSF117916 98 187 1.09E-22 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily JV59_38810 52815f767df8f8b1a23b1016aa9fb7b6 195 Pfam PF01106 NifU-like domain 114 176 1.9E-19 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 JV59_38810 52815f767df8f8b1a23b1016aa9fb7b6 195 Pfam PF01521 Iron-sulphur cluster biosynthesis 5 101 1.3E-13 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 JV59_38765 24f415b24f14b020750732d6771a0817 314 Pfam PF04773 FecR protein 109 198 2.4E-18 T 14-10-2018 IPR006860 FecR protein JV59_38765 24f415b24f14b020750732d6771a0817 314 PIRSF PIRSF018266 1 312 3.0E-73 T 14-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component JV59_38765 24f415b24f14b020750732d6771a0817 314 Gene3D G3DSA:2.60.120.1440 94 233 1.1E-18 T 14-10-2018 JV59_38765 24f415b24f14b020750732d6771a0817 314 Pfam PF16220 Domain of unknown function (DUF4880) 10 52 3.8E-11 T 14-10-2018 IPR032623 FecR, N-terminal JV59_28580 337718e3a21a0604f640e1417aaf40e5 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 386 2.8E-27 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_28580 337718e3a21a0604f640e1417aaf40e5 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 251 280 2.8E-27 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_28580 337718e3a21a0604f640e1417aaf40e5 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 328 355 2.8E-27 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_28580 337718e3a21a0604f640e1417aaf40e5 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 2.8E-27 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_28580 337718e3a21a0604f640e1417aaf40e5 483 Gene3D G3DSA:1.10.287.950 181 478 1.8E-50 T 14-10-2018 JV59_28580 337718e3a21a0604f640e1417aaf40e5 483 SMART SM00283 223 477 5.9E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_28580 337718e3a21a0604f640e1417aaf40e5 483 SUPERFAMILY SSF58104 233 480 4.84E-46 T 14-10-2018 JV59_28580 337718e3a21a0604f640e1417aaf40e5 483 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 293 451 1.1E-33 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_28965 7aa019356e1268f8983145542e3455d4 404 Pfam PF11449 Putative, 10TM heavy-metal exporter 41 402 1.2E-157 T 14-10-2018 IPR021552 Putative, 10TM heavy-metal exporter JV59_35795 2d70a781bcad9a07b3519be48da5aaf5 574 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 9 476 4.9E-80 T 14-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 JV59_35795 2d70a781bcad9a07b3519be48da5aaf5 574 Pfam PF12161 HsdM N-terminal domain 10 145 1.0E-33 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain JV59_35795 2d70a781bcad9a07b3519be48da5aaf5 574 Gene3D G3DSA:3.40.50.150 158 452 7.7E-105 T 14-10-2018 JV59_35795 2d70a781bcad9a07b3519be48da5aaf5 574 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 181 197 6.8E-18 T 14-10-2018 JV59_35795 2d70a781bcad9a07b3519be48da5aaf5 574 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 205 219 6.8E-18 T 14-10-2018 JV59_35795 2d70a781bcad9a07b3519be48da5aaf5 574 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 282 294 6.8E-18 T 14-10-2018 JV59_35795 2d70a781bcad9a07b3519be48da5aaf5 574 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 318 342 6.8E-18 T 14-10-2018 JV59_35795 2d70a781bcad9a07b3519be48da5aaf5 574 SUPERFAMILY SSF53335 8 574 4.0E-145 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_35795 2d70a781bcad9a07b3519be48da5aaf5 574 Pfam PF02384 N-6 DNA Methylase 158 464 4.6E-109 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 JV59_35795 2d70a781bcad9a07b3519be48da5aaf5 574 Gene3D G3DSA:1.20.1260.30 1 148 3.2E-42 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily JV59_24795 357da469e23859261660f289f6d91d95 111 Pfam PF13560 Helix-turn-helix domain 24 79 2.6E-7 T 14-10-2018 JV59_24795 357da469e23859261660f289f6d91d95 111 SMART SM00530 27 82 1.6E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_24795 357da469e23859261660f289f6d91d95 111 Gene3D G3DSA:1.10.260.40 14 85 1.9E-13 T 14-10-2018 JV59_24795 357da469e23859261660f289f6d91d95 111 SUPERFAMILY SSF47413 17 81 6.52E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_35050 490fe02b227675541c3fb9231edcb5c8 261 SMART SM00382 29 199 6.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_35050 490fe02b227675541c3fb9231edcb5c8 261 Pfam PF00005 ABC transporter 20 148 1.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_35050 490fe02b227675541c3fb9231edcb5c8 261 ProSitePatterns PS00211 ABC transporters family signature. 121 135 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_35050 490fe02b227675541c3fb9231edcb5c8 261 SUPERFAMILY SSF52540 3 225 3.85E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_35050 490fe02b227675541c3fb9231edcb5c8 261 Gene3D G3DSA:3.40.50.300 1 241 1.0E-56 T 14-10-2018 JV59_40380 e4ff9f63361c2beb9d81a3fea7fdd90c 379 Gene3D G3DSA:3.20.20.70 3 378 2.5E-123 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_40380 e4ff9f63361c2beb9d81a3fea7fdd90c 379 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 14-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 JV59_40380 e4ff9f63361c2beb9d81a3fea7fdd90c 379 SUPERFAMILY SSF51395 7 371 3.24E-96 T 14-10-2018 JV59_40380 e4ff9f63361c2beb9d81a3fea7fdd90c 379 PIRSF PIRSF000138 2 379 2.4E-120 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 JV59_40380 e4ff9f63361c2beb9d81a3fea7fdd90c 379 Pfam PF01070 FMN-dependent dehydrogenase 13 375 2.0E-123 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 JV59_29090 b0bde7ed75421dbb089c523c77996a60 215 SUPERFAMILY SSF52540 10 200 1.87E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_29090 b0bde7ed75421dbb089c523c77996a60 215 Pfam PF00005 ABC transporter 20 163 9.7E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_29090 b0bde7ed75421dbb089c523c77996a60 215 SMART SM00382 28 212 9.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_29090 b0bde7ed75421dbb089c523c77996a60 215 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_29090 b0bde7ed75421dbb089c523c77996a60 215 Gene3D G3DSA:3.40.50.300 1 207 3.8E-53 T 14-10-2018 JV59_20115 caa4a4d85904b3637aa592ee89054345 99 Pfam PF04175 Protein of unknown function (DUF406) 7 95 1.6E-28 T 14-10-2018 IPR005272 Conserved hypothetical protein CHP00743 JV59_20115 caa4a4d85904b3637aa592ee89054345 99 Gene3D G3DSA:3.30.70.860 1 99 9.4E-40 T 14-10-2018 IPR035571 UPF0234-like, C-terminal JV59_19090 ff833248296babcef9792ec04c8084e9 103 Pfam PF01253 Translation initiation factor SUI1 27 96 1.2E-19 T 14-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 JV59_19090 ff833248296babcef9792ec04c8084e9 103 Gene3D G3DSA:3.30.780.10 23 103 5.9E-33 T 14-10-2018 JV59_19090 ff833248296babcef9792ec04c8084e9 103 SUPERFAMILY SSF55159 3 99 7.59E-27 T 14-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 JV59_19090 ff833248296babcef9792ec04c8084e9 103 PIRSF PIRSF037511 1 103 2.7E-33 T 14-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 JV59_19090 ff833248296babcef9792ec04c8084e9 103 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 3 103 1.4E-38 T 14-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 JV59_02665 f05cd5a7a5d2dee5bf4d29bf175fa041 474 Pfam PF00367 phosphotransferase system, EIIB 11 43 3.9E-14 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 JV59_02665 f05cd5a7a5d2dee5bf4d29bf175fa041 474 Gene3D G3DSA:3.30.1360.60 2 78 2.3E-24 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 JV59_02665 f05cd5a7a5d2dee5bf4d29bf175fa041 474 SUPERFAMILY SSF55604 9 81 3.53E-21 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 JV59_02665 f05cd5a7a5d2dee5bf4d29bf175fa041 474 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 6.6E-16 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 JV59_02665 f05cd5a7a5d2dee5bf4d29bf175fa041 474 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 JV59_02665 f05cd5a7a5d2dee5bf4d29bf175fa041 474 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 7 461 3.3E-205 T 14-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 JV59_02665 f05cd5a7a5d2dee5bf4d29bf175fa041 474 Pfam PF02378 Phosphotransferase system, EIIC 112 404 2.6E-33 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 JV59_23110 e9b638b124bb90d7d730bda7cccde5c7 282 Gene3D G3DSA:3.40.50.300 13 281 1.2E-84 T 14-10-2018 JV59_23110 e9b638b124bb90d7d730bda7cccde5c7 282 Pfam PF00005 ABC transporter 36 191 1.8E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_23110 e9b638b124bb90d7d730bda7cccde5c7 282 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_23110 e9b638b124bb90d7d730bda7cccde5c7 282 SUPERFAMILY SSF52540 15 263 1.94E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_23110 e9b638b124bb90d7d730bda7cccde5c7 282 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 275 2.6E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JV59_23110 e9b638b124bb90d7d730bda7cccde5c7 282 SMART SM00382 44 249 9.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_20435 f7f7924911814126f4aa033737243f91 346 Pfam PF03060 Nitronate monooxygenase 6 342 4.5E-75 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 JV59_20435 f7f7924911814126f4aa033737243f91 346 SUPERFAMILY SSF51412 3 338 7.17E-65 T 14-10-2018 JV59_20435 f7f7924911814126f4aa033737243f91 346 Gene3D G3DSA:3.20.20.70 2 346 3.1E-106 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_28290 3e76b0cbaec5a50c4f2987589c0504ae 164 Pfam PF02810 SEC-C motif 147 164 4.8E-10 T 14-10-2018 IPR004027 SEC-C motif JV59_28290 3e76b0cbaec5a50c4f2987589c0504ae 164 Gene3D G3DSA:3.10.450.50 1 164 4.1E-56 T 14-10-2018 JV59_28290 3e76b0cbaec5a50c4f2987589c0504ae 164 SUPERFAMILY SSF54427 25 127 1.49E-34 T 14-10-2018 IPR032710 NTF2-like domain superfamily JV59_28290 3e76b0cbaec5a50c4f2987589c0504ae 164 SUPERFAMILY SSF103642 144 164 5.23E-8 T 14-10-2018 JV59_19750 f6920839f186d4fbd4a636a835d89d8c 172 SUPERFAMILY SSF141452 3 168 1.57E-38 T 14-10-2018 IPR036624 Hcp1-like superfamily JV59_19750 f6920839f186d4fbd4a636a835d89d8c 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 1.3E-61 T 14-10-2018 IPR008514 Type VI secretion system effector, Hcp JV59_19750 f6920839f186d4fbd4a636a835d89d8c 172 Gene3D G3DSA:2.30.110.20 2 172 1.6E-61 T 14-10-2018 IPR036624 Hcp1-like superfamily JV59_19750 f6920839f186d4fbd4a636a835d89d8c 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 1.9E-29 T 14-10-2018 IPR008514 Type VI secretion system effector, Hcp JV59_29915 c060584fb5e16a8875b92617b42dacd4 179 Gene3D G3DSA:3.40.630.30 2 176 2.7E-34 T 14-10-2018 JV59_29915 c060584fb5e16a8875b92617b42dacd4 179 Pfam PF13302 Acetyltransferase (GNAT) domain 8 144 9.4E-18 T 14-10-2018 IPR000182 GNAT domain JV59_29915 c060584fb5e16a8875b92617b42dacd4 179 SUPERFAMILY SSF55729 6 168 2.42E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_34505 7ef0d12cc9deb87d8dc4c48b8e9eb748 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 9.4E-33 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 JV59_34505 7ef0d12cc9deb87d8dc4c48b8e9eb748 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 1.8E-144 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 JV59_34505 7ef0d12cc9deb87d8dc4c48b8e9eb748 316 Gene3D G3DSA:3.40.47.10 1 316 9.5E-128 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_34505 7ef0d12cc9deb87d8dc4c48b8e9eb748 316 SUPERFAMILY SSF53901 3 315 1.04E-71 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 JV59_34505 7ef0d12cc9deb87d8dc4c48b8e9eb748 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 2.2E-34 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 JV59_34505 7ef0d12cc9deb87d8dc4c48b8e9eb748 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 73.001 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 JV59_31600 c66690c11acc2be59df2f773e795d548 208 Pfam PF01810 LysE type translocator 16 204 1.7E-24 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_31600 c66690c11acc2be59df2f773e795d548 208 PIRSF PIRSF006324 1 207 1.9E-45 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_00385 7d9ad26a53752135ad42cb07642f0fe9 429 Gene3D G3DSA:3.40.50.11060 18 138 8.8E-37 T 14-10-2018 JV59_00385 7d9ad26a53752135ad42cb07642f0fe9 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 9.1E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JV59_00385 7d9ad26a53752135ad42cb07642f0fe9 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 9.1E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JV59_00385 7d9ad26a53752135ad42cb07642f0fe9 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 9.1E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JV59_00385 7d9ad26a53752135ad42cb07642f0fe9 429 SUPERFAMILY SSF52540 197 373 8.25E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_00385 7d9ad26a53752135ad42cb07642f0fe9 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.827 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 JV59_00385 7d9ad26a53752135ad42cb07642f0fe9 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 3.3E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 JV59_00385 7d9ad26a53752135ad42cb07642f0fe9 429 SUPERFAMILY SSF54980 364 428 1.65E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like JV59_00385 7d9ad26a53752135ad42cb07642f0fe9 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.1E-28 T 14-10-2018 IPR032305 GTP-binding protein, middle domain JV59_00385 7d9ad26a53752135ad42cb07642f0fe9 429 PIRSF PIRSF006809 3 423 5.1E-151 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 JV59_00385 7d9ad26a53752135ad42cb07642f0fe9 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 3.7E-156 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 JV59_00385 7d9ad26a53752135ad42cb07642f0fe9 429 Gene3D G3DSA:3.40.50.300 197 370 1.2E-41 T 14-10-2018 JV59_00385 7d9ad26a53752135ad42cb07642f0fe9 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 8.3E-31 T 14-10-2018 IPR025121 GTPase HflX, N-terminal JV59_39095 61a24c4da2695a1ad88d53b2408d0b78 199 Pfam PF11355 Protein of unknown function (DUF3157) 2 198 6.8E-60 T 14-10-2018 IPR021501 Protein of unknown function DUF3157 JV59_36265 83f91c2c9e02f0019f436bc4dfde7dc4 203 Gene3D G3DSA:1.10.10.60 4 61 2.6E-18 T 14-10-2018 JV59_36265 83f91c2c9e02f0019f436bc4dfde7dc4 203 SUPERFAMILY SSF46689 3 74 3.28E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_36265 83f91c2c9e02f0019f436bc4dfde7dc4 203 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 151 201 7.1E-11 T 14-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type JV59_36265 83f91c2c9e02f0019f436bc4dfde7dc4 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 5.8E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_36265 83f91c2c9e02f0019f436bc4dfde7dc4 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 9.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_36265 83f91c2c9e02f0019f436bc4dfde7dc4 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 9.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_36265 83f91c2c9e02f0019f436bc4dfde7dc4 203 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JV59_36265 83f91c2c9e02f0019f436bc4dfde7dc4 203 Gene3D G3DSA:1.10.357.10 63 203 1.3E-25 T 14-10-2018 JV59_35365 6b8ea631176eb79e3c816b127903a098 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 5.9E-115 T 14-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 JV59_35365 6b8ea631176eb79e3c816b127903a098 258 PIRSF PIRSF029037 1 258 1.3E-116 T 14-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 JV59_28650 0fd1cd575add8c4129cff10b4399b430 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 66.137 T 14-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 JV59_28650 0fd1cd575add8c4129cff10b4399b430 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 31 341 6.3E-114 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 JV59_28650 0fd1cd575add8c4129cff10b4399b430 353 Pfam PF02445 Quinolinate synthetase A protein 32 340 1.8E-101 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 JV59_28650 0fd1cd575add8c4129cff10b4399b430 353 SUPERFAMILY SSF142754 29 341 2.09E-105 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 JV59_28650 0fd1cd575add8c4129cff10b4399b430 353 Gene3D G3DSA:3.40.50.10800 31 322 9.4E-94 T 14-10-2018 JV59_28650 0fd1cd575add8c4129cff10b4399b430 353 Gene3D G3DSA:3.40.50.10800 200 295 9.4E-94 T 14-10-2018 JV59_28650 0fd1cd575add8c4129cff10b4399b430 353 Gene3D G3DSA:3.40.50.10800 115 340 9.4E-94 T 14-10-2018 JV59_26870 024d250e3a7fe66d60a8b925075a9a7f 242 Gene3D G3DSA:3.40.50.10490 8 219 2.6E-91 T 14-10-2018 JV59_26870 024d250e3a7fe66d60a8b925075a9a7f 242 Pfam PF00318 Ribosomal protein S2 9 224 2.0E-93 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26870 024d250e3a7fe66d60a8b925075a9a7f 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.078 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26870 024d250e3a7fe66d60a8b925075a9a7f 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 7.7E-108 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26870 024d250e3a7fe66d60a8b925075a9a7f 242 Gene3D G3DSA:1.10.287.610 103 150 2.6E-91 T 14-10-2018 JV59_26870 024d250e3a7fe66d60a8b925075a9a7f 242 SUPERFAMILY SSF52313 6 232 7.46E-95 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily JV59_26870 024d250e3a7fe66d60a8b925075a9a7f 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 JV59_26870 024d250e3a7fe66d60a8b925075a9a7f 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 JV59_26870 024d250e3a7fe66d60a8b925075a9a7f 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 3.2E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26870 024d250e3a7fe66d60a8b925075a9a7f 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 3.2E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26870 024d250e3a7fe66d60a8b925075a9a7f 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 3.2E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26870 024d250e3a7fe66d60a8b925075a9a7f 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 3.2E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26870 024d250e3a7fe66d60a8b925075a9a7f 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 3.2E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26870 024d250e3a7fe66d60a8b925075a9a7f 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 3.2E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_30770 155f00b5da8ae9e0c495b19166a1a830 170 Gene3D G3DSA:3.90.1720.10 42 166 9.2E-41 T 14-10-2018 JV59_30770 155f00b5da8ae9e0c495b19166a1a830 170 SUPERFAMILY SSF54001 41 163 4.58E-41 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily JV59_30770 155f00b5da8ae9e0c495b19166a1a830 170 Pfam PF00877 NlpC/P60 family 58 162 2.1E-29 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain JV59_36085 9a457fdcababa0058ec8b0e8570eee0c 319 SUPERFAMILY SSF53850 33 311 1.83E-66 T 14-10-2018 JV59_36085 9a457fdcababa0058ec8b0e8570eee0c 319 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 3 303 1.6E-77 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 JV59_36085 9a457fdcababa0058ec8b0e8570eee0c 319 Pfam PF12849 PBP superfamily domain 35 289 9.1E-30 T 14-10-2018 IPR024370 PBP domain JV59_36085 9a457fdcababa0058ec8b0e8570eee0c 319 Gene3D G3DSA:3.40.190.10 34 305 3.7E-100 T 14-10-2018 JV59_36085 9a457fdcababa0058ec8b0e8570eee0c 319 Gene3D G3DSA:3.40.190.10 119 261 3.7E-100 T 14-10-2018 JV59_25785 dc2bfba2b9b50618299f084cc4fa8a3d 323 Pfam PF00512 His Kinase A (phospho-acceptor) domain 62 154 1.5E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_25785 dc2bfba2b9b50618299f084cc4fa8a3d 323 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 203 313 1.0E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_25785 dc2bfba2b9b50618299f084cc4fa8a3d 323 SUPERFAMILY SSF55874 160 312 6.42E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_25785 dc2bfba2b9b50618299f084cc4fa8a3d 323 PRINTS PR00344 Bacterial sensor protein C-terminal signature 298 311 1.0E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_25785 dc2bfba2b9b50618299f084cc4fa8a3d 323 PRINTS PR00344 Bacterial sensor protein C-terminal signature 243 257 1.0E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_25785 dc2bfba2b9b50618299f084cc4fa8a3d 323 PRINTS PR00344 Bacterial sensor protein C-terminal signature 261 271 1.0E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_25785 dc2bfba2b9b50618299f084cc4fa8a3d 323 PRINTS PR00344 Bacterial sensor protein C-terminal signature 274 292 1.0E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_25785 dc2bfba2b9b50618299f084cc4fa8a3d 323 SUPERFAMILY SSF47384 56 94 7.06E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_25785 dc2bfba2b9b50618299f084cc4fa8a3d 323 Gene3D G3DSA:1.10.287.130 39 155 4.6E-24 T 14-10-2018 JV59_25785 dc2bfba2b9b50618299f084cc4fa8a3d 323 Gene3D G3DSA:3.30.565.10 162 319 3.3E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_25785 dc2bfba2b9b50618299f084cc4fa8a3d 323 SMART SM00387 202 314 1.5E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_24520 5809a9c4989cc1e4bd09b8a8d181ed14 165 Gene3D G3DSA:3.40.630.30 1 145 2.1E-9 T 14-10-2018 JV59_24520 5809a9c4989cc1e4bd09b8a8d181ed14 165 SUPERFAMILY SSF55729 40 134 1.12E-11 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_24520 5809a9c4989cc1e4bd09b8a8d181ed14 165 Pfam PF00583 Acetyltransferase (GNAT) family 45 132 4.7E-7 T 14-10-2018 IPR000182 GNAT domain JV59_31145 efe82a35f1b5dbcb23522a8511eb005c 216 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 10 211 6.4E-86 T 14-10-2018 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 JV59_31145 efe82a35f1b5dbcb23522a8511eb005c 216 Pfam PF00813 FliP family 14 211 1.3E-62 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_31145 efe82a35f1b5dbcb23522a8511eb005c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 186 2.4E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_31145 efe82a35f1b5dbcb23522a8511eb005c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 189 214 2.4E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_31145 efe82a35f1b5dbcb23522a8511eb005c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 30 50 2.4E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_31145 efe82a35f1b5dbcb23522a8511eb005c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 2.4E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_31145 efe82a35f1b5dbcb23522a8511eb005c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 11 30 2.4E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_31145 efe82a35f1b5dbcb23522a8511eb005c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 144 164 2.4E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_31145 efe82a35f1b5dbcb23522a8511eb005c 216 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 192 204 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_01395 87a0964a84f6811a0b6a7b04c0b7fff3 247 PIRSF PIRSF000386 1 246 1.2E-100 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 JV59_01395 87a0964a84f6811a0b6a7b04c0b7fff3 247 Gene3D G3DSA:1.10.1270.20 161 247 4.1E-33 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 JV59_01395 87a0964a84f6811a0b6a7b04c0b7fff3 247 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 233 1.5E-108 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 JV59_01395 87a0964a84f6811a0b6a7b04c0b7fff3 247 Gene3D G3DSA:3.40.1280.10 1 160 2.9E-67 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JV59_01395 87a0964a84f6811a0b6a7b04c0b7fff3 247 SUPERFAMILY SSF75217 1 245 8.5E-102 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases JV59_01395 87a0964a84f6811a0b6a7b04c0b7fff3 247 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 6.0E-70 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 JV59_01395 87a0964a84f6811a0b6a7b04c0b7fff3 247 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 247 117.389 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 JV59_29890 a96c2319abfd917ed3ffef62b667aab0 592 Pfam PF00563 EAL domain 338 571 2.4E-70 T 14-10-2018 IPR001633 EAL domain JV59_29890 a96c2319abfd917ed3ffef62b667aab0 592 SMART SM00267 153 321 2.4E-29 T 14-10-2018 IPR000160 GGDEF domain JV59_29890 a96c2319abfd917ed3ffef62b667aab0 592 SUPERFAMILY SSF141868 337 580 6.28E-88 T 14-10-2018 IPR035919 EAL domain superfamily JV59_29890 a96c2319abfd917ed3ffef62b667aab0 592 SUPERFAMILY SSF55073 168 323 2.51E-31 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_29890 a96c2319abfd917ed3ffef62b667aab0 592 SMART SM00052 331 576 1.0E-104 T 14-10-2018 IPR001633 EAL domain JV59_29890 a96c2319abfd917ed3ffef62b667aab0 592 Pfam PF00990 Diguanylate cyclase, GGDEF domain 164 315 2.2E-27 T 14-10-2018 IPR000160 GGDEF domain JV59_29890 a96c2319abfd917ed3ffef62b667aab0 592 Gene3D G3DSA:3.20.20.450 335 584 3.1E-98 T 14-10-2018 IPR035919 EAL domain superfamily JV59_29890 a96c2319abfd917ed3ffef62b667aab0 592 Gene3D G3DSA:3.30.70.270 159 334 7.3E-36 T 14-10-2018 JV59_29890 a96c2319abfd917ed3ffef62b667aab0 592 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 161 318 2.8E-23 T 14-10-2018 IPR000160 GGDEF domain JV59_20275 d1d1fe938d7d229c225991b6a780dbbd 587 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 489 498 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site JV59_20275 d1d1fe938d7d229c225991b6a780dbbd 587 SUPERFAMILY SSF46689 489 583 5.38E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_20275 d1d1fe938d7d229c225991b6a780dbbd 587 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 367 382 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JV59_20275 d1d1fe938d7d229c225991b6a780dbbd 587 Pfam PF00158 Sigma-54 interaction domain 284 447 1.2E-60 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JV59_20275 d1d1fe938d7d229c225991b6a780dbbd 587 Gene3D G3DSA:3.40.50.300 267 452 1.4E-56 T 14-10-2018 JV59_20275 d1d1fe938d7d229c225991b6a780dbbd 587 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 304 317 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JV59_20275 d1d1fe938d7d229c225991b6a780dbbd 587 SUPERFAMILY SSF52540 284 519 2.01E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_20275 d1d1fe938d7d229c225991b6a780dbbd 587 Gene3D G3DSA:1.10.10.60 542 586 3.6E-8 T 14-10-2018 JV59_20275 d1d1fe938d7d229c225991b6a780dbbd 587 Gene3D G3DSA:1.10.8.60 455 528 1.8E-12 T 14-10-2018 JV59_20275 d1d1fe938d7d229c225991b6a780dbbd 587 Pfam PF02954 Bacterial regulatory protein, Fis family 555 580 2.0E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JV59_20275 d1d1fe938d7d229c225991b6a780dbbd 587 SMART SM00382 300 444 1.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_20275 d1d1fe938d7d229c225991b6a780dbbd 587 Gene3D G3DSA:3.30.450.40 2 188 7.7E-43 T 14-10-2018 IPR029016 GAF-like domain superfamily JV59_20275 d1d1fe938d7d229c225991b6a780dbbd 587 Pfam PF01590 GAF domain 78 182 4.2E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 JV59_27985 c3777a686df789a1d04f3912bc5c4f1e 201 Gene3D G3DSA:3.40.50.300 11 201 8.5E-70 T 14-10-2018 JV59_27985 c3777a686df789a1d04f3912bc5c4f1e 201 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 5 26 4.0E-6 T 14-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 JV59_27985 c3777a686df789a1d04f3912bc5c4f1e 201 SUPERFAMILY SSF52540 12 201 7.79E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_27985 c3777a686df789a1d04f3912bc5c4f1e 201 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 32 201 1.4E-58 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 JV59_27985 c3777a686df789a1d04f3912bc5c4f1e 201 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 201 2.1E-68 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 JV59_27985 c3777a686df789a1d04f3912bc5c4f1e 201 PIRSF PIRSF015617 6 201 5.4E-66 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 JV59_27880 73328a5c7385dc358c5847b4f1ddc51c 295 SUPERFAMILY SSF142338 7 289 5.36E-82 T 14-10-2018 JV59_27880 73328a5c7385dc358c5847b4f1ddc51c 295 Pfam PF01933 Uncharacterised protein family UPF0052 9 256 4.2E-73 T 14-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 JV59_27880 73328a5c7385dc358c5847b4f1ddc51c 295 Gene3D G3DSA:3.40.50.12300 5 295 6.7E-77 T 14-10-2018 IPR038136 Gluconeogenesis factor superfamily JV59_27880 73328a5c7385dc358c5847b4f1ddc51c 295 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 260 6.5E-100 T 14-10-2018 IPR010119 Gluconeogenesis factor JV59_27880 73328a5c7385dc358c5847b4f1ddc51c 295 Hamap MF_00973 Gluconeogenesis factor. 5 295 29.996 T 14-10-2018 IPR010119 Gluconeogenesis factor JV59_32615 4ea9126eeacd9b46f27bf65dec766395 171 Gene3D G3DSA:3.40.630.30 11 149 5.0E-19 T 14-10-2018 JV59_32615 4ea9126eeacd9b46f27bf65dec766395 171 Pfam PF13302 Acetyltransferase (GNAT) domain 60 148 7.8E-9 T 14-10-2018 IPR000182 GNAT domain JV59_32615 4ea9126eeacd9b46f27bf65dec766395 171 SUPERFAMILY SSF55729 1 157 6.2E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_31060 0194d11213d8a39fac20b0b4d95f1d46 286 Gene3D G3DSA:1.10.3720.10 7 278 2.3E-53 T 14-10-2018 IPR035906 MetI-like superfamily JV59_31060 0194d11213d8a39fac20b0b4d95f1d46 286 SUPERFAMILY SSF161098 10 275 7.46E-55 T 14-10-2018 IPR035906 MetI-like superfamily JV59_31060 0194d11213d8a39fac20b0b4d95f1d46 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 283 8.2E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_01445 316f4ccf5cdc3325b00035b071d9749b 181 SUPERFAMILY SSF55846 2 179 1.83E-65 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 JV59_01445 316f4ccf5cdc3325b00035b071d9749b 181 Gene3D G3DSA:3.40.80.10 2 181 1.5E-54 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 JV59_01445 316f4ccf5cdc3325b00035b071d9749b 181 SMART SM00644 16 167 6.6E-50 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 JV59_01445 316f4ccf5cdc3325b00035b071d9749b 181 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 27 167 3.2E-27 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 JV59_32765 490619db1c7977909a119ab8dd1c2c5b 324 PIRSF PIRSF034367 1 324 4.8E-196 T 14-10-2018 IPR015004 Protein of unknown function DUF1852 JV59_32765 490619db1c7977909a119ab8dd1c2c5b 324 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 1.7E-185 T 14-10-2018 IPR015004 Protein of unknown function DUF1852 JV59_35915 93f4d681b8fc6e20e179815f307bac91 288 SUPERFAMILY SSF55186 118 269 8.89E-15 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 JV59_35915 93f4d681b8fc6e20e179815f307bac91 288 Gene3D G3DSA:3.30.980.10 118 282 4.1E-7 T 14-10-2018 JV59_40055 90bb80a3960c36b98ac039145c7169a0 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_40055 90bb80a3960c36b98ac039145c7169a0 333 PIRSF PIRSF000149 1 331 2.7E-116 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_40055 90bb80a3960c36b98ac039145c7169a0 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 2.7E-59 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_40055 90bb80a3960c36b98ac039145c7169a0 333 SMART SM00846 3 152 4.0E-73 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_40055 90bb80a3960c36b98ac039145c7169a0 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 9.8E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_40055 90bb80a3960c36b98ac039145c7169a0 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 9.8E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_40055 90bb80a3960c36b98ac039145c7169a0 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 9.8E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_40055 90bb80a3960c36b98ac039145c7169a0 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 9.8E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_40055 90bb80a3960c36b98ac039145c7169a0 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 9.8E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_40055 90bb80a3960c36b98ac039145c7169a0 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 101 2.9E-33 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_40055 90bb80a3960c36b98ac039145c7169a0 333 Gene3D G3DSA:3.40.50.720 4 327 3.6E-127 T 14-10-2018 JV59_40055 90bb80a3960c36b98ac039145c7169a0 333 SUPERFAMILY SSF51735 1 173 2.76E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_40055 90bb80a3960c36b98ac039145c7169a0 333 SUPERFAMILY SSF55347 152 314 1.34E-62 T 14-10-2018 JV59_40055 90bb80a3960c36b98ac039145c7169a0 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 3.8E-120 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JV59_40055 90bb80a3960c36b98ac039145c7169a0 333 Gene3D G3DSA:3.30.360.10 151 315 3.6E-127 T 14-10-2018 JV59_23900 3b08e9e5be99352225b1bc99fd2c05ab 261 Pfam PF13489 Methyltransferase domain 26 215 1.9E-16 T 14-10-2018 JV59_23900 3b08e9e5be99352225b1bc99fd2c05ab 261 SUPERFAMILY SSF53335 28 226 1.69E-25 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_23900 3b08e9e5be99352225b1bc99fd2c05ab 261 Gene3D G3DSA:3.40.50.150 32 226 5.2E-26 T 14-10-2018 JV59_24825 5aeb41f149353971a4d7b4145dffd2ef 265 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_24825 5aeb41f149353971a4d7b4145dffd2ef 265 Gene3D G3DSA:3.40.50.300 3 252 8.7E-58 T 14-10-2018 JV59_24825 5aeb41f149353971a4d7b4145dffd2ef 265 Pfam PF00005 ABC transporter 20 165 3.5E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_24825 5aeb41f149353971a4d7b4145dffd2ef 265 SMART SM00382 28 215 1.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_24825 5aeb41f149353971a4d7b4145dffd2ef 265 SUPERFAMILY SSF52540 4 227 5.55E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_31325 5837b18cbcedb3f0c1f0df9088fada1d 1241 SUPERFAMILY SSF56568 28 114 1.18E-15 T 14-10-2018 IPR011070 Globular protein, non-globular alpha/beta subunit JV59_31325 5837b18cbcedb3f0c1f0df9088fada1d 1241 Gene3D G3DSA:4.10.1330.10 27 130 6.4E-27 T 14-10-2018 JV59_31325 5837b18cbcedb3f0c1f0df9088fada1d 1241 Pfam PF09119 SicP binding 35 111 1.1E-9 T 14-10-2018 IPR015203 SicP binding GO:0005615 JV59_22810 5244bfb7e6c210d780405a172e503170 287 SUPERFAMILY SSF53697 97 259 4.31E-37 T 14-10-2018 JV59_22810 5244bfb7e6c210d780405a172e503170 287 Gene3D G3DSA:3.40.50.10490 94 273 6.2E-40 T 14-10-2018 JV59_22810 5244bfb7e6c210d780405a172e503170 287 SUPERFAMILY SSF46689 5 79 3.58E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_22810 5244bfb7e6c210d780405a172e503170 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 78 1.3E-15 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 JV59_22810 5244bfb7e6c210d780405a172e503170 287 Pfam PF01380 SIS domain 124 250 5.7E-17 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 JV59_22810 5244bfb7e6c210d780405a172e503170 287 Gene3D G3DSA:1.10.10.10 3 79 1.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_02210 ffcbdd1b6aa858d96666a8b5d85f7a55 403 PIRSF PIRSF005572 21 403 1.0E-50 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 JV59_02210 ffcbdd1b6aa858d96666a8b5d85f7a55 403 SUPERFAMILY SSF53383 3 400 2.39E-121 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_02210 ffcbdd1b6aa858d96666a8b5d85f7a55 403 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 402 7.1E-169 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 JV59_02210 ffcbdd1b6aa858d96666a8b5d85f7a55 403 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 403 2.2E-160 T 14-10-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 JV59_02210 ffcbdd1b6aa858d96666a8b5d85f7a55 403 Pfam PF00266 Aminotransferase class-V 24 392 7.9E-149 T 14-10-2018 IPR000192 Aminotransferase class V domain JV59_02210 ffcbdd1b6aa858d96666a8b5d85f7a55 403 Gene3D G3DSA:3.90.1150.10 7 395 4.6E-165 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_02210 ffcbdd1b6aa858d96666a8b5d85f7a55 403 Gene3D G3DSA:3.40.640.10 35 295 4.6E-165 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_16810 800ab9f7cbd293ce29caf944ab339ba4 504 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 425 5.7E-57 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain JV59_16810 800ab9f7cbd293ce29caf944ab339ba4 504 SUPERFAMILY SSF53850 34 491 3.26E-88 T 14-10-2018 JV59_16810 800ab9f7cbd293ce29caf944ab339ba4 504 PIRSF PIRSF002741 3 498 1.1E-58 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 JV59_16810 800ab9f7cbd293ce29caf944ab339ba4 504 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 108 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site JV59_16810 800ab9f7cbd293ce29caf944ab339ba4 504 Gene3D G3DSA:3.40.190.10 73 487 5.1E-83 T 14-10-2018 JV59_16810 800ab9f7cbd293ce29caf944ab339ba4 504 Gene3D G3DSA:3.10.105.10 267 475 5.1E-83 T 14-10-2018 JV59_30825 8a1547457683d3808ab4125edb16ac14 195 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 190 29.425 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 JV59_30825 8a1547457683d3808ab4125edb16ac14 195 SUPERFAMILY SSF53448 7 189 2.72E-35 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_30825 8a1547457683d3808ab4125edb16ac14 195 Gene3D G3DSA:3.90.550.10 4 192 2.8E-57 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_30825 8a1547457683d3808ab4125edb16ac14 195 Pfam PF12804 MobA-like NTP transferase domain 10 158 2.0E-33 T 14-10-2018 IPR025877 MobA-like NTP transferase JV59_30825 8a1547457683d3808ab4125edb16ac14 195 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 8 188 3.0E-71 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 JV59_22060 0d60400620505ed4fa29a787e796d311 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 3.2E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_22060 0d60400620505ed4fa29a787e796d311 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 3.2E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_22060 0d60400620505ed4fa29a787e796d311 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 3.2E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_22060 0d60400620505ed4fa29a787e796d311 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 3.2E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_22060 0d60400620505ed4fa29a787e796d311 229 Gene3D G3DSA:3.40.50.720 2 229 3.0E-62 T 14-10-2018 JV59_22060 0d60400620505ed4fa29a787e796d311 229 SUPERFAMILY SSF51735 1 229 1.09E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_22060 0d60400620505ed4fa29a787e796d311 229 Pfam PF00106 short chain dehydrogenase 3 191 3.8E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_25545 cf865c6c8cf5d27d03a4fd9a7fb0346f 361 SUPERFAMILY SSF56349 151 356 2.3E-31 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JV59_25545 cf865c6c8cf5d27d03a4fd9a7fb0346f 361 Pfam PF00589 Phage integrase family 165 346 5.0E-17 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JV59_25545 cf865c6c8cf5d27d03a4fd9a7fb0346f 361 SUPERFAMILY SSF47823 45 146 1.92E-23 T 14-10-2018 JV59_25545 cf865c6c8cf5d27d03a4fd9a7fb0346f 361 Gene3D G3DSA:1.10.150.130 38 148 2.5E-21 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal JV59_25545 cf865c6c8cf5d27d03a4fd9a7fb0346f 361 Gene3D G3DSA:1.10.443.10 150 348 1.4E-44 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JV59_34040 b7fa7f35bc13affde2ffc4edd94bb2ca 480 Gene3D G3DSA:2.40.10.10 305 372 5.7E-7 T 14-10-2018 JV59_34040 b7fa7f35bc13affde2ffc4edd94bb2ca 480 Pfam PF13365 Trypsin-like peptidase domain 180 339 2.0E-10 T 14-10-2018 JV59_34040 b7fa7f35bc13affde2ffc4edd94bb2ca 480 SUPERFAMILY SSF50494 144 358 4.88E-25 T 14-10-2018 IPR009003 Peptidase S1, PA clan JV59_34040 b7fa7f35bc13affde2ffc4edd94bb2ca 480 Gene3D G3DSA:2.40.10.10 170 301 2.1E-7 T 14-10-2018 JV59_34040 b7fa7f35bc13affde2ffc4edd94bb2ca 480 Gene3D G3DSA:2.60.120.380 380 478 1.9E-27 T 14-10-2018 JV59_19860 c561dc4a370177da7239ad11a8b662ba 316 Gene3D G3DSA:1.10.3470.10 4 315 1.3E-57 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JV59_19860 c561dc4a370177da7239ad11a8b662ba 316 SUPERFAMILY SSF81345 7 313 3.92E-58 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JV59_19860 c561dc4a370177da7239ad11a8b662ba 316 Pfam PF01032 FecCD transport family 27 312 1.0E-51 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 JV59_31995 12b3929b4190b64e4aa2f620f500b1bf 172 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 27 162 7.7E-17 T 14-10-2018 IPR009936 Protein of unknown function DUF1468 JV59_25065 081067b5e2976a94ab8caca97e62c449 133 Pfam PF13673 Acetyltransferase (GNAT) domain 27 88 1.0E-8 T 14-10-2018 IPR000182 GNAT domain JV59_25065 081067b5e2976a94ab8caca97e62c449 133 Gene3D G3DSA:3.40.630.30 2 97 1.6E-12 T 14-10-2018 JV59_25065 081067b5e2976a94ab8caca97e62c449 133 SUPERFAMILY SSF55729 9 94 1.49E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_21245 99b46e5541a422c5b5e1c5472b910c65 570 Gene3D G3DSA:1.10.1400.10 323 454 1.1E-137 T 14-10-2018 JV59_21245 99b46e5541a422c5b5e1c5472b910c65 570 SUPERFAMILY SSF56235 17 569 7.97E-139 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JV59_21245 99b46e5541a422c5b5e1c5472b910c65 570 Gene3D G3DSA:2.30.120.10 100 170 1.1E-137 T 14-10-2018 JV59_21245 99b46e5541a422c5b5e1c5472b910c65 570 Pfam PF01804 Penicillin amidase 21 558 1.7E-137 T 14-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 JV59_21245 99b46e5541a422c5b5e1c5472b910c65 570 Gene3D G3DSA:3.60.20.10 28 545 1.1E-137 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JV59_21245 99b46e5541a422c5b5e1c5472b910c65 570 PIRSF PIRSF001227 4 570 9.6E-123 T 14-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 JV59_29075 6b58a93068d2a24c17d2840ae528d6bc 231 SUPERFAMILY SSF55120 2 197 2.4E-47 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_29075 6b58a93068d2a24c17d2840ae528d6bc 231 Gene3D G3DSA:3.30.2350.10 1 195 3.4E-49 T 14-10-2018 JV59_29075 6b58a93068d2a24c17d2840ae528d6bc 231 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 220 2.4E-107 T 14-10-2018 IPR006508 Pseudouridine synthase, RluA-like JV59_29075 6b58a93068d2a24c17d2840ae528d6bc 231 Pfam PF00849 RNA pseudouridylate synthase 10 153 9.3E-27 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_29075 6b58a93068d2a24c17d2840ae528d6bc 231 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_34535 9e604b93823498058ebb1e8614a9ae43 975 Hamap MF_00970 Ribonuclease E [rne]. 1 960 35.601 T 14-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 JV59_34535 9e604b93823498058ebb1e8614a9ae43 975 SUPERFAMILY SSF50249 40 124 3.75E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_34535 9e604b93823498058ebb1e8614a9ae43 975 Gene3D G3DSA:2.40.50.140 32 125 3.7E-32 T 14-10-2018 JV59_34535 9e604b93823498058ebb1e8614a9ae43 975 Gene3D G3DSA:3.40.1260.20 400 508 1.0E-38 T 14-10-2018 JV59_34535 9e604b93823498058ebb1e8614a9ae43 975 Pfam PF00575 S1 RNA binding domain 37 118 4.8E-14 T 14-10-2018 IPR003029 S1 domain GO:0003676 JV59_34535 9e604b93823498058ebb1e8614a9ae43 975 SMART SM00316 37 119 1.1E-10 T 14-10-2018 IPR022967 RNA-binding domain, S1 JV59_34535 9e604b93823498058ebb1e8614a9ae43 975 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 9.1E-170 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 JV59_34535 9e604b93823498058ebb1e8614a9ae43 975 Pfam PF10150 Ribonuclease E/G family 121 390 2.2E-93 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 JV59_16955 a83f21e1572a28c4313e619d58f4daad 204 SUPERFAMILY SSF56529 12 187 1.03E-45 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 JV59_16955 a83f21e1572a28c4313e619d58f4daad 204 Gene3D G3DSA:3.90.850.10 9 204 1.3E-47 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 JV59_16955 a83f21e1572a28c4313e619d58f4daad 204 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 186 2.9E-28 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 JV59_37355 e36f67eecb8158c857ea03c74da7be4c 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 1.6E-33 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 JV59_37355 e36f67eecb8158c857ea03c74da7be4c 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 1.2E-36 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JV59_37355 e36f67eecb8158c857ea03c74da7be4c 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 1.2E-36 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JV59_37355 e36f67eecb8158c857ea03c74da7be4c 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 1.2E-36 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JV59_37355 e36f67eecb8158c857ea03c74da7be4c 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 1.2E-36 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JV59_37355 e36f67eecb8158c857ea03c74da7be4c 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 1.2E-36 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JV59_37355 e36f67eecb8158c857ea03c74da7be4c 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 1.2E-36 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JV59_37355 e36f67eecb8158c857ea03c74da7be4c 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JV59_37355 e36f67eecb8158c857ea03c74da7be4c 309 Gene3D G3DSA:3.40.50.1370 8 304 7.2E-121 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JV59_37355 e36f67eecb8158c857ea03c74da7be4c 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 4.8E-116 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JV59_37355 e36f67eecb8158c857ea03c74da7be4c 309 SUPERFAMILY SSF53671 4 306 4.32E-102 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JV59_37355 e36f67eecb8158c857ea03c74da7be4c 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 1.8E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JV59_37355 e36f67eecb8158c857ea03c74da7be4c 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 1.8E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JV59_37355 e36f67eecb8158c857ea03c74da7be4c 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.8E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JV59_37355 e36f67eecb8158c857ea03c74da7be4c 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 1.8E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JV59_37355 e36f67eecb8158c857ea03c74da7be4c 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 2.5E-44 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 JV59_37355 e36f67eecb8158c857ea03c74da7be4c 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.5 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JV59_37355 e36f67eecb8158c857ea03c74da7be4c 309 Gene3D G3DSA:3.40.50.1370 135 292 7.2E-121 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JV59_20410 d2ebaba56cda7ca614ffeaaaac32ea5a 542 Pfam PF04231 Endonuclease I 298 534 3.2E-102 T 14-10-2018 IPR007346 Endonuclease I GO:0004518 JV59_20410 d2ebaba56cda7ca614ffeaaaac32ea5a 542 Gene3D G3DSA:2.60.120.260 25 167 1.0E-15 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily JV59_20410 d2ebaba56cda7ca614ffeaaaac32ea5a 542 SUPERFAMILY SSF54060 295 534 2.71E-48 T 14-10-2018 JV59_20410 d2ebaba56cda7ca614ffeaaaac32ea5a 542 SUPERFAMILY SSF49785 26 165 2.38E-18 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily JV59_20410 d2ebaba56cda7ca614ffeaaaac32ea5a 542 Pfam PF02018 Carbohydrate binding domain 26 145 1.6E-7 T 14-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 JV59_38500 276212fa07bfaf5245f048dcaed2fca5 257 Pfam PF02522 Aminoglycoside 3-N-acetyltransferase 41 241 4.0E-27 T 14-10-2018 IPR003679 Aminoglycoside N(3)-acetyltransferase GO:0046353|GO:0046677 JV59_38500 276212fa07bfaf5245f048dcaed2fca5 257 SUPERFAMILY SSF110710 4 251 4.71E-49 T 14-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like JV59_31100 95663fc75f1eae36c23bc76d5fda8101 54 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 49 1.2E-17 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type JV59_31100 95663fc75f1eae36c23bc76d5fda8101 54 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 1.3E-21 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type JV59_32175 0b77db380c8fa7083d1513a824aaaa3c 750 Pfam PF11185 Protein of unknown function (DUF2971) 599 665 5.0E-5 T 14-10-2018 IPR021352 Protein of unknown function DUF2971 JV59_32175 0b77db380c8fa7083d1513a824aaaa3c 750 SUPERFAMILY SSF48452 353 482 2.01E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_32175 0b77db380c8fa7083d1513a824aaaa3c 750 SMART SM00028 447 480 6.0E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_32175 0b77db380c8fa7083d1513a824aaaa3c 750 SMART SM00028 66 103 170.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_32175 0b77db380c8fa7083d1513a824aaaa3c 750 Gene3D G3DSA:1.25.40.10 429 542 2.1E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_29055 5cc5600dac007ffcca0a96615d215dbb 311 Pfam PF00561 alpha/beta hydrolase fold 35 140 2.4E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_29055 5cc5600dac007ffcca0a96615d215dbb 311 SUPERFAMILY SSF53474 31 307 1.52E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_29055 5cc5600dac007ffcca0a96615d215dbb 311 Gene3D G3DSA:3.40.50.1820 27 311 7.7E-88 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_33045 7ce0fded3d603d124e2f3092fa16903c 202 Pfam PF00293 NUDIX domain 48 157 8.2E-12 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JV59_33045 7ce0fded3d603d124e2f3092fa16903c 202 SUPERFAMILY SSF55811 36 192 5.69E-32 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JV59_33045 7ce0fded3d603d124e2f3092fa16903c 202 Gene3D G3DSA:3.90.79.10 8 197 3.2E-46 T 14-10-2018 JV59_36870 960154c08d4fbc68c551b3d4d3d1dd9b 536 SMART SM00382 42 195 4.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_36870 960154c08d4fbc68c551b3d4d3d1dd9b 536 Pfam PF01471 Putative peptidoglycan binding domain 462 518 6.3E-9 T 14-10-2018 IPR002477 Peptidoglycan binding-like JV59_36870 960154c08d4fbc68c551b3d4d3d1dd9b 536 Gene3D G3DSA:3.40.50.300 26 184 9.4E-15 T 14-10-2018 JV59_36870 960154c08d4fbc68c551b3d4d3d1dd9b 536 SUPERFAMILY SSF47090 452 520 1.46E-12 T 14-10-2018 IPR036365 PGBD-like superfamily JV59_36870 960154c08d4fbc68c551b3d4d3d1dd9b 536 Gene3D G3DSA:1.10.101.10 456 522 1.3E-19 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 JV59_36870 960154c08d4fbc68c551b3d4d3d1dd9b 536 Pfam PF13401 AAA domain 42 171 1.4E-22 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_36870 960154c08d4fbc68c551b3d4d3d1dd9b 536 Gene3D G3DSA:3.90.70.10 339 455 4.9E-31 T 14-10-2018 JV59_36870 960154c08d4fbc68c551b3d4d3d1dd9b 536 SUPERFAMILY SSF52540 5 263 1.52E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_34360 214ae628edd1f5f3f2a9a00cb4f2dad3 950 Gene3D G3DSA:3.10.50.10 386 468 4.6E-120 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily JV59_34360 214ae628edd1f5f3f2a9a00cb4f2dad3 950 SUPERFAMILY SSF51055 851 901 1.26E-7 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_34360 214ae628edd1f5f3f2a9a00cb4f2dad3 950 SUPERFAMILY SSF49299 754 835 1.24E-6 T 14-10-2018 IPR035986 PKD domain superfamily JV59_34360 214ae628edd1f5f3f2a9a00cb4f2dad3 950 Gene3D G3DSA:2.60.40.10 548 652 6.0E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_34360 214ae628edd1f5f3f2a9a00cb4f2dad3 950 Gene3D G3DSA:2.60.40.10 653 752 3.6E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_34360 214ae628edd1f5f3f2a9a00cb4f2dad3 950 SUPERFAMILY SSF54556 394 465 1.19E-6 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily JV59_34360 214ae628edd1f5f3f2a9a00cb4f2dad3 950 Gene3D G3DSA:2.10.10.20 855 899 6.9E-8 T 14-10-2018 JV59_34360 214ae628edd1f5f3f2a9a00cb4f2dad3 950 SMART SM00636 67 495 1.0E-59 T 14-10-2018 IPR011583 Chitinase II GO:0008061 JV59_34360 214ae628edd1f5f3f2a9a00cb4f2dad3 950 Gene3D G3DSA:3.20.20.80 58 522 4.6E-120 T 14-10-2018 JV59_34360 214ae628edd1f5f3f2a9a00cb4f2dad3 950 Gene3D G3DSA:2.10.10.20 903 950 2.8E-5 T 14-10-2018 JV59_34360 214ae628edd1f5f3f2a9a00cb4f2dad3 950 SMART SM00495 855 899 9.3E-7 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_34360 214ae628edd1f5f3f2a9a00cb4f2dad3 950 SMART SM00495 903 946 0.015 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_34360 214ae628edd1f5f3f2a9a00cb4f2dad3 950 SUPERFAMILY SSF51055 905 949 1.96E-5 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_34360 214ae628edd1f5f3f2a9a00cb4f2dad3 950 Gene3D G3DSA:2.60.40.10 755 836 3.3E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_34360 214ae628edd1f5f3f2a9a00cb4f2dad3 950 Pfam PF00704 Glycosyl hydrolases family 18 69 495 4.5E-65 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 JV59_34360 214ae628edd1f5f3f2a9a00cb4f2dad3 950 SUPERFAMILY SSF51445 67 497 2.53E-63 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_34360 214ae628edd1f5f3f2a9a00cb4f2dad3 950 SMART SM00089 555 647 3.0 T 14-10-2018 IPR022409 PKD/Chitinase domain JV59_34360 214ae628edd1f5f3f2a9a00cb4f2dad3 950 SMART SM00089 655 746 1.3 T 14-10-2018 IPR022409 PKD/Chitinase domain JV59_34360 214ae628edd1f5f3f2a9a00cb4f2dad3 950 SMART SM00089 750 839 9.7E-4 T 14-10-2018 IPR022409 PKD/Chitinase domain JV59_26845 0668d4b26ed3b7f163a7fbe9c486e896 155 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 150 2.2E-41 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 JV59_26845 0668d4b26ed3b7f163a7fbe9c486e896 155 SUPERFAMILY SSF48013 7 153 5.49E-38 T 14-10-2018 IPR035926 NusB-like superfamily JV59_26845 0668d4b26ed3b7f163a7fbe9c486e896 155 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 8 153 22.576 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 JV59_26845 0668d4b26ed3b7f163a7fbe9c486e896 155 Pfam PF01029 NusB family 11 149 1.4E-34 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 JV59_26845 0668d4b26ed3b7f163a7fbe9c486e896 155 Gene3D G3DSA:1.10.940.10 3 155 4.5E-47 T 14-10-2018 IPR035926 NusB-like superfamily JV59_28855 151d2dadd08dd5f2dde218ae2f9a400f 426 Gene3D G3DSA:3.50.50.60 1 267 1.8E-26 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_28855 151d2dadd08dd5f2dde218ae2f9a400f 426 SUPERFAMILY SSF51905 1 413 3.11E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_28855 151d2dadd08dd5f2dde218ae2f9a400f 426 Pfam PF01593 Flavin containing amine oxidoreductase 10 265 5.6E-21 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 JV59_38175 e1bdff04629ae656a6d4b2eb5416a7cc 155 Pfam PF00364 Biotin-requiring enzyme 80 154 3.3E-24 T 14-10-2018 IPR000089 Biotin/lipoyl attachment JV59_38175 e1bdff04629ae656a6d4b2eb5416a7cc 155 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 111 128 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JV59_38175 e1bdff04629ae656a6d4b2eb5416a7cc 155 SUPERFAMILY SSF51230 80 155 1.31E-25 T 14-10-2018 IPR011053 Single hybrid motif JV59_38175 e1bdff04629ae656a6d4b2eb5416a7cc 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 101 115 2.4E-18 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 JV59_38175 e1bdff04629ae656a6d4b2eb5416a7cc 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 116 129 2.4E-18 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 JV59_38175 e1bdff04629ae656a6d4b2eb5416a7cc 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 84 97 2.4E-18 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 JV59_38175 e1bdff04629ae656a6d4b2eb5416a7cc 155 Gene3D G3DSA:2.40.50.100 77 155 1.2E-31 T 14-10-2018 JV59_38175 e1bdff04629ae656a6d4b2eb5416a7cc 155 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 155 1.4E-62 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 JV59_35310 50d416d06908c29efed3805c2e0bfa9b 323 Pfam PF03916 Polysulphide reductase, NrfD 7 322 4.6E-79 T 14-10-2018 IPR005614 NrfD family JV59_35310 50d416d06908c29efed3805c2e0bfa9b 323 Gene3D G3DSA:1.20.1630.10 9 215 2.2E-11 T 14-10-2018 JV59_35310 50d416d06908c29efed3805c2e0bfa9b 323 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 7 323 3.4E-147 T 14-10-2018 IPR017566 NrfD JV59_20565 4a2f244d17d4c37175bee9af344b1ac3 557 Gene3D G3DSA:2.30.40.10 34 529 1.0E-105 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JV59_20565 4a2f244d17d4c37175bee9af344b1ac3 557 Pfam PF07969 Amidohydrolase family 68 553 6.5E-97 T 14-10-2018 IPR013108 Amidohydrolase 3 JV59_20565 4a2f244d17d4c37175bee9af344b1ac3 557 Gene3D G3DSA:3.20.20.140 80 512 1.0E-105 T 14-10-2018 JV59_20565 4a2f244d17d4c37175bee9af344b1ac3 557 Gene3D G3DSA:3.10.310.70 99 215 1.0E-105 T 14-10-2018 JV59_20565 4a2f244d17d4c37175bee9af344b1ac3 557 SUPERFAMILY SSF51556 79 513 2.08E-35 T 14-10-2018 IPR032466 Metal-dependent hydrolase JV59_20565 4a2f244d17d4c37175bee9af344b1ac3 557 SUPERFAMILY SSF51338 18 555 4.08E-20 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JV59_21135 5fdd58babad9ba80c4c0a3f0ee6008d9 431 Gene3D G3DSA:3.40.640.10 47 298 1.4E-184 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_21135 5fdd58babad9ba80c4c0a3f0ee6008d9 431 PIRSF PIRSF000412 3 431 1.6E-166 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 JV59_21135 5fdd58babad9ba80c4c0a3f0ee6008d9 431 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 232 248 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 JV59_21135 5fdd58babad9ba80c4c0a3f0ee6008d9 431 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 17 431 52.667 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 JV59_21135 5fdd58babad9ba80c4c0a3f0ee6008d9 431 Pfam PF00464 Serine hydroxymethyltransferase 19 395 1.8E-173 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 JV59_21135 5fdd58babad9ba80c4c0a3f0ee6008d9 431 Gene3D G3DSA:3.90.1150.10 21 404 1.4E-184 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_21135 5fdd58babad9ba80c4c0a3f0ee6008d9 431 SUPERFAMILY SSF53383 13 430 3.94E-179 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_18345 4c732dabe5759b737248d433ce0e6205 212 Pfam PF13460 NAD(P)H-binding 7 197 4.3E-31 T 14-10-2018 IPR016040 NAD(P)-binding domain JV59_18345 4c732dabe5759b737248d433ce0e6205 212 SUPERFAMILY SSF51735 1 210 5.04E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_18345 4c732dabe5759b737248d433ce0e6205 212 Gene3D G3DSA:3.40.50.720 1 211 1.1E-50 T 14-10-2018 JV59_18145 984b070c6121d0176bb42f0acbec3210 300 SUPERFAMILY SSF103481 202 281 4.32E-8 T 14-10-2018 JV59_18145 984b070c6121d0176bb42f0acbec3210 300 Pfam PF00892 EamA-like transporter family 142 281 1.5E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_18145 984b070c6121d0176bb42f0acbec3210 300 SUPERFAMILY SSF103481 32 132 3.4E-9 T 14-10-2018 JV59_17165 c49bed0484b6ac985b04eb932a426a16 263 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_17165 c49bed0484b6ac985b04eb932a426a16 263 Pfam PF00005 ABC transporter 18 164 8.2E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_17165 c49bed0484b6ac985b04eb932a426a16 263 SMART SM00382 26 209 2.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_17165 c49bed0484b6ac985b04eb932a426a16 263 Gene3D G3DSA:3.40.50.300 6 247 2.7E-63 T 14-10-2018 JV59_17165 c49bed0484b6ac985b04eb932a426a16 263 SUPERFAMILY SSF52540 12 221 8.48E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_22895 276c45ea281ea624d8acf69af29665d0 283 SMART SM00382 67 260 6.1E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_22895 276c45ea281ea624d8acf69af29665d0 283 Pfam PF00005 ABC transporter 59 213 3.4E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_22895 276c45ea281ea624d8acf69af29665d0 283 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 42 283 4.7E-112 T 14-10-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD JV59_22895 276c45ea281ea624d8acf69af29665d0 283 Gene3D G3DSA:3.40.50.300 42 281 9.5E-53 T 14-10-2018 JV59_22895 276c45ea281ea624d8acf69af29665d0 283 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 261 282 4.0E-7 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal JV59_22895 276c45ea281ea624d8acf69af29665d0 283 SUPERFAMILY SSF52540 42 281 6.86E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_28355 f503bf2b1da063f9fd8cfb67a4bfe916 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 JV59_28355 f503bf2b1da063f9fd8cfb67a4bfe916 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 JV59_28355 f503bf2b1da063f9fd8cfb67a4bfe916 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 377 5.1E-152 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 JV59_28355 f503bf2b1da063f9fd8cfb67a4bfe916 405 SUPERFAMILY SSF51161 293 404 9.29E-16 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JV59_28355 f503bf2b1da063f9fd8cfb67a4bfe916 405 SUPERFAMILY SSF53448 4 358 4.93E-70 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_28355 f503bf2b1da063f9fd8cfb67a4bfe916 405 Gene3D G3DSA:2.160.10.10 287 403 7.2E-32 T 14-10-2018 JV59_28355 f503bf2b1da063f9fd8cfb67a4bfe916 405 Pfam PF00483 Nucleotidyl transferase 6 273 3.7E-63 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 JV59_28355 f503bf2b1da063f9fd8cfb67a4bfe916 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 48.23 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 JV59_28355 f503bf2b1da063f9fd8cfb67a4bfe916 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 JV59_28355 f503bf2b1da063f9fd8cfb67a4bfe916 405 Gene3D G3DSA:3.90.550.10 2 286 7.2E-84 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_27690 03b14bb3d08e1ba5486536d37145eb5c 223 Pfam PF02107 Flagellar L-ring protein 46 221 2.0E-59 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 JV59_27690 03b14bb3d08e1ba5486536d37145eb5c 223 PRINTS PR01008 Flagellar L-ring protein signature 199 213 1.1E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 JV59_27690 03b14bb3d08e1ba5486536d37145eb5c 223 PRINTS PR01008 Flagellar L-ring protein signature 136 151 1.1E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 JV59_27690 03b14bb3d08e1ba5486536d37145eb5c 223 PRINTS PR01008 Flagellar L-ring protein signature 68 80 1.1E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 JV59_27690 03b14bb3d08e1ba5486536d37145eb5c 223 PRINTS PR01008 Flagellar L-ring protein signature 183 197 1.1E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 JV59_27690 03b14bb3d08e1ba5486536d37145eb5c 223 PRINTS PR01008 Flagellar L-ring protein signature 162 178 1.1E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 JV59_27690 03b14bb3d08e1ba5486536d37145eb5c 223 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 220 25.524 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 JV59_37765 5a12bf6e0574de4797f9e09c47233e57 287 Pfam PF00892 EamA-like transporter family 10 140 3.4E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_37765 5a12bf6e0574de4797f9e09c47233e57 287 Pfam PF00892 EamA-like transporter family 146 271 1.2E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_37765 5a12bf6e0574de4797f9e09c47233e57 287 SUPERFAMILY SSF103481 181 277 1.83E-13 T 14-10-2018 JV59_37765 5a12bf6e0574de4797f9e09c47233e57 287 SUPERFAMILY SSF103481 45 144 1.29E-12 T 14-10-2018 JV59_28175 b8e3352722ad5885999ef1703f1b4b9c 87 SUPERFAMILY SSF55229 34 85 1.31E-16 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 JV59_28175 b8e3352722ad5885999ef1703f1b4b9c 87 Gene3D G3DSA:3.30.1070.10 20 81 6.7E-25 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 JV59_28175 b8e3352722ad5885999ef1703f1b4b9c 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 87 18.582 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 JV59_28175 b8e3352722ad5885999ef1703f1b4b9c 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 2.9E-33 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 JV59_28175 b8e3352722ad5885999ef1703f1b4b9c 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 6.6E-23 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 JV59_30200 165ee3bfb97e60f0c83dcdfd1d8bbf5c 219 Pfam PF11140 Protein of unknown function (DUF2913) 3 214 6.7E-85 T 14-10-2018 IPR021316 Protein of unknown function DUF2913 JV59_29540 ac0f43e53af3223b3c29a632c9b29821 416 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 4 410 1.9E-101 T 14-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type JV59_29540 ac0f43e53af3223b3c29a632c9b29821 416 Pfam PF04403 Paraquat-inducible protein A 45 200 4.0E-37 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like JV59_29540 ac0f43e53af3223b3c29a632c9b29821 416 Pfam PF04403 Paraquat-inducible protein A 254 411 2.6E-52 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like JV59_24875 b072dede5baabc0ad599b5c8985b918b 248 Pfam PF12872 OST-HTH/LOTUS domain 169 215 5.3E-11 T 14-10-2018 IPR025605 OST-HTH/LOTUS domain JV59_24875 b072dede5baabc0ad599b5c8985b918b 248 Gene3D G3DSA:1.10.10.1880 165 234 2.1E-18 T 14-10-2018 JV59_24875 b072dede5baabc0ad599b5c8985b918b 248 Gene3D G3DSA:3.40.50.1010 2 142 1.3E-16 T 14-10-2018 JV59_24875 b072dede5baabc0ad599b5c8985b918b 248 Pfam PF01936 NYN domain 5 139 1.4E-30 T 14-10-2018 IPR021139 NYN domain, limkain-b1-type JV59_39360 577c8cf1867e621b0c4ab2b04947730c 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 254 1.9E-38 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_39360 577c8cf1867e621b0c4ab2b04947730c 258 SUPERFAMILY SSF53850 1 255 9.21E-50 T 14-10-2018 JV59_39360 577c8cf1867e621b0c4ab2b04947730c 258 Gene3D G3DSA:3.40.190.10 30 252 5.8E-63 T 14-10-2018 JV59_39360 577c8cf1867e621b0c4ab2b04947730c 258 Gene3D G3DSA:3.40.190.10 120 215 5.8E-63 T 14-10-2018 JV59_39360 577c8cf1867e621b0c4ab2b04947730c 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site JV59_39360 577c8cf1867e621b0c4ab2b04947730c 258 SMART SM00062 33 257 7.4E-39 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_26065 87aa8c1ff61d7f76ea8f48b80550b871 153 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 1.3E-51 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 JV59_26065 87aa8c1ff61d7f76ea8f48b80550b871 153 SUPERFAMILY SSF52540 27 152 2.12E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_26065 87aa8c1ff61d7f76ea8f48b80550b871 153 Gene3D G3DSA:3.40.50.300 2 153 5.1E-49 T 14-10-2018 JV59_26065 87aa8c1ff61d7f76ea8f48b80550b871 153 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 1.2E-42 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 JV59_35960 a6ab364d16e4559d73a1d124bdb4db83 269 Pfam PF00899 ThiF family 23 208 3.0E-38 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 JV59_35960 a6ab364d16e4559d73a1d124bdb4db83 269 Gene3D G3DSA:3.40.50.720 6 269 8.2E-110 T 14-10-2018 JV59_35960 a6ab364d16e4559d73a1d124bdb4db83 269 SUPERFAMILY SSF69572 10 267 8.89E-65 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 JV59_18050 1ab8383a9730090e9a36cd64b170821d 456 SUPERFAMILY SSF143548 16 154 5.23E-44 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 JV59_18050 1ab8383a9730090e9a36cd64b170821d 456 Pfam PF03315 Serine dehydratase beta chain 3 152 1.2E-52 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 JV59_18050 1ab8383a9730090e9a36cd64b170821d 456 Gene3D G3DSA:3.30.1330.90 10 157 1.9E-49 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 JV59_18050 1ab8383a9730090e9a36cd64b170821d 456 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 448 7.2E-200 T 14-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 JV59_18050 1ab8383a9730090e9a36cd64b170821d 456 Pfam PF03313 Serine dehydratase alpha chain 191 447 1.2E-94 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit JV59_23270 21ba8790e6a043843414f968e98d0355 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 55 3.0E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_23270 21ba8790e6a043843414f968e98d0355 199 Gene3D G3DSA:1.10.10.60 2 55 6.4E-17 T 14-10-2018 JV59_23270 21ba8790e6a043843414f968e98d0355 199 SUPERFAMILY SSF48498 78 175 3.25E-5 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JV59_23270 21ba8790e6a043843414f968e98d0355 199 SUPERFAMILY SSF46689 4 64 1.7E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_23270 21ba8790e6a043843414f968e98d0355 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 6.5E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_23270 21ba8790e6a043843414f968e98d0355 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 6.5E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_23270 21ba8790e6a043843414f968e98d0355 199 Gene3D G3DSA:1.10.357.10 62 196 1.8E-23 T 14-10-2018 JV59_19135 f5ddcf8e432ffe684f8e012abc1b34ad 575 SUPERFAMILY SSF53850 120 558 1.81E-49 T 14-10-2018 JV59_19135 f5ddcf8e432ffe684f8e012abc1b34ad 575 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 166 306 3.1E-19 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain JV59_19135 f5ddcf8e432ffe684f8e012abc1b34ad 575 Gene3D G3DSA:3.40.190.10 122 312 4.5E-34 T 14-10-2018 JV59_19135 f5ddcf8e432ffe684f8e012abc1b34ad 575 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 117 3.6E-39 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain JV59_20345 e81c6f6d65474c4d5fd9025a50a57588 194 Pfam PF01810 LysE type translocator 17 188 1.0E-12 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_22510 fa66c67f0038db3bc9d8b26bb4c8d4a8 324 Gene3D G3DSA:3.40.50.1820 49 306 6.7E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_22510 fa66c67f0038db3bc9d8b26bb4c8d4a8 324 SUPERFAMILY SSF53474 36 322 8.28E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_22510 fa66c67f0038db3bc9d8b26bb4c8d4a8 324 Gene3D G3DSA:1.10.10.800 173 252 6.7E-59 T 14-10-2018 JV59_22510 fa66c67f0038db3bc9d8b26bb4c8d4a8 324 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 32 174 9.5E-12 T 14-10-2018 IPR010520 UPF0255 family JV59_20880 8eed424772e8e095803652fc611024e5 74 Pfam PF00462 Glutaredoxin 3 61 4.8E-13 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 JV59_20880 8eed424772e8e095803652fc611024e5 74 SUPERFAMILY SSF52833 1 72 1.84E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_20880 8eed424772e8e095803652fc611024e5 74 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 72 3.2E-28 T 14-10-2018 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 JV59_20880 8eed424772e8e095803652fc611024e5 74 Gene3D G3DSA:3.40.30.10 1 74 3.4E-24 T 14-10-2018 JV59_02480 7e2522ab6dd1a3abebcece109e96d54f 402 Gene3D G3DSA:1.10.1740.10 312 401 2.0E-28 T 14-10-2018 JV59_02480 7e2522ab6dd1a3abebcece109e96d54f 402 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 1.4E-46 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JV59_02480 7e2522ab6dd1a3abebcece109e96d54f 402 Gene3D G3DSA:3.40.50.720 1 150 4.0E-53 T 14-10-2018 JV59_02480 7e2522ab6dd1a3abebcece109e96d54f 402 SUPERFAMILY SSF55347 126 274 1.14E-61 T 14-10-2018 JV59_02480 7e2522ab6dd1a3abebcece109e96d54f 402 SUPERFAMILY SSF69055 302 399 7.59E-30 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JV59_02480 7e2522ab6dd1a3abebcece109e96d54f 402 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 45.766 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JV59_02480 7e2522ab6dd1a3abebcece109e96d54f 402 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 2.5E-36 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JV59_02480 7e2522ab6dd1a3abebcece109e96d54f 402 PIRSF PIRSF006205 1 402 1.8E-152 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JV59_02480 7e2522ab6dd1a3abebcece109e96d54f 402 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 395 3.9E-162 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JV59_02480 7e2522ab6dd1a3abebcece109e96d54f 402 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 391 1.1E-39 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JV59_02480 7e2522ab6dd1a3abebcece109e96d54f 402 SUPERFAMILY SSF51735 2 150 1.68E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_37285 0048d013fd50e7b980441e4598a04d6f 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 354 8.6E-70 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 JV59_37285 0048d013fd50e7b980441e4598a04d6f 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 2.4E-132 T 14-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 JV59_36215 d420166a22b3ef508c3bcaa44f7fa141 110 Pfam PF01588 Putative tRNA binding domain 14 108 3.0E-30 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 JV59_36215 d420166a22b3ef508c3bcaa44f7fa141 110 Gene3D G3DSA:2.40.50.140 1 110 9.3E-39 T 14-10-2018 JV59_36215 d420166a22b3ef508c3bcaa44f7fa141 110 SUPERFAMILY SSF50249 8 109 1.3E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_19050 c0987d0ecfe081b59877830b0d90f8c3 511 SUPERFAMILY SSF51735 137 315 5.45E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_19050 c0987d0ecfe081b59877830b0d90f8c3 511 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 9.6E-75 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain JV59_19050 c0987d0ecfe081b59877830b0d90f8c3 511 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 14-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 JV59_19050 c0987d0ecfe081b59877830b0d90f8c3 511 SMART SM01002 146 311 5.6E-82 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain JV59_19050 c0987d0ecfe081b59877830b0d90f8c3 511 Gene3D G3DSA:3.40.50.720 137 318 1.2E-160 T 14-10-2018 JV59_19050 c0987d0ecfe081b59877830b0d90f8c3 511 SMART SM01003 4 137 1.8E-71 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal JV59_19050 c0987d0ecfe081b59877830b0d90f8c3 511 Gene3D G3DSA:3.40.50.720 3 365 1.2E-160 T 14-10-2018 JV59_19050 c0987d0ecfe081b59877830b0d90f8c3 511 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 5.1E-49 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal JV59_19050 c0987d0ecfe081b59877830b0d90f8c3 511 SUPERFAMILY SSF52283 1 168 1.36E-54 T 14-10-2018 JV59_19050 c0987d0ecfe081b59877830b0d90f8c3 511 PIRSF PIRSF000203 1 510 1.1E-274 T 14-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 JV59_19050 c0987d0ecfe081b59877830b0d90f8c3 511 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 510 2.1E-279 T 14-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 JV59_19050 c0987d0ecfe081b59877830b0d90f8c3 511 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 427 510 9.4E-37 T 14-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 JV59_02310 e3f9d0f0ea169f4a6dedebc9416abb91 405 SUPERFAMILY SSF52172 3 118 1.99E-17 T 14-10-2018 IPR011006 CheY-like superfamily JV59_02310 e3f9d0f0ea169f4a6dedebc9416abb91 405 Gene3D G3DSA:3.40.50.2300 1 120 9.4E-16 T 14-10-2018 JV59_02310 e3f9d0f0ea169f4a6dedebc9416abb91 405 SMART SM00267 244 404 5.0E-47 T 14-10-2018 IPR000160 GGDEF domain JV59_02310 e3f9d0f0ea169f4a6dedebc9416abb91 405 Pfam PF00072 Response regulator receiver domain 127 237 7.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_02310 e3f9d0f0ea169f4a6dedebc9416abb91 405 Pfam PF00072 Response regulator receiver domain 5 104 2.2E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_02310 e3f9d0f0ea169f4a6dedebc9416abb91 405 SUPERFAMILY SSF55073 260 402 8.63E-35 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_02310 e3f9d0f0ea169f4a6dedebc9416abb91 405 Gene3D G3DSA:3.30.70.270 249 404 4.9E-41 T 14-10-2018 JV59_02310 e3f9d0f0ea169f4a6dedebc9416abb91 405 Gene3D G3DSA:3.40.50.2300 121 248 3.8E-28 T 14-10-2018 JV59_02310 e3f9d0f0ea169f4a6dedebc9416abb91 405 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 253 403 2.4E-37 T 14-10-2018 IPR000160 GGDEF domain JV59_02310 e3f9d0f0ea169f4a6dedebc9416abb91 405 Pfam PF00990 Diguanylate cyclase, GGDEF domain 255 400 1.6E-32 T 14-10-2018 IPR000160 GGDEF domain JV59_02310 e3f9d0f0ea169f4a6dedebc9416abb91 405 SMART SM00448 124 238 6.8E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_02310 e3f9d0f0ea169f4a6dedebc9416abb91 405 SMART SM00448 3 115 3.3E-7 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_02310 e3f9d0f0ea169f4a6dedebc9416abb91 405 SUPERFAMILY SSF52172 124 261 6.26E-30 T 14-10-2018 IPR011006 CheY-like superfamily JV59_21590 98abd631f93c114abe71738ca4498e65 301 Pfam PF00892 EamA-like transporter family 20 147 1.2E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_21590 98abd631f93c114abe71738ca4498e65 301 Pfam PF00892 EamA-like transporter family 158 298 1.2E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_21590 98abd631f93c114abe71738ca4498e65 301 SUPERFAMILY SSF103481 51 148 1.96E-10 T 14-10-2018 JV59_21590 98abd631f93c114abe71738ca4498e65 301 SUPERFAMILY SSF103481 205 298 2.09E-16 T 14-10-2018 JV59_25445 218cf41fd4dc15c84259328426bcbecd 208 PIRSF PIRSF006324 1 208 2.6E-58 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_25445 218cf41fd4dc15c84259328426bcbecd 208 Pfam PF01810 LysE type translocator 15 201 1.9E-32 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_35550 92409bebf6881d6bdc5255b3d4e3a44d 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 1.8E-18 T 14-10-2018 IPR021249 Protein of unknown function DUF2788 JV59_17825 ce07dde17062230ec05a46d9cc7949e2 292 Gene3D G3DSA:1.10.10.10 1 91 5.6E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_17825 ce07dde17062230ec05a46d9cc7949e2 292 Pfam PF03466 LysR substrate binding domain 111 287 1.1E-13 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_17825 ce07dde17062230ec05a46d9cc7949e2 292 SUPERFAMILY SSF46785 1 87 8.28E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_17825 ce07dde17062230ec05a46d9cc7949e2 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.6E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_17825 ce07dde17062230ec05a46d9cc7949e2 292 SUPERFAMILY SSF53850 92 289 6.7E-21 T 14-10-2018 JV59_17825 ce07dde17062230ec05a46d9cc7949e2 292 Gene3D G3DSA:3.40.190.290 93 283 2.4E-35 T 14-10-2018 JV59_39255 787798dd770910e5e042774ea0c19f7b 245 SMART SM00382 26 216 5.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_39255 787798dd770910e5e042774ea0c19f7b 245 Gene3D G3DSA:3.40.50.300 1 244 1.6E-76 T 14-10-2018 JV59_39255 787798dd770910e5e042774ea0c19f7b 245 SUPERFAMILY SSF52540 1 238 6.25E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_39255 787798dd770910e5e042774ea0c19f7b 245 Pfam PF00005 ABC transporter 17 168 5.7E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_39255 787798dd770910e5e042774ea0c19f7b 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_39255 787798dd770910e5e042774ea0c19f7b 245 PIRSF PIRSF039085 1 244 1.5E-105 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 JV59_31985 3c33c9ed14d2dbfb8021d4651b83a027 1032 SUPERFAMILY SSF109604 889 994 2.61E-7 T 14-10-2018 JV59_31985 3c33c9ed14d2dbfb8021d4651b83a027 1032 Pfam PF13487 HD domain 887 952 1.6E-19 T 14-10-2018 JV59_31985 3c33c9ed14d2dbfb8021d4651b83a027 1032 Gene3D G3DSA:1.10.3210.10 878 1009 4.6E-23 T 14-10-2018 JV59_31985 3c33c9ed14d2dbfb8021d4651b83a027 1032 Gene3D G3DSA:1.10.3210.10 638 751 1.4E-18 T 14-10-2018 JV59_31985 3c33c9ed14d2dbfb8021d4651b83a027 1032 SUPERFAMILY SSF109604 654 741 1.13E-8 T 14-10-2018 JV59_31985 3c33c9ed14d2dbfb8021d4651b83a027 1032 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 299 497 9.3E-17 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_31985 3c33c9ed14d2dbfb8021d4651b83a027 1032 Gene3D G3DSA:3.40.190.10 376 458 1.9E-21 T 14-10-2018 JV59_31985 3c33c9ed14d2dbfb8021d4651b83a027 1032 SUPERFAMILY SSF53850 288 499 3.09E-19 T 14-10-2018 JV59_31985 3c33c9ed14d2dbfb8021d4651b83a027 1032 SMART SM00471 659 970 9.6E-4 T 14-10-2018 IPR003607 HD/PDEase domain JV59_31985 3c33c9ed14d2dbfb8021d4651b83a027 1032 Gene3D G3DSA:3.40.190.10 282 495 1.9E-21 T 14-10-2018 JV59_32700 8a6f9d8ecb06a315f4921df4a4c7a550 342 Pfam PF02016 LD-carboxypeptidase 13 328 1.7E-64 T 14-10-2018 IPR003507 Peptidase family S66 JV59_32700 8a6f9d8ecb06a315f4921df4a4c7a550 342 PIRSF PIRSF028757 1 341 1.3E-62 T 14-10-2018 IPR003507 Peptidase family S66 JV59_32700 8a6f9d8ecb06a315f4921df4a4c7a550 342 Gene3D G3DSA:3.50.30.60 172 340 1.9E-34 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily JV59_32700 8a6f9d8ecb06a315f4921df4a4c7a550 342 Gene3D G3DSA:3.40.50.10740 1 159 3.3E-39 T 14-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal JV59_32700 8a6f9d8ecb06a315f4921df4a4c7a550 342 SUPERFAMILY SSF52317 1 162 2.24E-35 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_32700 8a6f9d8ecb06a315f4921df4a4c7a550 342 SUPERFAMILY SSF141986 203 332 1.83E-27 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily JV59_30950 21322814c19f94bf48a3ed4ad8b7b7a7 291 Gene3D G3DSA:1.10.10.10 3 90 2.1E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_30950 21322814c19f94bf48a3ed4ad8b7b7a7 291 Pfam PF03466 LysR substrate binding domain 87 287 2.7E-40 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_30950 21322814c19f94bf48a3ed4ad8b7b7a7 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.1E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_30950 21322814c19f94bf48a3ed4ad8b7b7a7 291 SUPERFAMILY SSF46785 4 110 1.29E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_30950 21322814c19f94bf48a3ed4ad8b7b7a7 291 SUPERFAMILY SSF53850 87 289 6.83E-42 T 14-10-2018 JV59_30950 21322814c19f94bf48a3ed4ad8b7b7a7 291 Gene3D G3DSA:3.40.190.290 91 288 4.6E-59 T 14-10-2018 JV59_30265 15d0d3aa48dc492b4ec5ede57cc0e210 170 SUPERFAMILY SSF55021 88 166 1.21E-11 T 14-10-2018 JV59_30265 15d0d3aa48dc492b4ec5ede57cc0e210 170 Pfam PF13740 ACT domain 4 67 6.3E-11 T 14-10-2018 JV59_30265 15d0d3aa48dc492b4ec5ede57cc0e210 170 PIRSF PIRSF028103 1 170 1.3E-46 T 14-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 JV59_30265 15d0d3aa48dc492b4ec5ede57cc0e210 170 Gene3D G3DSA:3.30.70.260 86 170 1.7E-14 T 14-10-2018 JV59_26135 61c35e9b9f26944aaa78d9f580a5f15f 126 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 6.2E-39 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26135 61c35e9b9f26944aaa78d9f580a5f15f 126 Pfam PF01250 Ribosomal protein S6 3 91 1.1E-28 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26135 61c35e9b9f26944aaa78d9f580a5f15f 126 SUPERFAMILY SSF54995 1 103 1.57E-38 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26135 61c35e9b9f26944aaa78d9f580a5f15f 126 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.132 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 JV59_26135 61c35e9b9f26944aaa78d9f580a5f15f 126 Gene3D G3DSA:3.30.70.60 1 92 6.5E-33 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 JV59_26135 61c35e9b9f26944aaa78d9f580a5f15f 126 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 14-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 JV59_21765 5f0f90b3e091117a21d4b745a809d34e 293 Gene3D G3DSA:3.10.520.20 4 288 3.1E-54 T 14-10-2018 JV59_21765 5f0f90b3e091117a21d4b745a809d34e 293 Pfam PF02424 ApbE family 14 264 2.4E-43 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 JV59_21765 5f0f90b3e091117a21d4b745a809d34e 293 SUPERFAMILY SSF143631 7 266 3.92E-54 T 14-10-2018 IPR003374 ApbE-like superfamily JV59_39570 48afbe9c758647fb2c251681fa7f9d54 158 Pfam PF04945 YHS domain 47 91 4.7E-8 T 14-10-2018 IPR007029 YHS domain JV59_20370 0bd4b8238cc28446059ae6fd56e83c55 716 Gene3D G3DSA:3.60.21.10 33 168 2.1E-8 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JV59_20370 0bd4b8238cc28446059ae6fd56e83c55 716 Gene3D G3DSA:3.60.21.10 210 486 1.4E-32 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JV59_20370 0bd4b8238cc28446059ae6fd56e83c55 716 SUPERFAMILY SSF56300 80 460 3.13E-18 T 14-10-2018 JV59_20370 0bd4b8238cc28446059ae6fd56e83c55 716 Pfam PF00149 Calcineurin-like phosphoesterase 38 412 1.6E-5 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 JV59_30600 1b28fbc6dbb3821a9ba44b976c505043 658 SUPERFAMILY SSF81345 348 657 1.57E-65 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JV59_30600 1b28fbc6dbb3821a9ba44b976c505043 658 SUPERFAMILY SSF81345 23 323 3.01E-57 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JV59_30600 1b28fbc6dbb3821a9ba44b976c505043 658 Gene3D G3DSA:1.10.3470.10 335 658 1.7E-73 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JV59_30600 1b28fbc6dbb3821a9ba44b976c505043 658 Pfam PF01032 FecCD transport family 10 321 8.1E-67 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 JV59_30600 1b28fbc6dbb3821a9ba44b976c505043 658 Pfam PF01032 FecCD transport family 354 657 1.8E-71 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 JV59_30600 1b28fbc6dbb3821a9ba44b976c505043 658 Gene3D G3DSA:1.10.3470.10 1 328 1.2E-69 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JV59_32990 9e4c82451a351911dd25928b98adf35f 157 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 1.2E-72 T 14-10-2018 IPR021334 Protein of unknown function DUF2947 JV59_17060 9f4b54cf09fae368a278f1686a144571 148 Pfam PF11012 Protein of unknown function (DUF2850) 38 117 7.0E-29 T 14-10-2018 IPR021271 Protein of unknown function DUF2850 JV59_39950 212cd8d8212026f337d964c03b946e11 392 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 386 3.5E-106 T 14-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 JV59_39950 212cd8d8212026f337d964c03b946e11 392 SUPERFAMILY SSF48452 85 215 1.52E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_39950 212cd8d8212026f337d964c03b946e11 392 SUPERFAMILY SSF48452 268 389 8.95E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_39950 212cd8d8212026f337d964c03b946e11 392 Pfam PF07219 HemY protein N-terminus 26 130 2.0E-25 T 14-10-2018 IPR010817 HemY, N-terminal JV59_39950 212cd8d8212026f337d964c03b946e11 392 Gene3D G3DSA:1.25.40.10 152 391 7.6E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_18160 021c41b157556fa8891eecfd872c5237 158 Gene3D G3DSA:1.10.10.10 2 136 7.9E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_18160 021c41b157556fa8891eecfd872c5237 158 SUPERFAMILY SSF46785 5 141 1.66E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_18160 021c41b157556fa8891eecfd872c5237 158 SMART SM00347 24 124 1.6E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_18160 021c41b157556fa8891eecfd872c5237 158 Pfam PF01047 MarR family 31 89 5.0E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JV59_28990 d41482cc20c787131a524f711850f930 332 SUPERFAMILY SSF52540 4 268 2.77E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_28990 d41482cc20c787131a524f711850f930 332 Gene3D G3DSA:3.40.50.300 2 332 1.1E-72 T 14-10-2018 JV59_28990 d41482cc20c787131a524f711850f930 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 5.5E-21 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JV59_28990 d41482cc20c787131a524f711850f930 332 Pfam PF00005 ABC transporter 24 187 6.4E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_28990 d41482cc20c787131a524f711850f930 332 SMART SM00382 32 237 0.003 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_28990 d41482cc20c787131a524f711850f930 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 1.9E-15 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JV59_19510 5f4b9333d91945faa90f521d0b5e3bec 136 SUPERFAMILY SSF55811 5 127 7.58E-22 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JV59_19510 5f4b9333d91945faa90f521d0b5e3bec 136 Pfam PF00293 NUDIX domain 1 121 2.4E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JV59_19510 5f4b9333d91945faa90f521d0b5e3bec 136 Gene3D G3DSA:3.90.79.10 1 134 5.5E-22 T 14-10-2018 JV59_19510 5f4b9333d91945faa90f521d0b5e3bec 136 ProSitePatterns PS00893 Nudix box signature. 34 55 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JV59_35730 bee390a6082495b5e3886900d79df738 423 SUPERFAMILY SSF118215 5 406 3.4E-104 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 JV59_35730 bee390a6082495b5e3886900d79df738 423 Pfam PF00375 Sodium:dicarboxylate symporter family 6 404 6.9E-115 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 JV59_35730 bee390a6082495b5e3886900d79df738 423 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 8.9E-37 T 14-10-2018 JV59_35730 bee390a6082495b5e3886900d79df738 423 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 8.9E-37 T 14-10-2018 JV59_35730 bee390a6082495b5e3886900d79df738 423 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 8.9E-37 T 14-10-2018 JV59_35730 bee390a6082495b5e3886900d79df738 423 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 8.9E-37 T 14-10-2018 JV59_35730 bee390a6082495b5e3886900d79df738 423 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 8.9E-37 T 14-10-2018 JV59_35730 bee390a6082495b5e3886900d79df738 423 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 8.9E-37 T 14-10-2018 JV59_35730 bee390a6082495b5e3886900d79df738 423 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 8.9E-37 T 14-10-2018 JV59_35730 bee390a6082495b5e3886900d79df738 423 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 8.9E-37 T 14-10-2018 JV59_35730 bee390a6082495b5e3886900d79df738 423 Gene3D G3DSA:1.10.3860.10 1 422 2.2E-113 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 JV59_18370 691a45008487774cacfe18b69b6b8590 231 Gene3D G3DSA:2.60.120.10 8 231 1.0E-84 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_18370 691a45008487774cacfe18b69b6b8590 231 Pfam PF02678 Pirin 11 119 5.8E-34 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 JV59_18370 691a45008487774cacfe18b69b6b8590 231 SUPERFAMILY SSF51182 1 230 3.66E-71 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JV59_18370 691a45008487774cacfe18b69b6b8590 231 Gene3D G3DSA:2.60.120.10 11 135 1.0E-84 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_18370 691a45008487774cacfe18b69b6b8590 231 PIRSF PIRSF006232 1 229 3.4E-54 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 JV59_35840 9b4aa81e602e825cea76db7e8e72940f 254 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 8.8E-40 T 14-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 JV59_35840 9b4aa81e602e825cea76db7e8e72940f 254 SMART SM00563 67 182 5.5E-37 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JV59_35840 9b4aa81e602e825cea76db7e8e72940f 254 Pfam PF01553 Acyltransferase 57 180 7.2E-30 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JV59_35840 9b4aa81e602e825cea76db7e8e72940f 254 SUPERFAMILY SSF69593 5 239 3.14E-58 T 14-10-2018 JV59_39155 38015a31b67dbdd9b59f778de93ec792 94 SUPERFAMILY SSF55021 3 75 1.33E-9 T 14-10-2018 JV59_39155 38015a31b67dbdd9b59f778de93ec792 94 Gene3D G3DSA:3.30.70.260 1 89 4.0E-10 T 14-10-2018 JV59_39155 38015a31b67dbdd9b59f778de93ec792 94 Pfam PF13710 ACT domain 12 73 5.5E-20 T 14-10-2018 JV59_33055 7078555a142db83b9c22be85fc84fb71 453 SUPERFAMILY SSF143548 16 157 3.14E-44 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 JV59_33055 7078555a142db83b9c22be85fc84fb71 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 4.1E-226 T 14-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 JV59_33055 7078555a142db83b9c22be85fc84fb71 453 Pfam PF03315 Serine dehydratase beta chain 3 155 4.1E-54 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 JV59_33055 7078555a142db83b9c22be85fc84fb71 453 Pfam PF03313 Serine dehydratase alpha chain 184 448 7.5E-96 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit JV59_33055 7078555a142db83b9c22be85fc84fb71 453 Gene3D G3DSA:3.30.1330.90 10 159 1.7E-49 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 JV59_01810 89a2a1692aba7ccc0a27a7c29576a0c2 167 Gene3D G3DSA:3.40.630.30 1 167 1.3E-46 T 14-10-2018 JV59_01810 89a2a1692aba7ccc0a27a7c29576a0c2 167 SUPERFAMILY SSF55729 1 131 2.57E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_01810 89a2a1692aba7ccc0a27a7c29576a0c2 167 Pfam PF13527 Acetyltransferase (GNAT) domain 3 123 5.4E-14 T 14-10-2018 JV59_14210 56b6ac0ecb206449123f870064c4299c 354 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 6 349 1.9E-151 T 14-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 JV59_14210 56b6ac0ecb206449123f870064c4299c 354 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 7 352 26.869 T 14-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 JV59_14210 56b6ac0ecb206449123f870064c4299c 354 Pfam PF00953 Glycosyl transferase family 4 73 232 1.8E-29 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 JV59_37075 5329904e620f0a911fb8aab3c8acd178 348 SUPERFAMILY SSF53756 1 293 4.54E-13 T 14-10-2018 JV59_37075 5329904e620f0a911fb8aab3c8acd178 348 Gene3D G3DSA:3.40.50.2000 175 334 1.9E-5 T 14-10-2018 JV59_37075 5329904e620f0a911fb8aab3c8acd178 348 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 311 1.0E-101 T 14-10-2018 IPR005262 Conserved hypothetical protein CHP00661 JV59_37075 5329904e620f0a911fb8aab3c8acd178 348 Pfam PF13528 Glycosyl transferase family 1 1 300 1.5E-39 T 14-10-2018 JV59_36560 670635acef5fa693a829011101c044f3 651 Gene3D G3DSA:1.10.1240.20 414 479 2.1E-20 T 14-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 JV59_36560 670635acef5fa693a829011101c044f3 651 SUPERFAMILY SSF53955 487 644 4.93E-48 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily JV59_36560 670635acef5fa693a829011101c044f3 651 Pfam PF01464 Transglycosylase SLT domain 492 604 2.2E-28 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 JV59_36560 670635acef5fa693a829011101c044f3 651 SUPERFAMILY SSF48435 36 484 5.49E-127 T 14-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 JV59_36560 670635acef5fa693a829011101c044f3 651 Gene3D G3DSA:1.25.20.10 35 396 1.1E-103 T 14-10-2018 JV59_36560 670635acef5fa693a829011101c044f3 651 Pfam PF14718 Soluble lytic murein transglycosylase L domain 415 479 3.1E-22 T 14-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 JV59_36560 670635acef5fa693a829011101c044f3 651 Gene3D G3DSA:1.10.530.10 480 651 4.3E-49 T 14-10-2018 JV59_26245 bf2d59ccdcf3e84a8abb55b2bdb9218b 330 Pfam PF13343 Bacterial extracellular solute-binding protein 76 294 1.1E-19 T 14-10-2018 JV59_26245 bf2d59ccdcf3e84a8abb55b2bdb9218b 330 Gene3D G3DSA:3.40.190.10 26 300 2.7E-118 T 14-10-2018 JV59_26245 bf2d59ccdcf3e84a8abb55b2bdb9218b 330 SUPERFAMILY SSF53850 24 325 6.32E-66 T 14-10-2018 JV59_26245 bf2d59ccdcf3e84a8abb55b2bdb9218b 330 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 21 324 2.8E-144 T 14-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 JV59_26245 bf2d59ccdcf3e84a8abb55b2bdb9218b 330 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 13 329 8.0E-150 T 14-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 JV59_26245 bf2d59ccdcf3e84a8abb55b2bdb9218b 330 Gene3D G3DSA:3.40.190.10 126 325 2.7E-118 T 14-10-2018 JV59_36745 97cb35b5a5b19f28d714151a1c9b6a8e 445 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 410 1.8E-46 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_36745 97cb35b5a5b19f28d714151a1c9b6a8e 445 Pfam PF01554 MatE 15 176 1.7E-21 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_36745 97cb35b5a5b19f28d714151a1c9b6a8e 445 Pfam PF01554 MatE 239 398 1.6E-10 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_36745 97cb35b5a5b19f28d714151a1c9b6a8e 445 PIRSF PIRSF006603 1 442 1.1E-66 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_29795 423607455847666973a0e6c503034ef7 298 Pfam PF03466 LysR substrate binding domain 88 288 1.1E-36 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_29795 423607455847666973a0e6c503034ef7 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 6.8E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_29795 423607455847666973a0e6c503034ef7 298 SUPERFAMILY SSF46785 3 111 6.8E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_29795 423607455847666973a0e6c503034ef7 298 SUPERFAMILY SSF53850 89 290 2.17E-34 T 14-10-2018 JV59_29795 423607455847666973a0e6c503034ef7 298 Gene3D G3DSA:3.40.190.290 91 295 4.0E-35 T 14-10-2018 JV59_29795 423607455847666973a0e6c503034ef7 298 Gene3D G3DSA:1.10.10.10 2 82 1.4E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_20840 127df9ee54ae5751a0af1b4adef33bf6 462 PIRSF PIRSF006446 1 458 2.9E-204 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 JV59_20840 127df9ee54ae5751a0af1b4adef33bf6 462 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 8 435 1.2E-166 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 JV59_20765 f76be9539040b4540b7911da29c96854 269 Pfam PF11060 Protein of unknown function (DUF2861) 22 266 8.6E-64 T 14-10-2018 IPR021290 Protein of unknown function DUF2861 JV59_31215 8fc3ec08fb78ffc0d063fa1af623c488 157 Gene3D G3DSA:1.25.40.10 6 155 7.1E-39 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_31215 8fc3ec08fb78ffc0d063fa1af623c488 157 SUPERFAMILY SSF48452 19 133 1.48E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_31215 8fc3ec08fb78ffc0d063fa1af623c488 157 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 13 149 2.0E-35 T 14-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD JV59_31215 8fc3ec08fb78ffc0d063fa1af623c488 157 PIRSF PIRSF003165 1 157 1.5E-47 T 14-10-2018 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup JV59_31215 8fc3ec08fb78ffc0d063fa1af623c488 157 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 97 119 1.1E-13 T 14-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD JV59_31215 8fc3ec08fb78ffc0d063fa1af623c488 157 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 65 87 1.1E-13 T 14-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD JV59_31215 8fc3ec08fb78ffc0d063fa1af623c488 157 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 41 60 1.1E-13 T 14-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD JV59_31215 8fc3ec08fb78ffc0d063fa1af623c488 157 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 16 39 1.1E-13 T 14-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD JV59_17055 19243cae047e733b1a229114d13e983c 364 Pfam PF00924 Mechanosensitive ion channel 138 342 7.7E-59 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 JV59_17055 19243cae047e733b1a229114d13e983c 364 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 212 246 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 JV59_17055 19243cae047e733b1a229114d13e983c 364 Gene3D G3DSA:3.30.70.100 249 346 1.7E-17 T 14-10-2018 JV59_17055 19243cae047e733b1a229114d13e983c 364 SUPERFAMILY SSF50182 180 247 3.92E-18 T 14-10-2018 IPR010920 LSM domain superfamily JV59_17055 19243cae047e733b1a229114d13e983c 364 SUPERFAMILY SSF82689 252 352 4.71E-20 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 JV59_17055 19243cae047e733b1a229114d13e983c 364 SUPERFAMILY SSF82861 97 179 5.75E-14 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 JV59_17055 19243cae047e733b1a229114d13e983c 364 Gene3D G3DSA:2.30.30.60 196 246 3.6E-10 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily JV59_18225 15a99da620e907cc37548fcd3a99e0d4 1030 Pfam PF13087 AAA domain 748 954 6.5E-44 T 14-10-2018 JV59_18225 15a99da620e907cc37548fcd3a99e0d4 1030 Gene3D G3DSA:3.40.50.300 771 991 6.8E-44 T 14-10-2018 JV59_18225 15a99da620e907cc37548fcd3a99e0d4 1030 Pfam PF13086 AAA domain 352 513 5.7E-22 T 14-10-2018 JV59_18225 15a99da620e907cc37548fcd3a99e0d4 1030 Pfam PF13086 AAA domain 554 728 1.0E-19 T 14-10-2018 JV59_18225 15a99da620e907cc37548fcd3a99e0d4 1030 Gene3D G3DSA:3.40.50.300 538 770 2.1E-26 T 14-10-2018 JV59_18225 15a99da620e907cc37548fcd3a99e0d4 1030 SUPERFAMILY SSF52540 342 963 1.19E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_01540 1e32d0f136991c8e1802ee1f6625c0da 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 3.9E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JV59_01540 1e32d0f136991c8e1802ee1f6625c0da 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 3.9E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JV59_01540 1e32d0f136991c8e1802ee1f6625c0da 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 3.9E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JV59_01540 1e32d0f136991c8e1802ee1f6625c0da 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 184 192 3.9E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JV59_01540 1e32d0f136991c8e1802ee1f6625c0da 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 168 178 3.9E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JV59_01540 1e32d0f136991c8e1802ee1f6625c0da 296 SUPERFAMILY SSF52374 3 282 4.15E-85 T 14-10-2018 JV59_01540 1e32d0f136991c8e1802ee1f6625c0da 296 Gene3D G3DSA:3.40.50.620 78 216 6.7E-109 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_01540 1e32d0f136991c8e1802ee1f6625c0da 296 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 3 268 3.5E-114 T 14-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 JV59_01540 1e32d0f136991c8e1802ee1f6625c0da 296 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 3 288 40.679 T 14-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 JV59_01540 1e32d0f136991c8e1802ee1f6625c0da 296 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 270 1.6E-44 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 JV59_01540 1e32d0f136991c8e1802ee1f6625c0da 296 Gene3D G3DSA:3.40.50.620 3 282 6.7E-109 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_26855 8bc00018215653b3f45a329a1d7c2d81 168 SUPERFAMILY SSF101307 9 160 4.84E-50 T 14-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 JV59_26855 8bc00018215653b3f45a329a1d7c2d81 168 PIRSF PIRSF006162 6 167 3.0E-54 T 14-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 JV59_26855 8bc00018215653b3f45a329a1d7c2d81 168 Pfam PF04608 Phosphatidylglycerophosphatase A 15 159 5.8E-54 T 14-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 JV59_20300 ce9d87da4d8593fc22e0642cee86ef6d 276 PIRSF PIRSF028200 1 276 2.4E-72 T 14-10-2018 IPR016875 Uncharacterised conserved protein UCP028200 JV59_35415 9864a924656337e45048cd19c67013bc 207 Gene3D G3DSA:3.40.50.1820 12 188 6.1E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_35415 9864a924656337e45048cd19c67013bc 207 SUPERFAMILY SSF53474 9 178 2.96E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_35415 9864a924656337e45048cd19c67013bc 207 Pfam PF00561 alpha/beta hydrolase fold 13 120 1.4E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_26950 e108d7a73521e0410563196f3112901b 247 Gene3D G3DSA:3.40.50.150 53 198 1.2E-15 T 14-10-2018 JV59_26950 e108d7a73521e0410563196f3112901b 247 SUPERFAMILY SSF53335 73 212 4.22E-22 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_26950 e108d7a73521e0410563196f3112901b 247 Pfam PF08241 Methyltransferase domain 74 125 1.5E-10 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 JV59_23750 527046e2b4b486dde4e6ffdf5a66f6fa 403 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 359 374 6.4E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_23750 527046e2b4b486dde4e6ffdf5a66f6fa 403 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 374 390 6.4E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_23750 527046e2b4b486dde4e6ffdf5a66f6fa 403 Gene3D G3DSA:3.40.50.300 39 193 3.3E-23 T 14-10-2018 JV59_23750 527046e2b4b486dde4e6ffdf5a66f6fa 403 Gene3D G3DSA:1.10.10.60 292 338 9.4E-11 T 14-10-2018 JV59_23750 527046e2b4b486dde4e6ffdf5a66f6fa 403 Gene3D G3DSA:1.10.8.60 194 264 1.1E-13 T 14-10-2018 JV59_23750 527046e2b4b486dde4e6ffdf5a66f6fa 403 SUPERFAMILY SSF46689 291 337 2.24E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_23750 527046e2b4b486dde4e6ffdf5a66f6fa 403 Pfam PF14532 Sigma-54 interaction domain 41 192 7.6E-18 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JV59_23750 527046e2b4b486dde4e6ffdf5a66f6fa 403 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 343 386 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JV59_23750 527046e2b4b486dde4e6ffdf5a66f6fa 403 SUPERFAMILY SSF46689 342 393 1.21E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_23750 527046e2b4b486dde4e6ffdf5a66f6fa 403 Pfam PF12833 Helix-turn-helix domain 312 391 1.4E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_23750 527046e2b4b486dde4e6ffdf5a66f6fa 403 Gene3D G3DSA:1.10.10.60 339 396 2.0E-15 T 14-10-2018 JV59_23750 527046e2b4b486dde4e6ffdf5a66f6fa 403 SUPERFAMILY SSF52540 40 254 1.69E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_23750 527046e2b4b486dde4e6ffdf5a66f6fa 403 SMART SM00342 306 390 1.2E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_29620 2259b3ef868f2838072e4b0d9c52820a 281 Pfam PF01418 Helix-turn-helix domain, rpiR family 22 83 2.3E-9 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 JV59_29620 2259b3ef868f2838072e4b0d9c52820a 281 Gene3D G3DSA:3.40.50.10490 116 280 2.6E-25 T 14-10-2018 JV59_29620 2259b3ef868f2838072e4b0d9c52820a 281 SUPERFAMILY SSF46689 18 92 1.37E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_29620 2259b3ef868f2838072e4b0d9c52820a 281 SUPERFAMILY SSF53697 118 274 1.69E-20 T 14-10-2018 JV59_29620 2259b3ef868f2838072e4b0d9c52820a 281 Pfam PF01380 SIS domain 148 273 3.5E-15 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 JV59_29620 2259b3ef868f2838072e4b0d9c52820a 281 Gene3D G3DSA:1.10.10.10 15 89 6.7E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_17375 3ce2fe2657529f59b5da6dd3c078150d 345 SUPERFAMILY SSF81345 5 339 3.53E-84 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JV59_17375 3ce2fe2657529f59b5da6dd3c078150d 345 Gene3D G3DSA:1.10.3470.10 5 344 8.9E-105 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JV59_17375 3ce2fe2657529f59b5da6dd3c078150d 345 Pfam PF01032 FecCD transport family 19 339 5.5E-91 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 JV59_21100 2333303e3d4fb3336888b132131285de 279 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 66 198 4.1E-36 T 14-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 JV59_30120 314bf3fa23c43d125f665ddf5bad5027 242 Pfam PF00535 Glycosyl transferase family 2 5 114 2.1E-23 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 JV59_30120 314bf3fa23c43d125f665ddf5bad5027 242 Gene3D G3DSA:3.90.550.10 2 200 1.4E-35 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_30120 314bf3fa23c43d125f665ddf5bad5027 242 SUPERFAMILY SSF53448 3 223 3.0E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_20915 b1f35ed9abd0d309800b386353185429 141 SMART SM01034 3 96 5.1E-36 T 14-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 JV59_20915 b1f35ed9abd0d309800b386353185429 141 SUPERFAMILY SSF54975 3 139 1.89E-36 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 JV59_20915 b1f35ed9abd0d309800b386353185429 141 Pfam PF04940 Sensors of blue-light using FAD 3 95 2.0E-31 T 14-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 JV59_20915 b1f35ed9abd0d309800b386353185429 141 Gene3D G3DSA:3.30.70.3200 1 141 1.4E-36 T 14-10-2018 JV59_20350 9027f165d6aa70b3e73072f07141d0c6 256 Pfam PF04954 Siderophore-interacting protein 126 238 1.1E-30 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain JV59_20350 9027f165d6aa70b3e73072f07141d0c6 256 Gene3D G3DSA:2.40.30.10 1 118 4.1E-32 T 14-10-2018 JV59_20350 9027f165d6aa70b3e73072f07141d0c6 256 Gene3D G3DSA:3.40.50.80 121 256 4.0E-44 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JV59_20350 9027f165d6aa70b3e73072f07141d0c6 256 Pfam PF08021 Siderophore-interacting FAD-binding domain 11 118 3.2E-31 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting JV59_20350 9027f165d6aa70b3e73072f07141d0c6 256 SUPERFAMILY SSF63380 8 117 2.11E-8 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JV59_38460 fb6493a5c1d5d02cc3fa81031bdd43e2 446 SMART SM00155 347 374 0.012 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 JV59_38460 fb6493a5c1d5d02cc3fa81031bdd43e2 446 SMART SM00155 126 152 0.014 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 JV59_38460 fb6493a5c1d5d02cc3fa81031bdd43e2 446 Gene3D G3DSA:3.30.870.10 12 442 1.5E-167 T 14-10-2018 JV59_38460 fb6493a5c1d5d02cc3fa81031bdd43e2 446 SUPERFAMILY SSF56024 6 179 9.68E-27 T 14-10-2018 JV59_38460 fb6493a5c1d5d02cc3fa81031bdd43e2 446 Gene3D G3DSA:3.30.870.10 18 225 1.5E-167 T 14-10-2018 JV59_38460 fb6493a5c1d5d02cc3fa81031bdd43e2 446 PIRSF PIRSF000850 2 446 3.7E-217 T 14-10-2018 JV59_38460 fb6493a5c1d5d02cc3fa81031bdd43e2 446 SUPERFAMILY SSF56024 248 417 3.14E-25 T 14-10-2018 JV59_38460 fb6493a5c1d5d02cc3fa81031bdd43e2 446 Pfam PF13091 PLD-like domain 34 147 4.2E-7 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 JV59_38460 fb6493a5c1d5d02cc3fa81031bdd43e2 446 Pfam PF13091 PLD-like domain 251 402 1.2E-25 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 JV59_27370 796cf83bd930eeb4eb31fcf982a0a659 237 Gene3D G3DSA:2.60.40.4070 112 198 3.8E-37 T 14-10-2018 JV59_27370 796cf83bd930eeb4eb31fcf982a0a659 237 Pfam PF13860 FlgD Ig-like domain 119 186 1.9E-20 T 14-10-2018 IPR025965 FlgD Ig-like domain JV59_27370 796cf83bd930eeb4eb31fcf982a0a659 237 Pfam PF13861 FlgD Tudor-like domain 95 231 2.1E-14 T 14-10-2018 IPR025963 FlgD Tudor-like domain JV59_27370 796cf83bd930eeb4eb31fcf982a0a659 237 Gene3D G3DSA:2.30.30.910 96 224 3.8E-37 T 14-10-2018 JV59_27370 796cf83bd930eeb4eb31fcf982a0a659 237 Pfam PF03963 Flagellar hook capping protein - N-terminal region 24 86 6.3E-21 T 14-10-2018 IPR005648 Flagellar hook capping protein JV59_22350 962fbde9bce31e669f6c3913feb9f49e 301 Gene3D G3DSA:1.10.10.10 5 91 8.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_22350 962fbde9bce31e669f6c3913feb9f49e 301 Gene3D G3DSA:3.40.190.290 93 297 3.1E-55 T 14-10-2018 JV59_22350 962fbde9bce31e669f6c3913feb9f49e 301 SUPERFAMILY SSF46785 7 113 4.81E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_22350 962fbde9bce31e669f6c3913feb9f49e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_22350 962fbde9bce31e669f6c3913feb9f49e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_22350 962fbde9bce31e669f6c3913feb9f49e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_22350 962fbde9bce31e669f6c3913feb9f49e 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 5.0E-23 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_22350 962fbde9bce31e669f6c3913feb9f49e 301 SUPERFAMILY SSF53850 92 296 8.69E-39 T 14-10-2018 JV59_22350 962fbde9bce31e669f6c3913feb9f49e 301 Pfam PF03466 LysR substrate binding domain 91 296 2.3E-33 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_17360 aee982e67e25803836a95378dda45923 295 Pfam PF12833 Helix-turn-helix domain 214 293 3.3E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_17360 aee982e67e25803836a95378dda45923 295 Gene3D G3DSA:1.10.10.60 241 294 6.8E-17 T 14-10-2018 JV59_17360 aee982e67e25803836a95378dda45923 295 SUPERFAMILY SSF46689 244 294 3.0E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_17360 aee982e67e25803836a95378dda45923 295 SUPERFAMILY SSF46689 191 242 8.07E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_17360 aee982e67e25803836a95378dda45923 295 SMART SM00342 208 291 2.0E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_17360 aee982e67e25803836a95378dda45923 295 Gene3D G3DSA:1.10.10.60 190 240 1.7E-11 T 14-10-2018 JV59_00910 10df3a6cef4533496d6c04d3a13898f4 220 SUPERFAMILY SSF52540 8 200 1.13E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_00910 10df3a6cef4533496d6c04d3a13898f4 220 Gene3D G3DSA:3.40.50.300 1 216 4.3E-20 T 14-10-2018 JV59_20230 f5e8f9e5b7284387a372c9ad620b8b50 247 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 2 245 51.743 T 14-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 JV59_20230 f5e8f9e5b7284387a372c9ad620b8b50 247 SUPERFAMILY SSF89550 5 243 1.03E-57 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 JV59_20230 f5e8f9e5b7284387a372c9ad620b8b50 247 SMART SM00481 5 79 8.0E-10 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal JV59_20230 f5e8f9e5b7284387a372c9ad620b8b50 247 Gene3D G3DSA:3.20.20.140 3 247 9.6E-59 T 14-10-2018 JV59_33915 21ff5e039085afc9bb755e48e332f473 663 SUPERFAMILY SSF58104 354 663 2.22E-73 T 14-10-2018 JV59_33915 21ff5e039085afc9bb755e48e332f473 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 454 629 2.1E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_33915 21ff5e039085afc9bb755e48e332f473 663 SMART SM00283 401 662 3.2E-74 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_33915 21ff5e039085afc9bb755e48e332f473 663 SMART SM00304 334 386 1.7E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_33915 21ff5e039085afc9bb755e48e332f473 663 Gene3D G3DSA:1.10.287.950 334 663 8.0E-73 T 14-10-2018 JV59_33915 21ff5e039085afc9bb755e48e332f473 663 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 134 2.3E-9 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain JV59_33915 21ff5e039085afc9bb755e48e332f473 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 499 526 7.4E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_33915 21ff5e039085afc9bb755e48e332f473 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 528 557 7.4E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_33915 21ff5e039085afc9bb755e48e332f473 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 422 451 7.4E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_30075 37e2b6dd91f066707a20c0f2a7e2c274 90 Gene3D G3DSA:1.20.58.1000 1 90 1.9E-28 T 14-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily JV59_30075 37e2b6dd91f066707a20c0f2a7e2c274 90 Pfam PF02583 Metal-sensitive transcriptional repressor 8 85 7.2E-23 T 14-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 JV59_25135 41968f81ff0cfc340e6cbe02a98af381 193 TIGRFAM TIGR02742 TrbC_Ftype: type-F conjugative transfer system pilin assembly protein TrbC 60 189 1.5E-35 T 14-10-2018 IPR014113 Type-F conjugative transfer system pilin assembly protein TrbC, subgroup JV59_25135 41968f81ff0cfc340e6cbe02a98af381 193 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 62 172 4.6E-22 T 14-10-2018 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC JV59_40040 2358e4ad9c6e190e75423fc8d5cca945 205 Pfam PF01810 LysE type translocator 15 202 1.4E-34 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_40040 2358e4ad9c6e190e75423fc8d5cca945 205 PIRSF PIRSF006324 1 205 8.8E-57 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_40170 9ae1ee6cb56a1a6fe6533095b03a39d4 205 Pfam PF00717 Peptidase S24-like 117 183 6.8E-16 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C JV59_40170 9ae1ee6cb56a1a6fe6533095b03a39d4 205 SUPERFAMILY SSF51306 79 201 1.34E-36 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily JV59_40170 9ae1ee6cb56a1a6fe6533095b03a39d4 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 153 165 1.4E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 JV59_40170 9ae1ee6cb56a1a6fe6533095b03a39d4 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 114 124 1.4E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 JV59_40170 9ae1ee6cb56a1a6fe6533095b03a39d4 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 125 136 1.4E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 JV59_40170 9ae1ee6cb56a1a6fe6533095b03a39d4 205 Pfam PF01726 LexA DNA binding domain 1 65 4.4E-29 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 JV59_40170 9ae1ee6cb56a1a6fe6533095b03a39d4 205 Gene3D G3DSA:1.10.10.10 1 69 1.2E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_40170 9ae1ee6cb56a1a6fe6533095b03a39d4 205 Hamap MF_00015 LexA repressor [lexA]. 3 202 31.762 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 JV59_40170 9ae1ee6cb56a1a6fe6533095b03a39d4 205 SUPERFAMILY SSF46785 3 69 3.4E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_40170 9ae1ee6cb56a1a6fe6533095b03a39d4 205 Gene3D G3DSA:2.10.109.10 83 205 2.3E-43 T 14-10-2018 JV59_40170 9ae1ee6cb56a1a6fe6533095b03a39d4 205 TIGRFAM TIGR00498 lexA: repressor LexA 1 202 6.9E-81 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 JV59_39825 feb16e101b35662f22dc3baf2ce5bd5b 253 Pfam PF09836 Putative DNA-binding domain 7 96 3.5E-22 T 14-10-2018 IPR018640 Putative DNA-binding domain, bacteria JV59_24260 7d63f2ebe16a905bd94040b1c0eda20a 324 SMART SM00829 10 322 2.0E-10 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JV59_24260 7d63f2ebe16a905bd94040b1c0eda20a 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 90 2.7E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JV59_24260 7d63f2ebe16a905bd94040b1c0eda20a 324 Gene3D G3DSA:3.40.50.720 126 268 7.4E-73 T 14-10-2018 JV59_24260 7d63f2ebe16a905bd94040b1c0eda20a 324 Gene3D G3DSA:3.90.180.10 10 322 7.4E-73 T 14-10-2018 JV59_24260 7d63f2ebe16a905bd94040b1c0eda20a 324 SUPERFAMILY SSF51735 115 271 3.73E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_24260 7d63f2ebe16a905bd94040b1c0eda20a 324 SUPERFAMILY SSF50129 2 150 3.8E-26 T 14-10-2018 IPR011032 GroES-like superfamily JV59_24260 7d63f2ebe16a905bd94040b1c0eda20a 324 Pfam PF00107 Zinc-binding dehydrogenase 153 268 4.3E-19 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JV59_33755 2ff75af040887867ed6da6957965bde3 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 73 1.3E-15 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 JV59_33755 2ff75af040887867ed6da6957965bde3 246 SUPERFAMILY SSF161098 11 233 2.75E-40 T 14-10-2018 IPR035906 MetI-like superfamily JV59_33755 2ff75af040887867ed6da6957965bde3 246 Gene3D G3DSA:1.10.3720.10 3 243 8.8E-50 T 14-10-2018 IPR035906 MetI-like superfamily JV59_33755 2ff75af040887867ed6da6957965bde3 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 241 3.4E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_02055 cf0b4a96f60c951fe2d8845c623e94d8 353 Gene3D G3DSA:3.40.50.2000 161 318 9.4E-122 T 14-10-2018 JV59_02055 cf0b4a96f60c951fe2d8845c623e94d8 353 SUPERFAMILY SSF53756 5 352 6.1E-127 T 14-10-2018 JV59_02055 cf0b4a96f60c951fe2d8845c623e94d8 353 Gene3D G3DSA:3.40.50.2000 8 160 9.4E-122 T 14-10-2018 JV59_02055 cf0b4a96f60c951fe2d8845c623e94d8 353 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 6.6E-47 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JV59_02055 cf0b4a96f60c951fe2d8845c623e94d8 353 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 352 35.148 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JV59_02055 cf0b4a96f60c951fe2d8845c623e94d8 353 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 4.0E-118 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JV59_02055 cf0b4a96f60c951fe2d8845c623e94d8 353 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 336 2.0E-35 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 JV59_20830 5bd0d81498968b5ef5e18aba22ae5e23 235 SUPERFAMILY SSF51735 3 235 1.1E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_20830 5bd0d81498968b5ef5e18aba22ae5e23 235 Gene3D G3DSA:3.40.50.720 2 235 8.9E-44 T 14-10-2018 JV59_20830 5bd0d81498968b5ef5e18aba22ae5e23 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 66 77 2.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_20830 5bd0d81498968b5ef5e18aba22ae5e23 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 2.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_20830 5bd0d81498968b5ef5e18aba22ae5e23 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 2.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_20830 5bd0d81498968b5ef5e18aba22ae5e23 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_20830 5bd0d81498968b5ef5e18aba22ae5e23 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 2.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_20830 5bd0d81498968b5ef5e18aba22ae5e23 235 Pfam PF00106 short chain dehydrogenase 3 193 4.9E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_30785 c3d7b647d140031fa97a6d816dfe6f54 248 Pfam PF03942 DTW domain 29 216 4.6E-41 T 14-10-2018 IPR005636 DTW JV59_30785 c3d7b647d140031fa97a6d816dfe6f54 248 SMART SM01144 27 222 7.5E-60 T 14-10-2018 IPR005636 DTW JV59_19780 018807c88f4a5ae7a64a5a3501711c6d 320 Gene3D G3DSA:3.10.450.350 129 294 1.5E-48 T 14-10-2018 JV59_19780 018807c88f4a5ae7a64a5a3501711c6d 320 Pfam PF01551 Peptidase family M23 192 285 2.8E-30 T 14-10-2018 IPR016047 Peptidase M23 JV59_19780 018807c88f4a5ae7a64a5a3501711c6d 320 Gene3D G3DSA:2.70.70.10 161 292 1.5E-48 T 14-10-2018 IPR011055 Duplicated hybrid motif JV59_19780 018807c88f4a5ae7a64a5a3501711c6d 320 SUPERFAMILY SSF51261 62 285 1.15E-51 T 14-10-2018 IPR011055 Duplicated hybrid motif JV59_30400 bcf6033b14de5b28af6bc1f2e5306ecd 205 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 125 203 2.2E-20 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 JV59_30400 bcf6033b14de5b28af6bc1f2e5306ecd 205 Gene3D G3DSA:3.30.1150.10 102 205 1.9E-28 T 14-10-2018 JV59_30400 bcf6033b14de5b28af6bc1f2e5306ecd 205 PRINTS PR01374 Gram-negative bacterial tonB protein signature 141 159 2.2E-12 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 JV59_30400 bcf6033b14de5b28af6bc1f2e5306ecd 205 PRINTS PR01374 Gram-negative bacterial tonB protein signature 160 177 2.2E-12 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 JV59_30400 bcf6033b14de5b28af6bc1f2e5306ecd 205 PRINTS PR01374 Gram-negative bacterial tonB protein signature 120 141 2.2E-12 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 JV59_30400 bcf6033b14de5b28af6bc1f2e5306ecd 205 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 126 203 2.4E-19 T 14-10-2018 IPR006260 TonB/TolA, C-terminal JV59_30400 bcf6033b14de5b28af6bc1f2e5306ecd 205 SUPERFAMILY SSF74653 117 194 6.28E-24 T 14-10-2018 JV59_01525 3fa2e0adb95d66c5fec1f4614b3c7e27 264 SUPERFAMILY SSF51621 3 262 2.65E-104 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JV59_01525 3fa2e0adb95d66c5fec1f4614b3c7e27 264 PIRSF PIRSF000388 1 264 5.7E-101 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 JV59_01525 3fa2e0adb95d66c5fec1f4614b3c7e27 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 262 1.0E-111 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 JV59_01525 3fa2e0adb95d66c5fec1f4614b3c7e27 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 40.74 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 JV59_01525 3fa2e0adb95d66c5fec1f4614b3c7e27 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 2.5E-106 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 JV59_01525 3fa2e0adb95d66c5fec1f4614b3c7e27 264 Gene3D G3DSA:3.20.20.60 1 263 1.2E-104 T 14-10-2018 JV59_19875 b464fc35a816f3c1c7402b34558ae482 138 Gene3D G3DSA:3.10.290.10 8 83 2.5E-21 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 JV59_19875 b464fc35a816f3c1c7402b34558ae482 138 SUPERFAMILY SSF55174 9 82 4.71E-18 T 14-10-2018 JV59_19875 b464fc35a816f3c1c7402b34558ae482 138 Pfam PF13275 S4 domain 18 81 2.6E-22 T 14-10-2018 JV59_28465 f64805f4be4fb2ddddc6942c75f091c0 288 SUPERFAMILY SSF117396 5 265 2.35E-74 T 14-10-2018 IPR036520 UPF0759 superfamily JV59_28465 f64805f4be4fb2ddddc6942c75f091c0 288 Pfam PF01904 Protein of unknown function DUF72 23 262 1.1E-56 T 14-10-2018 IPR002763 Protein of unknown function DUF72 JV59_28465 f64805f4be4fb2ddddc6942c75f091c0 288 Gene3D G3DSA:3.20.20.410 3 273 1.2E-46 T 14-10-2018 IPR036520 UPF0759 superfamily JV59_24595 a28970209f0312c00cfcbf1fe72a44b4 156 Gene3D G3DSA:3.40.630.30 1 137 3.9E-17 T 14-10-2018 JV59_24595 a28970209f0312c00cfcbf1fe72a44b4 156 Pfam PF13508 Acetyltransferase (GNAT) domain 45 127 7.6E-8 T 14-10-2018 IPR000182 GNAT domain JV59_24595 a28970209f0312c00cfcbf1fe72a44b4 156 SUPERFAMILY SSF55729 1 135 7.44E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_18105 9084eaa55e78fda4fcf376fd12b29293 252 Gene3D G3DSA:3.40.50.720 1 250 1.5E-31 T 14-10-2018 JV59_18105 9084eaa55e78fda4fcf376fd12b29293 252 SUPERFAMILY SSF51735 2 249 3.15E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_18105 9084eaa55e78fda4fcf376fd12b29293 252 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 202 221 2.1E-7 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 JV59_18105 9084eaa55e78fda4fcf376fd12b29293 252 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 8 25 2.1E-7 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 JV59_18105 9084eaa55e78fda4fcf376fd12b29293 252 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 162 185 2.1E-7 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 JV59_18105 9084eaa55e78fda4fcf376fd12b29293 252 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 228 247 2.1E-7 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 JV59_18105 9084eaa55e78fda4fcf376fd12b29293 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 249 3.1E-22 T 14-10-2018 JV59_16990 9853f99bcc878a19097baa2b0ff4fd31 700 Gene3D G3DSA:3.40.30.10 582 694 2.4E-8 T 14-10-2018 JV59_16990 9853f99bcc878a19097baa2b0ff4fd31 700 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 307 514 2.0E-14 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 JV59_16990 9853f99bcc878a19097baa2b0ff4fd31 700 Pfam PF13899 Thioredoxin-like 585 671 4.8E-10 T 14-10-2018 JV59_16990 9853f99bcc878a19097baa2b0ff4fd31 700 SUPERFAMILY SSF52833 577 676 7.48E-13 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_16990 9853f99bcc878a19097baa2b0ff4fd31 700 Pfam PF11412 Disulphide bond corrector protein DsbC 54 164 9.1E-16 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain JV59_18945 c2fb6e3c826920154ea7f0854c6c652d 209 Pfam PF07947 YhhN family 24 204 1.1E-41 T 14-10-2018 IPR012506 YhhN-like GO:0016021 JV59_16480 615e1e0ab22aa2e7251ca925791f321f 476 Pfam PF13440 Polysaccharide biosynthesis protein 27 314 3.6E-19 T 14-10-2018 JV59_16480 615e1e0ab22aa2e7251ca925791f321f 476 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 327 457 5.3E-9 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain JV59_17795 866cfcebef297029b9415794e4b873da 113 Pfam PF01022 Bacterial regulatory protein, arsR family 35 83 1.2E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_17795 866cfcebef297029b9415794e4b873da 113 Gene3D G3DSA:1.10.10.10 22 113 1.3E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_17795 866cfcebef297029b9415794e4b873da 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 1.9E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_17795 866cfcebef297029b9415794e4b873da 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 45 1.9E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_17795 866cfcebef297029b9415794e4b873da 113 SUPERFAMILY SSF46785 24 109 6.23E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_17795 866cfcebef297029b9415794e4b873da 113 SMART SM00418 28 106 3.6E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JV59_01630 c24af7bd6ed90cfddc34ea92468f2169 331 Gene3D G3DSA:3.40.50.300 8 331 3.5E-80 T 14-10-2018 JV59_01630 c24af7bd6ed90cfddc34ea92468f2169 331 SMART SM00382 43 241 1.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_01630 c24af7bd6ed90cfddc34ea92468f2169 331 SUPERFAMILY SSF52540 10 262 1.28E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_01630 c24af7bd6ed90cfddc34ea92468f2169 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 1.1E-23 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JV59_01630 c24af7bd6ed90cfddc34ea92468f2169 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_01630 c24af7bd6ed90cfddc34ea92468f2169 331 Pfam PF00005 ABC transporter 35 192 1.3E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_01630 c24af7bd6ed90cfddc34ea92468f2169 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 1.4E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JV59_30555 27100e1a0d3e06072e235621a9e09149 468 Pfam PF01212 Beta-eliminating lyase 46 434 2.4E-82 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 JV59_30555 27100e1a0d3e06072e235621a9e09149 468 Gene3D G3DSA:3.90.1150.10 7 465 9.4E-191 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_30555 27100e1a0d3e06072e235621a9e09149 468 Gene3D G3DSA:3.40.640.10 58 331 9.4E-191 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_30555 27100e1a0d3e06072e235621a9e09149 468 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 257 275 - T 14-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 JV59_30555 27100e1a0d3e06072e235621a9e09149 468 PIRSF PIRSF001386 1 468 2.2E-195 T 14-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 JV59_30555 27100e1a0d3e06072e235621a9e09149 468 SUPERFAMILY SSF53383 2 468 3.66E-124 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_33970 612da3284df6e7c80c094b88d7b1eee8 335 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 175 333 1.0E-33 T 14-10-2018 IPR000160 GGDEF domain JV59_33970 612da3284df6e7c80c094b88d7b1eee8 335 Pfam PF00990 Diguanylate cyclase, GGDEF domain 177 331 1.2E-30 T 14-10-2018 IPR000160 GGDEF domain JV59_33970 612da3284df6e7c80c094b88d7b1eee8 335 SUPERFAMILY SSF55073 182 333 1.18E-34 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_33970 612da3284df6e7c80c094b88d7b1eee8 335 Gene3D G3DSA:3.30.70.270 166 334 1.6E-40 T 14-10-2018 JV59_33970 612da3284df6e7c80c094b88d7b1eee8 335 SMART SM00267 166 335 6.3E-36 T 14-10-2018 IPR000160 GGDEF domain JV59_21390 8e62b0ba83e64ec3254a53dcfded0108 326 SUPERFAMILY SSF56281 1 309 3.93E-68 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JV59_21390 8e62b0ba83e64ec3254a53dcfded0108 326 Gene3D G3DSA:3.60.15.10 1 308 7.0E-83 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JV59_21390 8e62b0ba83e64ec3254a53dcfded0108 326 Pfam PF12706 Beta-lactamase superfamily domain 32 143 7.3E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase JV59_21390 8e62b0ba83e64ec3254a53dcfded0108 326 Hamap MF_01818 Ribonuclease BN [rbn]. 1 308 32.459 T 14-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 JV59_01845 c9c9fd4c268d2e3579d91b8245618db8 137 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 111 26.339 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 JV59_01845 c9c9fd4c268d2e3579d91b8245618db8 137 Pfam PF02033 Ribosome-binding factor A 7 110 2.6E-30 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 JV59_01845 c9c9fd4c268d2e3579d91b8245618db8 137 SUPERFAMILY SSF89919 2 105 9.42E-32 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily JV59_01845 c9c9fd4c268d2e3579d91b8245618db8 137 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 1.0E-45 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 JV59_01845 c9c9fd4c268d2e3579d91b8245618db8 137 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 JV59_01845 c9c9fd4c268d2e3579d91b8245618db8 137 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 116 2.1E-35 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 JV59_01845 c9c9fd4c268d2e3579d91b8245618db8 137 Gene3D G3DSA:3.30.300.20 1 106 3.0E-35 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta JV59_23625 33b3fb9cc1f95ecf562eef3c0238d641 83 Pfam PF11280 Protein of unknown function (DUF3081) 5 81 2.7E-29 T 14-10-2018 IPR021432 Protein of unknown function DUF3081 JV59_02485 33b918d3a6ece44ca836e72d095f4012 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 452 1.2E-135 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 JV59_02485 33b918d3a6ece44ca836e72d095f4012 452 Pfam PF02163 Peptidase family M50 11 440 1.1E-86 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 JV59_02485 33b918d3a6ece44ca836e72d095f4012 452 SUPERFAMILY SSF50156 90 186 6.18E-12 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 JV59_02485 33b918d3a6ece44ca836e72d095f4012 452 Gene3D G3DSA:2.30.42.10 126 221 9.1E-31 T 14-10-2018 JV59_02485 33b918d3a6ece44ca836e72d095f4012 452 Pfam PF13180 PDZ domain 225 286 3.0E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JV59_02485 33b918d3a6ece44ca836e72d095f4012 452 SMART SM00228 115 186 0.39 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JV59_02485 33b918d3a6ece44ca836e72d095f4012 452 SMART SM00228 212 281 9.0E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 JV59_02485 33b918d3a6ece44ca836e72d095f4012 452 SUPERFAMILY SSF50156 197 291 5.13E-16 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 JV59_02485 33b918d3a6ece44ca836e72d095f4012 452 Gene3D G3DSA:2.30.42.10 223 313 4.0E-19 T 14-10-2018 JV59_00765 1922ab47680b28af28c5dbbc721f1483 1291 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 6 1279 0.0 T 14-10-2018 IPR011836 Conserved hypothetical protein CHP02099 JV59_00765 1922ab47680b28af28c5dbbc721f1483 1291 Pfam PF13502 AsmA-like C-terminal region 1029 1268 1.8E-59 T 14-10-2018 IPR032712 AsmA-like, C-terminal JV59_00765 1922ab47680b28af28c5dbbc721f1483 1291 Pfam PF13116 Protein of unknown function 505 791 1.5E-90 T 14-10-2018 IPR025263 Domain of unknown function DUF3971 JV59_26800 b37e13926f9d4e76bf189e3ed611d44e 158 PIRSF PIRSF006092 1 158 6.9E-9 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 JV59_26800 b37e13926f9d4e76bf189e3ed611d44e 158 SUPERFAMILY SSF54534 80 157 3.4E-10 T 14-10-2018 JV59_26800 b37e13926f9d4e76bf189e3ed611d44e 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 79 157 2.6E-7 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 JV59_26800 b37e13926f9d4e76bf189e3ed611d44e 158 Gene3D G3DSA:3.10.50.30 75 158 3.7E-6 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 JV59_21720 29b957141860387419cde85ea91fed1c 249 SMART SM00382 28 220 9.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_21720 29b957141860387419cde85ea91fed1c 249 Gene3D G3DSA:3.40.50.300 4 246 1.5E-61 T 14-10-2018 JV59_21720 29b957141860387419cde85ea91fed1c 249 Pfam PF00005 ABC transporter 19 174 1.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_21720 29b957141860387419cde85ea91fed1c 249 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 4 249 1.4E-125 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 JV59_21720 29b957141860387419cde85ea91fed1c 249 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_21720 29b957141860387419cde85ea91fed1c 249 SUPERFAMILY SSF52540 4 236 6.39E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_00070 9cd17177a326d109a118cac5f6520feb 196 Pfam PF04350 Pilus assembly protein, PilO 48 187 4.5E-15 T 14-10-2018 IPR007445 Pilus assembly protein, PilO JV59_00070 9cd17177a326d109a118cac5f6520feb 196 Gene3D G3DSA:3.30.70.60 94 196 2.7E-9 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 JV59_37835 ef5d73d4af52243b9cbaa8fbce4649fd 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.7 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_37835 ef5d73d4af52243b9cbaa8fbce4649fd 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 5.2E-43 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37835 ef5d73d4af52243b9cbaa8fbce4649fd 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 1.7E-43 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_37835 ef5d73d4af52243b9cbaa8fbce4649fd 117 Gene3D G3DSA:3.30.420.100 1 117 2.1E-43 T 14-10-2018 JV59_37835 ef5d73d4af52243b9cbaa8fbce4649fd 117 SUPERFAMILY SSF53137 3 115 8.29E-51 T 14-10-2018 JV59_22385 67ebf6a374ca96ea6949c0ff96e97aa8 141 SUPERFAMILY SSF54593 4 134 7.01E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_22385 67ebf6a374ca96ea6949c0ff96e97aa8 141 Gene3D G3DSA:3.10.180.10 2 141 1.7E-47 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_22385 67ebf6a374ca96ea6949c0ff96e97aa8 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 4.5E-13 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JV59_32330 3b197de6e6851cdeab449dcce35ee034 142 SUPERFAMILY SSF55166 4 140 1.1E-12 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JV59_32330 3b197de6e6851cdeab449dcce35ee034 142 Gene3D G3DSA:3.30.1380.10 8 139 3.5E-13 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JV59_32330 3b197de6e6851cdeab449dcce35ee034 142 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 60 139 6.3E-7 T 14-10-2018 IPR039561 Peptidase M15C GO:0008233 JV59_22255 7a5f36a5670f1b5fc788597904be1f16 232 PIRSF PIRSF028137 1 231 1.5E-106 T 14-10-2018 IPR016870 Uncharacterised conserved protein UCP028137, membrane JV59_20920 6d53101cbd2d02c66c4d42cecaf857ef 311 SUPERFAMILY SSF103481 198 295 1.03E-10 T 14-10-2018 JV59_20920 6d53101cbd2d02c66c4d42cecaf857ef 311 SUPERFAMILY SSF103481 40 140 3.01E-9 T 14-10-2018 JV59_20920 6d53101cbd2d02c66c4d42cecaf857ef 311 Pfam PF00892 EamA-like transporter family 9 139 5.2E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_20920 6d53101cbd2d02c66c4d42cecaf857ef 311 Pfam PF00892 EamA-like transporter family 163 291 3.1E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_17855 c5705988e22c82fe0d375ac0152d1dee 230 SUPERFAMILY SSF82649 56 101 7.33E-8 T 14-10-2018 JV59_17855 c5705988e22c82fe0d375ac0152d1dee 230 Pfam PF01592 NifU-like N terminal domain 56 101 1.8E-5 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 JV59_17855 c5705988e22c82fe0d375ac0152d1dee 230 Gene3D G3DSA:3.90.1010.10 43 116 1.9E-7 T 14-10-2018 JV59_27265 c3322ca13e0a39204dab49f9743e3ee7 218 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 22 211 4.4E-35 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 JV59_32450 f64460ff3d2eed8fce2370341d7eeb73 391 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 6 390 51.707 T 14-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 JV59_32450 f64460ff3d2eed8fce2370341d7eeb73 391 Pfam PF01370 NAD dependent epimerase/dehydratase family 17 79 5.8E-6 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JV59_32450 f64460ff3d2eed8fce2370341d7eeb73 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 389 9.7E-188 T 14-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 JV59_32450 f64460ff3d2eed8fce2370341d7eeb73 391 Gene3D G3DSA:3.30.1490.20 121 194 9.3E-33 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JV59_32450 f64460ff3d2eed8fce2370341d7eeb73 391 SUPERFAMILY SSF56059 111 312 1.94E-55 T 14-10-2018 JV59_32450 f64460ff3d2eed8fce2370341d7eeb73 391 Gene3D G3DSA:3.40.50.20 1 120 5.3E-54 T 14-10-2018 JV59_32450 f64460ff3d2eed8fce2370341d7eeb73 391 Gene3D G3DSA:3.30.470.20 195 389 1.9E-59 T 14-10-2018 JV59_32450 f64460ff3d2eed8fce2370341d7eeb73 391 Pfam PF02222 ATP-grasp domain 121 292 1.7E-56 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type JV59_32450 f64460ff3d2eed8fce2370341d7eeb73 391 SUPERFAMILY SSF51246 317 389 9.57E-17 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 JV59_32450 f64460ff3d2eed8fce2370341d7eeb73 391 SUPERFAMILY SSF52440 2 110 3.02E-35 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JV59_18695 34bee96a214af666f3723376a934bce6 232 Gene3D G3DSA:3.40.190.10 108 195 9.1E-10 T 14-10-2018 JV59_18695 34bee96a214af666f3723376a934bce6 232 SUPERFAMILY SSF53850 51 223 1.49E-15 T 14-10-2018 JV59_18695 34bee96a214af666f3723376a934bce6 232 Gene3D G3DSA:3.40.190.10 53 223 9.1E-10 T 14-10-2018 JV59_21475 6b52ebf5ae29b3a5f17b4c6a395c52df 388 Gene3D G3DSA:1.20.1250.20 9 378 3.2E-34 T 14-10-2018 JV59_21475 6b52ebf5ae29b3a5f17b4c6a395c52df 388 Pfam PF07690 Major Facilitator Superfamily 14 256 3.5E-24 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_21475 6b52ebf5ae29b3a5f17b4c6a395c52df 388 SUPERFAMILY SSF103473 11 382 4.71E-39 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_34025 9ccb4886d79779e88bb9bed9ad64f0a3 556 SUPERFAMILY SSF53383 74 552 1.08E-70 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_34025 9ccb4886d79779e88bb9bed9ad64f0a3 556 Gene3D G3DSA:3.40.640.10 116 441 1.4E-60 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_34025 9ccb4886d79779e88bb9bed9ad64f0a3 556 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 91 462 2.4E-31 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 JV59_31800 41b2731d510e71fa940afa618240404a 397 SMART SM00359 3 87 2.7E-15 T 14-10-2018 IPR002478 PUA domain GO:0003723 JV59_31800 41b2731d510e71fa940afa618240404a 397 Gene3D G3DSA:3.30.750.80 73 180 5.7E-37 T 14-10-2018 JV59_31800 41b2731d510e71fa940afa618240404a 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 110 376 6.5E-30 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 JV59_31800 41b2731d510e71fa940afa618240404a 397 SUPERFAMILY SSF53335 78 393 1.49E-69 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_31800 41b2731d510e71fa940afa618240404a 397 Gene3D G3DSA:2.30.130.10 2 72 2.8E-29 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 JV59_31800 41b2731d510e71fa940afa618240404a 397 SUPERFAMILY SSF88697 3 73 1.71E-18 T 14-10-2018 IPR015947 PUA-like superfamily JV59_31800 41b2731d510e71fa940afa618240404a 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 397 68.437 T 14-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 JV59_31800 41b2731d510e71fa940afa618240404a 397 Gene3D G3DSA:3.40.50.150 181 397 1.8E-69 T 14-10-2018 JV59_33645 45eabb4d95cca8ef748b87022785ed36 548 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 6 527 1.2E-296 T 14-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 JV59_33645 45eabb4d95cca8ef748b87022785ed36 548 Gene3D G3DSA:3.40.640.10 122 387 8.4E-114 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_33645 45eabb4d95cca8ef748b87022785ed36 548 SUPERFAMILY SSF53383 26 530 4.59E-116 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_33645 45eabb4d95cca8ef748b87022785ed36 548 Gene3D G3DSA:3.90.1150.170 49 523 8.4E-114 T 14-10-2018 JV59_33645 45eabb4d95cca8ef748b87022785ed36 548 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 62 442 1.7E-56 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 JV59_26840 4ddd17410299fe6c60b64bdda210766a 156 SUPERFAMILY SSF52121 4 154 2.22E-60 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JV59_26840 4ddd17410299fe6c60b64bdda210766a 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 1.0E-54 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JV59_26840 4ddd17410299fe6c60b64bdda210766a 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 4.8E-57 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JV59_26840 4ddd17410299fe6c60b64bdda210766a 156 Gene3D G3DSA:3.40.50.960 1 156 1.1E-63 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JV59_26840 4ddd17410299fe6c60b64bdda210766a 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.122 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JV59_24125 03e0e91d04c4fb97d3d765cf3ff38591 324 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 8 321 3.9E-116 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family JV59_24125 03e0e91d04c4fb97d3d765cf3ff38591 324 SUPERFAMILY SSF53850 28 323 8.99E-91 T 14-10-2018 JV59_24125 03e0e91d04c4fb97d3d765cf3ff38591 324 Gene3D G3DSA:3.40.190.10 119 257 4.4E-110 T 14-10-2018 JV59_24125 03e0e91d04c4fb97d3d765cf3ff38591 324 Gene3D G3DSA:3.40.190.10 32 321 4.4E-110 T 14-10-2018 JV59_24125 03e0e91d04c4fb97d3d765cf3ff38591 324 Pfam PF16868 NMT1-like family 32 321 1.7E-98 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family JV59_30470 29ecd9fc931137eb11de977f46f8eafa 160 Pfam PF01936 NYN domain 3 151 3.5E-39 T 14-10-2018 IPR021139 NYN domain, limkain-b1-type JV59_30470 29ecd9fc931137eb11de977f46f8eafa 160 Gene3D G3DSA:3.40.50.1010 1 157 5.5E-56 T 14-10-2018 JV59_20875 38bb0980cf90e2f623f5b243aa89fe80 122 Pfam PF01521 Iron-sulphur cluster biosynthesis 21 118 2.2E-16 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 JV59_20875 38bb0980cf90e2f623f5b243aa89fe80 122 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 103 120 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 JV59_20875 38bb0980cf90e2f623f5b243aa89fe80 122 Gene3D G3DSA:2.60.300.12 20 122 5.2E-27 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 JV59_20875 38bb0980cf90e2f623f5b243aa89fe80 122 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 21 121 1.7E-26 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 JV59_20875 38bb0980cf90e2f623f5b243aa89fe80 122 SUPERFAMILY SSF89360 21 111 1.33E-21 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 JV59_27170 4f7908eea6f1c983651c522daf257d9a 150 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 149 1.7E-24 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain JV59_27170 4f7908eea6f1c983651c522daf257d9a 150 Gene3D G3DSA:2.40.50.140 80 150 1.1E-10 T 14-10-2018 JV59_27170 4f7908eea6f1c983651c522daf257d9a 150 SUPERFAMILY SSF141322 87 147 6.8E-5 T 14-10-2018 JV59_29445 e1f33321317c8eec67e61fc7d1eb60d9 503 Gene3D G3DSA:3.40.309.10 249 453 4.6E-153 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JV59_29445 e1f33321317c8eec67e61fc7d1eb60d9 503 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 JV59_29445 e1f33321317c8eec67e61fc7d1eb60d9 503 Pfam PF00171 Aldehyde dehydrogenase family 16 480 1.3E-139 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JV59_29445 e1f33321317c8eec67e61fc7d1eb60d9 503 SUPERFAMILY SSF53720 2 484 1.31E-148 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JV59_29445 e1f33321317c8eec67e61fc7d1eb60d9 503 Gene3D G3DSA:3.40.605.10 23 461 4.6E-153 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JV59_29445 e1f33321317c8eec67e61fc7d1eb60d9 503 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 4 484 6.7E-208 T 14-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 JV59_23390 07349455508446c1290560f3bb42b438 276 Gene3D G3DSA:3.40.1190.20 1 275 1.5E-102 T 14-10-2018 IPR029056 Ribokinase-like JV59_23390 07349455508446c1290560f3bb42b438 276 SUPERFAMILY SSF53613 7 269 2.18E-81 T 14-10-2018 IPR029056 Ribokinase-like JV59_23390 07349455508446c1290560f3bb42b438 276 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 11 268 5.3E-101 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 JV59_23390 07349455508446c1290560f3bb42b438 276 Pfam PF08543 Phosphomethylpyrimidine kinase 18 266 5.7E-95 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 JV59_01140 709955b32f1ef6503d3149fce60853bf 650 Gene3D G3DSA:3.40.50.2300 371 476 4.0E-36 T 14-10-2018 JV59_01140 709955b32f1ef6503d3149fce60853bf 650 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 386 466 1.1E-11 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 JV59_01140 709955b32f1ef6503d3149fce60853bf 650 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 550 566 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain JV59_01140 709955b32f1ef6503d3149fce60853bf 650 Gene3D G3DSA:3.40.930.10 502 646 5.9E-50 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 JV59_01140 709955b32f1ef6503d3149fce60853bf 650 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 345 2.3E-167 T 14-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 JV59_01140 709955b32f1ef6503d3149fce60853bf 650 SUPERFAMILY SSF52794 383 472 9.55E-26 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 JV59_01140 709955b32f1ef6503d3149fce60853bf 650 Pfam PF02378 Phosphotransferase system, EIIC 18 278 2.2E-18 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 JV59_01140 709955b32f1ef6503d3149fce60853bf 650 SUPERFAMILY SSF55804 506 645 6.02E-40 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 JV59_01140 709955b32f1ef6503d3149fce60853bf 650 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 508 644 5.2E-33 T 14-10-2018 IPR002178 PTS EIIA type-2 domain JV59_21240 c2021c0083ac23454088dd265d8de919 196 Gene3D G3DSA:3.40.630.30 15 189 4.6E-34 T 14-10-2018 JV59_21240 c2021c0083ac23454088dd265d8de919 196 SUPERFAMILY SSF55729 15 186 2.76E-33 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_21240 c2021c0083ac23454088dd265d8de919 196 Pfam PF13302 Acetyltransferase (GNAT) domain 19 162 2.9E-21 T 14-10-2018 IPR000182 GNAT domain JV59_26745 b1c7a04a444c4c3cb485e058d364e9c9 269 SUPERFAMILY SSF111364 30 269 3.53E-84 T 14-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 JV59_26745 b1c7a04a444c4c3cb485e058d364e9c9 269 Gene3D G3DSA:2.40.230.20 23 269 5.7E-80 T 14-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 JV59_26745 b1c7a04a444c4c3cb485e058d364e9c9 269 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 30 269 1.9E-97 T 14-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 JV59_18490 8fbcf21c9c32518e5e01e04cc0dd8fab 327 Pfam PF02780 Transketolase, C-terminal domain 198 315 6.3E-37 T 14-10-2018 IPR033248 Transketolase, C-terminal domain JV59_18490 8fbcf21c9c32518e5e01e04cc0dd8fab 327 Gene3D G3DSA:3.40.50.970 1 191 5.1E-74 T 14-10-2018 JV59_18490 8fbcf21c9c32518e5e01e04cc0dd8fab 327 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 6.0E-48 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JV59_18490 8fbcf21c9c32518e5e01e04cc0dd8fab 327 SUPERFAMILY SSF52518 3 188 6.96E-64 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold JV59_18490 8fbcf21c9c32518e5e01e04cc0dd8fab 327 SMART SM00861 4 179 3.5E-62 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JV59_18490 8fbcf21c9c32518e5e01e04cc0dd8fab 327 Gene3D G3DSA:3.40.50.920 192 325 2.1E-43 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JV59_18490 8fbcf21c9c32518e5e01e04cc0dd8fab 327 SUPERFAMILY SSF52922 190 323 1.31E-37 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JV59_20925 03b0bc0615876bc003c5881d6c1a8a79 161 SMART SM00344 12 118 5.4E-28 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 JV59_20925 03b0bc0615876bc003c5881d6c1a8a79 161 Pfam PF13404 AsnC-type helix-turn-helix domain 12 53 1.5E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_20925 03b0bc0615876bc003c5881d6c1a8a79 161 Pfam PF01037 Lrp/AsnC ligand binding domain 84 144 9.3E-11 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JV59_20925 03b0bc0615876bc003c5881d6c1a8a79 161 Gene3D G3DSA:3.30.70.920 64 149 5.3E-17 T 14-10-2018 JV59_20925 03b0bc0615876bc003c5881d6c1a8a79 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 1.6E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_20925 03b0bc0615876bc003c5881d6c1a8a79 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 1.6E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_20925 03b0bc0615876bc003c5881d6c1a8a79 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 1.6E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_20925 03b0bc0615876bc003c5881d6c1a8a79 161 Gene3D G3DSA:1.10.10.10 1 63 8.6E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_20925 03b0bc0615876bc003c5881d6c1a8a79 161 SUPERFAMILY SSF46785 11 72 1.58E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_20925 03b0bc0615876bc003c5881d6c1a8a79 161 SUPERFAMILY SSF54909 74 147 1.18E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_33735 76185dfc41bb0b85b75b7cf12d3df753 342 Gene3D G3DSA:1.10.443.10 171 341 1.6E-35 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JV59_33735 76185dfc41bb0b85b75b7cf12d3df753 342 SUPERFAMILY SSF56349 65 330 9.03E-42 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JV59_33735 76185dfc41bb0b85b75b7cf12d3df753 342 Pfam PF00589 Phage integrase family 176 323 2.0E-20 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JV59_25250 4ce16ee93b6aa37b36eddf87b643f800 424 SUPERFAMILY SSF56801 165 415 4.97E-16 T 14-10-2018 JV59_25250 4ce16ee93b6aa37b36eddf87b643f800 424 Gene3D G3DSA:3.40.50.12780 11 328 6.3E-56 T 14-10-2018 JV59_37025 7aabdc71156d359855ba473052c22eb6 102 Pfam PF05164 Cell division protein ZapA 6 89 1.3E-18 T 14-10-2018 IPR007838 Cell division protein ZapA-like JV59_37025 7aabdc71156d359855ba473052c22eb6 102 SUPERFAMILY SSF102829 6 95 8.63E-21 T 14-10-2018 IPR036192 Cell division protein ZapA-like superfamily JV59_37025 7aabdc71156d359855ba473052c22eb6 102 Gene3D G3DSA:1.10.20.30 1 47 2.4E-18 T 14-10-2018 JV59_19520 5202a86944a3cef12ba9e0a2e7fcfd9e 393 SUPERFAMILY SSF53383 1 392 6.29E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_19520 5202a86944a3cef12ba9e0a2e7fcfd9e 393 Gene3D G3DSA:3.40.640.10 45 312 7.2E-136 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_19520 5202a86944a3cef12ba9e0a2e7fcfd9e 393 Gene3D G3DSA:3.90.1150.10 11 389 7.2E-136 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_19520 5202a86944a3cef12ba9e0a2e7fcfd9e 393 Pfam PF00155 Aminotransferase class I and II 27 389 1.8E-64 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JV59_19520 5202a86944a3cef12ba9e0a2e7fcfd9e 393 PRINTS PR00799 Aspartate aminotransferase signature 270 295 2.8E-28 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 JV59_19520 5202a86944a3cef12ba9e0a2e7fcfd9e 393 PRINTS PR00799 Aspartate aminotransferase signature 338 356 2.8E-28 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 JV59_19520 5202a86944a3cef12ba9e0a2e7fcfd9e 393 PRINTS PR00799 Aspartate aminotransferase signature 203 215 2.8E-28 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 JV59_19520 5202a86944a3cef12ba9e0a2e7fcfd9e 393 PRINTS PR00799 Aspartate aminotransferase signature 172 191 2.8E-28 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 JV59_31080 f85f74021c2827d38afa06cde8ee284d 219 Pfam PF11205 Protein of unknown function (DUF2987) 23 166 2.4E-53 T 14-10-2018 IPR021370 Protein of unknown function DUF2987 JV59_21275 b4036ef7f2cbea01facaae05abad3d3c 197 SUPERFAMILY SSF51182 26 196 1.75E-38 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JV59_21275 b4036ef7f2cbea01facaae05abad3d3c 197 Pfam PF05995 Cysteine dioxygenase type I 37 177 3.9E-26 T 14-10-2018 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|Reactome: R-HSA-1614558 JV59_21275 b4036ef7f2cbea01facaae05abad3d3c 197 Gene3D G3DSA:2.60.120.10 17 182 5.2E-39 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_29930 713a5d09bc7839646fca2e7ba1928f81 119 Gene3D G3DSA:3.10.180.10 1 114 1.7E-15 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_29930 713a5d09bc7839646fca2e7ba1928f81 119 SUPERFAMILY SSF54593 2 116 1.11E-14 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_35010 b2b761b6f5818a850016d7cac31c2eec 199 Gene3D G3DSA:3.10.180.10 7 199 3.5E-65 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_35010 b2b761b6f5818a850016d7cac31c2eec 199 SUPERFAMILY SSF54593 6 197 5.44E-65 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_35010 b2b761b6f5818a850016d7cac31c2eec 199 Pfam PF06185 YecM protein 13 196 1.5E-68 T 14-10-2018 IPR010393 Protein of unknown function DUF991 JV59_30360 3a2e6625d81d71b81029897b911ac5a0 258 SUPERFAMILY SSF56281 12 226 2.03E-34 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JV59_30360 3a2e6625d81d71b81029897b911ac5a0 258 Gene3D G3DSA:3.60.15.10 2 229 1.4E-32 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JV59_30360 3a2e6625d81d71b81029897b911ac5a0 258 Pfam PF00753 Metallo-beta-lactamase superfamily 13 209 5.1E-13 T 14-10-2018 IPR001279 Metallo-beta-lactamase JV59_30360 3a2e6625d81d71b81029897b911ac5a0 258 SMART SM00849 10 209 9.7E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase JV59_37845 340a68eb45ad9fc27998e5802a6d3220 130 Pfam PF00410 Ribosomal protein S8 5 129 3.7E-47 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37845 340a68eb45ad9fc27998e5802a6d3220 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37845 340a68eb45ad9fc27998e5802a6d3220 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.131 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37845 340a68eb45ad9fc27998e5802a6d3220 130 SUPERFAMILY SSF56047 2 129 1.96E-44 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37845 340a68eb45ad9fc27998e5802a6d3220 130 Gene3D G3DSA:3.30.1370.30 2 72 2.0E-26 T 14-10-2018 JV59_37845 340a68eb45ad9fc27998e5802a6d3220 130 Gene3D G3DSA:3.30.1490.10 73 130 5.9E-25 T 14-10-2018 JV59_30205 d2d5fc776a372d175f5e9c13b133b71d 477 Pfam PF11066 Protein of unknown function (DUF2867) 333 465 7.6E-12 T 14-10-2018 IPR021295 Protein of unknown function DUF2867 JV59_30205 d2d5fc776a372d175f5e9c13b133b71d 477 SUPERFAMILY SSF51735 1 293 6.45E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_30205 d2d5fc776a372d175f5e9c13b133b71d 477 Gene3D G3DSA:3.40.50.720 2 268 2.2E-33 T 14-10-2018 JV59_30205 d2d5fc776a372d175f5e9c13b133b71d 477 Pfam PF13460 NAD(P)H-binding 8 146 2.3E-13 T 14-10-2018 IPR016040 NAD(P)-binding domain JV59_26255 51a63bdefb2b50aacab7a4a455b315e9 234 SMART SM00382 24 206 1.0E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_26255 51a63bdefb2b50aacab7a4a455b315e9 234 Pfam PF00005 ABC transporter 18 157 3.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_26255 51a63bdefb2b50aacab7a4a455b315e9 234 SUPERFAMILY SSF52540 1 231 5.2E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_26255 51a63bdefb2b50aacab7a4a455b315e9 234 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_26255 51a63bdefb2b50aacab7a4a455b315e9 234 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 211 1.9E-102 T 14-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 JV59_26255 51a63bdefb2b50aacab7a4a455b315e9 234 Gene3D G3DSA:3.40.50.300 1 232 4.2E-62 T 14-10-2018 JV59_17100 7fdd6a0a1c33c7d844cc86a83e13cb81 457 SUPERFAMILY SSF55073 299 451 6.04E-42 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_17100 7fdd6a0a1c33c7d844cc86a83e13cb81 457 Pfam PF00990 Diguanylate cyclase, GGDEF domain 295 452 7.2E-40 T 14-10-2018 IPR000160 GGDEF domain JV59_17100 7fdd6a0a1c33c7d844cc86a83e13cb81 457 Gene3D G3DSA:3.30.70.270 289 456 2.4E-48 T 14-10-2018 JV59_17100 7fdd6a0a1c33c7d844cc86a83e13cb81 457 SMART SM00267 283 453 1.7E-36 T 14-10-2018 IPR000160 GGDEF domain JV59_17100 7fdd6a0a1c33c7d844cc86a83e13cb81 457 Pfam PF03924 CHASE domain 109 196 4.8E-14 T 14-10-2018 IPR006189 CHASE domain JV59_17100 7fdd6a0a1c33c7d844cc86a83e13cb81 457 SMART SM01079 47 223 5.9E-32 T 14-10-2018 IPR006189 CHASE domain JV59_17100 7fdd6a0a1c33c7d844cc86a83e13cb81 457 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 292 452 4.5E-42 T 14-10-2018 IPR000160 GGDEF domain JV59_17865 d0fa87efb7ac7bc3c1019f53f728f778 82 SUPERFAMILY SSF141868 37 78 1.83E-9 T 14-10-2018 IPR035919 EAL domain superfamily JV59_17865 d0fa87efb7ac7bc3c1019f53f728f778 82 Gene3D G3DSA:3.20.20.450 25 82 3.1E-6 T 14-10-2018 IPR035919 EAL domain superfamily JV59_37445 a88ecaef966e0caeb04175f92f3fa46a 163 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 2.3E-54 T 14-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 JV59_37445 a88ecaef966e0caeb04175f92f3fa46a 163 Pfam PF02470 MlaD protein 39 118 4.9E-18 T 14-10-2018 IPR003399 Mce/MlaD JV59_19170 b16c47444603ee2df3b90055cb222eb3 162 Pfam PF04993 TfoX N-terminal domain 1 45 6.5E-6 T 14-10-2018 IPR007076 TfoX, N-terminal JV59_19170 b16c47444603ee2df3b90055cb222eb3 162 Pfam PF04994 TfoX C-terminal domain 80 157 3.5E-19 T 14-10-2018 IPR007077 TfoX, C-terminal JV59_19170 b16c47444603ee2df3b90055cb222eb3 162 Gene3D G3DSA:3.30.1460.30 1 68 1.1E-9 T 14-10-2018 JV59_19170 b16c47444603ee2df3b90055cb222eb3 162 Gene3D G3DSA:1.10.150.20 79 162 8.6E-14 T 14-10-2018 JV59_19170 b16c47444603ee2df3b90055cb222eb3 162 SUPERFAMILY SSF159894 1 45 2.56E-5 T 14-10-2018 JV59_19455 fd7e412b142da88cf9f4b5f4a3792566 106 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 1 92 9.0E-41 T 14-10-2018 IPR007458 Protein of unknown function DUF496 JV59_19455 fd7e412b142da88cf9f4b5f4a3792566 106 PIRSF PIRSF028773 1 104 1.1E-46 T 14-10-2018 IPR007458 Protein of unknown function DUF496 JV59_19455 fd7e412b142da88cf9f4b5f4a3792566 106 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 1 95 23.973 T 14-10-2018 IPR007458 Protein of unknown function DUF496 JV59_19455 fd7e412b142da88cf9f4b5f4a3792566 106 Pfam PF04363 Protein of unknown function (DUF496) 1 92 4.0E-42 T 14-10-2018 IPR007458 Protein of unknown function DUF496 JV59_35875 d6b90263d288bedbbb25948bf682265a 512 Pfam PF01235 Sodium:alanine symporter family 51 471 3.4E-149 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_35875 d6b90263d288bedbbb25948bf682265a 512 PRINTS PR00175 Sodium/alanine symporter signature 363 385 2.7E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_35875 d6b90263d288bedbbb25948bf682265a 512 PRINTS PR00175 Sodium/alanine symporter signature 426 446 2.7E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_35875 d6b90263d288bedbbb25948bf682265a 512 PRINTS PR00175 Sodium/alanine symporter signature 217 236 2.7E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_35875 d6b90263d288bedbbb25948bf682265a 512 PRINTS PR00175 Sodium/alanine symporter signature 189 207 2.7E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_35875 d6b90263d288bedbbb25948bf682265a 512 PRINTS PR00175 Sodium/alanine symporter signature 86 108 2.7E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_35875 d6b90263d288bedbbb25948bf682265a 512 PRINTS PR00175 Sodium/alanine symporter signature 304 322 2.7E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_35875 d6b90263d288bedbbb25948bf682265a 512 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 460 3.7E-133 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_35875 d6b90263d288bedbbb25948bf682265a 512 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JV59_19590 95f7830ccec87b09d8354897f4a1ffa1 230 Gene3D G3DSA:3.40.50.1860 4 223 1.5E-86 T 14-10-2018 JV59_19590 95f7830ccec87b09d8354897f4a1ffa1 230 SUPERFAMILY SSF53681 118 228 7.52E-31 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JV59_19590 95f7830ccec87b09d8354897f4a1ffa1 230 SUPERFAMILY SSF53681 1 116 8.83E-37 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JV59_19590 95f7830ccec87b09d8354897f4a1ffa1 230 Gene3D G3DSA:3.40.50.1860 104 215 1.5E-86 T 14-10-2018 JV59_19590 95f7830ccec87b09d8354897f4a1ffa1 230 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 229 9.3E-72 T 14-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 JV59_19590 95f7830ccec87b09d8354897f4a1ffa1 230 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 1.0E-61 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JV59_17715 e69a3e0d8b65cf64ec9dbd940a82af95 270 Pfam PF01381 Helix-turn-helix 10 69 1.2E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_17715 e69a3e0d8b65cf64ec9dbd940a82af95 270 Gene3D G3DSA:1.10.260.40 2 109 6.6E-16 T 14-10-2018 JV59_17715 e69a3e0d8b65cf64ec9dbd940a82af95 270 SUPERFAMILY SSF47413 2 70 1.1E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_17715 e69a3e0d8b65cf64ec9dbd940a82af95 270 SMART SM00530 9 72 3.5E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_18585 85d22c7efd9b93798a7e3d83c73af466 322 Gene3D G3DSA:1.10.3720.10 105 308 1.3E-22 T 14-10-2018 IPR035906 MetI-like superfamily JV59_18585 85d22c7efd9b93798a7e3d83c73af466 322 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 130 300 6.4E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_18585 85d22c7efd9b93798a7e3d83c73af466 322 SUPERFAMILY SSF161098 106 303 2.88E-25 T 14-10-2018 IPR035906 MetI-like superfamily JV59_23160 eec17a51b1399b29da5cd7957c94f7ed 119 Pfam PF00072 Response regulator receiver domain 4 115 6.1E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_23160 eec17a51b1399b29da5cd7957c94f7ed 119 SUPERFAMILY SSF52172 1 119 1.71E-38 T 14-10-2018 IPR011006 CheY-like superfamily JV59_23160 eec17a51b1399b29da5cd7957c94f7ed 119 SMART SM00448 2 115 1.3E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_23160 eec17a51b1399b29da5cd7957c94f7ed 119 Gene3D G3DSA:3.40.50.12740 2 119 4.1E-39 T 14-10-2018 JV59_25805 2ced7814d0d1a6124cfbeb7843a75049 225 Gene3D G3DSA:3.60.60.10 30 211 3.1E-5 T 14-10-2018 JV59_25650 cb1cd450843a353a21bb03baa64199a0 363 Gene3D G3DSA:2.40.160.180 64 361 7.0E-11 T 14-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily JV59_34695 8fbfc17f4e6a0d81ac529dfae2dadbf9 93 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 5.1E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JV59_34695 8fbfc17f4e6a0d81ac529dfae2dadbf9 93 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 5.1E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JV59_34695 8fbfc17f4e6a0d81ac529dfae2dadbf9 93 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 5.1E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JV59_34695 8fbfc17f4e6a0d81ac529dfae2dadbf9 93 SMART SM00411 1 91 1.4E-43 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JV59_34695 8fbfc17f4e6a0d81ac529dfae2dadbf9 93 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 93 30.669 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 JV59_34695 8fbfc17f4e6a0d81ac529dfae2dadbf9 93 SUPERFAMILY SSF47729 1 91 1.62E-30 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 JV59_34695 8fbfc17f4e6a0d81ac529dfae2dadbf9 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 JV59_34695 8fbfc17f4e6a0d81ac529dfae2dadbf9 93 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 5.0E-49 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 JV59_34695 8fbfc17f4e6a0d81ac529dfae2dadbf9 93 Pfam PF00216 Bacterial DNA-binding protein 1 91 2.9E-31 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JV59_34695 8fbfc17f4e6a0d81ac529dfae2dadbf9 93 Gene3D G3DSA:4.10.520.10 1 93 2.6E-36 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 JV59_32685 c31b3dd369bfcbac264cf94525650f1d 107 SUPERFAMILY SSF102705 2 102 1.69E-10 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily JV59_32685 c31b3dd369bfcbac264cf94525650f1d 107 Gene3D G3DSA:3.30.70.120 1 105 6.6E-19 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JV59_29020 b254924d78ded6a9e8ff8ef576f58cb1 77 Pfam PF06667 Phage shock protein B 4 74 1.5E-33 T 14-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 JV59_29020 b254924d78ded6a9e8ff8ef576f58cb1 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 75 2.0E-36 T 14-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 JV59_27340 8fddd21a2e2e6670348d1c21fd395dce 104 SUPERFAMILY SSF101498 4 97 1.96E-20 T 14-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily JV59_27340 8fddd21a2e2e6670348d1c21fd395dce 104 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 4 98 4.3E-25 T 14-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 JV59_27340 8fddd21a2e2e6670348d1c21fd395dce 104 Pfam PF04316 Anti-sigma-28 factor, FlgM 41 94 5.6E-19 T 14-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal JV59_16095 de8b099cb54728274f69427eb99c044b 186 SUPERFAMILY SSF51161 7 136 1.18E-31 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JV59_16095 de8b099cb54728274f69427eb99c044b 186 Gene3D G3DSA:2.160.10.10 1 183 9.5E-48 T 14-10-2018 JV59_16095 de8b099cb54728274f69427eb99c044b 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 44 1.1E-6 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_16095 de8b099cb54728274f69427eb99c044b 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 79 112 1.1E-5 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_38640 3bc4daf130c26d1f020dac7749ccf67e 164 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 9 161 4.4E-60 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JV59_38640 3bc4daf130c26d1f020dac7749ccf67e 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 1.5E-48 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JV59_38640 3bc4daf130c26d1f020dac7749ccf67e 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 1.5E-48 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JV59_38640 3bc4daf130c26d1f020dac7749ccf67e 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 54 78 1.5E-48 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JV59_38640 3bc4daf130c26d1f020dac7749ccf67e 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 25 46 1.5E-48 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JV59_38640 3bc4daf130c26d1f020dac7749ccf67e 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 7 25 1.5E-48 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JV59_38640 3bc4daf130c26d1f020dac7749ccf67e 164 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 8 68 4.9E-20 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JV59_38640 3bc4daf130c26d1f020dac7749ccf67e 164 Pfam PF01467 Cytidylyltransferase-like 10 138 5.9E-21 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JV59_38640 3bc4daf130c26d1f020dac7749ccf67e 164 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 7 163 35.839 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JV59_38640 3bc4daf130c26d1f020dac7749ccf67e 164 Gene3D G3DSA:3.40.50.620 1 164 8.8E-56 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_38640 3bc4daf130c26d1f020dac7749ccf67e 164 SUPERFAMILY SSF52374 8 161 1.96E-45 T 14-10-2018 JV59_32725 91f663c64fd6073f7968f7975f9fc699 137 Gene3D G3DSA:3.40.630.30 1 136 2.5E-21 T 14-10-2018 JV59_32725 91f663c64fd6073f7968f7975f9fc699 137 SUPERFAMILY SSF55729 2 127 7.09E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_32725 91f663c64fd6073f7968f7975f9fc699 137 Pfam PF13673 Acetyltransferase (GNAT) domain 45 125 5.7E-13 T 14-10-2018 IPR000182 GNAT domain JV59_17565 8a3edf68a20f0c52c92cee6d312b4040 148 SMART SM00344 1 110 3.2E-16 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 JV59_17565 8a3edf68a20f0c52c92cee6d312b4040 148 Pfam PF01037 Lrp/AsnC ligand binding domain 76 139 2.5E-13 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JV59_17565 8a3edf68a20f0c52c92cee6d312b4040 148 SUPERFAMILY SSF46785 1 55 2.52E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_17565 8a3edf68a20f0c52c92cee6d312b4040 148 SUPERFAMILY SSF54909 69 145 1.61E-14 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_17565 8a3edf68a20f0c52c92cee6d312b4040 148 Gene3D G3DSA:3.30.70.920 59 147 3.2E-14 T 14-10-2018 JV59_17565 8a3edf68a20f0c52c92cee6d312b4040 148 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.0E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_17565 8a3edf68a20f0c52c92cee6d312b4040 148 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.0E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_17565 8a3edf68a20f0c52c92cee6d312b4040 148 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.0E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_17565 8a3edf68a20f0c52c92cee6d312b4040 148 Gene3D G3DSA:1.10.10.10 1 52 6.3E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_17565 8a3edf68a20f0c52c92cee6d312b4040 148 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 1.4E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_01970 8022827d1578656be9842226658c5dd0 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 1.9E-41 T 14-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 JV59_01970 8022827d1578656be9842226658c5dd0 421 PIRSF PIRSF038885 1 421 4.6E-154 T 14-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 JV59_01970 8022827d1578656be9842226658c5dd0 421 SUPERFAMILY SSF81648 297 412 9.37E-34 T 14-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 JV59_01970 8022827d1578656be9842226658c5dd0 421 SUPERFAMILY SSF81342 6 296 7.22E-93 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 JV59_01970 8022827d1578656be9842226658c5dd0 421 Gene3D G3DSA:1.20.810.10 1 421 1.4E-150 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 JV59_01970 8022827d1578656be9842226658c5dd0 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 5.7E-66 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 JV59_31660 e8effbaf1b401350ee7731e628ea136c 183 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 178 35.773 T 14-10-2018 IPR009809 Cell division protein ZapC JV59_31660 e8effbaf1b401350ee7731e628ea136c 183 PIRSF PIRSF010252 1 179 1.5E-65 T 14-10-2018 IPR009809 Cell division protein ZapC JV59_31660 e8effbaf1b401350ee7731e628ea136c 183 Pfam PF07126 Cell-division protein ZapC 1 169 1.5E-62 T 14-10-2018 IPR009809 Cell division protein ZapC JV59_37440 4b9d973ca431bb8912798fa513208cc0 213 PIRSF PIRSF004649 1 212 1.6E-59 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC JV59_37440 4b9d973ca431bb8912798fa513208cc0 213 Gene3D G3DSA:3.10.450.710 25 204 3.2E-39 T 14-10-2018 JV59_37440 4b9d973ca431bb8912798fa513208cc0 213 Pfam PF05494 MlaC protein 33 199 4.6E-47 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC JV59_35215 ef47d26395efbb04af81c9d874941e27 266 PRINTS PR01003 Flagellar assembly protein FliH signature 89 111 7.3E-7 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 JV59_35215 ef47d26395efbb04af81c9d874941e27 266 PRINTS PR01003 Flagellar assembly protein FliH signature 112 130 7.3E-7 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 JV59_35215 ef47d26395efbb04af81c9d874941e27 266 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 7.3E-7 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 JV59_35215 ef47d26395efbb04af81c9d874941e27 266 Pfam PF02108 Flagellar assembly protein FliH 125 251 5.6E-33 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE JV59_24645 1c5821af1d330a0eff5b580185d9fffe 204 Pfam PF13395 HNH endonuclease 51 102 1.3E-4 T 14-10-2018 IPR003615 HNH nuclease JV59_24645 1c5821af1d330a0eff5b580185d9fffe 204 Gene3D G3DSA:3.30.40.60 7 127 3.0E-7 T 14-10-2018 JV59_17450 e498a1aff5e01b5bf9c1a44ec7a97d1f 389 Gene3D G3DSA:3.40.50.1820 75 298 1.1E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_17450 e498a1aff5e01b5bf9c1a44ec7a97d1f 389 Pfam PF12146 Serine aminopeptidase, S33 89 204 4.3E-11 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 JV59_17450 e498a1aff5e01b5bf9c1a44ec7a97d1f 389 SUPERFAMILY SSF53474 78 290 1.52E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_29310 f755e9ade92c8f5922393595e8beff59 168 Gene3D G3DSA:1.10.260.40 1 69 1.0E-11 T 14-10-2018 JV59_29310 f755e9ade92c8f5922393595e8beff59 168 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 20 63 1.2E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_29310 f755e9ade92c8f5922393595e8beff59 168 SUPERFAMILY SSF47413 4 66 4.15E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_25730 66395b640fe93da3a4ef929e3868f09d 122 SUPERFAMILY SSF52172 1 119 1.42E-28 T 14-10-2018 IPR011006 CheY-like superfamily JV59_25730 66395b640fe93da3a4ef929e3868f09d 122 Pfam PF00072 Response regulator receiver domain 6 116 1.2E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_25730 66395b640fe93da3a4ef929e3868f09d 122 Gene3D G3DSA:3.40.50.2300 1 120 3.1E-28 T 14-10-2018 JV59_25730 66395b640fe93da3a4ef929e3868f09d 122 SMART SM00448 4 116 5.4E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_19965 7c7e9b13e72fc00e63f892c0c14da6df 540 SUPERFAMILY SSF52540 6 256 6.89E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_19965 7c7e9b13e72fc00e63f892c0c14da6df 540 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 506 536 0.0023 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JV59_19965 7c7e9b13e72fc00e63f892c0c14da6df 540 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 264 1.7E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JV59_19965 7c7e9b13e72fc00e63f892c0c14da6df 540 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_19965 7c7e9b13e72fc00e63f892c0c14da6df 540 Pfam PF00005 ABC transporter 26 185 2.3E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_19965 7c7e9b13e72fc00e63f892c0c14da6df 540 SMART SM00382 312 504 6.5E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_19965 7c7e9b13e72fc00e63f892c0c14da6df 540 SMART SM00382 35 235 1.1E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_19965 7c7e9b13e72fc00e63f892c0c14da6df 540 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_19965 7c7e9b13e72fc00e63f892c0c14da6df 540 SUPERFAMILY SSF52540 294 525 1.3E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_19965 7c7e9b13e72fc00e63f892c0c14da6df 540 Pfam PF00005 ABC transporter 304 455 6.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_19965 7c7e9b13e72fc00e63f892c0c14da6df 540 Gene3D G3DSA:3.40.50.300 4 279 2.1E-82 T 14-10-2018 JV59_19965 7c7e9b13e72fc00e63f892c0c14da6df 540 Gene3D G3DSA:3.40.50.300 280 539 3.9E-85 T 14-10-2018 JV59_19515 5edb27392fc1e70b8ffc60c08813164a 218 SUPERFAMILY SSF50630 83 214 9.85E-42 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily JV59_19515 5edb27392fc1e70b8ffc60c08813164a 218 Pfam PF05618 Putative ATP-dependant zinc protease 83 217 7.4E-45 T 14-10-2018 JV59_19515 5edb27392fc1e70b8ffc60c08813164a 218 Gene3D G3DSA:2.40.70.10 80 207 1.2E-41 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily JV59_21695 eea8cac4bdb905818730df17fef7465b 259 SUPERFAMILY SSF141371 149 247 5.89E-13 T 14-10-2018 JV59_21695 eea8cac4bdb905818730df17fef7465b 259 Pfam PF07238 PilZ domain 146 244 4.2E-10 T 14-10-2018 IPR009875 PilZ domain GO:0035438 JV59_21695 eea8cac4bdb905818730df17fef7465b 259 Gene3D G3DSA:2.30.110.10 33 146 3.7E-29 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JV59_21695 eea8cac4bdb905818730df17fef7465b 259 SUPERFAMILY SSF141371 39 132 1.84E-12 T 14-10-2018 JV59_21695 eea8cac4bdb905818730df17fef7465b 259 Gene3D G3DSA:2.40.10.220 147 257 2.7E-25 T 14-10-2018 JV59_21695 eea8cac4bdb905818730df17fef7465b 259 Pfam PF12945 Flagellar protein YcgR 54 126 5.7E-5 T 14-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal JV59_27120 a930b68fcbbbf5d853e3990d10ed650b 156 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 142 5.8E-37 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 JV59_27120 a930b68fcbbbf5d853e3990d10ed650b 156 Pfam PF02130 Uncharacterized protein family UPF0054 27 140 1.0E-37 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 JV59_27120 a930b68fcbbbf5d853e3990d10ed650b 156 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.234 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 JV59_27120 a930b68fcbbbf5d853e3990d10ed650b 156 Gene3D G3DSA:3.40.390.30 1 154 1.2E-57 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 JV59_27120 a930b68fcbbbf5d853e3990d10ed650b 156 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site JV59_27120 a930b68fcbbbf5d853e3990d10ed650b 156 SUPERFAMILY SSF55486 5 150 1.1E-47 T 14-10-2018 JV59_30585 3e9daac795416428e00366c2fcb9e182 240 PRINTS PR01399 Enterobactin synthetase component D signature 61 81 1.7E-12 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 JV59_30585 3e9daac795416428e00366c2fcb9e182 240 PRINTS PR01399 Enterobactin synthetase component D signature 169 185 1.7E-12 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 JV59_30585 3e9daac795416428e00366c2fcb9e182 240 PRINTS PR01399 Enterobactin synthetase component D signature 90 108 1.7E-12 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 JV59_30585 3e9daac795416428e00366c2fcb9e182 240 SUPERFAMILY SSF56214 125 210 7.67E-11 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 JV59_30585 3e9daac795416428e00366c2fcb9e182 240 Gene3D G3DSA:3.90.470.20 45 144 1.8E-5 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 JV59_30585 3e9daac795416428e00366c2fcb9e182 240 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 127 212 4.7E-11 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 JV59_19910 938942f8994055662b33de5b08638c44 430 Gene3D G3DSA:3.30.830.10 32 232 7.5E-20 T 14-10-2018 JV59_19910 938942f8994055662b33de5b08638c44 430 Pfam PF05193 Peptidase M16 inactive domain 183 356 8.7E-10 T 14-10-2018 IPR007863 Peptidase M16, C-terminal JV59_19910 938942f8994055662b33de5b08638c44 430 SUPERFAMILY SSF63411 41 232 4.82E-19 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JV59_36120 4cbdbbd25b93045273ba1b8c2c14214f 110 Pfam PF08921 Domain of unknown function (DUF1904) 1 109 3.0E-39 T 14-10-2018 IPR015017 Protein of unknown function DUF1904 JV59_36120 4cbdbbd25b93045273ba1b8c2c14214f 110 SUPERFAMILY SSF55331 1 110 7.94E-37 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily JV59_36120 4cbdbbd25b93045273ba1b8c2c14214f 110 Gene3D G3DSA:3.30.429.10 1 110 1.8E-44 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily JV59_28815 285014b0bc1419a830183ae437216072 343 Gene3D G3DSA:2.40.160.10 83 343 9.0E-17 T 14-10-2018 IPR023614 Porin domain superfamily JV59_28815 285014b0bc1419a830183ae437216072 343 Pfam PF13609 Gram-negative porin 7 321 3.1E-19 T 14-10-2018 JV59_28815 285014b0bc1419a830183ae437216072 343 SUPERFAMILY SSF56935 87 343 4.79E-24 T 14-10-2018 JV59_31785 573f367b1ae8a4a41ad87d37b4d63a35 109 Pfam PF04358 DsrC like protein 3 109 5.0E-44 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE JV59_31785 573f367b1ae8a4a41ad87d37b4d63a35 109 Gene3D G3DSA:3.30.1420.10 2 38 4.5E-13 T 14-10-2018 JV59_31785 573f367b1ae8a4a41ad87d37b4d63a35 109 PIRSF PIRSF006223 2 109 3.9E-40 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE JV59_31785 573f367b1ae8a4a41ad87d37b4d63a35 109 SUPERFAMILY SSF69721 2 109 5.36E-41 T 14-10-2018 IPR025526 DsrC-like domain superfamily JV59_31785 573f367b1ae8a4a41ad87d37b4d63a35 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 3 109 3.3E-49 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE JV59_31785 573f367b1ae8a4a41ad87d37b4d63a35 109 Gene3D G3DSA:1.10.10.370 39 109 1.8E-30 T 14-10-2018 JV59_16465 9439ccff4f4e8b2bae9b728000af6c34 372 Gene3D G3DSA:3.40.50.2000 3 369 4.6E-152 T 14-10-2018 JV59_16465 9439ccff4f4e8b2bae9b728000af6c34 372 Gene3D G3DSA:3.40.50.2000 188 357 4.6E-152 T 14-10-2018 JV59_16465 9439ccff4f4e8b2bae9b728000af6c34 372 SUPERFAMILY SSF53756 2 370 1.06E-132 T 14-10-2018 JV59_16465 9439ccff4f4e8b2bae9b728000af6c34 372 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 3 370 1.4E-156 T 14-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 JV59_16465 9439ccff4f4e8b2bae9b728000af6c34 372 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 23 370 4.5E-119 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 JV59_28405 4adc802c5a963a0ef9c4f871ebdc1947 263 Pfam PF08241 Methyltransferase domain 52 148 4.1E-12 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 JV59_28405 4adc802c5a963a0ef9c4f871ebdc1947 263 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 3 259 39.574 T 14-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 JV59_28405 4adc802c5a963a0ef9c4f871ebdc1947 263 SUPERFAMILY SSF53335 6 241 1.35E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_28405 4adc802c5a963a0ef9c4f871ebdc1947 263 Gene3D G3DSA:3.40.50.150 9 263 2.3E-57 T 14-10-2018 JV59_33515 cf2134b69662d5eaec89d88f1d021697 243 Gene3D G3DSA:3.40.190.10 30 234 3.5E-16 T 14-10-2018 JV59_33515 cf2134b69662d5eaec89d88f1d021697 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 31 240 4.1E-13 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_33515 cf2134b69662d5eaec89d88f1d021697 243 Gene3D G3DSA:3.40.190.10 102 205 3.5E-16 T 14-10-2018 JV59_33515 cf2134b69662d5eaec89d88f1d021697 243 SUPERFAMILY SSF53850 21 242 1.25E-27 T 14-10-2018 JV59_19840 16393422ec0f52db5b476b5ed0d575b1 785 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 102 784 1.8E-292 T 14-10-2018 IPR010706 Fatty acid cis-trans isomerase JV59_02160 16f21ff8a859c9c02bae10c065588dd5 420 Pfam PF07670 Nucleoside recognition 95 191 5.2E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 JV59_02160 16f21ff8a859c9c02bae10c065588dd5 420 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 417 3.2E-151 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 JV59_02160 16f21ff8a859c9c02bae10c065588dd5 420 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 6.0E-26 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 JV59_02160 16f21ff8a859c9c02bae10c065588dd5 420 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 197 417 2.6E-72 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 JV59_17200 efe20e3f13b10e34b549e807180c0225 175 Gene3D G3DSA:3.40.220.10 1 174 5.7E-62 T 14-10-2018 JV59_17200 efe20e3f13b10e34b549e807180c0225 175 SMART SM00506 3 136 4.7E-48 T 14-10-2018 IPR002589 Macro domain JV59_17200 efe20e3f13b10e34b549e807180c0225 175 SUPERFAMILY SSF52949 2 166 3.03E-53 T 14-10-2018 JV59_17200 efe20e3f13b10e34b549e807180c0225 175 Pfam PF01661 Macro domain 20 136 8.0E-39 T 14-10-2018 IPR002589 Macro domain JV59_36350 74b4e0e852009df3e7cfddb01d02e0d6 487 Pfam PF13629 Pilus formation protein N terminal region 26 95 8.8E-20 T 14-10-2018 IPR032789 Pilus formation protein, N-terminal JV59_36350 74b4e0e852009df3e7cfddb01d02e0d6 487 PRINTS PR00811 Bacterial general secretion pathway protein D signature 388 406 1.9E-10 T 14-10-2018 IPR001775 GspD/PilQ family JV59_36350 74b4e0e852009df3e7cfddb01d02e0d6 487 PRINTS PR00811 Bacterial general secretion pathway protein D signature 178 188 1.9E-10 T 14-10-2018 IPR001775 GspD/PilQ family JV59_36350 74b4e0e852009df3e7cfddb01d02e0d6 487 PRINTS PR00811 Bacterial general secretion pathway protein D signature 411 425 1.9E-10 T 14-10-2018 IPR001775 GspD/PilQ family JV59_36350 74b4e0e852009df3e7cfddb01d02e0d6 487 PRINTS PR00811 Bacterial general secretion pathway protein D signature 254 278 1.9E-10 T 14-10-2018 IPR001775 GspD/PilQ family JV59_36350 74b4e0e852009df3e7cfddb01d02e0d6 487 Pfam PF00263 Bacterial type II and III secretion system protein 259 422 3.4E-39 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 JV59_33800 0bbde73a1397943873d3bf4706eacf35 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 40.222 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 JV59_33800 0bbde73a1397943873d3bf4706eacf35 423 Pfam PF04285 Protein of unknown function (DUF444) 3 421 3.9E-187 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 JV59_24290 b8fcbbc22ed78be414a14f675192df27 112 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 12 105 5.5E-23 T 14-10-2018 IPR009241 Toxin HigB-like JV59_29950 cc3125499a4c85a61505585e79674162 400 Gene3D G3DSA:2.40.170.10 26 400 7.2E-114 T 14-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 JV59_29950 cc3125499a4c85a61505585e79674162 400 SUPERFAMILY SSF56935 26 400 4.27E-107 T 14-10-2018 JV59_29950 cc3125499a4c85a61505585e79674162 400 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 33 387 2.0E-80 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 JV59_29950 cc3125499a4c85a61505585e79674162 400 Pfam PF02264 LamB porin 28 400 3.0E-105 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 JV59_31940 28d759ffedb9cdb4b0fb941d6441d825 849 SUPERFAMILY SSF103473 456 843 3.14E-58 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_31940 28d759ffedb9cdb4b0fb941d6441d825 849 ProSitePatterns PS00216 Sugar transport proteins signature 1. 510 527 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JV59_31940 28d759ffedb9cdb4b0fb941d6441d825 849 Pfam PF07690 Major Facilitator Superfamily 461 774 3.2E-40 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_31940 28d759ffedb9cdb4b0fb941d6441d825 849 Gene3D G3DSA:1.20.1250.20 649 844 8.5E-22 T 14-10-2018 JV59_31940 28d759ffedb9cdb4b0fb941d6441d825 849 Gene3D G3DSA:1.20.1250.20 455 632 9.9E-28 T 14-10-2018 JV59_18565 4f99fc82d8153698285cf3730c6fd41d 293 Gene3D G3DSA:3.30.950.10 159 288 3.6E-35 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 JV59_18565 4f99fc82d8153698285cf3730c6fd41d 293 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 44 253 1.4E-44 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 JV59_18565 4f99fc82d8153698285cf3730c6fd41d 293 SUPERFAMILY SSF53790 41 282 1.83E-69 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 JV59_18565 4f99fc82d8153698285cf3730c6fd41d 293 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 43 277 4.1E-85 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 JV59_18565 4f99fc82d8153698285cf3730c6fd41d 293 Gene3D G3DSA:3.40.1010.10 41 158 1.7E-44 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 JV59_02050 2778eafda29c8854b10fd84e9b27c4e5 399 Pfam PF01098 Cell cycle protein 26 381 7.2E-114 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JV59_02050 2778eafda29c8854b10fd84e9b27c4e5 399 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 24 380 3.6E-129 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JV59_02050 2778eafda29c8854b10fd84e9b27c4e5 399 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 22 389 41.194 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JV59_02050 2778eafda29c8854b10fd84e9b27c4e5 399 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JV59_31925 de3edfe457ca8ff318a10091f3e27540 583 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 581 1.4E-107 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like JV59_31925 de3edfe457ca8ff318a10091f3e27540 583 Pfam PF05947 Type VI secretion system, TssF 7 580 8.2E-118 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like JV59_37685 f67c2d54f1c868f966135b7e1badd9df 84 Pfam PF11112 Pyocin activator protein PrtN 3 75 1.9E-24 T 14-10-2018 IPR020518 Transcription regulator PrtN GO:0006355 JV59_39750 b7afb8dba61933351cfb09252a3fbd1b 325 Gene3D G3DSA:1.10.3720.10 84 314 1.1E-17 T 14-10-2018 IPR035906 MetI-like superfamily JV59_39750 b7afb8dba61933351cfb09252a3fbd1b 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 3.3E-38 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_39750 b7afb8dba61933351cfb09252a3fbd1b 325 SUPERFAMILY SSF161098 90 302 6.54E-16 T 14-10-2018 IPR035906 MetI-like superfamily JV59_00750 843c753a4d97efca0eb2e2015f9132d9 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 10 154 1.2E-36 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 JV59_00750 843c753a4d97efca0eb2e2015f9132d9 162 Pfam PF04093 rod shape-determining protein MreD 6 154 2.2E-39 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 JV59_00750 843c753a4d97efca0eb2e2015f9132d9 162 PIRSF PIRSF018472 1 162 1.3E-42 T 14-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type JV59_16175 633c52080e120e2bb9de7ae15d27148e 176 SUPERFAMILY SSF53597 4 164 5.24E-33 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 JV59_16175 633c52080e120e2bb9de7ae15d27148e 176 Gene3D G3DSA:3.40.430.10 2 175 4.5E-53 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 JV59_16175 633c52080e120e2bb9de7ae15d27148e 176 Pfam PF01872 RibD C-terminal domain 4 163 8.8E-19 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 JV59_25795 8c34e4ea9463bfc58cc4f1e055ddcad5 792 SUPERFAMILY SSF50370 474 555 2.06E-7 T 14-10-2018 IPR035992 Ricin B-like lectins JV59_25795 8c34e4ea9463bfc58cc4f1e055ddcad5 792 SUPERFAMILY SSF50370 664 789 4.06E-8 T 14-10-2018 IPR035992 Ricin B-like lectins JV59_25795 8c34e4ea9463bfc58cc4f1e055ddcad5 792 Gene3D G3DSA:2.80.10.50 651 790 7.1E-7 T 14-10-2018 JV59_25795 8c34e4ea9463bfc58cc4f1e055ddcad5 792 SUPERFAMILY SSF50370 406 514 1.44E-5 T 14-10-2018 IPR035992 Ricin B-like lectins JV59_25795 8c34e4ea9463bfc58cc4f1e055ddcad5 792 Gene3D G3DSA:2.80.10.50 464 568 5.4E-11 T 14-10-2018 JV59_40035 b0786c91b0a9dd32c259d9d6d5a6dabe 329 Pfam PF12146 Serine aminopeptidase, S33 55 312 3.6E-57 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 JV59_40035 b0786c91b0a9dd32c259d9d6d5a6dabe 329 Gene3D G3DSA:3.40.50.1820 25 329 5.7E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_40035 b0786c91b0a9dd32c259d9d6d5a6dabe 329 SUPERFAMILY SSF53474 35 326 1.13E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_37705 02c521059f0776d57f096f558959b19f 345 Pfam PF00072 Response regulator receiver domain 11 122 1.8E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_37705 02c521059f0776d57f096f558959b19f 345 SMART SM00448 9 122 2.5E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_37705 02c521059f0776d57f096f558959b19f 345 SUPERFAMILY SSF109604 147 332 5.97E-42 T 14-10-2018 JV59_37705 02c521059f0776d57f096f558959b19f 345 Gene3D G3DSA:1.10.3210.10 142 345 4.8E-76 T 14-10-2018 JV59_37705 02c521059f0776d57f096f558959b19f 345 SMART SM00471 164 301 1.0E-9 T 14-10-2018 IPR003607 HD/PDEase domain JV59_37705 02c521059f0776d57f096f558959b19f 345 Gene3D G3DSA:3.40.50.2300 2 141 4.8E-35 T 14-10-2018 JV59_37705 02c521059f0776d57f096f558959b19f 345 SUPERFAMILY SSF52172 6 140 5.69E-37 T 14-10-2018 IPR011006 CheY-like superfamily JV59_37705 02c521059f0776d57f096f558959b19f 345 Pfam PF01966 HD domain 171 291 1.1E-17 T 14-10-2018 IPR006674 HD domain JV59_28150 eb86dbdef240e0d25e799636b72f5952 477 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 457 6.9E-162 T 14-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 JV59_28150 eb86dbdef240e0d25e799636b72f5952 477 Pfam PF03553 Na+/H+ antiporter family 161 453 1.3E-65 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 JV59_32955 4400f6fd137ba57f87ed745f888bb0b0 343 Pfam PF09375 Imelysin 47 322 8.6E-45 T 14-10-2018 IPR018976 Imelysin-like domain JV59_32955 4400f6fd137ba57f87ed745f888bb0b0 343 Gene3D G3DSA:1.20.1420.20 33 343 2.5E-74 T 14-10-2018 IPR038352 Imelysin-like domain superfamily JV59_00760 ec50a48d37c5909fdd1566a34a6a7d20 489 Gene3D G3DSA:3.40.1260.20 402 488 2.4E-7 T 14-10-2018 JV59_00760 ec50a48d37c5909fdd1566a34a6a7d20 489 Gene3D G3DSA:2.40.50.140 31 127 6.1E-32 T 14-10-2018 JV59_00760 ec50a48d37c5909fdd1566a34a6a7d20 489 Pfam PF10150 Ribonuclease E/G family 124 393 1.5E-102 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 JV59_00760 ec50a48d37c5909fdd1566a34a6a7d20 489 SUPERFAMILY SSF50249 39 128 1.35E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold JV59_00760 ec50a48d37c5909fdd1566a34a6a7d20 489 Pfam PF00575 S1 RNA binding domain 38 109 5.7E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 JV59_00760 ec50a48d37c5909fdd1566a34a6a7d20 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 1.6E-172 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 JV59_00760 ec50a48d37c5909fdd1566a34a6a7d20 489 SMART SM00316 37 122 5.8E-10 T 14-10-2018 IPR022967 RNA-binding domain, S1 JV59_21860 aa9a78e338e7e5bac35e47fc24f847b1 173 Pfam PF03358 NADPH-dependent FMN reductase 1 124 5.5E-27 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 JV59_21860 aa9a78e338e7e5bac35e47fc24f847b1 173 SUPERFAMILY SSF52218 1 173 7.65E-36 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_21860 aa9a78e338e7e5bac35e47fc24f847b1 173 Gene3D G3DSA:3.40.50.360 1 173 2.3E-31 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_22685 829d2917beec740baff59ac7b2a81642 482 Pfam PF00171 Aldehyde dehydrogenase family 14 447 2.7E-80 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JV59_22685 829d2917beec740baff59ac7b2a81642 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 222 229 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JV59_22685 829d2917beec740baff59ac7b2a81642 482 SUPERFAMILY SSF53720 6 449 1.96E-111 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JV59_22685 829d2917beec740baff59ac7b2a81642 482 PIRSF PIRSF036492 3 479 3.7E-160 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 JV59_22685 829d2917beec740baff59ac7b2a81642 482 Gene3D G3DSA:3.40.309.10 226 428 2.6E-152 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JV59_22685 829d2917beec740baff59ac7b2a81642 482 Gene3D G3DSA:3.40.605.10 24 448 2.6E-152 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JV59_29580 0ea7c7cc60c51c8979bae8fb3d1d3e45 371 Gene3D G3DSA:1.10.510.10 117 192 2.2E-5 T 14-10-2018 JV59_29580 0ea7c7cc60c51c8979bae8fb3d1d3e45 371 SUPERFAMILY SSF56112 29 197 8.06E-14 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily JV59_29580 0ea7c7cc60c51c8979bae8fb3d1d3e45 371 Gene3D G3DSA:3.30.200.20 47 116 2.2E-5 T 14-10-2018 JV59_18675 a19197ef2c3e2ac5c70d35d0510d8212 494 SMART SM00495 444 493 2.5E-9 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_18675 a19197ef2c3e2ac5c70d35d0510d8212 494 SUPERFAMILY SSF81296 27 214 3.08E-45 T 14-10-2018 IPR014756 Immunoglobulin E-set JV59_18675 a19197ef2c3e2ac5c70d35d0510d8212 494 Gene3D G3DSA:2.10.10.20 444 491 3.9E-11 T 14-10-2018 JV59_18675 a19197ef2c3e2ac5c70d35d0510d8212 494 SUPERFAMILY SSF51055 438 491 8.89E-11 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_18675 a19197ef2c3e2ac5c70d35d0510d8212 494 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 27 211 6.7E-34 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal JV59_18675 a19197ef2c3e2ac5c70d35d0510d8212 494 Gene3D G3DSA:2.70.50.50 27 216 1.2E-56 T 14-10-2018 JV59_25010 025a1d56ac0a3bf54095c8979476e92a 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 1.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_25010 025a1d56ac0a3bf54095c8979476e92a 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 1.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_25010 025a1d56ac0a3bf54095c8979476e92a 191 Gene3D G3DSA:1.10.357.10 1 188 1.8E-50 T 14-10-2018 JV59_25010 025a1d56ac0a3bf54095c8979476e92a 191 SUPERFAMILY SSF48498 83 170 3.56E-7 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JV59_25010 025a1d56ac0a3bf54095c8979476e92a 191 SUPERFAMILY SSF46689 3 75 1.23E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_25010 025a1d56ac0a3bf54095c8979476e92a 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 53 4.1E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_31225 ef0a8c2e9d7b803ba10fe8b4d133d73b 196 Pfam PF05802 Enterobacterial EspB protein 6 142 1.1E-5 T 14-10-2018 IPR008611 Protein EaeB JV59_31225 ef0a8c2e9d7b803ba10fe8b4d133d73b 196 ProDom PD454109 ESPB SECRETED PHOSPHATE TRANSFERASE PYRIDOXAL L0020 EAEB B CELL AMINOTRANSFERASE 36 120 0.001 T 14-10-2018 IPR008611 Protein EaeB JV59_24670 7c5d1c8722870519f58da3ee69d7a1de 575 SUPERFAMILY SSF52540 176 565 5.49E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_24670 7c5d1c8722870519f58da3ee69d7a1de 575 Gene3D G3DSA:3.40.50.300 127 366 5.5E-45 T 14-10-2018 JV59_24670 7c5d1c8722870519f58da3ee69d7a1de 575 Pfam PF13604 AAA domain 177 338 5.2E-15 T 14-10-2018 JV59_24670 7c5d1c8722870519f58da3ee69d7a1de 575 Gene3D G3DSA:3.40.50.300 368 565 1.3E-36 T 14-10-2018 JV59_24670 7c5d1c8722870519f58da3ee69d7a1de 575 Pfam PF13087 AAA domain 346 540 1.4E-32 T 14-10-2018 JV59_01205 a7f4df92aa0705f03dbc3ea580fb055e 330 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 32 318 7.2E-106 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 JV59_01205 a7f4df92aa0705f03dbc3ea580fb055e 330 Gene3D G3DSA:3.40.718.10 1 329 1.4E-119 T 14-10-2018 JV59_01205 a7f4df92aa0705f03dbc3ea580fb055e 330 SUPERFAMILY SSF53659 4 326 4.48E-111 T 14-10-2018 JV59_01205 a7f4df92aa0705f03dbc3ea580fb055e 330 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 328 36.169 T 14-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 JV59_01205 a7f4df92aa0705f03dbc3ea580fb055e 330 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 324 1.1E-124 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 JV59_24190 d2c178b40c2cda06b9afe3924c9d277c 261 Gene3D G3DSA:1.10.1660.10 1 72 3.4E-23 T 14-10-2018 JV59_24190 d2c178b40c2cda06b9afe3924c9d277c 261 SUPERFAMILY SSF46955 4 94 1.1E-17 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily JV59_24190 d2c178b40c2cda06b9afe3924c9d277c 261 Pfam PF13411 MerR HTH family regulatory protein 4 72 4.5E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_24190 d2c178b40c2cda06b9afe3924c9d277c 261 SMART SM00422 4 73 2.5E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_32640 52262dcd400ddea6f817a5f88cfd8468 154 Pfam PF13673 Acetyltransferase (GNAT) domain 28 139 7.9E-22 T 14-10-2018 IPR000182 GNAT domain JV59_32640 52262dcd400ddea6f817a5f88cfd8468 154 SUPERFAMILY SSF55729 1 154 7.72E-40 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_32640 52262dcd400ddea6f817a5f88cfd8468 154 Gene3D G3DSA:3.40.630.30 1 154 2.7E-47 T 14-10-2018 JV59_16075 46b46189b9ec91dd6194cca074128758 365 SUPERFAMILY SSF48452 64 155 5.46E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_16075 46b46189b9ec91dd6194cca074128758 365 Gene3D G3DSA:1.25.40.10 15 233 2.9E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_16075 46b46189b9ec91dd6194cca074128758 365 Pfam PF02698 DUF218 domain 194 311 3.3E-18 T 14-10-2018 IPR003848 Domain of unknown function DUF218 JV59_18075 f17f38ab058c8100ee311b2425084e53 338 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 334 2.0E-40 T 14-10-2018 IPR000160 GGDEF domain JV59_18075 f17f38ab058c8100ee311b2425084e53 338 SUPERFAMILY SSF55073 184 336 3.06E-41 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_18075 f17f38ab058c8100ee311b2425084e53 338 Gene3D G3DSA:3.30.70.270 164 336 3.9E-50 T 14-10-2018 JV59_18075 f17f38ab058c8100ee311b2425084e53 338 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 176 335 1.8E-42 T 14-10-2018 IPR000160 GGDEF domain JV59_18075 f17f38ab058c8100ee311b2425084e53 338 SMART SM00267 168 338 1.3E-50 T 14-10-2018 IPR000160 GGDEF domain JV59_17635 2be55e3ba8f306c8fbae1fb8fc3cf4b5 638 SMART SM00283 376 637 4.4E-89 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_17635 2be55e3ba8f306c8fbae1fb8fc3cf4b5 638 SMART SM00304 307 361 1.9E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_17635 2be55e3ba8f306c8fbae1fb8fc3cf4b5 638 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 438 604 2.8E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_17635 2be55e3ba8f306c8fbae1fb8fc3cf4b5 638 Gene3D G3DSA:1.10.287.950 306 638 1.9E-78 T 14-10-2018 JV59_17635 2be55e3ba8f306c8fbae1fb8fc3cf4b5 638 SUPERFAMILY SSF58104 329 638 7.59E-80 T 14-10-2018 JV59_17635 2be55e3ba8f306c8fbae1fb8fc3cf4b5 638 Gene3D G3DSA:3.30.450.20 152 283 9.4E-16 T 14-10-2018 JV59_17635 2be55e3ba8f306c8fbae1fb8fc3cf4b5 638 Pfam PF00672 HAMP domain 308 357 8.4E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_27355 500ce396d668f96bde4d12ee1d3cfcd6 275 SUPERFAMILY SSF47757 3 75 6.15E-15 T 14-10-2018 JV59_27355 500ce396d668f96bde4d12ee1d3cfcd6 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 1.0E-68 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal JV59_27355 500ce396d668f96bde4d12ee1d3cfcd6 275 SMART SM00138 8 272 5.9E-133 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JV59_27355 500ce396d668f96bde4d12ee1d3cfcd6 275 Gene3D G3DSA:3.40.50.150 75 274 1.1E-59 T 14-10-2018 JV59_27355 500ce396d668f96bde4d12ee1d3cfcd6 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 57 3.9E-10 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal JV59_27355 500ce396d668f96bde4d12ee1d3cfcd6 275 Gene3D G3DSA:1.10.155.10 1 74 4.8E-11 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily JV59_27355 500ce396d668f96bde4d12ee1d3cfcd6 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 6.5E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JV59_27355 500ce396d668f96bde4d12ee1d3cfcd6 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 6.5E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JV59_27355 500ce396d668f96bde4d12ee1d3cfcd6 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 6.5E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JV59_27355 500ce396d668f96bde4d12ee1d3cfcd6 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 6.5E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JV59_27355 500ce396d668f96bde4d12ee1d3cfcd6 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 6.5E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JV59_27355 500ce396d668f96bde4d12ee1d3cfcd6 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 6.5E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JV59_27355 500ce396d668f96bde4d12ee1d3cfcd6 275 SUPERFAMILY SSF53335 76 269 7.03E-51 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_34155 951e3c0f36035d09842307c175b99101 1041 SMART SM00089 894 981 6.0E-4 T 14-10-2018 IPR022409 PKD/Chitinase domain JV59_34155 951e3c0f36035d09842307c175b99101 1041 Gene3D G3DSA:2.10.10.20 989 1040 6.2E-8 T 14-10-2018 JV59_34155 951e3c0f36035d09842307c175b99101 1041 SUPERFAMILY SSF51055 993 1039 1.22E-6 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JV59_34155 951e3c0f36035d09842307c175b99101 1041 Gene3D G3DSA:2.60.40.10 888 978 2.3E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_33655 eb323586aed3b70c7df6a4e676a1885d 415 SUPERFAMILY SSF56796 1 381 1.31E-81 T 14-10-2018 JV59_33655 eb323586aed3b70c7df6a4e676a1885d 415 Gene3D G3DSA:3.40.50.1970 1 180 3.8E-48 T 14-10-2018 JV59_33655 eb323586aed3b70c7df6a4e676a1885d 415 Gene3D G3DSA:1.20.1090.10 187 383 1.9E-34 T 14-10-2018 JV59_33655 eb323586aed3b70c7df6a4e676a1885d 415 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 372 3.9E-84 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 JV59_39485 740574fa5ea94266cea349dd261d97a0 370 Gene3D G3DSA:3.20.20.70 7 364 1.8E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_39485 740574fa5ea94266cea349dd261d97a0 370 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 357 2.7E-26 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 JV59_39485 740574fa5ea94266cea349dd261d97a0 370 Pfam PF04055 Radical SAM superfamily 81 222 7.7E-11 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JV59_39485 740574fa5ea94266cea349dd261d97a0 370 SMART SM00876 256 359 1.6E-37 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 JV59_39485 740574fa5ea94266cea349dd261d97a0 370 SUPERFAMILY SSF102114 37 361 1.7E-56 T 14-10-2018 JV59_39485 740574fa5ea94266cea349dd261d97a0 370 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 2 366 4.2E-182 T 14-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 JV59_35440 17726a077ae874d514b2b9f0743fd516 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 4.0E-18 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 JV59_35440 17726a077ae874d514b2b9f0743fd516 80 PIRSF PIRSF006488 1 80 3.0E-22 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 JV59_35440 17726a077ae874d514b2b9f0743fd516 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 66 5.0E-23 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 JV59_35440 17726a077ae874d514b2b9f0743fd516 80 SUPERFAMILY SSF116842 2 72 8.76E-22 T 14-10-2018 JV59_35440 17726a077ae874d514b2b9f0743fd516 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.551 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 JV59_35440 17726a077ae874d514b2b9f0743fd516 80 Gene3D G3DSA:1.10.287.1040 4 79 6.1E-24 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 JV59_35440 17726a077ae874d514b2b9f0743fd516 80 Pfam PF02609 Exonuclease VII small subunit 11 61 7.3E-20 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 JV59_18600 ee053bbf25d702677614935da8ae4130 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 6 107 9.0E-36 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 JV59_18600 ee053bbf25d702677614935da8ae4130 108 Gene3D G3DSA:2.102.10.10 2 108 1.0E-37 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JV59_18600 ee053bbf25d702677614935da8ae4130 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 8 106 1.6E-36 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 JV59_18600 ee053bbf25d702677614935da8ae4130 108 SUPERFAMILY SSF50022 6 107 3.05E-35 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JV59_39890 8d8560b5910b34d8613f1e02075477c3 496 Gene3D G3DSA:3.30.420.150 114 291 2.2E-82 T 14-10-2018 JV59_39890 8d8560b5910b34d8613f1e02075477c3 496 Gene3D G3DSA:3.30.420.40 11 299 2.2E-82 T 14-10-2018 JV59_39890 8d8560b5910b34d8613f1e02075477c3 496 SUPERFAMILY SSF53067 134 304 1.02E-42 T 14-10-2018 JV59_39890 8d8560b5910b34d8613f1e02075477c3 496 Gene3D G3DSA:1.10.3210.10 306 496 2.0E-46 T 14-10-2018 JV59_39890 8d8560b5910b34d8613f1e02075477c3 496 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 4 494 53.013 T 14-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 JV59_39890 8d8560b5910b34d8613f1e02075477c3 496 PIRSF PIRSF001267 1 496 2.6E-178 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 JV59_39890 8d8560b5910b34d8613f1e02075477c3 496 SUPERFAMILY SSF53067 9 129 2.72E-36 T 14-10-2018 JV59_39890 8d8560b5910b34d8613f1e02075477c3 496 SUPERFAMILY SSF109604 309 494 8.47E-41 T 14-10-2018 JV59_39890 8d8560b5910b34d8613f1e02075477c3 496 Pfam PF02541 Ppx/GppA phosphatase family 23 303 6.2E-87 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 JV59_34310 3a3e2d3a06c60871f59dd199989a310e 196 SUPERFAMILY SSF48498 82 195 3.42E-20 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JV59_34310 3a3e2d3a06c60871f59dd199989a310e 196 SUPERFAMILY SSF46689 9 73 4.08E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_34310 3a3e2d3a06c60871f59dd199989a310e 196 Pfam PF13305 WHG domain 93 172 1.2E-12 T 14-10-2018 IPR025996 WHG domain JV59_34310 3a3e2d3a06c60871f59dd199989a310e 196 Gene3D G3DSA:1.10.357.10 1 192 2.6E-41 T 14-10-2018 JV59_34760 dee9f5fa1c7bd06ed64024548e5a0ca3 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 1.0E-84 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 JV59_34760 dee9f5fa1c7bd06ed64024548e5a0ca3 453 PIRSF PIRSF006066 1 265 1.3E-90 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 JV59_34760 dee9f5fa1c7bd06ed64024548e5a0ca3 453 PIRSF PIRSF006066 272 447 4.0E-49 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 JV59_34760 dee9f5fa1c7bd06ed64024548e5a0ca3 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 437 2.0E-116 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit JV59_21155 f1c805433373520e131ebb96f311e62f 327 Gene3D G3DSA:3.40.50.720 125 272 1.4E-82 T 14-10-2018 JV59_21155 f1c805433373520e131ebb96f311e62f 327 SUPERFAMILY SSF51735 115 247 1.25E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_21155 f1c805433373520e131ebb96f311e62f 327 Gene3D G3DSA:3.90.180.10 10 321 1.4E-82 T 14-10-2018 JV59_21155 f1c805433373520e131ebb96f311e62f 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 87 1.7E-4 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JV59_21155 f1c805433373520e131ebb96f311e62f 327 SUPERFAMILY SSF50129 1 140 1.73E-33 T 14-10-2018 IPR011032 GroES-like superfamily JV59_21155 f1c805433373520e131ebb96f311e62f 327 SMART SM00829 10 325 1.9E-21 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JV59_21155 f1c805433373520e131ebb96f311e62f 327 Pfam PF00107 Zinc-binding dehydrogenase 153 263 6.5E-24 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JV59_29080 7780a6ec2a0a6a6e056c2b9cec704e5c 310 Gene3D G3DSA:3.40.50.150 84 291 2.3E-44 T 14-10-2018 JV59_29080 7780a6ec2a0a6a6e056c2b9cec704e5c 310 SUPERFAMILY SSF53335 7 288 2.16E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_29080 7780a6ec2a0a6a6e056c2b9cec704e5c 310 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 310 4.2E-161 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 JV59_30240 3bbe9a00b6cc355c348915da97db6ec5 427 SUPERFAMILY SSF56954 13 421 1.83E-85 T 14-10-2018 JV59_30240 3bbe9a00b6cc355c348915da97db6ec5 427 Pfam PF02321 Outer membrane efflux protein 223 407 2.6E-29 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 JV59_30240 3bbe9a00b6cc355c348915da97db6ec5 427 Pfam PF02321 Outer membrane efflux protein 14 203 1.5E-28 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 JV59_30240 3bbe9a00b6cc355c348915da97db6ec5 427 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 12 422 9.7E-120 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 JV59_30240 3bbe9a00b6cc355c348915da97db6ec5 427 Gene3D G3DSA:1.20.1600.10 12 424 1.4E-83 T 14-10-2018 JV59_31955 111ae28b90e8c6424ee3e1d38754843c 314 SUPERFAMILY SSF49879 6 101 6.42E-16 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 JV59_31955 111ae28b90e8c6424ee3e1d38754843c 314 Gene3D G3DSA:2.60.200.20 5 118 1.9E-13 T 14-10-2018 JV59_31955 111ae28b90e8c6424ee3e1d38754843c 314 Pfam PF00498 FHA domain 30 93 6.0E-11 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 JV59_26660 eb48daa76cdeb8b8013c4c73036e66df 269 Gene3D G3DSA:3.40.50.720 3 264 4.4E-99 T 14-10-2018 JV59_26660 eb48daa76cdeb8b8013c4c73036e66df 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 4.6E-43 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JV59_26660 eb48daa76cdeb8b8013c4c73036e66df 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 2.6E-38 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JV59_26660 eb48daa76cdeb8b8013c4c73036e66df 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 3.6E-97 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JV59_26660 eb48daa76cdeb8b8013c4c73036e66df 269 Gene3D G3DSA:3.30.360.10 127 234 4.4E-99 T 14-10-2018 JV59_26660 eb48daa76cdeb8b8013c4c73036e66df 269 PIRSF PIRSF000161 1 268 1.1E-87 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JV59_26660 eb48daa76cdeb8b8013c4c73036e66df 269 SUPERFAMILY SSF55347 127 236 3.71E-37 T 14-10-2018 JV59_26660 eb48daa76cdeb8b8013c4c73036e66df 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.549 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JV59_26660 eb48daa76cdeb8b8013c4c73036e66df 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JV59_26660 eb48daa76cdeb8b8013c4c73036e66df 269 SUPERFAMILY SSF51735 1 268 6.92E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_35560 30b79f5d006c27b6114f4046a8838243 168 Gene3D G3DSA:3.10.129.10 15 157 3.2E-25 T 14-10-2018 JV59_35560 30b79f5d006c27b6114f4046a8838243 168 Pfam PF14539 Domain of unknown function (DUF4442) 15 151 1.0E-22 T 14-10-2018 IPR027961 Protein of unknown function DUF4442 JV59_35560 30b79f5d006c27b6114f4046a8838243 168 SUPERFAMILY SSF54637 10 156 1.08E-22 T 14-10-2018 IPR029069 HotDog domain superfamily JV59_33110 490dab4c1bc1c01ead9a99fdb7f4892f 209 Gene3D G3DSA:2.40.160.20 19 209 2.7E-10 T 14-10-2018 JV59_33110 490dab4c1bc1c01ead9a99fdb7f4892f 209 SUPERFAMILY SSF56925 42 209 3.92E-6 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JV59_23835 51b9c5debc9e2be21a1bd07fd2e39aa9 304 Gene3D G3DSA:3.40.50.720 2 295 1.2E-36 T 14-10-2018 JV59_23835 51b9c5debc9e2be21a1bd07fd2e39aa9 304 SUPERFAMILY SSF51735 3 254 1.07E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_23835 51b9c5debc9e2be21a1bd07fd2e39aa9 304 Pfam PF00106 short chain dehydrogenase 3 125 5.1E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_17050 1b1d21b553614d4a8c7572ca42578314 414 Pfam PF07690 Major Facilitator Superfamily 23 356 3.5E-37 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_17050 1b1d21b553614d4a8c7572ca42578314 414 Gene3D G3DSA:1.20.1250.20 15 399 4.1E-44 T 14-10-2018 JV59_17050 1b1d21b553614d4a8c7572ca42578314 414 ProSitePatterns PS00216 Sugar transport proteins signature 1. 74 90 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JV59_17050 1b1d21b553614d4a8c7572ca42578314 414 SUPERFAMILY SSF103473 15 399 4.32E-55 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_26180 f14ab206a45c7f83d88de63aecee523b 419 Pfam PF02687 FtsX-like permease family 317 410 7.3E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JV59_26180 f14ab206a45c7f83d88de63aecee523b 419 Pfam PF12704 MacB-like periplasmic core domain 20 205 3.2E-10 T 14-10-2018 IPR025857 MacB-like periplasmic core domain JV59_29665 600878385b962b12c853a5d829366bfc 122 SUPERFAMILY SSF52172 1 96 1.85E-23 T 14-10-2018 IPR011006 CheY-like superfamily JV59_29665 600878385b962b12c853a5d829366bfc 122 Gene3D G3DSA:3.40.50.2300 1 121 1.2E-23 T 14-10-2018 JV59_29665 600878385b962b12c853a5d829366bfc 122 Pfam PF00072 Response regulator receiver domain 4 114 1.0E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_29665 600878385b962b12c853a5d829366bfc 122 SMART SM00448 1 119 7.1E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_19110 fcbe23d9570842567a667eeab1e7ddda 189 Gene3D G3DSA:3.30.70.1070 87 180 3.1E-22 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 JV59_19110 fcbe23d9570842567a667eeab1e7ddda 189 Pfam PF05036 Sporulation related domain 98 172 2.1E-14 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 JV59_19110 fcbe23d9570842567a667eeab1e7ddda 189 SUPERFAMILY SSF110997 97 160 2.22E-8 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 JV59_19440 9965cf2e648d6c4f663513ec2f96164d 105 SUPERFAMILY SSF82771 12 84 3.53E-10 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 JV59_19440 9965cf2e648d6c4f663513ec2f96164d 105 Pfam PF01541 GIY-YIG catalytic domain 13 85 7.7E-13 T 14-10-2018 IPR000305 GIY-YIG endonuclease JV59_19440 9965cf2e648d6c4f663513ec2f96164d 105 Gene3D G3DSA:3.40.1440.10 7 101 7.4E-25 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 JV59_20165 12529d0844838656621ffa9b442e85fc 299 SUPERFAMILY SSF103481 35 137 3.79E-12 T 14-10-2018 JV59_20165 12529d0844838656621ffa9b442e85fc 299 SUPERFAMILY SSF103481 187 285 9.68E-10 T 14-10-2018 JV59_20165 12529d0844838656621ffa9b442e85fc 299 Pfam PF00892 EamA-like transporter family 3 135 1.6E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_20165 12529d0844838656621ffa9b442e85fc 299 Pfam PF00892 EamA-like transporter family 151 280 2.4E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_24010 73ffce41ea8d7b2074a1978356863070 180 Pfam PF13302 Acetyltransferase (GNAT) domain 30 150 7.2E-21 T 14-10-2018 IPR000182 GNAT domain JV59_24010 73ffce41ea8d7b2074a1978356863070 180 SUPERFAMILY SSF55729 6 173 2.42E-40 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_24010 73ffce41ea8d7b2074a1978356863070 180 Gene3D G3DSA:3.40.630.30 1 174 9.3E-43 T 14-10-2018 JV59_16320 bbc5ca5140bafc6b9db73fba61b2fef6 277 Pfam PF03618 Kinase/pyrophosphorylase 10 267 1.5E-73 T 14-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 JV59_16320 bbc5ca5140bafc6b9db73fba61b2fef6 277 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 7 276 67.326 T 14-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein JV59_19350 4012bca72980def5175d4cf6bae766c9 224 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_19350 4012bca72980def5175d4cf6bae766c9 224 Pfam PF00005 ABC transporter 25 171 2.4E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_19350 4012bca72980def5175d4cf6bae766c9 224 SUPERFAMILY SSF52540 5 223 4.94E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_19350 4012bca72980def5175d4cf6bae766c9 224 Gene3D G3DSA:3.40.50.300 3 224 7.9E-70 T 14-10-2018 JV59_19350 4012bca72980def5175d4cf6bae766c9 224 SMART SM00382 34 222 4.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_23215 65edcc3b0daf64f29d719f1930ab7d67 557 Pfam PF03961 Flagellar Assembly Protein A 81 543 3.5E-118 T 14-10-2018 IPR005646 Flagellar assembly protein A JV59_16820 bcbf64c0ec817a322bc0e053e9ae2ef2 252 Pfam PF00005 ABC transporter 22 177 3.0E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_16820 bcbf64c0ec817a322bc0e053e9ae2ef2 252 SMART SM00382 30 224 8.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_16820 bcbf64c0ec817a322bc0e053e9ae2ef2 252 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_16820 bcbf64c0ec817a322bc0e053e9ae2ef2 252 SUPERFAMILY SSF52540 3 248 4.12E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_16820 bcbf64c0ec817a322bc0e053e9ae2ef2 252 Gene3D G3DSA:3.40.50.300 4 252 1.9E-60 T 14-10-2018 JV59_32695 09ffa6896d590ae72b905b66ccbad449 173 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 173 1.8E-60 T 14-10-2018 IPR018636 Protein of unknown function DUF2058 JV59_21980 9f69c9161fe6fd2aa3fc3836c99f665b 587 Pfam PF04183 IucA / IucC family 136 372 9.1E-58 T 14-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 JV59_21980 9f69c9161fe6fd2aa3fc3836c99f665b 587 Gene3D G3DSA:1.10.510.40 362 536 3.2E-13 T 14-10-2018 JV59_21980 9f69c9161fe6fd2aa3fc3836c99f665b 587 Pfam PF06276 Ferric iron reductase FhuF-like transporter 403 563 2.0E-28 T 14-10-2018 IPR022770 Ferric iron reductase FhuF domain JV59_01495 fe94a2646c4d7d7255a10988707478b1 176 Gene3D G3DSA:3.40.50.2020 1 176 3.6E-65 T 14-10-2018 JV59_01495 fe94a2646c4d7d7255a10988707478b1 176 SUPERFAMILY SSF53271 3 175 4.85E-55 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like JV59_01495 fe94a2646c4d7d7255a10988707478b1 176 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 3.8E-74 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 JV59_01495 fe94a2646c4d7d7255a10988707478b1 176 Pfam PF00156 Phosphoribosyl transferase domain 12 159 2.9E-25 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 JV59_21210 e6ce67c55fbfcf729944b719eb3059b8 98 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 7 95 3.0E-26 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 JV59_21210 e6ce67c55fbfcf729944b719eb3059b8 98 Pfam PF03334 Na+/H+ antiporter subunit 8 85 1.3E-23 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 JV59_37435 16e38e6b7cdcf2c8a98be1daacbe55ab 102 Gene3D G3DSA:3.30.750.24 12 100 4.0E-11 T 14-10-2018 IPR036513 STAS domain superfamily JV59_37435 16e38e6b7cdcf2c8a98be1daacbe55ab 102 SUPERFAMILY SSF52091 14 97 7.06E-16 T 14-10-2018 IPR036513 STAS domain superfamily JV59_37435 16e38e6b7cdcf2c8a98be1daacbe55ab 102 Pfam PF13466 STAS domain 16 92 9.4E-18 T 14-10-2018 IPR002645 STAS domain JV59_24865 dc18167615d85d008db7a7779e03e2ec 84 Gene3D G3DSA:2.10.260.10 1 81 9.6E-14 T 14-10-2018 JV59_24865 dc18167615d85d008db7a7779e03e2ec 84 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 50 2.4E-8 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 JV59_24865 dc18167615d85d008db7a7779e03e2ec 84 SUPERFAMILY SSF89447 1 63 6.63E-14 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily JV59_24865 dc18167615d85d008db7a7779e03e2ec 84 SMART SM00966 6 51 3.4E-7 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 JV59_17155 6cda8f1121d06f602e7d318c74914370 318 Pfam PF01032 FecCD transport family 2 314 9.4E-89 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 JV59_17155 6cda8f1121d06f602e7d318c74914370 318 SUPERFAMILY SSF81345 2 314 1.83E-74 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JV59_17155 6cda8f1121d06f602e7d318c74914370 318 Gene3D G3DSA:1.10.3470.10 1 317 2.9E-93 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JV59_27320 33029be5dac4ef60193c199ca8b98e36 377 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 25 110 7.5E-24 T 14-10-2018 IPR032370 Flagellar assembly protein T, N-terminal JV59_27320 33029be5dac4ef60193c199ca8b98e36 377 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 299 375 2.0E-25 T 14-10-2018 IPR032388 Flagellar assembly protein T, C-terminal JV59_27320 33029be5dac4ef60193c199ca8b98e36 377 Gene3D G3DSA:3.30.1660.40 24 113 1.3E-35 T 14-10-2018 IPR038180 FlgT, N-terminal domain superfamily JV59_27320 33029be5dac4ef60193c199ca8b98e36 377 Gene3D G3DSA:2.40.10.410 291 377 1.1E-34 T 14-10-2018 IPR038165 FlgT, C-terminal domain superfamily JV59_27320 33029be5dac4ef60193c199ca8b98e36 377 Pfam PF16539 Flagellar assembly protein T, middle domain 115 256 2.5E-41 T 14-10-2018 IPR032386 Flagellar assembly protein T, middle domain JV59_27320 33029be5dac4ef60193c199ca8b98e36 377 Gene3D G3DSA:3.40.50.10610 114 290 2.9E-54 T 14-10-2018 JV59_16965 746ea16140050350c70dedc2677371b7 214 Pfam PF03591 AzlC protein 3 141 5.0E-36 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease JV59_17600 c5c57ed376c364e198870c9710309445 154 SUPERFAMILY SSF141523 18 152 1.96E-25 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like JV59_17600 c5c57ed376c364e198870c9710309445 154 Pfam PF03734 L,D-transpeptidase catalytic domain 18 152 1.3E-20 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 JV59_17600 c5c57ed376c364e198870c9710309445 154 Gene3D G3DSA:2.40.440.10 10 154 2.7E-18 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like JV59_36860 2e6896acd08f10286c43949c0ffcd287 203 Gene3D G3DSA:2.30.30.40 30 86 5.4E-9 T 14-10-2018 JV59_36860 2e6896acd08f10286c43949c0ffcd287 203 Pfam PF08239 Bacterial SH3 domain 32 82 1.1E-8 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type JV59_36860 2e6896acd08f10286c43949c0ffcd287 203 SMART SM00287 20 86 6.2E-10 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type JV59_36860 2e6896acd08f10286c43949c0ffcd287 203 PIRSF PIRSF006158 1 203 3.5E-67 T 14-10-2018 IPR016476 SH3 domain protein JV59_36860 2e6896acd08f10286c43949c0ffcd287 203 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 24 202 1.8E-51 T 14-10-2018 IPR016476 SH3 domain protein JV59_28860 1e297b8272949ed99f7b538456743028 265 Pfam PF07103 Protein of unknown function (DUF1365) 10 242 1.1E-66 T 14-10-2018 IPR010775 Protein of unknown function DUF1365 JV59_17770 270b530c7eca15228e3cc1a1401efce9 151 Pfam PF11911 Protein of unknown function (DUF3429) 10 149 3.8E-25 T 14-10-2018 IPR021836 Protein of unknown function DUF3429 JV59_19195 45a96efc9bdaf53e147d06f84df701dc 458 SUPERFAMILY SSF50985 35 280 3.58E-35 T 14-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II JV59_19195 45a96efc9bdaf53e147d06f84df701dc 458 SUPERFAMILY SSF50978 210 444 3.48E-11 T 14-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 JV59_19195 45a96efc9bdaf53e147d06f84df701dc 458 Gene3D G3DSA:2.130.10.30 6 245 6.2E-30 T 14-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II JV59_19195 45a96efc9bdaf53e147d06f84df701dc 458 Gene3D G3DSA:2.130.10.30 246 457 1.5E-26 T 14-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II JV59_34770 86eb2c83a1459be55095f0737237ef12 331 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 317 5.0E-106 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 JV59_34770 86eb2c83a1459be55095f0737237ef12 331 Gene3D G3DSA:3.40.190.170 27 328 2.7E-93 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily JV59_34770 86eb2c83a1459be55095f0737237ef12 331 PIRSF PIRSF006470 1 331 4.1E-126 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 JV59_34770 86eb2c83a1459be55095f0737237ef12 331 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 278 2.9E-81 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 JV59_26310 016547fed291164ba8dbc380f545279d 216 Pfam PF04350 Pilus assembly protein, PilO 85 180 9.1E-5 T 14-10-2018 IPR007445 Pilus assembly protein, PilO JV59_26310 016547fed291164ba8dbc380f545279d 216 Pfam PF04612 Type II secretion system (T2SS), protein M 7 72 1.2E-7 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 JV59_21270 0629eae0dfe3aaecc2fd5a938a0e6223 185 Gene3D G3DSA:2.60.120.10 99 185 3.2E-18 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_21270 0629eae0dfe3aaecc2fd5a938a0e6223 185 Gene3D G3DSA:1.10.260.40 8 74 1.0E-15 T 14-10-2018 JV59_21270 0629eae0dfe3aaecc2fd5a938a0e6223 185 SMART SM00530 14 69 2.1E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_21270 0629eae0dfe3aaecc2fd5a938a0e6223 185 Pfam PF07883 Cupin domain 113 180 1.4E-8 T 14-10-2018 IPR013096 Cupin 2, conserved barrel JV59_21270 0629eae0dfe3aaecc2fd5a938a0e6223 185 SUPERFAMILY SSF47413 9 73 3.66E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_21270 0629eae0dfe3aaecc2fd5a938a0e6223 185 SUPERFAMILY SSF51182 62 181 1.09E-20 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JV59_21270 0629eae0dfe3aaecc2fd5a938a0e6223 185 Pfam PF01381 Helix-turn-helix 17 67 4.1E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_16185 368e0ef3909896ec30e1503ea6ae46fa 107 SUPERFAMILY SSF47752 35 102 2.22E-7 T 14-10-2018 IPR036831 HNS-dependent expression A superfamily GO:0030288|GO:0071468 JV59_16185 368e0ef3909896ec30e1503ea6ae46fa 107 ProDom PD065392 HDEA PRECURSOR SIGNAL PERIPLASMIC 3D-STRUCTURE DIRECT 10K-S SEQUENCING 40 93 0.002 T 14-10-2018 IPR024972 HNS-dependent expression A GO:0030288|GO:0071468 JV59_16185 368e0ef3909896ec30e1503ea6ae46fa 107 Gene3D G3DSA:1.10.890.10 25 107 3.7E-10 T 14-10-2018 IPR038303 HNS-dependent expression A/B superfamily JV59_16185 368e0ef3909896ec30e1503ea6ae46fa 107 Pfam PF06411 HdeA/HdeB family 11 96 6.1E-11 T 14-10-2018 IPR010486 HNS-dependent expression A/B JV59_17280 60d409144ea260153e320a844efe5e55 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_17280 60d409144ea260153e320a844efe5e55 501 Pfam PF00005 ABC transporter 270 423 7.9E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_17280 60d409144ea260153e320a844efe5e55 501 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_17280 60d409144ea260153e320a844efe5e55 501 Gene3D G3DSA:3.40.50.300 1 237 1.2E-58 T 14-10-2018 JV59_17280 60d409144ea260153e320a844efe5e55 501 SUPERFAMILY SSF52540 269 478 1.13E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_17280 60d409144ea260153e320a844efe5e55 501 SMART SM00382 278 472 1.3E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_17280 60d409144ea260153e320a844efe5e55 501 SMART SM00382 30 219 6.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_17280 60d409144ea260153e320a844efe5e55 501 Pfam PF00005 ABC transporter 21 170 1.0E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_17280 60d409144ea260153e320a844efe5e55 501 Gene3D G3DSA:3.40.50.300 266 496 6.0E-46 T 14-10-2018 JV59_17280 60d409144ea260153e320a844efe5e55 501 SUPERFAMILY SSF52540 5 224 3.17E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_23660 6b3dcca9cedcf7f89db5ef0ff08ae0c5 444 SMART SM00388 246 311 6.8E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_23660 6b3dcca9cedcf7f89db5ef0ff08ae0c5 444 SUPERFAMILY SSF55874 327 436 2.1E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_23660 6b3dcca9cedcf7f89db5ef0ff08ae0c5 444 Gene3D G3DSA:3.30.565.10 322 441 2.9E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_23660 6b3dcca9cedcf7f89db5ef0ff08ae0c5 444 Gene3D G3DSA:1.10.287.130 195 306 1.7E-13 T 14-10-2018 JV59_23660 6b3dcca9cedcf7f89db5ef0ff08ae0c5 444 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 435 6.9E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_23660 6b3dcca9cedcf7f89db5ef0ff08ae0c5 444 SMART SM00387 352 444 3.3E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_23660 6b3dcca9cedcf7f89db5ef0ff08ae0c5 444 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 310 7.5E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_23660 6b3dcca9cedcf7f89db5ef0ff08ae0c5 444 SUPERFAMILY SSF47384 229 310 5.1E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_30505 dc72ef79db747a83d485cf953e058ea0 114 PIRSF PIRSF028299 1 114 3.5E-18 T 14-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 JV59_30505 dc72ef79db747a83d485cf953e058ea0 114 Pfam PF11777 Protein of unknown function (DUF3316) 3 108 2.3E-11 T 14-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 JV59_06840 1be4b19384e92904f941ebba0b226756 344 Gene3D G3DSA:3.40.190.10 132 316 8.2E-107 T 14-10-2018 JV59_06840 1be4b19384e92904f941ebba0b226756 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 204 223 9.5E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_06840 1be4b19384e92904f941ebba0b226756 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 49 70 9.5E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_06840 1be4b19384e92904f941ebba0b226756 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 149 163 9.5E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_06840 1be4b19384e92904f941ebba0b226756 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 33 49 9.5E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_06840 1be4b19384e92904f941ebba0b226756 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 248 267 9.5E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_06840 1be4b19384e92904f941ebba0b226756 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 92 105 9.5E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_06840 1be4b19384e92904f941ebba0b226756 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 123 139 9.5E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_06840 1be4b19384e92904f941ebba0b226756 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 167 186 9.5E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_06840 1be4b19384e92904f941ebba0b226756 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 76 90 9.5E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_06840 1be4b19384e92904f941ebba0b226756 344 Gene3D G3DSA:3.40.190.10 32 311 8.2E-107 T 14-10-2018 JV59_06840 1be4b19384e92904f941ebba0b226756 344 PIRSF PIRSF019574 1 344 1.8E-107 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JV59_06840 1be4b19384e92904f941ebba0b226756 344 Pfam PF13416 Bacterial extracellular solute-binding protein 43 301 3.0E-35 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein JV59_06840 1be4b19384e92904f941ebba0b226756 344 SUPERFAMILY SSF53850 28 327 1.18E-83 T 14-10-2018 JV59_23190 11feebaab32663020a843a91c41851e0 214 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 23 183 28.151 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 JV59_23190 11feebaab32663020a843a91c41851e0 214 Gene3D G3DSA:3.30.1330.200 25 190 4.8E-47 T 14-10-2018 IPR038592 CheD-like superfamily JV59_23190 11feebaab32663020a843a91c41851e0 214 SUPERFAMILY SSF64438 28 187 2.11E-47 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic JV59_23190 11feebaab32663020a843a91c41851e0 214 Pfam PF03975 CheD chemotactic sensory transduction 83 179 1.1E-29 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 JV59_26125 9738148eeb2f10d97ed94c7947fedcf2 62 Gene3D G3DSA:1.10.10.1100 1 56 1.2E-18 T 14-10-2018 JV59_26125 9738148eeb2f10d97ed94c7947fedcf2 62 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 4.1E-13 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain JV59_22490 4c23bdeb97fb5bbbf78b87d292de6ac6 172 Pfam PF00857 Isochorismatase family 5 163 2.0E-36 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 JV59_22490 4c23bdeb97fb5bbbf78b87d292de6ac6 172 SUPERFAMILY SSF52499 2 171 7.72E-46 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 JV59_22490 4c23bdeb97fb5bbbf78b87d292de6ac6 172 Gene3D G3DSA:3.40.50.850 1 172 2.4E-43 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 JV59_00295 44965a80606f930264b85897b27e8534 295 Pfam PF00892 EamA-like transporter family 5 134 4.9E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_00295 44965a80606f930264b85897b27e8534 295 Pfam PF00892 EamA-like transporter family 156 294 2.5E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_00295 44965a80606f930264b85897b27e8534 295 SUPERFAMILY SSF103481 210 294 1.96E-9 T 14-10-2018 JV59_00295 44965a80606f930264b85897b27e8534 295 SUPERFAMILY SSF103481 36 140 1.96E-11 T 14-10-2018 JV59_17790 0a58e2e7af74f0d25eecdd6edba13f83 357 Pfam PF01758 Sodium Bile acid symporter family 59 255 3.6E-62 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 JV59_17790 0a58e2e7af74f0d25eecdd6edba13f83 357 PIRSF PIRSF005508 1 357 8.1E-137 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 JV59_17790 0a58e2e7af74f0d25eecdd6edba13f83 357 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 14 343 5.2E-138 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 JV59_17790 0a58e2e7af74f0d25eecdd6edba13f83 357 Gene3D G3DSA:1.20.1530.20 5 343 2.2E-23 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily JV59_32585 b31986cbf47a8dcde7bd636349574ae5 284 Pfam PF00892 EamA-like transporter family 3 135 1.5E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_32585 b31986cbf47a8dcde7bd636349574ae5 284 Pfam PF00892 EamA-like transporter family 145 274 1.1E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_32585 b31986cbf47a8dcde7bd636349574ae5 284 SUPERFAMILY SSF103481 179 278 7.85E-12 T 14-10-2018 JV59_32585 b31986cbf47a8dcde7bd636349574ae5 284 SUPERFAMILY SSF103481 38 138 4.84E-14 T 14-10-2018 JV59_33465 f2f191efe436344bc69e4c1eff19b6e9 253 SUPERFAMILY SSF53850 18 240 3.17E-31 T 14-10-2018 JV59_33465 f2f191efe436344bc69e4c1eff19b6e9 253 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 240 3.7E-14 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_33465 f2f191efe436344bc69e4c1eff19b6e9 253 Gene3D G3DSA:3.40.190.10 103 202 2.6E-18 T 14-10-2018 JV59_33465 f2f191efe436344bc69e4c1eff19b6e9 253 Gene3D G3DSA:3.40.190.10 47 238 2.6E-18 T 14-10-2018 JV59_30425 dff11a804edab63689e4a8bfe700e1a5 253 SMART SM00062 25 249 0.0031 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_30425 dff11a804edab63689e4a8bfe700e1a5 253 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 235 1.2E-22 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_30425 dff11a804edab63689e4a8bfe700e1a5 253 Gene3D G3DSA:3.40.190.10 32 235 3.8E-24 T 14-10-2018 JV59_30425 dff11a804edab63689e4a8bfe700e1a5 253 SUPERFAMILY SSF53850 26 236 4.44E-30 T 14-10-2018 JV59_30425 dff11a804edab63689e4a8bfe700e1a5 253 Gene3D G3DSA:3.40.190.10 110 208 3.8E-24 T 14-10-2018 JV59_17185 6faf5a2a742bed3555cd7fc6d59680c7 84 Gene3D G3DSA:2.30.30.400 2 81 7.1E-15 T 14-10-2018 IPR038626 Rof-like superfamily JV59_17185 6faf5a2a742bed3555cd7fc6d59680c7 84 SUPERFAMILY SSF101744 1 80 1.15E-19 T 14-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 JV59_17185 6faf5a2a742bed3555cd7fc6d59680c7 84 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 1 80 2.9E-28 T 14-10-2018 IPR009778 Modulator of Rho-dependent transcription termination JV59_33400 1950b83768e93532b028a44a0ee6794c 441 Pfam PF06629 MltA-interacting protein MipA 47 243 8.2E-20 T 14-10-2018 IPR010583 MltA-interacting MipA JV59_28000 f7948286750f38165675de45072c1a56 125 TIGRFAM TIGR00526 folB_dom: FolB domain 6 118 2.0E-28 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 JV59_28000 f7948286750f38165675de45072c1a56 125 SUPERFAMILY SSF55620 4 116 3.84E-30 T 14-10-2018 JV59_28000 f7948286750f38165675de45072c1a56 125 Pfam PF02152 Dihydroneopterin aldolase 7 115 3.0E-26 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 JV59_28000 f7948286750f38165675de45072c1a56 125 Gene3D G3DSA:3.30.1130.10 1 118 5.0E-41 T 14-10-2018 JV59_28000 f7948286750f38165675de45072c1a56 125 SMART SM00905 7 117 5.3E-34 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 JV59_35345 8b079f82030875e263436ccf6d5ee1d2 95 Pfam PF09904 Winged helix-turn helix 4 91 1.1E-37 T 14-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 JV59_35345 8b079f82030875e263436ccf6d5ee1d2 95 Gene3D G3DSA:1.10.10.10 2 95 3.6E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_35345 8b079f82030875e263436ccf6d5ee1d2 95 PIRSF PIRSF037266 1 94 7.9E-41 T 14-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 JV59_16575 2dc51ef27ef4837ed5b43dcdaea23f4a 170 SUPERFAMILY SSF52374 1 170 2.6E-26 T 14-10-2018 JV59_16575 2dc51ef27ef4837ed5b43dcdaea23f4a 170 Pfam PF01467 Cytidylyltransferase-like 7 144 1.8E-7 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JV59_16575 2dc51ef27ef4837ed5b43dcdaea23f4a 170 Gene3D G3DSA:3.40.50.620 1 170 7.9E-45 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_27940 cf473890ba37a9295767fb38c721f083 242 Gene3D G3DSA:2.40.160.10 18 242 2.0E-5 T 14-10-2018 IPR023614 Porin domain superfamily JV59_27940 cf473890ba37a9295767fb38c721f083 242 SUPERFAMILY SSF56935 24 242 1.99E-8 T 14-10-2018 JV59_28720 3ca8aa3dde8f5c2d79a08f63a6117bc0 299 Pfam PF00480 ROK family 3 295 4.1E-63 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 JV59_28720 3ca8aa3dde8f5c2d79a08f63a6117bc0 299 SUPERFAMILY SSF53067 2 295 1.99E-53 T 14-10-2018 JV59_28720 3ca8aa3dde8f5c2d79a08f63a6117bc0 299 Gene3D G3DSA:3.30.420.40 118 286 2.6E-68 T 14-10-2018 JV59_28720 3ca8aa3dde8f5c2d79a08f63a6117bc0 299 ProSitePatterns PS01125 ROK family signature. 130 157 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 JV59_28720 3ca8aa3dde8f5c2d79a08f63a6117bc0 299 Gene3D G3DSA:3.30.420.40 4 293 2.6E-68 T 14-10-2018 JV59_22220 1ba97659512528f9b35a8c318e983886 466 SUPERFAMILY SSF56322 9 444 2.09E-89 T 14-10-2018 IPR005801 ADC synthase GO:0009058 JV59_22220 1ba97659512528f9b35a8c318e983886 466 Pfam PF00425 chorismate binding enzyme 182 436 1.4E-68 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal JV59_22220 1ba97659512528f9b35a8c318e983886 466 Gene3D G3DSA:3.60.120.10 8 446 2.8E-122 T 14-10-2018 IPR005801 ADC synthase GO:0009058 JV59_22220 1ba97659512528f9b35a8c318e983886 466 TIGRFAM TIGR03494 salicyl_syn: salicylate synthase 22 446 5.7E-182 T 14-10-2018 IPR019996 Salicylate synthase GO:0008909|GO:0016833 KEGG: 00130+5.4.4.2|KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JV59_17560 29d724cf3ef291f442d371f93324361c 419 Gene3D G3DSA:1.20.1740.10 2 416 3.1E-58 T 14-10-2018 JV59_17560 29d724cf3ef291f442d371f93324361c 419 PIRSF PIRSF006060 1 414 3.0E-58 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 JV59_17560 29d724cf3ef291f442d371f93324361c 419 Pfam PF13520 Amino acid permease 11 365 6.8E-31 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 JV59_17900 d317915ba541db811d6303bde4f5e9f0 261 SUPERFAMILY SSF56112 15 214 2.04E-11 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily JV59_34280 ec7d215b38da74dec722345ed9c62250 283 PRINTS PR00118 Beta-lactamase class A signature 196 211 1.5E-60 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 JV59_34280 ec7d215b38da74dec722345ed9c62250 283 PRINTS PR00118 Beta-lactamase class A signature 25 49 1.5E-60 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 JV59_34280 ec7d215b38da74dec722345ed9c62250 283 PRINTS PR00118 Beta-lactamase class A signature 213 228 1.5E-60 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 JV59_34280 ec7d215b38da74dec722345ed9c62250 283 PRINTS PR00118 Beta-lactamase class A signature 134 158 1.5E-60 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 JV59_34280 ec7d215b38da74dec722345ed9c62250 283 PRINTS PR00118 Beta-lactamase class A signature 160 185 1.5E-60 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 JV59_34280 ec7d215b38da74dec722345ed9c62250 283 PRINTS PR00118 Beta-lactamase class A signature 56 73 1.5E-60 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 JV59_34280 ec7d215b38da74dec722345ed9c62250 283 PRINTS PR00118 Beta-lactamase class A signature 98 123 1.5E-60 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 JV59_34280 ec7d215b38da74dec722345ed9c62250 283 SUPERFAMILY SSF56601 21 281 1.06E-74 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JV59_34280 ec7d215b38da74dec722345ed9c62250 283 Pfam PF13354 Beta-lactamase enzyme family 46 252 3.4E-39 T 14-10-2018 JV59_34280 ec7d215b38da74dec722345ed9c62250 283 Gene3D G3DSA:3.40.710.10 18 282 1.1E-71 T 14-10-2018 JV59_32940 9fa2c9304fbe0f2b561d9c2353837023 179 SUPERFAMILY SSF55166 53 179 2.62E-34 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JV59_32940 9fa2c9304fbe0f2b561d9c2353837023 179 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 28 9.0E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal JV59_32940 9fa2c9304fbe0f2b561d9c2353837023 179 Gene3D G3DSA:3.30.1380.10 73 179 1.0E-11 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JV59_32940 9fa2c9304fbe0f2b561d9c2353837023 179 Pfam PF05951 Bacterial protein of unknown function (DUF882) 32 179 4.1E-70 T 14-10-2018 IPR010275 Protein of unknown function DUF882 JV59_33975 eb7b7281f81e6b88a8f75397003ebe47 314 SUPERFAMILY SSF47616 163 312 1.24E-37 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily JV59_33975 eb7b7281f81e6b88a8f75397003ebe47 314 Gene3D G3DSA:1.20.1050.10 168 314 2.7E-71 T 14-10-2018 JV59_33975 eb7b7281f81e6b88a8f75397003ebe47 314 SUPERFAMILY SSF52833 31 150 7.35E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_33975 eb7b7281f81e6b88a8f75397003ebe47 314 Gene3D G3DSA:3.40.30.130 1 167 1.9E-63 T 14-10-2018 JV59_33975 eb7b7281f81e6b88a8f75397003ebe47 314 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 7.8E-22 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 JV59_33975 eb7b7281f81e6b88a8f75397003ebe47 314 PIRSF PIRSF015753 4 312 3.3E-134 T 14-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 JV59_33975 eb7b7281f81e6b88a8f75397003ebe47 314 Pfam PF13410 Glutathione S-transferase, C-terminal domain 191 263 1.4E-13 T 14-10-2018 JV59_38335 e07fba7fd126c98752bdf14ec034e352 227 Pfam PF00881 Nitroreductase family 33 202 5.3E-21 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 JV59_38335 e07fba7fd126c98752bdf14ec034e352 227 Gene3D G3DSA:3.40.109.10 11 226 4.3E-51 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JV59_38335 e07fba7fd126c98752bdf14ec034e352 227 SUPERFAMILY SSF55469 22 226 3.66E-42 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JV59_01415 5e080ec49b6d2e726edf7a192096c928 202 Pfam PF01121 Dephospho-CoA kinase 4 181 5.3E-70 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 JV59_01415 5e080ec49b6d2e726edf7a192096c928 202 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 197 27.481 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 JV59_01415 5e080ec49b6d2e726edf7a192096c928 202 SUPERFAMILY SSF52540 1 193 2.36E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_01415 5e080ec49b6d2e726edf7a192096c928 202 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 188 7.3E-64 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 JV59_01415 5e080ec49b6d2e726edf7a192096c928 202 Gene3D G3DSA:3.40.50.300 1 202 1.8E-66 T 14-10-2018 JV59_29120 f3a56666e11b01fc64bcd6fd29c65c87 132 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 14 129 1.0E-46 T 14-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein JV59_29120 f3a56666e11b01fc64bcd6fd29c65c87 132 Gene3D G3DSA:3.30.300.250 20 130 8.9E-45 T 14-10-2018 JV59_29120 f3a56666e11b01fc64bcd6fd29c65c87 132 PIRSF PIRSF007010 1 132 7.7E-51 T 14-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein JV59_27615 b3ce96f67ea6a783ee13495f116f8d77 230 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 28.036 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 JV59_27615 b3ce96f67ea6a783ee13495f116f8d77 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 209 1.1E-87 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 JV59_27615 b3ce96f67ea6a783ee13495f116f8d77 230 PIRSF PIRSF006102 1 219 3.7E-78 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 JV59_27615 b3ce96f67ea6a783ee13495f116f8d77 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 200 2.3E-65 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 JV59_16735 8a41831e9c1b68389463091efd15abfb 227 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_16735 8a41831e9c1b68389463091efd15abfb 227 SMART SM00382 30 224 1.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_16735 8a41831e9c1b68389463091efd15abfb 227 Pfam PF00005 ABC transporter 21 169 1.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_16735 8a41831e9c1b68389463091efd15abfb 227 SUPERFAMILY SSF52540 1 221 8.78E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_16735 8a41831e9c1b68389463091efd15abfb 227 Gene3D G3DSA:3.40.50.300 1 225 9.0E-67 T 14-10-2018 JV59_32995 4754b719b016f4184e4a7baaf556a410 195 Gene3D G3DSA:1.10.3210.10 1 195 2.0E-53 T 14-10-2018 JV59_32995 4754b719b016f4184e4a7baaf556a410 195 SUPERFAMILY SSF109604 4 185 5.97E-44 T 14-10-2018 JV59_32995 4754b719b016f4184e4a7baaf556a410 195 Pfam PF13023 HD domain 15 177 4.0E-51 T 14-10-2018 IPR006674 HD domain JV59_21640 1c6464cb3a2dfd48d45cabca0b6271e6 245 Pfam PF07238 PilZ domain 132 235 5.7E-14 T 14-10-2018 IPR009875 PilZ domain GO:0035438 JV59_21640 1c6464cb3a2dfd48d45cabca0b6271e6 245 Pfam PF12945 Flagellar protein YcgR 36 125 1.6E-11 T 14-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal JV59_21640 1c6464cb3a2dfd48d45cabca0b6271e6 245 Gene3D G3DSA:2.30.110.10 21 134 5.2E-47 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JV59_21640 1c6464cb3a2dfd48d45cabca0b6271e6 245 SUPERFAMILY SSF141371 136 244 1.05E-28 T 14-10-2018 JV59_21640 1c6464cb3a2dfd48d45cabca0b6271e6 245 SUPERFAMILY SSF141371 22 135 2.0E-31 T 14-10-2018 JV59_21640 1c6464cb3a2dfd48d45cabca0b6271e6 245 Gene3D G3DSA:2.40.10.220 135 245 6.2E-41 T 14-10-2018 JV59_33355 de9c6506f48aee5db75d4dec61d51e49 88 Pfam PF11747 Killing trait 11 78 4.3E-25 T 14-10-2018 IPR021070 Killing trait, RebB JV59_31165 d2f4849fc50c947da021295085747155 214 SMART SM00448 9 122 1.5E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_31165 d2f4849fc50c947da021295085747155 214 SUPERFAMILY SSF46894 150 214 7.48E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_31165 d2f4849fc50c947da021295085747155 214 Pfam PF00072 Response regulator receiver domain 11 123 4.1E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_31165 d2f4849fc50c947da021295085747155 214 SUPERFAMILY SSF52172 9 135 2.13E-32 T 14-10-2018 IPR011006 CheY-like superfamily JV59_31165 d2f4849fc50c947da021295085747155 214 SMART SM00421 152 209 8.0E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_31165 d2f4849fc50c947da021295085747155 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 209 3.1E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_31165 d2f4849fc50c947da021295085747155 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_31165 d2f4849fc50c947da021295085747155 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 4.3E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_31165 d2f4849fc50c947da021295085747155 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 4.3E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_31165 d2f4849fc50c947da021295085747155 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 4.3E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JV59_31165 d2f4849fc50c947da021295085747155 214 Gene3D G3DSA:3.40.50.12740 9 214 2.8E-59 T 14-10-2018 JV59_30730 c2b3eb029ffcae56436a1de257f99613 105 Gene3D G3DSA:3.30.750.24 7 104 2.1E-19 T 14-10-2018 IPR036513 STAS domain superfamily JV59_30730 c2b3eb029ffcae56436a1de257f99613 105 Pfam PF01740 STAS domain 6 98 7.2E-13 T 14-10-2018 IPR002645 STAS domain JV59_30730 c2b3eb029ffcae56436a1de257f99613 105 SUPERFAMILY SSF52091 6 100 2.55E-20 T 14-10-2018 IPR036513 STAS domain superfamily JV59_26025 25a5383ac73fb56235ebffe8ed5dd286 211 SUPERFAMILY SSF46689 2 72 6.8E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_26025 25a5383ac73fb56235ebffe8ed5dd286 211 Gene3D G3DSA:1.10.357.10 1 209 4.2E-65 T 14-10-2018 JV59_26025 25a5383ac73fb56235ebffe8ed5dd286 211 Pfam PF13972 Bacterial transcriptional repressor 57 199 5.4E-41 T 14-10-2018 IPR025722 Bacterial transcriptional repressor TetR JV59_26025 25a5383ac73fb56235ebffe8ed5dd286 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 3.2E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_26025 25a5383ac73fb56235ebffe8ed5dd286 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 3.2E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_26025 25a5383ac73fb56235ebffe8ed5dd286 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 2.0E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_21655 228639b471d3afa4720e8eb8a1a1aff4 300 SUPERFAMILY SSF103481 40 138 1.7E-13 T 14-10-2018 JV59_21655 228639b471d3afa4720e8eb8a1a1aff4 300 SUPERFAMILY SSF103481 187 284 4.18E-15 T 14-10-2018 JV59_21655 228639b471d3afa4720e8eb8a1a1aff4 300 Pfam PF00892 EamA-like transporter family 151 281 1.7E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_21655 228639b471d3afa4720e8eb8a1a1aff4 300 Pfam PF00892 EamA-like transporter family 9 136 2.1E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_35715 87e5d98b9d21b226a4d3a21af972bee8 145 SUPERFAMILY SSF54523 17 112 1.33E-16 T 14-10-2018 JV59_35715 87e5d98b9d21b226a4d3a21af972bee8 145 Gene3D G3DSA:3.30.700.10 18 143 3.9E-16 T 14-10-2018 JV59_35715 87e5d98b9d21b226a4d3a21af972bee8 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 37 4.9E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_35715 87e5d98b9d21b226a4d3a21af972bee8 145 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 38 121 2.2E-13 T 14-10-2018 IPR031982 Type IV minor pilin ComP JV59_35690 4131121fad9d33361b8dbee7366a054e 519 Pfam PF03806 AbgT putative transporter family 19 517 1.1E-211 T 14-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 JV59_26645 30a3b5a010055711086b96718ed7ec91 260 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 22 246 22.027 T 14-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 JV59_26645 30a3b5a010055711086b96718ed7ec91 260 Gene3D G3DSA:3.40.50.11690 124 251 6.4E-37 T 14-10-2018 JV59_26645 30a3b5a010055711086b96718ed7ec91 260 Gene3D G3DSA:3.10.20.310 54 122 1.7E-24 T 14-10-2018 JV59_26645 30a3b5a010055711086b96718ed7ec91 260 Pfam PF08478 POTRA domain, FtsQ-type 53 122 1.3E-16 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type JV59_26645 30a3b5a010055711086b96718ed7ec91 260 Pfam PF03799 Cell division protein FtsQ 126 238 3.2E-24 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB JV59_25680 e6635f2ea2fd91fa01fcd0ccad610c50 360 Gene3D G3DSA:1.10.10.2830 180 297 1.8E-26 T 14-10-2018 JV59_25680 e6635f2ea2fd91fa01fcd0ccad610c50 360 Pfam PF08775 ParB family 232 354 2.6E-29 T 14-10-2018 IPR014884 ParB protein family, C-terminal JV59_25680 e6635f2ea2fd91fa01fcd0ccad610c50 360 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 97 262 1.1E-16 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 JV59_31725 f9af0e9980a77c8714ec565c7ad00021 278 SMART SM00316 145 207 0.25 T 14-10-2018 IPR022967 RNA-binding domain, S1 JV59_31725 f9af0e9980a77c8714ec565c7ad00021 278 SMART SM00316 69 132 2.6 T 14-10-2018 IPR022967 RNA-binding domain, S1 JV59_31725 f9af0e9980a77c8714ec565c7ad00021 278 SMART SM00316 3 64 4.3 T 14-10-2018 IPR022967 RNA-binding domain, S1 JV59_31725 f9af0e9980a77c8714ec565c7ad00021 278 Pfam PF13509 S1 domain 4 63 5.6E-21 T 14-10-2018 IPR039566 Conserved virulence factor B, S1 domain JV59_31725 f9af0e9980a77c8714ec565c7ad00021 278 Pfam PF13509 S1 domain 71 132 8.2E-5 T 14-10-2018 IPR039566 Conserved virulence factor B, S1 domain JV59_31725 f9af0e9980a77c8714ec565c7ad00021 278 PIRSF PIRSF012524 1 278 1.6E-100 T 14-10-2018 IPR014464 Conserved virulence factor B JV59_31725 f9af0e9980a77c8714ec565c7ad00021 278 Gene3D G3DSA:1.10.10.10 215 277 2.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_38230 38d8282a61d467c58984ad35543a42c4 195 Pfam PF04222 Protein of unknown function (DUF416) 6 194 4.2E-77 T 14-10-2018 IPR007338 Protein of unknown function DUF416 JV59_38230 38d8282a61d467c58984ad35543a42c4 195 Gene3D G3DSA:1.20.1590.10 3 195 5.2E-67 T 14-10-2018 IPR023381 YP001051499.1-like domain superfamily JV59_27645 5135dbd523ab5d6a6b8e13a6544312f3 147 Gene3D G3DSA:1.20.58.300 6 129 1.9E-21 T 14-10-2018 JV59_27645 5135dbd523ab5d6a6b8e13a6544312f3 147 Pfam PF05130 FlgN protein 8 120 2.2E-15 T 14-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 JV59_27645 5135dbd523ab5d6a6b8e13a6544312f3 147 SUPERFAMILY SSF140566 8 129 5.62E-24 T 14-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 JV59_05405 0c03cf666b0127757ea21cb2ace54af9 365 Gene3D G3DSA:3.40.50.11190 21 149 5.0E-7 T 14-10-2018 JV59_05405 0c03cf666b0127757ea21cb2ace54af9 365 Gene3D G3DSA:3.40.50.2000 158 291 5.7E-23 T 14-10-2018 JV59_05405 0c03cf666b0127757ea21cb2ace54af9 365 SUPERFAMILY SSF53756 86 347 6.28E-8 T 14-10-2018 JV59_16960 43ad76b9774e5edce258a8b5bf03ab5f 102 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 3 99 2.7E-25 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD JV59_16975 095bc3c93685a3ea21149fa0e9b0501e 212 Pfam PF01810 LysE type translocator 16 205 2.8E-28 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_16975 095bc3c93685a3ea21149fa0e9b0501e 212 PIRSF PIRSF006324 1 208 1.4E-53 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_31590 4ab6d13c194957552b72e93c3f968ce7 369 SUPERFAMILY SSF52096 212 367 7.85E-5 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JV59_29850 9614029486717a389234424806d8f744 494 PIRSF PIRSF006615 1 494 4.4E-197 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 JV59_29850 9614029486717a389234424806d8f744 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 261 280 1.2E-45 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 JV59_29850 9614029486717a389234424806d8f744 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 400 421 1.2E-45 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 JV59_29850 9614029486717a389234424806d8f744 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 330 349 1.2E-45 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 JV59_29850 9614029486717a389234424806d8f744 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 145 165 1.2E-45 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 JV59_29850 9614029486717a389234424806d8f744 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 241 260 1.2E-45 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 JV59_29850 9614029486717a389234424806d8f744 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 444 462 1.2E-45 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 JV59_29850 9614029486717a389234424806d8f744 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 288 304 1.2E-45 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 JV59_29850 9614029486717a389234424806d8f744 494 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 11 492 1.3E-96 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 JV59_29850 9614029486717a389234424806d8f744 494 Gene3D G3DSA:1.10.1370.30 1 494 2.4E-196 T 14-10-2018 JV59_29850 9614029486717a389234424806d8f744 494 SUPERFAMILY SSF55486 1 493 6.11E-116 T 14-10-2018 JV59_22665 6581803f3f6a6425a30f0117d530811c 166 Gene3D G3DSA:3.30.450.150 21 165 8.6E-40 T 14-10-2018 IPR038084 GlcG-like domain superfamily JV59_22665 6581803f3f6a6425a30f0117d530811c 166 SUPERFAMILY SSF143744 29 165 1.31E-33 T 14-10-2018 IPR038084 GlcG-like domain superfamily JV59_22665 6581803f3f6a6425a30f0117d530811c 166 Pfam PF03928 Haem-degrading 37 162 1.2E-26 T 14-10-2018 IPR005624 Haem-degrading JV59_32675 897a2ad4f8b0b44c9e281f0de07d7786 164 Gene3D G3DSA:3.40.630.30 1 163 3.5E-44 T 14-10-2018 JV59_32675 897a2ad4f8b0b44c9e281f0de07d7786 164 SUPERFAMILY SSF55729 1 163 1.25E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_32675 897a2ad4f8b0b44c9e281f0de07d7786 164 Pfam PF13420 Acetyltransferase (GNAT) domain 3 158 9.8E-23 T 14-10-2018 JV59_17615 71b26be2045109ac1202e023ebd439e4 322 SMART SM00327 84 285 6.0E-18 T 14-10-2018 IPR002035 von Willebrand factor, type A JV59_17615 71b26be2045109ac1202e023ebd439e4 322 SUPERFAMILY SSF53300 82 281 2.37E-36 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JV59_17615 71b26be2045109ac1202e023ebd439e4 322 Gene3D G3DSA:3.40.50.410 83 285 8.8E-58 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JV59_17615 71b26be2045109ac1202e023ebd439e4 322 Pfam PF00092 von Willebrand factor type A domain 86 278 2.1E-32 T 14-10-2018 IPR002035 von Willebrand factor, type A JV59_25365 faf4c4ef34a15d87388a1851d7e1cdd6 306 Pfam PF13289 SIR2-like domain 114 241 1.3E-17 T 14-10-2018 IPR039444 SIR2-like domain JV59_25365 faf4c4ef34a15d87388a1851d7e1cdd6 306 SUPERFAMILY SSF52467 20 214 4.9E-7 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JV59_30930 43553e8a45230eed99b4af7a478c8382 102 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 10 100 5.2E-11 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD JV59_28130 50d48663fe2def16f8aa088fa4097b07 333 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 1.2E-100 T 14-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 JV59_28130 50d48663fe2def16f8aa088fa4097b07 333 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 46.226 T 14-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 JV59_21870 9bafa0e63ba37a638f365abada30e05a 104 Gene3D G3DSA:3.30.70.100 1 103 3.1E-9 T 14-10-2018 JV59_21870 9bafa0e63ba37a638f365abada30e05a 104 Pfam PF07978 NIPSNAP 5 95 2.6E-6 T 14-10-2018 IPR012577 NIPSNAP JV59_21870 9bafa0e63ba37a638f365abada30e05a 104 SUPERFAMILY SSF54909 3 99 3.16E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_20645 eed03516afbb50adbfc7127908777688 465 Pfam PF00128 Alpha amylase, catalytic domain 47 232 3.3E-16 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_20645 eed03516afbb50adbfc7127908777688 465 SUPERFAMILY SSF51445 31 409 2.54E-61 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily JV59_20645 eed03516afbb50adbfc7127908777688 465 Gene3D G3DSA:3.20.20.80 20 386 2.3E-83 T 14-10-2018 JV59_20645 eed03516afbb50adbfc7127908777688 465 PRINTS PR00110 Alpha-amylase signature 239 257 1.9E-15 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 JV59_20645 eed03516afbb50adbfc7127908777688 465 PRINTS PR00110 Alpha-amylase signature 210 221 1.9E-15 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 JV59_20645 eed03516afbb50adbfc7127908777688 465 PRINTS PR00110 Alpha-amylase signature 64 81 1.9E-15 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 JV59_20645 eed03516afbb50adbfc7127908777688 465 PRINTS PR00110 Alpha-amylase signature 305 317 1.9E-15 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 JV59_20645 eed03516afbb50adbfc7127908777688 465 PRINTS PR00110 Alpha-amylase signature 97 108 1.9E-15 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 JV59_20645 eed03516afbb50adbfc7127908777688 465 SUPERFAMILY SSF51011 401 463 3.18E-7 T 14-10-2018 JV59_20645 eed03516afbb50adbfc7127908777688 465 SMART SM00642 23 381 1.4E-41 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JV59_36110 c93ec62d514f45563ba9948bb36ee79c 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JV59_36110 c93ec62d514f45563ba9948bb36ee79c 84 Gene3D G3DSA:3.30.70.20 2 83 7.2E-34 T 14-10-2018 JV59_36110 c93ec62d514f45563ba9948bb36ee79c 84 SUPERFAMILY SSF54862 4 71 3.93E-17 T 14-10-2018 JV59_36110 c93ec62d514f45563ba9948bb36ee79c 84 Pfam PF00037 4Fe-4S binding domain 5 25 5.8E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JV59_23250 0e63a4a3a4f6d98cdc2557ef12e1bd3a 160 Gene3D G3DSA:3.30.450.150 16 159 1.2E-33 T 14-10-2018 IPR038084 GlcG-like domain superfamily JV59_23250 0e63a4a3a4f6d98cdc2557ef12e1bd3a 160 SUPERFAMILY SSF143744 25 158 2.22E-28 T 14-10-2018 IPR038084 GlcG-like domain superfamily JV59_23250 0e63a4a3a4f6d98cdc2557ef12e1bd3a 160 Pfam PF03928 Haem-degrading 32 155 1.5E-23 T 14-10-2018 IPR005624 Haem-degrading JV59_21415 e21c7453ec022313d043f00c2ef87000 141 Pfam PF03733 Inner membrane component domain 4 54 3.2E-14 T 14-10-2018 IPR005185 Inner membrane component domain JV59_21415 e21c7453ec022313d043f00c2ef87000 141 Pfam PF03733 Inner membrane component domain 76 126 9.4E-19 T 14-10-2018 IPR005185 Inner membrane component domain JV59_21415 e21c7453ec022313d043f00c2ef87000 141 PIRSF PIRSF028777 1 138 3.5E-52 T 14-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 JV59_26275 20eac58abfef3568c08d9e3f196770df 373 PIRSF PIRSF000524 5 373 1.4E-109 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 JV59_26275 20eac58abfef3568c08d9e3f196770df 373 Gene3D G3DSA:3.90.1150.10 9 369 1.3E-142 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_26275 20eac58abfef3568c08d9e3f196770df 373 Pfam PF00266 Aminotransferase class-V 13 341 3.8E-35 T 14-10-2018 IPR000192 Aminotransferase class V domain JV59_26275 20eac58abfef3568c08d9e3f196770df 373 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site JV59_26275 20eac58abfef3568c08d9e3f196770df 373 Gene3D G3DSA:3.40.640.10 22 270 1.3E-142 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_26275 20eac58abfef3568c08d9e3f196770df 373 SUPERFAMILY SSF53383 9 371 4.89E-100 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_40145 4c471b7cecb3907e67270e0f46901740 135 Pfam PF03748 Flagellar basal body-associated protein FliL 33 135 1.1E-18 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 JV59_21000 d2ba80ddfbe93a6076e145c25bf3d2c7 197 Gene3D G3DSA:3.40.50.360 1 190 1.2E-32 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_21000 d2ba80ddfbe93a6076e145c25bf3d2c7 197 Pfam PF03358 NADPH-dependent FMN reductase 1 144 5.4E-25 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 JV59_21000 d2ba80ddfbe93a6076e145c25bf3d2c7 197 SUPERFAMILY SSF52218 1 166 1.71E-31 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_30690 bea5b67a47c5a676fc8f3fa61d47d378 398 Gene3D G3DSA:3.40.50.2000 201 368 1.2E-16 T 14-10-2018 JV59_30690 bea5b67a47c5a676fc8f3fa61d47d378 398 Pfam PF00534 Glycosyl transferases group 1 270 358 9.2E-9 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 JV59_30690 bea5b67a47c5a676fc8f3fa61d47d378 398 SUPERFAMILY SSF53756 19 371 4.71E-25 T 14-10-2018 JV59_00140 4d81ba7dbdc56b8495a8c26a3a3d922e 165 PIRSF PIRSF034445 1 158 4.5E-19 T 14-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 JV59_00140 4d81ba7dbdc56b8495a8c26a3a3d922e 165 Pfam PF07813 LTXXQ motif family protein 42 146 3.6E-21 T 14-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 JV59_00140 4d81ba7dbdc56b8495a8c26a3a3d922e 165 Gene3D G3DSA:1.20.120.1490 40 161 6.6E-28 T 14-10-2018 JV59_20655 f05b0daf0cbc7761545bdaba30f50ead 215 Gene3D G3DSA:1.10.150.240 16 84 5.0E-50 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JV59_20655 f05b0daf0cbc7761545bdaba30f50ead 215 SUPERFAMILY SSF56784 1 212 4.96E-50 T 14-10-2018 IPR036412 HAD-like superfamily JV59_20655 f05b0daf0cbc7761545bdaba30f50ead 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 1.8E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_20655 f05b0daf0cbc7761545bdaba30f50ead 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.8E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_20655 f05b0daf0cbc7761545bdaba30f50ead 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 1.8E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_20655 f05b0daf0cbc7761545bdaba30f50ead 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 1.8E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_20655 f05b0daf0cbc7761545bdaba30f50ead 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 80 183 1.5E-15 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JV59_20655 f05b0daf0cbc7761545bdaba30f50ead 215 Gene3D G3DSA:3.40.50.1000 4 190 5.0E-50 T 14-10-2018 IPR023214 HAD superfamily JV59_20655 f05b0daf0cbc7761545bdaba30f50ead 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 182 1.9E-32 T 14-10-2018 JV59_40260 619744a1bd8f4125068e96c464863d0e 3551 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3425 3443 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site JV59_40260 619744a1bd8f4125068e96c464863d0e 3551 SUPERFAMILY SSF51120 3381 3476 2.75E-20 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal JV59_40260 619744a1bd8f4125068e96c464863d0e 3551 PRINTS PR00313 NodO calcium binding signature 3429 3437 3.3E-9 T 14-10-2018 JV59_40260 619744a1bd8f4125068e96c464863d0e 3551 PRINTS PR00313 NodO calcium binding signature 3438 3447 3.3E-9 T 14-10-2018 JV59_40260 619744a1bd8f4125068e96c464863d0e 3551 PRINTS PR00313 NodO calcium binding signature 3408 3419 3.3E-9 T 14-10-2018 JV59_40260 619744a1bd8f4125068e96c464863d0e 3551 PRINTS PR00313 NodO calcium binding signature 3420 3428 3.3E-9 T 14-10-2018 JV59_40260 619744a1bd8f4125068e96c464863d0e 3551 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3407 3425 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site JV59_40260 619744a1bd8f4125068e96c464863d0e 3551 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 3456 3546 4.8E-10 T 14-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass JV59_40260 619744a1bd8f4125068e96c464863d0e 3551 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 807 946 1.9E-44 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain JV59_40260 619744a1bd8f4125068e96c464863d0e 3551 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 663 803 1.2E-43 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain JV59_40260 619744a1bd8f4125068e96c464863d0e 3551 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 502 661 1.0E-29 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain JV59_40260 619744a1bd8f4125068e96c464863d0e 3551 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 953 1095 5.1E-39 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain JV59_40260 619744a1bd8f4125068e96c464863d0e 3551 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1098 1229 2.9E-35 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain JV59_40260 619744a1bd8f4125068e96c464863d0e 3551 Gene3D G3DSA:2.150.10.10 3384 3536 5.8E-22 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal JV59_40260 619744a1bd8f4125068e96c464863d0e 3551 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3416 3434 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site JV59_31035 b7359125764d921b17d0ee16f40fb2a5 406 SUPERFAMILY SSF111352 17 384 4.84E-97 T 14-10-2018 JV59_31035 b7359125764d921b17d0ee16f40fb2a5 406 Pfam PF00909 Ammonium Transporter Family 23 399 2.4E-90 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 JV59_31035 b7359125764d921b17d0ee16f40fb2a5 406 Gene3D G3DSA:1.10.3430.10 2 406 8.5E-104 T 14-10-2018 IPR029020 Ammonium/urea transporter JV59_31035 b7359125764d921b17d0ee16f40fb2a5 406 ProSitePatterns PS01219 Ammonium transporters signature. 167 192 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 JV59_22190 c0e807e7adff36b84055bbc6c881e0da 412 Pfam PF07690 Major Facilitator Superfamily 225 407 1.7E-8 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_22190 c0e807e7adff36b84055bbc6c881e0da 412 Gene3D G3DSA:1.20.1250.20 3 189 3.0E-9 T 14-10-2018 JV59_22190 c0e807e7adff36b84055bbc6c881e0da 412 SUPERFAMILY SSF103473 10 400 3.53E-27 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_22190 c0e807e7adff36b84055bbc6c881e0da 412 Gene3D G3DSA:1.20.1250.20 218 411 6.2E-10 T 14-10-2018 JV59_22890 7585bc0abc0057a0031c1e118ed3ad48 231 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 231 2.1E-99 T 14-10-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE JV59_22890 7585bc0abc0057a0031c1e118ed3ad48 231 SUPERFAMILY SSF52540 2 222 2.92E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_22890 7585bc0abc0057a0031c1e118ed3ad48 231 Pfam PF00005 ABC transporter 19 160 2.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_22890 7585bc0abc0057a0031c1e118ed3ad48 231 Gene3D G3DSA:3.40.50.300 1 231 2.5E-56 T 14-10-2018 JV59_22890 7585bc0abc0057a0031c1e118ed3ad48 231 SMART SM00382 26 210 8.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_17945 779f7670b9a2f32fca54c8c9ead8ae41 216 SUPERFAMILY SSF52317 1 215 8.46E-57 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_17945 779f7670b9a2f32fca54c8c9ead8ae41 216 Gene3D G3DSA:3.40.50.880 1 216 6.7E-86 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_17945 779f7670b9a2f32fca54c8c9ead8ae41 216 PIRSF PIRSF006320 1 216 3.8E-106 T 14-10-2018 IPR026041 Glyoxalase ElbB JV59_35430 b4287ad23217760532bf07cda7896867 316 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 56 9.6E-18 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain JV59_35430 b4287ad23217760532bf07cda7896867 316 SUPERFAMILY SSF103088 182 298 5.23E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_35430 b4287ad23217760532bf07cda7896867 316 Pfam PF00691 OmpA family 194 292 5.1E-18 T 14-10-2018 IPR006665 OmpA-like domain JV59_35430 b4287ad23217760532bf07cda7896867 316 Gene3D G3DSA:3.30.1330.60 152 300 7.4E-52 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_01505 fb44450a6655246eb253a918152eef96 556 Gene3D G3DSA:3.30.750.24 427 550 8.8E-16 T 14-10-2018 IPR036513 STAS domain superfamily JV59_01505 fb44450a6655246eb253a918152eef96 556 SUPERFAMILY SSF52091 439 541 4.32E-12 T 14-10-2018 IPR036513 STAS domain superfamily JV59_01505 fb44450a6655246eb253a918152eef96 556 Pfam PF00916 Sulfate permease family 12 376 4.1E-84 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 JV59_01505 fb44450a6655246eb253a918152eef96 556 Pfam PF01740 STAS domain 439 533 3.1E-13 T 14-10-2018 IPR002645 STAS domain JV59_23605 65380e0b85d3cbdb9bdf4019b0b1efb7 462 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 43 461 8.3E-113 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 JV59_23605 65380e0b85d3cbdb9bdf4019b0b1efb7 462 Pfam PF00939 Sodium:sulfate symporter transmembrane region 47 461 1.6E-58 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 JV59_23605 65380e0b85d3cbdb9bdf4019b0b1efb7 462 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 411 427 - T 14-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 JV59_27260 16ed3463dfc7433d64d5c31adcfd23f3 378 Gene3D G3DSA:2.40.160.10 35 378 3.7E-35 T 14-10-2018 IPR023614 Porin domain superfamily JV59_27260 16ed3463dfc7433d64d5c31adcfd23f3 378 SUPERFAMILY SSF56935 38 378 2.41E-30 T 14-10-2018 JV59_00715 309185a9aaf8d60c945081229143044d 166 Gene3D G3DSA:3.30.700.10 9 166 1.4E-6 T 14-10-2018 JV59_00715 309185a9aaf8d60c945081229143044d 166 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 27 2.9E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_00715 309185a9aaf8d60c945081229143044d 166 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 2.9E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_00715 309185a9aaf8d60c945081229143044d 166 SUPERFAMILY SSF54523 9 117 4.32E-9 T 14-10-2018 JV59_27900 1fdfd85f237b5d1948787f673875f3ad 81 SUPERFAMILY SSF54285 1 81 2.06E-22 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp JV59_27900 1fdfd85f237b5d1948787f673875f3ad 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 1.5E-23 T 14-10-2018 JV59_27900 1fdfd85f237b5d1948787f673875f3ad 81 Gene3D G3DSA:3.10.20.30 1 81 3.2E-25 T 14-10-2018 IPR012675 Beta-grasp domain superfamily JV59_27900 1fdfd85f237b5d1948787f673875f3ad 81 Pfam PF02597 ThiS family 4 81 1.1E-22 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 JV59_22840 e6c575cb75b75c7db4483576ce348f34 149 Pfam PF00583 Acetyltransferase (GNAT) family 34 138 1.5E-19 T 14-10-2018 IPR000182 GNAT domain JV59_22840 e6c575cb75b75c7db4483576ce348f34 149 SUPERFAMILY SSF55729 1 143 4.82E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_22840 e6c575cb75b75c7db4483576ce348f34 149 Gene3D G3DSA:3.40.630.30 1 149 1.1E-37 T 14-10-2018 JV59_27925 d47b7aa0e2ddc091a4470d323fada901 488 PIRSF PIRSF006603 1 447 2.7E-79 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_27925 d47b7aa0e2ddc091a4470d323fada901 488 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 413 8.8E-60 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_27925 d47b7aa0e2ddc091a4470d323fada901 488 Pfam PF01554 MatE 29 184 2.9E-25 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_27925 d47b7aa0e2ddc091a4470d323fada901 488 Pfam PF01554 MatE 243 403 5.1E-20 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_35170 e605b2b7b9e6cce79abab263d19313fc 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.2E-31 T 14-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 JV59_35170 e605b2b7b9e6cce79abab263d19313fc 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.1E-26 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JV59_35170 e605b2b7b9e6cce79abab263d19313fc 89 PIRSF PIRSF004669 1 89 8.9E-29 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JV59_35170 e605b2b7b9e6cce79abab263d19313fc 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.1E-16 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JV59_35170 e605b2b7b9e6cce79abab263d19313fc 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.1E-16 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JV59_35170 e605b2b7b9e6cce79abab263d19313fc 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.1E-16 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JV59_27770 33de33ac010292c53b6355888b745c84 268 SUPERFAMILY SSF141868 30 257 1.31E-6 T 14-10-2018 IPR035919 EAL domain superfamily JV59_28125 00e0f3f02247fa924a5d462c13d94447 74 SUPERFAMILY SSF158651 1 72 3.01E-29 T 14-10-2018 IPR023202 YejL-like superfamily JV59_28125 00e0f3f02247fa924a5d462c13d94447 74 PIRSF PIRSF006188 1 72 3.2E-34 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 JV59_28125 00e0f3f02247fa924a5d462c13d94447 74 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 22.873 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 JV59_28125 00e0f3f02247fa924a5d462c13d94447 74 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 1.0E-26 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 JV59_28125 00e0f3f02247fa924a5d462c13d94447 74 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 7.3E-20 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 JV59_28125 00e0f3f02247fa924a5d462c13d94447 74 Gene3D G3DSA:1.10.3390.10 1 74 1.4E-30 T 14-10-2018 IPR023202 YejL-like superfamily JV59_25690 f67850f71616f761d8debfde9da71540 399 Pfam PF03222 Tryptophan/tyrosine permease family 13 373 1.7E-34 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 JV59_25690 f67850f71616f761d8debfde9da71540 399 PRINTS PR00166 Aromatic amino acid permease signature 236 255 1.3E-23 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_25690 f67850f71616f761d8debfde9da71540 399 PRINTS PR00166 Aromatic amino acid permease signature 328 346 1.3E-23 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_25690 f67850f71616f761d8debfde9da71540 399 PRINTS PR00166 Aromatic amino acid permease signature 295 314 1.3E-23 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_25690 f67850f71616f761d8debfde9da71540 399 PRINTS PR00166 Aromatic amino acid permease signature 155 175 1.3E-23 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_25690 f67850f71616f761d8debfde9da71540 399 PRINTS PR00166 Aromatic amino acid permease signature 21 44 1.3E-23 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_25690 f67850f71616f761d8debfde9da71540 399 PRINTS PR00166 Aromatic amino acid permease signature 93 113 1.3E-23 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_25690 f67850f71616f761d8debfde9da71540 399 PRINTS PR00166 Aromatic amino acid permease signature 48 67 1.3E-23 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_26985 f7c95d07fb59eb6d3bfea361927bacf6 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 3.9E-7 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26985 f7c95d07fb59eb6d3bfea361927bacf6 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26985 f7c95d07fb59eb6d3bfea361927bacf6 41 SUPERFAMILY SSF57840 5 40 1.44E-13 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26985 f7c95d07fb59eb6d3bfea361927bacf6 41 Pfam PF00444 Ribosomal protein L36 1 40 4.6E-16 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26985 f7c95d07fb59eb6d3bfea361927bacf6 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 15.88 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_28530 0079ad21dd1a0e313f89c2a2536d047c 59 Pfam PF06796 Periplasmic nitrate reductase protein NapE 5 55 3.1E-25 T 14-10-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE JV59_28530 0079ad21dd1a0e313f89c2a2536d047c 59 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 8 57 3.7E-29 T 14-10-2018 IPR014316 Trimethylamine N-oxide reductase system, TorE JV59_24270 928d0b81c06f7077186e93c03a88b472 290 Pfam PF13460 NAD(P)H-binding 11 195 1.9E-20 T 14-10-2018 IPR016040 NAD(P)-binding domain JV59_24270 928d0b81c06f7077186e93c03a88b472 290 Gene3D G3DSA:3.40.50.720 1 226 1.2E-37 T 14-10-2018 JV59_24270 928d0b81c06f7077186e93c03a88b472 290 SUPERFAMILY SSF51735 1 267 5.14E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_38575 400ef231a388df757d45f43d8a370d9e 389 Pfam PF04932 O-Antigen ligase 179 326 1.9E-20 T 14-10-2018 IPR007016 O-antigen ligase-related JV59_01915 0193180f289e12b7d7fa64f324926efb 272 SUPERFAMILY SSF56300 12 267 6.19E-58 T 14-10-2018 JV59_01915 0193180f289e12b7d7fa64f324926efb 272 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 12 258 39.162 T 14-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 JV59_01915 0193180f289e12b7d7fa64f324926efb 272 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 203 258 6.0E-19 T 14-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 JV59_01915 0193180f289e12b7d7fa64f324926efb 272 Gene3D G3DSA:3.60.21.10 3 261 1.0E-67 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JV59_01915 0193180f289e12b7d7fa64f324926efb 272 Pfam PF00149 Calcineurin-like phosphoesterase 13 204 3.3E-17 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 JV59_22820 d9a53ca75866c65746cbd35277e6647a 511 SMART SM00304 180 234 0.0019 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_22820 d9a53ca75866c65746cbd35277e6647a 511 SMART SM00283 249 510 1.6E-50 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_22820 d9a53ca75866c65746cbd35277e6647a 511 Gene3D G3DSA:1.10.287.950 180 511 8.7E-65 T 14-10-2018 JV59_22820 d9a53ca75866c65746cbd35277e6647a 511 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 316 476 5.6E-36 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_22820 d9a53ca75866c65746cbd35277e6647a 511 SUPERFAMILY SSF58104 202 510 3.14E-61 T 14-10-2018 JV59_10565 9dedba2c357fe8dd66407fd38fc19387 307 SUPERFAMILY SSF161098 68 294 1.18E-45 T 14-10-2018 IPR035906 MetI-like superfamily JV59_10565 9dedba2c357fe8dd66407fd38fc19387 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 295 2.5E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_10565 9dedba2c357fe8dd66407fd38fc19387 307 Gene3D G3DSA:1.10.3720.10 64 305 2.9E-54 T 14-10-2018 IPR035906 MetI-like superfamily JV59_31480 6fd13c82f1cf802bdb08ace53173cb24 227 Gene3D G3DSA:3.40.50.300 11 208 2.8E-29 T 14-10-2018 JV59_31480 6fd13c82f1cf802bdb08ace53173cb24 227 Pfam PF01935 Domain of unknown function DUF87 15 89 2.3E-6 T 14-10-2018 IPR002789 Helicase HerA, central domain JV59_31480 6fd13c82f1cf802bdb08ace53173cb24 227 SUPERFAMILY SSF52540 14 193 1.6E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_26490 14c579430dc01418d82a482965eb2fce 140 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 136 1.2E-48 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 JV59_26490 14c579430dc01418d82a482965eb2fce 140 Pfam PF03652 Holliday junction resolvase 4 136 1.7E-35 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 JV59_26490 14c579430dc01418d82a482965eb2fce 140 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 139 24.404 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 JV59_26490 14c579430dc01418d82a482965eb2fce 140 SUPERFAMILY SSF53098 3 137 7.13E-37 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JV59_26490 14c579430dc01418d82a482965eb2fce 140 Gene3D G3DSA:3.30.420.140 1 139 1.2E-38 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 JV59_26490 14c579430dc01418d82a482965eb2fce 140 SMART SM00732 3 104 9.5E-35 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 JV59_09545 78778bf0b092b14655661a7363a4727e 221 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 40 204 8.1E-9 T 14-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 JV59_28850 6b7ce8a2cf4005f9d54f90f120f2330f 139 Gene3D G3DSA:3.10.450.50 4 124 3.3E-23 T 14-10-2018 JV59_28850 6b7ce8a2cf4005f9d54f90f120f2330f 139 Pfam PF12680 SnoaL-like domain 9 108 3.4E-12 T 14-10-2018 IPR037401 SnoaL-like domain JV59_28850 6b7ce8a2cf4005f9d54f90f120f2330f 139 SUPERFAMILY SSF54427 3 129 1.86E-23 T 14-10-2018 IPR032710 NTF2-like domain superfamily JV59_32005 737caba2d3c1702c2c92811f33b97bb0 475 SUPERFAMILY SSF56954 4 455 1.7E-65 T 14-10-2018 JV59_32005 737caba2d3c1702c2c92811f33b97bb0 475 Pfam PF02321 Outer membrane efflux protein 275 455 2.1E-26 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 JV59_32005 737caba2d3c1702c2c92811f33b97bb0 475 Pfam PF02321 Outer membrane efflux protein 28 252 3.5E-22 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 JV59_24545 135b80e3b5711407ce092d8a73de060b 127 Pfam PF07007 Lysozyme inhibitor LprI 34 123 2.1E-14 T 14-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal JV59_24545 135b80e3b5711407ce092d8a73de060b 127 Gene3D G3DSA:1.20.1270.180 26 126 5.9E-15 T 14-10-2018 JV59_26080 132d00b93517c0b85a7588fc649a837f 75 Gene3D G3DSA:1.20.5.300 2 52 3.9E-6 T 14-10-2018 JV59_26080 132d00b93517c0b85a7588fc649a837f 75 Pfam PF04102 SlyX 9 75 5.8E-23 T 14-10-2018 IPR007236 SlyX JV59_26080 132d00b93517c0b85a7588fc649a837f 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 17.443 T 14-10-2018 IPR007236 SlyX JV59_16250 f39e6385d9b3e52236c92f936b04cdf6 405 Pfam PF07690 Major Facilitator Superfamily 23 357 1.1E-27 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_16250 f39e6385d9b3e52236c92f936b04cdf6 405 SUPERFAMILY SSF103473 13 400 7.46E-40 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_16250 f39e6385d9b3e52236c92f936b04cdf6 405 Gene3D G3DSA:1.20.1250.20 12 399 5.7E-34 T 14-10-2018 JV59_27825 24b817bd52452e870a99627200e64754 582 Pfam PF08345 Flagellar M-ring protein C-terminal 276 430 9.0E-39 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal JV59_27825 24b817bd52452e870a99627200e64754 582 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 37 571 1.3E-74 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JV59_27825 24b817bd52452e870a99627200e64754 582 Pfam PF01514 Secretory protein of YscJ/FliF family 51 242 5.0E-65 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF JV59_27825 24b817bd52452e870a99627200e64754 582 PRINTS PR01009 Flagellar M-ring protein signature 142 160 6.3E-28 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JV59_27825 24b817bd52452e870a99627200e64754 582 PRINTS PR01009 Flagellar M-ring protein signature 218 236 6.3E-28 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JV59_27825 24b817bd52452e870a99627200e64754 582 PRINTS PR01009 Flagellar M-ring protein signature 174 188 6.3E-28 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JV59_27825 24b817bd52452e870a99627200e64754 582 PRINTS PR01009 Flagellar M-ring protein signature 289 307 6.3E-28 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JV59_27825 24b817bd52452e870a99627200e64754 582 PRINTS PR01009 Flagellar M-ring protein signature 360 384 6.3E-28 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JV59_27825 24b817bd52452e870a99627200e64754 582 Gene3D G3DSA:3.30.300.30 140 242 7.4E-13 T 14-10-2018 JV59_27825 24b817bd52452e870a99627200e64754 582 PIRSF PIRSF004862 23 573 3.9E-130 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JV59_24145 216c826bfff12ecce89626f230055bb7 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 407 23.79 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 JV59_24145 216c826bfff12ecce89626f230055bb7 408 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 11 407 6.2E-135 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 JV59_24145 216c826bfff12ecce89626f230055bb7 408 Pfam PF03616 Sodium/glutamate symporter 8 376 6.3E-152 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 JV59_08280 28e25c2794af2704aeb0f7787482089b 227 Pfam PF10979 Protein of unknown function (DUF2786) 5 42 2.7E-12 T 14-10-2018 IPR024498 Domain of unknown function DUF2786 JV59_08280 28e25c2794af2704aeb0f7787482089b 227 PIRSF PIRSF028111 1 227 4.4E-81 T 14-10-2018 IPR016868 Bacteriophage B3, Orf5 JV59_32125 ccd1d4b33f6190a65a3cee81742c5290 331 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 3 329 30.048 T 14-10-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 JV59_32125 ccd1d4b33f6190a65a3cee81742c5290 331 Gene3D G3DSA:1.10.3470.10 4 328 7.4E-95 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JV59_32125 ccd1d4b33f6190a65a3cee81742c5290 331 Pfam PF01032 FecCD transport family 22 326 5.0E-83 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 JV59_32125 ccd1d4b33f6190a65a3cee81742c5290 331 SUPERFAMILY SSF81345 6 326 2.75E-80 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JV59_18090 ff91e1e9e8aba4d935252106e9db3289 180 Pfam PF13505 Outer membrane protein beta-barrel domain 24 180 4.0E-9 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel JV59_18090 ff91e1e9e8aba4d935252106e9db3289 180 SUPERFAMILY SSF56925 30 180 1.7E-7 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JV59_30795 7f0c5264cefe4601af022a532385549d 157 Pfam PF13673 Acetyltransferase (GNAT) domain 38 137 6.3E-19 T 14-10-2018 IPR000182 GNAT domain JV59_30795 7f0c5264cefe4601af022a532385549d 157 SUPERFAMILY SSF55729 1 157 4.75E-32 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_30795 7f0c5264cefe4601af022a532385549d 157 Gene3D G3DSA:3.40.630.30 1 157 5.6E-33 T 14-10-2018 JV59_26680 1e4a5fa505bd5e9bccfd68f779f37211 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 2.4E-68 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA JV59_26680 1e4a5fa505bd5e9bccfd68f779f37211 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 40.457 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA JV59_26680 1e4a5fa505bd5e9bccfd68f779f37211 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site JV59_26680 1e4a5fa505bd5e9bccfd68f779f37211 125 Gene3D G3DSA:3.20.70.20 9 125 5.5E-25 T 14-10-2018 JV59_26680 1e4a5fa505bd5e9bccfd68f779f37211 125 SUPERFAMILY SSF51998 64 124 3.62E-23 T 14-10-2018 JV59_26680 1e4a5fa505bd5e9bccfd68f779f37211 125 Pfam PF01228 Glycine radical 14 106 3.9E-23 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 JV59_26680 1e4a5fa505bd5e9bccfd68f779f37211 125 PIRSF PIRSF000378 2 125 1.3E-53 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA JV59_30180 31775aa2a3df7b48fe83df707d23235a 132 Gene3D G3DSA:3.10.450.40 70 122 4.5E-6 T 14-10-2018 JV59_39105 ec3ef22250824bd1f064bfa7178b5ef1 265 Pfam PF07070 SpoOM protein 4 221 2.1E-75 T 14-10-2018 IPR009776 Sporulation stage 0, protein M JV59_24345 90507242dfd10711cff401d287b860b4 116 Pfam PF07883 Cupin domain 43 111 1.2E-14 T 14-10-2018 IPR013096 Cupin 2, conserved barrel JV59_24345 90507242dfd10711cff401d287b860b4 116 Gene3D G3DSA:2.60.120.10 3 112 9.4E-25 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_24345 90507242dfd10711cff401d287b860b4 116 SUPERFAMILY SSF51182 16 114 2.24E-19 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JV59_35360 6fa893664f794e199fe05bebbfa3e427 227 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 25 177 7.4E-37 T 14-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 JV59_35360 6fa893664f794e199fe05bebbfa3e427 227 SUPERFAMILY SSF55166 19 175 1.62E-19 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JV59_35360 6fa893664f794e199fe05bebbfa3e427 227 Gene3D G3DSA:3.30.1380.10 3 195 6.6E-36 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JV59_20365 18f740f1d1e8cf6460b40c13f0d6a2fc 294 SUPERFAMILY SSF53850 90 290 1.43E-48 T 14-10-2018 JV59_20365 18f740f1d1e8cf6460b40c13f0d6a2fc 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 3.6E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_20365 18f740f1d1e8cf6460b40c13f0d6a2fc 294 SUPERFAMILY SSF46785 3 87 5.94E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_20365 18f740f1d1e8cf6460b40c13f0d6a2fc 294 Gene3D G3DSA:1.10.10.10 3 91 1.2E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_20365 18f740f1d1e8cf6460b40c13f0d6a2fc 294 Gene3D G3DSA:3.40.190.10 163 259 4.9E-69 T 14-10-2018 JV59_20365 18f740f1d1e8cf6460b40c13f0d6a2fc 294 Gene3D G3DSA:3.40.190.10 92 286 4.9E-69 T 14-10-2018 JV59_20365 18f740f1d1e8cf6460b40c13f0d6a2fc 294 Pfam PF03466 LysR substrate binding domain 89 288 3.8E-48 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_25470 55e1c342019875b36b79c2f73de81fe4 1747 Pfam PF12920 TcdA/TcdB pore forming domain 442 1109 3.9E-201 T 14-10-2018 IPR024769 TcdA/TcdB toxin, pore forming domain GO:0009405 JV59_33050 2177ff8c63153e198488b86ede6e9000 417 Pfam PF03222 Tryptophan/tyrosine permease family 29 381 6.5E-18 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 JV59_26750 4600f89af5eab49470b04199d7e3ffd6 189 Gene3D G3DSA:2.30.130.40 1 109 1.0E-25 T 14-10-2018 JV59_26750 4600f89af5eab49470b04199d7e3ffd6 189 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 143 5.5E-16 T 14-10-2018 IPR003111 Lon, substrate-binding domain JV59_26750 4600f89af5eab49470b04199d7e3ffd6 189 Gene3D G3DSA:1.10.4060.10 113 189 4.9E-5 T 14-10-2018 JV59_26750 4600f89af5eab49470b04199d7e3ffd6 189 SUPERFAMILY SSF88697 3 188 2.41E-44 T 14-10-2018 IPR015947 PUA-like superfamily JV59_26750 4600f89af5eab49470b04199d7e3ffd6 189 SMART SM00464 3 185 2.9E-4 T 14-10-2018 IPR003111 Lon, substrate-binding domain JV59_18815 fcb52e4c209fd94d31f21dd6faf61696 137 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 118 1.5E-17 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 JV59_18815 fcb52e4c209fd94d31f21dd6faf61696 137 Gene3D G3DSA:2.170.150.70 5 118 1.8E-10 T 14-10-2018 JV59_18815 fcb52e4c209fd94d31f21dd6faf61696 137 SUPERFAMILY SSF51316 2 137 3.14E-33 T 14-10-2018 IPR011057 Mss4-like superfamily JV59_25140 4c04c9c51310de445f035e7f9e57d1dd 320 Pfam PF06834 TraU protein 14 318 4.2E-104 T 14-10-2018 IPR009649 TraU JV59_16405 3038d6a818d34a2b390424611cccce9b 265 Gene3D G3DSA:1.10.3720.10 47 260 2.0E-54 T 14-10-2018 IPR035906 MetI-like superfamily JV59_16405 3038d6a818d34a2b390424611cccce9b 265 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 59 153 3.8E-26 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 JV59_16405 3038d6a818d34a2b390424611cccce9b 265 SUPERFAMILY SSF161098 59 245 1.26E-45 T 14-10-2018 IPR035906 MetI-like superfamily JV59_16405 3038d6a818d34a2b390424611cccce9b 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 258 3.8E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_40015 a18a55b5fbfcb3d2015cd71cd64abdca 199 Pfam PF03942 DTW domain 7 187 3.8E-44 T 14-10-2018 IPR005636 DTW JV59_40015 a18a55b5fbfcb3d2015cd71cd64abdca 199 SMART SM01144 3 194 1.3E-48 T 14-10-2018 IPR005636 DTW JV59_20595 370d9111183e2cbc95b69b31c2d23fca 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 249 1.6E-24 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_20595 370d9111183e2cbc95b69b31c2d23fca 254 SUPERFAMILY SSF53850 27 248 5.52E-36 T 14-10-2018 JV59_20595 370d9111183e2cbc95b69b31c2d23fca 254 Gene3D G3DSA:3.40.190.10 107 208 8.1E-28 T 14-10-2018 JV59_20595 370d9111183e2cbc95b69b31c2d23fca 254 Gene3D G3DSA:3.40.190.10 29 245 8.1E-28 T 14-10-2018 JV59_20595 370d9111183e2cbc95b69b31c2d23fca 254 SMART SM00062 23 251 2.1E-14 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_01565 035f2421d37658ac7aef1d30866f0ef7 763 Gene3D G3DSA:3.10.20.310 333 420 4.3E-8 T 14-10-2018 JV59_01565 035f2421d37658ac7aef1d30866f0ef7 763 Pfam PF01734 Patatin-like phospholipase 37 227 3.5E-27 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 JV59_01565 035f2421d37658ac7aef1d30866f0ef7 763 Gene3D G3DSA:3.40.1090.10 144 283 7.9E-18 T 14-10-2018 JV59_01565 035f2421d37658ac7aef1d30866f0ef7 763 Gene3D G3DSA:3.40.1090.10 20 125 8.0E-29 T 14-10-2018 JV59_01565 035f2421d37658ac7aef1d30866f0ef7 763 Pfam PF07244 Surface antigen variable number repeat 347 417 5.9E-6 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 JV59_01565 035f2421d37658ac7aef1d30866f0ef7 763 SUPERFAMILY SSF52151 31 317 1.05E-55 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JV59_18215 f959f517653837519c95efb78bbd0bb5 682 SMART SM00220 433 682 2.8E-6 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JV59_18215 f959f517653837519c95efb78bbd0bb5 682 Gene3D G3DSA:1.10.510.10 429 682 7.3E-27 T 14-10-2018 JV59_18215 f959f517653837519c95efb78bbd0bb5 682 SUPERFAMILY SSF56112 432 681 2.25E-31 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily JV59_18215 f959f517653837519c95efb78bbd0bb5 682 Pfam PF00069 Protein kinase domain 446 676 3.4E-16 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JV59_20460 3756222ffee5c69787a177b92098a3ee 185 SMART SM01266 5 58 1.2E-9 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 JV59_20460 3756222ffee5c69787a177b92098a3ee 185 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 129 164 1.4E-9 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_20460 3756222ffee5c69787a177b92098a3ee 185 Gene3D G3DSA:2.160.10.10 1 185 1.1E-66 T 14-10-2018 JV59_20460 3756222ffee5c69787a177b92098a3ee 185 SUPERFAMILY SSF51161 3 183 5.27E-49 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JV59_20460 3756222ffee5c69787a177b92098a3ee 185 Pfam PF12464 Maltose acetyltransferase 7 49 1.5E-10 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 JV59_20460 3756222ffee5c69787a177b92098a3ee 185 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 JV59_20775 801bb7840b54b9e5685ca064f684d674 242 SUPERFAMILY SSF53474 28 230 6.46E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_20775 801bb7840b54b9e5685ca064f684d674 242 Pfam PF06028 Alpha/beta hydrolase of unknown function (DUF915) 91 234 1.2E-4 T 14-10-2018 IPR010315 Protein of unknown function DUF915, hydrolase-like JV59_32105 1c99e4ebad6cc872256adaebdd09098a 361 SUPERFAMILY SSF55781 34 175 2.62E-17 T 14-10-2018 JV59_32105 1c99e4ebad6cc872256adaebdd09098a 361 Pfam PF01590 GAF domain 81 162 1.3E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 JV59_32105 1c99e4ebad6cc872256adaebdd09098a 361 Gene3D G3DSA:3.30.450.40 5 171 5.0E-12 T 14-10-2018 IPR029016 GAF-like domain superfamily JV59_32105 1c99e4ebad6cc872256adaebdd09098a 361 Gene3D G3DSA:3.30.70.270 172 348 7.9E-50 T 14-10-2018 JV59_32105 1c99e4ebad6cc872256adaebdd09098a 361 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 178 346 3.1E-42 T 14-10-2018 IPR000160 GGDEF domain JV59_32105 1c99e4ebad6cc872256adaebdd09098a 361 SMART SM00267 171 347 8.4E-56 T 14-10-2018 IPR000160 GGDEF domain JV59_32105 1c99e4ebad6cc872256adaebdd09098a 361 Pfam PF00990 Diguanylate cyclase, GGDEF domain 182 343 5.8E-39 T 14-10-2018 IPR000160 GGDEF domain JV59_32105 1c99e4ebad6cc872256adaebdd09098a 361 SUPERFAMILY SSF55073 187 346 1.02E-39 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_29680 3c6ac00f3fd685e6d8e572368938a70e 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 444 5.7E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_29680 3c6ac00f3fd685e6d8e572368938a70e 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 430 5.7E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_29680 3c6ac00f3fd685e6d8e572368938a70e 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 469 5.7E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_29680 3c6ac00f3fd685e6d8e572368938a70e 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 488 5.7E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_29680 3c6ac00f3fd685e6d8e572368938a70e 786 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 377 490 2.2E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_29680 3c6ac00f3fd685e6d8e572368938a70e 786 Pfam PF00512 His Kinase A (phospho-acceptor) domain 266 330 1.1E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_29680 3c6ac00f3fd685e6d8e572368938a70e 786 SMART SM00388 265 330 1.1E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JV59_29680 3c6ac00f3fd685e6d8e572368938a70e 786 Gene3D G3DSA:1.10.287.130 240 328 5.8E-24 T 14-10-2018 JV59_29680 3c6ac00f3fd685e6d8e572368938a70e 786 Pfam PF00072 Response regulator receiver domain 515 625 1.3E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_29680 3c6ac00f3fd685e6d8e572368938a70e 786 SMART SM00448 513 625 6.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_29680 3c6ac00f3fd685e6d8e572368938a70e 786 SUPERFAMILY SSF47226 674 769 2.36E-6 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_29680 3c6ac00f3fd685e6d8e572368938a70e 786 Gene3D G3DSA:3.40.50.2300 511 653 2.8E-32 T 14-10-2018 JV59_29680 3c6ac00f3fd685e6d8e572368938a70e 786 SMART SM00387 377 491 4.5E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_29680 3c6ac00f3fd685e6d8e572368938a70e 786 SUPERFAMILY SSF52172 511 654 1.71E-31 T 14-10-2018 IPR011006 CheY-like superfamily JV59_29680 3c6ac00f3fd685e6d8e572368938a70e 786 SUPERFAMILY SSF55874 319 489 1.28E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_29680 3c6ac00f3fd685e6d8e572368938a70e 786 Gene3D G3DSA:3.30.565.10 329 495 4.3E-49 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_29680 3c6ac00f3fd685e6d8e572368938a70e 786 SUPERFAMILY SSF47384 252 331 2.16E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JV59_33130 3c73a40f4f8fb7d11aa33db2e4c976dc 109 Pfam PF11872 Protein of unknown function (DUF3392) 3 106 4.1E-38 T 14-10-2018 IPR021813 Protein of unknown function DUF3392 JV59_39575 d3305fb08291cb23da8eb622d0a9d31f 274 Gene3D G3DSA:1.10.10.60 230 274 9.5E-11 T 14-10-2018 JV59_39575 d3305fb08291cb23da8eb622d0a9d31f 274 SUPERFAMILY SSF46689 223 271 7.62E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_39575 d3305fb08291cb23da8eb622d0a9d31f 274 SUPERFAMILY SSF46689 170 221 6.72E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_39575 d3305fb08291cb23da8eb622d0a9d31f 274 Pfam PF12833 Helix-turn-helix domain 193 270 8.1E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_39575 d3305fb08291cb23da8eb622d0a9d31f 274 SMART SM00342 187 269 8.2E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_39575 d3305fb08291cb23da8eb622d0a9d31f 274 Gene3D G3DSA:1.10.10.60 171 229 7.4E-11 T 14-10-2018 JV59_39575 d3305fb08291cb23da8eb622d0a9d31f 274 Pfam PF12852 Cupin 2 156 2.5E-23 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain JV59_24250 50c1aaf8f6ca6a13f34c5316e1983c07 202 Pfam PF08877 MepB protein 48 180 2.6E-31 T 14-10-2018 IPR011235 MepB-like JV59_24250 50c1aaf8f6ca6a13f34c5316e1983c07 202 Gene3D G3DSA:3.40.1350.140 30 195 1.1E-47 T 14-10-2018 IPR038231 MepB-like superfamily JV59_37885 15aaf6a0b084c234d60db8ddaeca6e6b 110 Gene3D G3DSA:3.90.470.10 1 110 1.7E-48 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 JV59_37885 15aaf6a0b084c234d60db8ddaeca6e6b 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.569 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37885 15aaf6a0b084c234d60db8ddaeca6e6b 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.1E-49 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_37885 15aaf6a0b084c234d60db8ddaeca6e6b 110 SUPERFAMILY SSF54843 1 109 1.16E-44 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 JV59_37885 15aaf6a0b084c234d60db8ddaeca6e6b 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JV59_37885 15aaf6a0b084c234d60db8ddaeca6e6b 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 6.5E-40 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 JV59_18155 019d1020bf2295f25da02bfb9f90f007 349 Gene3D G3DSA:3.30.70.270 163 333 5.0E-43 T 14-10-2018 JV59_18155 019d1020bf2295f25da02bfb9f90f007 349 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 329 1.1E-35 T 14-10-2018 IPR000160 GGDEF domain JV59_18155 019d1020bf2295f25da02bfb9f90f007 349 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 326 2.3E-34 T 14-10-2018 IPR000160 GGDEF domain JV59_18155 019d1020bf2295f25da02bfb9f90f007 349 SMART SM00267 166 330 1.6E-40 T 14-10-2018 IPR000160 GGDEF domain JV59_18155 019d1020bf2295f25da02bfb9f90f007 349 SUPERFAMILY SSF55073 182 331 4.0E-36 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_38075 6ca5347d56a9d0b28fda123472079caa 170 Pfam PF04186 FxsA cytoplasmic membrane protein 7 114 1.2E-34 T 14-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 JV59_28135 24e281c1941098b58578fc5b093eae13 410 Pfam PF01627 Hpt domain 318 394 5.7E-8 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 JV59_28135 24e281c1941098b58578fc5b093eae13 410 Gene3D G3DSA:1.20.120.160 295 408 7.8E-17 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_28135 24e281c1941098b58578fc5b093eae13 410 SUPERFAMILY SSF47226 297 407 3.27E-17 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_28135 24e281c1941098b58578fc5b093eae13 410 SMART SM00073 307 403 4.7E-4 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 JV59_37000 5c0692debe9de314f6a04e18db63fa4e 157 SUPERFAMILY SSF55826 6 156 3.66E-39 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 JV59_37000 5c0692debe9de314f6a04e18db63fa4e 157 Pfam PF04073 Aminoacyl-tRNA editing domain 28 147 1.6E-28 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 JV59_37000 5c0692debe9de314f6a04e18db63fa4e 157 Gene3D G3DSA:3.90.960.10 2 157 7.9E-41 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 JV59_35000 417ec04753ea763981bc1b0c761147ec 154 PIRSF PIRSF000709 1 85 1.5E-5 T 14-10-2018 JV59_35000 417ec04753ea763981bc1b0c761147ec 154 Gene3D G3DSA:3.40.50.1240 1 154 4.4E-36 T 14-10-2018 IPR029033 Histidine phosphatase superfamily JV59_35000 417ec04753ea763981bc1b0c761147ec 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 76 6.0E-10 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JV59_35000 417ec04753ea763981bc1b0c761147ec 154 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 154 3.7E-41 T 14-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 JV59_35000 417ec04753ea763981bc1b0c761147ec 154 SMART SM00855 2 116 9.4E-7 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JV59_35000 417ec04753ea763981bc1b0c761147ec 154 SUPERFAMILY SSF53254 1 144 4.71E-23 T 14-10-2018 IPR029033 Histidine phosphatase superfamily JV59_25675 6aa632cb80421cdfb390a5bfbf79be4e 399 Pfam PF13614 AAA domain 106 277 6.7E-26 T 14-10-2018 IPR025669 AAA domain JV59_25675 6aa632cb80421cdfb390a5bfbf79be4e 399 Gene3D G3DSA:3.40.50.300 107 395 7.1E-54 T 14-10-2018 JV59_25675 6aa632cb80421cdfb390a5bfbf79be4e 399 SUPERFAMILY SSF52540 106 362 3.32E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_35120 bd2a98a83fae6b668535275570a55a9a 712 TIGRFAM TIGR04456 LruC_dom: LruC domain 446 702 9.8E-78 T 14-10-2018 IPR031025 LruC domain JV59_35120 bd2a98a83fae6b668535275570a55a9a 712 Gene3D G3DSA:2.120.10.30 60 266 3.1E-8 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like JV59_35120 bd2a98a83fae6b668535275570a55a9a 712 SUPERFAMILY SSF63829 68 239 1.05E-9 T 14-10-2018 JV59_35120 bd2a98a83fae6b668535275570a55a9a 712 Pfam PF16130 Domain of unknown function (DUF4842) 477 701 2.2E-52 T 14-10-2018 IPR032295 Domain of unknown function DUF4842 JV59_24135 68afdcecfb7966ce9e9ffb35a2bfcf43 443 SUPERFAMILY SSF53383 7 437 2.21E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_24135 68afdcecfb7966ce9e9ffb35a2bfcf43 443 Pfam PF00202 Aminotransferase class-III 14 435 1.3E-104 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JV59_24135 68afdcecfb7966ce9e9ffb35a2bfcf43 443 PIRSF PIRSF000521 1 438 1.7E-32 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JV59_24135 68afdcecfb7966ce9e9ffb35a2bfcf43 443 Gene3D G3DSA:3.90.1150.10 15 435 3.8E-154 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_24135 68afdcecfb7966ce9e9ffb35a2bfcf43 443 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JV59_24135 68afdcecfb7966ce9e9ffb35a2bfcf43 443 Gene3D G3DSA:3.40.640.10 48 326 3.8E-154 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_01975 770d8b9421ef716373ba848618013e1e 245 SUPERFAMILY SSF46626 16 208 2.29E-48 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_01975 770d8b9421ef716373ba848618013e1e 245 Gene3D G3DSA:1.10.760.10 27 210 3.2E-18 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_01975 770d8b9421ef716373ba848618013e1e 245 Pfam PF02167 Cytochrome C1 family 34 244 5.4E-17 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 JV59_06675 00f6cf245a92ca1cf578fd33590629ed 248 Gene3D G3DSA:1.10.357.10 5 182 1.1E-12 T 14-10-2018 JV59_06675 00f6cf245a92ca1cf578fd33590629ed 248 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 4.6E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_06675 00f6cf245a92ca1cf578fd33590629ed 248 SUPERFAMILY SSF46689 9 78 2.59E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_06675 00f6cf245a92ca1cf578fd33590629ed 248 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 9.4E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_06675 00f6cf245a92ca1cf578fd33590629ed 248 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 9.4E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_28090 f1d30320cd32fa2143f68089db839cf4 249 Gene3D G3DSA:3.30.70.100 30 120 2.3E-19 T 14-10-2018 JV59_28090 f1d30320cd32fa2143f68089db839cf4 249 Gene3D G3DSA:3.30.70.100 143 232 3.2E-23 T 14-10-2018 JV59_28090 f1d30320cd32fa2143f68089db839cf4 249 SUPERFAMILY SSF54909 146 238 1.07E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_28090 f1d30320cd32fa2143f68089db839cf4 249 SUPERFAMILY SSF54909 38 128 3.22E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_27115 5408db624c5b81b4dc74c72ac4edce73 299 SMART SM00116 147 195 0.72 T 14-10-2018 IPR000644 CBS domain JV59_27115 5408db624c5b81b4dc74c72ac4edce73 299 SMART SM00116 84 133 0.0026 T 14-10-2018 IPR000644 CBS domain JV59_27115 5408db624c5b81b4dc74c72ac4edce73 299 Pfam PF03471 Transporter associated domain 212 287 1.4E-22 T 14-10-2018 IPR005170 Transporter-associated domain JV59_27115 5408db624c5b81b4dc74c72ac4edce73 299 SMART SM01091 211 289 6.1E-30 T 14-10-2018 IPR005170 Transporter-associated domain JV59_27115 5408db624c5b81b4dc74c72ac4edce73 299 SUPERFAMILY SSF56176 210 292 2.13E-23 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JV59_27115 5408db624c5b81b4dc74c72ac4edce73 299 SUPERFAMILY SSF54631 65 206 3.66E-33 T 14-10-2018 JV59_27115 5408db624c5b81b4dc74c72ac4edce73 299 Pfam PF00571 CBS domain 75 132 6.1E-9 T 14-10-2018 IPR000644 CBS domain JV59_27115 5408db624c5b81b4dc74c72ac4edce73 299 Pfam PF00571 CBS domain 146 195 2.7E-6 T 14-10-2018 IPR000644 CBS domain JV59_27115 5408db624c5b81b4dc74c72ac4edce73 299 Gene3D G3DSA:3.30.465.10 204 298 1.7E-31 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JV59_27115 5408db624c5b81b4dc74c72ac4edce73 299 Gene3D G3DSA:3.10.580.10 57 203 1.1E-53 T 14-10-2018 JV59_35410 29f5a9cf254512c74e470141de0dcb23 132 Pfam PF04241 Protein of unknown function (DUF423) 20 110 2.3E-31 T 14-10-2018 IPR006696 Protein of unknown function DUF423 JV59_19390 097cc3f35f7139700fe5df4342562852 106 SUPERFAMILY SSF54913 2 104 7.41E-33 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta JV59_19390 097cc3f35f7139700fe5df4342562852 106 Pfam PF03091 CutA1 divalent ion tolerance protein 6 102 7.4E-32 T 14-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 JV59_19390 097cc3f35f7139700fe5df4342562852 106 Gene3D G3DSA:3.30.70.120 1 104 1.3E-34 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JV59_17270 c2ed519908a8038eee1725d681bc4e44 87 Pfam PF11216 Protein of unknown function (DUF3012) 21 52 1.6E-16 T 14-10-2018 IPR021379 Protein of unknown function DUF3012 JV59_17270 c2ed519908a8038eee1725d681bc4e44 87 Pfam PF11216 Protein of unknown function (DUF3012) 56 87 8.0E-21 T 14-10-2018 IPR021379 Protein of unknown function DUF3012 JV59_36975 ec4e08c86c3b5f3ce6700762e0d0549f 192 SUPERFAMILY SSF88659 124 185 5.05E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JV59_36975 ec4e08c86c3b5f3ce6700762e0d0549f 192 Pfam PF04542 Sigma-70 region 2 25 92 1.9E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JV59_36975 ec4e08c86c3b5f3ce6700762e0d0549f 192 Pfam PF08281 Sigma-70, region 4 134 181 8.2E-17 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JV59_36975 ec4e08c86c3b5f3ce6700762e0d0549f 192 Gene3D G3DSA:1.10.10.10 122 192 3.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_36975 ec4e08c86c3b5f3ce6700762e0d0549f 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 2.5E-32 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JV59_36975 ec4e08c86c3b5f3ce6700762e0d0549f 192 SUPERFAMILY SSF88946 2 107 1.21E-32 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JV59_36975 ec4e08c86c3b5f3ce6700762e0d0549f 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 190 1.4E-102 T 14-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JV59_36975 ec4e08c86c3b5f3ce6700762e0d0549f 192 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JV59_36975 ec4e08c86c3b5f3ce6700762e0d0549f 192 Gene3D G3DSA:1.10.1740.10 1 121 5.5E-46 T 14-10-2018 JV59_23945 739d1f2d8e7bcf3ec1447f1e258e3230 338 Gene3D G3DSA:3.40.190.170 36 337 9.3E-82 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily JV59_23945 739d1f2d8e7bcf3ec1447f1e258e3230 338 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 43 315 6.8E-60 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 JV59_17670 3a193bf90ac02b97305824fcbe618fa0 227 Gene3D G3DSA:1.10.10.10 125 226 2.4E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_17670 3a193bf90ac02b97305824fcbe618fa0 227 SMART SM00448 2 113 2.1E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_17670 3a193bf90ac02b97305824fcbe618fa0 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 219 8.5E-12 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_17670 3a193bf90ac02b97305824fcbe618fa0 227 SMART SM00862 145 219 2.5E-7 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_17670 3a193bf90ac02b97305824fcbe618fa0 227 Pfam PF00072 Response regulator receiver domain 5 113 1.4E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_17670 3a193bf90ac02b97305824fcbe618fa0 227 SUPERFAMILY SSF46894 128 219 2.81E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_17670 3a193bf90ac02b97305824fcbe618fa0 227 Gene3D G3DSA:3.40.50.2300 1 122 1.0E-33 T 14-10-2018 JV59_17670 3a193bf90ac02b97305824fcbe618fa0 227 SUPERFAMILY SSF52172 4 119 9.53E-35 T 14-10-2018 IPR011006 CheY-like superfamily JV59_17535 4c0ed3954ed65218759972729aa119d6 739 Gene3D G3DSA:3.60.21.10 38 248 4.9E-12 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JV59_17535 4c0ed3954ed65218759972729aa119d6 739 SUPERFAMILY SSF56300 36 279 1.42E-20 T 14-10-2018 JV59_17535 4c0ed3954ed65218759972729aa119d6 739 Pfam PF00149 Calcineurin-like phosphoesterase 39 230 7.7E-10 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 JV59_17535 4c0ed3954ed65218759972729aa119d6 739 Gene3D G3DSA:2.60.40.1080 387 470 6.4E-9 T 14-10-2018 JV59_17535 4c0ed3954ed65218759972729aa119d6 739 ProSitePatterns PS00018 EF-hand calcium-binding domain. 716 728 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site JV59_21595 c9565a160bc156cfad9ce3a8623a78ee 150 SUPERFAMILY SSF46785 10 68 5.61E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_21595 c9565a160bc156cfad9ce3a8623a78ee 150 ProSitePatterns PS00519 AsnC-type HTH domain signature. 28 54 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site JV59_21595 c9565a160bc156cfad9ce3a8623a78ee 150 Gene3D G3DSA:1.10.10.10 2 63 7.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_21595 c9565a160bc156cfad9ce3a8623a78ee 150 SMART SM00344 10 116 6.7E-27 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 JV59_21595 c9565a160bc156cfad9ce3a8623a78ee 150 SUPERFAMILY SSF54909 75 145 5.63E-11 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_21595 c9565a160bc156cfad9ce3a8623a78ee 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 2.8E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_21595 c9565a160bc156cfad9ce3a8623a78ee 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 2.8E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_21595 c9565a160bc156cfad9ce3a8623a78ee 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 2.8E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_21595 c9565a160bc156cfad9ce3a8623a78ee 150 Pfam PF01037 Lrp/AsnC ligand binding domain 77 145 1.2E-10 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JV59_21595 c9565a160bc156cfad9ce3a8623a78ee 150 Gene3D G3DSA:3.30.70.920 64 150 5.0E-14 T 14-10-2018 JV59_21595 c9565a160bc156cfad9ce3a8623a78ee 150 Pfam PF13404 AsnC-type helix-turn-helix domain 10 51 2.0E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 JV59_20425 d642815977f922f6a3d99eb5fea5541f 125 Pfam PF01042 Endoribonuclease L-PSP 14 122 1.4E-18 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 JV59_20425 d642815977f922f6a3d99eb5fea5541f 125 SUPERFAMILY SSF55298 3 124 3.3E-25 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_20425 d642815977f922f6a3d99eb5fea5541f 125 Gene3D G3DSA:3.30.1330.40 8 125 6.4E-24 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_23995 dd0ed069e73d551f761ab15a8a6b75be 150 SUPERFAMILY SSF110087 3 141 3.27E-47 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily JV59_23995 dd0ed069e73d551f761ab15a8a6b75be 150 Gene3D G3DSA:2.60.40.1890 28 144 1.3E-39 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily JV59_23995 dd0ed069e73d551f761ab15a8a6b75be 150 Pfam PF04314 Copper chaperone PCu(A)C 26 133 1.5E-38 T 14-10-2018 IPR007410 Copper chaperone PCuAC JV59_31555 f99168087efddfe4f0e5969aa69b7b86 336 Pfam PF13407 Periplasmic binding protein domain 28 312 8.2E-49 T 14-10-2018 IPR025997 Periplasmic binding protein JV59_31555 f99168087efddfe4f0e5969aa69b7b86 336 Gene3D G3DSA:3.40.50.2300 138 329 9.4E-45 T 14-10-2018 JV59_31555 f99168087efddfe4f0e5969aa69b7b86 336 Gene3D G3DSA:3.40.50.2300 37 322 9.4E-45 T 14-10-2018 JV59_31555 f99168087efddfe4f0e5969aa69b7b86 336 SUPERFAMILY SSF53822 27 332 2.57E-46 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_31910 0accab8be6452b3fcd34dd79411776b5 492 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 21 491 1.5E-173 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath JV59_31910 0accab8be6452b3fcd34dd79411776b5 492 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 64 491 6.6E-165 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath JV59_01880 9c55b05e48be759feea3d7995b3d1d47 319 SUPERFAMILY SSF102114 13 268 4.84E-47 T 14-10-2018 JV59_01880 9c55b05e48be759feea3d7995b3d1d47 319 Pfam PF16199 Radical_SAM C-terminal domain 209 279 9.6E-19 T 14-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 JV59_01880 9c55b05e48be759feea3d7995b3d1d47 319 Gene3D G3DSA:3.80.30.20 42 272 1.2E-16 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe JV59_01880 9c55b05e48be759feea3d7995b3d1d47 319 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 299 5.8E-132 T 14-10-2018 IPR005911 Protein YhcC-like GO:0051536 JV59_01880 9c55b05e48be759feea3d7995b3d1d47 319 Pfam PF04055 Radical SAM superfamily 43 202 1.4E-16 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JV59_01880 9c55b05e48be759feea3d7995b3d1d47 319 SMART SM00729 23 247 2.5E-41 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JV59_18330 b17c1b04be9afa985be28bcf4ad74f70 558 TIGRFAM TIGR04456 LruC_dom: LruC domain 291 547 1.9E-80 T 14-10-2018 IPR031025 LruC domain JV59_18330 b17c1b04be9afa985be28bcf4ad74f70 558 Pfam PF13448 Domain of unknown function (DUF4114) 161 248 4.8E-22 T 14-10-2018 IPR025193 Domain of unknown function DUF4114 JV59_18330 b17c1b04be9afa985be28bcf4ad74f70 558 Pfam PF16130 Domain of unknown function (DUF4842) 326 546 5.2E-51 T 14-10-2018 IPR032295 Domain of unknown function DUF4842 JV59_29130 6c5c15fed4da6017d7cc2e5a1bee8981 132 Gene3D G3DSA:3.10.129.10 2 132 2.0E-40 T 14-10-2018 JV59_29130 6c5c15fed4da6017d7cc2e5a1bee8981 132 SUPERFAMILY SSF54637 9 131 7.06E-40 T 14-10-2018 IPR029069 HotDog domain superfamily JV59_29130 6c5c15fed4da6017d7cc2e5a1bee8981 132 Pfam PF03061 Thioesterase superfamily 26 98 1.0E-20 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 JV59_28800 51456e8b5a368bfd7ca1e9f3a5fd8fc0 182 Gene3D G3DSA:1.20.1270.340 1 99 1.1E-14 T 14-10-2018 IPR038338 PriB/PriC superfamily JV59_28800 51456e8b5a368bfd7ca1e9f3a5fd8fc0 182 Pfam PF07445 Primosomal replication protein priC 6 179 4.9E-39 T 14-10-2018 IPR010890 Primosomal replication PriB/PriC JV59_01045 aedee1edd6dfffbf7ec6c021954189d0 264 Pfam PF09955 Predicted integral membrane protein (DUF2189) 82 195 8.8E-27 T 14-10-2018 IPR018692 Predicted integral membrane protein DUF2189 JV59_21880 00cbc04f9073c8b0a5e84c47cbbb0a4b 240 PIRSF PIRSF005426 1 240 6.6E-82 T 14-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 JV59_21880 00cbc04f9073c8b0a5e84c47cbbb0a4b 240 Pfam PF00881 Nitroreductase family 8 159 6.6E-20 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 JV59_21880 00cbc04f9073c8b0a5e84c47cbbb0a4b 240 SUPERFAMILY SSF55469 1 238 1.28E-70 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JV59_21880 00cbc04f9073c8b0a5e84c47cbbb0a4b 240 Gene3D G3DSA:3.40.109.10 1 240 1.5E-74 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JV59_28395 414b45d63a25b6b3a0e206409a4ef5cb 237 SMART SM00862 158 234 3.4E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_28395 414b45d63a25b6b3a0e206409a4ef5cb 237 SUPERFAMILY SSF46894 133 235 5.95E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_28395 414b45d63a25b6b3a0e206409a4ef5cb 237 Gene3D G3DSA:1.10.10.10 128 237 3.7E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_28395 414b45d63a25b6b3a0e206409a4ef5cb 237 SUPERFAMILY SSF52172 2 129 1.42E-37 T 14-10-2018 IPR011006 CheY-like superfamily JV59_28395 414b45d63a25b6b3a0e206409a4ef5cb 237 Pfam PF00072 Response regulator receiver domain 5 113 3.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_28395 414b45d63a25b6b3a0e206409a4ef5cb 237 Gene3D G3DSA:3.40.50.2300 1 127 7.4E-34 T 14-10-2018 JV59_28395 414b45d63a25b6b3a0e206409a4ef5cb 237 SMART SM00448 3 113 1.8E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_28395 414b45d63a25b6b3a0e206409a4ef5cb 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 2.1E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_16340 3cfc6df8b0d71423d13d29f927f764ec 569 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 227 246 9.0E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_16340 3cfc6df8b0d71423d13d29f927f764ec 569 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 294 309 9.0E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_16340 3cfc6df8b0d71423d13d29f927f764ec 569 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 138 152 9.0E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_16340 3cfc6df8b0d71423d13d29f927f764ec 569 Gene3D G3DSA:3.40.120.10 324 445 3.7E-30 T 14-10-2018 JV59_16340 3cfc6df8b0d71423d13d29f927f764ec 569 Gene3D G3DSA:3.40.120.10 31 184 3.4E-46 T 14-10-2018 JV59_16340 3cfc6df8b0d71423d13d29f927f764ec 569 SUPERFAMILY SSF53738 29 215 7.46E-44 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_16340 3cfc6df8b0d71423d13d29f927f764ec 569 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 139 148 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_16340 3cfc6df8b0d71423d13d29f927f764ec 569 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 179 7.5E-41 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_16340 3cfc6df8b0d71423d13d29f927f764ec 569 SUPERFAMILY SSF55957 436 558 2.62E-13 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_16340 3cfc6df8b0d71423d13d29f927f764ec 569 Gene3D G3DSA:3.30.310.50 450 554 6.0E-7 T 14-10-2018 JV59_16340 3cfc6df8b0d71423d13d29f927f764ec 569 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 489 536 1.5E-8 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_16340 3cfc6df8b0d71423d13d29f927f764ec 569 SUPERFAMILY SSF53738 302 446 3.06E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_16340 3cfc6df8b0d71423d13d29f927f764ec 569 SUPERFAMILY SSF53738 203 311 1.57E-20 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_16340 3cfc6df8b0d71423d13d29f927f764ec 569 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 205 310 1.5E-24 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_16340 3cfc6df8b0d71423d13d29f927f764ec 569 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 322 440 5.7E-16 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JV59_16340 3cfc6df8b0d71423d13d29f927f764ec 569 Gene3D G3DSA:3.40.120.10 203 323 1.1E-20 T 14-10-2018 JV59_29835 ff44304642b0ca2b64b1b4c29059b260 307 Pfam PF03547 Membrane transport protein 156 298 6.6E-12 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 JV59_28230 8fd9f200219bf205a875a970f5c09f01 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 123 7.5E-15 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JV59_28230 8fd9f200219bf205a875a970f5c09f01 131 Gene3D G3DSA:3.10.180.10 1 129 5.3E-31 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_28230 8fd9f200219bf205a875a970f5c09f01 131 SUPERFAMILY SSF54593 2 127 1.75E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_25230 ef1acb229f90f2e9648def9acdcad2e6 456 SUPERFAMILY SSF52374 6 326 1.18E-72 T 14-10-2018 JV59_25230 ef1acb229f90f2e9648def9acdcad2e6 456 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 6 456 30.752 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 JV59_25230 ef1acb229f90f2e9648def9acdcad2e6 456 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 6 450 5.4E-117 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 JV59_25230 ef1acb229f90f2e9648def9acdcad2e6 456 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 29 40 1.1E-22 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JV59_25230 ef1acb229f90f2e9648def9acdcad2e6 456 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 65 74 1.1E-22 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JV59_25230 ef1acb229f90f2e9648def9acdcad2e6 456 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 236 257 1.1E-22 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JV59_25230 ef1acb229f90f2e9648def9acdcad2e6 456 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 205 223 1.1E-22 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JV59_25230 ef1acb229f90f2e9648def9acdcad2e6 456 SUPERFAMILY SSF47323 345 451 2.88E-16 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 JV59_25230 ef1acb229f90f2e9648def9acdcad2e6 456 Gene3D G3DSA:3.40.50.620 4 319 6.7E-120 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_25230 ef1acb229f90f2e9648def9acdcad2e6 456 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 20 327 4.1E-87 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 JV59_25230 ef1acb229f90f2e9648def9acdcad2e6 456 Gene3D G3DSA:1.20.120.640 321 453 9.6E-17 T 14-10-2018 JV59_20335 32e0d1f0c1f4ae9a46e838a0e30787df 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 342 508 6.9E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_20335 32e0d1f0c1f4ae9a46e838a0e30787df 542 Pfam PF00672 HAMP domain 215 261 4.3E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_20335 32e0d1f0c1f4ae9a46e838a0e30787df 542 Gene3D G3DSA:1.10.287.950 213 542 1.5E-72 T 14-10-2018 JV59_20335 32e0d1f0c1f4ae9a46e838a0e30787df 542 SUPERFAMILY SSF58104 233 542 8.11E-71 T 14-10-2018 JV59_20335 32e0d1f0c1f4ae9a46e838a0e30787df 542 SMART SM00304 213 265 4.9E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JV59_20335 32e0d1f0c1f4ae9a46e838a0e30787df 542 SMART SM00283 280 541 1.8E-68 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_30485 ab8a4e1597a333a3cf9bea373b9077a9 200 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 4 200 20.844 T 14-10-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 JV59_30485 ab8a4e1597a333a3cf9bea373b9077a9 200 Pfam PF01794 Ferric reductase like transmembrane component 49 161 6.3E-14 T 14-10-2018 IPR013130 Ferric reductase transmembrane component-like domain JV59_19675 8cb74fdc735084173dc0ba3280a2775a 445 Pfam PF06812 ImpA, N-terminal, type VI secretion system 9 119 6.9E-26 T 14-10-2018 IPR010657 ImpA, N-terminal JV59_20795 833ddb94ae1469ff43b745b5007e448c 386 Gene3D G3DSA:3.40.50.150 141 386 1.4E-51 T 14-10-2018 JV59_20795 833ddb94ae1469ff43b745b5007e448c 386 SMART SM00422 2 70 2.0E-20 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_20795 833ddb94ae1469ff43b745b5007e448c 386 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 2.9E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_20795 833ddb94ae1469ff43b745b5007e448c 386 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.9E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_20795 833ddb94ae1469ff43b745b5007e448c 386 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 2.9E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_20795 833ddb94ae1469ff43b745b5007e448c 386 SUPERFAMILY SSF46955 2 102 6.59E-21 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily JV59_20795 833ddb94ae1469ff43b745b5007e448c 386 Pfam PF08241 Methyltransferase domain 188 282 1.0E-15 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 JV59_20795 833ddb94ae1469ff43b745b5007e448c 386 SUPERFAMILY SSF53335 135 385 1.05E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_20795 833ddb94ae1469ff43b745b5007e448c 386 Pfam PF13411 MerR HTH family regulatory protein 2 68 4.2E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JV59_20795 833ddb94ae1469ff43b745b5007e448c 386 Gene3D G3DSA:1.10.1660.10 1 111 3.5E-23 T 14-10-2018 JV59_20795 833ddb94ae1469ff43b745b5007e448c 386 Pfam PF14479 Prion-inhibition and propagation 2 177 3.3E-6 T 14-10-2018 IPR029498 Prion-inhibition and propagation, HeLo domain JV59_36330 e2ac61be749adfce945e02fec4903b85 322 Pfam PF00482 Type II secretion system (T2SS), protein F 155 279 6.2E-20 T 14-10-2018 IPR018076 Type II secretion system F domain JV59_36330 e2ac61be749adfce945e02fec4903b85 322 Gene3D G3DSA:1.20.81.30 146 258 3.4E-7 T 14-10-2018 JV59_38345 2b01ea5fb798bcc03322f9c85ac3c1ee 181 SUPERFAMILY SSF56235 2 172 1.81E-57 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JV59_38345 2b01ea5fb798bcc03322f9c85ac3c1ee 181 Pfam PF00227 Proteasome subunit 2 169 1.6E-23 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 JV59_38345 2b01ea5fb798bcc03322f9c85ac3c1ee 181 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 5.3E-87 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 JV59_38345 2b01ea5fb798bcc03322f9c85ac3c1ee 181 PIRSF PIRSF039093 1 175 2.3E-88 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 JV59_38345 2b01ea5fb798bcc03322f9c85ac3c1ee 181 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.776 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 JV59_38345 2b01ea5fb798bcc03322f9c85ac3c1ee 181 Gene3D G3DSA:3.60.20.10 1 173 3.1E-67 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JV59_24640 c47d056189f0fa0d3867e5cda45872da 150 Pfam PF00293 NUDIX domain 17 123 4.3E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JV59_24640 c47d056189f0fa0d3867e5cda45872da 150 SUPERFAMILY SSF55811 12 136 4.33E-25 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JV59_24640 c47d056189f0fa0d3867e5cda45872da 150 Gene3D G3DSA:3.90.79.10 2 142 3.3E-25 T 14-10-2018 JV59_28550 803d0c8b68ddf96833097947a17f412e 567 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 51 531 6.7E-71 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 JV59_28695 a8b1f7d053281cdfc4af156736928e60 363 Gene3D G3DSA:3.20.20.70 1 363 1.9E-136 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_28695 a8b1f7d053281cdfc4af156736928e60 363 SUPERFAMILY SSF51395 1 363 3.26E-121 T 14-10-2018 JV59_28695 a8b1f7d053281cdfc4af156736928e60 363 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 340 7.1E-94 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 JV59_21755 32647c00b59ac5b07f94c24ea8d0f77c 478 SUPERFAMILY SSF53720 18 449 8.64E-109 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JV59_21755 32647c00b59ac5b07f94c24ea8d0f77c 478 Gene3D G3DSA:3.40.605.10 38 448 2.0E-144 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JV59_21755 32647c00b59ac5b07f94c24ea8d0f77c 478 Pfam PF00171 Aldehyde dehydrogenase family 43 448 1.2E-83 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JV59_21755 32647c00b59ac5b07f94c24ea8d0f77c 478 Gene3D G3DSA:3.40.309.10 229 428 2.0E-144 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JV59_21755 32647c00b59ac5b07f94c24ea8d0f77c 478 PIRSF PIRSF036492 9 477 4.9E-151 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 JV59_21755 32647c00b59ac5b07f94c24ea8d0f77c 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 225 232 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JV59_24395 e82703761acc8d51646dc1bd93766c81 185 Pfam PF06042 Nucleotidyltransferase 22 181 6.7E-38 T 14-10-2018 IPR009267 Putative nucleotidyltransferase JV59_17005 760a40833991234e9717ab01e99525a8 439 Pfam PF04932 O-Antigen ligase 218 360 2.3E-18 T 14-10-2018 IPR007016 O-antigen ligase-related JV59_39835 9514b2d2a9365554ac87c8b71d0db1e9 86 Pfam PF10048 Predicted integral membrane protein (DUF2282) 33 82 3.7E-22 T 14-10-2018 IPR018740 Protein of unknown function DUF2282, integral membrane JV59_28865 ea61d64261f9d3b557dc230d6371a242 412 Pfam PF02353 Mycolic acid cyclopropane synthetase 136 406 7.8E-79 T 14-10-2018 JV59_28865 ea61d64261f9d3b557dc230d6371a242 412 PIRSF PIRSF003085 19 412 7.1E-118 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 JV59_28865 ea61d64261f9d3b557dc230d6371a242 412 Gene3D G3DSA:3.40.50.150 143 412 2.3E-96 T 14-10-2018 JV59_28865 ea61d64261f9d3b557dc230d6371a242 412 SUPERFAMILY SSF53335 21 365 5.46E-86 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_16610 0f9fc6d63dc5892dffa882faa78e938a 296 SUPERFAMILY SSF103481 190 289 1.02E-9 T 14-10-2018 JV59_16610 0f9fc6d63dc5892dffa882faa78e938a 296 SUPERFAMILY SSF103481 47 145 1.44E-7 T 14-10-2018 JV59_16610 0f9fc6d63dc5892dffa882faa78e938a 296 Pfam PF00892 EamA-like transporter family 154 285 3.7E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_16610 0f9fc6d63dc5892dffa882faa78e938a 296 Pfam PF00892 EamA-like transporter family 11 145 9.3E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_17510 9e0296b982dbf73f58f796fa32eb8efe 327 Gene3D G3DSA:1.10.10.60 226 326 2.3E-16 T 14-10-2018 JV59_17510 9e0296b982dbf73f58f796fa32eb8efe 327 Pfam PF12833 Helix-turn-helix domain 250 324 2.5E-12 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_17510 9e0296b982dbf73f58f796fa32eb8efe 327 SUPERFAMILY SSF46689 280 325 1.12E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_17510 9e0296b982dbf73f58f796fa32eb8efe 327 SMART SM00342 241 322 1.1E-11 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JV59_17510 9e0296b982dbf73f58f796fa32eb8efe 327 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 26 190 1.5E-16 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal JV59_17510 9e0296b982dbf73f58f796fa32eb8efe 327 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 306 322 1.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_17510 9e0296b982dbf73f58f796fa32eb8efe 327 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 291 306 1.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JV59_25620 b4d38cda9020f521eb8671cd9f1be62a 125 Pfam PF01042 Endoribonuclease L-PSP 7 122 4.8E-35 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 JV59_25620 b4d38cda9020f521eb8671cd9f1be62a 125 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 122 3.1E-41 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 JV59_25620 b4d38cda9020f521eb8671cd9f1be62a 125 Gene3D G3DSA:3.30.1330.40 1 124 2.1E-43 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_25620 b4d38cda9020f521eb8671cd9f1be62a 125 SUPERFAMILY SSF55298 4 124 3.3E-41 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JV59_01190 6f7c380da948e54885a0f752cff785f8 269 SUPERFAMILY SSF56300 4 257 1.5E-57 T 14-10-2018 JV59_01190 6f7c380da948e54885a0f752cff785f8 269 Pfam PF00149 Calcineurin-like phosphoesterase 5 153 1.6E-15 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 JV59_01190 6f7c380da948e54885a0f752cff785f8 269 Gene3D G3DSA:3.60.21.10 2 269 3.0E-78 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JV59_01190 6f7c380da948e54885a0f752cff785f8 269 PIRSF PIRSF000903 1 269 2.1E-121 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 JV59_01190 6f7c380da948e54885a0f752cff785f8 269 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 2 267 3.1E-120 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 JV59_01190 6f7c380da948e54885a0f752cff785f8 269 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 269 48.058 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 JV59_24265 029fcd28fd7f8c97f5ad01c47301db01 448 Gene3D G3DSA:3.40.50.300 1 174 3.1E-24 T 14-10-2018 JV59_24265 029fcd28fd7f8c97f5ad01c47301db01 448 SUPERFAMILY SSF52540 2 217 4.58E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_24265 029fcd28fd7f8c97f5ad01c47301db01 448 Pfam PF01637 ATPase domain predominantly from Archaea 5 210 2.0E-10 T 14-10-2018 IPR011579 ATPase domain GO:0005524 JV59_24265 029fcd28fd7f8c97f5ad01c47301db01 448 Pfam PF03008 Archaea bacterial proteins of unknown function 318 404 1.8E-14 T 14-10-2018 IPR004256 Domain of unknown function DUF234, DEXX-box ATPase C-terminal JV59_20720 6378676fe380aa9657f33b7deb22304a 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 288 307 1.9E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 JV59_20720 6378676fe380aa9657f33b7deb22304a 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 308 327 1.9E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 JV59_20720 6378676fe380aa9657f33b7deb22304a 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 251 275 1.9E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 JV59_20720 6378676fe380aa9657f33b7deb22304a 366 Pfam PF12698 ABC-2 family transporter protein 25 357 4.5E-46 T 14-10-2018 JV59_25255 a35726a747cd9240d863cc9cba67e7c8 335 Gene3D G3DSA:3.60.130.10 9 335 8.6E-94 T 14-10-2018 JV59_25255 a35726a747cd9240d863cc9cba67e7c8 335 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 45 332 2.0E-43 T 14-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 JV59_25255 a35726a747cd9240d863cc9cba67e7c8 335 SUPERFAMILY SSF51197 33 334 4.58E-76 T 14-10-2018 JV59_38240 8341a76b7282084e5c41b8d68a56005e 193 SUPERFAMILY SSF52141 2 187 1.18E-57 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JV59_38240 8341a76b7282084e5c41b8d68a56005e 193 Gene3D G3DSA:3.40.470.10 1 190 9.2E-71 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JV59_38240 8341a76b7282084e5c41b8d68a56005e 193 SMART SM00986 26 182 1.5E-29 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JV59_38240 8341a76b7282084e5c41b8d68a56005e 193 Pfam PF03167 Uracil DNA glycosylase superfamily 30 177 7.5E-25 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JV59_38240 8341a76b7282084e5c41b8d68a56005e 193 SMART SM00987 26 182 1.5E-29 T 14-10-2018 JV59_28255 febde447a4f0dddc00d1806a83b5f2ab 284 SUPERFAMILY SSF53335 4 261 4.33E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_28255 febde447a4f0dddc00d1806a83b5f2ab 284 PIRSF PIRSF018249 1 274 1.2E-84 T 14-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 JV59_28255 febde447a4f0dddc00d1806a83b5f2ab 284 Gene3D G3DSA:3.40.50.150 1 273 1.7E-78 T 14-10-2018 JV59_28255 febde447a4f0dddc00d1806a83b5f2ab 284 Pfam PF13847 Methyltransferase domain 87 202 4.7E-15 T 14-10-2018 IPR025714 Methyltransferase domain JV59_26345 a5005fe6e5f16dec790880b0f8b08526 146 SUPERFAMILY SSF54523 7 132 1.05E-13 T 14-10-2018 JV59_26345 a5005fe6e5f16dec790880b0f8b08526 146 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 1.5E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_26345 a5005fe6e5f16dec790880b0f8b08526 146 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 6.7E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_26345 a5005fe6e5f16dec790880b0f8b08526 146 Gene3D G3DSA:3.30.700.10 7 146 7.8E-14 T 14-10-2018 JV59_26345 a5005fe6e5f16dec790880b0f8b08526 146 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_01310 f6639083624589c50c333dc8eb0b58c2 203 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 194 2.3E-74 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 JV59_01310 f6639083624589c50c333dc8eb0b58c2 203 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 3.0E-51 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 JV59_01310 f6639083624589c50c333dc8eb0b58c2 203 SMART SM01207 10 185 1.2E-85 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 JV59_01310 f6639083624589c50c333dc8eb0b58c2 203 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 19.196 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 JV59_33260 2dfcc8a0f9103c9c3431a49efc2f607d 418 SUPERFAMILY SSF118215 15 403 1.02E-109 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 JV59_33260 2dfcc8a0f9103c9c3431a49efc2f607d 418 Pfam PF00375 Sodium:dicarboxylate symporter family 15 403 1.9E-118 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 JV59_33260 2dfcc8a0f9103c9c3431a49efc2f607d 418 Gene3D G3DSA:1.10.3860.10 2 417 1.1E-117 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 JV59_33260 2dfcc8a0f9103c9c3431a49efc2f607d 418 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 1.2E-53 T 14-10-2018 JV59_33260 2dfcc8a0f9103c9c3431a49efc2f607d 418 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 1.2E-53 T 14-10-2018 JV59_33260 2dfcc8a0f9103c9c3431a49efc2f607d 418 PRINTS PR00173 Glutamate-aspartate symporter signature 48 68 1.2E-53 T 14-10-2018 JV59_33260 2dfcc8a0f9103c9c3431a49efc2f607d 418 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 1.2E-53 T 14-10-2018 JV59_33260 2dfcc8a0f9103c9c3431a49efc2f607d 418 PRINTS PR00173 Glutamate-aspartate symporter signature 230 249 1.2E-53 T 14-10-2018 JV59_33260 2dfcc8a0f9103c9c3431a49efc2f607d 418 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 1.2E-53 T 14-10-2018 JV59_33260 2dfcc8a0f9103c9c3431a49efc2f607d 418 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 1.2E-53 T 14-10-2018 JV59_33260 2dfcc8a0f9103c9c3431a49efc2f607d 418 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 1.2E-53 T 14-10-2018 JV59_33260 2dfcc8a0f9103c9c3431a49efc2f607d 418 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 1.2E-53 T 14-10-2018 JV59_16630 71f68e43908bbcef4069d5fbbc2172b4 206 Gene3D G3DSA:3.40.50.360 1 181 1.4E-52 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_16630 71f68e43908bbcef4069d5fbbc2172b4 206 SUPERFAMILY SSF52218 5 180 2.99E-49 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_16630 71f68e43908bbcef4069d5fbbc2172b4 206 Pfam PF02525 Flavodoxin-like fold 5 173 1.6E-45 T 14-10-2018 IPR003680 Flavodoxin-like fold JV59_39685 886793612d5b0c38f27442ac932a54c1 83 Pfam PF04380 Membrane fusogenic activity 1 78 1.9E-27 T 14-10-2018 IPR007475 Membrane fusogenic activity JV59_25915 ce1f948017ffed1279296d547436e23f 118 Pfam PF07978 NIPSNAP 6 101 5.2E-25 T 14-10-2018 IPR012577 NIPSNAP JV59_25915 ce1f948017ffed1279296d547436e23f 118 SUPERFAMILY SSF54909 2 101 2.25E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_29190 751c60be93ae900673221d3a21967171 618 Pfam PF13387 Domain of unknown function (DUF4105) 120 291 1.2E-58 T 14-10-2018 IPR025178 Domain of unknown function DUF4105 JV59_18905 e72ec9bce5daf28343065a4d04767d94 316 Gene3D G3DSA:3.40.1190.20 1 312 1.4E-76 T 14-10-2018 IPR029056 Ribokinase-like JV59_18905 e72ec9bce5daf28343065a4d04767d94 316 SUPERFAMILY SSF53613 1 306 6.7E-71 T 14-10-2018 IPR029056 Ribokinase-like JV59_18905 e72ec9bce5daf28343065a4d04767d94 316 Pfam PF00294 pfkB family carbohydrate kinase 1 307 1.4E-67 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB JV59_18905 e72ec9bce5daf28343065a4d04767d94 316 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 262 275 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 JV59_40070 37fcec722cbcc4cc920a33d1c3e45bd9 337 Pfam PF01757 Acyltransferase family 7 326 2.9E-29 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 JV59_29825 4d848691dd3c85fb16427b515e31fa26 243 Pfam PF12525 Protein of unknown function (DUF3726) 3 80 1.6E-28 T 14-10-2018 IPR022201 Protein of unknown function DUF3726 JV59_34805 8ff2f33a32eaf2f30956e3789c735d40 202 Pfam PF11140 Protein of unknown function (DUF2913) 13 192 3.8E-22 T 14-10-2018 IPR021316 Protein of unknown function DUF2913 JV59_18770 8ee67cc9de62807189d75dcd23e64373 217 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 33.535 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 JV59_18770 8ee67cc9de62807189d75dcd23e64373 217 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 JV59_18770 8ee67cc9de62807189d75dcd23e64373 217 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 217 1.2E-78 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 JV59_18770 8ee67cc9de62807189d75dcd23e64373 217 Gene3D G3DSA:3.30.1130.10 85 217 1.4E-51 T 14-10-2018 JV59_18770 8ee67cc9de62807189d75dcd23e64373 217 Pfam PF01227 GTP cyclohydrolase I 38 216 2.4E-63 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 JV59_18770 8ee67cc9de62807189d75dcd23e64373 217 Gene3D G3DSA:1.10.286.10 1 84 9.2E-37 T 14-10-2018 JV59_18770 8ee67cc9de62807189d75dcd23e64373 217 SUPERFAMILY SSF55620 10 217 4.15E-74 T 14-10-2018 JV59_18770 8ee67cc9de62807189d75dcd23e64373 217 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 JV59_25710 d0fb734706796f4cecde97ea7aff576a 135 SUPERFAMILY SSF46894 34 114 3.12E-8 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JV59_25710 d0fb734706796f4cecde97ea7aff576a 135 Gene3D G3DSA:1.10.10.10 25 125 3.5E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_25710 d0fb734706796f4cecde97ea7aff576a 135 Pfam PF00486 Transcriptional regulatory protein, C terminal 50 113 2.0E-6 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JV59_17365 2e4df91268c006f254e3bff1422db7b2 398 Gene3D G3DSA:1.20.1250.20 1 190 1.2E-15 T 14-10-2018 JV59_17365 2e4df91268c006f254e3bff1422db7b2 398 Gene3D G3DSA:1.20.1250.20 206 392 1.0E-19 T 14-10-2018 JV59_17365 2e4df91268c006f254e3bff1422db7b2 398 SUPERFAMILY SSF103473 3 389 8.63E-47 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_17365 2e4df91268c006f254e3bff1422db7b2 398 Pfam PF07690 Major Facilitator Superfamily 213 390 1.6E-19 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_17365 2e4df91268c006f254e3bff1422db7b2 398 Pfam PF07690 Major Facilitator Superfamily 11 195 1.1E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_29180 9c71831dd9e55b3dd9d55c5db8ca48a4 616 Gene3D G3DSA:2.70.240.20 159 582 1.7E-154 T 14-10-2018 JV59_29180 9c71831dd9e55b3dd9d55c5db8ca48a4 616 Pfam PF07968 Leukocidin/Hemolysin toxin family 208 472 1.8E-44 T 14-10-2018 IPR016183 Leukocidin/Hemolysin toxin GO:0005576|GO:0051715 JV59_29180 9c71831dd9e55b3dd9d55c5db8ca48a4 616 Gene3D G3DSA:3.30.70.2270 297 344 1.7E-154 T 14-10-2018 JV59_29180 9c71831dd9e55b3dd9d55c5db8ca48a4 616 SUPERFAMILY SSF50370 481 573 2.52E-11 T 14-10-2018 IPR035992 Ricin B-like lectins JV59_29180 9c71831dd9e55b3dd9d55c5db8ca48a4 616 SMART SM00458 479 600 1.7E-7 T 14-10-2018 IPR000772 Ricin B, lectin domain JV59_29180 9c71831dd9e55b3dd9d55c5db8ca48a4 616 Pfam PF12563 Hemolytic toxin N terminal 3 177 2.0E-41 T 14-10-2018 IPR022220 Hemolytic toxin, N-terminal JV59_29180 9c71831dd9e55b3dd9d55c5db8ca48a4 616 Gene3D G3DSA:3.30.110.130 44 128 6.2E-28 T 14-10-2018 JV59_32505 61d2107948cad4e5957701c4212f4f28 396 Pfam PF01979 Amidohydrolase family 52 372 1.2E-17 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JV59_32505 61d2107948cad4e5957701c4212f4f28 396 TIGRFAM TIGR01224 hutI: imidazolonepropionase 21 392 8.4E-153 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JV59_32505 61d2107948cad4e5957701c4212f4f28 396 SUPERFAMILY SSF51338 1 393 3.03E-23 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JV59_32505 61d2107948cad4e5957701c4212f4f28 396 SUPERFAMILY SSF51556 55 354 7.11E-86 T 14-10-2018 IPR032466 Metal-dependent hydrolase JV59_32505 61d2107948cad4e5957701c4212f4f28 396 Hamap MF_00372 Imidazolonepropionase [hutI]. 1 394 41.173 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 JV59_32505 61d2107948cad4e5957701c4212f4f28 396 Gene3D G3DSA:2.30.40.10 4 391 1.4E-160 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JV59_32505 61d2107948cad4e5957701c4212f4f28 396 Gene3D G3DSA:3.20.20.140 56 354 1.4E-160 T 14-10-2018 JV59_29720 3bd892611d0d27275fc6a6784f37895d 579 Gene3D G3DSA:1.20.1730.10 25 498 1.3E-110 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily JV59_29720 3bd892611d0d27275fc6a6784f37895d 579 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 434 6.7E-73 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 JV59_29720 3bd892611d0d27275fc6a6784f37895d 579 Pfam PF00474 Sodium:solute symporter family 36 433 4.2E-56 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 JV59_34440 bb7d507682ff178f1e28116c6b008518 197 Pfam PF13505 Outer membrane protein beta-barrel domain 13 197 7.1E-8 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel JV59_34440 bb7d507682ff178f1e28116c6b008518 197 SUPERFAMILY SSF56925 68 197 2.09E-17 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JV59_34440 bb7d507682ff178f1e28116c6b008518 197 Gene3D G3DSA:2.40.160.20 29 197 1.3E-9 T 14-10-2018 JV59_24020 d46e5179c781bba86db9a996f01fb811 217 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 212 1.1E-53 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 JV59_24020 d46e5179c781bba86db9a996f01fb811 217 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 216 28.315 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 JV59_25020 e0d17ccce0f7ef9f94925d64545603f4 131 Pfam PF09622 Putative integral membrane protein (DUF2391) 8 122 1.6E-10 T 14-10-2018 IPR024464 Protein of unknown function DUF2391 JV59_30160 c5f16b948d755afb3d61b9dff870107e 267 Gene3D G3DSA:2.30.260.10 170 266 1.8E-21 T 14-10-2018 JV59_30160 c5f16b948d755afb3d61b9dff870107e 267 SUPERFAMILY SSF54001 30 261 4.91E-62 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily JV59_30160 c5f16b948d755afb3d61b9dff870107e 267 Gene3D G3DSA:1.10.3670.10 47 169 5.1E-20 T 14-10-2018 JV59_30160 c5f16b948d755afb3d61b9dff870107e 267 Pfam PF07313 Protein of unknown function (DUF1460) 57 253 2.0E-57 T 14-10-2018 IPR010846 Protein of unknown function DUF1460 JV59_17090 cf7fd045130ece21c1e9ebb4f13f03e3 303 Pfam PF00892 EamA-like transporter family 7 136 1.9E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_17090 cf7fd045130ece21c1e9ebb4f13f03e3 303 Pfam PF00892 EamA-like transporter family 152 284 1.6E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_17090 cf7fd045130ece21c1e9ebb4f13f03e3 303 SUPERFAMILY SSF103481 43 137 2.22E-12 T 14-10-2018 JV59_17090 cf7fd045130ece21c1e9ebb4f13f03e3 303 SUPERFAMILY SSF103481 184 290 2.09E-7 T 14-10-2018 JV59_35460 9bd6f26689b3fecd39e34f5bc46e38f1 104 Gene3D G3DSA:1.20.1440.40 1 104 9.3E-33 T 14-10-2018 IPR036814 YqcC-like superfamily JV59_35460 9bd6f26689b3fecd39e34f5bc46e38f1 104 PIRSF PIRSF006257 1 104 1.4E-37 T 14-10-2018 IPR007384 Protein of unknown function UCP006257 JV59_35460 9bd6f26689b3fecd39e34f5bc46e38f1 104 SUPERFAMILY SSF158452 1 103 2.88E-36 T 14-10-2018 IPR036814 YqcC-like superfamily JV59_35460 9bd6f26689b3fecd39e34f5bc46e38f1 104 Pfam PF04287 tRNA pseudouridine synthase C 8 101 1.3E-33 T 14-10-2018 IPR023376 YqcC-like domain JV59_22455 02cdd4a8208da78b3a7e276aa0c18c95 958 SUPERFAMILY SSF53649 380 654 3.4E-11 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 JV59_22455 02cdd4a8208da78b3a7e276aa0c18c95 958 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 385 648 1.4E-12 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 JV59_27910 661fdb6ece433db0541e6ae207b42d6a 317 SMART SM00267 141 317 1.3E-42 T 14-10-2018 IPR000160 GGDEF domain JV59_27910 661fdb6ece433db0541e6ae207b42d6a 317 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 148 314 4.3E-38 T 14-10-2018 IPR000160 GGDEF domain JV59_27910 661fdb6ece433db0541e6ae207b42d6a 317 SUPERFAMILY SSF55073 157 315 1.06E-37 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_27910 661fdb6ece433db0541e6ae207b42d6a 317 Gene3D G3DSA:3.30.70.270 138 316 1.1E-41 T 14-10-2018 JV59_27910 661fdb6ece433db0541e6ae207b42d6a 317 Pfam PF00990 Diguanylate cyclase, GGDEF domain 156 311 2.0E-34 T 14-10-2018 IPR000160 GGDEF domain JV59_33060 80d00fa6b4889d199e50c31b9e0a1355 570 SUPERFAMILY SSF141868 356 568 2.48E-45 T 14-10-2018 IPR035919 EAL domain superfamily JV59_33060 80d00fa6b4889d199e50c31b9e0a1355 570 Pfam PF00563 EAL domain 358 568 7.3E-41 T 14-10-2018 IPR001633 EAL domain JV59_33060 80d00fa6b4889d199e50c31b9e0a1355 570 SMART SM00052 343 570 3.2E-17 T 14-10-2018 IPR001633 EAL domain JV59_33060 80d00fa6b4889d199e50c31b9e0a1355 570 Gene3D G3DSA:3.20.20.450 344 570 4.8E-44 T 14-10-2018 IPR035919 EAL domain superfamily JV59_29650 565dd1b27fde1ee003be5447e54e9b7d 376 Gene3D G3DSA:1.20.1250.20 189 368 4.7E-16 T 14-10-2018 JV59_29650 565dd1b27fde1ee003be5447e54e9b7d 376 SUPERFAMILY SSF103473 4 366 2.88E-31 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_29650 565dd1b27fde1ee003be5447e54e9b7d 376 Gene3D G3DSA:1.20.1250.20 2 180 4.7E-15 T 14-10-2018 JV59_29650 565dd1b27fde1ee003be5447e54e9b7d 376 Pfam PF07690 Major Facilitator Superfamily 29 309 6.1E-19 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_16620 6cd6a7f7105c034f43c9128d6a663108 444 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 404 1.4E-44 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_16620 6cd6a7f7105c034f43c9128d6a663108 444 Pfam PF01554 MatE 22 182 6.0E-20 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_16620 6cd6a7f7105c034f43c9128d6a663108 444 Pfam PF01554 MatE 241 392 1.3E-16 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_16620 6cd6a7f7105c034f43c9128d6a663108 444 PIRSF PIRSF006603 1 443 6.4E-85 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_26955 892ba9afbb88e8158dfdc275eca7fbdd 154 Gene3D G3DSA:3.30.420.10 1 154 2.0E-59 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JV59_26955 892ba9afbb88e8158dfdc275eca7fbdd 154 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 36.042 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 JV59_26955 892ba9afbb88e8158dfdc275eca7fbdd 154 Pfam PF00075 RNase H 3 141 4.8E-53 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 JV59_26955 892ba9afbb88e8158dfdc275eca7fbdd 154 SUPERFAMILY SSF53098 3 143 8.47E-57 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily JV59_02300 a68abf83638d072f6a95ab65961d4756 334 SUPERFAMILY SSF143631 23 332 6.28E-101 T 14-10-2018 IPR003374 ApbE-like superfamily JV59_02300 a68abf83638d072f6a95ab65961d4756 334 Gene3D G3DSA:3.10.520.20 19 334 4.9E-113 T 14-10-2018 JV59_02300 a68abf83638d072f6a95ab65961d4756 334 Pfam PF02424 ApbE family 31 309 1.7E-85 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 JV59_02300 a68abf83638d072f6a95ab65961d4756 334 PIRSF PIRSF006268 1 334 1.4E-93 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 JV59_27630 e73433003da0b793d3e8d6771039b4b1 194 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JV59_27630 e73433003da0b793d3e8d6771039b4b1 194 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 187 1.7E-86 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 JV59_27630 e73433003da0b793d3e8d6771039b4b1 194 Gene3D G3DSA:1.10.15.40 38 81 5.1E-8 T 14-10-2018 JV59_27630 e73433003da0b793d3e8d6771039b4b1 194 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 166 26.158 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 JV59_27630 e73433003da0b793d3e8d6771039b4b1 194 SUPERFAMILY SSF54862 37 173 3.14E-31 T 14-10-2018 JV59_27630 e73433003da0b793d3e8d6771039b4b1 194 Pfam PF04060 Putative Fe-S cluster 44 75 1.0E-14 T 14-10-2018 IPR007202 4Fe-4S domain GO:0051536 JV59_27630 e73433003da0b793d3e8d6771039b4b1 194 PIRSF PIRSF005784 3 188 6.4E-86 T 14-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 JV59_27630 e73433003da0b793d3e8d6771039b4b1 194 Pfam PF14697 4Fe-4S dicluster domain 107 161 6.0E-18 T 14-10-2018 JV59_27630 e73433003da0b793d3e8d6771039b4b1 194 Gene3D G3DSA:3.30.70.20 82 180 2.4E-22 T 14-10-2018 JV59_30055 2b0630aa522bf266111d5d51ecfeff86 288 Pfam PF00106 short chain dehydrogenase 3 191 3.2E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_30055 2b0630aa522bf266111d5d51ecfeff86 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 1.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_30055 2b0630aa522bf266111d5d51ecfeff86 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 1.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_30055 2b0630aa522bf266111d5d51ecfeff86 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_30055 2b0630aa522bf266111d5d51ecfeff86 288 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JV59_30055 2b0630aa522bf266111d5d51ecfeff86 288 Gene3D G3DSA:3.40.50.720 2 282 1.6E-61 T 14-10-2018 JV59_30055 2b0630aa522bf266111d5d51ecfeff86 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.3E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_30055 2b0630aa522bf266111d5d51ecfeff86 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 4.3E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_30055 2b0630aa522bf266111d5d51ecfeff86 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 4.3E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_30055 2b0630aa522bf266111d5d51ecfeff86 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 4.3E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_30055 2b0630aa522bf266111d5d51ecfeff86 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 4.3E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_30055 2b0630aa522bf266111d5d51ecfeff86 288 SUPERFAMILY SSF51735 3 244 2.76E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_35395 55f8e34ba3ec8090673f12211bb0346c 261 SUPERFAMILY SSF88723 4 164 1.23E-38 T 14-10-2018 IPR029060 PIN-like domain superfamily JV59_35395 55f8e34ba3ec8090673f12211bb0346c 261 Gene3D G3DSA:1.10.150.20 167 255 3.5E-21 T 14-10-2018 JV59_35395 55f8e34ba3ec8090673f12211bb0346c 261 SMART SM00279 167 202 1.6E-8 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 JV59_35395 55f8e34ba3ec8090673f12211bb0346c 261 SUPERFAMILY SSF47807 164 258 1.09E-19 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily JV59_35395 55f8e34ba3ec8090673f12211bb0346c 261 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 256 2.9E-22 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 JV59_35395 55f8e34ba3ec8090673f12211bb0346c 261 SMART SM00475 3 254 4.2E-65 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 JV59_35395 55f8e34ba3ec8090673f12211bb0346c 261 Gene3D G3DSA:3.40.50.1010 1 166 9.9E-51 T 14-10-2018 JV59_35395 55f8e34ba3ec8090673f12211bb0346c 261 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 45.222 T 14-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 JV59_35395 55f8e34ba3ec8090673f12211bb0346c 261 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 147 3.7E-31 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 JV59_34935 be91eed23ea25d43922dd49e281960d5 206 SMART SM00382 26 206 9.3E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_34935 be91eed23ea25d43922dd49e281960d5 206 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_34935 be91eed23ea25d43922dd49e281960d5 206 Pfam PF00005 ABC transporter 18 159 5.5E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_34935 be91eed23ea25d43922dd49e281960d5 206 Gene3D G3DSA:3.40.50.300 1 200 1.2E-42 T 14-10-2018 JV59_34935 be91eed23ea25d43922dd49e281960d5 206 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 203 1.9E-76 T 14-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 JV59_34935 be91eed23ea25d43922dd49e281960d5 206 SUPERFAMILY SSF52540 2 196 7.72E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_25555 d91612e23a40f44aaf536734cf39e451 200 Gene3D G3DSA:3.90.870.10 1 196 4.2E-46 T 14-10-2018 JV59_25555 d91612e23a40f44aaf536734cf39e451 200 SUPERFAMILY SSF55821 2 194 3.89E-39 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily JV59_25555 d91612e23a40f44aaf536734cf39e451 200 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 3 192 4.7E-38 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JV59_35370 96888dda6bdfed31ed925294a3f885dd 181 Hamap MF_01104 Protein Syd [syd]. 3 181 35.604 T 14-10-2018 IPR009948 Syd GO:0009898 JV59_35370 96888dda6bdfed31ed925294a3f885dd 181 Pfam PF07348 Syd protein (SUKH-2) 7 179 9.5E-69 T 14-10-2018 IPR009948 Syd GO:0009898 JV59_35370 96888dda6bdfed31ed925294a3f885dd 181 Gene3D G3DSA:3.40.1580.20 1 181 1.1E-65 T 14-10-2018 IPR038228 Syd superfamily JV59_19025 5cd1f7de8200e580ea97e1415434418d 145 Gene3D G3DSA:1.10.3440.10 2 145 1.5E-5 T 14-10-2018 IPR023132 Sama2622-like superfamily JV59_19025 5cd1f7de8200e580ea97e1415434418d 145 Pfam PF11269 Protein of unknown function (DUF3069) 24 143 2.4E-51 T 14-10-2018 IPR021422 Protein of unknown function DUF3069 JV59_19025 5cd1f7de8200e580ea97e1415434418d 145 SUPERFAMILY SSF158675 1 144 4.97E-50 T 14-10-2018 IPR023132 Sama2622-like superfamily JV59_26860 d6db8a707d4bfae18f71f1e884c27414 127 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 1.9E-55 T 14-10-2018 IPR020911 Uncharacterised protein family UPF0325 JV59_26860 d6db8a707d4bfae18f71f1e884c27414 127 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 127 30.828 T 14-10-2018 IPR020911 Uncharacterised protein family UPF0325 JV59_26860 d6db8a707d4bfae18f71f1e884c27414 127 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 2.0E-63 T 14-10-2018 IPR020911 Uncharacterised protein family UPF0325 JV59_37985 87cddfbd744d0b90757debe80cb963ae 70 Gene3D G3DSA:1.10.10.610 1 70 5.8E-30 T 14-10-2018 IPR036685 YehU-like superfamily JV59_37985 87cddfbd744d0b90757debe80cb963ae 70 SUPERFAMILY SSF118001 1 70 6.28E-29 T 14-10-2018 IPR036685 YehU-like superfamily JV59_37985 87cddfbd744d0b90757debe80cb963ae 70 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 3.3E-34 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 JV59_37985 87cddfbd744d0b90757debe80cb963ae 70 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 24.662 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 JV59_37985 87cddfbd744d0b90757debe80cb963ae 70 PIRSF PIRSF006169 1 70 9.2E-36 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 JV59_37985 87cddfbd744d0b90757debe80cb963ae 70 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 64 1.0E-22 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 JV59_32915 c1b1abe1902a42e6b69387e216ae86a1 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 6.2E-28 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ JV59_17745 1cb86f4a0517039ac7e8fc7fbc3b44a0 446 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 380 404 1.7E-6 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat JV59_17745 1cb86f4a0517039ac7e8fc7fbc3b44a0 446 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 405 425 6.8E-4 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat JV59_17745 1cb86f4a0517039ac7e8fc7fbc3b44a0 446 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 230 254 1.8E-5 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat JV59_17745 1cb86f4a0517039ac7e8fc7fbc3b44a0 446 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 280 304 1.1E-7 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat JV59_17745 1cb86f4a0517039ac7e8fc7fbc3b44a0 446 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 130 153 9.3E-7 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat JV59_17745 1cb86f4a0517039ac7e8fc7fbc3b44a0 446 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 340 353 4.3E-5 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat JV59_17745 1cb86f4a0517039ac7e8fc7fbc3b44a0 446 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 105 128 1.4E-7 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat JV59_17745 1cb86f4a0517039ac7e8fc7fbc3b44a0 446 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 355 378 7.7E-6 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat JV59_17745 1cb86f4a0517039ac7e8fc7fbc3b44a0 446 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 155 179 6.7E-6 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat JV59_17745 1cb86f4a0517039ac7e8fc7fbc3b44a0 446 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 85 104 7.0E-5 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat JV59_17745 1cb86f4a0517039ac7e8fc7fbc3b44a0 446 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 305 328 5.4E-6 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat JV59_17745 1cb86f4a0517039ac7e8fc7fbc3b44a0 446 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 239 344 6.7E-39 T 14-10-2018 IPR005046 Protein of unknown function DUF285 JV59_17745 1cb86f4a0517039ac7e8fc7fbc3b44a0 446 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 69 169 1.0E-35 T 14-10-2018 IPR005046 Protein of unknown function DUF285 JV59_34630 1bbf9ded859844b28ee0d1b953ea82d3 180 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 28 6.7E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_34630 1bbf9ded859844b28ee0d1b953ea82d3 180 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 28 2.0E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_34630 1bbf9ded859844b28ee0d1b953ea82d3 180 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_34630 1bbf9ded859844b28ee0d1b953ea82d3 180 Gene3D G3DSA:3.30.700.10 9 92 2.6E-15 T 14-10-2018 JV59_34630 1bbf9ded859844b28ee0d1b953ea82d3 180 SUPERFAMILY SSF54523 9 147 1.1E-17 T 14-10-2018 JV59_16945 29c7dbdb3111a956670e404d5a59cb16 450 Gene3D G3DSA:3.30.420.40 379 433 4.9E-10 T 14-10-2018 JV59_16945 29c7dbdb3111a956670e404d5a59cb16 450 SUPERFAMILY SSF53067 1 204 7.12E-23 T 14-10-2018 JV59_16945 29c7dbdb3111a956670e404d5a59cb16 450 SUPERFAMILY SSF53067 208 446 8.46E-30 T 14-10-2018 JV59_16945 29c7dbdb3111a956670e404d5a59cb16 450 Pfam PF00012 Hsp70 protein 129 229 1.0E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_16945 29c7dbdb3111a956670e404d5a59cb16 450 Pfam PF00012 Hsp70 protein 338 430 6.6E-5 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JV59_16945 29c7dbdb3111a956670e404d5a59cb16 450 Gene3D G3DSA:3.90.640.10 335 378 4.9E-10 T 14-10-2018 JV59_27330 264ba49458be9e05177d797000fdd669 143 PIRSF PIRSF028687 1 143 2.8E-60 T 14-10-2018 IPR007293 Flagellar protein FlgP JV59_27330 264ba49458be9e05177d797000fdd669 143 Pfam PF02169 LPP20 lipoprotein 25 118 3.0E-8 T 14-10-2018 IPR024952 Lipoprotein LPP20-like JV59_28625 1d871f22aab1bf28b42a31a30cf0fc8c 147 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 144 1.0E-24 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 JV59_28625 1d871f22aab1bf28b42a31a30cf0fc8c 147 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 5 144 28.128 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 JV59_28625 1d871f22aab1bf28b42a31a30cf0fc8c 147 Gene3D G3DSA:3.30.420.270 63 136 1.4E-17 T 14-10-2018 JV59_32950 e4a31c60214c03a541ba3c1a406f285e 360 Pfam PF07433 Protein of unknown function (DUF1513) 66 358 3.8E-107 T 14-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 JV59_32950 e4a31c60214c03a541ba3c1a406f285e 360 Gene3D G3DSA:2.130.10.10 45 233 2.1E-6 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 JV59_32950 e4a31c60214c03a541ba3c1a406f285e 360 PIRSF PIRSF028101 1 360 7.2E-152 T 14-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 JV59_32950 e4a31c60214c03a541ba3c1a406f285e 360 SUPERFAMILY SSF50969 59 346 5.81E-15 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like JV59_27135 486d28f2a9c119eb6654fa9f560d0e65 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 2.8E-49 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 JV59_27135 486d28f2a9c119eb6654fa9f560d0e65 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 JV59_27135 486d28f2a9c119eb6654fa9f560d0e65 169 Gene3D G3DSA:2.70.70.10 9 169 8.0E-62 T 14-10-2018 IPR011055 Duplicated hybrid motif JV59_27135 486d28f2a9c119eb6654fa9f560d0e65 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 8.3E-50 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 JV59_27135 486d28f2a9c119eb6654fa9f560d0e65 169 SUPERFAMILY SSF51261 18 166 5.41E-55 T 14-10-2018 IPR011055 Duplicated hybrid motif JV59_17620 a967f622b7feb30b256df2221611f0ae 157 Pfam PF14316 Domain of unknown function (DUF4381) 11 144 7.2E-35 T 14-10-2018 IPR025489 Protein of unknown function (DUF4381 JV59_01220 9031c7cb5987c3aac270e46c7f9466d5 283 PRINTS PR00625 DnaJ domain signature 238 253 4.6E-10 T 14-10-2018 IPR001623 DnaJ domain JV59_01220 9031c7cb5987c3aac270e46c7f9466d5 283 PRINTS PR00625 DnaJ domain signature 220 238 4.6E-10 T 14-10-2018 IPR001623 DnaJ domain JV59_01220 9031c7cb5987c3aac270e46c7f9466d5 283 PRINTS PR00625 DnaJ domain signature 262 282 4.6E-10 T 14-10-2018 IPR001623 DnaJ domain JV59_01220 9031c7cb5987c3aac270e46c7f9466d5 283 SUPERFAMILY SSF158682 47 180 1.07E-22 T 14-10-2018 IPR029024 TerB-like JV59_01220 9031c7cb5987c3aac270e46c7f9466d5 283 Gene3D G3DSA:1.10.3680.10 43 190 5.3E-26 T 14-10-2018 IPR029024 TerB-like JV59_01220 9031c7cb5987c3aac270e46c7f9466d5 283 SUPERFAMILY SSF46565 137 279 5.34E-31 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JV59_01220 9031c7cb5987c3aac270e46c7f9466d5 283 Pfam PF00226 DnaJ domain 218 279 5.2E-12 T 14-10-2018 IPR001623 DnaJ domain JV59_01220 9031c7cb5987c3aac270e46c7f9466d5 283 Pfam PF05099 Tellurite resistance protein TerB 40 175 6.8E-16 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal JV59_01220 9031c7cb5987c3aac270e46c7f9466d5 283 SMART SM00271 217 282 1.2E-17 T 14-10-2018 IPR001623 DnaJ domain JV59_01220 9031c7cb5987c3aac270e46c7f9466d5 283 Gene3D G3DSA:1.10.287.110 194 282 8.4E-17 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JV59_01220 9031c7cb5987c3aac270e46c7f9466d5 283 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 283 39.746 T 14-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 JV59_23155 829ecf741a71e17f80540b19cc1b54e9 97 Gene3D G3DSA:3.30.750.24 3 92 3.6E-8 T 14-10-2018 IPR036513 STAS domain superfamily JV59_23155 829ecf741a71e17f80540b19cc1b54e9 97 SUPERFAMILY SSF52091 5 87 3.34E-10 T 14-10-2018 IPR036513 STAS domain superfamily JV59_23155 829ecf741a71e17f80540b19cc1b54e9 97 Pfam PF13466 STAS domain 5 82 2.2E-9 T 14-10-2018 IPR002645 STAS domain JV59_34465 338b24734a6d719c46baa366ad3fdebe 320 Gene3D G3DSA:3.40.50.300 2 164 4.7E-47 T 14-10-2018 JV59_34465 338b24734a6d719c46baa366ad3fdebe 320 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 206 315 1.6E-20 T 14-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_34465 338b24734a6d719c46baa366ad3fdebe 320 SUPERFAMILY SSF52540 4 190 2.21E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_34465 338b24734a6d719c46baa366ad3fdebe 320 SUPERFAMILY SSF48019 207 318 8.67E-17 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 JV59_34465 338b24734a6d719c46baa366ad3fdebe 320 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 197 6.4E-61 T 14-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JV59_34465 338b24734a6d719c46baa366ad3fdebe 320 Gene3D G3DSA:1.20.272.10 209 318 1.9E-6 T 14-10-2018 JV59_34465 338b24734a6d719c46baa366ad3fdebe 320 Pfam PF13177 DNA polymerase III, delta subunit 10 162 1.3E-44 T 14-10-2018 JV59_01995 24482fffe22d02641f59c8238b115572 196 SUPERFAMILY SSF53697 1 191 2.83E-56 T 14-10-2018 JV59_01995 24482fffe22d02641f59c8238b115572 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 34.043 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 JV59_01995 24482fffe22d02641f59c8238b115572 196 Pfam PF13580 SIS domain 9 144 1.1E-33 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 JV59_01995 24482fffe22d02641f59c8238b115572 196 Gene3D G3DSA:3.40.50.10490 1 195 7.6E-72 T 14-10-2018 JV59_18480 8f8522a7c1cf463ddfed17a8cb969577 385 SUPERFAMILY SSF55073 230 382 7.61E-50 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_18480 8f8522a7c1cf463ddfed17a8cb969577 385 Gene3D G3DSA:3.30.70.270 217 383 7.8E-57 T 14-10-2018 JV59_18480 8f8522a7c1cf463ddfed17a8cb969577 385 Pfam PF00990 Diguanylate cyclase, GGDEF domain 227 380 3.8E-46 T 14-10-2018 IPR000160 GGDEF domain JV59_18480 8f8522a7c1cf463ddfed17a8cb969577 385 SMART SM00267 214 384 2.9E-58 T 14-10-2018 IPR000160 GGDEF domain JV59_18480 8f8522a7c1cf463ddfed17a8cb969577 385 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 224 383 1.2E-52 T 14-10-2018 IPR000160 GGDEF domain JV59_30640 1206843103dd9c179b0f9064f3041cd5 156 Pfam PF09900 Predicted membrane protein (DUF2127) 8 145 4.3E-38 T 14-10-2018 IPR021125 Protein of unknown function DUF2127 JV59_28305 32d9ee64a3d51f80b898a9d5f639afe5 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 7.7E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JV59_28305 32d9ee64a3d51f80b898a9d5f639afe5 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 7.7E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JV59_28305 32d9ee64a3d51f80b898a9d5f639afe5 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 7.7E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JV59_28305 32d9ee64a3d51f80b898a9d5f639afe5 164 Gene3D G3DSA:2.40.100.10 1 164 1.6E-66 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily JV59_28305 32d9ee64a3d51f80b898a9d5f639afe5 164 PIRSF PIRSF001467 1 163 9.7E-29 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 JV59_28305 32d9ee64a3d51f80b898a9d5f639afe5 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 JV59_28305 32d9ee64a3d51f80b898a9d5f639afe5 164 SUPERFAMILY SSF50891 1 162 2.92E-58 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily JV59_28305 32d9ee64a3d51f80b898a9d5f639afe5 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 160 5.1E-48 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JV59_20110 9e342076348ef163917f0ecc2963e169 153 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.8E-4 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_20110 9e342076348ef163917f0ecc2963e169 153 SUPERFAMILY SSF46689 1 74 1.23E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_20110 9e342076348ef163917f0ecc2963e169 153 Gene3D G3DSA:1.10.357.10 1 153 2.4E-63 T 14-10-2018 JV59_40105 54e2fe815445ecd246f11cf1368812e1 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 7.2E-17 T 14-10-2018 IPR009525 Protein of unknown function DUF1145 JV59_17180 300ad1125dc961939e0477c09705ed65 83 Pfam PF11212 Protein of unknown function (DUF2999) 1 82 1.0E-45 T 14-10-2018 IPR021376 Protein of unknown function DUF2999 JV59_18780 b36f1bd4d4c85e50acfe34812ab0920b 245 Pfam PF06629 MltA-interacting protein MipA 33 243 2.6E-33 T 14-10-2018 IPR010583 MltA-interacting MipA JV59_31695 9cde82a5c54c41d9f9ce407d9a1c2d56 209 Pfam PF17516 ProQ C-terminal domain 160 208 2.0E-22 T 14-10-2018 IPR035236 RNA chaperone ProQ, C-terminal JV59_31695 9cde82a5c54c41d9f9ce407d9a1c2d56 209 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 209 29.86 T 14-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 JV59_31695 9cde82a5c54c41d9f9ce407d9a1c2d56 209 Gene3D G3DSA:1.10.1710.10 1 121 1.2E-23 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily JV59_31695 9cde82a5c54c41d9f9ce407d9a1c2d56 209 SMART SM00945 5 119 4.1E-61 T 14-10-2018 IPR016103 ProQ/FinO domain JV59_31695 9cde82a5c54c41d9f9ce407d9a1c2d56 209 Pfam PF04352 ProQ/FINO family 8 115 3.6E-42 T 14-10-2018 IPR016103 ProQ/FinO domain JV59_31695 9cde82a5c54c41d9f9ce407d9a1c2d56 209 SUPERFAMILY SSF48657 5 119 2.22E-38 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily JV59_01640 70bb719bfbdd6b7124b82c115825ba63 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 305 1.9E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_01640 70bb719bfbdd6b7124b82c115825ba63 341 Gene3D G3DSA:1.10.3720.10 93 303 1.2E-17 T 14-10-2018 IPR035906 MetI-like superfamily JV59_01640 70bb719bfbdd6b7124b82c115825ba63 341 SUPERFAMILY SSF161098 96 289 1.7E-20 T 14-10-2018 IPR035906 MetI-like superfamily JV59_18295 26a8b2c992fe2022a05b5f506dea1c32 500 Gene3D G3DSA:3.30.70.2150 234 343 1.6E-6 T 14-10-2018 JV59_18295 26a8b2c992fe2022a05b5f506dea1c32 500 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 30 221 6.1E-29 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal JV59_18295 26a8b2c992fe2022a05b5f506dea1c32 500 Gene3D G3DSA:2.70.50.50 30 224 2.6E-36 T 14-10-2018 JV59_18295 26a8b2c992fe2022a05b5f506dea1c32 500 SUPERFAMILY SSF81296 30 224 3.92E-31 T 14-10-2018 IPR014756 Immunoglobulin E-set JV59_23375 d336d78fa85aeaf7c98651b82f19c3f6 167 TIGRFAM TIGR03645 glyox_marine: lactoylglutathione lyase family protein 5 166 2.0E-105 T 14-10-2018 IPR019883 Lactoylglutathione lyase JV59_23375 d336d78fa85aeaf7c98651b82f19c3f6 167 Gene3D G3DSA:3.10.180.10 2 155 1.6E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_23375 d336d78fa85aeaf7c98651b82f19c3f6 167 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 152 1.7E-11 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JV59_23375 d336d78fa85aeaf7c98651b82f19c3f6 167 SUPERFAMILY SSF54593 6 157 1.61E-28 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_35805 fafb79299f0a5b441e10bbd61eb062bf 269 Gene3D G3DSA:3.30.1380.10 57 214 7.4E-19 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JV59_35805 fafb79299f0a5b441e10bbd61eb062bf 269 SUPERFAMILY SSF55166 53 216 5.18E-26 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JV59_35805 fafb79299f0a5b441e10bbd61eb062bf 269 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 124 214 9.7E-20 T 14-10-2018 IPR039561 Peptidase M15C GO:0008233 JV59_17345 0305cb1216c44013d86cc032f053df41 230 Gene3D G3DSA:3.10.129.10 79 229 1.1E-33 T 14-10-2018 JV59_17345 0305cb1216c44013d86cc032f053df41 230 Pfam PF01575 MaoC like domain 86 204 4.5E-20 T 14-10-2018 IPR002539 MaoC-like dehydratase domain JV59_17345 0305cb1216c44013d86cc032f053df41 230 SUPERFAMILY SSF54637 80 225 2.93E-28 T 14-10-2018 IPR029069 HotDog domain superfamily JV59_29125 dce05231eda14f67c6356ce6c006e151 98 Pfam PF03795 YCII-related domain 1 95 6.0E-30 T 14-10-2018 IPR005545 YCII-related JV59_29125 dce05231eda14f67c6356ce6c006e151 98 SUPERFAMILY SSF54909 1 98 8.22E-32 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_29125 dce05231eda14f67c6356ce6c006e151 98 Gene3D G3DSA:3.30.70.1060 1 98 9.1E-39 T 14-10-2018 JV59_25780 6e9d25fccab7d575d50e736da45af203 180 Pfam PF07700 Haem-NO-binding 3 160 1.6E-38 T 14-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 JV59_25780 6e9d25fccab7d575d50e736da45af203 180 SUPERFAMILY SSF111126 1 180 7.32E-50 T 14-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily JV59_25780 6e9d25fccab7d575d50e736da45af203 180 Gene3D G3DSA:3.90.1520.10 1 180 2.8E-62 T 14-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 JV59_40065 75e0b309793fee8ef8ff19739f86d65f 406 Gene3D G3DSA:1.20.1250.20 208 404 8.3E-10 T 14-10-2018 JV59_40065 75e0b309793fee8ef8ff19739f86d65f 406 SUPERFAMILY SSF103473 9 399 2.88E-31 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_40065 75e0b309793fee8ef8ff19739f86d65f 406 Pfam PF07690 Major Facilitator Superfamily 17 340 5.9E-19 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_40065 75e0b309793fee8ef8ff19739f86d65f 406 Gene3D G3DSA:1.20.1250.20 8 199 3.3E-13 T 14-10-2018 JV59_30105 b47bddcfb681d52d65861a26d0f9a67a 454 Pfam PF00367 phosphotransferase system, EIIB 13 43 1.3E-12 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 JV59_30105 b47bddcfb681d52d65861a26d0f9a67a 454 Gene3D G3DSA:3.30.1360.60 2 79 1.4E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 JV59_30105 b47bddcfb681d52d65861a26d0f9a67a 454 Pfam PF02378 Phosphotransferase system, EIIC 109 394 7.3E-30 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 JV59_30105 b47bddcfb681d52d65861a26d0f9a67a 454 SUPERFAMILY SSF55604 9 79 3.66E-17 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 JV59_24235 da2fa7a600715a2b9e30dd86929a0453 397 Pfam PF11301 Protein of unknown function (DUF3103) 41 396 1.8E-169 T 14-10-2018 IPR021452 Protein of unknown function DUF3103 JV59_37955 2a42520609619be6a49e092bb709f985 64 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 58 3.0E-32 T 14-10-2018 IPR012658 Conserved hypothetical protein CHP02443 JV59_37955 2a42520609619be6a49e092bb709f985 64 Pfam PF09526 Probable metal-binding protein (DUF2387) 1 50 2.4E-21 T 14-10-2018 IPR012658 Conserved hypothetical protein CHP02443 JV59_38130 ce0ae04ca6ae8cfc8f31bbba34399dd0 208 Pfam PF01914 MarC family integral membrane protein 3 204 4.5E-44 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 JV59_38130 ce0ae04ca6ae8cfc8f31bbba34399dd0 208 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 202 2.6E-40 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 JV59_35525 e602499d4c144293f9999a18bc9fce84 252 Gene3D G3DSA:3.40.1390.30 14 237 4.0E-82 T 14-10-2018 JV59_35525 e602499d4c144293f9999a18bc9fce84 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 238 1.8E-58 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 JV59_35525 e602499d4c144293f9999a18bc9fce84 252 SUPERFAMILY SSF102705 1 251 8.11E-82 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily JV59_35525 e602499d4c144293f9999a18bc9fce84 252 Gene3D G3DSA:3.40.1390.30 97 223 4.0E-82 T 14-10-2018 JV59_35525 e602499d4c144293f9999a18bc9fce84 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 251 8.8E-69 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 JV59_26900 47b0a81e2bc0d6c5f43d6672aeb01cfb 169 SMART SM00935 15 169 1.6E-40 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 JV59_26900 47b0a81e2bc0d6c5f43d6672aeb01cfb 169 Pfam PF03938 Outer membrane protein (OmpH-like) 13 168 3.6E-24 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 JV59_26900 47b0a81e2bc0d6c5f43d6672aeb01cfb 169 Gene3D G3DSA:3.30.910.20 25 169 3.1E-33 T 14-10-2018 IPR024930 Skp domain superfamily JV59_26900 47b0a81e2bc0d6c5f43d6672aeb01cfb 169 SUPERFAMILY SSF111384 26 168 3.4E-30 T 14-10-2018 JV59_28370 0a00906a11b17470a61217d2fc5db4b3 103 Pfam PF09413 Putative prokaryotic signal transducing protein 2 68 4.4E-8 T 14-10-2018 IPR018551 Domain of unknown function DUF2007 JV59_28370 0a00906a11b17470a61217d2fc5db4b3 103 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 78 97 - T 14-10-2018 IPR001876 Zinc finger, RanBP2-type JV59_01795 9d8dda854c3e62144f04e35139b1cde4 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 JV59_01795 9d8dda854c3e62144f04e35139b1cde4 337 Pfam PF01136 Peptidase family U32 77 336 3.9E-68 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 JV59_27250 aff124f9d21d9d6e4ebac81e8c9607fe 205 SUPERFAMILY SSF56925 22 205 2.88E-14 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JV59_27250 aff124f9d21d9d6e4ebac81e8c9607fe 205 Pfam PF13505 Outer membrane protein beta-barrel domain 7 191 3.1E-17 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel JV59_27250 aff124f9d21d9d6e4ebac81e8c9607fe 205 Gene3D G3DSA:2.40.160.20 21 205 3.7E-28 T 14-10-2018 JV59_39040 f11d2c6e97c57255d592ecb5d2a2debc 185 SUPERFAMILY SSF55821 2 181 2.93E-56 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily JV59_39040 f11d2c6e97c57255d592ecb5d2a2debc 185 Gene3D G3DSA:3.90.870.10 1 183 2.9E-62 T 14-10-2018 JV59_39040 f11d2c6e97c57255d592ecb5d2a2debc 185 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 4 185 8.1E-39 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 JV59_39040 f11d2c6e97c57255d592ecb5d2a2debc 185 Pfam PF01300 Telomere recombination 10 185 4.6E-49 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 JV59_39040 f11d2c6e97c57255d592ecb5d2a2debc 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 183 40.719 T 14-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 JV59_38665 f4f5403b2f1b0958e5ad4d30f5f547f7 224 SUPERFAMILY SSF47781 17 91 2.52E-10 T 14-10-2018 IPR010994 RuvA domain 2-like JV59_38665 f4f5403b2f1b0958e5ad4d30f5f547f7 224 SUPERFAMILY SSF102712 133 195 1.26E-5 T 14-10-2018 JV59_38665 f4f5403b2f1b0958e5ad4d30f5f547f7 224 Pfam PF04002 RadC-like JAB domain 104 222 8.6E-46 T 14-10-2018 IPR025657 RadC-like JAB domain JV59_38665 f4f5403b2f1b0958e5ad4d30f5f547f7 224 Gene3D G3DSA:3.40.140.10 101 224 3.4E-44 T 14-10-2018 JV59_38665 f4f5403b2f1b0958e5ad4d30f5f547f7 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site JV59_38665 f4f5403b2f1b0958e5ad4d30f5f547f7 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 1.3E-78 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 JV59_32545 d0774b9521482d6b60e25ae8670fe6b0 344 SUPERFAMILY SSF46565 289 341 4.45E-12 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JV59_32545 d0774b9521482d6b60e25ae8670fe6b0 344 SMART SM00671 32 67 1.9E-4 T 14-10-2018 IPR006597 Sel1-like repeat JV59_32545 d0774b9521482d6b60e25ae8670fe6b0 344 SMART SM00671 68 101 0.41 T 14-10-2018 IPR006597 Sel1-like repeat JV59_32545 d0774b9521482d6b60e25ae8670fe6b0 344 SMART SM00671 102 137 140.0 T 14-10-2018 IPR006597 Sel1-like repeat JV59_32545 d0774b9521482d6b60e25ae8670fe6b0 344 SUPERFAMILY SSF81901 17 148 4.97E-20 T 14-10-2018 JV59_32545 d0774b9521482d6b60e25ae8670fe6b0 344 Gene3D G3DSA:1.10.287.110 281 344 1.1E-11 T 14-10-2018 IPR036869 Chaperone J-domain superfamily JV59_32545 d0774b9521482d6b60e25ae8670fe6b0 344 Gene3D G3DSA:1.25.40.10 6 168 5.9E-27 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_32545 d0774b9521482d6b60e25ae8670fe6b0 344 Pfam PF08238 Sel1 repeat 68 100 0.043 T 14-10-2018 IPR006597 Sel1-like repeat JV59_32545 d0774b9521482d6b60e25ae8670fe6b0 344 Pfam PF08238 Sel1 repeat 33 67 6.5E-5 T 14-10-2018 IPR006597 Sel1-like repeat JV59_26805 27608c30710e75466aa7dc1faf69958b 247 Pfam PF11101 Protein of unknown function (DUF2884) 21 245 9.1E-69 T 14-10-2018 IPR021307 Protein of unknown function DUF2884 JV59_21875 f378dd884d39ae1e673327a1729684d7 213 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 204 1.3E-46 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 JV59_21875 f378dd884d39ae1e673327a1729684d7 213 Pfam PF01914 MarC family integral membrane protein 8 207 5.9E-51 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 JV59_00305 073916bb1e85f5a5c661a5747ed17ca8 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 38 467 2.9E-80 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 JV59_00305 073916bb1e85f5a5c661a5747ed17ca8 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 21 467 1.2E-47 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 JV59_24810 fb6b3f80a1171e4e291f137bcf389611 289 SUPERFAMILY SSF55729 13 268 1.07E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_39670 1deee9cd4cd98a032c8636956509424d 462 Pfam PF06969 HemN C-terminal domain 368 436 2.5E-10 T 14-10-2018 IPR010723 HemN, C-terminal JV59_39670 1deee9cd4cd98a032c8636956509424d 462 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 13 462 1.5E-208 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 JV59_39670 1deee9cd4cd98a032c8636956509424d 462 Gene3D G3DSA:1.10.10.920 369 462 7.5E-34 T 14-10-2018 JV59_39670 1deee9cd4cd98a032c8636956509424d 462 SUPERFAMILY SSF102114 11 449 6.67E-144 T 14-10-2018 JV59_39670 1deee9cd4cd98a032c8636956509424d 462 SMART SM00729 57 277 1.1E-54 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JV59_39670 1deee9cd4cd98a032c8636956509424d 462 Gene3D G3DSA:3.80.30.20 6 368 5.7E-138 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe JV59_39670 1deee9cd4cd98a032c8636956509424d 462 PIRSF PIRSF000167 8 459 3.5E-172 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 JV59_39670 1deee9cd4cd98a032c8636956509424d 462 Pfam PF04055 Radical SAM superfamily 62 232 5.0E-19 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JV59_19880 f643a76971cb9454ad9d42b4b2c04995 273 Gene3D G3DSA:3.40.190.10 37 268 7.4E-16 T 14-10-2018 JV59_19880 f643a76971cb9454ad9d42b4b2c04995 273 Gene3D G3DSA:3.40.190.10 116 226 7.4E-16 T 14-10-2018 JV59_19880 f643a76971cb9454ad9d42b4b2c04995 273 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 270 3.2E-15 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_19880 f643a76971cb9454ad9d42b4b2c04995 273 SUPERFAMILY SSF53850 22 271 6.72E-26 T 14-10-2018 JV59_39400 a970abb056ef6efa784d65890bc5deb7 175 Gene3D G3DSA:3.40.50.360 2 111 2.2E-11 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_39400 a970abb056ef6efa784d65890bc5deb7 175 SUPERFAMILY SSF52218 3 158 3.59E-30 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_39400 a970abb056ef6efa784d65890bc5deb7 175 Pfam PF12724 Flavodoxin domain 5 153 1.2E-51 T 14-10-2018 IPR026816 Flavodoxin domain JV59_17725 380a0101e456911a38f9785518a72a3b 244 SMART SM00052 1 238 5.1E-43 T 14-10-2018 IPR001633 EAL domain JV59_17725 380a0101e456911a38f9785518a72a3b 244 Gene3D G3DSA:3.20.20.450 2 243 2.3E-59 T 14-10-2018 IPR035919 EAL domain superfamily JV59_17725 380a0101e456911a38f9785518a72a3b 244 SUPERFAMILY SSF141868 7 241 6.15E-61 T 14-10-2018 IPR035919 EAL domain superfamily JV59_17725 380a0101e456911a38f9785518a72a3b 244 Pfam PF00563 EAL domain 8 233 7.8E-53 T 14-10-2018 IPR001633 EAL domain JV59_19810 47cd7a5dde6be1317cb63751db28dd65 537 SMART SM00990 437 536 3.6E-18 T 14-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 JV59_19810 47cd7a5dde6be1317cb63751db28dd65 537 Gene3D G3DSA:3.40.1350.10 463 537 1.9E-7 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 JV59_19810 47cd7a5dde6be1317cb63751db28dd65 537 Pfam PF08774 VRR-NUC domain 436 535 2.9E-23 T 14-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 JV59_26150 34fda324b618538cff6fb674f310f3ff 248 Pfam PF04338 Protein of unknown function, DUF481 33 248 1.3E-49 T 14-10-2018 IPR007433 Protein of unknown function DUF481 JV59_29235 960194344580780efbfa2acf23f84e9c 346 Gene3D G3DSA:3.20.20.70 1 346 9.1E-131 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_29235 960194344580780efbfa2acf23f84e9c 346 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 332 3.5E-89 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 JV59_29235 960194344580780efbfa2acf23f84e9c 346 SUPERFAMILY SSF51395 1 337 1.47E-113 T 14-10-2018 JV59_19240 0734d8acaa704f8930427573356ec93d 161 Pfam PF06496 Protein of unknown function (DUF1097) 9 141 8.7E-40 T 14-10-2018 IPR009476 Protein of unknown function DUF1097 JV59_01945 95ef53d564bd1947a0ff17b962e61392 152 Pfam PF06295 Protein of unknown function (DUF1043) 6 134 7.1E-42 T 14-10-2018 IPR009386 Protein of unknown function DUF1043 JV59_01945 95ef53d564bd1947a0ff17b962e61392 152 PIRSF PIRSF006318 1 140 1.7E-45 T 14-10-2018 IPR009386 Protein of unknown function DUF1043 JV59_30355 d6c725a38112ec6a6874b7ffbdb94248 290 Pfam PF00892 EamA-like transporter family 9 137 4.3E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_30355 d6c725a38112ec6a6874b7ffbdb94248 290 Pfam PF00892 EamA-like transporter family 147 278 2.0E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_30355 d6c725a38112ec6a6874b7ffbdb94248 290 SUPERFAMILY SSF103481 40 140 3.66E-12 T 14-10-2018 JV59_30355 d6c725a38112ec6a6874b7ffbdb94248 290 SUPERFAMILY SSF103481 184 283 1.1E-14 T 14-10-2018 JV59_21955 5df92218994d03928acf24e9ab0f7224 530 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 14-10-2018 IPR018093 BCCT transporter, conserved site JV59_21955 5df92218994d03928acf24e9ab0f7224 530 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 75 520 3.2E-135 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 JV59_21955 5df92218994d03928acf24e9ab0f7224 530 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 34 520 1.4E-171 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 JV59_27685 c921a3b2ea72960d09f68c2b281b9f21 261 SUPERFAMILY SSF117143 93 222 8.11E-37 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like JV59_27685 c921a3b2ea72960d09f68c2b281b9f21 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 3.3E-46 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G JV59_27685 c921a3b2ea72960d09f68c2b281b9f21 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 146 243 1.3E-33 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G JV59_27685 c921a3b2ea72960d09f68c2b281b9f21 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site JV59_27685 c921a3b2ea72960d09f68c2b281b9f21 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 2.3E-117 T 14-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 JV59_27685 c921a3b2ea72960d09f68c2b281b9f21 261 Pfam PF00460 Flagella basal body rod protein 5 35 4.6E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 JV59_27685 c921a3b2ea72960d09f68c2b281b9f21 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 258 6.7E-27 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JV59_38745 4bc12ba68fd56197f883afac6349647f 264 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 39 248 1.0E-85 T 14-10-2018 IPR014164 TonB-system energizer ExbB type-1 GO:0016020|GO:0022857|GO:0055085 JV59_38745 4bc12ba68fd56197f883afac6349647f 264 Pfam PF01618 MotA/TolQ/ExbB proton channel family 131 235 7.0E-34 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel JV59_20220 05dc6b445e1b9af8df2ea7ba20466bd9 435 ProSitePatterns PS00942 glpT family of transporters signature. 142 158 - T 14-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 JV59_20220 05dc6b445e1b9af8df2ea7ba20466bd9 435 SUPERFAMILY SSF103473 11 421 1.44E-79 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_20220 05dc6b445e1b9af8df2ea7ba20466bd9 435 PIRSF PIRSF002808 1 434 2.5E-142 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 JV59_20220 05dc6b445e1b9af8df2ea7ba20466bd9 435 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 27 404 1.8E-139 T 14-10-2018 JV59_20220 05dc6b445e1b9af8df2ea7ba20466bd9 435 Pfam PF07690 Major Facilitator Superfamily 27 387 2.4E-48 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_20220 05dc6b445e1b9af8df2ea7ba20466bd9 435 Gene3D G3DSA:1.20.1250.20 229 427 5.1E-43 T 14-10-2018 JV59_20220 05dc6b445e1b9af8df2ea7ba20466bd9 435 Gene3D G3DSA:1.20.1250.20 10 214 5.8E-51 T 14-10-2018 JV59_34445 c01bd42ecacec6572933823198db6b21 486 Pfam PF00209 Sodium:neurotransmitter symporter family 122 469 1.6E-76 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JV59_34445 c01bd42ecacec6572933823198db6b21 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 4.1E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JV59_34445 c01bd42ecacec6572933823198db6b21 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 4.1E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JV59_34445 c01bd42ecacec6572933823198db6b21 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 4.1E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JV59_34445 c01bd42ecacec6572933823198db6b21 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 4.1E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JV59_34445 c01bd42ecacec6572933823198db6b21 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 429 449 4.1E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JV59_34445 c01bd42ecacec6572933823198db6b21 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 4.1E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JV59_34445 c01bd42ecacec6572933823198db6b21 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 4.1E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JV59_34445 c01bd42ecacec6572933823198db6b21 486 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 JV59_34445 c01bd42ecacec6572933823198db6b21 486 SUPERFAMILY SSF161070 3 474 4.05E-148 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 JV59_18845 42d574347e68d8556eb893282994bd40 131 SUPERFAMILY SSF54593 2 130 4.97E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_18845 42d574347e68d8556eb893282994bd40 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 5.6E-14 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JV59_18845 42d574347e68d8556eb893282994bd40 131 Gene3D G3DSA:3.10.180.10 2 131 5.1E-35 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_30910 506c70799a0ac950389cb899020ad587 72 Pfam PF14354 Restriction alleviation protein Lar 2 47 3.4E-7 T 14-10-2018 JV59_26580 47f65d9d0a45d2d4b5769bb536f0c7a9 146 SUPERFAMILY SSF54523 12 142 4.08E-23 T 14-10-2018 JV59_26580 47f65d9d0a45d2d4b5769bb536f0c7a9 146 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 7.8E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_26580 47f65d9d0a45d2d4b5769bb536f0c7a9 146 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_26580 47f65d9d0a45d2d4b5769bb536f0c7a9 146 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 31 4.5E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_26580 47f65d9d0a45d2d4b5769bb536f0c7a9 146 Pfam PF00114 Pilin (bacterial filament) 41 133 6.9E-7 T 14-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 JV59_26580 47f65d9d0a45d2d4b5769bb536f0c7a9 146 Gene3D G3DSA:3.30.700.10 12 145 2.4E-28 T 14-10-2018 JV59_27195 74f47e7f1ca921a172bd56f7f906b837 244 Pfam PF07556 Protein of unknown function (DUF1538) 21 242 8.7E-72 T 14-10-2018 IPR011435 Protein of unknown function DUF1538 JV59_37055 9d93763e7493e2bcddd4cca8cc75daec 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 1.0E-62 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 JV59_37055 9d93763e7493e2bcddd4cca8cc75daec 164 SUPERFAMILY SSF55021 79 162 1.2E-26 T 14-10-2018 JV59_37055 9d93763e7493e2bcddd4cca8cc75daec 164 SUPERFAMILY SSF55021 2 75 1.09E-22 T 14-10-2018 JV59_37055 9d93763e7493e2bcddd4cca8cc75daec 164 Pfam PF13710 ACT domain 11 73 2.9E-18 T 14-10-2018 JV59_37055 9d93763e7493e2bcddd4cca8cc75daec 164 Gene3D G3DSA:3.30.70.1150 80 157 5.6E-28 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal JV59_37055 9d93763e7493e2bcddd4cca8cc75daec 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 2.0E-35 T 14-10-2018 JV59_37055 9d93763e7493e2bcddd4cca8cc75daec 164 Gene3D G3DSA:3.30.70.260 1 78 5.1E-33 T 14-10-2018 JV59_37055 9d93763e7493e2bcddd4cca8cc75daec 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 1.9E-25 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 JV59_29920 d3d3ba2acb20fcbc01ae254809afeac6 176 SUPERFAMILY SSF55729 2 171 3.54E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_29920 d3d3ba2acb20fcbc01ae254809afeac6 176 Pfam PF13302 Acetyltransferase (GNAT) domain 5 148 6.1E-20 T 14-10-2018 IPR000182 GNAT domain JV59_29920 d3d3ba2acb20fcbc01ae254809afeac6 176 Gene3D G3DSA:3.40.630.30 1 173 6.6E-35 T 14-10-2018 JV59_20770 2e557c416148f94682b6bee74c2796d6 754 Pfam PF11308 Glycosyl hydrolases related to GH101 family, GH129 383 708 2.4E-150 T 14-10-2018 IPR021459 Glycosyl hydrolases related to GH101 family, GHL1-GHL3 JV59_34205 765bf88491c34fa23ac9e13aa855390e 330 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 237 299 1.5E-4 T 14-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal JV59_34205 765bf88491c34fa23ac9e13aa855390e 330 Gene3D G3DSA:3.40.50.300 47 226 2.4E-22 T 14-10-2018 JV59_34205 765bf88491c34fa23ac9e13aa855390e 330 Pfam PF07728 AAA domain (dynein-related subfamily) 64 185 1.8E-10 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 JV59_34205 765bf88491c34fa23ac9e13aa855390e 330 Pfam PF12556 Cobaltochelatase CobS subunit N terminal 5 36 8.1E-12 T 14-10-2018 IPR025865 Cobaltochelatase subunit CobS N-terminal domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 JV59_34205 765bf88491c34fa23ac9e13aa855390e 330 SUPERFAMILY SSF52540 34 280 2.08E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_26585 76ae4b04b539fa5f282903fd45184458 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 140 9.5E-10 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 JV59_26585 76ae4b04b539fa5f282903fd45184458 148 SUPERFAMILY SSF57716 108 146 1.71E-9 T 14-10-2018 JV59_26585 76ae4b04b539fa5f282903fd45184458 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 29.879 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 JV59_26585 76ae4b04b539fa5f282903fd45184458 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site JV59_26585 76ae4b04b539fa5f282903fd45184458 148 Gene3D G3DSA:1.20.120.910 17 147 4.0E-35 T 14-10-2018 JV59_26585 76ae4b04b539fa5f282903fd45184458 148 SUPERFAMILY SSF109635 7 106 8.76E-37 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily JV59_26585 76ae4b04b539fa5f282903fd45184458 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 5.9E-51 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 JV59_17950 8988bbfaef4cc62024b8b0e9029132b9 308 Gene3D G3DSA:1.10.10.10 3 90 8.8E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_17950 8988bbfaef4cc62024b8b0e9029132b9 308 SUPERFAMILY SSF53850 89 295 7.78E-50 T 14-10-2018 JV59_17950 8988bbfaef4cc62024b8b0e9029132b9 308 Gene3D G3DSA:3.40.190.10 92 290 3.5E-71 T 14-10-2018 JV59_17950 8988bbfaef4cc62024b8b0e9029132b9 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_17950 8988bbfaef4cc62024b8b0e9029132b9 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_17950 8988bbfaef4cc62024b8b0e9029132b9 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_17950 8988bbfaef4cc62024b8b0e9029132b9 308 Pfam PF03466 LysR substrate binding domain 88 292 6.7E-46 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_17950 8988bbfaef4cc62024b8b0e9029132b9 308 SUPERFAMILY SSF46785 6 88 3.86E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_17950 8988bbfaef4cc62024b8b0e9029132b9 308 Gene3D G3DSA:3.40.190.10 163 263 3.5E-71 T 14-10-2018 JV59_17950 8988bbfaef4cc62024b8b0e9029132b9 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 1.6E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_33730 ead16bde8ea9df9fec6159a884007619 132 SUPERFAMILY SSF88697 2 122 4.1E-25 T 14-10-2018 IPR015947 PUA-like superfamily JV59_33730 ead16bde8ea9df9fec6159a884007619 132 SMART SM01022 5 99 3.0E-5 T 14-10-2018 IPR007374 ASCH domain JV59_33730 ead16bde8ea9df9fec6159a884007619 132 Pfam PF04266 ASCH domain 5 94 3.4E-7 T 14-10-2018 IPR007374 ASCH domain JV59_33730 ead16bde8ea9df9fec6159a884007619 132 Gene3D G3DSA:2.30.130.30 2 106 4.8E-7 T 14-10-2018 JV59_28510 f2ea18c0c1b560bbec75aa240555ce1d 258 Gene3D G3DSA:3.40.190.10 100 203 7.9E-15 T 14-10-2018 JV59_28510 f2ea18c0c1b560bbec75aa240555ce1d 258 Gene3D G3DSA:3.40.190.10 24 230 7.9E-15 T 14-10-2018 JV59_28510 f2ea18c0c1b560bbec75aa240555ce1d 258 SUPERFAMILY SSF53850 21 238 9.99E-25 T 14-10-2018 JV59_28510 f2ea18c0c1b560bbec75aa240555ce1d 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 239 8.9E-11 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_35060 839db689cea5fcd65a48ba1c346bc2f6 163 Pfam PF02674 Colicin V production protein 4 142 2.6E-36 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 JV59_26200 de580633343a10f6a8bbd3efdf1fc03d 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 23 181 2.3E-76 T 14-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ JV59_26200 de580633343a10f6a8bbd3efdf1fc03d 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 182 9.9E-89 T 14-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ JV59_26200 de580633343a10f6a8bbd3efdf1fc03d 183 Gene3D G3DSA:3.40.30.10 19 181 1.7E-5 T 14-10-2018 JV59_32860 e0e096a1d9af7b9a9ab6c541f8927ae2 118 Pfam PF07238 PilZ domain 6 101 9.3E-6 T 14-10-2018 IPR009875 PilZ domain GO:0035438 JV59_32860 e0e096a1d9af7b9a9ab6c541f8927ae2 118 Gene3D G3DSA:2.40.10.430 2 107 3.7E-5 T 14-10-2018 JV59_20400 4fe1c2ddafc86b6a51ab8645733c0214 249 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 240 6.9E-23 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JV59_20400 4fe1c2ddafc86b6a51ab8645733c0214 249 Gene3D G3DSA:3.40.190.10 32 238 9.5E-32 T 14-10-2018 JV59_20400 4fe1c2ddafc86b6a51ab8645733c0214 249 Gene3D G3DSA:3.40.190.10 106 203 9.5E-32 T 14-10-2018 JV59_20400 4fe1c2ddafc86b6a51ab8645733c0214 249 SUPERFAMILY SSF53850 22 240 2.41E-37 T 14-10-2018 JV59_01635 e3c784e676cdb7fd731a373c105be48e 327 SUPERFAMILY SSF52540 5 252 2.43E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_01635 e3c784e676cdb7fd731a373c105be48e 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 2.3E-22 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JV59_01635 e3c784e676cdb7fd731a373c105be48e 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_01635 e3c784e676cdb7fd731a373c105be48e 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 6.3E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JV59_01635 e3c784e676cdb7fd731a373c105be48e 327 Pfam PF00005 ABC transporter 26 181 1.3E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_01635 e3c784e676cdb7fd731a373c105be48e 327 Gene3D G3DSA:3.40.50.300 3 325 3.4E-89 T 14-10-2018 JV59_01635 e3c784e676cdb7fd731a373c105be48e 327 SMART SM00382 34 231 1.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_33770 5d7e486bc49f0f60e6d649a935c2095f 333 Gene3D G3DSA:2.40.128.140 20 331 1.4E-51 T 14-10-2018 IPR037107 Putative outer membrane protein superfamily JV59_33770 5d7e486bc49f0f60e6d649a935c2095f 333 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 28 330 1.6E-80 T 14-10-2018 IPR018707 Protein of unknown function DUF2219 JV59_28765 208f1c617f5d03e073805ad23551518f 208 Gene3D G3DSA:1.10.357.10 2 208 9.9E-55 T 14-10-2018 JV59_28765 208f1c617f5d03e073805ad23551518f 208 SUPERFAMILY SSF46689 4 74 3.85E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_28765 208f1c617f5d03e073805ad23551518f 208 SUPERFAMILY SSF48498 80 207 1.65E-40 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JV59_28765 208f1c617f5d03e073805ad23551518f 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.0E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_28765 208f1c617f5d03e073805ad23551518f 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 2.0E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_28765 208f1c617f5d03e073805ad23551518f 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 2.1E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_28765 208f1c617f5d03e073805ad23551518f 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JV59_18455 91a4e4da5121c84929f2bb3577206deb 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 1.4E-54 T 14-10-2018 JV59_18455 91a4e4da5121c84929f2bb3577206deb 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.2E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_18455 91a4e4da5121c84929f2bb3577206deb 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.2E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_18455 91a4e4da5121c84929f2bb3577206deb 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.2E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_18455 91a4e4da5121c84929f2bb3577206deb 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 1.2E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_18455 91a4e4da5121c84929f2bb3577206deb 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.2E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_18455 91a4e4da5121c84929f2bb3577206deb 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.2E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_18455 91a4e4da5121c84929f2bb3577206deb 252 SUPERFAMILY SSF51735 1 252 1.22E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_18455 91a4e4da5121c84929f2bb3577206deb 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JV59_18455 91a4e4da5121c84929f2bb3577206deb 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 0.0014 T 14-10-2018 JV59_18455 91a4e4da5121c84929f2bb3577206deb 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_18455 91a4e4da5121c84929f2bb3577206deb 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 3.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_18455 91a4e4da5121c84929f2bb3577206deb 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 3.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_18455 91a4e4da5121c84929f2bb3577206deb 252 Gene3D G3DSA:3.40.50.720 1 251 2.2E-71 T 14-10-2018 JV59_39140 3c1becd22c7d1014c6233a6771f1f768 328 Pfam PF11059 Protein of unknown function (DUF2860) 26 327 1.4E-112 T 14-10-2018 IPR016896 Protein of unknown function DUF2860 JV59_39140 3c1becd22c7d1014c6233a6771f1f768 328 SUPERFAMILY SSF56935 131 328 5.34E-5 T 14-10-2018 JV59_39140 3c1becd22c7d1014c6233a6771f1f768 328 PIRSF PIRSF028696 1 328 7.1E-118 T 14-10-2018 IPR016896 Protein of unknown function DUF2860 JV59_34710 3a06e0ffc5ba24806c35c7ee17a8dbc1 99 Gene3D G3DSA:1.10.150.280 25 98 6.4E-19 T 14-10-2018 JV59_34710 3a06e0ffc5ba24806c35c7ee17a8dbc1 99 Pfam PF12836 Helix-hairpin-helix motif 37 97 7.9E-20 T 14-10-2018 JV59_34710 3a06e0ffc5ba24806c35c7ee17a8dbc1 99 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 37 98 8.3E-24 T 14-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain JV59_34710 3a06e0ffc5ba24806c35c7ee17a8dbc1 99 SUPERFAMILY SSF47781 26 97 2.56E-23 T 14-10-2018 IPR010994 RuvA domain 2-like JV59_39710 c06e4f7386240fa1cb0183f4189fa56d 137 SUPERFAMILY SSF46626 60 133 7.79E-18 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_39710 c06e4f7386240fa1cb0183f4189fa56d 137 PRINTS PR00607 Class IE cytochrome C signature 123 134 1.6E-15 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 JV59_39710 c06e4f7386240fa1cb0183f4189fa56d 137 PRINTS PR00607 Class IE cytochrome C signature 69 80 1.6E-15 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 JV59_39710 c06e4f7386240fa1cb0183f4189fa56d 137 PRINTS PR00607 Class IE cytochrome C signature 108 120 1.6E-15 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 JV59_39710 c06e4f7386240fa1cb0183f4189fa56d 137 PRINTS PR00607 Class IE cytochrome C signature 80 90 1.6E-15 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 JV59_39710 c06e4f7386240fa1cb0183f4189fa56d 137 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 59 133 1.2E-15 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_39710 c06e4f7386240fa1cb0183f4189fa56d 137 Gene3D G3DSA:1.10.760.10 59 136 5.9E-32 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_25610 4ddb83551cb03aa3a9d0c09f6bc3b9f0 99 Pfam PF03992 Antibiotic biosynthesis monooxygenase 18 77 2.1E-12 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain JV59_25610 4ddb83551cb03aa3a9d0c09f6bc3b9f0 99 Gene3D G3DSA:3.30.70.100 1 93 1.4E-24 T 14-10-2018 JV59_25610 4ddb83551cb03aa3a9d0c09f6bc3b9f0 99 SUPERFAMILY SSF54909 4 87 1.26E-20 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_08970 8e2f67a6f4c64cae90931281acf2435d 206 Gene3D G3DSA:3.90.870.10 1 205 3.1E-70 T 14-10-2018 JV59_08970 8e2f67a6f4c64cae90931281acf2435d 206 SUPERFAMILY SSF55821 1 203 2.11E-65 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily JV59_08970 8e2f67a6f4c64cae90931281acf2435d 206 Pfam PF01300 Telomere recombination 23 198 2.4E-47 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 JV59_08970 8e2f67a6f4c64cae90931281acf2435d 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 1.3E-71 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 JV59_30805 99d57a30485b8e769bfd6c0890ae09d8 182 Pfam PF07811 TadE-like protein 13 54 6.5E-8 T 14-10-2018 IPR012495 TadE-like JV59_00195 b5edc28450ac861114fcf224f3f6ab11 115 SUPERFAMILY SSF55331 2 115 1.41E-34 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily JV59_00195 b5edc28450ac861114fcf224f3f6ab11 115 Gene3D G3DSA:3.30.429.10 1 115 5.7E-33 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily JV59_25595 40fe89e932b4af2137431b7dfb2f9487 136 Gene3D G3DSA:3.30.70.100 1 131 2.0E-36 T 14-10-2018 JV59_25595 40fe89e932b4af2137431b7dfb2f9487 136 Pfam PF04940 Sensors of blue-light using FAD 1 92 1.1E-29 T 14-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 JV59_25595 40fe89e932b4af2137431b7dfb2f9487 136 SMART SM01034 1 93 5.0E-39 T 14-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 JV59_25595 40fe89e932b4af2137431b7dfb2f9487 136 SUPERFAMILY SSF54975 1 131 3.27E-37 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 JV59_20050 ee54cbb9b5e5cb93c494c3d89caad3dd 81 Pfam PF03788 LrgA family 1 71 2.2E-11 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 JV59_39065 2ed4328f198b78f19a6df3c654fef0e0 371 Pfam PF02481 DNA recombination-mediator protein A 76 278 2.2E-78 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 JV59_39065 2ed4328f198b78f19a6df3c654fef0e0 371 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 77 286 3.7E-79 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 JV59_39065 2ed4328f198b78f19a6df3c654fef0e0 371 SUPERFAMILY SSF102405 81 287 3.92E-42 T 14-10-2018 JV59_39065 2ed4328f198b78f19a6df3c654fef0e0 371 Gene3D G3DSA:1.10.10.10 307 366 2.9E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_39065 2ed4328f198b78f19a6df3c654fef0e0 371 Gene3D G3DSA:3.40.50.450 1 291 3.3E-98 T 14-10-2018 JV59_31570 1082ef8da1e98c738981e92bfa5f0fae 190 SUPERFAMILY SSF52218 1 189 5.8E-48 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_31570 1082ef8da1e98c738981e92bfa5f0fae 190 Pfam PF02525 Flavodoxin-like fold 2 173 1.3E-35 T 14-10-2018 IPR003680 Flavodoxin-like fold JV59_31570 1082ef8da1e98c738981e92bfa5f0fae 190 Gene3D G3DSA:3.40.50.360 1 189 9.1E-43 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_02020 2a1db7649a1e637c7d93df71e5eec55c 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 19 102 16.867 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 JV59_02020 2a1db7649a1e637c7d93df71e5eec55c 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 20 102 1.7E-28 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 JV59_02020 2a1db7649a1e637c7d93df71e5eec55c 105 Pfam PF04999 Cell division protein FtsL 8 103 1.6E-36 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 JV59_39475 59f8dd0792f190c6991391330dc454ca 69 Gene3D G3DSA:3.10.20.30 4 69 4.4E-17 T 14-10-2018 IPR012675 Beta-grasp domain superfamily JV59_39475 59f8dd0792f190c6991391330dc454ca 69 Pfam PF02597 ThiS family 9 69 5.6E-11 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 JV59_39475 59f8dd0792f190c6991391330dc454ca 69 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 6 69 1.4E-15 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis JV59_39475 59f8dd0792f190c6991391330dc454ca 69 SUPERFAMILY SSF54285 4 69 4.65E-14 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp JV59_35135 25fbb6d3e3e0db029744408fd3698467 207 Pfam PF03458 UPF0126 domain 92 163 8.5E-20 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 JV59_35135 25fbb6d3e3e0db029744408fd3698467 207 Pfam PF03458 UPF0126 domain 5 76 5.3E-19 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 JV59_26730 a00c6afaa0788d210e1a701e9a8f879b 200 Pfam PF10144 Bacterial virulence factor haemolysin 6 151 5.6E-36 T 14-10-2018 IPR019305 Uncharacterised protein family Smp JV59_23975 043b436d2a4fb657e527a806fc0c5fe8 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 7.0E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_23975 043b436d2a4fb657e527a806fc0c5fe8 293 SUPERFAMILY SSF46785 5 112 1.86E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_23975 043b436d2a4fb657e527a806fc0c5fe8 293 Gene3D G3DSA:3.40.190.10 164 260 3.8E-59 T 14-10-2018 JV59_23975 043b436d2a4fb657e527a806fc0c5fe8 293 SUPERFAMILY SSF53850 91 291 6.36E-38 T 14-10-2018 JV59_23975 043b436d2a4fb657e527a806fc0c5fe8 293 Pfam PF03466 LysR substrate binding domain 89 289 9.0E-40 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_23975 043b436d2a4fb657e527a806fc0c5fe8 293 Gene3D G3DSA:1.10.10.10 1 86 1.6E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_23975 043b436d2a4fb657e527a806fc0c5fe8 293 Gene3D G3DSA:3.40.190.10 92 287 3.8E-59 T 14-10-2018 JV59_25600 dbc72922fd060d2c9f5c58a0090b9c90 71 SUPERFAMILY SSF55331 2 61 4.58E-15 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily JV59_25600 dbc72922fd060d2c9f5c58a0090b9c90 71 Gene3D G3DSA:3.30.429.10 1 68 1.3E-18 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily JV59_25600 dbc72922fd060d2c9f5c58a0090b9c90 71 Pfam PF01361 Tautomerase enzyme 2 57 4.9E-14 T 14-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 JV59_22910 063ad26790e8739e7bc01c83ff2772c6 428 Gene3D G3DSA:3.40.50.2300 144 384 1.6E-130 T 14-10-2018 JV59_22910 063ad26790e8739e7bc01c83ff2772c6 428 Gene3D G3DSA:3.40.50.2300 31 365 1.6E-130 T 14-10-2018 JV59_22910 063ad26790e8739e7bc01c83ff2772c6 428 Pfam PF13433 Periplasmic binding protein domain 29 398 2.8E-170 T 14-10-2018 JV59_22910 063ad26790e8739e7bc01c83ff2772c6 428 SUPERFAMILY SSF53822 28 400 4.04E-88 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_22910 063ad26790e8739e7bc01c83ff2772c6 428 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 29 394 8.3E-172 T 14-10-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like JV59_01320 b7d47561c2a0a0fde2db7cffec8f3fae 164 Gene3D G3DSA:3.30.70.560 2 155 4.2E-32 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 JV59_01320 b7d47561c2a0a0fde2db7cffec8f3fae 164 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 128 2.3E-29 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 JV59_01320 b7d47561c2a0a0fde2db7cffec8f3fae 164 SUPERFAMILY SSF55083 1 149 2.49E-36 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 JV59_01320 b7d47561c2a0a0fde2db7cffec8f3fae 164 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 128 8.1E-25 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 JV59_38950 2b10cc179461a502de70f033381dfd4c 213 Pfam PF11172 Protein of unknown function (DUF2959) 13 210 4.8E-89 T 14-10-2018 IPR021342 Protein of unknown function DUF2959 JV59_40165 9bf8d14f5442c76710c022b0528a798c 120 Gene3D G3DSA:1.10.3830.10 4 120 2.7E-38 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 JV59_40165 9bf8d14f5442c76710c022b0528a798c 120 Pfam PF01219 Prokaryotic diacylglycerol kinase 17 117 5.4E-36 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 JV59_26330 d0590eee74a3ef3d4833def4e8080420 344 SUPERFAMILY SSF48452 154 315 9.28E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_26330 d0590eee74a3ef3d4833def4e8080420 344 Pfam PF14559 Tetratricopeptide repeat 200 262 2.9E-6 T 14-10-2018 JV59_26330 d0590eee74a3ef3d4833def4e8080420 344 SMART SM00028 153 186 28.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_26330 d0590eee74a3ef3d4833def4e8080420 344 SMART SM00028 187 220 14.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_26330 d0590eee74a3ef3d4833def4e8080420 344 SMART SM00028 253 286 150.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_26330 d0590eee74a3ef3d4833def4e8080420 344 SMART SM00028 287 320 81.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JV59_26330 d0590eee74a3ef3d4833def4e8080420 344 Gene3D G3DSA:1.25.40.10 123 342 5.6E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_34785 1722ef7ef45d71c9962f1904f5d8f133 415 Gene3D G3DSA:3.40.190.10 24 371 6.6E-160 T 14-10-2018 JV59_34785 1722ef7ef45d71c9962f1904f5d8f133 415 SUPERFAMILY SSF53850 20 414 3.26E-61 T 14-10-2018 JV59_34785 1722ef7ef45d71c9962f1904f5d8f133 415 Gene3D G3DSA:3.40.190.10 139 396 6.6E-160 T 14-10-2018 JV59_34785 1722ef7ef45d71c9962f1904f5d8f133 415 Pfam PF01547 Bacterial extracellular solute-binding protein 60 288 3.2E-20 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein JV59_34655 374235645b30f6492649249ca04c5bf5 321 SUPERFAMILY SSF53822 43 275 7.81E-20 T 14-10-2018 IPR028082 Periplasmic binding protein-like I JV59_34655 374235645b30f6492649249ca04c5bf5 321 Gene3D G3DSA:3.40.50.2300 143 314 2.3E-103 T 14-10-2018 JV59_34655 374235645b30f6492649249ca04c5bf5 321 Pfam PF04392 ABC transporter substrate binding protein 29 321 2.6E-116 T 14-10-2018 IPR007487 ABC transporter, substrate-binding protein JV59_34655 374235645b30f6492649249ca04c5bf5 321 Gene3D G3DSA:3.40.50.2300 46 292 2.3E-103 T 14-10-2018 JV59_33000 e5986847de79efac84819f064e7885fe 192 SUPERFAMILY SSF55729 13 185 2.05E-40 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_33000 e5986847de79efac84819f064e7885fe 192 Pfam PF13302 Acetyltransferase (GNAT) domain 17 161 3.2E-19 T 14-10-2018 IPR000182 GNAT domain JV59_33000 e5986847de79efac84819f064e7885fe 192 Gene3D G3DSA:3.40.630.30 13 190 1.0E-45 T 14-10-2018 JV59_32770 36b96fd9553eb25a69ebdfea33ebce9a 345 SUPERFAMILY SSF51726 7 341 8.76E-71 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 JV59_32770 36b96fd9553eb25a69ebdfea33ebce9a 345 PIRSF PIRSF005632 1 344 5.2E-199 T 14-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit JV59_32770 36b96fd9553eb25a69ebdfea33ebce9a 345 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 2.0E-36 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 JV59_32770 36b96fd9553eb25a69ebdfea33ebce9a 345 Gene3D G3DSA:3.20.20.210 1 343 1.0E-137 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 JV59_20070 13992c32d127e37e92ad75e150357ba4 334 SMART SM00448 3 115 1.4E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_20070 13992c32d127e37e92ad75e150357ba4 334 Gene3D G3DSA:3.40.1550.10 139 328 2.0E-30 T 14-10-2018 IPR028976 CheC-like superfamily JV59_20070 13992c32d127e37e92ad75e150357ba4 334 Pfam PF00072 Response regulator receiver domain 5 115 1.6E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JV59_20070 13992c32d127e37e92ad75e150357ba4 334 SUPERFAMILY SSF52172 4 123 2.7E-27 T 14-10-2018 IPR011006 CheY-like superfamily JV59_20070 13992c32d127e37e92ad75e150357ba4 334 SUPERFAMILY SSF103039 140 329 3.66E-38 T 14-10-2018 IPR028976 CheC-like superfamily JV59_20070 13992c32d127e37e92ad75e150357ba4 334 Gene3D G3DSA:3.40.50.2300 3 128 8.6E-27 T 14-10-2018 JV59_26195 2225e1df376e61cdd247a902f941ecbc 99 Pfam PF10795 Protein of unknown function (DUF2607) 7 95 2.9E-22 T 14-10-2018 IPR019731 Protein of unknown function DUF2607 JV59_35190 22a697c27fc2d1d83193a023297e9130 351 SUPERFAMILY SSF101801 250 325 6.41E-14 T 14-10-2018 IPR036429 SpoA-like superfamily JV59_35190 22a697c27fc2d1d83193a023297e9130 351 SUPERFAMILY SSF103039 4 232 6.54E-21 T 14-10-2018 IPR028976 CheC-like superfamily JV59_35190 22a697c27fc2d1d83193a023297e9130 351 PRINTS PR00955 Flagellar motor switch protein FliM signature 90 106 1.0E-18 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JV59_35190 22a697c27fc2d1d83193a023297e9130 351 PRINTS PR00955 Flagellar motor switch protein FliM signature 115 134 1.0E-18 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JV59_35190 22a697c27fc2d1d83193a023297e9130 351 PRINTS PR00955 Flagellar motor switch protein FliM signature 213 231 1.0E-18 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JV59_35190 22a697c27fc2d1d83193a023297e9130 351 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 1.0E-18 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JV59_35190 22a697c27fc2d1d83193a023297e9130 351 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 321 7.2E-121 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JV59_35190 22a697c27fc2d1d83193a023297e9130 351 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 252 321 8.0E-18 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) JV59_35190 22a697c27fc2d1d83193a023297e9130 351 PIRSF PIRSF002888 1 330 4.9E-93 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JV59_35190 22a697c27fc2d1d83193a023297e9130 351 Pfam PF02154 Flagellar motor switch protein FliM 39 231 7.6E-83 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JV59_35190 22a697c27fc2d1d83193a023297e9130 351 Gene3D G3DSA:3.40.1550.10 45 232 1.7E-55 T 14-10-2018 IPR028976 CheC-like superfamily JV59_34075 d9b175d073eb875f22c7eed654f2eb8d 234 SMART SM00382 35 222 1.8E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_34075 d9b175d073eb875f22c7eed654f2eb8d 234 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_34075 d9b175d073eb875f22c7eed654f2eb8d 234 Gene3D G3DSA:3.40.50.300 4 232 6.9E-72 T 14-10-2018 JV59_34075 d9b175d073eb875f22c7eed654f2eb8d 234 SUPERFAMILY SSF52540 6 226 2.8E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_34075 d9b175d073eb875f22c7eed654f2eb8d 234 Pfam PF00005 ABC transporter 26 174 3.7E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_29560 700f95c6483cda5a277cd37ccbaa5a18 222 SUPERFAMILY SSF100950 10 221 4.47E-68 T 14-10-2018 IPR037171 NagB/RpiA transferase-like JV59_29560 700f95c6483cda5a277cd37ccbaa5a18 222 SMART SM00882 11 206 1.6E-58 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 JV59_29560 700f95c6483cda5a277cd37ccbaa5a18 222 Pfam PF01144 Coenzyme A transferase 12 197 5.5E-34 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 JV59_29560 700f95c6483cda5a277cd37ccbaa5a18 222 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 10 213 9.4E-89 T 14-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 JV59_29560 700f95c6483cda5a277cd37ccbaa5a18 222 Gene3D G3DSA:3.40.1080.10 5 218 7.3E-91 T 14-10-2018 JV59_17985 af411fc950953892327ada1d26491694 460 SUPERFAMILY SSF53383 57 451 4.9E-104 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_17985 af411fc950953892327ada1d26491694 460 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 267 304 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JV59_17985 af411fc950953892327ada1d26491694 460 Gene3D G3DSA:3.40.640.10 89 350 7.1E-118 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_17985 af411fc950953892327ada1d26491694 460 Pfam PF00202 Aminotransferase class-III 55 451 4.7E-85 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JV59_17985 af411fc950953892327ada1d26491694 460 Gene3D G3DSA:3.90.1150.10 61 446 7.1E-118 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_17985 af411fc950953892327ada1d26491694 460 PIRSF PIRSF000521 150 454 9.8E-20 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JV59_17985 af411fc950953892327ada1d26491694 460 PIRSF PIRSF000521 9 156 5.8E-6 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JV59_24045 1e738af0f8d675f94f050771e08e9bbe 220 Gene3D G3DSA:3.10.620.30 21 211 5.6E-74 T 14-10-2018 JV59_24045 1e738af0f8d675f94f050771e08e9bbe 220 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 57 163 4.2E-13 T 14-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted JV59_33015 e0c7e5af1f5977108024be4ceafc5b00 458 Pfam PF04317 YcjX-like family, DUF463 20 457 4.1E-185 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein JV59_33015 e0c7e5af1f5977108024be4ceafc5b00 458 SUPERFAMILY SSF52540 1 47 6.74E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_33015 e0c7e5af1f5977108024be4ceafc5b00 458 PIRSF PIRSF019381 1 458 2.7E-197 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein JV59_38615 0d06ab9b91138a906df5f2a09c02a22c 249 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 2 176 4.1E-31 T 14-10-2018 IPR002654 Glycosyl transferase, family 25 JV59_32300 36504cb621080cd8e0bc6ab3530072e0 495 Pfam PF05136 Phage portal protein, lambda family 50 370 3.1E-55 T 14-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 JV59_32300 36504cb621080cd8e0bc6ab3530072e0 495 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 55 472 1.7E-66 T 14-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 JV59_34320 af832130993e2f6a27fa20de3b5ff900 307 Pfam PF03601 Conserved hypothetical protein 698 27 288 1.3E-52 T 14-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 JV59_31395 8d8edd78a53eb0634dc6c8809d533290 613 Pfam PF03055 Retinal pigment epithelial membrane protein 50 571 3.5E-21 T 14-10-2018 IPR004294 Carotenoid oxygenase GO:0016702|GO:0055114 JV59_33850 de1cf606f39568953c6fcfb9018183bc 402 Pfam PF02687 FtsX-like permease family 296 395 1.6E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JV59_33850 de1cf606f39568953c6fcfb9018183bc 402 Pfam PF12704 MacB-like periplasmic core domain 29 203 1.3E-12 T 14-10-2018 IPR025857 MacB-like periplasmic core domain JV59_33850 de1cf606f39568953c6fcfb9018183bc 402 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 402 8.8E-132 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 JV59_21930 ae0285f6567b8429f84655067fd40d96 116 Pfam PF13642 protein structure with unknown function 15 112 1.6E-26 T 14-10-2018 IPR025284 Protein of unknown function DUF4144 JV59_21930 ae0285f6567b8429f84655067fd40d96 116 Gene3D G3DSA:2.40.10.320 4 69 6.0E-8 T 14-10-2018 JV59_27795 61cec85222dd3adf01d9d40212df1289 252 Pfam PF00813 FliP family 55 247 1.4E-74 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_27795 61cec85222dd3adf01d9d40212df1289 252 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 228 240 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_27795 61cec85222dd3adf01d9d40212df1289 252 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 180 195 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_27795 61cec85222dd3adf01d9d40212df1289 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 111 123 3.5E-14 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JV59_27795 61cec85222dd3adf01d9d40212df1289 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 123 137 3.5E-14 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JV59_27795 61cec85222dd3adf01d9d40212df1289 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 241 251 3.5E-14 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JV59_27795 61cec85222dd3adf01d9d40212df1289 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 51 60 3.5E-14 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JV59_27795 61cec85222dd3adf01d9d40212df1289 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 173 185 3.5E-14 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JV59_27795 61cec85222dd3adf01d9d40212df1289 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 151 163 3.5E-14 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JV59_27795 61cec85222dd3adf01d9d40212df1289 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 180 200 6.7E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_27795 61cec85222dd3adf01d9d40212df1289 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 72 92 6.7E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_27795 61cec85222dd3adf01d9d40212df1289 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 92 111 6.7E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_27795 61cec85222dd3adf01d9d40212df1289 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 53 72 6.7E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_27795 61cec85222dd3adf01d9d40212df1289 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 225 250 6.7E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_27795 61cec85222dd3adf01d9d40212df1289 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 201 222 6.7E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JV59_27795 61cec85222dd3adf01d9d40212df1289 252 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 55 251 7.9E-76 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JV59_29965 8890aaeff5cfc48b04f22381b37fc09b 124 Pfam PF04237 YjbR 12 103 8.9E-15 T 14-10-2018 IPR007351 Uncharacterised protein YjbR JV59_29965 8890aaeff5cfc48b04f22381b37fc09b 124 Gene3D G3DSA:3.90.1150.30 1 123 8.6E-14 T 14-10-2018 IPR038056 YjbR-like superfamily JV59_29965 8890aaeff5cfc48b04f22381b37fc09b 124 SUPERFAMILY SSF142906 1 118 3.27E-31 T 14-10-2018 IPR038056 YjbR-like superfamily JV59_39585 5b19aa3c307bed183c4bee037fb871fb 301 SUPERFAMILY SSF103481 46 144 4.84E-12 T 14-10-2018 JV59_39585 5b19aa3c307bed183c4bee037fb871fb 301 Pfam PF00892 EamA-like transporter family 9 141 1.6E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_39585 5b19aa3c307bed183c4bee037fb871fb 301 Pfam PF00892 EamA-like transporter family 155 286 7.1E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_39585 5b19aa3c307bed183c4bee037fb871fb 301 SUPERFAMILY SSF103481 189 287 8.24E-9 T 14-10-2018 JV59_30780 59d84ef9d18059f08619e35b7a6670fa 262 Pfam PF04116 Fatty acid hydroxylase superfamily 88 224 9.2E-28 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 JV59_19940 a6d571b17e81ea81417e822b7ad8ed72 172 SUPERFAMILY SSF55811 22 142 2.17E-21 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JV59_19940 a6d571b17e81ea81417e822b7ad8ed72 172 Pfam PF00293 NUDIX domain 23 143 9.3E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JV59_19940 a6d571b17e81ea81417e822b7ad8ed72 172 Gene3D G3DSA:3.90.79.10 13 150 1.4E-25 T 14-10-2018 JV59_19940 a6d571b17e81ea81417e822b7ad8ed72 172 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JV59_21850 406edf7b3c0411a1ec2e81bde0f68499 663 SUPERFAMILY SSF50998 174 569 2.35E-5 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily JV59_18165 caa32091f1d10e9304fc5d9bc244f28d 525 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 14-10-2018 IPR018093 BCCT transporter, conserved site JV59_18165 caa32091f1d10e9304fc5d9bc244f28d 525 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 520 9.3E-137 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 JV59_18165 caa32091f1d10e9304fc5d9bc244f28d 525 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 3.9E-173 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 JV59_33760 ae6f42bcc4332ad9172c46371f9662f0 515 Pfam PF11840 Protein of unknown function (DUF3360) 11 514 8.0E-265 T 14-10-2018 IPR021794 Protein of unknown function DUF3360 JV59_32980 df8997d368ec74e06d669b1324046a77 323 Gene3D G3DSA:3.30.70.270 130 304 8.0E-44 T 14-10-2018 JV59_32980 df8997d368ec74e06d669b1324046a77 323 Pfam PF00990 Diguanylate cyclase, GGDEF domain 144 297 6.3E-36 T 14-10-2018 IPR000160 GGDEF domain JV59_32980 df8997d368ec74e06d669b1324046a77 323 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 141 300 7.4E-38 T 14-10-2018 IPR000160 GGDEF domain JV59_32980 df8997d368ec74e06d669b1324046a77 323 SUPERFAMILY SSF55073 147 302 8.63E-38 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_32980 df8997d368ec74e06d669b1324046a77 323 SMART SM00267 131 301 1.1E-35 T 14-10-2018 IPR000160 GGDEF domain JV59_30390 af60ac3fccbd447acc7c269e5726ec92 185 Pfam PF01618 MotA/TolQ/ExbB proton channel family 74 174 6.8E-23 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel JV59_05010 6d21091c5468cfcd0ba66cddfa822723 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 1.2E-111 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 JV59_05010 6d21091c5468cfcd0ba66cddfa822723 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.144 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 JV59_05010 6d21091c5468cfcd0ba66cddfa822723 327 SUPERFAMILY SSF55681 92 327 1.28E-82 T 14-10-2018 JV59_05010 6d21091c5468cfcd0ba66cddfa822723 327 Gene3D G3DSA:3.30.930.10 8 327 8.5E-127 T 14-10-2018 JV59_05010 6d21091c5468cfcd0ba66cddfa822723 327 SUPERFAMILY SSF46589 14 99 1.36E-22 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 JV59_05010 6d21091c5468cfcd0ba66cddfa822723 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 4.3E-26 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 JV59_05010 6d21091c5468cfcd0ba66cddfa822723 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 1.3E-106 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 JV59_23400 2bfdfa16c1d2d5c5b157831a8e69983f 266 SUPERFAMILY SSF161098 68 253 3.53E-31 T 14-10-2018 IPR035906 MetI-like superfamily JV59_23400 2bfdfa16c1d2d5c5b157831a8e69983f 266 Gene3D G3DSA:1.10.3720.10 66 260 7.1E-25 T 14-10-2018 IPR035906 MetI-like superfamily JV59_23400 2bfdfa16c1d2d5c5b157831a8e69983f 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 258 8.9E-32 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_25410 af82088d2e2a99c098628bbe7738d658 111 SUPERFAMILY SSF47413 17 75 3.56E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_25410 af82088d2e2a99c098628bbe7738d658 111 Gene3D G3DSA:1.10.260.40 2 84 3.2E-8 T 14-10-2018 JV59_19595 09a7c5aed6b20c7dd6e8fc2ec7af623c 594 Gene3D G3DSA:3.40.50.1820 228 514 5.4E-9 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_19595 09a7c5aed6b20c7dd6e8fc2ec7af623c 594 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 55 584 6.0E-255 T 14-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 JV59_19595 09a7c5aed6b20c7dd6e8fc2ec7af623c 594 SUPERFAMILY SSF53474 225 513 6.15E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_19595 09a7c5aed6b20c7dd6e8fc2ec7af623c 594 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 95 266 2.2E-74 T 14-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 JV59_22300 6aa8175d40d5a6eabbcaabaf32df6266 281 Pfam PF00892 EamA-like transporter family 148 276 4.0E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_22300 6aa8175d40d5a6eabbcaabaf32df6266 281 SUPERFAMILY SSF103481 183 278 1.24E-12 T 14-10-2018 JV59_18810 787617ccdafc0fbee00770fbaa09f3e7 131 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 38 114 1.5E-9 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 JV59_18810 787617ccdafc0fbee00770fbaa09f3e7 131 SUPERFAMILY SSF51316 10 130 2.2E-31 T 14-10-2018 IPR011057 Mss4-like superfamily JV59_18810 787617ccdafc0fbee00770fbaa09f3e7 131 Gene3D G3DSA:2.170.150.70 15 131 4.1E-37 T 14-10-2018 JV59_24725 92ce43d2ee3e38d0362d6edaf7a1f913 179 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 1.4E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_24725 92ce43d2ee3e38d0362d6edaf7a1f913 179 Gene3D G3DSA:1.10.357.10 1 178 3.2E-30 T 14-10-2018 JV59_24725 92ce43d2ee3e38d0362d6edaf7a1f913 179 SUPERFAMILY SSF46689 2 63 1.03E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_24725 92ce43d2ee3e38d0362d6edaf7a1f913 179 SUPERFAMILY SSF48498 77 171 7.47E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JV59_24725 92ce43d2ee3e38d0362d6edaf7a1f913 179 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 4.2E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_24725 92ce43d2ee3e38d0362d6edaf7a1f913 179 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 4.2E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_21440 f9e8c109988ab48419aa8a0d3a124739 405 Pfam PF07690 Major Facilitator Superfamily 15 360 1.5E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_21440 f9e8c109988ab48419aa8a0d3a124739 405 Gene3D G3DSA:1.20.1250.20 7 397 1.0E-50 T 14-10-2018 JV59_21440 f9e8c109988ab48419aa8a0d3a124739 405 SUPERFAMILY SSF103473 10 400 3.92E-55 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_22115 e6d43982a39d1c6fa90020ffd525280b 279 Pfam PF13649 Methyltransferase domain 71 166 1.4E-15 T 14-10-2018 JV59_22115 e6d43982a39d1c6fa90020ffd525280b 279 SUPERFAMILY SSF53335 50 279 9.34E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_22115 e6d43982a39d1c6fa90020ffd525280b 279 Gene3D G3DSA:3.40.50.150 17 264 1.2E-24 T 14-10-2018 JV59_22115 e6d43982a39d1c6fa90020ffd525280b 279 ProSitePatterns PS00221 MIP family signature. 37 45 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 JV59_22320 23bdfdcf8b5e7d34e1e7f3d64b5340a2 248 Pfam PF05742 Transport and Golgi organisation 2 1 125 3.3E-8 T 14-10-2018 IPR008551 Transport and Golgi organisation protein 2 JV59_17765 9a7da41e8786272378a2c2abb37243ea 402 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 399 1.1E-71 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 JV59_17765 9a7da41e8786272378a2c2abb37243ea 402 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 399 3.5E-138 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 JV59_17765 9a7da41e8786272378a2c2abb37243ea 402 Pfam PF07670 Nucleoside recognition 90 185 2.9E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 JV59_17765 9a7da41e8786272378a2c2abb37243ea 402 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.0E-24 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 JV59_29275 f33d003c159dbce1e476cdb2f412974a 347 Pfam PF03235 Protein of unknown function DUF262 27 226 1.4E-8 T 14-10-2018 IPR004919 Domain of unknown function DUF262 JV59_33895 6ffa92078c71828bcc057a7ff886ad2a 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 187 1.1E-74 T 14-10-2018 IPR014094 Penicillin-binding protein activator LpoB JV59_33895 6ffa92078c71828bcc057a7ff886ad2a 196 Gene3D G3DSA:3.40.50.10610 39 188 8.7E-44 T 14-10-2018 JV59_33895 6ffa92078c71828bcc057a7ff886ad2a 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 41 185 1.2E-54 T 14-10-2018 IPR014094 Penicillin-binding protein activator LpoB JV59_37425 aac3ee9bf919160fb9c1dd3f7f7c7021 421 Gene3D G3DSA:3.65.10.10 12 414 1.1E-170 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 JV59_37425 aac3ee9bf919160fb9c1dd3f7f7c7021 421 Gene3D G3DSA:3.65.10.10 22 229 1.1E-170 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 JV59_37425 aac3ee9bf919160fb9c1dd3f7f7c7021 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 43.977 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JV59_37425 aac3ee9bf919160fb9c1dd3f7f7c7021 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 407 1.7E-122 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 JV59_37425 aac3ee9bf919160fb9c1dd3f7f7c7021 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 8.5E-184 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JV59_37425 aac3ee9bf919160fb9c1dd3f7f7c7021 421 SUPERFAMILY SSF55205 4 418 1.8E-142 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 JV59_20290 76c3abd08d97f053cc8bfa53a18955b7 383 Pfam PF01966 HD domain 186 321 8.2E-17 T 14-10-2018 IPR006674 HD domain JV59_20290 76c3abd08d97f053cc8bfa53a18955b7 383 SUPERFAMILY SSF109604 175 361 1.07E-32 T 14-10-2018 JV59_20290 76c3abd08d97f053cc8bfa53a18955b7 383 Gene3D G3DSA:1.10.3210.10 159 375 1.9E-61 T 14-10-2018 JV59_20290 76c3abd08d97f053cc8bfa53a18955b7 383 SMART SM00471 180 331 2.3E-8 T 14-10-2018 IPR003607 HD/PDEase domain JV59_33425 0ec53422bcd45bbf696e9766344a338c 210 Pfam PF10816 Domain of unknown function (DUF2760) 87 209 4.6E-54 T 14-10-2018 IPR021212 Domain of unknown function DUF2760 JV59_34185 2d519fd7af1145a020c1be641104d8d1 141 Gene3D G3DSA:3.10.450.50 3 133 2.2E-29 T 14-10-2018 JV59_34185 2d519fd7af1145a020c1be641104d8d1 141 Pfam PF12680 SnoaL-like domain 22 125 1.9E-22 T 14-10-2018 IPR037401 SnoaL-like domain JV59_34185 2d519fd7af1145a020c1be641104d8d1 141 SUPERFAMILY SSF54427 19 136 3.59E-29 T 14-10-2018 IPR032710 NTF2-like domain superfamily JV59_37975 314641d08c3c2cda7e0e436d0144dd4b 158 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 119 4.4E-37 T 14-10-2018 IPR012659 Conserved hypothetical protein CHP02444 JV59_37975 314641d08c3c2cda7e0e436d0144dd4b 158 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 1.0E-27 T 14-10-2018 IPR012659 Conserved hypothetical protein CHP02444 JV59_37160 b6311e3eff83de0457590b92828a55ad 135 Gene3D G3DSA:3.10.180.10 8 134 5.4E-40 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_37160 b6311e3eff83de0457590b92828a55ad 135 SUPERFAMILY SSF54593 1 131 4.37E-35 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JV59_37160 b6311e3eff83de0457590b92828a55ad 135 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 128 5.1E-9 T 14-10-2018 IPR028973 PhnB-like JV59_31475 9457e82b950ba33889a3585880747b86 265 Gene3D G3DSA:2.60.120.730 141 265 6.9E-35 T 14-10-2018 JV59_31475 9457e82b950ba33889a3585880747b86 265 Gene3D G3DSA:2.60.120.730 2 137 6.1E-47 T 14-10-2018 JV59_30440 6f3e09492f6f30ec989f0dad16abde47 347 SMART SM00267 168 336 2.7E-46 T 14-10-2018 IPR000160 GGDEF domain JV59_30440 6f3e09492f6f30ec989f0dad16abde47 347 SUPERFAMILY SSF55073 184 337 4.16E-41 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_30440 6f3e09492f6f30ec989f0dad16abde47 347 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 332 1.2E-37 T 14-10-2018 IPR000160 GGDEF domain JV59_30440 6f3e09492f6f30ec989f0dad16abde47 347 Gene3D G3DSA:3.30.70.270 178 346 6.2E-49 T 14-10-2018 JV59_30440 6f3e09492f6f30ec989f0dad16abde47 347 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 335 2.6E-43 T 14-10-2018 IPR000160 GGDEF domain JV59_28345 9c221c8e6a2927767fe9879aeaa2b1fd 82 Gene3D G3DSA:1.10.1900.30 8 76 1.2E-35 T 14-10-2018 IPR038191 YciN superfamily JV59_28345 9c221c8e6a2927767fe9879aeaa2b1fd 82 Pfam PF10692 Protein of unknown function (DUF2498) 3 80 3.8E-41 T 14-10-2018 IPR019633 Protein of unknown function DUF2498 JV59_31220 598290b3ab53d7d4361af4f2cf80c989 479 Pfam PF04888 Secretion system effector C (SseC) like family 88 476 1.1E-61 T 14-10-2018 IPR006972 Secretion system effector C, SseC-like GO:0009405 JV59_22100 f0b39b093c4bd9324f19f84bfbe8f7f6 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 1.6E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_22100 f0b39b093c4bd9324f19f84bfbe8f7f6 300 Gene3D G3DSA:1.10.10.10 2 88 8.4E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_22100 f0b39b093c4bd9324f19f84bfbe8f7f6 300 SUPERFAMILY SSF53850 88 298 9.05E-37 T 14-10-2018 JV59_22100 f0b39b093c4bd9324f19f84bfbe8f7f6 300 Gene3D G3DSA:3.40.190.290 90 298 5.4E-54 T 14-10-2018 JV59_22100 f0b39b093c4bd9324f19f84bfbe8f7f6 300 Pfam PF03466 LysR substrate binding domain 88 297 1.5E-34 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_22100 f0b39b093c4bd9324f19f84bfbe8f7f6 300 SUPERFAMILY SSF46785 3 111 3.49E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_39100 c8f29a073d36e1ca97d49b53bda09d51 217 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 13 214 5.2E-70 T 14-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 JV59_39100 c8f29a073d36e1ca97d49b53bda09d51 217 Pfam PF03006 Haemolysin-III related 9 207 1.6E-38 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 JV59_21775 3b8b70ea3b5be5668532057f7e28596b 154 Pfam PF14086 Domain of unknown function (DUF4266) 104 154 2.3E-18 T 14-10-2018 IPR025362 Domain of unknown function DUF4266 JV59_34265 2273d31aa5d3810369689ab5141c22f2 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 82 6.4E-24 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 JV59_34265 2273d31aa5d3810369689ab5141c22f2 100 Gene3D G3DSA:1.10.10.10 1 100 1.6E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_34265 2273d31aa5d3810369689ab5141c22f2 100 SUPERFAMILY SSF46767 2 84 5.36E-25 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 JV59_25340 15b311a8a270cba55ba6dd498523da13 475 Pfam PF10117 McrBC 5-methylcytosine restriction system component 108 407 1.1E-22 T 14-10-2018 IPR019292 5-methylcytosine restriction system component JV59_25035 de7ba54c95054dfa20d8ea34f7b657c1 276 Pfam PF00202 Aminotransferase class-III 43 259 6.6E-28 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JV59_25035 de7ba54c95054dfa20d8ea34f7b657c1 276 Gene3D G3DSA:3.90.1150.10 166 251 4.0E-42 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JV59_25035 de7ba54c95054dfa20d8ea34f7b657c1 276 Gene3D G3DSA:3.40.640.10 19 165 4.0E-42 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JV59_25035 de7ba54c95054dfa20d8ea34f7b657c1 276 SUPERFAMILY SSF53383 33 260 8.22E-40 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JV59_17830 b5528eee6a573619a5d67e18bccec36c 192 Gene3D G3DSA:3.40.50.150 1 174 6.7E-24 T 14-10-2018 JV59_17830 b5528eee6a573619a5d67e18bccec36c 192 Pfam PF13489 Methyltransferase domain 31 144 2.8E-12 T 14-10-2018 JV59_17830 b5528eee6a573619a5d67e18bccec36c 192 SUPERFAMILY SSF53335 5 192 3.84E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_28985 783073e59a8f7930dd4853ed96e29b5e 261 SUPERFAMILY SSF52540 3 251 2.89E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_28985 783073e59a8f7930dd4853ed96e29b5e 261 Gene3D G3DSA:3.40.50.300 1 259 8.7E-67 T 14-10-2018 JV59_28985 783073e59a8f7930dd4853ed96e29b5e 261 Pfam PF00005 ABC transporter 30 178 1.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JV59_28985 783073e59a8f7930dd4853ed96e29b5e 261 SMART SM00382 38 227 3.9E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain JV59_28985 783073e59a8f7930dd4853ed96e29b5e 261 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JV59_38135 ac601c7c71c3782002c6d490fadb4e30 87 Pfam PF13937 Domain of unknown function (DUF4212) 9 86 1.8E-34 T 14-10-2018 IPR019886 Sodium symporter small subunit, predicted JV59_38135 ac601c7c71c3782002c6d490fadb4e30 87 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 3.7E-36 T 14-10-2018 IPR019886 Sodium symporter small subunit, predicted JV59_21070 71ef1dcc6dafba3099ef922e28ba0a23 292 SUPERFAMILY SSF103481 50 148 1.18E-10 T 14-10-2018 JV59_21070 71ef1dcc6dafba3099ef922e28ba0a23 292 Pfam PF00892 EamA-like transporter family 157 282 1.2E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_21070 71ef1dcc6dafba3099ef922e28ba0a23 292 Pfam PF00892 EamA-like transporter family 13 144 8.8E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_21070 71ef1dcc6dafba3099ef922e28ba0a23 292 SUPERFAMILY SSF103481 189 287 1.96E-12 T 14-10-2018 JV59_23925 550532a51981bc70e2f9ce093eacac7b 101 Pfam PF07045 Domain of unknown function (DUF1330) 5 95 1.1E-19 T 14-10-2018 IPR010753 Domain of unknown function DUF1330 JV59_23925 550532a51981bc70e2f9ce093eacac7b 101 Gene3D G3DSA:3.30.70.100 1 95 1.0E-20 T 14-10-2018 JV59_23925 550532a51981bc70e2f9ce093eacac7b 101 SUPERFAMILY SSF54909 1 95 2.5E-22 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_17555 b5bade8e436152e877849ee87f8188e1 252 Pfam PF13230 Glutamine amidotransferases class-II 25 199 3.0E-20 T 14-10-2018 IPR026869 Putative glutamine amidotransferase type 2 JV59_17555 b5bade8e436152e877849ee87f8188e1 252 SUPERFAMILY SSF56235 2 250 4.55E-31 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JV59_17555 b5bade8e436152e877849ee87f8188e1 252 Gene3D G3DSA:3.60.20.10 1 251 1.5E-88 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JV59_32255 4b54a297ab6616b6720cc51db041e1b4 207 Pfam PF09684 Phage tail protein (Tail_P2_I) 13 145 2.3E-21 T 14-10-2018 IPR006521 Tail protein I JV59_29655 3f3028c440e6f503fd4f0d09fb19347e 295 SUPERFAMILY SSF51197 11 253 4.58E-31 T 14-10-2018 JV59_29655 3f3028c440e6f503fd4f0d09fb19347e 295 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 18 215 2.9E-7 T 14-10-2018 IPR008775 Phytanoyl-CoA dioxygenase JV59_29655 3f3028c440e6f503fd4f0d09fb19347e 295 Gene3D G3DSA:2.60.120.620 2 260 4.0E-16 T 14-10-2018 JV59_24815 210c1245f79b35aa124f6d22e1ece899 369 Pfam PF01497 Periplasmic binding protein 62 312 5.9E-34 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain JV59_24815 210c1245f79b35aa124f6d22e1ece899 369 Gene3D G3DSA:3.40.50.1980 27 368 1.3E-87 T 14-10-2018 JV59_24815 210c1245f79b35aa124f6d22e1ece899 369 SUPERFAMILY SSF53807 27 338 6.28E-45 T 14-10-2018 JV59_24870 8a2686f40afa5d3cd2d00e953fe21860 117 Gene3D G3DSA:2.30.30.110 1 116 1.9E-33 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor JV59_24870 8a2686f40afa5d3cd2d00e953fe21860 117 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 7 106 7.4E-19 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 JV59_24870 8a2686f40afa5d3cd2d00e953fe21860 117 SUPERFAMILY SSF50118 1 109 1.07E-29 T 14-10-2018 JV59_34475 f839401310b29e66eb664aec9b17c4b6 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 10 335 1.3E-98 T 14-10-2018 IPR003770 Endolytic murein transglycosylase JV59_34475 f839401310b29e66eb664aec9b17c4b6 338 Gene3D G3DSA:3.30.160.60 73 110 1.6E-8 T 14-10-2018 JV59_34475 f839401310b29e66eb664aec9b17c4b6 338 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 333 33.079 T 14-10-2018 IPR003770 Endolytic murein transglycosylase JV59_34475 f839401310b29e66eb664aec9b17c4b6 338 Gene3D G3DSA:3.30.160.60 302 338 2.8E-18 T 14-10-2018 JV59_34475 f839401310b29e66eb664aec9b17c4b6 338 Pfam PF02618 YceG-like family 44 328 5.8E-82 T 14-10-2018 IPR003770 Endolytic murein transglycosylase JV59_28450 5cbf6dff92de24077f1f553d7ce595a3 248 Pfam PF05618 Putative ATP-dependant zinc protease 107 243 3.7E-47 T 14-10-2018 JV59_28450 5cbf6dff92de24077f1f553d7ce595a3 248 SUPERFAMILY SSF50630 107 241 3.24E-40 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily JV59_28450 5cbf6dff92de24077f1f553d7ce595a3 248 Gene3D G3DSA:2.40.70.10 104 234 7.7E-41 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily JV59_30655 cc2538975afe75cace4e92c16bf9b14b 212 Pfam PF02397 Bacterial sugar transferase 14 207 1.3E-62 T 14-10-2018 IPR003362 Bacterial sugar transferase JV59_29245 acb9f78ef1b3f591b07d75c4bddb0fdf 344 Pfam PF07995 Glucose / Sorbosone dehydrogenase 16 338 8.2E-107 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase JV59_29245 acb9f78ef1b3f591b07d75c4bddb0fdf 344 Gene3D G3DSA:2.120.10.30 2 342 3.7E-94 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like JV59_29245 acb9f78ef1b3f591b07d75c4bddb0fdf 344 SUPERFAMILY SSF50952 5 337 9.15E-39 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 JV59_38930 934cf02e1ca849117b591d58f068bf4b 652 Pfam PF05170 AsmA family 2 544 4.1E-93 T 14-10-2018 IPR007844 AsmA JV59_31320 829914e14788acebad5fae5fa4f6359b 143 Gene3D G3DSA:3.30.1460.10 2 126 1.7E-26 T 14-10-2018 JV59_31320 829914e14788acebad5fae5fa4f6359b 143 Pfam PF05932 Tir chaperone protein (CesT) family 6 117 2.6E-12 T 14-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 JV59_31320 829914e14788acebad5fae5fa4f6359b 143 SUPERFAMILY SSF69635 3 125 9.81E-22 T 14-10-2018 JV59_37180 9ca68225e5542597635cf86e78a1ccd0 198 SUPERFAMILY SSF53955 6 162 2.11E-23 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily JV59_37180 9ca68225e5542597635cf86e78a1ccd0 198 Gene3D G3DSA:1.10.530.10 32 194 1.8E-14 T 14-10-2018 JV59_34090 6f8a6dd88fb86a50a33a41c5f88ee30e 423 Gene3D G3DSA:1.20.1600.10 26 423 1.0E-77 T 14-10-2018 JV59_34090 6f8a6dd88fb86a50a33a41c5f88ee30e 423 SUPERFAMILY SSF56954 4 412 1.22E-76 T 14-10-2018 JV59_34090 6f8a6dd88fb86a50a33a41c5f88ee30e 423 Pfam PF02321 Outer membrane efflux protein 28 204 1.7E-27 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 JV59_34090 6f8a6dd88fb86a50a33a41c5f88ee30e 423 Pfam PF02321 Outer membrane efflux protein 229 407 1.8E-26 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 JV59_19925 e58d58da393ba5fc63f0d6f2ec938002 362 Gene3D G3DSA:1.10.3720.10 121 352 8.3E-20 T 14-10-2018 IPR035906 MetI-like superfamily JV59_19925 e58d58da393ba5fc63f0d6f2ec938002 362 SUPERFAMILY SSF161098 126 344 9.03E-17 T 14-10-2018 IPR035906 MetI-like superfamily JV59_19925 e58d58da393ba5fc63f0d6f2ec938002 362 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 150 357 9.3E-36 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_30860 28ad6c73bb429248da35f98209e3061f 238 Pfam PF03640 Secreted repeat of unknown function 22 64 8.4E-8 T 14-10-2018 IPR005297 Lipoprotein repeat JV59_30860 28ad6c73bb429248da35f98209e3061f 238 Pfam PF03640 Secreted repeat of unknown function 141 173 4.2E-8 T 14-10-2018 IPR005297 Lipoprotein repeat JV59_30860 28ad6c73bb429248da35f98209e3061f 238 Pfam PF03640 Secreted repeat of unknown function 196 236 7.8E-14 T 14-10-2018 IPR005297 Lipoprotein repeat JV59_30860 28ad6c73bb429248da35f98209e3061f 238 Pfam PF03640 Secreted repeat of unknown function 83 123 1.1E-16 T 14-10-2018 IPR005297 Lipoprotein repeat JV59_34715 575a4882ec029567edd7b5bd30036384 619 Gene3D G3DSA:3.10.50.40 261 387 3.7E-33 T 14-10-2018 JV59_34715 575a4882ec029567edd7b5bd30036384 619 Pfam PF13616 PPIC-type PPIASE domain 262 361 1.4E-24 T 14-10-2018 JV59_34715 575a4882ec029567edd7b5bd30036384 619 SUPERFAMILY SSF109998 39 240 1.57E-36 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily JV59_34715 575a4882ec029567edd7b5bd30036384 619 Pfam PF13624 SurA N-terminal domain 1 166 1.9E-51 T 14-10-2018 JV59_34715 575a4882ec029567edd7b5bd30036384 619 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 299 320 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 JV59_34715 575a4882ec029567edd7b5bd30036384 619 SUPERFAMILY SSF54534 225 361 6.54E-30 T 14-10-2018 JV59_01265 5bcb74244e8199eadcd8a8b1677e49e0 559 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 96 441 7.9E-19 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JV59_01265 5bcb74244e8199eadcd8a8b1677e49e0 559 SUPERFAMILY SSF52540 73 462 2.38E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_22660 4182ba82aad62c8de0abf565e6316ad3 382 Pfam PF06224 Winged helix DNA-binding domain 37 369 1.7E-78 T 14-10-2018 IPR009351 Protein of unknown function DUF1006 JV59_25635 36b42408d15dfac3843be6f2cb9b1d8c 245 Gene3D G3DSA:3.40.50.12500 4 244 7.1E-58 T 14-10-2018 JV59_16700 f35c35b85cf25d1413b939bbfe38c325 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 15 68 1.0E-11 T 14-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor JV59_16700 f35c35b85cf25d1413b939bbfe38c325 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 4 68 1.0E-30 T 14-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor JV59_27555 172e580f7eff0f605ef55f20dd28cf84 358 Pfam PF01594 AI-2E family transporter 20 345 1.5E-72 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like JV59_29595 be162361fe8392e9a814dd1f378207ee 297 Gene3D G3DSA:3.20.20.150 1 290 2.8E-75 T 14-10-2018 JV59_29595 be162361fe8392e9a814dd1f378207ee 297 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 3 290 8.3E-127 T 14-10-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 JV59_29595 be162361fe8392e9a814dd1f378207ee 297 SUPERFAMILY SSF51658 6 290 2.75E-57 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily JV59_29595 be162361fe8392e9a814dd1f378207ee 297 Pfam PF01261 Xylose isomerase-like TIM barrel 32 245 4.7E-25 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain JV59_36630 596922a7e96332cf3f7e95f3b846c5c2 116 Pfam PF10973 Protein of unknown function (DUF2799) 28 108 4.2E-21 T 14-10-2018 IPR021242 Protein of unknown function DUF2799 JV59_33065 6750ff5e74edb100c11954c910cc65fe 384 Pfam PF03222 Tryptophan/tyrosine permease family 2 380 9.4E-73 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 JV59_33065 6750ff5e74edb100c11954c910cc65fe 384 PRINTS PR00166 Aromatic amino acid permease signature 147 167 2.6E-30 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_33065 6750ff5e74edb100c11954c910cc65fe 384 PRINTS PR00166 Aromatic amino acid permease signature 327 346 2.6E-30 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_33065 6750ff5e74edb100c11954c910cc65fe 384 PRINTS PR00166 Aromatic amino acid permease signature 82 102 2.6E-30 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_33065 6750ff5e74edb100c11954c910cc65fe 384 PRINTS PR00166 Aromatic amino acid permease signature 37 56 2.6E-30 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_33065 6750ff5e74edb100c11954c910cc65fe 384 PRINTS PR00166 Aromatic amino acid permease signature 306 324 2.6E-30 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_33065 6750ff5e74edb100c11954c910cc65fe 384 PRINTS PR00166 Aromatic amino acid permease signature 182 204 2.6E-30 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_33065 6750ff5e74edb100c11954c910cc65fe 384 PRINTS PR00166 Aromatic amino acid permease signature 10 33 2.6E-30 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 JV59_19960 060ebf8ad44a2d57fe2ca0b1b3fa04ba 164 SUPERFAMILY SSF48452 4 128 2.61E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_27760 fed6dd69c90bc27e1ad7beea89c34748 445 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 2 100 7.1E-17 T 14-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 JV59_27760 fed6dd69c90bc27e1ad7beea89c34748 445 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 215 439 2.3E-46 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 JV59_29260 7b16fe5783c4dae499f0126b5ce7810a 266 Pfam PF17131 Outer membrane lipoprotein-sorting protein 81 264 7.8E-65 T 14-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein JV59_29260 7b16fe5783c4dae499f0126b5ce7810a 266 Gene3D G3DSA:2.50.20.10 28 264 5.9E-96 T 14-10-2018 JV59_29260 7b16fe5783c4dae499f0126b5ce7810a 266 SUPERFAMILY SSF89392 106 215 3.18E-6 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX JV59_32610 c45c5ee0155c268c1cc0ee2fe479cc56 151 SUPERFAMILY SSF55729 1 150 1.83E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_32610 c45c5ee0155c268c1cc0ee2fe479cc56 151 Pfam PF00583 Acetyltransferase (GNAT) family 25 116 3.4E-12 T 14-10-2018 IPR000182 GNAT domain JV59_32610 c45c5ee0155c268c1cc0ee2fe479cc56 151 Gene3D G3DSA:3.40.630.30 4 151 4.4E-40 T 14-10-2018 JV59_32665 c89bb80af52937dcd8eeefa34aa7893e 158 SUPERFAMILY SSF55729 1 152 1.32E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_32665 c89bb80af52937dcd8eeefa34aa7893e 158 Gene3D G3DSA:3.40.630.30 1 156 1.4E-33 T 14-10-2018 JV59_32665 c89bb80af52937dcd8eeefa34aa7893e 158 Pfam PF00583 Acetyltransferase (GNAT) family 58 145 2.7E-15 T 14-10-2018 IPR000182 GNAT domain JV59_27200 db0a9b6ea94a11b6bc86f72af7e3710f 264 Pfam PF07556 Protein of unknown function (DUF1538) 21 246 1.7E-69 T 14-10-2018 IPR011435 Protein of unknown function DUF1538 JV59_23085 47ecb4065375a94ac530212324b94214 78 Pfam PF11391 Protein of unknown function (DUF2798) 11 69 6.5E-19 T 14-10-2018 IPR021529 Protein of unknown function DUF2798 JV59_25185 36d901507757788cc56451e128356ff1 84 TIGRFAM TIGR02758 TraA_TIGR: type IV conjugative transfer system pilin TraA 11 83 3.1E-23 T 14-10-2018 IPR008873 TraA GO:0000746|GO:0005576 JV59_21325 b818a71316be4ea3a7ed8d9ad205abaf 135 SUPERFAMILY SSF51316 5 134 1.78E-30 T 14-10-2018 IPR011057 Mss4-like superfamily JV59_21325 b818a71316be4ea3a7ed8d9ad205abaf 135 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 30 118 2.3E-20 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 JV59_21325 b818a71316be4ea3a7ed8d9ad205abaf 135 Gene3D G3DSA:3.90.1590.10 2 120 8.1E-10 T 14-10-2018 JV59_20120 47bfae74e1fdefb30e26b95efc8cd7cb 199 Gene3D G3DSA:3.80.10.10 14 195 3.5E-7 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily JV59_22445 9ed2ed4efc501525685afdd1b38c07fc 307 Gene3D G3DSA:1.10.10.10 2 83 1.3E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_22445 9ed2ed4efc501525685afdd1b38c07fc 307 Gene3D G3DSA:3.40.190.10 87 287 2.8E-49 T 14-10-2018 JV59_22445 9ed2ed4efc501525685afdd1b38c07fc 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 6.1E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JV59_22445 9ed2ed4efc501525685afdd1b38c07fc 307 Gene3D G3DSA:3.40.190.10 165 263 2.8E-49 T 14-10-2018 JV59_22445 9ed2ed4efc501525685afdd1b38c07fc 307 SUPERFAMILY SSF46785 3 80 9.52E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_22445 9ed2ed4efc501525685afdd1b38c07fc 307 Pfam PF03466 LysR substrate binding domain 92 287 1.7E-17 T 14-10-2018 IPR005119 LysR, substrate-binding JV59_22445 9ed2ed4efc501525685afdd1b38c07fc 307 SUPERFAMILY SSF53850 87 287 4.71E-35 T 14-10-2018 JV59_27700 7b9468e635e0bdf9cfdfb3f7f458ed1e 181 Pfam PF10135 Rod binding protein 54 104 4.2E-12 T 14-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal JV59_36315 84dfa0e61717932d9783aa35e50dffc3 381 TIGRFAM TIGR00937 2A51: chromate efflux transporter 8 370 2.6E-94 T 14-10-2018 IPR014047 Chromate transporter, long chain JV59_36315 84dfa0e61717932d9783aa35e50dffc3 381 Pfam PF02417 Chromate transporter 3 168 2.2E-35 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 JV59_36315 84dfa0e61717932d9783aa35e50dffc3 381 Pfam PF02417 Chromate transporter 212 374 1.3E-34 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 JV59_36315 84dfa0e61717932d9783aa35e50dffc3 381 PIRSF PIRSF004810 1 381 9.9E-119 T 14-10-2018 IPR014047 Chromate transporter, long chain JV59_38010 00d53abb74aefc009cf9035695d78f7c 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 8.3E-133 T 14-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 JV59_38010 00d53abb74aefc009cf9035695d78f7c 339 SUPERFAMILY SSF55729 1 337 6.3E-132 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_38010 00d53abb74aefc009cf9035695d78f7c 339 Gene3D G3DSA:3.40.630.30 1 274 5.7E-115 T 14-10-2018 JV59_38010 00d53abb74aefc009cf9035695d78f7c 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 3.6E-141 T 14-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 JV59_38010 00d53abb74aefc009cf9035695d78f7c 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 5.3E-134 T 14-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 JV59_38010 00d53abb74aefc009cf9035695d78f7c 339 Gene3D G3DSA:2.40.40.20 276 339 2.6E-6 T 14-10-2018 JV59_39775 5ab10cfba6a2e4822969acd377fce837 404 SUPERFAMILY SSF89550 13 233 1.26E-7 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 JV59_17415 cfbf70bd6cc30dd6c8e3794b88cfbfa6 177 Pfam PF01923 Cobalamin adenosyltransferase 20 156 4.8E-14 T 14-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 JV59_17415 cfbf70bd6cc30dd6c8e3794b88cfbfa6 177 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 29 149 5.0E-51 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 JV59_17415 cfbf70bd6cc30dd6c8e3794b88cfbfa6 177 Gene3D G3DSA:1.20.1200.10 17 172 3.5E-21 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 JV59_17415 cfbf70bd6cc30dd6c8e3794b88cfbfa6 177 SUPERFAMILY SSF89028 9 169 2.94E-34 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 JV59_22355 04da33cc65b90594125607fd45cd030f 158 SUPERFAMILY SSF54427 31 147 7.07E-22 T 14-10-2018 IPR032710 NTF2-like domain superfamily JV59_22355 04da33cc65b90594125607fd45cd030f 158 Pfam PF12680 SnoaL-like domain 36 137 1.8E-12 T 14-10-2018 IPR037401 SnoaL-like domain JV59_22355 04da33cc65b90594125607fd45cd030f 158 Gene3D G3DSA:3.10.450.50 28 153 2.0E-25 T 14-10-2018 JV59_26895 78b7168d786da43358f0ab4064f8e481 280 Pfam PF01148 Cytidylyltransferase family 2 280 4.3E-70 T 14-10-2018 JV59_26895 78b7168d786da43358f0ab4064f8e481 280 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 238 264 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 JV59_31120 8f234ff75093b6f4ec08f195be66cfed 58 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 8 45 2.3E-13 T 14-10-2018 IPR008621 Cbb3-type cytochrome oxidase component JV59_26565 29aad8bc001244e0ec0110b14d59044b 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 1.7E-27 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26565 29aad8bc001244e0ec0110b14d59044b 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 14-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JV59_26565 29aad8bc001244e0ec0110b14d59044b 82 Pfam PF00886 Ribosomal protein S16 8 68 1.3E-23 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26565 29aad8bc001244e0ec0110b14d59044b 82 SUPERFAMILY SSF54565 1 76 5.89E-28 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26565 29aad8bc001244e0ec0110b14d59044b 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.16 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_26565 29aad8bc001244e0ec0110b14d59044b 82 Gene3D G3DSA:3.30.1320.10 1 82 2.1E-31 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JV59_18220 008d02f4c5e8241046da15b9c9a5b3d3 274 Gene3D G3DSA:1.10.510.10 9 272 4.3E-27 T 14-10-2018 JV59_18220 008d02f4c5e8241046da15b9c9a5b3d3 274 Pfam PF00069 Protein kinase domain 39 216 3.5E-21 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JV59_18220 008d02f4c5e8241046da15b9c9a5b3d3 274 SMART SM00220 8 268 2.0E-8 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JV59_18220 008d02f4c5e8241046da15b9c9a5b3d3 274 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 132 144 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 JV59_18220 008d02f4c5e8241046da15b9c9a5b3d3 274 SUPERFAMILY SSF56112 28 253 3.24E-32 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily JV59_34165 04fc279bc9789f61e4402e11c89b6edb 446 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 441 4.1E-112 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 JV59_34165 04fc279bc9789f61e4402e11c89b6edb 446 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 10 436 1.2E-101 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit JV59_34165 04fc279bc9789f61e4402e11c89b6edb 446 PIRSF PIRSF006066 4 446 4.8E-122 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 JV59_34190 534177d2555e197df313d35fb8baf294 262 Pfam PF08867 FRG domain 32 110 1.5E-6 T 14-10-2018 IPR014966 FRG domain JV59_02625 85d29bc0239e8ebe3a2bce51f9cfc7b4 528 Pfam PF03806 AbgT putative transporter family 19 526 3.3E-224 T 14-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 JV59_27335 6051b4bdf475bd25702e5669c5fe669b 141 SUPERFAMILY SSF140566 1 113 8.11E-23 T 14-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 JV59_27335 6051b4bdf475bd25702e5669c5fe669b 141 Pfam PF05130 FlgN protein 2 130 8.5E-24 T 14-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 JV59_27335 6051b4bdf475bd25702e5669c5fe669b 141 Gene3D G3DSA:1.20.58.300 1 113 1.5E-7 T 14-10-2018 JV59_34230 6b379f7c637647bc6b7feb54d1b8c3f0 503 Pfam PF13665 Domain of unknown function (DUF4150) 22 127 6.9E-34 T 14-10-2018 IPR025425 Domain of unknown function DUF4150 JV59_35290 ab8321e65821bbf34722584d0ed4e12e 152 Pfam PF11143 Protein of unknown function (DUF2919) 3 147 1.2E-54 T 14-10-2018 IPR021318 Protein of unknown function DUF2919 JV59_36855 3ec28d36682f8051b3c01eab780f6633 419 Pfam PF01384 Phosphate transporter family 26 407 1.8E-112 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 JV59_00160 99ec1c75a54255ddfbb222b2faee1b3f 163 Gene3D G3DSA:3.30.700.10 7 162 1.3E-13 T 14-10-2018 JV59_00160 99ec1c75a54255ddfbb222b2faee1b3f 163 SUPERFAMILY SSF54523 7 149 1.88E-15 T 14-10-2018 JV59_00160 99ec1c75a54255ddfbb222b2faee1b3f 163 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 5.0E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_00160 99ec1c75a54255ddfbb222b2faee1b3f 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 2.8E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_00160 99ec1c75a54255ddfbb222b2faee1b3f 163 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site JV59_27565 b7825157060c16d5e81efd1d4f914f68 156 Gene3D G3DSA:3.40.30.10 3 155 2.2E-44 T 14-10-2018 JV59_27565 b7825157060c16d5e81efd1d4f914f68 156 SUPERFAMILY SSF52833 4 154 1.43E-45 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_27565 b7825157060c16d5e81efd1d4f914f68 156 Pfam PF00578 AhpC/TSA family 7 134 1.1E-33 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JV59_28140 2062c1de69a8b34715b2d14a7903295e 200 Pfam PF13649 Methyltransferase domain 54 140 8.5E-9 T 14-10-2018 JV59_28140 2062c1de69a8b34715b2d14a7903295e 200 Gene3D G3DSA:3.40.50.150 17 195 8.9E-15 T 14-10-2018 JV59_28140 2062c1de69a8b34715b2d14a7903295e 200 SUPERFAMILY SSF53335 23 153 4.03E-15 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_20260 aae3a9c2e5ae48c7c4529c91e0943b4f 147 TIGRFAM TIGR03646 YtoQ_fam: YtoQ family protein 3 144 3.3E-62 T 14-10-2018 IPR019884 YtoQ family protein JV59_20260 aae3a9c2e5ae48c7c4529c91e0943b4f 147 Pfam PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ 6 143 4.3E-63 T 14-10-2018 IPR019884 YtoQ family protein JV59_17465 abbd051c96e5f5b843100e06ba7f49b9 361 SUPERFAMILY SSF56935 32 361 6.41E-26 T 14-10-2018 JV59_17465 abbd051c96e5f5b843100e06ba7f49b9 361 Gene3D G3DSA:2.40.160.10 115 361 1.7E-8 T 14-10-2018 IPR023614 Porin domain superfamily JV59_19355 4c65061eef42b53e7ce9583879091d0f 199 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 22 32 - T 14-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 JV59_19355 4c65061eef42b53e7ce9583879091d0f 199 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 25 182 7.2E-22 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain JV59_19355 4c65061eef42b53e7ce9583879091d0f 199 Gene3D G3DSA:3.40.50.1110 19 199 1.3E-62 T 14-10-2018 IPR036514 SGNH hydrolase superfamily JV59_19355 4c65061eef42b53e7ce9583879091d0f 199 SUPERFAMILY SSF52266 21 198 1.69E-49 T 14-10-2018 JV59_19930 9065223f7aee11460edf8e862cb11932 605 Gene3D G3DSA:3.40.190.10 33 591 4.4E-225 T 14-10-2018 JV59_19930 9065223f7aee11460edf8e862cb11932 605 PIRSF PIRSF002741 13 596 8.2E-124 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 JV59_19930 9065223f7aee11460edf8e862cb11932 605 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 100 508 1.9E-77 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain JV59_19930 9065223f7aee11460edf8e862cb11932 605 SUPERFAMILY SSF53850 51 593 5.2E-115 T 14-10-2018 JV59_19930 9065223f7aee11460edf8e862cb11932 605 Gene3D G3DSA:3.10.105.10 313 571 4.4E-225 T 14-10-2018 JV59_23670 e85d3f9b97a8c51f8499c4310dd29640 597 Pfam PF08811 Protein of unknown function (DUF1800) 54 594 3.0E-81 T 14-10-2018 IPR014917 Protein of unknown function DUF1800 JV59_39200 7180a42a0da276d4a0dd7b0cbac4c284 184 Pfam PF01169 Uncharacterized protein family UPF0016 103 178 1.7E-19 T 14-10-2018 IPR001727 Gdt1 family JV59_39200 7180a42a0da276d4a0dd7b0cbac4c284 184 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 2.5E-20 T 14-10-2018 IPR001727 Gdt1 family JV59_34955 ee45f701bd72f895ee067c84c01e92fa 258 Pfam PF13614 AAA domain 3 181 2.4E-51 T 14-10-2018 IPR025669 AAA domain JV59_34955 ee45f701bd72f895ee067c84c01e92fa 258 Gene3D G3DSA:3.40.50.300 1 254 3.7E-67 T 14-10-2018 JV59_34955 ee45f701bd72f895ee067c84c01e92fa 258 PIRSF PIRSF009320 96 240 5.5E-7 T 14-10-2018 JV59_34955 ee45f701bd72f895ee067c84c01e92fa 258 PIRSF PIRSF009320 1 64 2.8E-13 T 14-10-2018 JV59_34955 ee45f701bd72f895ee067c84c01e92fa 258 SUPERFAMILY SSF52540 1 252 1.68E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_23940 e054d38333d29e77bc46b70b62754dbb 154 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 20 146 4.9E-26 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ JV59_37650 3afbc6afacd6cb0d7c56ff1562d2b9ac 267 Gene3D G3DSA:2.60.120.730 1 136 7.6E-10 T 14-10-2018 JV59_28595 44557101b5a6130a6cb6bd6564aeee72 528 PIRSF PIRSF006446 1 332 6.0E-116 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 JV59_28595 44557101b5a6130a6cb6bd6564aeee72 528 PIRSF PIRSF006446 337 526 6.0E-33 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 JV59_28595 44557101b5a6130a6cb6bd6564aeee72 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 8.2E-177 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 JV59_28605 3cd22e08fd674eb53e4dbf06352a574e 35 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 1.1E-20 T 14-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 JV59_28605 3cd22e08fd674eb53e4dbf06352a574e 35 Pfam PF08173 Membrane bound YbgT-like protein 1 27 1.3E-17 T 14-10-2018 IPR012994 Membrane bound YbgT-like JV59_36025 ac043473ee6a63ac25b680b055c1b835 101 Gene3D G3DSA:1.10.10.710 21 99 2.8E-7 T 14-10-2018 IPR038627 YebG-like superfamily JV59_36025 ac043473ee6a63ac25b680b055c1b835 101 Pfam PF07130 YebG protein 1 72 1.7E-31 T 14-10-2018 IPR009813 Uncharacterised protein family YebG JV59_18580 6093a3d0d8851386b31ecd86ebe145eb 457 Gene3D G3DSA:3.40.190.10 122 440 6.2E-141 T 14-10-2018 JV59_18580 6093a3d0d8851386b31ecd86ebe145eb 457 Gene3D G3DSA:3.40.190.10 37 435 6.2E-141 T 14-10-2018 JV59_18580 6093a3d0d8851386b31ecd86ebe145eb 457 Pfam PF13379 NMT1-like family 31 311 3.4E-107 T 14-10-2018 JV59_18580 6093a3d0d8851386b31ecd86ebe145eb 457 SUPERFAMILY SSF53850 37 338 4.89E-23 T 14-10-2018 JV59_38070 ab4fc01cd3906c39bc09769e58d78571 865 SUPERFAMILY SSF74853 20 120 2.35E-5 T 14-10-2018 IPR036415 Lamin tail domain superfamily JV59_38070 ab4fc01cd3906c39bc09769e58d78571 865 Pfam PF00932 Lamin Tail Domain 21 129 4.1E-14 T 14-10-2018 IPR001322 Lamin tail domain JV59_38070 ab4fc01cd3906c39bc09769e58d78571 865 SUPERFAMILY SSF56219 470 842 2.3E-28 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JV59_29715 0290b23ea669553af1965cbc1b0cda95 318 Pfam PF03547 Membrane transport protein 164 305 3.9E-12 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 JV59_22535 3163599582891526ba6638d3020d882a 197 SUPERFAMILY SSF47413 6 67 6.19E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_22535 3163599582891526ba6638d3020d882a 197 Gene3D G3DSA:1.10.260.40 1 76 8.3E-9 T 14-10-2018 JV59_22535 3163599582891526ba6638d3020d882a 197 SMART SM00530 7 61 0.0019 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_38510 b8cc0e3add4556299b6faa1241d987ec 220 Gene3D G3DSA:3.50.30.50 1 220 2.6E-57 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 JV59_38510 b8cc0e3add4556299b6faa1241d987ec 220 Pfam PF04199 Putative cyclase 5 155 8.1E-25 T 14-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 JV59_38510 b8cc0e3add4556299b6faa1241d987ec 220 SUPERFAMILY SSF102198 1 218 3.14E-49 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 JV59_30125 11d9c1595f8b6f2943e5370cae86f8f9 424 Pfam PF09335 SNARE associated Golgi protein 23 146 4.9E-14 T 14-10-2018 IPR032816 SNARE associated Golgi protein JV59_30125 11d9c1595f8b6f2943e5370cae86f8f9 424 Pfam PF14067 LssY C-terminus 243 410 3.3E-34 T 14-10-2018 IPR025902 LssY-like C-terminal domain JV59_26075 c49b187c20ec2d4c049214ce8225de11 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 9.5E-25 T 14-10-2018 IPR019201 Protein of unknown function DUF2065 JV59_35065 f794d6f6bc3ef11d10a8e88414f687af 184 Gene3D G3DSA:3.30.70.1070 102 176 1.3E-8 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 JV59_35065 f794d6f6bc3ef11d10a8e88414f687af 184 Pfam PF05036 Sporulation related domain 108 168 9.4E-11 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 JV59_35065 f794d6f6bc3ef11d10a8e88414f687af 184 SUPERFAMILY SSF110997 107 180 6.8E-14 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 JV59_29110 9afd97e0732cd83898daec071f6558c1 82 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 5.0E-18 T 14-10-2018 IPR010710 Protein of unknown function DUF1289 JV59_32945 71cb6f92d5ca4e5544b9fd3d73c650df 517 Pfam PF01471 Putative peptidoglycan binding domain 231 263 1.3E-7 T 14-10-2018 IPR002477 Peptidoglycan binding-like JV59_32945 71cb6f92d5ca4e5544b9fd3d73c650df 517 Pfam PF03734 L,D-transpeptidase catalytic domain 290 458 2.6E-29 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 JV59_32945 71cb6f92d5ca4e5544b9fd3d73c650df 517 SUPERFAMILY SSF141523 288 450 4.97E-20 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like JV59_32945 71cb6f92d5ca4e5544b9fd3d73c650df 517 SUPERFAMILY SSF53955 236 309 4.78E-10 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily JV59_18655 e5564eb00b5d03c5ac711698f6711ad4 324 Pfam PF03595 Voltage-dependent anion channel 12 305 3.0E-26 T 14-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 JV59_18655 e5564eb00b5d03c5ac711698f6711ad4 324 Gene3D G3DSA:1.50.10.150 5 315 1.8E-31 T 14-10-2018 IPR038665 Voltage-dependent anion channel superfamily JV59_24560 c84694855479f57f568816e57398a320 110 SUPERFAMILY SSF103481 10 107 4.71E-8 T 14-10-2018 JV59_24560 c84694855479f57f568816e57398a320 110 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 4 109 7.3E-40 T 14-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 JV59_24560 c84694855479f57f568816e57398a320 110 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 4 108 24.849 T 14-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 JV59_25385 f7a945dd087397addc4f5d443fde0576 80 SUPERFAMILY SSF143120 12 67 2.88E-8 T 14-10-2018 IPR036165 YefM-like superfamily JV59_25385 f7a945dd087397addc4f5d443fde0576 80 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 11 77 6.1E-9 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM JV59_25385 f7a945dd087397addc4f5d443fde0576 80 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 12 61 2.8E-5 T 14-10-2018 JV59_31155 3352773cbbd2df59d21146b5d8900297 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 1.1E-24 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 JV59_31155 3352773cbbd2df59d21146b5d8900297 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 79 98 1.1E-24 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 JV59_31155 3352773cbbd2df59d21146b5d8900297 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 1.1E-24 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 JV59_31155 3352773cbbd2df59d21146b5d8900297 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 17 38 1.1E-24 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 JV59_31155 3352773cbbd2df59d21146b5d8900297 260 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 2 254 3.1E-72 T 14-10-2018 IPR006304 Type III secretion protein SpaR/YscT GO:0016021 JV59_31155 3352773cbbd2df59d21146b5d8900297 260 Pfam PF01311 Bacterial export proteins, family 1 10 246 5.6E-52 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 JV59_32525 df375261f9e0a73fd598073e682dfc30 241 Pfam PF12119 Protein of unknown function (DUF3581) 1 217 5.1E-99 T 14-10-2018 IPR021974 Protein of unknown function DUF3581 JV59_32930 f01760e2579df7dab4c31757075470af 225 Pfam PF11201 Protein of unknown function (DUF2982) 67 216 4.3E-60 T 14-10-2018 IPR021367 Protein of unknown function DUF2982 JV59_15985 a840a3f4e2f18b3a63806a4bf0e089f0 333 Gene3D G3DSA:3.10.310.10 144 309 2.4E-112 T 14-10-2018 JV59_15985 a840a3f4e2f18b3a63806a4bf0e089f0 333 SUPERFAMILY SSF54506 3 330 8.75E-117 T 14-10-2018 JV59_15985 a840a3f4e2f18b3a63806a4bf0e089f0 333 PIRSF PIRSF029792 1 333 2.4E-135 T 14-10-2018 IPR008794 Proline racemase family JV59_15985 a840a3f4e2f18b3a63806a4bf0e089f0 333 Gene3D G3DSA:3.10.310.10 7 332 2.4E-112 T 14-10-2018 JV59_15985 a840a3f4e2f18b3a63806a4bf0e089f0 333 Pfam PF05544 Proline racemase 8 330 2.4E-128 T 14-10-2018 IPR008794 Proline racemase family JV59_21970 528419b95bd97904a7e8fc053a4d44a9 594 Gene3D G3DSA:1.10.274.90 2 123 4.4E-20 T 14-10-2018 JV59_21970 528419b95bd97904a7e8fc053a4d44a9 594 Pfam PF04183 IucA / IucC family 139 382 1.5E-67 T 14-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 JV59_21970 528419b95bd97904a7e8fc053a4d44a9 594 Gene3D G3DSA:1.10.510.40 372 578 2.0E-53 T 14-10-2018 JV59_21970 528419b95bd97904a7e8fc053a4d44a9 594 Pfam PF06276 Ferric iron reductase FhuF-like transporter 405 554 4.5E-31 T 14-10-2018 IPR022770 Ferric iron reductase FhuF domain JV59_38750 ee3a45ea9fcb1538ce5aeeb503dbb109 492 Gene3D G3DSA:1.25.40.10 41 201 6.6E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_38750 ee3a45ea9fcb1538ce5aeeb503dbb109 492 Pfam PF04575 Protein of unknown function (DUF560) 200 492 1.9E-41 T 14-10-2018 IPR007655 Protein of unknown function DUF560 JV59_38750 ee3a45ea9fcb1538ce5aeeb503dbb109 492 SUPERFAMILY SSF48452 84 175 1.85E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_27255 0cc4db15d1e831adc3df982d46bbdcb8 146 Pfam PF04214 Protein of unknown function, DUF 48 117 7.0E-32 T 14-10-2018 IPR007332 Protein of unknown function DUF411 JV59_23325 8f395cfe07a4b750f78b37abdbf33867 141 PIRSF PIRSF006276 1 141 7.2E-45 T 14-10-2018 IPR006015 Universal stress protein A JV59_23325 8f395cfe07a4b750f78b37abdbf33867 141 Gene3D G3DSA:3.40.50.620 2 141 9.0E-39 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JV59_23325 8f395cfe07a4b750f78b37abdbf33867 141 Pfam PF00582 Universal stress protein family 3 138 8.9E-17 T 14-10-2018 IPR006016 UspA JV59_23325 8f395cfe07a4b750f78b37abdbf33867 141 SUPERFAMILY SSF52402 3 139 3.18E-28 T 14-10-2018 JV59_35620 74d038e634756432a7ed4ab0b9f34e92 289 Pfam PF01963 TraB family 23 276 9.3E-52 T 14-10-2018 IPR002816 Pheromone shutdown, TraB JV59_01085 fe66ef0e5b4db188b1e4bd307c33260e 209 Pfam PF01810 LysE type translocator 15 201 4.8E-42 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_21825 9bca61c39ac67961bc995bea323f39e3 208 Pfam PF09476 Pilus biogenesis CpaD protein (pilus_cpaD) 8 185 4.3E-29 T 14-10-2018 IPR019027 Pilus biogenesis CpaD-related JV59_17700 a9c9f59ce92600eade4443add767d949 127 Pfam PF10990 Protein of unknown function (DUF2809) 14 96 1.3E-22 T 14-10-2018 IPR021257 Protein of unknown function DUF2809 JV59_37105 1e2ca8989ed08db01fc13956c63948bb 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 44.327 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 JV59_37105 1e2ca8989ed08db01fc13956c63948bb 200 SUPERFAMILY SSF52016 1 195 4.91E-60 T 14-10-2018 JV59_37105 1e2ca8989ed08db01fc13956c63948bb 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 3.6E-99 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 JV59_37105 1e2ca8989ed08db01fc13956c63948bb 200 Gene3D G3DSA:3.20.19.10 1 180 3.7E-78 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 JV59_37105 1e2ca8989ed08db01fc13956c63948bb 200 Pfam PF00694 Aconitase C-terminal domain 1 125 3.1E-39 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 JV59_29545 abd551457e55cb5cfe72336c42f87d1b 548 Pfam PF02470 MlaD protein 43 134 1.8E-8 T 14-10-2018 IPR003399 Mce/MlaD JV59_29545 abd551457e55cb5cfe72336c42f87d1b 548 Pfam PF02470 MlaD protein 288 391 6.3E-11 T 14-10-2018 IPR003399 Mce/MlaD JV59_29545 abd551457e55cb5cfe72336c42f87d1b 548 Pfam PF02470 MlaD protein 160 222 1.2E-5 T 14-10-2018 IPR003399 Mce/MlaD JV59_28880 13f56cfcca155bcaea7f20e2eddc4437 177 Pfam PF12915 Protein of unknown function (DUF3833) 14 174 6.3E-63 T 14-10-2018 IPR024409 Protein of unknown function DUF3833 JV59_16605 d69f146f1f0e9e2b17ac230aed9c0f3b 207 ProSitePatterns PS00195 Glutaredoxin active site. 110 126 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 JV59_16605 d69f146f1f0e9e2b17ac230aed9c0f3b 207 SUPERFAMILY SSF52833 109 189 1.68E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_16605 d69f146f1f0e9e2b17ac230aed9c0f3b 207 PRINTS PR00160 Glutaredoxin signature 108 126 4.3E-7 T 14-10-2018 IPR014025 Glutaredoxin subgroup JV59_16605 d69f146f1f0e9e2b17ac230aed9c0f3b 207 PRINTS PR00160 Glutaredoxin signature 171 184 4.3E-7 T 14-10-2018 IPR014025 Glutaredoxin subgroup JV59_16605 d69f146f1f0e9e2b17ac230aed9c0f3b 207 PRINTS PR00160 Glutaredoxin signature 157 170 4.3E-7 T 14-10-2018 IPR014025 Glutaredoxin subgroup JV59_16605 d69f146f1f0e9e2b17ac230aed9c0f3b 207 Gene3D G3DSA:3.40.30.10 109 185 6.4E-19 T 14-10-2018 JV59_16605 d69f146f1f0e9e2b17ac230aed9c0f3b 207 Pfam PF00462 Glutaredoxin 109 174 5.1E-16 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 JV59_27325 f290b0b12dac2739d0bc1c639f7dc657 211 PIRSF PIRSF028688 1 211 1.2E-119 T 14-10-2018 IPR014549 Flagellar protein FlgO JV59_18000 9664503693cea067930442674ac8fbc9 135 SUPERFAMILY SSF55729 12 130 3.38E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_18000 9664503693cea067930442674ac8fbc9 135 Gene3D G3DSA:3.40.630.30 1 133 5.1E-33 T 14-10-2018 JV59_18000 9664503693cea067930442674ac8fbc9 135 Pfam PF13673 Acetyltransferase (GNAT) domain 36 131 1.3E-13 T 14-10-2018 IPR000182 GNAT domain JV59_32910 232ac13eff4df56b2b721ce1c2f85f52 427 PIRSF PIRSF006066 1 426 7.3E-74 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 JV59_32910 232ac13eff4df56b2b721ce1c2f85f52 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 1.3E-105 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 JV59_32910 232ac13eff4df56b2b721ce1c2f85f52 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 2.3E-100 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit JV59_21230 6c47f03f536c78c589491dbdf957cd08 349 Gene3D G3DSA:3.40.50.1820 26 257 2.9E-5 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_01590 93c58753545277a62c26bfdbfb089210 337 PIRSF PIRSF002825 1 337 8.1E-102 T 14-10-2018 IPR026045 Ferric binding protein JV59_01590 93c58753545277a62c26bfdbfb089210 337 Gene3D G3DSA:3.40.190.10 120 328 3.2E-126 T 14-10-2018 JV59_01590 93c58753545277a62c26bfdbfb089210 337 Pfam PF13343 Bacterial extracellular solute-binding protein 72 295 1.7E-17 T 14-10-2018 JV59_01590 93c58753545277a62c26bfdbfb089210 337 SUPERFAMILY SSF53850 24 332 3.12E-76 T 14-10-2018 JV59_01590 93c58753545277a62c26bfdbfb089210 337 Gene3D G3DSA:3.40.190.10 25 297 3.2E-126 T 14-10-2018 JV59_30475 d58f3ba1379e053d3f31e345e9a0aa42 65 Pfam PF11661 Protein of unknown function (DUF2986) 1 43 3.0E-21 T 14-10-2018 IPR021677 Protein of unknown function DUF2986 JV59_22170 f1cf15c907c52b7fe725fe9634b91018 354 SUPERFAMILY SSF51569 22 341 1.36E-114 T 14-10-2018 JV59_22170 f1cf15c907c52b7fe725fe9634b91018 354 Gene3D G3DSA:3.20.20.70 5 346 2.4E-138 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_22170 f1cf15c907c52b7fe725fe9634b91018 354 Pfam PF00793 DAHP synthetase I family 39 335 9.4E-86 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 JV59_22170 f1cf15c907c52b7fe725fe9634b91018 354 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 17 345 4.6E-134 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 JV59_22170 f1cf15c907c52b7fe725fe9634b91018 354 PIRSF PIRSF001361 3 349 4.2E-142 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 JV59_33900 50247503c152e8e188858dacb92b6d78 129 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 4.3E-31 T 14-10-2018 IPR010824 Protein of unknown function DUF1425 JV59_33900 50247503c152e8e188858dacb92b6d78 129 Gene3D G3DSA:2.60.40.3230 18 128 1.9E-30 T 14-10-2018 IPR038483 YcfL-like superfamily JV59_26220 9965d28a2940c5ae1b874abd23750b4a 116 Pfam PF10973 Protein of unknown function (DUF2799) 27 107 9.9E-16 T 14-10-2018 IPR021242 Protein of unknown function DUF2799 JV59_28705 032ac149bb501c1eb80edbb9558bbe54 136 Pfam PF03479 Domain of unknown function (DUF296) 4 109 1.6E-22 T 14-10-2018 IPR005175 PPC domain JV59_28705 032ac149bb501c1eb80edbb9558bbe54 136 SUPERFAMILY SSF117856 3 129 4.97E-34 T 14-10-2018 JV59_28705 032ac149bb501c1eb80edbb9558bbe54 136 Gene3D G3DSA:3.30.1330.80 1 136 2.1E-46 T 14-10-2018 JV59_33135 e22b2b305aa46f320faec4b29dcb2e93 248 Pfam PF02698 DUF218 domain 62 182 1.3E-18 T 14-10-2018 IPR003848 Domain of unknown function DUF218 JV59_18085 dad196cfb2ed4ac7aefcea3908dbbf44 92 Gene3D G3DSA:3.10.50.40 2 92 2.0E-33 T 14-10-2018 JV59_18085 dad196cfb2ed4ac7aefcea3908dbbf44 92 SUPERFAMILY SSF54534 5 89 2.49E-25 T 14-10-2018 JV59_18085 dad196cfb2ed4ac7aefcea3908dbbf44 92 Pfam PF13616 PPIC-type PPIASE domain 13 89 1.1E-22 T 14-10-2018 JV59_39520 dcffb74f08c5533d29d4d21c4f2bcbbb 259 SUPERFAMILY SSF53335 5 254 6.15E-74 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_39520 dcffb74f08c5533d29d4d21c4f2bcbbb 259 Pfam PF04445 Putative SAM-dependent methyltransferase 18 254 1.9E-107 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 JV59_39520 dcffb74f08c5533d29d4d21c4f2bcbbb 259 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 256 39.541 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 JV59_39520 dcffb74f08c5533d29d4d21c4f2bcbbb 259 Gene3D G3DSA:3.40.1630.10 1 56 1.8E-20 T 14-10-2018 JV59_39520 dcffb74f08c5533d29d4d21c4f2bcbbb 259 Gene3D G3DSA:3.40.50.150 57 259 7.1E-75 T 14-10-2018 JV59_32000 6f05ae67d5cee3902466ec56bbd5fbd4 508 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 2.6E-140 T 14-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane JV59_35180 8304ba137953861a18a31d8317794030 139 Pfam PF04347 Flagellar biosynthesis protein, FliO 51 134 4.7E-18 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 JV59_35180 8304ba137953861a18a31d8317794030 139 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 39 106 2.9E-21 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 JV59_25070 741d138376abfaddb1e3ff0c89496036 273 Gene3D G3DSA:3.60.60.10 2 271 7.7E-24 T 14-10-2018 JV59_25070 741d138376abfaddb1e3ff0c89496036 273 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 155 248 2.9E-5 T 14-10-2018 IPR005079 Peptidase C45 JV59_29195 88e0b9cd992cac4544eafa7a4d86fc41 161 Pfam PF11220 Protein of unknown function (DUF3015) 22 159 1.4E-48 T 14-10-2018 IPR021383 Protein of unknown function DUF3015 JV59_29155 42d874dca851716b83c79ff34a9f0df9 393 Pfam PF17327 Acyl homoserine lactone synthase 20 388 5.7E-139 T 14-10-2018 IPR035304 Acyl homoserine lactone synthase GO:0009372|GO:0061579 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 JV59_29155 42d874dca851716b83c79ff34a9f0df9 393 ProDom PD037532 SYNTHASE LACTONE HOMOSERINE AUTOINDUCER N-OCTANOYL VANM AINS LUXM SYNTHESIS 182 384 3.0E-23 T 14-10-2018 IPR020384 Homoserine lactone synthase LuxM/VanM, C-terminal GO:0016747 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 JV59_34235 a73b1d3a6ce5c3b2f8e793475a87e0a3 248 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 24 93 8.9E-12 T 14-10-2018 IPR032871 AHH domain-containing protein JV59_24985 95668effb37a08e16730c24b95278658 167 SUPERFAMILY SSF52833 3 162 1.91E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_24985 95668effb37a08e16730c24b95278658 167 Gene3D G3DSA:3.40.30.10 1 166 7.1E-43 T 14-10-2018 JV59_24985 95668effb37a08e16730c24b95278658 167 Pfam PF08534 Redoxin 19 158 1.8E-20 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 JV59_01255 90af5bdfa586f9fb439e63555aa58c0d 517 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 119 373 2.3E-83 T 14-10-2018 IPR008766 Replication gene A protein GO:0006260 JV59_29960 9ee1411ddc8f2df320d11967b16f2fc3 179 Gene3D G3DSA:3.40.50.300 2 177 5.9E-7 T 14-10-2018 JV59_29960 9ee1411ddc8f2df320d11967b16f2fc3 179 SUPERFAMILY SSF52540 3 172 2.67E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_29960 9ee1411ddc8f2df320d11967b16f2fc3 179 Pfam PF13521 AAA domain 5 168 2.9E-40 T 14-10-2018 IPR038727 NadR/Ttd14, AAA domain JV59_27600 74d2638f7ec3797538334a7c7b2ef2f7 145 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 3 144 3.0E-62 T 14-10-2018 IPR020206 Uncharacterised protein family, VP2110 JV59_27600 74d2638f7ec3797538334a7c7b2ef2f7 145 Pfam PF10952 Protein of unknown function (DUF2753) 6 145 5.2E-76 T 14-10-2018 IPR020206 Uncharacterised protein family, VP2110 JV59_27300 b175343e2d3f134502fb3df1a44e2724 258 Pfam PF13489 Methyltransferase domain 19 184 1.1E-17 T 14-10-2018 JV59_27300 b175343e2d3f134502fb3df1a44e2724 258 SUPERFAMILY SSF53335 4 205 3.47E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_27300 b175343e2d3f134502fb3df1a44e2724 258 Gene3D G3DSA:3.40.50.150 2 216 1.8E-33 T 14-10-2018 JV59_21250 14209f836d410c26c987b6ea08660423 241 SUPERFAMILY SSF56235 43 225 2.52E-47 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JV59_21250 14209f836d410c26c987b6ea08660423 241 Gene3D G3DSA:1.10.439.10 20 179 3.9E-47 T 14-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 JV59_21250 14209f836d410c26c987b6ea08660423 241 Pfam PF01804 Penicillin amidase 45 208 6.4E-49 T 14-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 JV59_20295 175c8bca2607c3dc9764f1f2a4eda510 255 Pfam PF01925 Sulfite exporter TauE/SafE 6 247 3.7E-38 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 JV59_24140 66329afe55856500fe0b071b088b66b2 306 Pfam PF04018 Domain of unknown function (DUF368) 13 257 9.2E-97 T 14-10-2018 IPR007163 Protein of unknown function DUF368 JV59_31275 afcfcc6c0ebacf4f905d295e31ccc34a 136 Pfam PF13474 SnoaL-like domain 34 121 7.3E-5 T 14-10-2018 IPR037401 SnoaL-like domain JV59_31275 afcfcc6c0ebacf4f905d295e31ccc34a 136 Gene3D G3DSA:3.10.450.50 28 136 6.4E-19 T 14-10-2018 JV59_31275 afcfcc6c0ebacf4f905d295e31ccc34a 136 SUPERFAMILY SSF54427 25 135 2.62E-17 T 14-10-2018 IPR032710 NTF2-like domain superfamily JV59_33955 8a2836b4040db1dbcb3f10a073d7347f 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 5 150 36.079 T 14-10-2018 IPR007334 Uncharacterised protein family UPF0208 JV59_33955 8a2836b4040db1dbcb3f10a073d7347f 150 Pfam PF04217 Protein of unknown function, DUF412 8 146 3.1E-58 T 14-10-2018 IPR007334 Uncharacterised protein family UPF0208 JV59_26405 64509edf2903008d0bc76bedde2b8e21 143 Pfam PF14467 Domain of unknown function (DUF4426) 23 142 4.1E-50 T 14-10-2018 IPR025218 Domain of unknown function DUF4426 JV59_26405 64509edf2903008d0bc76bedde2b8e21 143 Gene3D G3DSA:2.60.40.3340 14 143 1.1E-41 T 14-10-2018 JV59_25415 11f8729eeb398bbdbce766030c347039 424 Pfam PF07804 HipA-like C-terminal domain 163 351 3.8E-45 T 14-10-2018 IPR012893 HipA-like, C-terminal JV59_36155 949ac19b448036eabcac46ec316a7930 146 Pfam PF00571 CBS domain 79 127 4.3E-10 T 14-10-2018 IPR000644 CBS domain JV59_36155 949ac19b448036eabcac46ec316a7930 146 Pfam PF00571 CBS domain 4 58 1.3E-9 T 14-10-2018 IPR000644 CBS domain JV59_36155 949ac19b448036eabcac46ec316a7930 146 SMART SM00116 11 59 0.0015 T 14-10-2018 IPR000644 CBS domain JV59_36155 949ac19b448036eabcac46ec316a7930 146 SMART SM00116 84 131 5.6E-7 T 14-10-2018 IPR000644 CBS domain JV59_36155 949ac19b448036eabcac46ec316a7930 146 Gene3D G3DSA:3.10.580.10 1 146 6.1E-51 T 14-10-2018 JV59_36155 949ac19b448036eabcac46ec316a7930 146 SUPERFAMILY SSF54631 1 132 3.54E-32 T 14-10-2018 JV59_00855 03b1195b765dbdb045250c22a614ab65 200 Pfam PF01725 Ham1 family 6 193 2.0E-57 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 JV59_00855 03b1195b765dbdb045250c22a614ab65 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 5 196 5.5E-64 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 JV59_00855 03b1195b765dbdb045250c22a614ab65 200 SUPERFAMILY SSF52972 3 197 2.62E-73 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like JV59_00855 03b1195b765dbdb045250c22a614ab65 200 Hamap MF_01405 dITP/XTP pyrophosphatase. 4 198 50.07 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 JV59_00855 03b1195b765dbdb045250c22a614ab65 200 Gene3D G3DSA:3.90.950.10 1 200 1.6E-81 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like JV59_33250 30a0bc57009a0434ec8851e8f668cde1 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 JV59_33250 30a0bc57009a0434ec8851e8f668cde1 396 PIRSF PIRSF001413 1 395 9.1E-168 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 JV59_33250 30a0bc57009a0434ec8851e8f668cde1 396 Gene3D G3DSA:3.40.50.1100 53 383 5.1E-183 T 14-10-2018 JV59_33250 30a0bc57009a0434ec8851e8f668cde1 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 373 5.4E-49 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme JV59_33250 30a0bc57009a0434ec8851e8f668cde1 396 Gene3D G3DSA:3.40.50.1100 9 204 5.1E-183 T 14-10-2018 JV59_33250 30a0bc57009a0434ec8851e8f668cde1 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 388 9.8E-194 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 JV59_33250 30a0bc57009a0434ec8851e8f668cde1 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.97 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 JV59_33250 30a0bc57009a0434ec8851e8f668cde1 396 SUPERFAMILY SSF53686 5 387 1.44E-141 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JV59_22770 40b9e0f9a56ac2f8f6567ab04b31d798 342 Pfam PF10282 Lactonase, 7-bladed beta-propeller 9 339 1.1E-89 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller JV59_22770 40b9e0f9a56ac2f8f6567ab04b31d798 342 SUPERFAMILY SSF75011 8 314 1.57E-24 T 14-10-2018 JV59_22770 40b9e0f9a56ac2f8f6567ab04b31d798 342 Gene3D G3DSA:2.130.10.10 1 341 6.8E-85 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 JV59_23540 85debbc7f7c11aa6c59d243f731c0869 166 SUPERFAMILY SSF55961 4 154 5.0E-15 T 14-10-2018 JV59_23540 85debbc7f7c11aa6c59d243f731c0869 166 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 6 154 2.2E-13 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase JV59_23540 85debbc7f7c11aa6c59d243f731c0869 166 Gene3D G3DSA:3.30.530.20 2 156 7.5E-17 T 14-10-2018 IPR023393 START-like domain superfamily JV59_31740 2c069d561722e6038d6d19364e33f4d4 295 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 87 265 8.6E-21 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 JV59_31740 2c069d561722e6038d6d19364e33f4d4 295 Gene3D G3DSA:3.20.20.60 40 293 4.6E-39 T 14-10-2018 JV59_31740 2c069d561722e6038d6d19364e33f4d4 295 SUPERFAMILY SSF51621 74 265 2.86E-34 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JV59_23310 d6bb3f4f9df14eb6bf44cae2cf842f3b 473 SUPERFAMILY SSF89550 142 355 1.39E-22 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 JV59_23310 d6bb3f4f9df14eb6bf44cae2cf842f3b 473 Gene3D G3DSA:3.20.20.140 135 358 4.3E-33 T 14-10-2018 JV59_40125 a6022b2ebb9c3c4c69a82944e5852f53 322 PIRSF PIRSF003097 23 318 2.6E-59 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 JV59_01855 4e3f7169f4bb5cf99feb8c37348ae4c2 142 PIRSF PIRSF026426 1 142 9.7E-48 T 14-10-2018 IPR010865 Protein of unknown function DUF1499 JV59_01855 4e3f7169f4bb5cf99feb8c37348ae4c2 142 Pfam PF07386 Protein of unknown function (DUF1499) 30 134 1.2E-24 T 14-10-2018 IPR010865 Protein of unknown function DUF1499 JV59_28725 34b50388727f73a15c8c4b7d4cd9a2e7 101 Pfam PF07383 Protein of unknown function (DUF1496) 33 80 1.1E-18 T 14-10-2018 IPR009971 Protein of unknown function DUF1496 JV59_29780 ef6df5519f61a59fdb2a740636937a73 396 Gene3D G3DSA:3.30.160.660 211 312 1.2E-14 T 14-10-2018 JV59_29780 ef6df5519f61a59fdb2a740636937a73 396 Gene3D G3DSA:1.10.490.140 77 350 1.2E-14 T 14-10-2018 JV59_29780 ef6df5519f61a59fdb2a740636937a73 396 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 66 362 4.0E-33 T 14-10-2018 IPR003776 YcaO-like domain JV59_29780 ef6df5519f61a59fdb2a740636937a73 396 Gene3D G3DSA:2.40.50.820 96 175 1.2E-14 T 14-10-2018 JV59_39665 baf42f4d1c20209f1018f5dcf4458d39 162 Pfam PF10675 Protein of unknown function (DUF2489) 14 144 5.4E-44 T 14-10-2018 IPR019617 Domain of unknown function DUF2489 JV59_37205 03212984544d9c41132c521ee0d6b80a 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 2.0E-172 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 JV59_37205 03212984544d9c41132c521ee0d6b80a 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 9.6E-160 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 JV59_37205 03212984544d9c41132c521ee0d6b80a 376 PIRSF PIRSF015658 1 376 7.7E-180 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 JV59_38680 1e8967cac78a3f2c91ec863831391061 316 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 10 303 1.4E-75 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 JV59_38680 1e8967cac78a3f2c91ec863831391061 316 PIRSF PIRSF026649 7 312 1.2E-79 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 JV59_38680 1e8967cac78a3f2c91ec863831391061 316 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 10 309 7.6E-130 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 JV59_38680 1e8967cac78a3f2c91ec863831391061 316 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 9 315 45.472 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 JV59_38390 b00d498015bc62cf45929c4bff63b345 296 Pfam PF02219 Methylenetetrahydrofolate reductase 17 291 4.6E-102 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 JV59_38390 b00d498015bc62cf45929c4bff63b345 296 SUPERFAMILY SSF51730 22 294 8.04E-96 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like JV59_38390 b00d498015bc62cf45929c4bff63b345 296 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 7.1E-104 T 14-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 JV59_38390 b00d498015bc62cf45929c4bff63b345 296 Gene3D G3DSA:3.20.20.220 1 296 2.8E-113 T 14-10-2018 JV59_22405 d4307d078846868e2e45d136f3943833 104 Pfam PF11196 Protein of unknown function (DUF2834) 4 99 1.5E-31 T 14-10-2018 IPR021362 Protein of unknown function DUF2834 JV59_36460 79f45c97541c6ddf9110a5534e9c998d 241 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 240 2.5E-85 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 JV59_36460 79f45c97541c6ddf9110a5534e9c998d 241 SUPERFAMILY SSF75217 4 172 1.18E-36 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases JV59_36460 79f45c97541c6ddf9110a5534e9c998d 241 Gene3D G3DSA:3.40.1280.10 1 164 1.4E-62 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JV59_36460 79f45c97541c6ddf9110a5534e9c998d 241 PIRSF PIRSF004808 1 241 8.8E-73 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 JV59_36460 79f45c97541c6ddf9110a5534e9c998d 241 Gene3D G3DSA:1.10.8.590 173 241 1.2E-28 T 14-10-2018 JV59_36460 79f45c97541c6ddf9110a5534e9c998d 241 Pfam PF00588 SpoU rRNA Methylase family 5 153 9.9E-35 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 JV59_16160 22944cec787e2dfcb65fef75d61203da 203 Pfam PF01810 LysE type translocator 12 202 2.3E-30 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_16160 22944cec787e2dfcb65fef75d61203da 203 PIRSF PIRSF006324 1 203 1.3E-48 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_36645 22927c47278a028cf3b2b89284c85c3b 143 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 6 139 1.8E-13 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain JV59_36645 22927c47278a028cf3b2b89284c85c3b 143 Gene3D G3DSA:2.40.10.330 72 128 2.4E-43 T 14-10-2018 JV59_36645 22927c47278a028cf3b2b89284c85c3b 143 Gene3D G3DSA:3.10.50.40 13 140 2.4E-43 T 14-10-2018 JV59_36645 22927c47278a028cf3b2b89284c85c3b 143 SUPERFAMILY SSF54534 6 142 7.07E-37 T 14-10-2018 JV59_21470 5003becfaf732fd09f30087d4bf8cdb9 160 SUPERFAMILY SSF64288 15 144 2.2E-12 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JV59_21470 5003becfaf732fd09f30087d4bf8cdb9 160 Gene3D G3DSA:3.40.1410.10 6 148 3.1E-11 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JV59_28400 e674bd307418cbfa9af36002434b88e6 267 Pfam PF02698 DUF218 domain 80 242 1.2E-26 T 14-10-2018 IPR003848 Domain of unknown function DUF218 JV59_28100 4a830a7e4bbaa28b2c2df6bf453b16fa 309 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 142 169 7.6E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_28100 4a830a7e4bbaa28b2c2df6bf453b16fa 309 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 171 200 7.6E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_28100 4a830a7e4bbaa28b2c2df6bf453b16fa 309 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 97 7.6E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 JV59_28100 4a830a7e4bbaa28b2c2df6bf453b16fa 309 SMART SM00283 37 298 1.7E-13 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_28100 4a830a7e4bbaa28b2c2df6bf453b16fa 309 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 109 269 2.3E-30 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 JV59_28100 4a830a7e4bbaa28b2c2df6bf453b16fa 309 SUPERFAMILY SSF58104 41 295 6.54E-46 T 14-10-2018 JV59_28100 4a830a7e4bbaa28b2c2df6bf453b16fa 309 Gene3D G3DSA:1.10.287.950 11 300 1.3E-43 T 14-10-2018 JV59_18065 5bb60e6807eac3eeccfc0353af355469 85 Pfam PF03891 Domain of unknown function (DUF333) 34 79 1.7E-17 T 14-10-2018 IPR005590 Protein of unknown function DUF333 JV59_30610 4966e2ca0062a286cbc0f475813c17c3 67 Gene3D G3DSA:3.90.820.10 1 67 5.3E-29 T 14-10-2018 JV59_30610 4966e2ca0062a286cbc0f475813c17c3 67 SMART SM00923 1 51 2.7E-21 T 14-10-2018 IPR005153 MbtH-like domain JV59_30610 4966e2ca0062a286cbc0f475813c17c3 67 Pfam PF03621 MbtH-like protein 3 51 1.6E-20 T 14-10-2018 IPR005153 MbtH-like domain JV59_30610 4966e2ca0062a286cbc0f475813c17c3 67 SUPERFAMILY SSF160582 3 66 7.06E-27 T 14-10-2018 IPR038020 MbtH-like domain superfamily JV59_20975 67c1b454312f7eb853fc02d14895784e 293 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 91 279 1.1E-24 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 JV59_20975 67c1b454312f7eb853fc02d14895784e 293 Pfam PF02592 Putative vitamin uptake transporter 113 273 1.1E-31 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 JV59_20975 67c1b454312f7eb853fc02d14895784e 293 Hamap MF_02088 Probable queuosine precursor transporter. 79 286 14.014 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 JV59_32310 1cfd955c1edf9457f2ef57927364cd44 697 Pfam PF05876 Phage terminase large subunit (GpA) 48 656 1.7E-133 T 14-10-2018 IPR008866 Bacteriophage lambda, GpA JV59_27160 22bab399af43e3f9bba332cba3e857a2 351 PRINTS PR00184 Neisseria sp. porin signature 165 182 7.6E-11 T 14-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 JV59_27160 22bab399af43e3f9bba332cba3e857a2 351 PRINTS PR00184 Neisseria sp. porin signature 340 351 7.6E-11 T 14-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 JV59_27160 22bab399af43e3f9bba332cba3e857a2 351 PRINTS PR00184 Neisseria sp. porin signature 70 95 7.6E-11 T 14-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 JV59_27160 22bab399af43e3f9bba332cba3e857a2 351 PRINTS PR00184 Neisseria sp. porin signature 107 126 7.6E-11 T 14-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 JV59_27160 22bab399af43e3f9bba332cba3e857a2 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 166 177 3.4E-8 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 JV59_27160 22bab399af43e3f9bba332cba3e857a2 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 68 79 3.4E-8 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 JV59_27160 22bab399af43e3f9bba332cba3e857a2 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 343 351 3.4E-8 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 JV59_27160 22bab399af43e3f9bba332cba3e857a2 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 109 119 3.4E-8 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 JV59_27160 22bab399af43e3f9bba332cba3e857a2 351 Pfam PF13609 Gram-negative porin 12 302 5.2E-33 T 14-10-2018 JV59_27160 22bab399af43e3f9bba332cba3e857a2 351 SUPERFAMILY SSF56935 36 351 6.72E-39 T 14-10-2018 JV59_27160 22bab399af43e3f9bba332cba3e857a2 351 Gene3D G3DSA:2.40.160.10 36 351 4.3E-38 T 14-10-2018 IPR023614 Porin domain superfamily JV59_17395 e70c0d9fed4052c1fdd40e11b2bba84f 252 Gene3D G3DSA:3.30.1150.10 157 252 8.7E-19 T 14-10-2018 JV59_17395 e70c0d9fed4052c1fdd40e11b2bba84f 252 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 175 251 1.6E-20 T 14-10-2018 IPR006260 TonB/TolA, C-terminal JV59_17395 e70c0d9fed4052c1fdd40e11b2bba84f 252 SUPERFAMILY SSF74653 173 249 3.27E-20 T 14-10-2018 JV59_17395 e70c0d9fed4052c1fdd40e11b2bba84f 252 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 174 251 3.7E-20 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 JV59_18445 8fc079532418ebf08a952be15fee7f5f 376 Pfam PF16113 Enoyl-CoA hydratase/isomerase 19 359 1.1E-106 T 14-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 JV59_18445 8fc079532418ebf08a952be15fee7f5f 376 SUPERFAMILY SSF52096 17 345 2.11E-53 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JV59_18445 8fc079532418ebf08a952be15fee7f5f 376 Gene3D G3DSA:3.90.226.10 3 376 3.4E-115 T 14-10-2018 JV59_23705 03219aa067dd15a243e354924cab8acc 477 Pfam PF03600 Citrate transporter 47 422 3.4E-52 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 JV59_33995 9164754f414144185999786fdc7ad68a 306 Gene3D G3DSA:1.10.3720.10 85 301 1.8E-22 T 14-10-2018 IPR035906 MetI-like superfamily JV59_33995 9164754f414144185999786fdc7ad68a 306 SUPERFAMILY SSF161098 89 291 1.31E-20 T 14-10-2018 IPR035906 MetI-like superfamily JV59_33995 9164754f414144185999786fdc7ad68a 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.1E-41 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_27805 9c97bacfdd64d157798ca111a5ac0638 271 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 200 262 2.6E-9 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) JV59_27805 9c97bacfdd64d157798ca111a5ac0638 271 SUPERFAMILY SSF101801 197 263 9.94E-9 T 14-10-2018 IPR036429 SpoA-like superfamily JV59_18610 a6e3b9c6655a096f0aa38fad4238cd8d 171 SUPERFAMILY SSF55729 3 152 8.21E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_18610 a6e3b9c6655a096f0aa38fad4238cd8d 171 Pfam PF13302 Acetyltransferase (GNAT) domain 8 148 1.8E-21 T 14-10-2018 IPR000182 GNAT domain JV59_18610 a6e3b9c6655a096f0aa38fad4238cd8d 171 Gene3D G3DSA:3.40.630.30 1 162 4.2E-31 T 14-10-2018 JV59_34355 c984137e4bfc725f194dba5c09fee1e2 199 Gene3D G3DSA:1.10.3210.10 4 199 3.4E-82 T 14-10-2018 JV59_34355 c984137e4bfc725f194dba5c09fee1e2 199 SUPERFAMILY SSF109604 9 189 5.02E-43 T 14-10-2018 JV59_34355 c984137e4bfc725f194dba5c09fee1e2 199 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 85 181 5.0E-34 T 14-10-2018 JV59_34355 c984137e4bfc725f194dba5c09fee1e2 199 Pfam PF13023 HD domain 16 161 7.7E-14 T 14-10-2018 IPR006674 HD domain JV59_34355 c984137e4bfc725f194dba5c09fee1e2 199 SMART SM00471 31 156 1.4E-6 T 14-10-2018 IPR003607 HD/PDEase domain JV59_34355 c984137e4bfc725f194dba5c09fee1e2 199 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 8 199 45.75 T 14-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 JV59_21785 73614920501e2858d389bc5438b739d9 397 SUPERFAMILY SSF53300 127 385 1.91E-16 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JV59_01010 2b3d8ff279b97a06e36fe656b272055f 368 Gene3D G3DSA:3.40.50.300 99 355 2.0E-87 T 14-10-2018 JV59_01010 2b3d8ff279b97a06e36fe656b272055f 368 SUPERFAMILY SSF52540 4 334 7.07E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_01010 2b3d8ff279b97a06e36fe656b272055f 368 Pfam PF00437 Type II/IV secretion system protein 28 268 2.4E-37 T 14-10-2018 IPR001482 Type II/IV secretion system protein JV59_01010 2b3d8ff279b97a06e36fe656b272055f 368 Gene3D G3DSA:3.30.450.90 1 97 5.6E-21 T 14-10-2018 JV59_01010 2b3d8ff279b97a06e36fe656b272055f 368 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 1.4E-125 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 JV59_33010 e0f95280eeb6d352b0fe50283a9de163 349 Pfam PF05128 Domain of unknown function (DUF697) 185 343 1.3E-47 T 14-10-2018 IPR021147 Protein of unknown function DUF697 JV59_33010 e0f95280eeb6d352b0fe50283a9de163 349 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 60 343 3.3E-74 T 14-10-2018 IPR006507 Uncharacterised protein family UPF0283 JV59_19585 2bd6b243e87ecbb16549ff6613b66069 389 SUPERFAMILY SSF103473 2 383 4.45E-42 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_19585 2bd6b243e87ecbb16549ff6613b66069 389 Gene3D G3DSA:1.20.1250.20 1 380 7.3E-40 T 14-10-2018 JV59_19585 2bd6b243e87ecbb16549ff6613b66069 389 Pfam PF07690 Major Facilitator Superfamily 251 381 3.9E-12 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_19585 2bd6b243e87ecbb16549ff6613b66069 389 Pfam PF07690 Major Facilitator Superfamily 9 244 5.0E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_31270 7f470797068495665679a7ee4b85824f 112 SUPERFAMILY SSF46785 12 109 1.88E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JV59_31270 7f470797068495665679a7ee4b85824f 112 Gene3D G3DSA:1.10.10.10 6 112 1.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JV59_31270 7f470797068495665679a7ee4b85824f 112 Pfam PF01638 HxlR-like helix-turn-helix 23 109 8.3E-20 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type JV59_32680 6cca2e9273b33eb69f33dcd5fe8f1ecf 173 SUPERFAMILY SSF55729 1 148 2.75E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_32680 6cca2e9273b33eb69f33dcd5fe8f1ecf 173 Gene3D G3DSA:3.40.630.30 1 157 8.3E-26 T 14-10-2018 JV59_32680 6cca2e9273b33eb69f33dcd5fe8f1ecf 173 Pfam PF13302 Acetyltransferase (GNAT) domain 6 146 9.4E-18 T 14-10-2018 IPR000182 GNAT domain JV59_16090 1c369c7b5dceadf3fd6b3fec4bf724a2 332 SUPERFAMILY SSF52540 11 179 1.58E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_16090 1c369c7b5dceadf3fd6b3fec4bf724a2 332 Gene3D G3DSA:3.40.50.300 7 207 3.2E-45 T 14-10-2018 JV59_16090 1c369c7b5dceadf3fd6b3fec4bf724a2 332 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 11 186 4.7E-40 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain JV59_37575 7ddc667ac32bf4477d386c37bc809edb 69 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 64 1.8E-22 T 14-10-2018 IPR014318 Phage shock protein, PspG JV59_37575 7ddc667ac32bf4477d386c37bc809edb 69 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 3 63 2.9E-20 T 14-10-2018 IPR014318 Phage shock protein, PspG JV59_29050 5ce3ceadebf3399d45b50368dd37cfa9 285 Pfam PF03280 Proteobacterial lipase chaperone protein 87 270 8.3E-43 T 14-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 JV59_29050 5ce3ceadebf3399d45b50368dd37cfa9 285 SUPERFAMILY SSF158855 32 282 1.96E-65 T 14-10-2018 JV59_31920 620bc1c6cddde753e2cd81806f043633 140 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 15 126 1.0E-16 T 14-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein JV59_31920 620bc1c6cddde753e2cd81806f043633 140 Pfam PF04965 Gene 25-like lysozyme 19 111 5.6E-13 T 14-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD JV59_31920 620bc1c6cddde753e2cd81806f043633 140 SUPERFAMILY SSF160719 51 121 1.23E-5 T 14-10-2018 JV59_19345 f33651a0d92045786f021415858b8222 813 Pfam PF02687 FtsX-like permease family 721 801 1.7E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JV59_30970 98b57512045b94aa86812071ecbc148d 200 Gene3D G3DSA:3.40.50.720 1 197 7.2E-43 T 14-10-2018 JV59_30970 98b57512045b94aa86812071ecbc148d 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 144 4.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_30970 98b57512045b94aa86812071ecbc148d 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 54 65 4.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_30970 98b57512045b94aa86812071ecbc148d 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 4.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_30970 98b57512045b94aa86812071ecbc148d 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 162 4.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JV59_30970 98b57512045b94aa86812071ecbc148d 200 SUPERFAMILY SSF51735 1 194 3.33E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_30970 98b57512045b94aa86812071ecbc148d 200 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 172 1.0E-19 T 14-10-2018 JV59_31420 20d83020f17aae9f8536788badd5843a 171 SUPERFAMILY SSF52540 1 100 1.05E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_31420 20d83020f17aae9f8536788badd5843a 171 Gene3D G3DSA:3.40.50.300 1 167 5.2E-10 T 14-10-2018 JV59_23360 e89b3ad6f43f04baa2226b50f07a7966 127 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 32 122 3.9E-13 T 14-10-2018 IPR010221 VCBS repeat JV59_32490 0f4722f2de5c129be1eb1a22d593d250 327 SUPERFAMILY SSF56935 43 299 4.35E-6 T 14-10-2018 JV59_32490 0f4722f2de5c129be1eb1a22d593d250 327 Pfam PF11383 Protein of unknown function (DUF3187) 19 320 1.2E-101 T 14-10-2018 IPR021523 Protein of unknown function DUF3187 JV59_26670 129a352c55c07e7a3b00cf13e99aaca0 259 Pfam PF01925 Sulfite exporter TauE/SafE 11 246 6.0E-41 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 JV59_38835 abf4f40bee5e464fbfef8dcb04252c63 626 SUPERFAMILY SSF50630 491 617 5.63E-30 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily JV59_38835 abf4f40bee5e464fbfef8dcb04252c63 626 Pfam PF05618 Putative ATP-dependant zinc protease 137 211 1.8E-6 T 14-10-2018 JV59_38835 abf4f40bee5e464fbfef8dcb04252c63 626 Pfam PF05618 Putative ATP-dependant zinc protease 491 620 1.5E-21 T 14-10-2018 JV59_38835 abf4f40bee5e464fbfef8dcb04252c63 626 SUPERFAMILY SSF50630 217 339 5.4E-16 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily JV59_38835 abf4f40bee5e464fbfef8dcb04252c63 626 SUPERFAMILY SSF50630 361 480 1.52E-10 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily JV59_38835 abf4f40bee5e464fbfef8dcb04252c63 626 SUPERFAMILY SSF50630 41 210 7.44E-23 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily JV59_38835 abf4f40bee5e464fbfef8dcb04252c63 626 Gene3D G3DSA:2.40.70.10 489 611 8.8E-30 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily JV59_38835 abf4f40bee5e464fbfef8dcb04252c63 626 Gene3D G3DSA:2.40.70.10 215 332 5.7E-6 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily JV59_38835 abf4f40bee5e464fbfef8dcb04252c63 626 Gene3D G3DSA:2.40.70.10 38 203 2.5E-16 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily JV59_21505 be94665fc1d70531fcb8945d7674967c 319 Pfam PF00795 Carbon-nitrogen hydrolase 5 280 8.1E-46 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 JV59_21505 be94665fc1d70531fcb8945d7674967c 319 Gene3D G3DSA:3.60.110.10 3 299 1.5E-61 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JV59_21505 be94665fc1d70531fcb8945d7674967c 319 SUPERFAMILY SSF56317 1 299 1.07E-59 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JV59_16015 331447f599fca60aaae9210561de7a81 426 Gene3D G3DSA:1.10.3720.10 164 425 1.3E-49 T 14-10-2018 IPR035906 MetI-like superfamily JV59_16015 331447f599fca60aaae9210561de7a81 426 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 226 414 1.3E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_16015 331447f599fca60aaae9210561de7a81 426 SUPERFAMILY SSF161098 38 416 6.98E-47 T 14-10-2018 IPR035906 MetI-like superfamily JV59_25755 06b7a1365ef3f91fe837fd4cb68cb325 117 Gene3D G3DSA:1.20.120.160 9 115 2.5E-10 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_25755 06b7a1365ef3f91fe837fd4cb68cb325 117 Pfam PF01627 Hpt domain 37 93 5.6E-5 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 JV59_25755 06b7a1365ef3f91fe837fd4cb68cb325 117 SUPERFAMILY SSF47226 13 115 2.22E-11 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_37195 36a19ac12e307cf9d01466460eb555ed 153 Pfam PF09335 SNARE associated Golgi protein 51 148 1.2E-12 T 14-10-2018 IPR032816 SNARE associated Golgi protein JV59_39615 baac4368a4486895a7f5b8a51a0d93ac 142 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 8.6E-27 T 14-10-2018 JV59_39615 baac4368a4486895a7f5b8a51a0d93ac 142 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 8.6E-27 T 14-10-2018 JV59_39615 baac4368a4486895a7f5b8a51a0d93ac 142 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 8.6E-27 T 14-10-2018 JV59_39615 baac4368a4486895a7f5b8a51a0d93ac 142 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 2.4E-32 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 JV59_39615 baac4368a4486895a7f5b8a51a0d93ac 142 Pfam PF02416 mttA/Hcf106 family 4 32 1.0E-4 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 JV59_39615 baac4368a4486895a7f5b8a51a0d93ac 142 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 142 18.576 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 JV59_21790 473e04bd9e6f0aba2a42eb7116b46c2a 188 Pfam PF16964 Putative tight adherence pilin protein F 5 184 5.5E-21 T 14-10-2018 IPR031582 Putative tight adherence pilin protein F JV59_22050 08fc34029a129dece6d99642491ceee1 96 SUPERFAMILY SSF54909 1 91 7.84E-30 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_22050 08fc34029a129dece6d99642491ceee1 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 78 7.1E-17 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain JV59_22050 08fc34029a129dece6d99642491ceee1 96 Gene3D G3DSA:3.30.70.100 1 96 1.9E-28 T 14-10-2018 JV59_17445 de96b6a53bc09c2aeb632796fcd63fe4 161 SUPERFAMILY SSF54637 8 154 7.03E-40 T 14-10-2018 IPR029069 HotDog domain superfamily JV59_17445 de96b6a53bc09c2aeb632796fcd63fe4 161 Pfam PF03061 Thioesterase superfamily 22 97 3.9E-16 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 JV59_17445 de96b6a53bc09c2aeb632796fcd63fe4 161 Gene3D G3DSA:3.10.129.10 2 160 2.9E-42 T 14-10-2018 JV59_31635 edb755e461ded1133084d6b534fec180 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 30.384 T 14-10-2018 IPR007040 Ribosome modulation factor JV59_31635 edb755e461ded1133084d6b534fec180 57 Gene3D G3DSA:1.10.10.620 1 57 5.7E-29 T 14-10-2018 IPR023200 Ribosome modulation factor domain superfamily JV59_31635 edb755e461ded1133084d6b534fec180 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 51 6.0E-21 T 14-10-2018 IPR007040 Ribosome modulation factor JV59_31635 edb755e461ded1133084d6b534fec180 57 Pfam PF04957 Ribosome modulation factor 1 54 9.7E-29 T 14-10-2018 IPR007040 Ribosome modulation factor JV59_32565 41f349bfdcfb94589935d3158aeace54 379 Pfam PF04209 homogentisate 1,2-dioxygenase 86 375 9.9E-22 T 14-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 JV59_32565 41f349bfdcfb94589935d3158aeace54 379 Gene3D G3DSA:2.60.120.10 64 167 2.0E-13 T 14-10-2018 IPR014710 RmlC-like jelly roll fold JV59_32565 41f349bfdcfb94589935d3158aeace54 379 SUPERFAMILY SSF51182 76 375 2.56E-91 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily JV59_23415 a6011db1b7c9a3ba49dd35306216053a 204 SUPERFAMILY SSF54001 20 198 1.77E-14 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily JV59_23415 a6011db1b7c9a3ba49dd35306216053a 204 Gene3D G3DSA:3.90.70.20 13 203 1.8E-15 T 14-10-2018 JV59_23415 a6011db1b7c9a3ba49dd35306216053a 204 Pfam PF03543 Yersinia/Haemophilus virulence surface antigen 20 186 4.6E-11 T 14-10-2018 IPR006473 Peptidase C58, YopT-type domain GO:0004197|GO:0009405 JV59_25920 c9ab3cf6e851cf9018cd415fc327a3b9 109 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 3.8E-15 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain JV59_25920 c9ab3cf6e851cf9018cd415fc327a3b9 109 SUPERFAMILY SSF54909 1 99 3.96E-27 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_25920 c9ab3cf6e851cf9018cd415fc327a3b9 109 Gene3D G3DSA:3.30.70.100 1 93 2.3E-23 T 14-10-2018 JV59_33575 ab3943b43e9cee5c7903c0aa6d73bc7c 66 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 9.6E-18 T 14-10-2018 IPR025346 Protein of unknown function DUF4250 JV59_25395 e4b6dddd91ec3f48265bc7d6835765e7 148 Pfam PF04191 Phospholipid methyltransferase 36 136 2.0E-18 T 14-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 JV59_25395 e4b6dddd91ec3f48265bc7d6835765e7 148 Gene3D G3DSA:1.20.120.1630 2 148 4.1E-25 T 14-10-2018 JV59_27225 25bdce5752e1864878ce58ef63749e8a 251 Pfam PF01925 Sulfite exporter TauE/SafE 10 249 3.3E-38 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 JV59_34690 17683ad27de21a25af9b7b85691a74ae 93 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 93 21.127 T 14-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 JV59_34690 17683ad27de21a25af9b7b85691a74ae 93 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 80 4.8E-18 T 14-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 JV59_00865 cd586d24fadd31ebe9f3960129afcfe0 324 Gene3D G3DSA:1.10.443.10 163 324 2.0E-38 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JV59_00865 cd586d24fadd31ebe9f3960129afcfe0 324 Gene3D G3DSA:1.10.150.130 55 162 4.9E-5 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal JV59_00865 cd586d24fadd31ebe9f3960129afcfe0 324 SUPERFAMILY SSF56349 59 313 5.59E-44 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JV59_00865 cd586d24fadd31ebe9f3960129afcfe0 324 Pfam PF00589 Phage integrase family 163 306 8.6E-16 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JV59_23370 321b9d3f12166e9b203a6b70bfe714ea 276 Gene3D G3DSA:1.10.3210.10 1 274 1.5E-68 T 14-10-2018 JV59_23370 321b9d3f12166e9b203a6b70bfe714ea 276 SUPERFAMILY SSF109604 5 229 3.77E-57 T 14-10-2018 JV59_23370 321b9d3f12166e9b203a6b70bfe714ea 276 Pfam PF08668 HDOD domain 13 204 3.0E-55 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD JV59_24160 b2751657b9c74ec7c69a66339f935e36 296 SUPERFAMILY SSF103481 215 295 4.58E-9 T 14-10-2018 JV59_24160 b2751657b9c74ec7c69a66339f935e36 296 Pfam PF00892 EamA-like transporter family 5 138 1.6E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_24160 b2751657b9c74ec7c69a66339f935e36 296 Pfam PF00892 EamA-like transporter family 151 294 5.4E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JV59_24160 b2751657b9c74ec7c69a66339f935e36 296 SUPERFAMILY SSF103481 44 141 2.62E-6 T 14-10-2018 JV59_16145 e34fc6b0c036d94426ec467ddfe08098 137 Gene3D G3DSA:3.30.160.20 1 137 2.7E-37 T 14-10-2018 JV59_16145 e34fc6b0c036d94426ec467ddfe08098 137 SUPERFAMILY SSF75620 9 112 2.94E-11 T 14-10-2018 JV59_16145 e34fc6b0c036d94426ec467ddfe08098 137 Pfam PF00472 RF-1 domain 7 132 1.8E-23 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 JV59_16145 e34fc6b0c036d94426ec467ddfe08098 137 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 JV59_34800 0aea7c6772030eea22a6cb63e7618185 490 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 476 43.801 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 JV59_34800 0aea7c6772030eea22a6cb63e7618185 490 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 6 458 2.0E-151 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 JV59_37335 606f0522b64b64198c3884bfffba2c04 423 Pfam PF01566 Natural resistance-associated macrophage protein 40 388 1.7E-7 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 JV59_30385 55d503c21b73ea6f146c7c4d2847588f 452 Pfam PF01618 MotA/TolQ/ExbB proton channel family 313 426 4.5E-30 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel JV59_30385 55d503c21b73ea6f146c7c4d2847588f 452 PIRSF PIRSF037714 1 450 9.9E-155 T 14-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein JV59_27550 514d080f256765951c7e30802a6dd41d 78 SUPERFAMILY SSF64307 5 73 5.1E-11 T 14-10-2018 IPR036868 TusA-like domain superfamily JV59_27550 514d080f256765951c7e30802a6dd41d 78 Gene3D G3DSA:3.30.110.40 2 73 4.2E-11 T 14-10-2018 IPR036868 TusA-like domain superfamily JV59_27550 514d080f256765951c7e30802a6dd41d 78 Pfam PF01206 Sulfurtransferase TusA 6 72 1.5E-12 T 14-10-2018 IPR001455 TusA-like domain JV59_01990 4016179c68f5eda3e5f0d6cd5fba777c 189 Pfam PF04972 BON domain 45 112 4.5E-10 T 14-10-2018 IPR007055 BON domain JV59_01990 4016179c68f5eda3e5f0d6cd5fba777c 189 Pfam PF04972 BON domain 122 186 1.8E-16 T 14-10-2018 IPR007055 BON domain JV59_01990 4016179c68f5eda3e5f0d6cd5fba777c 189 SMART SM00749 127 189 7.8E-4 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria JV59_01990 4016179c68f5eda3e5f0d6cd5fba777c 189 SMART SM00749 50 113 9.0 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria JV59_17695 91c2804497e11c2a2ad5cd2ea1ac56ef 449 Pfam PF06123 Inner membrane protein CreD 9 429 6.4E-148 T 14-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD JV59_17695 91c2804497e11c2a2ad5cd2ea1ac56ef 449 PIRSF PIRSF004548 1 444 8.2E-143 T 14-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD JV59_31640 6181f6f1722e8bd2391dba2a9ce5a189 526 Pfam PF11949 Protein of unknown function (DUF3466) 259 526 1.6E-51 T 14-10-2018 IPR022562 Protein of unknown function DUF3466 JV59_31640 6181f6f1722e8bd2391dba2a9ce5a189 526 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 507 526 1.1E-4 T 14-10-2018 IPR020008 GlyGly-CTERM domain JV59_40090 a124632274fba02daa31cafeee8c9f2c 207 Pfam PF07947 YhhN family 26 205 6.0E-28 T 14-10-2018 IPR012506 YhhN-like GO:0016021 JV59_32605 cff6a1d918b0750f30f5d3cd443058a1 124 SUPERFAMILY SSF54427 1 122 2.37E-35 T 14-10-2018 IPR032710 NTF2-like domain superfamily JV59_32605 cff6a1d918b0750f30f5d3cd443058a1 124 Gene3D G3DSA:3.10.450.50 1 124 3.0E-36 T 14-10-2018 JV59_32605 cff6a1d918b0750f30f5d3cd443058a1 124 Pfam PF12680 SnoaL-like domain 7 102 8.7E-11 T 14-10-2018 IPR037401 SnoaL-like domain JV59_26940 28ced3d78bf5de927f335bedd1b04a32 228 Pfam PF06930 Protein of unknown function (DUF1282) 14 223 6.7E-47 T 14-10-2018 IPR009698 Protein of unknown function DUF1282 JV59_27525 2f89bd476eda7a2f7114dafd1a2f57f4 406 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 18 249 5.3E-67 T 14-10-2018 IPR018642 Protein of unknown function DUF2066 JV59_24630 7fbdf69f6f7534cd96033851d704a161 174 Pfam PF14435 SUKH-4 immunity protein 3 156 1.2E-9 T 14-10-2018 IPR025851 SUKH-4 immunity protein JV59_21205 b73271d40a031360716de1b5664b2b04 93 PIRSF PIRSF028784 1 93 8.0E-29 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 JV59_21205 b73271d40a031360716de1b5664b2b04 93 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 34 85 3.6E-16 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 JV59_34380 2437193efe102ccbb5672f257bcd0116 160 Pfam PF03942 DTW domain 2 146 3.8E-33 T 14-10-2018 IPR005636 DTW JV59_34380 2437193efe102ccbb5672f257bcd0116 160 SMART SM01144 1 151 4.2E-23 T 14-10-2018 IPR005636 DTW JV59_01215 b5eafc1c7b23c8d6abd1dbc9fef83d6b 794 Pfam PF03968 OstA-like protein 66 198 1.6E-18 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal JV59_01215 b5eafc1c7b23c8d6abd1dbc9fef83d6b 794 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 3 766 20.081 T 14-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 JV59_01215 b5eafc1c7b23c8d6abd1dbc9fef83d6b 794 Pfam PF04453 Organic solvent tolerance protein 306 695 8.1E-114 T 14-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 JV59_01215 b5eafc1c7b23c8d6abd1dbc9fef83d6b 794 Gene3D G3DSA:2.60.450.10 59 119 2.0E-7 T 14-10-2018 JV59_16070 32dc8b1f5fa1835753c11e066ce89bcd 590 Pfam PF08811 Protein of unknown function (DUF1800) 11 520 1.0E-68 T 14-10-2018 IPR014917 Protein of unknown function DUF1800 JV59_23135 64ee451702d84411d7ad713386c4ab4c 405 Gene3D G3DSA:3.40.50.300 107 398 1.6E-56 T 14-10-2018 JV59_23135 64ee451702d84411d7ad713386c4ab4c 405 SUPERFAMILY SSF52540 108 366 3.71E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_23135 64ee451702d84411d7ad713386c4ab4c 405 Gene3D G3DSA:1.10.1660.30 36 102 4.5E-5 T 14-10-2018 JV59_23135 64ee451702d84411d7ad713386c4ab4c 405 Pfam PF13614 AAA domain 110 295 6.5E-23 T 14-10-2018 IPR025669 AAA domain JV59_23285 b19356a5645e6eeb33b44310cd48a840 114 SUPERFAMILY SSF103481 11 109 4.32E-18 T 14-10-2018 JV59_23285 b19356a5645e6eeb33b44310cd48a840 114 Pfam PF00893 Small Multidrug Resistance protein 8 98 3.6E-23 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 JV59_23285 b19356a5645e6eeb33b44310cd48a840 114 Gene3D G3DSA:1.10.3730.20 7 114 5.5E-31 T 14-10-2018 JV59_21840 577c08b9c0828a1ecaea1592d5207ab0 60 Pfam PF04964 Flp/Fap pilin component 7 48 1.7E-9 T 14-10-2018 IPR007047 Flp/Fap pilin component JV59_17030 862d8aef7bcba4ebc097dd38e3c7760d 396 Pfam PF10082 Putative beta-barrel porin 2 40 392 1.6E-31 T 14-10-2018 IPR018759 Putative beta-barrel porin 2 JV59_25015 670037328a643d59d2f3df7c3e2dca05 152 Pfam PF04982 HPP family 34 145 2.1E-34 T 14-10-2018 IPR007065 HPP JV59_24855 764142009988c795e5ba3bdc4142d346 206 Pfam PF01965 DJ-1/PfpI family 4 171 1.5E-21 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 JV59_24855 764142009988c795e5ba3bdc4142d346 206 SUPERFAMILY SSF52317 5 174 4.37E-26 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_24855 764142009988c795e5ba3bdc4142d346 206 Gene3D G3DSA:3.40.50.880 1 205 8.6E-41 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like JV59_28875 564295cfdede451a8b3438732cc8f3b4 182 Pfam PF16036 Chalcone isomerase-like 45 180 3.2E-8 T 14-10-2018 IPR016087 Chalcone isomerase GO:0016872 JV59_33805 a76eef6d01fda0e2b5450af8714f7cf1 512 Pfam PF04293 SpoVR like protein 19 449 6.3E-177 T 14-10-2018 IPR007390 Sporulation stage V, protein R JV59_29280 bb9b8eff1b3b08275db0a6e29f954a45 441 Pfam PF12358 Protein of unknown function (DUF3644) 131 192 1.9E-11 T 14-10-2018 IPR022104 Protein of unknown function DUF3644 JV59_22360 f5080d6f1267e19b13b32057415435da 320 SUPERFAMILY SSF54427 190 301 7.13E-7 T 14-10-2018 IPR032710 NTF2-like domain superfamily JV59_22360 f5080d6f1267e19b13b32057415435da 320 SUPERFAMILY SSF52218 1 209 9.92E-48 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_22360 f5080d6f1267e19b13b32057415435da 320 Gene3D G3DSA:3.40.50.360 1 185 5.4E-52 T 14-10-2018 IPR029039 Flavoprotein-like superfamily JV59_22360 f5080d6f1267e19b13b32057415435da 320 Pfam PF02525 Flavodoxin-like fold 3 173 2.7E-40 T 14-10-2018 IPR003680 Flavodoxin-like fold JV59_31255 0bd60244d60edad8ecbc7bb326022c24 283 Gene3D G3DSA:3.60.15.10 26 278 1.9E-51 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JV59_31255 0bd60244d60edad8ecbc7bb326022c24 283 SUPERFAMILY SSF56281 18 213 2.36E-36 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JV59_31255 0bd60244d60edad8ecbc7bb326022c24 283 SMART SM00849 48 231 6.9E-19 T 14-10-2018 IPR001279 Metallo-beta-lactamase JV59_31255 0bd60244d60edad8ecbc7bb326022c24 283 Pfam PF00753 Metallo-beta-lactamase superfamily 49 177 1.3E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase JV59_37400 14360c75bd975e87c402cec53503ddb3 130 Pfam PF09834 Predicted membrane protein (DUF2061) 66 116 2.5E-22 T 14-10-2018 IPR018638 Domain of unknown function DUF2061, membrane JV59_37400 14360c75bd975e87c402cec53503ddb3 130 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 7.2E-23 T 14-10-2018 IPR018638 Domain of unknown function DUF2061, membrane JV59_17355 21afff18cf064be53532842f3f8ec1ea 417 SUPERFAMILY SSF51261 135 378 1.99E-64 T 14-10-2018 IPR011055 Duplicated hybrid motif JV59_17355 21afff18cf064be53532842f3f8ec1ea 417 Gene3D G3DSA:3.10.450.350 52 145 2.1E-29 T 14-10-2018 JV59_17355 21afff18cf064be53532842f3f8ec1ea 417 Pfam PF01551 Peptidase family M23 282 376 7.7E-31 T 14-10-2018 IPR016047 Peptidase M23 JV59_17355 21afff18cf064be53532842f3f8ec1ea 417 Gene3D G3DSA:3.10.450.350 146 250 7.6E-36 T 14-10-2018 JV59_17355 21afff18cf064be53532842f3f8ec1ea 417 Gene3D G3DSA:2.70.70.10 251 382 6.2E-53 T 14-10-2018 IPR011055 Duplicated hybrid motif JV59_16285 ca9edb6db5cf6404f876439f793cf7a1 463 Pfam PF02321 Outer membrane efflux protein 48 230 2.2E-9 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 JV59_16285 ca9edb6db5cf6404f876439f793cf7a1 463 Pfam PF02321 Outer membrane efflux protein 268 445 1.2E-13 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 JV59_16285 ca9edb6db5cf6404f876439f793cf7a1 463 Gene3D G3DSA:1.20.1600.10 39 447 1.7E-39 T 14-10-2018 JV59_16285 ca9edb6db5cf6404f876439f793cf7a1 463 SUPERFAMILY SSF56954 17 447 4.45E-50 T 14-10-2018 JV59_01150 58493090a4889f85415ec4e120ed91ba 584 SUPERFAMILY SSF69593 52 198 7.72E-5 T 14-10-2018 JV59_01150 58493090a4889f85415ec4e120ed91ba 584 Pfam PF13444 Acetyltransferase (GNAT) domain 331 432 9.4E-22 T 14-10-2018 JV59_01150 58493090a4889f85415ec4e120ed91ba 584 Pfam PF01553 Acyltransferase 66 194 8.9E-5 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JV59_01150 58493090a4889f85415ec4e120ed91ba 584 SUPERFAMILY SSF55729 315 486 3.71E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_01150 58493090a4889f85415ec4e120ed91ba 584 Gene3D G3DSA:3.40.630.30 314 457 4.5E-7 T 14-10-2018 JV59_01150 58493090a4889f85415ec4e120ed91ba 584 SMART SM00563 75 199 1.7E-6 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JV59_19805 605f577b4798cb99bbb2a94297567cfc 410 Gene3D G3DSA:1.20.1250.20 3 402 1.1E-57 T 14-10-2018 JV59_19805 605f577b4798cb99bbb2a94297567cfc 410 SUPERFAMILY SSF103473 9 398 4.32E-56 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_19805 605f577b4798cb99bbb2a94297567cfc 410 Pfam PF07690 Major Facilitator Superfamily 15 304 1.1E-29 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_32495 4826548346f0a5a8e6c6b2766f2f7c88 247 Pfam PF07070 SpoOM protein 2 215 3.0E-63 T 14-10-2018 IPR009776 Sporulation stage 0, protein M JV59_19535 aa9f7c85d69f3b3e24a8572956069410 296 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 32 288 1.3E-9 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase JV59_19535 aa9f7c85d69f3b3e24a8572956069410 296 Gene3D G3DSA:3.60.10.10 21 296 1.5E-26 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JV59_19535 aa9f7c85d69f3b3e24a8572956069410 296 SUPERFAMILY SSF56219 25 295 8.77E-27 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JV59_24085 2afc8fc703b7062ee0a18653f3c85ad1 232 SUPERFAMILY SSF53720 10 177 1.7E-9 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JV59_24085 2afc8fc703b7062ee0a18653f3c85ad1 232 Gene3D G3DSA:3.40.605.10 4 186 1.4E-8 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JV59_34940 23a1f4ee38394b026f84b140c0012527 164 Pfam PF10975 Protein of unknown function (DUF2802) 68 135 2.3E-23 T 14-10-2018 IPR021244 Protein of unknown function DUF2802 JV59_23715 a6501ac94b0cead5b86653eabbc3a09a 155 Pfam PF07670 Nucleoside recognition 31 124 4.7E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 JV59_27215 ba7a3985cdef7076a60d9ae164c8c4d7 181 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 163 3.1E-30 T 14-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 JV59_27215 ba7a3985cdef7076a60d9ae164c8c4d7 181 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 162 3.2E-24 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 JV59_27215 ba7a3985cdef7076a60d9ae164c8c4d7 181 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 121 145 - T 14-10-2018 IPR020935 Phosphodiesterase YfcE, conserved site JV59_27215 ba7a3985cdef7076a60d9ae164c8c4d7 181 SUPERFAMILY SSF56300 1 162 1.75E-37 T 14-10-2018 JV59_27215 ba7a3985cdef7076a60d9ae164c8c4d7 181 Gene3D G3DSA:3.60.21.10 1 181 3.2E-62 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like JV59_20525 f1fe51410350dd5dac62175d7730d088 308 Gene3D G3DSA:1.10.3720.10 68 308 7.1E-36 T 14-10-2018 IPR035906 MetI-like superfamily JV59_20525 f1fe51410350dd5dac62175d7730d088 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 304 1.6E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_20525 f1fe51410350dd5dac62175d7730d088 308 SUPERFAMILY SSF161098 24 301 8.88E-35 T 14-10-2018 IPR035906 MetI-like superfamily JV59_20525 f1fe51410350dd5dac62175d7730d088 308 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 14 306 4.8E-86 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 JV59_31195 8ebaa307c87f4ea8c57a8ea26c8108ee 62 Pfam PF08988 Type III secretion system, cytoplasmic E component of needle 4 61 2.1E-6 T 14-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 JV59_16825 df6045315de649a3f9a5cbc7b2fe04ed 434 TIGRFAM TIGR00797 matE: MATE efflux family protein 14 408 9.3E-65 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_16825 df6045315de649a3f9a5cbc7b2fe04ed 434 Pfam PF01554 MatE 14 175 1.2E-16 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_16825 df6045315de649a3f9a5cbc7b2fe04ed 434 Pfam PF01554 MatE 244 395 2.6E-14 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_21265 008c4e8f07a9c5f179b795c04721c578 202 Pfam PF01810 LysE type translocator 13 189 1.0E-16 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_20195 ba1f8c85b9adbe0f9f1378ce78a4490c 484 Pfam PF03929 PepSY-associated TM region 31 423 2.3E-63 T 14-10-2018 IPR005625 PepSY-associated TM protein JV59_23130 30fb10fc03e298c161d300a0960488dc 656 Pfam PF11826 Protein of unknown function (DUF3346) 290 514 6.8E-140 T 14-10-2018 IPR021781 Protein of unknown function DUF3346 JV59_00060 e46346a105aef3d9323f9b48a4437f92 305 Gene3D G3DSA:3.30.420.40 2 116 6.3E-8 T 14-10-2018 JV59_00060 e46346a105aef3d9323f9b48a4437f92 305 Pfam PF11104 Type IV pilus assembly protein PilM; 8 177 3.9E-21 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM JV59_17750 e091d55c2e68300bda606962758252ae 240 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 109 125 - T 14-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 JV59_17750 e091d55c2e68300bda606962758252ae 240 SMART SM01057 23 240 2.3E-89 T 14-10-2018 IPR001148 Alpha carbonic anhydrase domain JV59_17750 e091d55c2e68300bda606962758252ae 240 SUPERFAMILY SSF51069 22 237 3.27E-70 T 14-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily JV59_17750 e091d55c2e68300bda606962758252ae 240 Gene3D G3DSA:3.10.200.10 22 238 1.1E-78 T 14-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily JV59_17750 e091d55c2e68300bda606962758252ae 240 Pfam PF00194 Eukaryotic-type carbonic anhydrase 22 238 2.8E-45 T 14-10-2018 IPR001148 Alpha carbonic anhydrase domain JV59_33370 23cd05b7e820114050edae64c00d8784 99 Pfam PF11747 Killing trait 11 78 2.7E-30 T 14-10-2018 IPR021070 Killing trait, RebB JV59_01775 517a26175ad2e213dfd5cdb6e855e158 437 Pfam PF05525 Branched-chain amino acid transport protein 8 426 6.7E-152 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 JV59_01775 517a26175ad2e213dfd5cdb6e855e158 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 413 7.0E-136 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 JV59_03220 5b669f98898404ed99d09abc08c77ecd 269 Pfam PF13371 Tetratricopeptide repeat 187 259 2.0E-24 T 14-10-2018 JV59_03220 5b669f98898404ed99d09abc08c77ecd 269 SUPERFAMILY SSF48452 190 253 3.21E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_03220 5b669f98898404ed99d09abc08c77ecd 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 1.0E-45 T 14-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 JV59_03220 5b669f98898404ed99d09abc08c77ecd 269 Gene3D G3DSA:1.25.40.10 172 266 5.1E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JV59_32160 180a69c16553723998a7a357edb38079 203 SMART SM00903 19 170 1.9E-8 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 JV59_32160 180a69c16553723998a7a357edb38079 203 Gene3D G3DSA:2.30.110.10 1 203 2.4E-62 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JV59_32160 180a69c16553723998a7a357edb38079 203 SUPERFAMILY SSF50475 2 198 3.04E-37 T 14-10-2018 JV59_32160 180a69c16553723998a7a357edb38079 203 Pfam PF01613 Flavin reductase like domain 22 162 8.2E-18 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 JV59_31610 b7af7e669d03aaf2d145a5ae5343b884 405 Pfam PF08668 HDOD domain 177 275 6.0E-7 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD JV59_31610 b7af7e669d03aaf2d145a5ae5343b884 405 SUPERFAMILY SSF109604 135 275 6.91E-8 T 14-10-2018 JV59_31610 b7af7e669d03aaf2d145a5ae5343b884 405 Gene3D G3DSA:1.10.3210.10 130 292 6.4E-8 T 14-10-2018 JV59_29895 bb962d669ef8366202a5b09bd3031ac5 129 Pfam PF12614 Ribosome recycling factor 4 127 4.6E-40 T 14-10-2018 IPR022253 Ribosome recycling factor. bacterial JV59_20980 864b6d672c7e232ef1b72bbd6f113b93 198 SUPERFAMILY SSF47413 12 70 8.45E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_20980 864b6d672c7e232ef1b72bbd6f113b93 198 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 24 66 5.8E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_20980 864b6d672c7e232ef1b72bbd6f113b93 198 Gene3D G3DSA:1.10.260.40 13 70 6.2E-8 T 14-10-2018 JV59_16670 50be43e58aebdb79017156d7c5a5ab5d 70 Pfam PF03889 Domain of unknown function 24 61 1.2E-20 T 14-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 JV59_26935 1616a81a156add9e210154f4f753e05f 285 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 67 271 1.9E-7 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase JV59_26935 1616a81a156add9e210154f4f753e05f 285 Gene3D G3DSA:3.60.10.10 61 283 2.7E-19 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JV59_26935 1616a81a156add9e210154f4f753e05f 285 SUPERFAMILY SSF56219 63 278 8.51E-25 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JV59_26935 1616a81a156add9e210154f4f753e05f 285 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 279 52.395 T 14-10-2018 IPR022958 Uncharacterised protein family UPF0294 JV59_20685 e90fe6f79e4ec2faaaea569933994e75 160 Pfam PF11158 Protein of unknown function (DUF2938) 11 158 6.3E-55 T 14-10-2018 IPR021329 Protein of unknown function DUF2938 JV59_22970 9c78ea859b5f169d071eff21c7c75fbe 145 Pfam PF03928 Haem-degrading 4 133 1.1E-22 T 14-10-2018 IPR005624 Haem-degrading JV59_22970 9c78ea859b5f169d071eff21c7c75fbe 145 SUPERFAMILY SSF143744 2 135 1.14E-30 T 14-10-2018 IPR038084 GlcG-like domain superfamily JV59_22970 9c78ea859b5f169d071eff21c7c75fbe 145 Gene3D G3DSA:3.30.450.150 1 137 7.4E-31 T 14-10-2018 IPR038084 GlcG-like domain superfamily JV59_22460 dfc9b2054d0f5d1ab4f7b6b120545080 118 Gene3D G3DSA:3.30.1370.150 59 118 1.4E-31 T 14-10-2018 JV59_22460 dfc9b2054d0f5d1ab4f7b6b120545080 118 Pfam PF10928 Protein of unknown function (DUF2810) 65 116 2.5E-32 T 14-10-2018 IPR021230 Protein of unknown function DUF2810 JV59_23765 5b9ea53f0a1af53ce3cb093c5c56bad2 86 Pfam PF11747 Killing trait 7 72 3.9E-29 T 14-10-2018 IPR021070 Killing trait, RebB JV59_16495 77b14361b6abcc24e059ee1b5e09e175 442 Gene3D G3DSA:3.40.50.12780 46 344 3.0E-62 T 14-10-2018 JV59_16495 77b14361b6abcc24e059ee1b5e09e175 442 Pfam PF00501 AMP-binding enzyme 112 270 4.8E-6 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JV59_16495 77b14361b6abcc24e059ee1b5e09e175 442 SUPERFAMILY SSF56801 104 434 6.15E-19 T 14-10-2018 JV59_39020 40dd2d01849a61b087ac8763966c1a15 183 SUPERFAMILY SSF51161 5 175 6.93E-45 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily JV59_39020 40dd2d01849a61b087ac8763966c1a15 183 Gene3D G3DSA:2.160.10.10 3 181 5.1E-56 T 14-10-2018 JV59_39020 40dd2d01849a61b087ac8763966c1a15 183 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 96 129 1.4E-6 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_39020 40dd2d01849a61b087ac8763966c1a15 183 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 40 2.3E-5 T 14-10-2018 IPR001451 Hexapeptide repeat JV59_40075 25abf172cc4f05bdfb9fe96c6ae3f45c 325 Gene3D G3DSA:3.20.20.140 27 324 6.8E-31 T 14-10-2018 JV59_40075 25abf172cc4f05bdfb9fe96c6ae3f45c 325 Pfam PF04909 Amidohydrolase 150 322 5.3E-7 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JV59_40075 25abf172cc4f05bdfb9fe96c6ae3f45c 325 SUPERFAMILY SSF51556 27 321 1.51E-20 T 14-10-2018 IPR032466 Metal-dependent hydrolase JV59_21200 198d26d742b9f73991c7cef554ac8f89 158 PIRSF PIRSF019239 1 158 1.1E-39 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 JV59_21200 198d26d742b9f73991c7cef554ac8f89 158 Pfam PF01899 Na+/H+ ion antiporter subunit 7 155 4.9E-39 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 JV59_33790 d2b9c80b6111dc28b1d7fc91d8904f77 255 Pfam PF06629 MltA-interacting protein MipA 29 255 8.1E-40 T 14-10-2018 IPR010583 MltA-interacting MipA JV59_32895 e80ac5634fcd4fd83121bba6d7dd37dc 112 PIRSF PIRSF028139 2 112 4.3E-38 T 14-10-2018 IPR014980 Dopa 4,5-dioxygenase JV59_32895 e80ac5634fcd4fd83121bba6d7dd37dc 112 Gene3D G3DSA:3.30.70.1240 4 112 1.5E-39 T 14-10-2018 IPR023389 DOPA-like superfamily JV59_32895 e80ac5634fcd4fd83121bba6d7dd37dc 112 Pfam PF08883 Dopa 4,5-dioxygenase family 11 110 4.3E-33 T 14-10-2018 IPR014980 Dopa 4,5-dioxygenase JV59_32895 e80ac5634fcd4fd83121bba6d7dd37dc 112 SUPERFAMILY SSF143410 4 112 4.18E-40 T 14-10-2018 IPR023389 DOPA-like superfamily JV59_22400 90fc74ff655f028dc560250422ea25f5 452 Pfam PF08811 Protein of unknown function (DUF1800) 13 450 1.7E-111 T 14-10-2018 IPR014917 Protein of unknown function DUF1800 JV59_29810 4a8348e8c7e0a42adc31c976ec474f39 329 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 17 323 1.5E-72 T 14-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 JV59_29810 4a8348e8c7e0a42adc31c976ec474f39 329 SUPERFAMILY SSF51556 4 325 1.93E-80 T 14-10-2018 IPR032466 Metal-dependent hydrolase JV59_29810 4a8348e8c7e0a42adc31c976ec474f39 329 Gene3D G3DSA:3.20.20.140 1 326 9.5E-91 T 14-10-2018 JV59_31945 9c9fa63a34ec76e23cb364ab984f79b2 333 Pfam PF04392 ABC transporter substrate binding protein 36 320 4.3E-32 T 14-10-2018 IPR007487 ABC transporter, substrate-binding protein JV59_31945 9c9fa63a34ec76e23cb364ab984f79b2 333 Gene3D G3DSA:3.40.50.2300 141 321 7.2E-44 T 14-10-2018 JV59_31945 9c9fa63a34ec76e23cb364ab984f79b2 333 Gene3D G3DSA:3.40.50.2300 41 298 7.2E-44 T 14-10-2018 JV59_28915 e5b7a468b67ff5703c151c9cc3a8dd32 533 Pfam PF03553 Na+/H+ antiporter family 165 497 2.4E-105 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 JV59_26510 4c1c64ff615724f2092032817d7c883a 156 Pfam PF12821 Threonine/Serine exporter, ThrE 12 146 8.3E-37 T 14-10-2018 IPR024528 Threonine/Serine exporter, ThrE JV59_22000 5820c725e41ea125ff590ac4e690d453 401 SUPERFAMILY SSF103473 8 390 8.89E-31 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_22000 5820c725e41ea125ff590ac4e690d453 401 Gene3D G3DSA:1.20.1250.20 2 394 3.4E-27 T 14-10-2018 JV59_22000 5820c725e41ea125ff590ac4e690d453 401 Pfam PF07690 Major Facilitator Superfamily 15 359 9.3E-23 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_34945 a47a69f87115fa64aa384a982110a3e4 164 Gene3D G3DSA:2.30.30.40 22 147 5.9E-43 T 14-10-2018 JV59_34945 a47a69f87115fa64aa384a982110a3e4 164 Gene3D G3DSA:2.40.50.180 39 148 5.9E-43 T 14-10-2018 JV59_34945 a47a69f87115fa64aa384a982110a3e4 164 SUPERFAMILY SSF50341 14 158 7.32E-42 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 JV59_34945 a47a69f87115fa64aa384a982110a3e4 164 Pfam PF01584 CheW-like domain 20 156 3.7E-40 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JV59_34945 a47a69f87115fa64aa384a982110a3e4 164 SMART SM00260 16 153 1.7E-49 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 JV59_32840 cc438062ff1bcb74f5c31a917d87adcf 376 Pfam PF13289 SIR2-like domain 179 329 7.1E-6 T 14-10-2018 IPR039444 SIR2-like domain JV59_17385 ed16b72905dc9da4dd3827688c5ae469 138 Pfam PF02472 Biopolymer transport protein ExbD/TolR 16 134 1.1E-21 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 JV59_30170 648a5aa03dc013c5b784efa3c495113d 447 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 444 2.5E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_30170 648a5aa03dc013c5b784efa3c495113d 447 SMART SM00387 338 447 7.1E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JV59_30170 648a5aa03dc013c5b784efa3c495113d 447 Gene3D G3DSA:1.10.287.130 189 290 7.3E-8 T 14-10-2018 JV59_30170 648a5aa03dc013c5b784efa3c495113d 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 4.7E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_30170 648a5aa03dc013c5b784efa3c495113d 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 4.7E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JV59_30170 648a5aa03dc013c5b784efa3c495113d 447 Gene3D G3DSA:3.30.565.10 305 447 9.3E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_30170 648a5aa03dc013c5b784efa3c495113d 447 SUPERFAMILY SSF55874 306 442 4.19E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JV59_33635 bf61f459b32c4fd5b9c46268b0032976 301 Pfam PF03956 Lysine exporter LysO 112 297 2.4E-53 T 14-10-2018 IPR005642 Lysine exporter LysO JV59_33635 bf61f459b32c4fd5b9c46268b0032976 301 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 134 299 4.0E-79 T 14-10-2018 IPR005642 Lysine exporter LysO JV59_23350 a4a032b4488aa591b6df5d5357ce768b 625 SUPERFAMILY SSF63829 286 592 2.09E-15 T 14-10-2018 JV59_23350 a4a032b4488aa591b6df5d5357ce768b 625 Pfam PF05787 Bacterial protein of unknown function (DUF839) 56 592 4.3E-199 T 14-10-2018 IPR008557 Protein of unknown function DUF839 JV59_32015 ee06cacbb61df49f07ca18cabdfaf93c 386 Pfam PF12698 ABC-2 family transporter protein 17 350 5.7E-45 T 14-10-2018 JV59_32070 24434aed205dd6ad6d0267e7249391eb 76 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 JV59_32070 24434aed205dd6ad6d0267e7249391eb 76 Gene3D G3DSA:3.40.30.10 3 76 1.7E-14 T 14-10-2018 JV59_32070 24434aed205dd6ad6d0267e7249391eb 76 SUPERFAMILY SSF52833 3 70 8.6E-13 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_32070 24434aed205dd6ad6d0267e7249391eb 76 Pfam PF00462 Glutaredoxin 5 60 3.6E-10 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 JV59_23330 73c11de878debfdb47cbf5d53db97136 201 Gene3D G3DSA:3.40.50.150 28 196 9.3E-20 T 14-10-2018 JV59_23330 73c11de878debfdb47cbf5d53db97136 201 Pfam PF13649 Methyltransferase domain 39 129 5.6E-10 T 14-10-2018 JV59_23330 73c11de878debfdb47cbf5d53db97136 201 SUPERFAMILY SSF53335 3 179 6.6E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JV59_29365 de781fa6c4f95fce86b325e5f515e24e 101 Gene3D G3DSA:3.30.70.100 6 95 1.4E-6 T 14-10-2018 JV59_29365 de781fa6c4f95fce86b325e5f515e24e 101 Pfam PF07978 NIPSNAP 5 99 1.7E-24 T 14-10-2018 IPR012577 NIPSNAP JV59_29365 de781fa6c4f95fce86b325e5f515e24e 101 SUPERFAMILY SSF54909 1 99 2.15E-20 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_35085 dcc3d5ae23eff9e477ec845599156726 1868 Gene3D G3DSA:1.20.58.2200 1806 1865 1.6E-14 T 14-10-2018 IPR038440 FimV, C-terminal domain superfamily JV59_35085 dcc3d5ae23eff9e477ec845599156726 1868 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1823 1864 8.6E-15 T 14-10-2018 IPR020011 Motility protein FimV, C-terminal JV59_35085 dcc3d5ae23eff9e477ec845599156726 1868 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 67 139 1.9E-27 T 14-10-2018 IPR020012 Motility protein FimV, N-terminal JV59_21350 bbf01572d3643ef247f5e641ee679d82 106 Gene3D G3DSA:3.10.20.440 4 101 3.2E-18 T 14-10-2018 JV59_21350 bbf01572d3643ef247f5e641ee679d82 106 SUPERFAMILY SSF54292 20 98 2.36E-19 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JV59_21350 bbf01572d3643ef247f5e641ee679d82 106 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 17 95 1.5E-22 T 14-10-2018 JV59_36805 6694ddd9293483f95e3d6f8595d40dc6 153 SUPERFAMILY SSF56925 41 153 3.22E-5 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JV59_36805 6694ddd9293483f95e3d6f8595d40dc6 153 Gene3D G3DSA:2.40.160.10 23 153 7.0E-6 T 14-10-2018 IPR023614 Porin domain superfamily JV59_36805 6694ddd9293483f95e3d6f8595d40dc6 153 PIRSF PIRSF028680 1 153 1.0E-62 T 14-10-2018 IPR016895 Uncharacterised conserved protein UCP028680 JV59_34640 18b520c204f6bcf82050cf8df08fee9a 488 Pfam PF00990 Diguanylate cyclase, GGDEF domain 334 485 2.0E-37 T 14-10-2018 IPR000160 GGDEF domain JV59_34640 18b520c204f6bcf82050cf8df08fee9a 488 Gene3D G3DSA:3.30.70.270 323 488 7.3E-44 T 14-10-2018 JV59_34640 18b520c204f6bcf82050cf8df08fee9a 488 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 333 487 9.8E-42 T 14-10-2018 IPR000160 GGDEF domain JV59_34640 18b520c204f6bcf82050cf8df08fee9a 488 SUPERFAMILY SSF55073 339 488 2.67E-36 T 14-10-2018 IPR029787 Nucleotide cyclase JV59_34640 18b520c204f6bcf82050cf8df08fee9a 488 SMART SM00267 323 488 2.7E-40 T 14-10-2018 IPR000160 GGDEF domain JV59_20225 817adadc99e3537374a2ac937d5c02a7 127 Gene3D G3DSA:1.20.120.10 17 124 1.4E-9 T 14-10-2018 JV59_20225 817adadc99e3537374a2ac937d5c02a7 127 Pfam PF07361 Cytochrome b562 22 117 8.8E-26 T 14-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 JV59_20225 817adadc99e3537374a2ac937d5c02a7 127 SUPERFAMILY SSF47175 22 117 5.65E-24 T 14-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 JV59_36690 d47b84431165564208c0a22f93d83140 381 Pfam PF02690 Na+/Pi-cotransporter 217 325 2.5E-19 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 JV59_36690 d47b84431165564208c0a22f93d83140 381 Pfam PF02690 Na+/Pi-cotransporter 29 149 9.6E-23 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 JV59_22860 bc82c5e784d860266789a6696b57398b 185 Pfam PF04955 HupE / UreJ protein 11 169 3.3E-22 T 14-10-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein JV59_17545 8aa29e16b983762aac0c340637453745 220 Gene3D G3DSA:2.30.110.10 2 218 1.7E-58 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JV59_17545 8aa29e16b983762aac0c340637453745 220 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 23 162 1.1E-37 T 14-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related JV59_17545 8aa29e16b983762aac0c340637453745 220 SUPERFAMILY SSF50475 2 184 2.75E-51 T 14-10-2018 JV59_19505 8161e09717788caabcee02355d307db8 157 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 25 59 3.1E-9 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 JV59_19505 8161e09717788caabcee02355d307db8 157 SUPERFAMILY SSF54534 19 156 3.93E-49 T 14-10-2018 JV59_19505 8161e09717788caabcee02355d307db8 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 66 154 7.0E-27 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain JV59_19505 8161e09717788caabcee02355d307db8 157 Gene3D G3DSA:3.10.50.40 21 157 1.1E-50 T 14-10-2018 JV59_39025 7d1b94ce58327faf3e3d71b2b98769a2 88 SUPERFAMILY SSF160272 1 86 5.89E-31 T 14-10-2018 IPR036692 Shew3726-like superfamily JV59_39025 7d1b94ce58327faf3e3d71b2b98769a2 88 Gene3D G3DSA:3.30.160.140 1 88 1.3E-32 T 14-10-2018 IPR036692 Shew3726-like superfamily JV59_39025 7d1b94ce58327faf3e3d71b2b98769a2 88 Pfam PF07369 Protein of unknown function (DUF1488) 5 85 2.2E-24 T 14-10-2018 IPR009962 Protein of unknown function DUF1488 JV59_30380 3b7dfb94d105b4973e7460d762b6f96e 254 PIRSF PIRSF028069 1 254 7.7E-106 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 JV59_30380 3b7dfb94d105b4973e7460d762b6f96e 254 Pfam PF11932 Protein of unknown function (DUF3450) 8 247 8.8E-88 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 JV59_00030 a594469d5b77fd68de2b84ea2e6e02aa 84 Pfam PF12292 Protein of unknown function (DUF3624) 1 80 3.8E-36 T 14-10-2018 IPR022072 Protein of unknown function DUF3624 JV59_25815 874cbaa328fa44dcad247c56879219f2 345 SUPERFAMILY SSF51905 14 312 2.43E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_01375 eb4e7c76e9842ffbb9c29dd27ac79efe 264 Pfam PF01578 Cytochrome C assembly protein 38 262 1.3E-44 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 JV59_32760 7920175910f8cbccb959f18558952f31 269 Pfam PF01925 Sulfite exporter TauE/SafE 12 266 3.3E-49 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 JV59_18030 da6f429ed4a8ef6739c7a1a8a0922b77 491 Pfam PF07690 Major Facilitator Superfamily 10 423 5.2E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_18030 da6f429ed4a8ef6739c7a1a8a0922b77 491 SUPERFAMILY SSF103473 8 476 2.88E-18 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_18030 da6f429ed4a8ef6739c7a1a8a0922b77 491 Gene3D G3DSA:1.20.1250.20 8 475 2.1E-61 T 14-10-2018 JV59_30545 6e49708c12d413a1371a03dfe183215f 258 Pfam PF06629 MltA-interacting protein MipA 43 258 1.2E-41 T 14-10-2018 IPR010583 MltA-interacting MipA JV59_29575 02614758e1155bac650625d76f30577f 247 Pfam PF01925 Sulfite exporter TauE/SafE 12 240 7.1E-30 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 JV59_19545 cdf7a9c8bce28d8631d4311768ce3a82 136 Pfam PF04143 Sulphur transport 12 127 1.1E-8 T 14-10-2018 IPR007272 Sulphur transport domain JV59_38630 11d3370075872c81cf05c6ca4db2bb47 261 SUPERFAMILY SSF53448 3 139 3.1E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_38630 11d3370075872c81cf05c6ca4db2bb47 261 Pfam PF00535 Glycosyl transferase family 2 8 111 4.6E-15 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 JV59_38630 11d3370075872c81cf05c6ca4db2bb47 261 Gene3D G3DSA:3.90.550.10 1 167 4.3E-21 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_21195 18c6cb67d8aa801593f8b269129b61b8 517 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 163 187 2.6E-16 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_21195 18c6cb67d8aa801593f8b269129b61b8 517 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 374 400 2.6E-16 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_21195 18c6cb67d8aa801593f8b269129b61b8 517 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 2.6E-16 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_21195 18c6cb67d8aa801593f8b269129b61b8 517 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 133 152 2.6E-16 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_21195 18c6cb67d8aa801593f8b269129b61b8 517 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 322 341 2.6E-16 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_21195 18c6cb67d8aa801593f8b269129b61b8 517 Pfam PF00361 Proton-conducting membrane transporter 129 410 5.8E-61 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JV59_34970 cba40112feed5a83e5b02f049e98cca3 239 SUPERFAMILY SSF75708 26 238 3.66E-67 T 14-10-2018 JV59_34970 cba40112feed5a83e5b02f049e98cca3 239 Pfam PF04344 Chemotaxis phosphatase, CheZ 37 239 2.8E-78 T 14-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 JV59_34970 cba40112feed5a83e5b02f049e98cca3 239 PIRSF PIRSF002884 13 239 3.1E-92 T 14-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 JV59_34970 cba40112feed5a83e5b02f049e98cca3 239 Gene3D G3DSA:1.10.287.500 55 189 1.1E-47 T 14-10-2018 JV59_27855 69493ca28ec75ee099b6e4102b5970ca 322 Pfam PF01551 Peptidase family M23 168 263 1.1E-28 T 14-10-2018 IPR016047 Peptidase M23 JV59_27855 69493ca28ec75ee099b6e4102b5970ca 322 Gene3D G3DSA:2.70.70.10 144 267 3.1E-42 T 14-10-2018 IPR011055 Duplicated hybrid motif JV59_27855 69493ca28ec75ee099b6e4102b5970ca 322 SUPERFAMILY SSF51261 80 266 4.19E-52 T 14-10-2018 IPR011055 Duplicated hybrid motif JV59_18740 f5f3fe420dfee61920c08e703fcdc7c5 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 66 8.1E-9 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain JV59_18740 f5f3fe420dfee61920c08e703fcdc7c5 96 Gene3D G3DSA:3.30.70.100 1 93 3.0E-23 T 14-10-2018 JV59_18740 f5f3fe420dfee61920c08e703fcdc7c5 96 SUPERFAMILY SSF54909 1 90 5.37E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel JV59_39820 f372505b6c4866a69c20c5d3547ad6ff 151 Pfam PF07681 DoxX 27 108 1.5E-18 T 14-10-2018 IPR032808 DoxX family JV59_22925 ffc92d2b4f42ebc650e1b86c17856d3f 198 Pfam PF01810 LysE type translocator 12 189 3.3E-9 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_22875 d9c7cde93a1207ba0120aa4d6e8c6276 112 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 12 112 2.8E-44 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JV59_22875 d9c7cde93a1207ba0120aa4d6e8c6276 112 SUPERFAMILY SSF51278 12 112 1.29E-45 T 14-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JV59_22875 d9c7cde93a1207ba0120aa4d6e8c6276 112 Gene3D G3DSA:2.10.150.10 6 112 1.9E-45 T 14-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JV59_22875 d9c7cde93a1207ba0120aa4d6e8c6276 112 Hamap MF_01954 Urease subunit beta [ureB]. 11 111 30.497 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JV59_22875 d9c7cde93a1207ba0120aa4d6e8c6276 112 Pfam PF00699 Urease beta subunit 13 110 1.8E-43 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JV59_28980 6237545013613576d68e0178c071060f 261 Pfam PF11150 Protein of unknown function (DUF2927) 32 229 1.5E-62 T 14-10-2018 IPR021323 Protein of unknown function DUF2927 JV59_22610 99884a1b6f4467f053c3bdb9c5596d72 435 Pfam PF06181 Urate oxidase N-terminal 4 293 3.2E-127 T 14-10-2018 IPR010389 Urate oxidase N-terminal JV59_17390 2896e28d7b34fb5bfd134bdad0dbc9db 229 Pfam PF01618 MotA/TolQ/ExbB proton channel family 96 194 6.3E-22 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel JV59_23665 423d692245d680ddd34c61a1920e11fd 456 Pfam PF07394 Protein of unknown function (DUF1501) 43 439 7.2E-46 T 14-10-2018 IPR010869 Protein of unknown function DUF1501 JV59_25905 df45672f17226b783778281099790f92 239 Pfam PF04402 Protein of unknown function (DUF541) 41 217 1.1E-16 T 14-10-2018 IPR007497 Protein of unknown function DUF541 JV59_25905 df45672f17226b783778281099790f92 239 PIRSF PIRSF029033 1 239 5.4E-106 T 14-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein JV59_01515 80642c68260191181a3384bb18a79665 256 PIRSF PIRSF006648 7 253 4.2E-25 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 JV59_01515 80642c68260191181a3384bb18a79665 256 Pfam PF01061 ABC-2 type transporter 8 218 1.9E-39 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 JV59_01515 80642c68260191181a3384bb18a79665 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 3.4E-6 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 JV59_01515 80642c68260191181a3384bb18a79665 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 3.4E-6 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 JV59_01515 80642c68260191181a3384bb18a79665 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 3.4E-6 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 JV59_32655 caa8539dbde59ab6f5b8aa7e32c56c53 133 SUPERFAMILY SSF54913 1 65 1.91E-8 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta JV59_32655 caa8539dbde59ab6f5b8aa7e32c56c53 133 Pfam PF09413 Putative prokaryotic signal transducing protein 1 65 1.6E-11 T 14-10-2018 IPR018551 Domain of unknown function DUF2007 JV59_01240 f666a51b6070b752716e520538af5e94 373 Gene3D G3DSA:2.40.160.180 95 371 3.4E-10 T 14-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily JV59_25120 d4c7f9b25a30ab0931e3ba83c392ee41 241 Pfam PF13728 F plasmid transfer operon protein 21 230 1.2E-43 T 14-10-2018 IPR039555 F plasmid transfer operon protein JV59_30765 86f6a6585cb5a0d0909f82c672d5451c 114 Pfam PF12290 Protein of unknown function (DUF3802) 2 110 3.6E-43 T 14-10-2018 IPR020979 Uncharacterised protein family A0KLC6 JV59_25875 32024fe6ef97fdcf4a8dc43369499638 195 Gene3D G3DSA:2.40.160.20 4 195 3.8E-35 T 14-10-2018 JV59_25875 32024fe6ef97fdcf4a8dc43369499638 195 SUPERFAMILY SSF56925 21 195 1.67E-24 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JV59_25875 32024fe6ef97fdcf4a8dc43369499638 195 Pfam PF01389 OmpA-like transmembrane domain 21 195 2.3E-19 T 14-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 JV59_00915 d437adbe0b87e80ab48fec064fe1a5d7 269 Gene3D G3DSA:2.60.120.730 1 136 1.2E-10 T 14-10-2018 JV59_39795 95e3fd90aae150b896c8b885aa6f018f 399 Pfam PF00083 Sugar (and other) transporter 10 204 3.2E-17 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 JV59_39795 95e3fd90aae150b896c8b885aa6f018f 399 SUPERFAMILY SSF103473 5 387 7.32E-32 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_39795 95e3fd90aae150b896c8b885aa6f018f 399 Gene3D G3DSA:1.20.1250.20 8 395 3.0E-33 T 14-10-2018 JV59_19190 b806a50fdeee203ab1b7566d73c14b0c 109 SUPERFAMILY SSF47226 26 86 1.96E-5 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 JV59_19190 b806a50fdeee203ab1b7566d73c14b0c 109 Pfam PF01627 Hpt domain 33 92 1.7E-5 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 JV59_40190 0d0b2d7570168f245326755b0c5d09e8 215 SUPERFAMILY SSF46689 5 80 2.17E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JV59_40190 0d0b2d7570168f245326755b0c5d09e8 215 Gene3D G3DSA:1.10.10.60 4 55 2.8E-23 T 14-10-2018 JV59_40190 0d0b2d7570168f245326755b0c5d09e8 215 Gene3D G3DSA:1.10.357.10 56 212 2.9E-35 T 14-10-2018 JV59_40190 0d0b2d7570168f245326755b0c5d09e8 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 61 1.3E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JV59_40190 0d0b2d7570168f245326755b0c5d09e8 215 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JV59_30840 001990076940f5588c74bc78501b533c 272 SUPERFAMILY SSF53850 29 258 1.54E-31 T 14-10-2018 JV59_30840 001990076940f5588c74bc78501b533c 272 Pfam PF12849 PBP superfamily domain 31 247 1.7E-30 T 14-10-2018 IPR024370 PBP domain JV59_30840 001990076940f5588c74bc78501b533c 272 Gene3D G3DSA:3.40.190.10 31 255 2.1E-98 T 14-10-2018 JV59_30840 001990076940f5588c74bc78501b533c 272 Gene3D G3DSA:3.40.190.10 106 218 2.1E-98 T 14-10-2018 JV59_28285 069b28e306086fd99562048b92296dcb 95 Pfam PF07023 Protein of unknown function (DUF1315) 4 84 2.9E-29 T 14-10-2018 IPR009749 Protein of unknown function DUF1315 JV59_37290 4882f0affedf8492abe6a101053dd27d 367 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 344 5.0E-115 T 14-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 JV59_37290 4882f0affedf8492abe6a101053dd27d 367 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 343 9.4E-66 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 JV59_31305 aff8f6c531f683b6414659ab8d7ea2f3 192 Pfam PF13327 Type III secretion system subunit 10 165 2.6E-23 T 14-10-2018 IPR025292 Type III secretion system protein JV59_29285 fab0260ced7e407944eec3248d8605b4 502 Pfam PF11840 Protein of unknown function (DUF3360) 18 498 3.2E-269 T 14-10-2018 IPR021794 Protein of unknown function DUF3360 JV59_32030 090eed543cda776324ff891f4a287212 145 Pfam PF12975 Domain of unknown function (DUF3859) 5 131 2.1E-38 T 14-10-2018 IPR024331 Domain of unknown function DUF3859 JV59_16925 f9128fad1fa8be8ebe0c687082acddf2 102 Gene3D G3DSA:1.10.260.40 5 101 1.5E-24 T 14-10-2018 JV59_16925 f9128fad1fa8be8ebe0c687082acddf2 102 SMART SM00530 8 67 3.8E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_16925 f9128fad1fa8be8ebe0c687082acddf2 102 Pfam PF01381 Helix-turn-helix 9 67 1.5E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JV59_16925 f9128fad1fa8be8ebe0c687082acddf2 102 SUPERFAMILY SSF47413 4 72 1.18E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_35165 4089cef8e7c0b5c656ddbcc3e0a979fa 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 6.6E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 JV59_35165 4089cef8e7c0b5c656ddbcc3e0a979fa 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 6.6E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 JV59_35165 4089cef8e7c0b5c656ddbcc3e0a979fa 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 6.6E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 JV59_35165 4089cef8e7c0b5c656ddbcc3e0a979fa 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 6.6E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 JV59_35165 4089cef8e7c0b5c656ddbcc3e0a979fa 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 255 1.7E-73 T 14-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 JV59_35165 4089cef8e7c0b5c656ddbcc3e0a979fa 260 Pfam PF01311 Bacterial export proteins, family 1 13 243 3.8E-55 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 JV59_36815 27a904c55301ddf26c37116ab4505614 129 Pfam PF11697 Protein of unknown function (DUF3293) 30 99 5.8E-17 T 14-10-2018 IPR021710 Protein of unknown function DUF3293 JV59_20395 f5d46eafc3bf89a3186e13da9f95a9ac 559 SUPERFAMILY SSF55120 349 556 1.76E-59 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_20395 f5d46eafc3bf89a3186e13da9f95a9ac 559 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 403 417 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_20395 f5d46eafc3bf89a3186e13da9f95a9ac 559 Pfam PF00849 RNA pseudouridylate synthase 365 512 7.0E-32 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JV59_20395 f5d46eafc3bf89a3186e13da9f95a9ac 559 Gene3D G3DSA:3.30.2350.10 347 559 8.6E-65 T 14-10-2018 JV59_25175 061846d198832d8b5fb302c6d4fed336 188 Pfam PF05309 TraE protein 6 183 7.4E-32 T 14-10-2018 IPR007973 Pilus assembly TraE GO:0000746 JV59_25175 061846d198832d8b5fb302c6d4fed336 188 TIGRFAM TIGR02761 TraE_TIGR: type IV conjugative transfer system protein TraE 8 182 1.5E-38 T 14-10-2018 IPR007973 Pilus assembly TraE GO:0000746 JV59_33440 6bd5d358c5d39c433d0c6813235a3d1e 414 Gene3D G3DSA:3.50.50.60 4 323 3.9E-121 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_33440 6bd5d358c5d39c433d0c6813235a3d1e 414 Gene3D G3DSA:3.30.9.40 65 272 3.9E-121 T 14-10-2018 JV59_33440 6bd5d358c5d39c433d0c6813235a3d1e 414 SUPERFAMILY SSF51905 3 357 4.75E-17 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JV59_31895 a17ae557e6a4c3a5c5ee8ec3befe2bb0 467 Pfam PF06812 ImpA, N-terminal, type VI secretion system 8 154 4.4E-20 T 14-10-2018 IPR010657 ImpA, N-terminal JV59_16375 9c2b9d92c9c8e5db8faf5032120a0be0 249 Pfam PF02104 SURF1 family 26 228 8.0E-24 T 14-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_27650 68f8a2e60b7c84e196a1304824ec1c0c 93 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 90 2.8E-13 T 14-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 JV59_27650 68f8a2e60b7c84e196a1304824ec1c0c 93 SUPERFAMILY SSF101498 1 89 8.76E-8 T 14-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily JV59_34895 e69dfbd595b91b59bc3fc35ce57e874e 256 Pfam PF04333 MlaA lipoprotein 38 230 4.4E-63 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 JV59_34895 e69dfbd595b91b59bc3fc35ce57e874e 256 PRINTS PR01805 VacJ lipoprotein signature 40 53 2.9E-29 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 JV59_34895 e69dfbd595b91b59bc3fc35ce57e874e 256 PRINTS PR01805 VacJ lipoprotein signature 109 126 2.9E-29 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 JV59_34895 e69dfbd595b91b59bc3fc35ce57e874e 256 PRINTS PR01805 VacJ lipoprotein signature 146 163 2.9E-29 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 JV59_34895 e69dfbd595b91b59bc3fc35ce57e874e 256 PRINTS PR01805 VacJ lipoprotein signature 58 74 2.9E-29 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 JV59_38755 f4549d8683a1c704fdfb27a901513071 233 SUPERFAMILY SSF56925 91 232 1.41E-17 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JV59_38755 f4549d8683a1c704fdfb27a901513071 233 Gene3D G3DSA:2.40.160.90 104 233 1.2E-19 T 14-10-2018 JV59_19280 873a7dac9b47846a3a26483759625a08 455 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 57 441 6.9E-143 T 14-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 JV59_19280 873a7dac9b47846a3a26483759625a08 455 Pfam PF03606 C4-dicarboxylate anaerobic carrier 2 451 6.2E-129 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 JV59_20125 f7fb0ddb387e6fa8c3aca63ab59fc266 366 Pfam PF01553 Acyltransferase 92 240 3.6E-9 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JV59_20125 f7fb0ddb387e6fa8c3aca63ab59fc266 366 SUPERFAMILY SSF69593 88 244 3.4E-8 T 14-10-2018 JV59_28745 fa6044e779da7faee4a6aed772f70c48 333 Pfam PF00535 Glycosyl transferase family 2 17 179 4.6E-31 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 JV59_28745 fa6044e779da7faee4a6aed772f70c48 333 SUPERFAMILY SSF53448 15 223 6.19E-37 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_28745 fa6044e779da7faee4a6aed772f70c48 333 Gene3D G3DSA:3.90.550.10 7 196 2.5E-38 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JV59_22710 d670c4971c82a35fa3368bd0c830daef 485 Pfam PF13665 Domain of unknown function (DUF4150) 22 127 3.3E-32 T 14-10-2018 IPR025425 Domain of unknown function DUF4150 JV59_00185 77417c921ceee97004c1576233d7a228 425 Pfam PF01554 MatE 223 384 2.2E-20 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_00185 77417c921ceee97004c1576233d7a228 425 Pfam PF01554 MatE 3 159 2.5E-25 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_00185 77417c921ceee97004c1576233d7a228 425 PIRSF PIRSF006603 1 423 1.5E-123 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_00185 77417c921ceee97004c1576233d7a228 425 TIGRFAM TIGR00797 matE: MATE efflux family protein 3 389 1.4E-59 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JV59_30580 9476ceba6c346aedd3507fab10e03d01 367 Gene3D G3DSA:1.10.10.2840 239 367 5.0E-25 T 14-10-2018 JV59_30580 9476ceba6c346aedd3507fab10e03d01 367 Pfam PF05651 Putative sugar diacid recognition 2 133 3.3E-46 T 14-10-2018 IPR008599 Putative sugar diacid recognition JV59_30580 9476ceba6c346aedd3507fab10e03d01 367 Pfam PF13556 PucR C-terminal helix-turn-helix domain 305 362 1.5E-22 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain JV59_21795 4b39354c6acf4780e9b65d6910794dea 144 Pfam PF07811 TadE-like protein 8 50 3.6E-8 T 14-10-2018 IPR012495 TadE-like JV59_36340 46abc94e52a3c5bf776af99759358af1 407 Gene3D G3DSA:3.40.50.300 154 392 5.2E-45 T 14-10-2018 JV59_36340 46abc94e52a3c5bf776af99759358af1 407 Pfam PF13614 AAA domain 156 313 5.5E-9 T 14-10-2018 IPR025669 AAA domain JV59_36340 46abc94e52a3c5bf776af99759358af1 407 SUPERFAMILY SSF52540 157 392 8.21E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_17470 041eb80a513b4b1a81e82dff2629c42c 142 SUPERFAMILY SSF53850 33 129 5.1E-7 T 14-10-2018 JV59_31675 8324bf364b7195c31a2d8d4ad82eed38 72 Pfam PF11197 Protein of unknown function (DUF2835) 4 70 3.4E-28 T 14-10-2018 IPR021363 Protein of unknown function DUF2835 JV59_39880 1d68e227bd6ec0b90c376dfe97dc3327 106 Pfam PF12305 Protein of unknown function (DUF3630) 11 103 2.4E-39 T 14-10-2018 IPR022080 Protein of unknown function DUF3630 JV59_33870 7caa534bc3782c6fe1356683abd97965 182 SUPERFAMILY SSF55729 4 177 1.44E-42 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_33870 7caa534bc3782c6fe1356683abd97965 182 Gene3D G3DSA:3.40.630.30 2 178 1.0E-45 T 14-10-2018 JV59_33870 7caa534bc3782c6fe1356683abd97965 182 Pfam PF13302 Acetyltransferase (GNAT) domain 11 152 3.2E-25 T 14-10-2018 IPR000182 GNAT domain JV59_22005 3b13cab94d5f7f63364661a8a8a45c55 243 TIGRFAM TIGR03950 sidero_Fe_reduc: siderophore ferric iron reductase, AHA_1954 family 10 237 3.9E-95 T 14-10-2018 IPR023998 Siderophore ferric iron reductase, AHA1954 family JV59_34765 49975878a51f5ff6ab24ad5cbf7ff1b3 223 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 179 3.4E-28 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ JV59_32970 71ff97601c68b4536f480f434375f40b 212 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 17 212 36.88 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 JV59_32970 71ff97601c68b4536f480f434375f40b 212 Pfam PF00925 GTP cyclohydrolase II 34 185 6.6E-58 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 JV59_32970 71ff97601c68b4536f480f434375f40b 212 SUPERFAMILY SSF142695 33 186 4.71E-52 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 JV59_32970 71ff97601c68b4536f480f434375f40b 212 Gene3D G3DSA:3.40.50.10990 18 188 2.1E-62 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 JV59_30740 3c6f48bd3916d62cfae795d652499bf0 309 Pfam PF11279 Protein of unknown function (DUF3080) 5 307 8.9E-84 T 14-10-2018 IPR021431 Protein of unknown function DUF3080 JV59_24255 181dd9106d92f37017c745e92abaefd3 311 Gene3D G3DSA:1.20.1530.20 1 307 1.4E-101 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily JV59_24255 181dd9106d92f37017c745e92abaefd3 311 Pfam PF01758 Sodium Bile acid symporter family 36 212 5.4E-36 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 JV59_18375 00e884991c8111c7f9da4c7e4c04a99f 147 Pfam PF07681 DoxX 17 103 3.1E-23 T 14-10-2018 IPR032808 DoxX family JV59_31110 1b2c20c5c7d5357b330986cd09b931b5 159 Pfam PF05751 FixH 7 147 2.0E-33 T 14-10-2018 IPR008620 Nitrogen fixation protein FixH JV59_23795 3990d8ef803a085798bb15ff159b6597 63 Pfam PF11747 Killing trait 23 61 1.2E-9 T 14-10-2018 IPR021070 Killing trait, RebB JV59_31010 4407980cddbfb4cb7d92cfe91995ed6f 66 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 9 37 2.8E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal JV59_31010 4407980cddbfb4cb7d92cfe91995ed6f 66 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 1 66 2.7E-28 T 14-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing JV59_31010 4407980cddbfb4cb7d92cfe91995ed6f 66 PIRSF PIRSF036704 1 66 1.1E-30 T 14-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing JV59_16980 94c0b69697be114365428df27560fa11 139 Gene3D G3DSA:3.40.630.30 35 138 6.3E-23 T 14-10-2018 JV59_16980 94c0b69697be114365428df27560fa11 139 Pfam PF00583 Acetyltransferase (GNAT) family 38 115 2.7E-9 T 14-10-2018 IPR000182 GNAT domain JV59_16980 94c0b69697be114365428df27560fa11 139 SUPERFAMILY SSF55729 33 137 1.86E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_25475 cc2a60713bf30f395daab6d71551c4df 267 Pfam PF02517 CAAX protease self-immunity 132 216 6.0E-20 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 JV59_32435 42e36abd98c91d734fbc361b48f425da 225 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 2 219 4.8E-76 T 14-10-2018 IPR005261 Conserved hypothetical protein CHP00659 JV59_32435 42e36abd98c91d734fbc361b48f425da 225 Pfam PF04172 LrgB-like family 6 218 1.0E-72 T 14-10-2018 IPR007300 CidB/LrgB family JV59_28280 e97f91434dcc1f7c1597567e3970112f 273 Pfam PF11207 Protein of unknown function (DUF2989) 16 218 1.9E-72 T 14-10-2018 IPR021372 Protein of unknown function DUF2989 JV59_16695 9b8acc37daf66ee08c60b46c6a50c9f7 117 SUPERFAMILY SSF47413 5 75 2.48E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JV59_16695 9b8acc37daf66ee08c60b46c6a50c9f7 117 Gene3D G3DSA:1.10.260.40 2 84 1.6E-12 T 14-10-2018 JV59_37520 2af192978ec490a03f45f74a7fed8f5f 438 Pfam PF00999 Sodium/hydrogen exchanger family 14 416 5.2E-56 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 JV59_39960 b2379cbb81e725ec65616a4d547b71ae 242 Pfam PF02602 Uroporphyrinogen-III synthase HemD 15 224 3.7E-34 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JV59_39960 b2379cbb81e725ec65616a4d547b71ae 242 Gene3D G3DSA:3.40.50.10090 32 160 4.3E-65 T 14-10-2018 JV59_39960 b2379cbb81e725ec65616a4d547b71ae 242 SUPERFAMILY SSF69618 1 239 6.28E-49 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JV59_39960 b2379cbb81e725ec65616a4d547b71ae 242 Gene3D G3DSA:3.40.50.10090 4 239 4.3E-65 T 14-10-2018 JV59_25190 c28b828685eebabb6814dc30ec1726a8 203 Pfam PF11140 Protein of unknown function (DUF2913) 9 178 4.7E-22 T 14-10-2018 IPR021316 Protein of unknown function DUF2913 JV59_18270 c4159f09f7ad57688df3d3c7f2fb3990 194 Pfam PF01810 LysE type translocator 14 193 2.3E-15 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_34170 1f951fc00489c974567fbea8e214cbfc 182 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 156 1.5E-27 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ JV59_25125 abc794637f99f1e1b5bfbd3ba738c03a 213 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 1 175 4.1E-52 T 14-10-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN JV59_30810 8010437d3624ab720f0d29129a62e64d 161 Pfam PF07811 TadE-like protein 20 62 3.9E-11 T 14-10-2018 IPR012495 TadE-like JV59_27530 16d9c38545c5793fdbb093b46ec50c2b 139 Pfam PF09842 Predicted membrane protein (DUF2069) 14 116 2.8E-34 T 14-10-2018 IPR018643 Protein of unknown function DUF2069, membrane JV59_16065 e8b45fbf09d3e6058abc30231b50395b 444 Pfam PF07394 Protein of unknown function (DUF1501) 27 423 5.8E-48 T 14-10-2018 IPR010869 Protein of unknown function DUF1501 JV59_16065 e8b45fbf09d3e6058abc30231b50395b 444 SUPERFAMILY SSF53649 275 376 4.32E-5 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 JV59_39305 0f88f0b14122df847f861c194593780b 129 Pfam PF03899 ATP synthase I chain 15 111 3.2E-21 T 14-10-2018 IPR005598 ATP synthase protein I JV59_33345 cc0170b6df886287f323de56a20c2154 160 Pfam PF11747 Killing trait 8 74 3.6E-21 T 14-10-2018 IPR021070 Killing trait, RebB JV59_26825 92cb208d1e009db7b0284136f28df060 129 Gene3D G3DSA:3.30.310.230 2 128 8.2E-47 T 14-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 JV59_26825 92cb208d1e009db7b0284136f28df060 129 Pfam PF07417 Transcriptional regulator Crl 6 123 1.1E-49 T 14-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 JV59_26825 92cb208d1e009db7b0284136f28df060 129 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 4 129 31.09 T 14-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 JV59_36775 39768ddc49d06f76d7627a33a6f29f0f 317 Pfam PF03186 CobD/Cbib protein 18 293 5.5E-31 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 JV59_22885 4dc0dfc436876539973afa998aafdca1 302 Hamap MF_01384 Urease accessory protein UreD [ureD]. 30 286 28.29 T 14-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 JV59_22885 4dc0dfc436876539973afa998aafdca1 302 Pfam PF01774 UreD urease accessory protein 72 272 5.5E-46 T 14-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 JV59_38090 1dc7960e92a562fd999a8b4b9e33c989 482 Pfam PF03606 C4-dicarboxylate anaerobic carrier 21 477 6.3E-138 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 JV59_22990 ab8bcd6f1fec46114908ec50775e2239 98 SUPERFAMILY SSF46626 20 94 1.02E-18 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_22990 ab8bcd6f1fec46114908ec50775e2239 98 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 25 90 9.5E-7 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JV59_22990 ab8bcd6f1fec46114908ec50775e2239 98 Gene3D G3DSA:1.10.760.10 20 93 3.4E-21 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JV59_20495 4e516ef5fd60d48036b4a8d51e8545a1 472 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 286 461 1.1E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JV59_20495 4e516ef5fd60d48036b4a8d51e8545a1 472 Gene3D G3DSA:1.10.3720.10 228 459 2.4E-52 T 14-10-2018 IPR035906 MetI-like superfamily JV59_20495 4e516ef5fd60d48036b4a8d51e8545a1 472 SUPERFAMILY SSF161098 28 472 1.09E-58 T 14-10-2018 IPR035906 MetI-like superfamily JV59_39545 5d0f9e0cde02e4def55bbc7411d4a006 107 Pfam PF10625 Universal stress protein B (UspB) 1 106 5.3E-50 T 14-10-2018 IPR019598 Universal stress protein B JV59_39545 5d0f9e0cde02e4def55bbc7411d4a006 107 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 37.621 T 14-10-2018 IPR019598 Universal stress protein B JV59_30725 1e35799dfbb1bafa864a3954d76cec24 279 Pfam PF00691 OmpA family 160 254 3.5E-21 T 14-10-2018 IPR006665 OmpA-like domain JV59_30725 1e35799dfbb1bafa864a3954d76cec24 279 PRINTS PR01021 OMPA domain signature 205 221 4.4E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_30725 1e35799dfbb1bafa864a3954d76cec24 279 PRINTS PR01021 OMPA domain signature 160 182 4.4E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_30725 1e35799dfbb1bafa864a3954d76cec24 279 PRINTS PR01021 OMPA domain signature 190 205 4.4E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JV59_30725 1e35799dfbb1bafa864a3954d76cec24 279 Gene3D G3DSA:3.30.1330.60 132 270 8.2E-27 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_30725 1e35799dfbb1bafa864a3954d76cec24 279 SUPERFAMILY SSF103088 148 260 1.31E-27 T 14-10-2018 IPR036737 OmpA-like domain superfamily JV59_31615 21b9648e14aa2eadbc93c1fa0a8d35ac 103 Pfam PF12321 Protein of unknown function (DUF3634) 2 101 7.0E-41 T 14-10-2018 IPR022090 Protein of unknown function DUF3634 JV59_00990 5fe82510ffbd013e148bc477a4884159 185 Pfam PF02325 YGGT family 109 173 9.0E-20 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 JV59_00990 5fe82510ffbd013e148bc477a4884159 185 Pfam PF02325 YGGT family 10 77 3.2E-19 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 JV59_33360 3c2eee010676bd28b30bd0a41aa3b392 89 Pfam PF11747 Killing trait 11 78 1.3E-29 T 14-10-2018 IPR021070 Killing trait, RebB JV59_38580 6f57c6a799810fb61d6fcd6bbdc58f02 241 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 2 177 1.2E-35 T 14-10-2018 IPR002654 Glycosyl transferase, family 25 JV59_25180 5c595e03d594459a9e6189cd7a063f0f 100 Pfam PF07178 TraL protein 8 98 6.9E-16 T 14-10-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 JV59_25180 5c595e03d594459a9e6189cd7a063f0f 100 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 7 99 2.0E-18 T 14-10-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 JV59_39955 147b1ace6753d92862f55820276488a9 401 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 62 390 3.3E-103 T 14-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX JV59_19265 6234663770df98c182a52e6757b9c70b 82 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 4 77 2.1E-28 T 14-10-2018 IPR018680 Protein of unknown function DUF2164 JV59_28335 0e1766d6f96723f5b4e6d1508ef4ec55 151 Pfam PF05433 Glycine zipper 2TM domain 56 93 5.3E-9 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 JV59_23935 e62c8cae586d87461efebcca18b427ac 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 417 2.0E-112 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit JV59_23935 e62c8cae586d87461efebcca18b427ac 427 PIRSF PIRSF006066 1 427 3.5E-131 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 JV59_23935 e62c8cae586d87461efebcca18b427ac 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 18 424 1.5E-120 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 JV59_24590 05c54e52a6282dfbfbd04925544013a2 161 Gene3D G3DSA:3.40.630.30 2 161 6.2E-48 T 14-10-2018 JV59_24590 05c54e52a6282dfbfbd04925544013a2 161 SUPERFAMILY SSF55729 1 159 4.63E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_24590 05c54e52a6282dfbfbd04925544013a2 161 Pfam PF00583 Acetyltransferase (GNAT) family 21 132 7.5E-10 T 14-10-2018 IPR000182 GNAT domain JV59_21060 9a4b43a512ab69c19ac235a472f5d48e 277 Pfam PF12294 Protein of unknown function (DUF3626) 24 150 4.4E-42 T 14-10-2018 IPR022074 Protein of unknown function DUF3626 JV59_21060 9a4b43a512ab69c19ac235a472f5d48e 277 Pfam PF12294 Protein of unknown function (DUF3626) 152 252 8.1E-18 T 14-10-2018 IPR022074 Protein of unknown function DUF3626 JV59_33160 ee004db98c77e2b33834eccfb070b1f3 277 Gene3D G3DSA:3.60.130.10 1 275 3.3E-84 T 14-10-2018 JV59_33160 ee004db98c77e2b33834eccfb070b1f3 277 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 3 268 8.1E-60 T 14-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 JV59_33160 ee004db98c77e2b33834eccfb070b1f3 277 SUPERFAMILY SSF51197 3 273 4.44E-84 T 14-10-2018 JV59_20355 8f2e412278b380eae4c03195a6831b1b 370 Pfam PF04338 Protein of unknown function, DUF481 153 369 2.3E-38 T 14-10-2018 IPR007433 Protein of unknown function DUF481 JV59_37700 483a6199b7de9c7a84f47d930b563e6d 96 SUPERFAMILY SSF141086 31 94 1.01E-5 T 14-10-2018 IPR037221 H-type lectin domain superfamily JV59_37700 483a6199b7de9c7a84f47d930b563e6d 96 Gene3D G3DSA:2.60.40.2080 2 95 1.5E-5 T 14-10-2018 IPR037221 H-type lectin domain superfamily JV59_37700 483a6199b7de9c7a84f47d930b563e6d 96 Pfam PF09458 H-type lectin domain 30 94 6.3E-7 T 14-10-2018 IPR019019 H-type lectin domain GO:0007155|GO:0030246 JV59_28805 c788d59cce0e9bd6fb56d5aaeb052667 259 Pfam PF01925 Sulfite exporter TauE/SafE 12 250 2.9E-47 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 JV59_21685 cd25a1fb4b3ef670e44df286c350fbe3 279 Pfam PF02361 Cobalt transport protein 17 234 1.6E-30 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component JV59_23755 507e24a066e1ea142be7a827a7145891 66 Pfam PF11747 Killing trait 13 61 1.4E-7 T 14-10-2018 IPR021070 Killing trait, RebB JV59_33605 06a73be1fd72c0f1075d33aea064bb68 422 Pfam PF06097 Bacterial protein of unknown function (DUF945) 5 411 3.0E-35 T 14-10-2018 IPR010352 Protein of unknown function DUF945 JV59_29300 8bcd5f317a7afb0a922cc29c242d639f 210 Pfam PF02592 Putative vitamin uptake transporter 38 194 9.8E-13 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 JV59_29300 8bcd5f317a7afb0a922cc29c242d639f 210 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 16 201 5.5E-15 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 JV59_22655 5f2c85241c0cdd8f6e9b384b45b6cca0 283 Gene3D G3DSA:3.40.50.1820 2 281 7.2E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_22655 5f2c85241c0cdd8f6e9b384b45b6cca0 283 SUPERFAMILY SSF53474 2 281 8.25E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_22655 5f2c85241c0cdd8f6e9b384b45b6cca0 283 Pfam PF00561 alpha/beta hydrolase fold 31 269 3.1E-13 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JV59_33410 452713921407595cdecfad3004acbb1f 635 SUPERFAMILY SSF56300 146 553 5.24E-12 T 14-10-2018 JV59_33410 452713921407595cdecfad3004acbb1f 635 Gene3D G3DSA:3.60.21.70 303 565 5.7E-10 T 14-10-2018 IPR038607 PhoD-like superfamily JV59_28975 01675b28a77a18faa298ab2376c6da8d 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 4.9E-35 T 14-10-2018 IPR021284 Protein of unknown function DUF2750 JV59_27740 e4eaea9360c35d12f65a6d9ba36bb16e 165 Pfam PF03748 Flagellar basal body-associated protein FliL 66 165 4.1E-14 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 JV59_22395 be41797ab40289e5d707c16f40fdbfd4 382 Pfam PF07394 Protein of unknown function (DUF1501) 228 366 5.1E-36 T 14-10-2018 IPR010869 Protein of unknown function DUF1501 JV59_31425 9ae9b5a42fd85c5a7e1fd2f8b3961c1f 140 Pfam PF12375 Phage protein 55 122 5.6E-19 T 14-10-2018 IPR021077 Bacteriophage phi-Lf, Orf112 JV59_26410 279f34f52e7405bbba8cc2395a254232 76 Gene3D G3DSA:1.10.1660.70 1 72 2.1E-6 T 14-10-2018 IPR038147 Cox superfamily JV59_32110 249f4687abb369aeeda8b277c4216adb 191 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 82 2.3E-9 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 JV59_22475 4a4948f8f0b4dd3a20a9466f76a63934 128 Pfam PF04134 Protein of unknown function, DUF393 6 112 1.5E-22 T 14-10-2018 IPR007263 Protein of unknown function DUF393 JV59_22315 f436b6a803f4b3c9e2e7b2e7a098e2c7 145 Pfam PF04945 YHS domain 38 83 3.8E-14 T 14-10-2018 IPR007029 YHS domain JV59_17485 9de5cf3e8df1d28e220607dad531946a 254 Pfam PF03741 Integral membrane protein TerC family 16 203 8.7E-43 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 JV59_22245 32c701fc40b174f6a7284b3852dc4d95 226 Pfam PF08856 Protein of unknown function (DUF1826) 27 224 1.7E-63 T 14-10-2018 IPR014955 Protein of unknown function DUF1826 JV59_23905 05b5a4b248637d9a03348b2e49b95179 296 Pfam PF11860 N-acetylmuramidase 127 294 6.7E-62 T 14-10-2018 IPR024408 N-acetylmuramidase JV59_38625 0c88362ad461099b85f2d4a7e36bffb2 351 Gene3D G3DSA:3.40.50.2000 6 156 2.8E-24 T 14-10-2018 JV59_38625 0c88362ad461099b85f2d4a7e36bffb2 351 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 75 304 2.3E-49 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 JV59_38625 0c88362ad461099b85f2d4a7e36bffb2 351 Gene3D G3DSA:3.40.50.2000 162 348 2.0E-36 T 14-10-2018 JV59_38625 0c88362ad461099b85f2d4a7e36bffb2 351 SUPERFAMILY SSF53756 11 343 8.32E-81 T 14-10-2018 JV59_23775 b4aabba3a9aedc3e9bfe455c62a732ce 97 Pfam PF11747 Killing trait 14 59 7.7E-4 T 14-10-2018 IPR021070 Killing trait, RebB JV59_18380 86222aa701407617ce70d21137f124b9 197 Pfam PF01810 LysE type translocator 14 190 1.5E-11 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_21620 1f6f8ca7124a5216abe85d70e91c9423 392 Pfam PF07690 Major Facilitator Superfamily 15 344 4.6E-14 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JV59_21620 1f6f8ca7124a5216abe85d70e91c9423 392 Gene3D G3DSA:1.20.1250.20 199 384 2.6E-16 T 14-10-2018 JV59_21620 1f6f8ca7124a5216abe85d70e91c9423 392 Gene3D G3DSA:1.20.1250.20 9 197 7.7E-6 T 14-10-2018 JV59_21620 1f6f8ca7124a5216abe85d70e91c9423 392 SUPERFAMILY SSF103473 14 377 4.05E-36 T 14-10-2018 IPR036259 MFS transporter superfamily JV59_29740 621c605c7d6a0f2d54416a87a1b8c5bd 187 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 153 1.9E-27 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ JV59_37110 31485519020edd275a545e6d19b8dd58 260 Pfam PF04784 Protein of unknown function, DUF547 88 198 8.0E-23 T 14-10-2018 IPR006869 Domain of unknown function DUF547 JV59_18055 df1f361e92f1f4cf38219f02775dc451 283 Pfam PF02698 DUF218 domain 6 126 6.4E-15 T 14-10-2018 IPR003848 Domain of unknown function DUF218 JV59_24720 a0cc38975933b626caae09994993dd1d 136 Pfam PF12647 RNHCP domain 12 100 6.0E-35 T 14-10-2018 IPR024439 RNHCP domain JV59_20385 5d827c0f6ae789ba8dcf7f6bd1e35952 690 Pfam PF05787 Bacterial protein of unknown function (DUF839) 70 650 1.7E-128 T 14-10-2018 IPR008557 Protein of unknown function DUF839 JV59_30975 31d0612142a103af90825126d46e2e61 183 SUPERFAMILY SSF81342 5 181 1.02E-23 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 JV59_30975 31d0612142a103af90825126d46e2e61 183 Pfam PF01292 Prokaryotic cytochrome b561 8 182 7.4E-23 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 JV59_23590 b30624ac9427970a8c1553e3ef9a9eb4 340 Pfam PF01757 Acyltransferase family 6 322 4.5E-24 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 JV59_19225 7508339d27aa592a0d4752cfaf9c4da1 319 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 3 307 8.3E-102 T 14-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 JV59_19225 7508339d27aa592a0d4752cfaf9c4da1 319 Pfam PF03741 Integral membrane protein TerC family 75 275 3.1E-53 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 JV59_19705 7d89222120793aaf8438024572a22e39 491 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 18 490 1.8E-214 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath JV59_19705 7d89222120793aaf8438024572a22e39 491 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 68 490 1.0E-176 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath JV59_22590 dd1efe69cfcf0c36cf61c8b39a4012c1 166 SUPERFAMILY SSF56524 43 164 2.49E-12 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 JV59_40235 391173826de9f1dfda776c69d6f777f1 382 Gene3D G3DSA:2.60.40.10 278 374 3.9E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_40235 391173826de9f1dfda776c69d6f777f1 382 Gene3D G3DSA:2.60.40.10 66 174 4.2E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold JV59_25485 5d151ead89c9fb97928df679d3d0ff14 355 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 176 7.7E-31 T 14-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase JV59_20065 dc9437d5bb315ca4040831ac92d7187a 147 Gene3D G3DSA:3.30.450.20 6 140 7.4E-31 T 14-10-2018 JV59_20065 dc9437d5bb315ca4040831ac92d7187a 147 Pfam PF00989 PAS fold 16 134 2.4E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 JV59_20065 dc9437d5bb315ca4040831ac92d7187a 147 SUPERFAMILY SSF55785 10 128 2.27E-9 T 14-10-2018 IPR035965 PAS domain superfamily JV59_34560 47eecc1ace927964f20bcd438f39cc17 185 PIRSF PIRSF004982 3 185 3.7E-54 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 JV59_34560 47eecc1ace927964f20bcd438f39cc17 185 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 10 152 2.4E-34 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 JV59_34560 47eecc1ace927964f20bcd438f39cc17 185 Pfam PF03843 Outer membrane lipoprotein Slp family 18 156 7.2E-43 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 JV59_10845 47c204e8b739fe65c8bc61ab20084f2f 261 Pfam PF00950 ABC 3 transport family 1 256 2.0E-76 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 JV59_10845 47c204e8b739fe65c8bc61ab20084f2f 261 Gene3D G3DSA:1.10.3470.10 28 260 1.3E-8 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JV59_10845 47c204e8b739fe65c8bc61ab20084f2f 261 SUPERFAMILY SSF81345 2 253 9.15E-40 T 14-10-2018 IPR037294 ABC transporter, BtuC-like JV59_21805 38d05849868004ab8e38b86bc669f21c 284 Pfam PF00482 Type II secretion system (T2SS), protein F 142 270 5.4E-17 T 14-10-2018 IPR018076 Type II secretion system F domain JV59_24130 976b7b932220fcc4ec0dc7dfdb9143cf 283 Pfam PF05853 beta-keto acid cleavage enzyme 16 280 6.3E-57 T 14-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 JV59_24130 976b7b932220fcc4ec0dc7dfdb9143cf 283 Gene3D G3DSA:3.20.20.70 7 282 6.1E-59 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JV59_30715 76fffbb455b4d9e44481cf833a192029 231 SUPERFAMILY SSF52540 25 206 6.08E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JV59_30715 76fffbb455b4d9e44481cf833a192029 231 Gene3D G3DSA:3.40.50.300 8 202 3.4E-21 T 14-10-2018 JV59_29450 744dfece6ffd0308d70f2eaf6b51d84d 167 Pfam PF11066 Protein of unknown function (DUF2867) 24 155 5.8E-26 T 14-10-2018 IPR021295 Protein of unknown function DUF2867 JV59_24225 f51a561b3671277e7107e007203fab51 313 SUPERFAMILY SSF158855 101 299 3.27E-5 T 14-10-2018 JV59_17115 7a1e85ac1e2a11bb8d1c21c44cfd87f0 185 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 39 174 2.9E-19 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ JV59_18605 bb9179f147b417497edf0f00eef2c7bd 145 Pfam PF13778 Domain of unknown function (DUF4174) 25 135 1.9E-23 T 14-10-2018 IPR025232 Domain of unknown function DUF4174 JV59_19075 add98274694b809f467079229d57df95 404 Pfam PF13729 F plasmid transfer operon, TraF, protein 47 320 5.3E-71 T 14-10-2018 IPR032811 Putative conjugal transfer protein TraF-related JV59_25345 306b34ad2678728630d6510388aa3890 343 SUPERFAMILY SSF52467 11 222 1.96E-6 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JV59_34520 9d3a94dd2154cc4d4862253fbb1201ee 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 1.4E-17 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD JV59_17215 058a231f369afad319b207c2d44e39fb 198 Pfam PF01810 LysE type translocator 12 197 1.9E-38 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 JV59_16150 d8b5ba3e2bd277bdae1d4851bde89fa0 142 Pfam PF05232 Chlorhexidine efflux transporter 69 132 4.9E-21 T 14-10-2018 IPR007896 Chlorhexidine efflux transporter JV59_16150 d8b5ba3e2bd277bdae1d4851bde89fa0 142 Pfam PF05232 Chlorhexidine efflux transporter 1 63 8.0E-22 T 14-10-2018 IPR007896 Chlorhexidine efflux transporter JV59_38430 34c9dac6b617d6a131d35f1d4f7d501a 110 Pfam PF11333 Protein of unknown function (DUF3135) 10 89 2.4E-32 T 14-10-2018 IPR021482 Protein of unknown function DUF3135 JV59_40100 21a0b77715648c482e0705365bd24a80 194 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 189 4.0E-30 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 JV59_40100 21a0b77715648c482e0705365bd24a80 194 Pfam PF01914 MarC family integral membrane protein 3 192 4.5E-54 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 JV59_28210 d17447341145187034f6829af8d2cf4b 135 Pfam PF11012 Protein of unknown function (DUF2850) 45 104 4.5E-16 T 14-10-2018 IPR021271 Protein of unknown function DUF2850 JV59_32785 7588d9b4cb1d8b2c1a2234c0c7af9e51 73 Gene3D G3DSA:1.10.720.30 14 72 2.7E-30 T 14-10-2018 IPR036361 SAP domain superfamily JV59_32785 7588d9b4cb1d8b2c1a2234c0c7af9e51 73 Pfam PF09905 DNA-binding protein VF530 6 68 6.4E-35 T 14-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 JV59_23890 c1eeb2a8585a279b452f67a177543db5 207 Gene3D G3DSA:1.10.3720.10 6 112 1.1E-6 T 14-10-2018 IPR035906 MetI-like superfamily JV59_21540 108053e603c8cd567a82b8b170323a23 295 Pfam PF04116 Fatty acid hydroxylase superfamily 98 231 4.7E-27 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 JV59_16310 5478f82ea8c8c67b7ec4b6bf6301cb53 456 Pfam PF07670 Nucleoside recognition 142 234 1.2E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 JV59_31715 46a5bc1fc63aa5aaf38f8cab1d275457 877 Pfam PF02470 MlaD protein 283 374 6.3E-8 T 14-10-2018 IPR003399 Mce/MlaD JV59_31715 46a5bc1fc63aa5aaf38f8cab1d275457 877 Pfam PF02470 MlaD protein 399 463 1.1E-9 T 14-10-2018 IPR003399 Mce/MlaD JV59_31715 46a5bc1fc63aa5aaf38f8cab1d275457 877 Pfam PF02470 MlaD protein 641 705 2.0E-6 T 14-10-2018 IPR003399 Mce/MlaD JV59_31715 46a5bc1fc63aa5aaf38f8cab1d275457 877 Pfam PF02470 MlaD protein 47 137 2.2E-12 T 14-10-2018 IPR003399 Mce/MlaD JV59_31715 46a5bc1fc63aa5aaf38f8cab1d275457 877 Pfam PF02470 MlaD protein 164 223 1.9E-6 T 14-10-2018 IPR003399 Mce/MlaD JV59_31715 46a5bc1fc63aa5aaf38f8cab1d275457 877 Pfam PF02470 MlaD protein 746 805 6.8E-6 T 14-10-2018 IPR003399 Mce/MlaD JV59_30165 ecf6d76dcc404af720a2c1c39cf6428b 247 Pfam PF04338 Protein of unknown function, DUF481 36 247 3.0E-31 T 14-10-2018 IPR007433 Protein of unknown function DUF481 JV59_20475 7e46edb58c201e6a08538df3e9283f63 336 Pfam PF16946 OMPG-porin 1 family 45 336 3.1E-114 T 14-10-2018 IPR031605 Putative OMPG-porin 1 family JV59_35195 e9dd99dc7a8c0adcd7ab4262f3d78785 165 Pfam PF03748 Flagellar basal body-associated protein FliL 64 165 4.9E-19 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 JV59_26695 8bafbdf32c3efaf0d0fdde964d9761f4 183 Pfam PF01814 Hemerythrin HHE cation binding domain 2 135 6.5E-12 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 JV59_26695 8bafbdf32c3efaf0d0fdde964d9761f4 183 Gene3D G3DSA:1.20.120.520 1 153 8.9E-16 T 14-10-2018 JV59_29085 eeed811caeee23007d98717ff9ef634d 201 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JV59_29085 eeed811caeee23007d98717ff9ef634d 201 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 3.7E-11 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JV59_29085 eeed811caeee23007d98717ff9ef634d 201 Gene3D G3DSA:1.20.120.1760 3 198 4.4E-19 T 14-10-2018 JV59_37570 03008a7a9f09826aeea81e3c20824528 219 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 3 216 1.3E-53 T 14-10-2018 IPR026387 Outer membrane protein JV59_19730 7072c8a50b9fbb03c0c18f9be3116211 327 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 24 302 4.9E-65 T 14-10-2018 IPR018683 Domain of unknown function DUF2169 JV59_21510 a8d24acc5e31149c3c3f87b14465d93c 457 Pfam PF07670 Nucleoside recognition 142 238 9.7E-8 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 JV59_34925 2bcb33c9e59824d075e07f4583217836 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 55 1.9E-14 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 JV59_34925 2bcb33c9e59824d075e07f4583217836 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 5.9E-17 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 JV59_35465 d3f44d01db11018b04b97e9ed42417e9 345 Pfam PF12069 Protein of unknown function (DUF3549) 3 340 1.4E-133 T 14-10-2018 IPR021936 Protein of unknown function DUF3549 JV59_24555 9d8b235561ce7111b95da500faafd1c4 165 Pfam PF11066 Protein of unknown function (DUF2867) 13 157 1.1E-40 T 14-10-2018 IPR021295 Protein of unknown function DUF2867 JV59_35820 99d0489f9267d25a45ecb82e9647e17a 490 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 13 468 4.9E-112 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 JV59_38055 a4ad6c9a7e0a7da96f27a48fbc1e1310 383 Pfam PF03534 Salmonella virulence plasmid 65kDa B protein 46 221 1.2E-15 T 14-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 JV59_24320 03893abe1f81cc6acb5d07e02e7ccee8 240 Pfam PF13460 NAD(P)H-binding 7 222 2.1E-22 T 14-10-2018 IPR016040 NAD(P)-binding domain JV59_24320 03893abe1f81cc6acb5d07e02e7ccee8 240 SUPERFAMILY SSF51735 1 228 2.15E-20 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily JV59_24320 03893abe1f81cc6acb5d07e02e7ccee8 240 Gene3D G3DSA:3.40.50.720 1 237 4.4E-27 T 14-10-2018 JV59_40080 cf2b42492625b4a5dcde921fd9100e87 109 Gene3D G3DSA:2.40.50.660 32 109 2.2E-7 T 14-10-2018 JV59_40080 cf2b42492625b4a5dcde921fd9100e87 109 Pfam PF10694 Protein of unknown function (DUF2500) 5 105 4.7E-25 T 14-10-2018 IPR019635 Protein of unknown function DUF2500 JV59_26305 128982132097b3edaeba22df7048f93a 479 PIRSF PIRSF028153 1 479 8.5E-190 T 14-10-2018 IPR016871 MSHA biogenesis protein, MshI JV59_26305 128982132097b3edaeba22df7048f93a 479 SUPERFAMILY SSF53067 43 154 2.72E-11 T 14-10-2018 JV59_34605 2889880f4828b6da75e5e0de11bac083 276 Pfam PF02517 CAAX protease self-immunity 173 263 4.4E-20 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 JV59_36785 fe5a849e248c7022b85743610be8d16e 206 Pfam PF03458 UPF0126 domain 95 165 1.4E-18 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 JV59_36785 fe5a849e248c7022b85743610be8d16e 206 Pfam PF03458 UPF0126 domain 9 81 8.3E-22 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 JV59_28750 4d7cacbdbb1e738b08e07f40020079a8 467 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 23 237 1.4E-17 T 14-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 JV59_23710 feb7ad356cc0c65740134cd38d932486 242 Pfam PF07670 Nucleoside recognition 85 179 1.4E-10 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 JV59_16135 044adbd014d93bc5cdbfa46c0712354e 248 Gene3D G3DSA:3.40.50.720 1 246 4.2E-31 T 14-10-2018 JV59_16135 044adbd014d93bc5cdbfa46c0712354e 248 SUPERFAMILY SSF69572 3 187 2.88E-31 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 JV59_16135 044adbd014d93bc5cdbfa46c0712354e 248 Pfam PF00899 ThiF family 3 155 3.1E-27 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 JV59_17335 6f03b5c733e90a4ab8aa3ec7448c7372 117 Pfam PF11225 Protein of unknown function (DUF3024) 60 115 5.3E-16 T 14-10-2018 IPR021388 Bacteriophage 933W, L0084 JV59_27975 7191d267b013a81fffb6d12f840dbc2f 721 Pfam PF05170 AsmA family 2 609 1.5E-128 T 14-10-2018 IPR007844 AsmA JV59_20045 11267b186349b0494cdfe72f0cb86de7 224 Pfam PF04172 LrgB-like family 6 218 2.3E-63 T 14-10-2018 IPR007300 CidB/LrgB family JV59_24505 e1ec21299270e2c8c0e4f83349c0c2d0 140 SUPERFAMILY SSF55729 26 114 9.39E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase JV59_24505 e1ec21299270e2c8c0e4f83349c0c2d0 140 Gene3D G3DSA:3.40.630.30 5 134 1.6E-13 T 14-10-2018 JV59_24505 e1ec21299270e2c8c0e4f83349c0c2d0 140 Pfam PF13673 Acetyltransferase (GNAT) domain 15 113 5.3E-9 T 14-10-2018 IPR000182 GNAT domain JV59_01910 3df0f2a9bdeccd33948b06b08ceedaef 146 Pfam PF06853 Protein of unknown function (DUF1249) 27 139 8.9E-41 T 14-10-2018 IPR009659 Protein of unknown function DUF1249 JV59_29790 413120c4775792a3c92506c1cf1b2a35 364 SUPERFAMILY SSF63829 113 326 1.18E-7 T 14-10-2018 JV59_33295 deb00196b7637920714f886607ae72d3 318 SUPERFAMILY SSF143422 16 192 5.49E-19 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 JV59_33295 deb00196b7637920714f886607ae72d3 318 SMART SM01321 12 187 0.0032 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 JV59_36305 6fefa4d70b88fece5905c2da48146de8 360 Pfam PF14378 PAP2 superfamily 139 346 8.9E-29 T 14-10-2018 IPR026841 Inositolphosphotransferase Aur1/Ipt1 JV59_22470 a131c97ff695f3fa13443adc8e83d084 261 Pfam PF14247 Putative metallopeptidase 32 254 2.3E-65 T 14-10-2018 IPR025644 Putative metallopeptidase JV59_24070 d63f68761fa68ea704abdf642c19081a 369 Pfam PF08308 PEGA domain 300 364 2.4E-23 T 14-10-2018 IPR013229 PEGA JV59_28525 a013ae859903b148883781822342ca93 265 Pfam PF03649 Uncharacterised protein family (UPF0014) 12 249 4.8E-74 T 14-10-2018 IPR005226 UPF0014 family JV59_22265 a6a302ba0507020b1d2c1c69f27540bf 74 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 2 61 1.8E-26 T 14-10-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system JV59_19095 8dd1a5c995abcd5c2d843dfd3fb3014b 123 Pfam PF11782 Protein of unknown function (DUF3319) 1 89 2.4E-40 T 14-10-2018 IPR021753 Protein of unknown function DUF3319 JV59_16690 7e1c96b417f84a4b47bb4d43838b1d0c 173 Pfam PF01292 Prokaryotic cytochrome b561 8 173 3.4E-17 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 JV59_16690 7e1c96b417f84a4b47bb4d43838b1d0c 173 SUPERFAMILY SSF81342 7 173 4.47E-20 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 JV59_17860 631f1f3f8ba050a2b5e0c113d28c4c42 324 Pfam PF14057 GGGtGRT protein 5 320 4.1E-175 T 14-10-2018 IPR025964 GGGtGRT protein JV59_28905 e2073f93583650f02bb96b71dc99a524 434 Pfam PF00294 pfkB family carbohydrate kinase 77 292 4.0E-9 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB JV59_28905 e2073f93583650f02bb96b71dc99a524 434 SUPERFAMILY SSF53613 31 416 2.18E-42 T 14-10-2018 IPR029056 Ribokinase-like JV59_00555 732ce01fe5df6d4039b95470912000d9 1253 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 917 1252 9.1E-66 T 14-10-2018 IPR007452 Translocation and assembly module TamB JV59_19215 b401119fcd97323ab5f17437d3308c3a 232 SUPERFAMILY SSF52833 22 227 1.73E-48 T 14-10-2018 IPR036249 Thioredoxin-like superfamily JV59_19215 b401119fcd97323ab5f17437d3308c3a 232 Pfam PF06764 Protein of unknown function (DUF1223) 28 215 8.2E-44 T 14-10-2018 IPR010634 Protein of unknown function DUF1223 JV59_17540 3caf53f18f01a530ad4d0659119d5f89 278 Gene3D G3DSA:2.60.40.1080 29 115 1.3E-7 T 14-10-2018 JV59_33225 927c94e22b60cc916aeea99e874dae06 41 Pfam PF08056 Tryptophan operon leader peptide 1 41 1.4E-22 T 14-10-2018 IPR012639 Tryptophan operon leader peptide JV59_22330 70d19e0c6fff8a0ae48e9b6ea9c68699 376 SUPERFAMILY SSF56059 113 179 3.33E-6 T 14-10-2018 JV59_32265 eb303e25afcd0f4c3d02d73e1bce06d0 110 SUPERFAMILY SSF160719 9 108 2.35E-6 T 14-10-2018 JV59_19565 57b5bf52b3ae93e3e83a22df9665afe3 518 Pfam PF03806 AbgT putative transporter family 14 517 7.7E-123 T 14-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 JV59_23515 741efbb74a1fdc899f74a584555e9b67 359 Pfam PF03773 Predicted permease 10 355 3.3E-61 T 14-10-2018 IPR005524 Predicted permease DUF318 JV59_32100 eb5a77e163a54d2bdec1dcbdbc275582 186 Pfam PF07209 Protein of unknown function (DUF1415) 10 176 6.7E-68 T 14-10-2018 IPR009858 Protein of unknown function DUF1415 JV59_38275 34ecb93db9a86b9896a33409713b30fc 320 Pfam PF13807 G-rich domain on putative tyrosine kinase 248 314 2.6E-11 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain JV59_38275 34ecb93db9a86b9896a33409713b30fc 320 Pfam PF02706 Chain length determinant protein 22 123 5.5E-11 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 JV59_01665 7e3c5d2ffad4f76009777275ed3ef71f 361 Pfam PF01594 AI-2E family transporter 14 347 1.5E-55 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like JV59_21845 1baccf4f7d08b231c2dcaee23286ca5b 1628 Pfam PF07603 Protein of unknown function (DUF1566) 1368 1463 7.3E-9 T 14-10-2018 IPR011460 Protein of unknown function DUF1566 JV59_27040 9386d6a8e48cf05208b0c1aa140f5575 199 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 187 1.4E-34 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT JV59_24430 940acca33f0e3dc2ea71f651eec3f791 260 Pfam PF01925 Sulfite exporter TauE/SafE 17 253 9.6E-36 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 JV59_29875 89d7b4dbf374bbd71b946b1103e976fc 112 Pfam PF04320 Protein with unknown function (DUF469) 11 111 1.5E-33 T 14-10-2018 IPR007416 Protein of unknown function DUF469 JV59_22335 f382e782dbff25cf97527c438917883f 199 Pfam PF09335 SNARE associated Golgi protein 50 150 3.1E-10 T 14-10-2018 IPR032816 SNARE associated Golgi protein JV59_19800 dc945cad442c48dfae137e6aa96d731b 179 Pfam PF11810 Domain of unknown function (DUF3332) 7 173 1.2E-44 T 14-10-2018 IPR021768 Protein of unknown function DUF3332 JV59_25615 b14dbe18a6fd6f3711c373c2c6994a44 71 Pfam PF11391 Protein of unknown function (DUF2798) 10 67 5.8E-16 T 14-10-2018 IPR021529 Protein of unknown function DUF2798 JV59_30330 199dbb641c0431a15ccacd6d7f0309e0 189 Pfam PF06042 Nucleotidyltransferase 27 180 1.3E-53 T 14-10-2018 IPR009267 Putative nucleotidyltransferase JV59_22325 a2b660b2b00c87a53bd2047fc8cb3f46 182 SUPERFAMILY SSF109854 28 162 7.78E-6 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes JV59_30430 ea06d839fb10ead4f47f35c07a4dd828 268 SUPERFAMILY SSF53850 35 243 3.37E-12 T 14-10-2018 JV59_35470 96a722b5cdd84fee5a6e97a7c80f249d 99 Pfam PF11743 Protein of unknown function (DUF3301) 6 96 1.4E-29 T 14-10-2018 IPR021732 Protein of unknown function DUF3301 JV59_33140 f8f5002c9f64a6c39571fcecc77bc7d4 274 Pfam PF10977 Protein of unknown function (DUF2797) 38 270 6.7E-95 T 14-10-2018 IPR021246 Protein of unknown function DUF2797 JV59_34120 69476a6dcd61897ba7bc921972883edc 651 SUPERFAMILY SSF53474 280 524 3.9E-16 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold JV59_35670 77161bebbffce8c1a7c1f6e621cc8e1b 116 Pfam PF12286 Protein of unknown function (DUF3622) 1 70 1.4E-34 T 14-10-2018 IPR022069 Protein of unknown function DUF3622 JV59_35530 c5beb9e9225e3b47512061e79c2b63cd 250 Pfam PF08907 Domain of unknown function (DUF1853) 43 216 2.1E-33 T 14-10-2018 IPR015003 Protein of unknown function DUF1853 JV59_17170 c24b1b5abd8b2f4881f635e93f9fc514 339 Pfam PF03824 High-affinity nickel-transport protein 57 327 2.5E-33 T 14-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 JV59_18305 d4fc7c41f9313f5c5b3e12baf8015cd6 247 Pfam PF13795 HupE / UreJ protein 63 214 1.3E-49 T 14-10-2018 IPR032809 Putative HupE/UreJ protein JV59_35970 8594a5c09fb33e26df6c655966163535 129 Pfam PF11012 Protein of unknown function (DUF2850) 43 120 2.3E-26 T 14-10-2018 IPR021271 Protein of unknown function DUF2850