locus-tag class description IX92_00005 PF01134 Glucose inhibited division protein A IX92_00005 PF13932 GidA associated domain IX92_00015 PF13614 AAA domain IX92_00020 PF02195 ParB-like nuclease domain IX92_00020 PF17762 HTH domain found in ParB protein IX92_00025 PF03899 ATP synthase I chain IX92_00030 PF00119 ATP synthase A chain IX92_00035 PF00137 ATP synthase subunit C IX92_00040 PF00430 ATP synthase B/B' CF(0) IX92_00045 PF00213 ATP synthase delta (OSCP) subunit IX92_00050 PF00306 ATP synthase alpha/beta chain, C terminal domain IX92_00050 PF02874 ATP synthase alpha/beta family, beta-barrel domain IX92_00050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IX92_00055 PF00231 ATP synthase IX92_00060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IX92_00060 PF02874 ATP synthase alpha/beta family, beta-barrel domain IX92_00065 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain IX92_00065 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IX92_00070 PF12804 MobA-like NTP transferase domain IX92_00070 PF00132 Bacterial transferase hexapeptide (six repeats) IX92_00075 PF00528 Binding-protein-dependent transport system inner membrane component IX92_00080 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX92_00085 PF07690 Major Facilitator Superfamily IX92_00090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_00090 PF03466 LysR substrate binding domain IX92_00095 PF00990 Diguanylate cyclase, GGDEF domain IX92_00100 PF02803 Thiolase, C-terminal domain IX92_00100 PF00108 Thiolase, N-terminal domain IX92_00105 PF00378 Enoyl-CoA hydratase/isomerase IX92_00105 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IX92_00105 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IX92_00110 PF01205 Uncharacterized protein family UPF0029 IX92_00110 PF09186 Domain of unknown function (DUF1949) IX92_00115 PF02386 Cation transport protein IX92_00120 PF12724 Flavodoxin domain IX92_00170 PF07732 Multicopper oxidase IX92_00170 PF07731 Multicopper oxidase IX92_00170 PF00394 Multicopper oxidase IX92_00175 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IX92_00180 PF13667 ThiC-associated domain IX92_00180 PF01964 Radical SAM ThiC family IX92_00185 PF02581 Thiamine monophosphate synthase IX92_00190 PF00899 ThiF family IX92_00200 PF05690 Thiazole biosynthesis protein ThiG IX92_00205 PF06968 Biotin and Thiamin Synthesis associated domain IX92_00205 PF04055 Radical SAM superfamily IX92_00210 PF00557 Metallopeptidase family M24 IX92_00210 PF01321 Creatinase/Prolidase N-terminal domain IX92_00215 PF03466 LysR substrate binding domain IX92_00215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_00220 PF07690 Major Facilitator Superfamily IX92_00230 PF01037 Lrp/AsnC ligand binding domain IX92_00235 PF00563 EAL domain IX92_00235 PF00990 Diguanylate cyclase, GGDEF domain IX92_00235 PF08448 PAS fold IX92_00240 PF04445 Putative SAM-dependent methyltransferase IX92_00250 PF00892 EamA-like transporter family IX92_00255 PF00582 Universal stress protein family IX92_00260 PF00210 Ferritin-like domain IX92_00265 PF10625 Universal stress protein B (UspB) IX92_00275 PF01117 Aerolysin toxin IX92_00275 PF03440 Aerolysin/Pertussis toxin (APT) domain IX92_00295 PF12852 Cupin IX92_00295 PF12833 Helix-turn-helix domain IX92_00300 PF08668 HDOD domain IX92_00310 PF02646 RmuC family IX92_00315 PF01209 ubiE/COQ5 methyltransferase family IX92_00320 PF02036 SCP-2 sterol transfer family IX92_00325 PF03109 ABC1 family IX92_00335 PF02416 mttA/Hcf106 family IX92_00340 PF00902 Sec-independent protein translocase protein (TatC) IX92_00345 PF01026 TatD related DNase IX92_00350 PF00490 Delta-aminolevulinic acid dehydratase IX92_00360 PF01612 3'-5' exonuclease IX92_00360 PF00476 DNA polymerase family A IX92_00360 PF01367 5'-3' exonuclease, C-terminal SAM fold IX92_00360 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IX92_00365 PF01926 50S ribosome-binding GTPase IX92_00370 PF00034 Cytochrome c IX92_00380 PF04220 Der GTPase activator (YihI) IX92_00385 PF10675 Protein of unknown function (DUF2489) IX92_00390 PF04055 Radical SAM superfamily IX92_00390 PF06969 HemN C-terminal domain IX92_00395 PF03466 LysR substrate binding domain IX92_00395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_00400 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IX92_00400 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IX92_00405 PF04380 Membrane fusogenic activity IX92_00410 PF00873 AcrB/AcrD/AcrF family IX92_00415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IX92_00420 PF00440 Bacterial regulatory proteins, tetR family IX92_00425 PF13361 UvrD-like helicase C-terminal domain IX92_00425 PF00580 UvrD/REP helicase N-terminal domain IX92_00430 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IX92_00460 PF00005 ABC transporter IX92_00460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX92_00465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX92_00475 PF12911 N-terminal TM domain of oligopeptide transport permease C IX92_00475 PF00528 Binding-protein-dependent transport system inner membrane component IX92_00490 PF00072 Response regulator receiver domain IX92_00490 PF00486 Transcriptional regulatory protein, C terminal IX92_00510 PF00083 Sugar (and other) transporter IX92_00520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IX92_00520 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX92_00525 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ IX92_00530 PF01432 Peptidase family M3 IX92_00545 PF05114 Protein of unknown function (DUF692) IX92_00555 PF00580 UvrD/REP helicase N-terminal domain IX92_00555 PF13361 UvrD-like helicase C-terminal domain IX92_00565 PF08534 Redoxin IX92_00575 PF01810 LysE type translocator IX92_00585 PF00892 EamA-like transporter family IX92_00590 PF00271 Helicase conserved C-terminal domain IX92_00590 PF00570 HRDC domain IX92_00590 PF16124 RecQ zinc-binding IX92_00590 PF09382 RQC domain IX92_00590 PF00270 DEAD/DEAH box helicase IX92_00600 PF02592 Putative vitamin uptake transporter IX92_00605 PF02541 Ppx/GppA phosphatase family IX92_00610 PF00270 DEAD/DEAH box helicase IX92_00610 PF00271 Helicase conserved C-terminal domain IX92_00615 PF00085 Thioredoxin IX92_00620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IX92_00620 PF07498 Rho termination factor, N-terminal domain IX92_00620 PF07497 Rho termination factor, RNA-binding domain IX92_00630 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase IX92_00635 PF00111 2Fe-2S iron-sulfur cluster binding domain IX92_00635 PF00970 Oxidoreductase FAD-binding domain IX92_00635 PF00175 Oxidoreductase NAD-binding domain IX92_00640 PF00175 Oxidoreductase NAD-binding domain IX92_00690 PF07219 HemY protein N-terminus IX92_00695 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase IX92_00700 PF02602 Uroporphyrinogen-III synthase HemD IX92_00710 PF01295 Adenylate cyclase, class-I IX92_00710 PF12633 Adenylate cyclase NT domain IX92_00715 PF01491 Frataxin-like domain IX92_00725 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IX92_00725 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IX92_00730 PF01678 Diaminopimelate epimerase IX92_00740 PF02899 Phage integrase, N-terminal SAM-like domain IX92_00740 PF00589 Phage integrase family IX92_00745 PF13419 Haloacid dehalogenase-like hydrolase IX92_00750 PF00563 EAL domain IX92_00750 PF10442 FIST C domain IX92_00750 PF08495 FIST N domain IX92_00750 PF00990 Diguanylate cyclase, GGDEF domain IX92_00780 PF01810 LysE type translocator IX92_00785 PF00563 EAL domain IX92_00785 PF08668 HDOD domain IX92_00790 PF01022 Bacterial regulatory protein, arsR family IX92_00795 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IX92_00795 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IX92_00840 PF01914 MarC family integral membrane protein IX92_00855 PF00448 SRP54-type protein, GTPase domain IX92_00855 PF02881 SRP54-type protein, helical bundle domain IX92_00860 PF00005 ABC transporter IX92_00865 PF18075 FtsX extracellular domain IX92_00870 PF04542 Sigma-70 region 2 IX92_00870 PF04545 Sigma-70, region 4 IX92_00870 PF00140 Sigma-70 factor, region 1.2 IX92_00875 PF00581 Rhodanese-like domain IX92_00880 PF01694 Rhomboid family IX92_00880 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease IX92_00885 PF03748 Flagellar basal body-associated protein FliL IX92_00890 PF04345 Chorismate lyase IX92_00895 PF01040 UbiA prenyltransferase family IX92_00900 PF01553 Acyltransferase IX92_00905 PF01219 Prokaryotic diacylglycerol kinase IX92_00910 PF00717 Peptidase S24-like IX92_00910 PF01726 LexA DNA binding domain IX92_00920 PF01554 MatE IX92_00925 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IX92_00925 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX92_00930 PF00440 Bacterial regulatory proteins, tetR family IX92_00940 PF05958 tRNA (Uracil-5-)-methyltransferase IX92_00945 PF07715 TonB-dependent Receptor Plug Domain IX92_00945 PF00593 TonB dependent receptor IX92_00955 PF01177 Asp/Glu/Hydantoin racemase IX92_01015 PF00999 Sodium/hydrogen exchanger family IX92_01020 PF02310 B12 binding domain IX92_01020 PF02965 Vitamin B12 dependent methionine synthase, activation domain IX92_01020 PF00809 Pterin binding enzyme IX92_01020 PF02574 Homocysteine S-methyltransferase IX92_01020 PF02607 B12 binding domain IX92_01025 PF03448 MgtE intracellular N domain IX92_01025 PF01769 Divalent cation transporter IX92_01025 PF00571 CBS domain IX92_01030 PF00381 PTS HPr component phosphorylation site IX92_01035 PF03668 P-loop ATPase protein family IX92_01040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IX92_01045 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IX92_01050 PF04552 Sigma-54, DNA binding domain IX92_01050 PF00309 Sigma-54 factor, Activator interacting domain (AID) IX92_01050 PF04963 Sigma-54 factor, core binding domain IX92_01055 PF00005 ABC transporter IX92_01055 PF12399 Branched-chain amino acid ATP-binding cassette transporter IX92_01060 PF03968 OstA-like protein IX92_01075 PF01380 SIS domain IX92_01075 PF00571 CBS domain IX92_01080 PF01699 Sodium/calcium exchanger protein IX92_01085 PF00005 ABC transporter IX92_01090 PF02405 Permease MlaE IX92_01095 PF02470 MlaD protein IX92_01100 PF05494 MlaC protein IX92_01110 PF01722 BolA-like protein IX92_01115 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IX92_01120 PF01553 Acyltransferase IX92_01130 PF06877 Regulator of ribonuclease activity B IX92_01145 PF00582 Universal stress protein family IX92_01155 PF16868 NMT1-like family IX92_01165 PF00056 lactate/malate dehydrogenase, NAD binding domain IX92_01165 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IX92_01175 PF01042 Endoribonuclease L-PSP IX92_01180 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain IX92_01180 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain IX92_01185 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IX92_01185 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IX92_01190 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IX92_01190 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IX92_01195 PF13638 PIN domain IX92_01195 PF02562 PhoH-like protein IX92_01200 PF00176 SNF2 family N-terminal domain IX92_01200 PF18337 RapA N-terminal Tudor like domain IX92_01200 PF00271 Helicase conserved C-terminal domain IX92_01200 PF12137 RNA polymerase recycling family C-terminal IX92_01200 PF18339 RapA N-terminal Tudor like domain 1 IX92_01210 PF00849 RNA pseudouridylate synthase IX92_01215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IX92_01215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IX92_01225 PF05987 Bacterial protein of unknown function (DUF898) IX92_01235 PF08264 Anticodon-binding domain of tRNA IX92_01235 PF10458 Valyl tRNA synthetase tRNA binding arm IX92_01235 PF00133 tRNA synthetases class I (I, L, M and V) IX92_01240 PF04364 DNA polymerase III chi subunit, HolC IX92_01245 PF00883 Cytosol aminopeptidase family, catalytic domain IX92_01245 PF02789 Cytosol aminopeptidase family, N-terminal domain IX92_01250 PF03739 Lipopolysaccharide export system permease LptF/LptG IX92_01255 PF03739 Lipopolysaccharide export system permease LptF/LptG IX92_01260 PF05188 MutS domain II IX92_01260 PF05192 MutS domain III IX92_01260 PF05190 MutS family domain IV IX92_01260 PF00488 MutS domain V IX92_01260 PF01624 MutS domain I IX92_01265 PF02464 Competence-damaged protein IX92_01270 PF00154 recA bacterial DNA recombination protein IX92_01275 PF02631 RecX family IX92_01280 PF02272 DHHA1 domain IX92_01280 PF01411 tRNA synthetases class II (A) IX92_01280 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IX92_01285 PF00696 Amino acid kinase family IX92_01285 PF01842 ACT domain IX92_01285 PF13840 ACT domain IX92_01290 PF02599 Global regulator protein family IX92_01335 PF04277 Oxaloacetate decarboxylase, gamma chain IX92_01340 PF00682 HMGL-like IX92_01340 PF02436 Conserved carboxylase domain IX92_01340 PF00364 Biotin-requiring enzyme IX92_01345 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit IX92_01350 PF16884 N-terminal domain of oxidoreductase IX92_01350 PF00107 Zinc-binding dehydrogenase IX92_01355 PF09335 SNARE associated Golgi protein IX92_01360 PF05193 Peptidase M16 inactive domain IX92_01360 PF00675 Insulinase (Peptidase family M16) IX92_01365 PF04262 Glutamate-cysteine ligase IX92_01375 PF02664 S-Ribosylhomocysteinase (LuxS) IX92_01390 PF13356 Arm DNA-binding domain IX92_01390 PF00589 Phage integrase family IX92_01425 PF00075 RNase H IX92_01450 PF03707 Bacterial signalling protein N terminal repeat IX92_01450 PF00563 EAL domain IX92_01450 PF00990 Diguanylate cyclase, GGDEF domain IX92_01455 PF00072 Response regulator receiver domain IX92_01455 PF00196 Bacterial regulatory proteins, luxR family IX92_01460 PF00360 Phytochrome region IX92_01460 PF00512 His Kinase A (phospho-acceptor) domain IX92_01460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_01460 PF01590 GAF domain IX92_01460 PF08446 PAS fold IX92_01485 PF00075 RNase H IX92_01525 PF04002 RadC-like JAB domain IX92_01535 PF12008 Type I restriction and modification enzyme - subunit R C terminal IX92_01535 PF18766 SWI2/SNF2 ATPase IX92_01535 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IX92_01550 PF02384 N-6 DNA Methylase IX92_01550 PF12161 HsdM N-terminal domain IX92_01560 PF00072 Response regulator receiver domain IX92_01610 PF00694 Aconitase C-terminal domain IX92_01615 PF00330 Aconitase family (aconitate hydratase) IX92_01620 PF00180 Isocitrate/isopropylmalate dehydrogenase IX92_01625 PF00682 HMGL-like IX92_01625 PF08502 LeuA allosteric (dimerisation) domain IX92_01645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_01645 PF03466 LysR substrate binding domain IX92_01650 PF00501 AMP-binding enzyme IX92_01655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IX92_01655 PF00205 Thiamine pyrophosphate enzyme, central domain IX92_01655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IX92_01660 PF10369 Small subunit of acetolactate synthase IX92_01665 PF03009 Glycerophosphoryl diester phosphodiesterase family IX92_01670 PF07690 Major Facilitator Superfamily IX92_01675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IX92_01675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IX92_01675 PF01842 ACT domain IX92_01680 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IX92_01685 PF01812 5-formyltetrahydrofolate cyclo-ligase family IX92_01690 PF05164 Cell division protein ZapA IX92_01700 PF01494 FAD binding domain IX92_01705 PF01494 FAD binding domain IX92_01725 PF03937 Flavinator of succinate dehydrogenase IX92_01735 PF02910 Fumarate reductase flavoprotein C-term IX92_01735 PF00890 FAD binding domain IX92_01740 PF08281 Sigma-70, region 4 IX92_01740 PF04542 Sigma-70 region 2 IX92_01745 PF03873 Anti sigma-E protein RseA, C-terminal domain IX92_01745 PF03872 Anti sigma-E protein RseA, N-terminal domain IX92_01750 PF03888 MucB/RseB N-terminal domain IX92_01750 PF17188 MucB/RseB C-terminal domain IX92_01760 PF00009 Elongation factor Tu GTP binding domain IX92_01760 PF00679 Elongation factor G C-terminus IX92_01760 PF06421 GTP-binding protein LepA C-terminus IX92_01760 PF03144 Elongation factor Tu domain 2 IX92_01765 PF10502 Signal peptidase, peptidase S26 IX92_01775 PF07650 KH domain IX92_01775 PF01926 50S ribosome-binding GTPase IX92_01780 PF02565 Recombination protein O C terminal IX92_01780 PF11967 Recombination protein O N terminal IX92_01785 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IX92_01790 PF01648 4'-phosphopantetheinyl transferase superfamily IX92_01795 PF00672 HAMP domain IX92_01795 PF00072 Response regulator receiver domain IX92_01795 PF01627 Hpt domain IX92_01795 PF00512 His Kinase A (phospho-acceptor) domain IX92_01795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_01795 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IX92_01800 PF01938 TRAM domain IX92_01800 PF05958 tRNA (Uracil-5-)-methyltransferase IX92_01805 PF13291 ACT domain IX92_01805 PF04607 Region found in RelA / SpoT proteins IX92_01805 PF02824 TGS domain IX92_01810 PF03819 MazG nucleotide pyrophosphohydrolase domain IX92_01815 PF00117 Glutamine amidotransferase class-I IX92_01815 PF06418 CTP synthase N-terminus IX92_01820 PF03952 Enolase, N-terminal domain IX92_01820 PF00113 Enolase, C-terminal TIM barrel domain IX92_01825 PF00113 Enolase, C-terminal TIM barrel domain IX92_01825 PF03952 Enolase, N-terminal domain IX92_01830 PF00113 Enolase, C-terminal TIM barrel domain IX92_01830 PF03952 Enolase, N-terminal domain IX92_01835 PF12627 Probable RNA and SrmB- binding site of polymerase A IX92_01835 PF01743 Poly A polymerase head domain IX92_01835 PF01966 HD domain IX92_01840 PF01471 Putative peptidoglycan binding domain IX92_01840 PF13401 AAA domain IX92_01845 PF16537 Type II secretion system protein B IX92_01850 PF08239 Bacterial SH3 domain IX92_01855 PF01384 Phosphate transporter family IX92_01860 PF01865 Protein of unknown function DUF47 IX92_01865 PF01928 CYTH domain IX92_01870 PF00027 Cyclic nucleotide-binding domain IX92_01870 PF07885 Ion channel IX92_01875 PF00672 HAMP domain IX92_01875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_01880 PF03710 Glutamate-ammonia ligase adenylyltransferase IX92_01880 PF08335 GlnD PII-uridylyltransferase IX92_01890 PF00486 Transcriptional regulatory protein, C terminal IX92_01890 PF00072 Response regulator receiver domain IX92_01900 PF03737 Aldolase/RraA IX92_01910 PF13840 ACT domain IX92_01910 PF00696 Amino acid kinase family IX92_01910 PF00742 Homoserine dehydrogenase IX92_01910 PF03447 Homoserine dehydrogenase, NAD binding domain IX92_01910 PF01842 ACT domain IX92_01915 PF08544 GHMP kinases C terminal IX92_01915 PF00288 GHMP kinases N terminal domain IX92_01920 PF00291 Pyridoxal-phosphate dependent enzyme IX92_01920 PF14821 Threonine synthase N terminus IX92_01925 PF03458 UPF0126 domain IX92_01930 PF01497 Periplasmic binding protein IX92_01935 PF03186 CobD/Cbib protein IX92_01940 PF01048 Phosphorylase superfamily IX92_01945 PF00312 Ribosomal protein S15 IX92_01950 PF00013 KH domain IX92_01950 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IX92_01950 PF01138 3' exoribonuclease family, domain 1 IX92_01950 PF03725 3' exoribonuclease family, domain 2 IX92_01950 PF00575 S1 RNA binding domain IX92_01955 PF13181 Tetratricopeptide repeat IX92_01955 PF07719 Tetratricopeptide repeat IX92_01960 PF01047 MarR family IX92_01965 PF01554 MatE IX92_01970 PF00072 Response regulator receiver domain IX92_01970 PF02954 Bacterial regulatory protein, Fis family IX92_01970 PF00158 Sigma-54 interaction domain IX92_01980 PF00248 Aldo/keto reductase family IX92_01990 PF02976 DNA mismatch repair enzyme MutH IX92_02000 PF01590 GAF domain IX92_02000 PF05524 PEP-utilising enzyme, N-terminal IX92_02000 PF00391 PEP-utilising enzyme, mobile domain IX92_02000 PF02896 PEP-utilising enzyme, TIM barrel domain IX92_02005 PF01925 Sulfite exporter TauE/SafE IX92_02015 PF00303 Thymidylate synthase IX92_02020 PF02690 Na+/Pi-cotransporter IX92_02030 PF03466 LysR substrate binding domain IX92_02030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_02035 PF01022 Bacterial regulatory protein, arsR family IX92_02040 PF01649 Ribosomal protein S20 IX92_02045 PF03023 Lipid II flippase MurJ IX92_02050 PF06574 FAD synthetase IX92_02050 PF01687 Riboflavin kinase IX92_02055 PF00133 tRNA synthetases class I (I, L, M and V) IX92_02055 PF08264 Anticodon-binding domain of tRNA IX92_02055 PF06827 Zinc finger found in FPG and IleRS IX92_02060 PF01252 Signal peptidase (SPase) II IX92_02065 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IX92_02070 PF02401 LytB protein IX92_02075 PF02554 Carbon starvation protein CstA IX92_02085 PF13580 SIS domain IX92_02090 PF03702 Anhydro-N-acetylmuramic acid kinase IX92_02105 PF01380 SIS domain IX92_02105 PF01418 Helix-turn-helix domain, rpiR family IX92_02110 PF00933 Glycosyl hydrolase family 3 N terminal domain IX92_02115 PF04397 LytTr DNA-binding domain IX92_02115 PF00072 Response regulator receiver domain IX92_02120 PF06580 Histidine kinase IX92_02120 PF07694 5TMR of 5TMR-LYT IX92_02125 PF00793 DAHP synthetase I family IX92_02130 PF02153 Prephenate dehydrogenase IX92_02130 PF01817 Chorismate mutase type II IX92_02135 PF01551 Peptidase family M23 IX92_02135 PF04225 Opacity-associated protein A LysM-like domain IX92_02140 PF07238 PilZ domain IX92_02145 PF12848 ABC transporter IX92_02145 PF00005 ABC transporter IX92_02150 PF14718 Soluble lytic murein transglycosylase L domain IX92_02150 PF01464 Transglycosylase SLT domain IX92_02155 PF01371 Trp repressor protein IX92_02160 PF01931 Protein of unknown function DUF84 IX92_02165 PF00990 Diguanylate cyclase, GGDEF domain IX92_02165 PF00563 EAL domain IX92_02170 PF13416 Bacterial extracellular solute-binding protein IX92_02175 PF01817 Chorismate mutase type II IX92_02175 PF00800 Prephenate dehydratase IX92_02180 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IX92_02185 PF01464 Transglycosylase SLT domain IX92_02190 PF13525 Outer membrane lipoprotein IX92_02195 PF00849 RNA pseudouridylate synthase IX92_02195 PF01479 S4 domain IX92_02205 PF10431 C-terminal, D2-small domain, of ClpB protein IX92_02205 PF02861 Clp amino terminal domain, pathogenicity island component IX92_02205 PF17871 AAA lid domain IX92_02205 PF07724 AAA domain (Cdc48 subfamily) IX92_02205 PF00004 ATPase family associated with various cellular activities (AAA) IX92_02245 PF00459 Inositol monophosphatase family IX92_02250 PF00588 SpoU rRNA Methylase family IX92_02255 PF02082 Transcriptional regulator IX92_02260 PF00266 Aminotransferase class-V IX92_02265 PF01592 NifU-like N terminal domain IX92_02270 PF01521 Iron-sulphur cluster biosynthesis IX92_02275 PF00226 DnaJ domain IX92_02275 PF07743 HSCB C-terminal oligomerisation domain IX92_02280 PF00012 Hsp70 protein IX92_02285 PF00111 2Fe-2S iron-sulfur cluster binding domain IX92_02290 PF04384 Iron-sulphur cluster assembly IX92_02295 PF12404 Peptidase IX92_02295 PF00883 Cytosol aminopeptidase family, catalytic domain IX92_02300 PF00334 Nucleoside diphosphate kinase IX92_02305 PF14492 Elongation Factor G, domain II IX92_02305 PF03144 Elongation factor Tu domain 2 IX92_02305 PF00009 Elongation factor Tu GTP binding domain IX92_02305 PF03764 Elongation factor G, domain IV IX92_02305 PF00679 Elongation factor G C-terminus IX92_02310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_02310 PF03466 LysR substrate binding domain IX92_02320 PF03466 LysR substrate binding domain IX92_02320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_02325 PF00501 AMP-binding enzyme IX92_02330 PF02805 Metal binding domain of Ada IX92_02330 PF12833 Helix-turn-helix domain IX92_02355 PF13629 Pilus formation protein N terminal region IX92_02355 PF04972 BON domain IX92_02355 PF00263 Bacterial type II and III secretion system protein IX92_02370 PF00437 Type II/IV secretion system protein IX92_02395 PF03466 LysR substrate binding domain IX92_02395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_02405 PF12833 Helix-turn-helix domain IX92_02410 PF02056 Family 4 glycosyl hydrolase IX92_02410 PF11975 Family 4 glycosyl hydrolase C-terminal domain IX92_02425 PF01204 Trehalase IX92_02435 PF12706 Beta-lactamase superfamily domain IX92_02445 PF13520 Amino acid permease IX92_02450 PF04074 YhcH/YjgK/YiaL IX92_02455 PF00703 Glycosyl hydrolases family 2 IX92_02455 PF16353 Domain of unknown function(DUF4981) IX92_02455 PF02929 Beta galactosidase small chain IX92_02455 PF02836 Glycosyl hydrolases family 2, TIM barrel domain IX92_02455 PF02837 Glycosyl hydrolases family 2, sugar binding domain IX92_02460 PF00356 Bacterial regulatory proteins, lacI family IX92_02465 PF16363 GDP-mannose 4,6 dehydratase IX92_02470 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain IX92_02470 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain IX92_02475 PF10509 Galactokinase galactose-binding signature IX92_02475 PF08544 GHMP kinases C terminal IX92_02475 PF00288 GHMP kinases N terminal domain IX92_02480 PF01263 Aldose 1-epimerase IX92_02485 PF00356 Bacterial regulatory proteins, lacI family IX92_02490 PF01588 Putative tRNA binding domain IX92_02500 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IX92_02500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IX92_02500 PF02378 Phosphotransferase system, EIIC IX92_02505 PF12833 Helix-turn-helix domain IX92_02515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IX92_02525 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle IX92_02525 PF14602 Hexapeptide repeat of succinyl-transferase IX92_02530 PF00578 AhpC/TSA family IX92_02530 PF10417 C-terminal domain of 1-Cys peroxiredoxin IX92_02535 PF03466 LysR substrate binding domain IX92_02535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_02540 PF01274 Malate synthase IX92_02545 PF00463 Isocitrate lyase family IX92_02550 PF00571 CBS domain IX92_02555 PF02547 Queuosine biosynthesis protein IX92_02560 PF01702 Queuine tRNA-ribosyltransferase IX92_02565 PF02699 Preprotein translocase subunit IX92_02570 PF02355 Protein export membrane protein IX92_02570 PF07549 SecD/SecF GG Motif IX92_02570 PF13721 SecD export protein N-terminal TM region IX92_02575 PF02355 Protein export membrane protein IX92_02575 PF07549 SecD/SecF GG Motif IX92_02590 PF03411 Penicillin-insensitive murein endopeptidase IX92_02595 PF12838 4Fe-4S dicluster domain IX92_02605 PF04381 Putative exonuclease, RdgC IX92_02610 PF00072 Response regulator receiver domain IX92_02610 PF00486 Transcriptional regulatory protein, C terminal IX92_02615 PF11808 Phosphate regulon sensor protein PhoR IX92_02615 PF00512 His Kinase A (phospho-acceptor) domain IX92_02615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_02615 PF00989 PAS fold IX92_02620 PF12849 PBP superfamily domain IX92_02625 PF02541 Ppx/GppA phosphatase family IX92_02630 PF13090 Polyphosphate kinase C-terminal domain 2 IX92_02630 PF02503 Polyphosphate kinase middle domain IX92_02630 PF17941 Polyphosphate kinase C-terminal domain 1 IX92_02630 PF13089 Polyphosphate kinase N-terminal domain IX92_02635 PF00528 Binding-protein-dependent transport system inner membrane component IX92_02640 PF00528 Binding-protein-dependent transport system inner membrane component IX92_02645 PF00005 ABC transporter IX92_02650 PF01895 PhoU domain IX92_02655 PF03976 Polyphosphate kinase 2 (PPK2) IX92_02660 PF03932 CutC family IX92_02665 PF07130 YebG protein IX92_02670 PF00440 Bacterial regulatory proteins, tetR family IX92_02675 PF00529 HlyD membrane-fusion protein of T1SS IX92_02675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IX92_02680 PF00873 AcrB/AcrD/AcrF family IX92_02685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_02685 PF03466 LysR substrate binding domain IX92_02695 PF17946 RecC C-terminal domain IX92_02700 PF12705 PD-(D/E)XK nuclease superfamily IX92_02700 PF13361 UvrD-like helicase C-terminal domain IX92_02700 PF00580 UvrD/REP helicase N-terminal domain IX92_02705 PF13538 UvrD-like helicase C-terminal domain IX92_02715 PF00583 Acetyltransferase (GNAT) family IX92_02715 PF00696 Amino acid kinase family IX92_02725 PF03562 MltA specific insert domain IX92_02725 PF06725 3D domain IX92_02730 PF00899 ThiF family IX92_02735 PF02657 Fe-S metabolism associated domain IX92_02740 PF04055 Radical SAM superfamily IX92_02745 PF13464 Domain of unknown function (DUF4115) IX92_02750 PF04551 GcpE protein IX92_02755 PF13393 Histidyl-tRNA synthetase IX92_02755 PF03129 Anticodon binding domain IX92_02760 PF09976 Tetratricopeptide repeat-like domain IX92_02765 PF13360 PQQ-like domain IX92_02770 PF01926 50S ribosome-binding GTPase IX92_02770 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IX92_02780 PF00990 Diguanylate cyclase, GGDEF domain IX92_02780 PF13185 GAF domain IX92_02790 PF13742 OB-fold nucleic acid binding domain IX92_02790 PF02601 Exonuclease VII, large subunit IX92_02795 PF00478 IMP dehydrogenase / GMP reductase domain IX92_02795 PF00571 CBS domain IX92_02800 PF00117 Glutamine amidotransferase class-I IX92_02800 PF00958 GMP synthase C terminal domain IX92_02800 PF02540 NAD synthase IX92_02805 PF00704 Glycosyl hydrolases family 18 IX92_02805 PF06483 Chitinase C IX92_02810 PF01184 GPR1/FUN34/yaaH family IX92_02815 PF01235 Sodium:alanine symporter family IX92_02820 PF01266 FAD dependent oxidoreductase IX92_02825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_02825 PF03466 LysR substrate binding domain IX92_02840 PF01053 Cys/Met metabolism PLP-dependent enzyme IX92_02845 PF01584 CheW-like domain IX92_02845 PF00072 Response regulator receiver domain IX92_02850 PF01553 Acyltransferase IX92_02870 PF02028 BCCT, betaine/carnitine/choline family transporter IX92_02875 PF00924 Mechanosensitive ion channel IX92_02880 PF13426 PAS domain IX92_02880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_02880 PF08447 PAS fold IX92_02915 PF00271 Helicase conserved C-terminal domain IX92_02915 PF00176 SNF2 family N-terminal domain IX92_02930 PF01555 DNA methylase IX92_02950 PF13356 Arm DNA-binding domain IX92_02950 PF00589 Phage integrase family IX92_02955 PF01668 SmpB protein IX92_02960 PF03364 Polyketide cyclase / dehydrase and lipid transport IX92_02965 PF03658 RnfH family Ubiquitin IX92_02970 PF04355 SmpA / OmlA family IX92_02975 PF02463 RecF/RecN/SMC N terminal domain IX92_02985 PF01025 GrpE IX92_02990 PF00375 Sodium:dicarboxylate symporter family IX92_02995 PF00012 Hsp70 protein IX92_03000 PF01556 DnaJ C terminal domain IX92_03000 PF00684 DnaJ central domain IX92_03000 PF00226 DnaJ domain IX92_03005 PF00114 Pilin (bacterial filament) IX92_03005 PF07963 Prokaryotic N-terminal methylation motif IX92_03010 PF07963 Prokaryotic N-terminal methylation motif IX92_03030 PF03806 AbgT putative transporter family IX92_03035 PF14437 MafB19-like deaminase IX92_03040 PF01464 Transglycosylase SLT domain IX92_03040 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX92_03045 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal IX92_03045 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IX92_03045 PF02769 AIR synthase related protein, C-terminal domain IX92_03060 PF06786 Uncharacterised protein family (UPF0253) IX92_03070 PF00551 Formyl transferase IX92_03075 PF02769 AIR synthase related protein, C-terminal domain IX92_03075 PF00586 AIR synthase related protein, N-terminal domain IX92_03085 PF01479 S4 domain IX92_03085 PF00849 RNA pseudouridylate synthase IX92_03090 PF01713 Smr domain IX92_03110 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain IX92_03110 PF00728 Glycosyl hydrolase family 20, catalytic domain IX92_03110 PF02838 Glycosyl hydrolase family 20, domain 2 IX92_03110 PF03173 Putative carbohydrate binding domain IX92_03115 PF00854 POT family IX92_03120 PF13537 Glutamine amidotransferase domain IX92_03120 PF00733 Asparagine synthase IX92_03125 PF02254 TrkA-N domain IX92_03125 PF00999 Sodium/hydrogen exchanger family IX92_03130 PF01047 MarR family IX92_03130 PF00480 ROK family IX92_03135 PF01979 Amidohydrolase family IX92_03140 PF02378 Phosphotransferase system, EIIC IX92_03140 PF00367 phosphotransferase system, EIIB IX92_03140 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IX92_03145 PF00749 tRNA synthetases class I (E and Q), catalytic domain IX92_03145 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IX92_03150 PF01475 Ferric uptake regulator family IX92_03160 PF00258 Flavodoxin IX92_03170 PF12697 Alpha/beta hydrolase family IX92_03175 PF03925 SeqA protein C-terminal domain IX92_03175 PF17206 SeqA protein N-terminal domain IX92_03180 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IX92_03180 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IX92_03180 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IX92_03180 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IX92_03190 PF01784 NIF3 (NGG1p interacting factor 3) IX92_03195 PF00285 Citrate synthase, C-terminal domain IX92_03200 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IX92_03205 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IX92_03210 PF00890 FAD binding domain IX92_03210 PF02910 Fumarate reductase flavoprotein C-term IX92_03215 PF13085 2Fe-2S iron-sulfur cluster binding domain IX92_03220 PF00676 Dehydrogenase E1 component IX92_03220 PF16078 2-oxoglutarate dehydrogenase N-terminus IX92_03220 PF02779 Transketolase, pyrimidine binding domain IX92_03220 PF16870 2-oxoglutarate dehydrogenase C-terminal IX92_03225 PF02817 e3 binding domain IX92_03225 PF00364 Biotin-requiring enzyme IX92_03225 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IX92_03230 PF08442 ATP-grasp domain IX92_03230 PF00549 CoA-ligase IX92_03235 PF02629 CoA binding domain IX92_03235 PF00549 CoA-ligase IX92_03260 PF04287 tRNA pseudouridine synthase C IX92_03265 PF00849 RNA pseudouridylate synthase IX92_03270 PF02779 Transketolase, pyrimidine binding domain IX92_03270 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IX92_03270 PF02780 Transketolase, C-terminal domain IX92_03275 PF00348 Polyprenyl synthetase IX92_03285 PF01618 MotA/TolQ/ExbB proton channel family IX92_03290 PF00691 OmpA family IX92_03290 PF13677 Membrane MotB of proton-channel complex MotA/MotB IX92_03295 PF02568 Thiamine biosynthesis protein (ThiI) IX92_03295 PF02926 THUMP domain IX92_03300 PF03466 LysR substrate binding domain IX92_03300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_03320 PF01223 DNA/RNA non-specific endonuclease IX92_03325 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IX92_03325 PF01367 5'-3' exonuclease, C-terminal SAM fold IX92_03330 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases IX92_03330 PF11892 Domain of unknown function (DUF3412) IX92_03330 PF03641 Possible lysine decarboxylase IX92_03335 PF00072 Response regulator receiver domain IX92_03335 PF00990 Diguanylate cyclase, GGDEF domain IX92_03345 PF14489 QueF-like protein IX92_03345 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term IX92_03350 PF07348 Syd protein (SUKH-2) IX92_03355 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) IX92_03365 PF01546 Peptidase family M20/M25/M40 IX92_03365 PF07687 Peptidase dimerisation domain IX92_03370 PF03960 ArsC family IX92_03395 PF02335 Cytochrome c552 IX92_03405 PF13247 4Fe-4S dicluster domain IX92_03405 PF00037 4Fe-4S binding domain IX92_03410 PF03916 Polysulphide reductase, NrfD IX92_03415 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IX92_03415 PF01578 Cytochrome C assembly protein IX92_03420 PF08534 Redoxin IX92_03425 PF03918 Cytochrome C biogenesis protein IX92_03430 PF11143 Protein of unknown function (DUF2919) IX92_03435 PF04261 Dyp-type peroxidase family IX92_03440 PF00669 Bacterial flagellin N-terminal helical region IX92_03440 PF07196 Flagellin hook IN motif IX92_03440 PF00700 Bacterial flagellin C-terminal helical region IX92_03445 PF00669 Bacterial flagellin N-terminal helical region IX92_03445 PF07196 Flagellin hook IN motif IX92_03445 PF00700 Bacterial flagellin C-terminal helical region IX92_03455 PF00700 Bacterial flagellin C-terminal helical region IX92_03455 PF07196 Flagellin hook IN motif IX92_03455 PF00669 Bacterial flagellin N-terminal helical region IX92_03460 PF03646 FlaG protein IX92_03465 PF07196 Flagellin hook IN motif IX92_03465 PF07195 Flagellar hook-associated protein 2 C-terminus IX92_03465 PF02465 Flagellar hook-associated protein 2 N-terminus IX92_03475 PF02561 Flagellar protein FliS IX92_03480 PF00072 Response regulator receiver domain IX92_03480 PF02954 Bacterial regulatory protein, Fis family IX92_03480 PF00158 Sigma-54 interaction domain IX92_03485 PF00512 His Kinase A (phospho-acceptor) domain IX92_03485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_03490 PF00072 Response regulator receiver domain IX92_03490 PF00158 Sigma-54 interaction domain IX92_03490 PF02954 Bacterial regulatory protein, Fis family IX92_03495 PF02049 Flagellar hook-basal body complex protein FliE IX92_03500 PF01514 Secretory protein of YscJ/FliF family IX92_03500 PF08345 Flagellar M-ring protein C-terminal IX92_03505 PF14842 FliG N-terminal domain IX92_03505 PF01706 FliG C-terminal domain IX92_03505 PF14841 FliG middle domain IX92_03515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IX92_03515 PF18269 T3SS EscN ATPase C-terminal domain IX92_03535 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IX92_03535 PF02154 Flagellar motor switch protein FliM IX92_03540 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IX92_03545 PF04347 Flagellar biosynthesis protein, FliO IX92_03550 PF00813 FliP family IX92_03555 PF01313 Bacterial export proteins, family 3 IX92_03560 PF01311 Bacterial export proteins, family 1 IX92_03565 PF01312 FlhB HrpN YscU SpaS Family IX92_03570 PF01713 Smr domain IX92_03575 PF05175 Methyltransferase small domain IX92_03580 PF01264 Chorismate synthase IX92_03590 PF03458 UPF0126 domain IX92_03595 PF04315 Elongation factor P hydroxylase IX92_03610 PF08891 YfcL protein IX92_03615 PF03358 NADPH-dependent FMN reductase IX92_03620 PF01266 FAD dependent oxidoreductase IX92_03620 PF05430 S-adenosyl-L-methionine-dependent methyltransferase IX92_03625 PF00109 Beta-ketoacyl synthase, N-terminal domain IX92_03625 PF02801 Beta-ketoacyl synthase, C-terminal domain IX92_03630 PF11890 Domain of unknown function (DUF3410) IX92_03630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IX92_03630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IX92_03635 PF02774 Semialdehyde dehydrogenase, dimerisation domain IX92_03635 PF01118 Semialdehyde dehydrogenase, NAD binding domain IX92_03645 PF01416 tRNA pseudouridine synthase IX92_03650 PF17848 Acetyl-coA carboxylase zinc finger domain IX92_03650 PF01039 Carboxyl transferase domain IX92_03655 PF08245 Mur ligase middle domain IX92_03655 PF02875 Mur ligase family, glutamate ligase domain IX92_03660 PF05036 Sporulation related domain IX92_03665 PF02674 Colicin V production protein IX92_03670 PF00156 Phosphoribosyl transferase domain IX92_03675 PF00950 ABC 3 transport family IX92_03680 PF00005 ABC transporter IX92_03685 PF01297 Zinc-uptake complex component A periplasmic IX92_03690 PF02311 AraC-like ligand binding domain IX92_03690 PF12833 Helix-turn-helix domain IX92_03695 PF04023 FeoA domain IX92_03700 PF07670 Nucleoside recognition IX92_03700 PF02421 Ferrous iron transport protein B IX92_03700 PF07664 Ferrous iron transport protein B C terminus IX92_03715 PF03485 Arginyl tRNA synthetase N terminal domain IX92_03715 PF00750 tRNA synthetases class I (R) IX92_03715 PF05746 DALR anticodon binding domain IX92_03720 PF06185 YecM protein IX92_03725 PF00675 Insulinase (Peptidase family M16) IX92_03725 PF05193 Peptidase M16 inactive domain IX92_03730 PF00300 Histidine phosphatase superfamily (branch 1) IX92_03735 PF00771 FHIPEP family IX92_03740 PF00448 SRP54-type protein, GTPase domain IX92_03745 PF10609 NUBPL iron-transfer P-loop NTPase IX92_03750 PF04545 Sigma-70, region 4 IX92_03750 PF04539 Sigma-70 region 3 IX92_03750 PF04542 Sigma-70 region 2 IX92_03755 PF00072 Response regulator receiver domain IX92_03760 PF04344 Chemotaxis phosphatase, CheZ IX92_03765 PF01627 Hpt domain IX92_03765 PF01584 CheW-like domain IX92_03765 PF02895 Signal transducing histidine kinase, homodimeric domain IX92_03765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_03765 PF07194 P2 response regulator binding domain IX92_03770 PF00072 Response regulator receiver domain IX92_03770 PF01339 CheB methylesterase IX92_03775 PF13614 AAA domain IX92_03785 PF01584 CheW-like domain IX92_03795 PF00005 ABC transporter IX92_03800 PF03379 CcmB protein IX92_03805 PF01578 Cytochrome C assembly protein IX92_03810 PF04995 Heme exporter protein D (CcmD) IX92_03815 PF03100 CcmE IX92_03820 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IX92_03820 PF01578 Cytochrome C assembly protein IX92_03825 PF08534 Redoxin IX92_03830 PF03918 Cytochrome C biogenesis protein IX92_03835 PF03918 Cytochrome C biogenesis protein IX92_03840 PF04333 MlaA lipoprotein IX92_03845 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) IX92_03850 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) IX92_03860 PF08281 Sigma-70, region 4 IX92_03860 PF04542 Sigma-70 region 2 IX92_03865 PF00108 Thiolase, N-terminal domain IX92_03865 PF02803 Thiolase, C-terminal domain IX92_03870 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IX92_03870 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IX92_03870 PF00378 Enoyl-CoA hydratase/isomerase IX92_03875 PF00881 Nitroreductase family IX92_03880 PF03466 LysR substrate binding domain IX92_03880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_03885 PF00072 Response regulator receiver domain IX92_03895 PF04304 Protein of unknown function (DUF454) IX92_03900 PF00156 Phosphoribosyl transferase domain IX92_03905 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding IX92_03905 PF12170 DNA polymerase III tau subunit V interacting with alpha IX92_03905 PF12169 DNA polymerase III subunits gamma and tau domain III IX92_03910 PF02575 YbaB/EbfC DNA-binding family IX92_03915 PF13662 Toprim domain IX92_03915 PF02132 RecR protein IX92_03920 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IX92_03920 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IX92_03935 PF02696 Uncharacterized ACR, YdiU/UPF0061 family IX92_03940 PF00072 Response regulator receiver domain IX92_03940 PF00486 Transcriptional regulatory protein, C terminal IX92_03945 PF00672 HAMP domain IX92_03945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_03945 PF00512 His Kinase A (phospho-acceptor) domain IX92_03950 PF01547 Bacterial extracellular solute-binding protein IX92_03960 PF00528 Binding-protein-dependent transport system inner membrane component IX92_03965 PF03459 TOBE domain IX92_03965 PF17912 MalK OB fold domain IX92_03965 PF00005 ABC transporter IX92_03970 PF03480 Bacterial extracellular solute-binding protein, family 7 IX92_03975 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IX92_03980 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IX92_03990 PF02954 Bacterial regulatory protein, Fis family IX92_03990 PF00158 Sigma-54 interaction domain IX92_03990 PF00072 Response regulator receiver domain IX92_03995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_03995 PF02743 Cache domain IX92_03995 PF00512 His Kinase A (phospho-acceptor) domain IX92_04000 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IX92_04000 PF05698 Bacterial trigger factor protein (TF) C-terminus IX92_04000 PF05697 Bacterial trigger factor protein (TF) IX92_04005 PF00574 Clp protease IX92_04010 PF07724 AAA domain (Cdc48 subfamily) IX92_04010 PF10431 C-terminal, D2-small domain, of ClpB protein IX92_04010 PF06689 ClpX C4-type zinc finger IX92_04015 PF00004 ATPase family associated with various cellular activities (AAA) IX92_04015 PF05362 Lon protease (S16) C-terminal proteolytic domain IX92_04015 PF02190 ATP-dependent protease La (LON) substrate-binding domain IX92_04020 PF00216 Bacterial DNA-binding protein IX92_04025 PF13145 PPIC-type PPIASE domain IX92_04035 PF02224 Cytidylate kinase IX92_04040 PF00575 S1 RNA binding domain IX92_04045 PF00216 Bacterial DNA-binding protein IX92_04050 PF06305 Lipopolysaccharide assembly protein A domain IX92_04055 PF18073 Rubredoxin metal binding domain IX92_04060 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IX92_04070 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) IX92_04080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_04080 PF03466 LysR substrate binding domain IX92_04095 PF02653 Branched-chain amino acid transport system / permease component IX92_04100 PF00005 ABC transporter IX92_04105 PF05230 MASE2 domain IX92_04105 PF00990 Diguanylate cyclase, GGDEF domain IX92_04110 PF01207 Dihydrouridine synthase (Dus) IX92_04120 PF07517 SecA DEAD-like domain IX92_04120 PF02810 SEC-C motif IX92_04120 PF01043 SecA preprotein cross-linking domain IX92_04120 PF07516 SecA Wing and Scaffold domain IX92_04125 PF03548 Outer membrane lipoprotein carrier protein LolA IX92_04130 PF12002 MgsA AAA+ ATPase C terminal IX92_04130 PF16193 AAA C-terminal domain IX92_04130 PF00004 ATPase family associated with various cellular activities (AAA) IX92_04135 PF02403 Seryl-tRNA synthetase N-terminal domain IX92_04135 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IX92_04145 PF00710 Asparaginase, N-terminal IX92_04145 PF17763 Glutaminase/Asparaginase C-terminal domain IX92_04150 PF01343 Peptidase family S49 IX92_04155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IX92_04155 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX92_04160 PF00551 Formyl transferase IX92_04160 PF01842 ACT domain IX92_04170 PF13307 Helicase C-terminal domain IX92_04170 PF04851 Type III restriction enzyme, res subunit IX92_04175 PF00814 Glycoprotease family IX92_04190 PF00561 alpha/beta hydrolase fold IX92_04195 PF00501 AMP-binding enzyme IX92_04195 PF13193 AMP-binding enzyme C-terminal domain IX92_04200 PF01612 3'-5' exonuclease IX92_04200 PF00570 HRDC domain IX92_04205 PF00916 Sulfate permease family IX92_04205 PF01740 STAS domain IX92_04210 PF00575 S1 RNA binding domain IX92_04210 PF12111 Polyribonucleotide phosphorylase C terminal IX92_04210 PF10150 Ribonuclease E/G family IX92_04215 PF01479 S4 domain IX92_04215 PF00849 RNA pseudouridylate synthase IX92_04220 PF02545 Maf-like protein IX92_04225 PF02620 Large ribosomal RNA subunit accumulation protein YceD IX92_04235 PF02504 Fatty acid synthesis protein IX92_04240 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IX92_04240 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IX92_04245 PF00698 Acyl transferase domain IX92_04255 PF00550 Phosphopantetheine attachment site IX92_04260 PF02801 Beta-ketoacyl synthase, C-terminal domain IX92_04260 PF00109 Beta-ketoacyl synthase, N-terminal domain IX92_04265 PF01063 Amino-transferase class IV IX92_04270 PF02618 YceG-like family IX92_04275 PF02223 Thymidylate kinase IX92_04280 PF09115 DNA polymerase III, delta subunit, C terminal IX92_04285 PF01026 TatD related DNase IX92_04290 PF02378 Phosphotransferase system, EIIC IX92_04290 PF00367 phosphotransferase system, EIIB IX92_04300 PF00209 Sodium:neurotransmitter symporter family IX92_04315 PF01734 Patatin-like phospholipase IX92_04320 PF02887 Pyruvate kinase, alpha/beta domain IX92_04320 PF00224 Pyruvate kinase, barrel domain IX92_04325 PF00480 ROK family IX92_04330 PF01584 CheW-like domain IX92_04330 PF00072 Response regulator receiver domain IX92_04335 PF01336 OB-fold nucleic acid binding domain IX92_04335 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IX92_04335 PF07733 Bacterial DNA polymerase III alpha NTPase domain IX92_04335 PF14579 Helix-hairpin-helix motif IX92_04335 PF02811 PHP domain IX92_04350 PF00106 short chain dehydrogenase IX92_04355 PF01343 Peptidase family S49 IX92_04355 PF08496 Peptidase family S49 N-terminal IX92_04360 PF00271 Helicase conserved C-terminal domain IX92_04360 PF00270 DEAD/DEAH box helicase IX92_04375 PF00962 Adenosine/AMP deaminase IX92_04380 PF13286 Phosphohydrolase-associated domain IX92_04380 PF01966 HD domain IX92_04390 PF00704 Glycosyl hydrolases family 18 IX92_04400 PF00155 Aminotransferase class I and II IX92_04405 PF00425 chorismate binding enzyme IX92_04410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IX92_04410 PF16582 Middle domain of thiamine pyrophosphate IX92_04410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IX92_04415 PF12697 Alpha/beta hydrolase family IX92_04420 PF00378 Enoyl-CoA hydratase/isomerase IX92_04425 PF13378 Enolase C-terminal domain-like IX92_04430 PF13193 AMP-binding enzyme C-terminal domain IX92_04430 PF00501 AMP-binding enzyme IX92_04435 PF03601 Conserved hypothetical protein 698 IX92_04440 PF07690 Major Facilitator Superfamily IX92_04460 PF00291 Pyridoxal-phosphate dependent enzyme IX92_04465 PF13404 AsnC-type helix-turn-helix domain IX92_04465 PF01037 Lrp/AsnC ligand binding domain IX92_04485 PF09619 Type III secretion system lipoprotein chaperone (YscW) IX92_04490 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IX92_04500 PF00990 Diguanylate cyclase, GGDEF domain IX92_04500 PF05230 MASE2 domain IX92_04520 PF01614 Bacterial transcriptional regulator IX92_04520 PF09339 IclR helix-turn-helix domain IX92_04525 PF01515 Phosphate acetyl/butaryl transferase IX92_04530 PF01925 Sulfite exporter TauE/SafE IX92_04535 PF06213 Cobalamin biosynthesis protein CobT IX92_04535 PF11775 Cobalamin biosynthesis protein CobT VWA domain IX92_04540 PF07728 AAA domain (dynein-related subfamily) IX92_04540 PF08406 CbbQ/NirQ/NorQ C-terminal IX92_04540 PF12556 Cobaltochelatase CobS subunit N terminal IX92_04545 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IX92_04545 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IX92_04545 PF00205 Thiamine pyrophosphate enzyme, central domain IX92_04550 PF03601 Conserved hypothetical protein 698 IX92_04565 PF01266 FAD dependent oxidoreductase IX92_04570 PF03480 Bacterial extracellular solute-binding protein, family 7 IX92_04575 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IX92_04580 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IX92_04595 PF00933 Glycosyl hydrolase family 3 N terminal domain IX92_04595 PF01915 Glycosyl hydrolase family 3 C-terminal domain IX92_04600 PF07075 Protein of unknown function (DUF1343) IX92_04605 PF02350 UDP-N-acetylglucosamine 2-epimerase IX92_04610 PF13632 Glycosyl transferase family group 2 IX92_04610 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IX92_04625 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading IX92_04625 PF18416 N-acetylglucosamine binding protein domain 2 IX92_04630 PF00326 Prolyl oligopeptidase family IX92_04630 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IX92_04640 PF02868 Thermolysin metallopeptidase, alpha-helical domain IX92_04640 PF01447 Thermolysin metallopeptidase, catalytic domain IX92_04640 PF07504 Fungalysin/Thermolysin Propeptide Motif IX92_04640 PF04151 Bacterial pre-peptidase C-terminal domain IX92_04640 PF03413 Peptidase propeptide and YPEB domain IX92_04650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IX92_04660 PF02687 FtsX-like permease family IX92_04660 PF12704 MacB-like periplasmic core domain IX92_04665 PF12704 MacB-like periplasmic core domain IX92_04665 PF00005 ABC transporter IX92_04665 PF02687 FtsX-like permease family IX92_04670 PF02687 FtsX-like permease family IX92_04670 PF12704 MacB-like periplasmic core domain IX92_04670 PF00005 ABC transporter IX92_04690 PF16200 C-terminal region of band_7 IX92_04690 PF01145 SPFH domain / Band 7 family IX92_04700 PF00672 HAMP domain IX92_04700 PF02743 Cache domain IX92_04700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_04705 PF05922 Peptidase inhibitor I9 IX92_04705 PF00082 Subtilase family IX92_04705 PF04151 Bacterial pre-peptidase C-terminal domain IX92_04710 PF04389 Peptidase family M28 IX92_04710 PF04151 Bacterial pre-peptidase C-terminal domain IX92_04715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_04715 PF00672 HAMP domain IX92_04715 PF02743 Cache domain IX92_04730 PF00990 Diguanylate cyclase, GGDEF domain IX92_04730 PF17158 Membrane-associated sensor, integral membrane domain IX92_04735 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) IX92_04745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX92_04750 PF00528 Binding-protein-dependent transport system inner membrane component IX92_04755 PF12911 N-terminal TM domain of oligopeptide transport permease C IX92_04755 PF00528 Binding-protein-dependent transport system inner membrane component IX92_04760 PF00005 ABC transporter IX92_04760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX92_04765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX92_04765 PF00005 ABC transporter IX92_04770 PF13409 Glutathione S-transferase, N-terminal domain IX92_04775 PF17151 Periplasmic sensor domain IX92_04775 PF00990 Diguanylate cyclase, GGDEF domain IX92_04780 PF07085 DRTGG domain IX92_04780 PF01515 Phosphate acetyl/butaryl transferase IX92_04785 PF00871 Acetokinase family IX92_04790 PF04217 Protein of unknown function, DUF412 IX92_04795 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IX92_04795 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IX92_04800 PF01037 Lrp/AsnC ligand binding domain IX92_04805 PF17854 FtsK alpha domain IX92_04805 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IX92_04805 PF01580 FtsK/SpoIIIE family IX92_04805 PF09397 Ftsk gamma domain IX92_04810 PF02600 Disulfide bond formation protein DsbB IX92_04815 PF06450 Bacterial Na+/H+ antiporter B (NhaB) IX92_04820 PF00392 Bacterial regulatory proteins, gntR family IX92_04820 PF07840 FadR C-terminal domain IX92_04830 PF00672 HAMP domain IX92_04830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_04835 PF01230 HIT domain IX92_04850 PF08139 Prokaryotic membrane lipoprotein lipid attachment site IX92_04850 PF13036 Peptidoglycan-synthase activator LpoB IX92_04860 PF05728 Uncharacterised protein family (UPF0227) IX92_04865 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX92_04885 PF17757 UvrB interaction domain IX92_04885 PF00271 Helicase conserved C-terminal domain IX92_04885 PF03461 TRCF domain IX92_04885 PF02559 CarD-like/TRCF domain IX92_04885 PF00270 DEAD/DEAH box helicase IX92_04895 PF02687 FtsX-like permease family IX92_04895 PF12704 MacB-like periplasmic core domain IX92_04900 PF00005 ABC transporter IX92_04905 PF12704 MacB-like periplasmic core domain IX92_04905 PF02687 FtsX-like permease family IX92_04915 PF03772 Competence protein IX92_04915 PF00753 Metallo-beta-lactamase superfamily IX92_04920 PF00664 ABC transporter transmembrane region IX92_04920 PF00005 ABC transporter IX92_04925 PF02606 Tetraacyldisaccharide-1-P 4'-kinase IX92_04930 PF03966 Trm112p-like protein IX92_04935 PF02348 Cytidylyltransferase IX92_04940 PF04293 SpoVR like protein IX92_04945 PF04285 Protein of unknown function (DUF444) IX92_04950 PF08298 PrkA AAA domain IX92_04950 PF06798 PrkA serine protein kinase C-terminal domain IX92_04955 PF06629 MltA-interacting protein MipA IX92_04970 PF04055 Radical SAM superfamily IX92_04975 PF00672 HAMP domain IX92_04975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_04985 PF01228 Glycine radical IX92_04985 PF02901 Pyruvate formate lyase-like IX92_04995 PF00005 ABC transporter IX92_05000 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX92_05005 PF00528 Binding-protein-dependent transport system inner membrane component IX92_05010 PF00528 Binding-protein-dependent transport system inner membrane component IX92_05015 PF06826 Predicted Permease Membrane Region IX92_05015 PF02080 TrkA-C domain IX92_05020 PF00462 Glutaredoxin IX92_05025 PF00171 Aldehyde dehydrogenase family IX92_05025 PF00465 Iron-containing alcohol dehydrogenase IX92_05030 PF01380 SIS domain IX92_05030 PF01418 Helix-turn-helix domain, rpiR family IX92_05035 PF00282 Pyridoxal-dependent decarboxylase conserved domain IX92_05045 PF03956 Lysine exporter LysO IX92_05055 PF04994 TfoX C-terminal domain IX92_05055 PF04993 TfoX N-terminal domain IX92_05070 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX92_05070 PF00512 His Kinase A (phospho-acceptor) domain IX92_05070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_05080 PF00266 Aminotransferase class-V IX92_05085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_05085 PF12729 Four helix bundle sensory module for signal transduction IX92_05085 PF00672 HAMP domain IX92_05090 PF04055 Radical SAM superfamily IX92_05090 PF08497 Radical SAM N-terminal IX92_05090 PF11842 Domain of unknown function (DUF3362) IX92_05095 PF03707 Bacterial signalling protein N terminal repeat IX92_05095 PF00990 Diguanylate cyclase, GGDEF domain IX92_05095 PF00563 EAL domain IX92_05115 PF01717 Cobalamin-independent synthase, Catalytic domain IX92_05115 PF08267 Cobalamin-independent synthase, N-terminal domain IX92_05120 PF02566 OsmC-like protein IX92_05125 PF01047 MarR family IX92_05135 PF03466 LysR substrate binding domain IX92_05135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_05145 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IX92_05145 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IX92_05150 PF01323 DSBA-like thioredoxin domain IX92_05170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_05170 PF00672 HAMP domain IX92_05170 PF02743 Cache domain IX92_05175 PF02627 Carboxymuconolactone decarboxylase family IX92_05190 PF05656 Protein of unknown function (DUF805) IX92_05200 PF04116 Fatty acid hydroxylase superfamily IX92_05210 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IX92_05210 PF12833 Helix-turn-helix domain IX92_05235 PF00034 Cytochrome c IX92_05235 PF03150 Di-haem cytochrome c peroxidase IX92_05245 PF00012 Hsp70 protein IX92_05250 PF00012 Hsp70 protein IX92_05290 PF00270 DEAD/DEAH box helicase IX92_05290 PF04408 Helicase associated domain (HA2) IX92_05290 PF00271 Helicase conserved C-terminal domain IX92_05290 PF11898 Domain of unknown function (DUF3418) IX92_05290 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IX92_05300 PF00375 Sodium:dicarboxylate symporter family IX92_05305 PF00290 Tryptophan synthase alpha chain IX92_05310 PF00291 Pyridoxal-phosphate dependent enzyme IX92_05315 PF00218 Indole-3-glycerol phosphate synthase IX92_05315 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IX92_05320 PF02885 Glycosyl transferase family, helical bundle domain IX92_05320 PF00591 Glycosyl transferase family, a/b domain IX92_05325 PF00117 Glutamine amidotransferase class-I IX92_05330 PF00425 chorismate binding enzyme IX92_05330 PF04715 Anthranilate synthase component I, N terminal region IX92_05335 PF08056 Tryptophan operon leader peptide IX92_05340 PF02811 PHP domain IX92_05345 PF01300 Telomere recombination IX92_05355 PF00990 Diguanylate cyclase, GGDEF domain IX92_05355 PF00563 EAL domain IX92_05355 PF03707 Bacterial signalling protein N terminal repeat IX92_05360 PF00849 RNA pseudouridylate synthase IX92_05360 PF01479 S4 domain IX92_05365 PF02567 Phenazine biosynthesis-like protein IX92_05370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_05370 PF03466 LysR substrate binding domain IX92_05375 PF07690 Major Facilitator Superfamily IX92_05380 PF00005 ABC transporter IX92_05380 PF00664 ABC transporter transmembrane region IX92_05385 PF00005 ABC transporter IX92_05385 PF00664 ABC transporter transmembrane region IX92_05390 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX92_05400 PF00266 Aminotransferase class-V IX92_05405 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IX92_05420 PF00675 Insulinase (Peptidase family M16) IX92_05420 PF05193 Peptidase M16 inactive domain IX92_05430 PF02698 DUF218 domain IX92_05440 PF00390 Malic enzyme, N-terminal domain IX92_05440 PF03949 Malic enzyme, NAD binding domain IX92_05445 PF04408 Helicase associated domain (HA2) IX92_05445 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IX92_05445 PF00270 DEAD/DEAH box helicase IX92_05445 PF00271 Helicase conserved C-terminal domain IX92_05445 PF11898 Domain of unknown function (DUF3418) IX92_05460 PF00155 Aminotransferase class I and II IX92_05465 PF00672 HAMP domain IX92_05465 PF01966 HD domain IX92_05475 PF00392 Bacterial regulatory proteins, gntR family IX92_05475 PF00155 Aminotransferase class I and II IX92_05485 PF00152 tRNA synthetases class II (D, K and N) IX92_05485 PF01336 OB-fold nucleic acid binding domain IX92_05490 PF02743 Cache domain IX92_05490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_05490 PF00672 HAMP domain IX92_05500 PF03222 Tryptophan/tyrosine permease family IX92_05505 PF00563 EAL domain IX92_05505 PF03707 Bacterial signalling protein N terminal repeat IX92_05505 PF00990 Diguanylate cyclase, GGDEF domain IX92_05510 PF03313 Serine dehydratase alpha chain IX92_05510 PF03315 Serine dehydratase beta chain IX92_05515 PF03222 Tryptophan/tyrosine permease family IX92_05520 PF00293 NUDIX domain IX92_05530 PF09308 LuxQ, periplasmic IX92_05530 PF00072 Response regulator receiver domain IX92_05530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_05530 PF00512 His Kinase A (phospho-acceptor) domain IX92_05535 PF00425 chorismate binding enzyme IX92_05535 PF04715 Anthranilate synthase component I, N terminal region IX92_05550 PF04317 YcjX-like family, DUF463 IX92_05555 PF05128 Domain of unknown function (DUF697) IX92_05560 PF00158 Sigma-54 interaction domain IX92_05560 PF18024 Helix-turn-helix domain IX92_05565 PF13302 Acetyltransferase (GNAT) domain IX92_05585 PF00990 Diguanylate cyclase, GGDEF domain IX92_05595 PF00925 GTP cyclohydrolase II IX92_05620 PF01471 Putative peptidoglycan binding domain IX92_05620 PF03734 L,D-transpeptidase catalytic domain IX92_05625 PF05951 Bacterial protein of unknown function (DUF882) IX92_05630 PF00753 Metallo-beta-lactamase superfamily IX92_05645 PF03480 Bacterial extracellular solute-binding protein, family 7 IX92_05655 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IX92_05660 PF07730 Histidine kinase IX92_05660 PF17200 Single Cache domain 2 IX92_05665 PF00072 Response regulator receiver domain IX92_05665 PF00196 Bacterial regulatory proteins, luxR family IX92_05675 PF02743 Cache domain IX92_05675 PF00672 HAMP domain IX92_05675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_05680 PF01734 Patatin-like phospholipase IX92_05685 PF00210 Ferritin-like domain IX92_05695 PF13520 Amino acid permease IX92_05700 PF00892 EamA-like transporter family IX92_05710 PF00877 NlpC/P60 family IX92_05790 PF00588 SpoU rRNA Methylase family IX92_05790 PF04705 Thiostrepton-resistance methylase, N terminus IX92_05815 PF13286 Phosphohydrolase-associated domain IX92_05815 PF01966 HD domain IX92_05900 PF09905 DNA-binding protein VF530 IX92_05910 PF00583 Acetyltransferase (GNAT) family IX92_05920 PF01717 Cobalamin-independent synthase, Catalytic domain IX92_05920 PF08267 Cobalamin-independent synthase, N-terminal domain IX92_05930 PF01925 Sulfite exporter TauE/SafE IX92_05935 PF00583 Acetyltransferase (GNAT) family IX92_05950 PF03831 PhnA domain IX92_05950 PF08274 PhnA Zinc-Ribbon IX92_05965 PF00583 Acetyltransferase (GNAT) family IX92_05985 PF08212 Lipocalin-like domain IX92_06000 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) IX92_06055 PF13673 Acetyltransferase (GNAT) domain IX92_06060 PF13302 Acetyltransferase (GNAT) domain IX92_06085 PF00583 Acetyltransferase (GNAT) family IX92_06095 PF12804 MobA-like NTP transferase domain IX92_06095 PF14602 Hexapeptide repeat of succinyl-transferase IX92_06095 PF00132 Bacterial transferase hexapeptide (six repeats) IX92_06100 PF13419 Haloacid dehalogenase-like hydrolase IX92_06115 PF01546 Peptidase family M20/M25/M40 IX92_06115 PF07687 Peptidase dimerisation domain IX92_06120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IX92_06125 PF04209 homogentisate 1,2-dioxygenase IX92_06135 PF02798 Glutathione S-transferase, N-terminal domain IX92_06135 PF14497 Glutathione S-transferase, C-terminal domain IX92_06150 PF00691 OmpA family IX92_06150 PF13488 Glycine zipper IX92_06165 PF01565 FAD binding domain IX92_06165 PF13183 4Fe-4S dicluster domain IX92_06165 PF02913 FAD linked oxidases, C-terminal domain IX92_06170 PF04191 Phospholipid methyltransferase IX92_06180 PF00221 Aromatic amino acid lyase IX92_06185 PF01175 Urocanase Rossmann-like domain IX92_06185 PF17392 Urocanase C-terminal domain IX92_06185 PF17391 Urocanase N-terminal domain IX92_06190 PF00491 Arginase family IX92_06195 PF01979 Amidohydrolase family IX92_06200 PF00392 Bacterial regulatory proteins, gntR family IX92_06200 PF07702 UTRA domain IX92_06205 PF07070 SpoOM protein IX92_06225 PF05724 Thiopurine S-methyltransferase (TPMT) IX92_06230 PF02222 ATP-grasp domain IX92_06235 PF01966 HD domain IX92_06235 PF11871 Domain of unknown function (DUF3391) IX92_06245 PF04172 LrgB-like family IX92_06250 PF03788 LrgA family IX92_06255 PF00929 Exonuclease IX92_06255 PF08411 Exonuclease C-terminal IX92_06295 PF13460 NAD(P)H-binding IX92_06300 PF01613 Flavin reductase like domain IX92_06310 PF02654 Cobalamin-5-phosphate synthase IX92_06315 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase IX92_06320 PF00300 Histidine phosphatase superfamily (branch 1) IX92_06330 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IX92_06335 PF01032 FecCD transport family IX92_06355 PF13185 GAF domain IX92_06355 PF00990 Diguanylate cyclase, GGDEF domain IX92_06365 PF07690 Major Facilitator Superfamily IX92_06370 PF03466 LysR substrate binding domain IX92_06370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_06375 PF00005 ABC transporter IX92_06455 PF01863 Protein of unknown function DUF45 IX92_06460 PF05971 RNA methyltransferase IX92_06475 PF00561 alpha/beta hydrolase fold IX92_06475 PF00364 Biotin-requiring enzyme IX92_06495 PF01590 GAF domain IX92_06495 PF00990 Diguanylate cyclase, GGDEF domain IX92_06495 PF00360 Phytochrome region IX92_06495 PF00563 EAL domain IX92_06510 PF13533 Biotin-lipoyl like IX92_06520 PF01970 Tripartite tricarboxylate transporter TctA family IX92_06540 PF00069 Protein kinase domain IX92_06590 PF07724 AAA domain (Cdc48 subfamily) IX92_06590 PF10431 C-terminal, D2-small domain, of ClpB protein IX92_06590 PF00004 ATPase family associated with various cellular activities (AAA) IX92_06590 PF17871 AAA lid domain IX92_06645 PF16671 Actin cross-linking domain IX92_06645 PF04717 Type VI secretion system, phage-baseplate injector IX92_06665 PF00285 Citrate synthase, C-terminal domain IX92_06670 PF00330 Aconitase family (aconitate hydratase) IX92_06670 PF00694 Aconitase C-terminal domain IX92_06675 PF04303 PrpF protein IX92_06680 PF16177 Acetyl-coenzyme A synthetase N-terminus IX92_06680 PF00501 AMP-binding enzyme IX92_06680 PF13193 AMP-binding enzyme C-terminal domain IX92_06700 PF04055 Radical SAM superfamily IX92_06705 PF06508 Queuosine biosynthesis protein QueC IX92_06715 PF05736 OprF membrane domain IX92_06715 PF00691 OmpA family IX92_06730 PF17785 PUA-like domain IX92_06730 PF10672 S-adenosylmethionine-dependent methyltransferase IX92_06735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_06735 PF00672 HAMP domain IX92_06735 PF02743 Cache domain IX92_06740 PF00708 Acylphosphatase IX92_06745 PF04358 DsrC like protein IX92_06750 PF01027 Inhibitor of apoptosis-promoting Bax1 IX92_06755 PF00005 ABC transporter IX92_06760 PF00528 Binding-protein-dependent transport system inner membrane component IX92_06765 PF00528 Binding-protein-dependent transport system inner membrane component IX92_06770 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX92_06775 PF14824 Sirohaem biosynthesis protein central IX92_06775 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IX92_06775 PF10414 Sirohaem synthase dimerisation region IX92_06780 PF04461 Protein of unknown function (DUF520) IX92_06785 PF00793 DAHP synthetase I family IX92_06790 PF05524 PEP-utilising enzyme, N-terminal IX92_06790 PF00391 PEP-utilising enzyme, mobile domain IX92_06790 PF02896 PEP-utilising enzyme, TIM barrel domain IX92_06815 PF02470 MlaD protein IX92_06820 PF04403 Paraquat-inducible protein A IX92_06825 PF00005 ABC transporter IX92_06825 PF00664 ABC transporter transmembrane region IX92_06830 PF13185 GAF domain IX92_06835 PF17516 ProQ C-terminal domain IX92_06835 PF04352 ProQ/FINO family IX92_06840 PF17804 Tail specific protease N-terminal domain IX92_06840 PF03572 Peptidase family S41 IX92_06840 PF11818 C-terminal domain of tail specific protease (DUF3340) IX92_06840 PF00595 PDZ domain IX92_06850 PF17432 Domain of unknown function (DUF3458_C) ARM repeats IX92_06850 PF11940 Domain of unknown function (DUF3458) Ig-like fold IX92_06850 PF01433 Peptidase family M1 domain IX92_06860 PF05088 Bacterial NAD-glutamate dehydrogenase IX92_06865 PF01180 Dihydroorotate dehydrogenase IX92_06870 PF07126 Cell-division protein ZapC IX92_06875 PF02926 THUMP domain IX92_06875 PF01170 Putative RNA methylase family UPF0020 IX92_06875 PF10672 S-adenosylmethionine-dependent methyltransferase IX92_06885 PF16326 ABC transporter C-terminal domain IX92_06885 PF00005 ABC transporter IX92_06885 PF12848 ABC transporter IX92_06895 PF04957 Ribosome modulation factor IX92_06900 PF07977 FabA-like domain IX92_06905 PF05362 Lon protease (S16) C-terminal proteolytic domain IX92_06905 PF13654 AAA domain IX92_06910 PF17414 MatP C-terminal ribbon-helix-helix domain IX92_06910 PF06303 MatP N-terminal domain IX92_06930 PF01810 LysE type translocator IX92_06965 PF13411 MerR HTH family regulatory protein IX92_07085 PF00842 Alanine racemase, C-terminal domain IX92_07085 PF01168 Alanine racemase, N-terminal domain IX92_07090 PF00672 HAMP domain IX92_07090 PF12729 Four helix bundle sensory module for signal transduction IX92_07090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_07100 PF01565 FAD binding domain IX92_07100 PF04030 D-arabinono-1,4-lactone oxidase IX92_07115 PF07968 Leukocidin/Hemolysin toxin family IX92_07115 PF00652 Ricin-type beta-trefoil lectin domain IX92_07130 PF11047 Salmonella outer protein D IX92_07150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IX92_07150 PF02874 ATP synthase alpha/beta family, beta-barrel domain IX92_07150 PF18269 T3SS EscN ATPase C-terminal domain IX92_07155 PF00771 FHIPEP family IX92_07170 PF05932 Tir chaperone protein (CesT) family IX92_07190 PF01514 Secretory protein of YscJ/FliF family IX92_07210 PF12833 Helix-turn-helix domain IX92_07225 PF02797 Chalcone and stilbene synthases, C-terminal domain IX92_07225 PF00195 Chalcone and stilbene synthases, N-terminal domain IX92_07240 PF00753 Metallo-beta-lactamase superfamily IX92_07275 PF04888 Secretion system effector C (SseC) like family IX92_07320 PF00512 His Kinase A (phospho-acceptor) domain IX92_07320 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IX92_07320 PF00672 HAMP domain IX92_07320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_07320 PF00072 Response regulator receiver domain IX92_07320 PF01627 Hpt domain IX92_07330 PF00072 Response regulator receiver domain IX92_07330 PF00196 Bacterial regulatory proteins, luxR family IX92_07335 PF01312 FlhB HrpN YscU SpaS Family IX92_07340 PF01311 Bacterial export proteins, family 1 IX92_07345 PF01313 Bacterial export proteins, family 3 IX92_07350 PF00813 FliP family IX92_07365 PF00115 Cytochrome C and Quinol oxidase polypeptide I IX92_07380 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IX92_07380 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP IX92_07390 PF00403 Heavy-metal-associated domain IX92_07405 PF13545 Crp-like helix-turn-helix domain IX92_07405 PF00027 Cyclic nucleotide-binding domain IX92_07410 PF00582 Universal stress protein family IX92_07415 PF01171 PP-loop family IX92_07435 PF00005 ABC transporter IX92_07435 PF08402 TOBE domain IX92_07440 PF00528 Binding-protein-dependent transport system inner membrane component IX92_07445 PF00528 Binding-protein-dependent transport system inner membrane component IX92_07450 PF13416 Bacterial extracellular solute-binding protein IX92_07455 PF13416 Bacterial extracellular solute-binding protein IX92_07460 PF00990 Diguanylate cyclase, GGDEF domain IX92_07460 PF17155 Gammaproteobacterial periplasmic sensor domain IX92_07465 PF02146 Sir2 family IX92_07470 PF00909 Ammonium Transporter Family IX92_07485 PF13247 4Fe-4S dicluster domain IX92_07490 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IX92_07490 PF00384 Molybdopterin oxidoreductase IX92_07490 PF01568 Molydopterin dinucleotide binding domain IX92_07520 PF02634 FdhD/NarQ family IX92_07525 PF00672 HAMP domain IX92_07525 PF02743 Cache domain IX92_07525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_07530 PF01292 Prokaryotic cytochrome b561 IX92_07560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_07560 PF03466 LysR substrate binding domain IX92_07570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_07570 PF03466 LysR substrate binding domain IX92_07575 PF03591 AzlC protein IX92_07595 PF01645 Conserved region in glutamate synthase IX92_07610 PF00873 AcrB/AcrD/AcrF family IX92_07640 PF00005 ABC transporter IX92_07640 PF12848 ABC transporter IX92_07650 PF04542 Sigma-70 region 2 IX92_07650 PF08281 Sigma-70, region 4 IX92_07665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_07665 PF00512 His Kinase A (phospho-acceptor) domain IX92_07665 PF00989 PAS fold IX92_07670 PF02954 Bacterial regulatory protein, Fis family IX92_07670 PF00072 Response regulator receiver domain IX92_07670 PF00158 Sigma-54 interaction domain IX92_07675 PF12849 PBP superfamily domain IX92_07680 PF00528 Binding-protein-dependent transport system inner membrane component IX92_07685 PF08402 TOBE domain IX92_07685 PF00005 ABC transporter IX92_07690 PF12804 MobA-like NTP transferase domain IX92_07695 PF03453 MoeA N-terminal region (domain I and II) IX92_07695 PF03454 MoeA C-terminal region (domain IV) IX92_07695 PF00994 Probable molybdopterin binding domain IX92_07725 PF00480 ROK family IX92_07740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_07740 PF00672 HAMP domain IX92_07740 PF02743 Cache domain IX92_07745 PF00877 NlpC/P60 family IX92_07765 PF00677 Lumazine binding domain IX92_07770 PF01554 MatE IX92_07810 PF17149 Periplasmic sensor domain found in signal transduction proteins IX92_07810 PF00072 Response regulator receiver domain IX92_07810 PF01627 Hpt domain IX92_07810 PF00512 His Kinase A (phospho-acceptor) domain IX92_07810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_07810 PF00672 HAMP domain IX92_07815 PF02954 Bacterial regulatory protein, Fis family IX92_07815 PF00158 Sigma-54 interaction domain IX92_07815 PF00072 Response regulator receiver domain IX92_07825 PF00534 Glycosyl transferases group 1 IX92_07825 PF13439 Glycosyltransferase Family 4 IX92_07830 PF00862 Sucrose synthase IX92_07830 PF00534 Glycosyl transferases group 1 IX92_07845 PF00132 Bacterial transferase hexapeptide (six repeats) IX92_07845 PF14602 Hexapeptide repeat of succinyl-transferase IX92_07845 PF12464 Maltose acetyltransferase IX92_07860 PF00534 Glycosyl transferases group 1 IX92_07860 PF13439 Glycosyltransferase Family 4 IX92_07870 PF02397 Bacterial sugar transferase IX92_07895 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) IX92_07905 PF00593 TonB dependent receptor IX92_07905 PF07715 TonB-dependent Receptor Plug Domain IX92_07910 PF00501 AMP-binding enzyme IX92_07910 PF13193 AMP-binding enzyme C-terminal domain IX92_07910 PF00668 Condensation domain IX92_07910 PF00550 Phosphopantetheine attachment site IX92_07915 PF00550 Phosphopantetheine attachment site IX92_07915 PF00501 AMP-binding enzyme IX92_07915 PF13193 AMP-binding enzyme C-terminal domain IX92_07915 PF00668 Condensation domain IX92_07920 PF03621 MbtH-like protein IX92_07925 PF00005 ABC transporter IX92_07930 PF01032 FecCD transport family IX92_07935 PF01497 Periplasmic binding protein IX92_07940 PF00005 ABC transporter IX92_07945 PF17837 4'-phosphopantetheinyl transferase N-terminal domain IX92_07945 PF01648 4'-phosphopantetheinyl transferase superfamily IX92_07950 PF02595 Glycerate kinase family IX92_07955 PF13556 PucR C-terminal helix-turn-helix domain IX92_07955 PF17853 GGDEF-like domain IX92_07955 PF05651 Putative sugar diacid recognition IX92_07960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_07960 PF03466 LysR substrate binding domain IX92_07965 PF07690 Major Facilitator Superfamily IX92_07975 PF03606 C4-dicarboxylate anaerobic carrier IX92_07980 PF01546 Peptidase family M20/M25/M40 IX92_07980 PF07687 Peptidase dimerisation domain IX92_07985 PF07729 FCD domain IX92_07985 PF00392 Bacterial regulatory proteins, gntR family IX92_07995 PF06629 MltA-interacting protein MipA IX92_08000 PF00512 His Kinase A (phospho-acceptor) domain IX92_08000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_08000 PF00672 HAMP domain IX92_08005 PF00486 Transcriptional regulatory protein, C terminal IX92_08005 PF00072 Response regulator receiver domain IX92_08015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_08015 PF03466 LysR substrate binding domain IX92_08020 PF01278 Omptin family IX92_08030 PF01794 Ferric reductase like transmembrane component IX92_08035 PF00174 Oxidoreductase molybdopterin binding domain IX92_08050 PF14824 Sirohaem biosynthesis protein central IX92_08050 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IX92_08050 PF10414 Sirohaem synthase dimerisation region IX92_08055 PF01226 Formate/nitrite transporter IX92_08060 PF13806 Rieske-like [2Fe-2S] domain IX92_08065 PF18267 Rubredoxin NAD+ reductase C-terminal domain IX92_08065 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX92_08065 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IX92_08065 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IX92_08065 PF04324 BFD-like [2Fe-2S] binding domain IX92_08070 PF12729 Four helix bundle sensory module for signal transduction IX92_08070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_08070 PF00672 HAMP domain IX92_08075 PF00990 Diguanylate cyclase, GGDEF domain IX92_08075 PF17151 Periplasmic sensor domain IX92_08095 PF12431 Transcriptional regulator IX92_08095 PF00072 Response regulator receiver domain IX92_08100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_08100 PF00989 PAS fold IX92_08100 PF17203 Single cache domain 3 IX92_08100 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain IX92_08120 PF02472 Biopolymer transport protein ExbD/TolR IX92_08125 PF01618 MotA/TolQ/ExbB proton channel family IX92_08130 PF01618 MotA/TolQ/ExbB proton channel family IX92_08140 PF00593 TonB dependent receptor IX92_08140 PF07715 TonB-dependent Receptor Plug Domain IX92_08145 PF16527 Two-component sensor protein CpxA, periplasmic domain IX92_08145 PF00672 HAMP domain IX92_08145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_08145 PF00512 His Kinase A (phospho-acceptor) domain IX92_08150 PF00072 Response regulator receiver domain IX92_08150 PF00486 Transcriptional regulatory protein, C terminal IX92_08155 PF00753 Metallo-beta-lactamase superfamily IX92_08170 PF01259 SAICAR synthetase IX92_08195 PF04055 Radical SAM superfamily IX92_08200 PF11230 Protein of unknown function (DUF3029) IX92_08205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_08205 PF00672 HAMP domain IX92_08210 PF00521 DNA gyrase/topoisomerase IV, subunit A IX92_08210 PF03989 DNA gyrase C-terminal domain, beta-propeller IX92_08220 PF00317 Ribonucleotide reductase, all-alpha domain IX92_08220 PF02867 Ribonucleotide reductase, barrel domain IX92_08220 PF03477 ATP cone domain IX92_08225 PF00268 Ribonucleotide reductase, small chain IX92_08230 PF00111 2Fe-2S iron-sulfur cluster binding domain IX92_08240 PF00994 Probable molybdopterin binding domain IX92_08255 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IX92_08260 PF03435 Saccharopine dehydrogenase NADP binding domain IX92_08260 PF16653 Saccharopine dehydrogenase C-terminal domain IX92_08265 PF00202 Aminotransferase class-III IX92_08285 PF06965 Na+/H+ antiporter 1 IX92_08300 PF00005 ABC transporter IX92_08305 PF01554 MatE IX92_08310 PF13460 NAD(P)H-binding IX92_08310 PF11066 Protein of unknown function (DUF2867) IX92_08320 PF07690 Major Facilitator Superfamily IX92_08325 PF00849 RNA pseudouridylate synthase IX92_08325 PF01479 S4 domain IX92_08330 PF00271 Helicase conserved C-terminal domain IX92_08330 PF04851 Type III restriction enzyme, res subunit IX92_08340 PF00486 Transcriptional regulatory protein, C terminal IX92_08340 PF00072 Response regulator receiver domain IX92_08345 PF00672 HAMP domain IX92_08345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_08345 PF00512 His Kinase A (phospho-acceptor) domain IX92_08370 PF00873 AcrB/AcrD/AcrF family IX92_08375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IX92_08395 PF00535 Glycosyl transferase family 2 IX92_08400 PF01386 Ribosomal L25p family IX92_08405 PF00392 Bacterial regulatory proteins, gntR family IX92_08405 PF07702 UTRA domain IX92_08410 PF00367 phosphotransferase system, EIIB IX92_08410 PF02378 Phosphotransferase system, EIIC IX92_08415 PF00251 Glycosyl hydrolases family 32 N-terminal domain IX92_08415 PF08244 Glycosyl hydrolases family 32 C terminal IX92_08425 PF03466 LysR substrate binding domain IX92_08425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_08430 PF01039 Carboxyl transferase domain IX92_08430 PF17848 Acetyl-coA carboxylase zinc finger domain IX92_08440 PF02583 Metal-sensitive transcriptional repressor IX92_08450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_08450 PF03466 LysR substrate binding domain IX92_08460 PF00106 short chain dehydrogenase IX92_08495 PF00677 Lumazine binding domain IX92_08510 PF03466 LysR substrate binding domain IX92_08510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_08515 PF13533 Biotin-lipoyl like IX92_08520 PF07690 Major Facilitator Superfamily IX92_08545 PF01327 Polypeptide deformylase IX92_08550 PF03352 Methyladenine glycosylase IX92_08550 PF13302 Acetyltransferase (GNAT) domain IX92_08550 PF00117 Glutamine amidotransferase class-I IX92_08550 PF00958 GMP synthase C terminal domain IX92_08550 PF13673 Acetyltransferase (GNAT) domain IX92_08565 PF02264 LamB porin IX92_08570 PF00881 Nitroreductase family IX92_08620 PF00589 Phage integrase family IX92_08620 PF13495 Phage integrase, N-terminal SAM-like domain IX92_08630 PF00563 EAL domain IX92_08630 PF00990 Diguanylate cyclase, GGDEF domain IX92_08630 PF03707 Bacterial signalling protein N terminal repeat IX92_08665 PF01235 Sodium:alanine symporter family IX92_08670 PF01810 LysE type translocator IX92_08675 PF02074 Carboxypeptidase Taq (M32) metallopeptidase IX92_08680 PF02581 Thiamine monophosphate synthase IX92_08685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_08685 PF03466 LysR substrate binding domain IX92_08710 PF02028 BCCT, betaine/carnitine/choline family transporter IX92_08720 PF00171 Aldehyde dehydrogenase family IX92_08730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_08730 PF03466 LysR substrate binding domain IX92_08755 PF00561 alpha/beta hydrolase fold IX92_08775 PF03328 HpcH/HpaI aldolase/citrate lyase family IX92_08780 PF00356 Bacterial regulatory proteins, lacI family IX92_08785 PF03480 Bacterial extracellular solute-binding protein, family 7 IX92_08795 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IX92_08810 PF00474 Sodium:solute symporter family IX92_08815 PF00356 Bacterial regulatory proteins, lacI family IX92_08825 PF08521 Two-component sensor kinase N-terminal IX92_08825 PF00512 His Kinase A (phospho-acceptor) domain IX92_08825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_08830 PF00486 Transcriptional regulatory protein, C terminal IX92_08830 PF00072 Response regulator receiver domain IX92_08835 PF00873 AcrB/AcrD/AcrF family IX92_08845 PF02321 Outer membrane efflux protein IX92_08850 PF03150 Di-haem cytochrome c peroxidase IX92_08850 PF14376 Haem-binding domain IX92_08850 PF00034 Cytochrome c IX92_08855 PF09308 LuxQ, periplasmic IX92_08855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_08855 PF00072 Response regulator receiver domain IX92_08855 PF00512 His Kinase A (phospho-acceptor) domain IX92_08860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_08860 PF00512 His Kinase A (phospho-acceptor) domain IX92_08860 PF09308 LuxQ, periplasmic IX92_08860 PF00072 Response regulator receiver domain IX92_08865 PF16326 ABC transporter C-terminal domain IX92_08865 PF12848 ABC transporter IX92_08865 PF00005 ABC transporter IX92_08870 PF00072 Response regulator receiver domain IX92_08880 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IX92_08890 PF07690 Major Facilitator Superfamily IX92_08895 PF00535 Glycosyl transferase family 2 IX92_08895 PF02709 N-terminal domain of galactosyltransferase IX92_08905 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IX92_08905 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IX92_08910 PF04962 KduI/IolB family IX92_08925 PF01116 Fructose-bisphosphate aldolase class-II IX92_08935 PF00294 pfkB family carbohydrate kinase IX92_08940 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IX92_08940 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IX92_08945 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IX92_08945 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IX92_08945 PF00205 Thiamine pyrophosphate enzyme, central domain IX92_08950 PF01261 Xylose isomerase-like TIM barrel IX92_08955 PF00083 Sugar (and other) transporter IX92_08975 PF02803 Thiolase, C-terminal domain IX92_08975 PF00108 Thiolase, N-terminal domain IX92_08980 PF01144 Coenzyme A transferase IX92_08985 PF01144 Coenzyme A transferase IX92_09010 PF00171 Aldehyde dehydrogenase family IX92_09015 PF01261 Xylose isomerase-like TIM barrel IX92_09020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IX92_09020 PF00205 Thiamine pyrophosphate enzyme, central domain IX92_09020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IX92_09025 PF00294 pfkB family carbohydrate kinase IX92_09030 PF13407 Periplasmic binding protein domain IX92_09035 PF00005 ABC transporter IX92_09040 PF02653 Branched-chain amino acid transport system / permease component IX92_09050 PF01565 FAD binding domain IX92_09050 PF09330 D-lactate dehydrogenase, membrane binding IX92_09060 PF03466 LysR substrate binding domain IX92_09060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_09065 PF01554 MatE IX92_09075 PF00356 Bacterial regulatory proteins, lacI family IX92_09075 PF13407 Periplasmic binding protein domain IX92_09080 PF00294 pfkB family carbohydrate kinase IX92_09085 PF00563 EAL domain IX92_09085 PF08668 HDOD domain IX92_09095 PF08447 PAS fold IX92_09095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_09095 PF13426 PAS domain IX92_09105 PF08244 Glycosyl hydrolases family 32 C terminal IX92_09105 PF00251 Glycosyl hydrolases family 32 N-terminal domain IX92_09110 PF02264 LamB porin IX92_09110 PF11471 Maltoporin periplasmic N-terminal extension IX92_09115 PF00356 Bacterial regulatory proteins, lacI family IX92_09120 PF00367 phosphotransferase system, EIIB IX92_09120 PF02378 Phosphotransferase system, EIIC IX92_09125 PF00857 Isochorismatase family IX92_09130 PF17954 Quercetinase C-terminal cupin domain IX92_09130 PF02678 Pirin IX92_09135 PF03466 LysR substrate binding domain IX92_09135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_09175 PF03147 Ferredoxin-fold anticodon binding domain IX92_09175 PF03483 B3/4 domain IX92_09175 PF03484 tRNA synthetase B5 domain IX92_09175 PF01588 Putative tRNA binding domain IX92_09175 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IX92_09180 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IX92_09180 PF01409 tRNA synthetases class II core domain (F) IX92_09185 PF17158 Membrane-associated sensor, integral membrane domain IX92_09185 PF00990 Diguanylate cyclase, GGDEF domain IX92_09210 PF07995 Glucose / Sorbosone dehydrogenase IX92_09220 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IX92_09245 PF01066 CDP-alcohol phosphatidyltransferase IX92_09250 PF08459 UvrC Helix-hairpin-helix N-terminal IX92_09250 PF02151 UvrB/uvrC motif IX92_09250 PF01541 GIY-YIG catalytic domain IX92_09255 PF00196 Bacterial regulatory proteins, luxR family IX92_09255 PF00072 Response regulator receiver domain IX92_09270 PF00136 DNA polymerase family B IX92_09270 PF03104 DNA polymerase family B, exonuclease domain IX92_09275 PF16458 Beta-prism lectin IX92_09275 PF12563 Hemolytic toxin N terminal IX92_09275 PF07968 Leukocidin/Hemolysin toxin family IX92_09285 PF01132 Elongation factor P (EF-P) OB domain IX92_09285 PF09285 Elongation factor P, C-terminal IX92_09285 PF08207 Elongation factor P (EF-P) KOW-like domain IX92_09290 PF04269 Protein of unknown function, DUF440 IX92_09305 PF00072 Response regulator receiver domain IX92_09305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_09310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_09310 PF00072 Response regulator receiver domain IX92_09320 PF04279 Intracellular septation protein A IX92_09325 PF03061 Thioesterase superfamily IX92_09330 PF03795 YCII-related domain IX92_09345 PF06945 Protein of unknown function (DUF1289) IX92_09355 PF13416 Bacterial extracellular solute-binding protein IX92_09360 PF00528 Binding-protein-dependent transport system inner membrane component IX92_09365 PF00005 ABC transporter IX92_09370 PF01066 CDP-alcohol phosphatidyltransferase IX92_09375 PF17785 PUA-like domain IX92_09375 PF10672 S-adenosylmethionine-dependent methyltransferase IX92_09380 PF00849 RNA pseudouridylate synthase IX92_09385 PF00209 Sodium:neurotransmitter symporter family IX92_09390 PF13396 Phospholipase_D-nuclease N-terminal IX92_09390 PF13091 PLD-like domain IX92_09395 PF01053 Cys/Met metabolism PLP-dependent enzyme IX92_09400 PF00561 alpha/beta hydrolase fold IX92_09405 PF03280 Proteobacterial lipase chaperone protein IX92_09410 PF03352 Methyladenine glycosylase IX92_09415 PF00873 AcrB/AcrD/AcrF family IX92_09420 PF13533 Biotin-lipoyl like IX92_09425 PF00529 HlyD membrane-fusion protein of T1SS IX92_09425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IX92_09430 PF04024 PspC domain IX92_09435 PF06667 Phage shock protein B IX92_09440 PF04012 PspA/IM30 family IX92_09445 PF02954 Bacterial regulatory protein, Fis family IX92_09445 PF00158 Sigma-54 interaction domain IX92_09450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX92_09455 PF00528 Binding-protein-dependent transport system inner membrane component IX92_09460 PF12911 N-terminal TM domain of oligopeptide transport permease C IX92_09460 PF00528 Binding-protein-dependent transport system inner membrane component IX92_09465 PF00005 ABC transporter IX92_09465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX92_09470 PF00005 ABC transporter IX92_09485 PF01368 DHH family IX92_09485 PF02833 DHHA2 domain IX92_09495 PF01709 Transcriptional regulator IX92_09500 PF01502 Phosphoribosyl-AMP cyclohydrolase IX92_09500 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase IX92_09505 PF00977 Histidine biosynthesis protein IX92_09510 PF00977 Histidine biosynthesis protein IX92_09515 PF00117 Glutamine amidotransferase class-I IX92_09520 PF08645 Polynucleotide kinase 3 phosphatase IX92_09520 PF00475 Imidazoleglycerol-phosphate dehydratase IX92_09525 PF00155 Aminotransferase class I and II IX92_09530 PF00815 Histidinol dehydrogenase IX92_09535 PF01634 ATP phosphoribosyltransferase IX92_09535 PF08029 HisG, C-terminal domain IX92_09540 PF03553 Na+/H+ antiporter family IX92_09545 PF00816 H-NS histone family IX92_09550 PF00294 pfkB family carbohydrate kinase IX92_09565 PF04356 Protein of unknown function (DUF489) IX92_09570 PF08328 Adenylosuccinate lyase C-terminal IX92_09570 PF00206 Lyase IX92_09580 PF16036 Chalcone isomerase-like IX92_09605 PF00106 short chain dehydrogenase IX92_09605 PF00561 alpha/beta hydrolase fold IX92_09625 PF12697 Alpha/beta hydrolase family IX92_09625 PF08241 Methyltransferase domain IX92_09630 PF00155 Aminotransferase class I and II IX92_09635 PF04055 Radical SAM superfamily IX92_09635 PF06968 Biotin and Thiamin Synthesis associated domain IX92_09640 PF00202 Aminotransferase class-III IX92_09645 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) IX92_09650 PF13609 Gram-negative porin IX92_09655 PF13307 Helicase C-terminal domain IX92_09655 PF06733 DEAD_2 IX92_09660 PF01925 Sulfite exporter TauE/SafE IX92_09670 PF10689 Protein of unknown function (DUF2496) IX92_09675 PF08007 Cupin superfamily protein IX92_09680 PF00672 HAMP domain IX92_09680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_09685 PF03372 Endonuclease/Exonuclease/phosphatase family IX92_09690 PF12241 Trans-2-enoyl-CoA reductase catalytic region IX92_09690 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase IX92_09690 PF07055 Enoyl reductase FAD binding domain IX92_09695 PF02770 Acyl-CoA dehydrogenase, middle domain IX92_09695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX92_09695 PF09317 Domain of unknown function (DUF1974) IX92_09695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX92_09700 PF16295 Tetracyclin repressor-like, C-terminal domain IX92_09700 PF00440 Bacterial regulatory proteins, tetR family IX92_09715 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase IX92_09720 PF00535 Glycosyl transferase family 2 IX92_09725 PF00072 Response regulator receiver domain IX92_09725 PF00486 Transcriptional regulatory protein, C terminal IX92_09730 PF00512 His Kinase A (phospho-acceptor) domain IX92_09730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_09730 PF00672 HAMP domain IX92_09745 PF00480 ROK family IX92_09750 PF01238 Phosphomannose isomerase type I IX92_09760 PF03479 Plants and Prokaryotes Conserved (PCC) domain IX92_09760 PF00132 Bacterial transferase hexapeptide (six repeats) IX92_09760 PF12804 MobA-like NTP transferase domain IX92_09765 PF01161 Phosphatidylethanolamine-binding protein IX92_09770 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IX92_09785 PF06610 L-alanine exporter IX92_09790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_09790 PF00512 His Kinase A (phospho-acceptor) domain IX92_09790 PF09308 LuxQ, periplasmic IX92_09790 PF00072 Response regulator receiver domain IX92_09810 PF02600 Disulfide bond formation protein DsbB IX92_09815 PF02445 Quinolinate synthetase A protein IX92_09820 PF13174 Tetratricopeptide repeat IX92_09820 PF16331 TolA binding protein trimerisation IX92_09825 PF00691 OmpA family IX92_09840 PF02472 Biopolymer transport protein ExbD/TolR IX92_09845 PF01618 MotA/TolQ/ExbB proton channel family IX92_09850 PF03061 Thioesterase superfamily IX92_09860 PF08173 Membrane bound YbgT-like protein IX92_09865 PF02322 Cytochrome bd terminal oxidase subunit II IX92_09870 PF01654 Cytochrome bd terminal oxidase subunit I IX92_09875 PF05496 Holliday junction DNA helicase RuvB P-loop domain IX92_09875 PF05491 RuvB C-terminal winged helix domain IX92_09875 PF17864 RuvB AAA lid domain IX92_09880 PF07499 RuvA, C-terminal domain IX92_09880 PF01330 RuvA N terminal domain IX92_09885 PF02203 Tar ligand binding domain homologue IX92_09885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_09885 PF00672 HAMP domain IX92_09890 PF02075 Crossover junction endodeoxyribonuclease RuvC IX92_09915 PF02696 Uncharacterized ACR, YdiU/UPF0061 family IX92_09925 PF00384 Molybdopterin oxidoreductase IX92_09925 PF18364 Molybdopterin oxidoreductase N-terminal domain IX92_09925 PF01568 Molydopterin dinucleotide binding domain IX92_09930 PF03264 NapC/NirT cytochrome c family, N-terminal region IX92_09935 PF06796 Periplasmic nitrate reductase protein NapE IX92_09940 PF03649 Uncharacterised protein family (UPF0014) IX92_09945 PF01226 Formate/nitrite transporter IX92_09970 PF17871 AAA lid domain IX92_09970 PF02861 Clp amino terminal domain, pathogenicity island component IX92_09970 PF10431 C-terminal, D2-small domain, of ClpB protein IX92_09970 PF07724 AAA domain (Cdc48 subfamily) IX92_09970 PF00004 ATPase family associated with various cellular activities (AAA) IX92_09975 PF02617 ATP-dependent Clp protease adaptor protein ClpS IX92_09980 PF00313 'Cold-shock' DNA-binding domain IX92_09985 PF03971 Monomeric isocitrate dehydrogenase IX92_09990 PF00849 RNA pseudouridylate synthase IX92_09995 PF01336 OB-fold nucleic acid binding domain IX92_09995 PF02938 GAD domain IX92_09995 PF00152 tRNA synthetases class II (D, K and N) IX92_10000 PF01904 Protein of unknown function DUF72 IX92_10005 PF13649 Methyltransferase domain IX92_10010 PF08003 Protein of unknown function (DUF1698) IX92_10015 PF08443 RimK-like ATP-grasp domain IX92_10015 PF18030 RimK PreATP-grasp domain IX92_10030 PF00732 GMC oxidoreductase IX92_10030 PF05199 GMC oxidoreductase IX92_10035 PF00171 Aldehyde dehydrogenase family IX92_10040 PF12833 Helix-turn-helix domain IX92_10040 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IX92_10045 PF04310 MukB N-terminal IX92_10045 PF16330 MukB hinge domain IX92_10050 PF04288 MukE-like family IX92_10055 PF17193 MukF C-terminal domain IX92_10055 PF17192 MukF middle domain IX92_10055 PF03882 MukF winged-helix domain IX92_10065 PF02698 DUF218 domain IX92_10070 PF00072 Response regulator receiver domain IX92_10070 PF00486 Transcriptional regulatory protein, C terminal IX92_10075 PF02613 Nitrate reductase delta subunit IX92_10080 PF00356 Bacterial regulatory proteins, lacI family IX92_10085 PF04993 TfoX N-terminal domain IX92_10085 PF04994 TfoX C-terminal domain IX92_10110 PF00483 Nucleotidyl transferase IX92_10115 PF01751 Toprim domain IX92_10115 PF08272 Topoisomerase I zinc-ribbon-like IX92_10115 PF01396 Topoisomerase DNA binding C4 zinc finger IX92_10115 PF01131 DNA topoisomerase IX92_10120 PF10692 Protein of unknown function (DUF2498) IX92_10140 PF04377 Arginine-tRNA-protein transferase, C terminus IX92_10140 PF04376 Arginine-tRNA-protein transferase, N terminus IX92_10145 PF01176 Translation initiation factor 1A / IF-1 IX92_10150 PF00265 Thymidine kinase IX92_10155 PF01406 tRNA synthetases class I (C) catalytic domain IX92_10155 PF09190 DALR domain IX92_10160 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IX92_10170 PF00563 EAL domain IX92_10170 PF08668 HDOD domain IX92_10175 PF02810 SEC-C motif IX92_10180 PF07023 Protein of unknown function (DUF1315) IX92_10190 PF01641 SelR domain IX92_10195 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IX92_10195 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IX92_10200 PF01263 Aldose 1-epimerase IX92_10205 PF00672 HAMP domain IX92_10205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_10205 PF02743 Cache domain IX92_10210 PF13847 Methyltransferase domain IX92_10225 PF00245 Alkaline phosphatase IX92_10235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IX92_10245 PF00924 Mechanosensitive ion channel IX92_10245 PF05552 Conserved TM helix IX92_10250 PF03692 Putative zinc- or iron-chelating domain IX92_10260 PF07662 Na+ dependent nucleoside transporter C-terminus IX92_10260 PF07670 Nucleoside recognition IX92_10260 PF01773 Na+ dependent nucleoside transporter N-terminus IX92_10265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_10265 PF03466 LysR substrate binding domain IX92_10270 PF13406 Transglycosylase SLT domain IX92_10275 PF05166 YcgL domain IX92_10285 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IX92_10290 PF03776 Septum formation topological specificity factor MinE IX92_10295 PF00171 Aldehyde dehydrogenase family IX92_10295 PF00465 Iron-containing alcohol dehydrogenase IX92_10300 PF01914 MarC family integral membrane protein IX92_10305 PF00027 Cyclic nucleotide-binding domain IX92_10305 PF00520 Ion transport protein IX92_10310 PF01118 Semialdehyde dehydrogenase, NAD binding domain IX92_10310 PF02774 Semialdehyde dehydrogenase, dimerisation domain IX92_10315 PF03553 Na+/H+ antiporter family IX92_10340 PF07208 Protein of unknown function (DUF1414) IX92_10345 PF11893 Domain of unknown function (DUF3413) IX92_10345 PF00884 Sulfatase IX92_10355 PF02743 Cache domain IX92_10355 PF00672 HAMP domain IX92_10355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_10365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_10365 PF00672 HAMP domain IX92_10365 PF02743 Cache domain IX92_10380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_10380 PF00989 PAS fold IX92_10380 PF00512 His Kinase A (phospho-acceptor) domain IX92_10385 PF00158 Sigma-54 interaction domain IX92_10385 PF00072 Response regulator receiver domain IX92_10385 PF02954 Bacterial regulatory protein, Fis family IX92_10405 PF00293 NUDIX domain IX92_10405 PF13344 Haloacid dehalogenase-like hydrolase IX92_10410 PF00850 Histone deacetylase domain IX92_10415 PF00106 short chain dehydrogenase IX92_10420 PF01161 Phosphatidylethanolamine-binding protein IX92_10430 PF01751 Toprim domain IX92_10430 PF01131 DNA topoisomerase IX92_10435 PF00462 Glutaredoxin IX92_10440 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IX92_10440 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IX92_10455 PF01451 Low molecular weight phosphotyrosine protein phosphatase IX92_10460 PF01227 GTP cyclohydrolase I IX92_10460 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IX92_10465 PF02152 Dihydroneopterin aldolase IX92_10470 PF01227 GTP cyclohydrolase I IX92_10480 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP IX92_10480 PF12557 Cob(I)alamin adenosyltransferase N terminal IX92_10490 PF05170 AsmA family IX92_10495 PF00485 Phosphoribulokinase / Uridine kinase family IX92_10500 PF10609 NUBPL iron-transfer P-loop NTPase IX92_10505 PF09334 tRNA synthetases class I (M) IX92_10505 PF01588 Putative tRNA binding domain IX92_10530 PF01048 Phosphorylase superfamily IX92_10535 PF00403 Heavy-metal-associated domain IX92_10540 PF01554 MatE IX92_10545 PF00571 CBS domain IX92_10555 PF00990 Diguanylate cyclase, GGDEF domain IX92_10560 PF02391 MoaE protein IX92_10565 PF02597 ThiS family IX92_10570 PF01967 MoaC family IX92_10575 PF00994 Probable molybdopterin binding domain IX92_10580 PF06463 Molybdenum Cofactor Synthesis C IX92_10580 PF04055 Radical SAM superfamily IX92_10585 PF01933 Uncharacterised protein family UPF0052 IX92_10590 PF01627 Hpt domain IX92_10595 PF00158 Sigma-54 interaction domain IX92_10595 PF02954 Bacterial regulatory protein, Fis family IX92_10595 PF00072 Response regulator receiver domain IX92_10600 PF17757 UvrB interaction domain IX92_10600 PF02151 UvrB/uvrC motif IX92_10600 PF04851 Type III restriction enzyme, res subunit IX92_10600 PF00271 Helicase conserved C-terminal domain IX92_10600 PF12344 Ultra-violet resistance protein B IX92_10615 PF01551 Peptidase family M23 IX92_10615 PF04225 Opacity-associated protein A LysM-like domain IX92_10630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IX92_10630 PF18269 T3SS EscN ATPase C-terminal domain IX92_10640 PF01706 FliG C-terminal domain IX92_10640 PF14841 FliG middle domain IX92_10640 PF14842 FliG N-terminal domain IX92_10645 PF08345 Flagellar M-ring protein C-terminal IX92_10645 PF01514 Secretory protein of YscJ/FliF family IX92_10650 PF02049 Flagellar hook-basal body complex protein FliE IX92_10655 PF02954 Bacterial regulatory protein, Fis family IX92_10655 PF00072 Response regulator receiver domain IX92_10655 PF00158 Sigma-54 interaction domain IX92_10660 PF13488 Glycine zipper IX92_10660 PF00691 OmpA family IX92_10670 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IX92_10675 PF00813 FliP family IX92_10680 PF01313 Bacterial export proteins, family 3 IX92_10685 PF01311 Bacterial export proteins, family 1 IX92_10690 PF01312 FlhB HrpN YscU SpaS Family IX92_10695 PF00771 FHIPEP family IX92_10705 PF00700 Bacterial flagellin C-terminal helical region IX92_10705 PF00669 Bacterial flagellin N-terminal helical region IX92_10710 PF07196 Flagellin hook IN motif IX92_10710 PF02465 Flagellar hook-associated protein 2 N-terminus IX92_10710 PF07195 Flagellar hook-associated protein 2 C-terminus IX92_10715 PF02561 Flagellar protein FliS IX92_10730 PF03748 Flagellar basal body-associated protein FliL IX92_10735 PF04542 Sigma-70 region 2 IX92_10735 PF04545 Sigma-70, region 4 IX92_10740 PF01618 MotA/TolQ/ExbB proton channel family IX92_10745 PF13677 Membrane MotB of proton-channel complex MotA/MotB IX92_10745 PF00691 OmpA family IX92_10770 PF10135 Rod binding protein IX92_10770 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IX92_10775 PF02119 Flagellar P-ring protein IX92_10780 PF02107 Flagellar L-ring protein IX92_10785 PF00460 Flagella basal body rod protein IX92_10785 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IX92_10790 PF00460 Flagella basal body rod protein IX92_10790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IX92_10795 PF07559 Flagellar basal body protein FlaE IX92_10795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IX92_10795 PF00460 Flagella basal body rod protein IX92_10800 PF13861 FlgD Tudor-like domain IX92_10800 PF13860 FlgD Ig-like domain IX92_10800 PF03963 Flagellar hook capping protein - N-terminal region IX92_10805 PF00460 Flagella basal body rod protein IX92_10805 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IX92_10810 PF00460 Flagella basal body rod protein IX92_10830 PF01476 LysM domain IX92_10830 PF01464 Transglycosylase SLT domain IX92_10835 PF02508 Rnf-Nqr subunit, membrane protein IX92_10840 PF04060 Putative Fe-S cluster IX92_10845 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IX92_10845 PF13375 RnfC Barrel sandwich hybrid domain IX92_10845 PF12838 4Fe-4S dicluster domain IX92_10845 PF10531 SLBB domain IX92_10850 PF03116 NQR2, RnfD, RnfE family IX92_10865 PF10576 Iron-sulfur binding domain of endonuclease III IX92_10865 PF00633 Helix-hairpin-helix motif IX92_10865 PF00730 HhH-GPD superfamily base excision DNA repair protein IX92_10895 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain IX92_10895 PF14490 Helix-hairpin-helix containing domain IX92_10895 PF13538 UvrD-like helicase C-terminal domain IX92_10910 PF02311 AraC-like ligand binding domain IX92_10910 PF12833 Helix-turn-helix domain IX92_10915 PF02129 X-Pro dipeptidyl-peptidase (S15 family) IX92_10935 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IX92_10945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_10945 PF03466 LysR substrate binding domain IX92_10965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IX92_10970 PF10952 Protein of unknown function (DUF2753) IX92_10975 PF18393 MotY N-terminal domain IX92_10975 PF00691 OmpA family IX92_10980 PF00929 Exonuclease IX92_10985 PF13726 Na+-H+ antiporter family IX92_10985 PF03553 Na+/H+ antiporter family IX92_10995 PF00701 Dihydrodipicolinate synthetase family IX92_11000 PF01842 ACT domain IX92_11005 PF00578 AhpC/TSA family IX92_11010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_11010 PF00672 HAMP domain IX92_11010 PF02743 Cache domain IX92_11015 PF01594 AI-2E family transporter IX92_11025 PF13181 Tetratricopeptide repeat IX92_11025 PF01435 Peptidase family M48 IX92_11030 PF03960 ArsC family IX92_11035 PF03358 NADPH-dependent FMN reductase IX92_11050 PF00860 Permease family IX92_11055 PF04073 Aminoacyl-tRNA editing domain IX92_11060 PF02872 5'-nucleotidase, C-terminal domain IX92_11060 PF00149 Calcineurin-like phosphoesterase IX92_11065 PF00793 DAHP synthetase I family IX92_11070 PF13369 Transglutaminase-like superfamily IX92_11075 PF04247 Invasion gene expression up-regulator, SirB IX92_11080 PF17827 PrmC N-terminal domain IX92_11080 PF13847 Methyltransferase domain IX92_11085 PF00472 RF-1 domain IX92_11085 PF03462 PCRF domain IX92_11090 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IX92_11090 PF01488 Shikimate / quinate 5-dehydrogenase IX92_11090 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IX92_11095 PF03550 Outer membrane lipoprotein LolB IX92_11105 PF14572 Phosphoribosyl synthetase-associated domain IX92_11105 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IX92_11110 PF01195 Peptidyl-tRNA hydrolase IX92_11115 PF06071 Protein of unknown function (DUF933) IX92_11115 PF01926 50S ribosome-binding GTPase IX92_11225 PF00669 Bacterial flagellin N-terminal helical region IX92_11225 PF07196 Flagellin hook IN motif IX92_11225 PF00700 Bacterial flagellin C-terminal helical region IX92_11230 PF00669 Bacterial flagellin N-terminal helical region IX92_11230 PF00700 Bacterial flagellin C-terminal helical region IX92_11230 PF07196 Flagellin hook IN motif IX92_11235 PF00669 Bacterial flagellin N-terminal helical region IX92_11235 PF00700 Bacterial flagellin C-terminal helical region IX92_11240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IX92_11240 PF07196 Flagellin hook IN motif IX92_11245 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IX92_11245 PF10135 Rod binding protein IX92_11250 PF02119 Flagellar P-ring protein IX92_11255 PF02107 Flagellar L-ring protein IX92_11260 PF00460 Flagella basal body rod protein IX92_11260 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IX92_11265 PF00460 Flagella basal body rod protein IX92_11265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IX92_11270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IX92_11270 PF07559 Flagellar basal body protein FlaE IX92_11270 PF00460 Flagella basal body rod protein IX92_11275 PF03963 Flagellar hook capping protein - N-terminal region IX92_11275 PF13860 FlgD Ig-like domain IX92_11275 PF13861 FlgD Tudor-like domain IX92_11280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IX92_11280 PF00460 Flagella basal body rod protein IX92_11285 PF00460 Flagella basal body rod protein IX92_11290 PF03705 CheR methyltransferase, all-alpha domain IX92_11290 PF01739 CheR methyltransferase, SAM binding domain IX92_11295 PF00072 Response regulator receiver domain IX92_11295 PF01584 CheW-like domain IX92_11305 PF04316 Anti-sigma-28 factor, FlgM IX92_11345 PF05175 Methyltransferase small domain IX92_11355 PF08019 Phosphoethanolamine transferase EptA/EptB IX92_11355 PF00884 Sulfatase IX92_11370 PF01389 OmpA-like transmembrane domain IX92_11370 PF00691 OmpA family IX92_11380 PF00749 tRNA synthetases class I (E and Q), catalytic domain IX92_11390 PF13609 Gram-negative porin IX92_11395 PF00403 Heavy-metal-associated domain IX92_11415 PF00762 Ferrochelatase IX92_11420 PF05191 Adenylate kinase, active site lid IX92_11425 PF00183 Hsp90 protein IX92_11425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_11430 PF00486 Transcriptional regulatory protein, C terminal IX92_11435 PF17323 Trans-membrane regulatory protein ToxS IX92_11450 PF12850 Calcineurin-like phosphoesterase superfamily domain IX92_11465 PF07556 Protein of unknown function (DUF1538) IX92_11470 PF07556 Protein of unknown function (DUF1538) IX92_11475 PF01370 NAD dependent epimerase/dehydratase family IX92_11475 PF08338 Domain of unknown function (DUF1731) IX92_11480 PF00106 short chain dehydrogenase IX92_11485 PF00085 Thioredoxin IX92_11490 PF16200 C-terminal region of band_7 IX92_11490 PF01145 SPFH domain / Band 7 family IX92_11505 PF13609 Gram-negative porin IX92_11510 PF01653 NAD-dependent DNA ligase adenylation domain IX92_11510 PF03120 NAD-dependent DNA ligase OB-fold domain IX92_11510 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IX92_11510 PF12826 Helix-hairpin-helix motif IX92_11510 PF00533 BRCA1 C Terminus (BRCT) domain IX92_11515 PF04354 ZipA, C-terminal FtsZ-binding domain IX92_11525 PF00291 Pyridoxal-phosphate dependent enzyme IX92_11530 PF00381 PTS HPr component phosphorylation site IX92_11535 PF05524 PEP-utilising enzyme, N-terminal IX92_11535 PF02896 PEP-utilising enzyme, TIM barrel domain IX92_11535 PF00391 PEP-utilising enzyme, mobile domain IX92_11540 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IX92_11545 PF01494 FAD binding domain IX92_11550 PF01938 TRAM domain IX92_11550 PF00919 Uncharacterized protein family UPF0004 IX92_11550 PF04055 Radical SAM superfamily IX92_11555 PF02562 PhoH-like protein IX92_11560 PF02130 Uncharacterized protein family UPF0054 IX92_11565 PF00571 CBS domain IX92_11565 PF03471 Transporter associated domain IX92_11570 PF00795 Carbon-nitrogen hydrolase IX92_11575 PF07295 Zinc-ribbon containing domain IX92_11580 PF13603 Leucyl-tRNA synthetase, Domain 2 IX92_11580 PF08264 Anticodon-binding domain of tRNA IX92_11580 PF00133 tRNA synthetases class I (I, L, M and V) IX92_11585 PF04390 Lipopolysaccharide-assembly IX92_11590 PF14840 Processivity clamp loader gamma complex DNA pol III C-term IX92_11590 PF06144 DNA polymerase III, delta subunit IX92_11600 PF02590 Predicted SPOUT methyltransferase IX92_11605 PF00905 Penicillin binding protein transpeptidase domain IX92_11605 PF03717 Penicillin-binding Protein dimerisation domain IX92_11610 PF01098 Cell cycle protein IX92_11615 PF03330 Lytic transglycolase IX92_11615 PF05036 Sporulation related domain IX92_11620 PF00768 D-alanyl-D-alanine carboxypeptidase IX92_11620 PF07943 Penicillin-binding protein 5, C-terminal domain IX92_11625 PF04359 Protein of unknown function (DUF493) IX92_11630 PF03099 Biotin/lipoate A/B protein ligase family IX92_11635 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family IX92_11635 PF04055 Radical SAM superfamily IX92_11650 PF00464 Serine hydroxymethyltransferase IX92_11660 PF00873 AcrB/AcrD/AcrF family IX92_11665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IX92_11690 PF16657 Maltogenic Amylase, C-terminal domain IX92_11690 PF00128 Alpha amylase, catalytic domain IX92_11695 PF00367 phosphotransferase system, EIIB IX92_11695 PF02378 Phosphotransferase system, EIIC IX92_11700 PF00356 Bacterial regulatory proteins, lacI family IX92_11715 PF00005 ABC transporter IX92_11715 PF09383 NIL domain IX92_11720 PF00528 Binding-protein-dependent transport system inner membrane component IX92_11725 PF03180 NLPA lipoprotein IX92_11735 PF03806 AbgT putative transporter family IX92_11745 PF18389 TrmO C-terminal domain IX92_11745 PF01980 tRNA-methyltransferase O IX92_11750 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IX92_11750 PF03129 Anticodon binding domain IX92_11750 PF04073 Aminoacyl-tRNA editing domain IX92_11755 PF13230 Glutamine amidotransferases class-II IX92_11760 PF13580 SIS domain IX92_11765 PF09317 Domain of unknown function (DUF1974) IX92_11765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX92_11765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX92_11775 PF00929 Exonuclease IX92_11780 PF00075 RNase H IX92_11785 PF08241 Methyltransferase domain IX92_11795 PF01476 LysM domain IX92_11795 PF01464 Transglycosylase SLT domain IX92_11805 PF03372 Endonuclease/Exonuclease/phosphatase family IX92_11810 PF00543 Nitrogen regulatory protein P-II IX92_11815 PF00034 Cytochrome c IX92_11820 PF01171 PP-loop family IX92_11820 PF11734 TilS substrate C-terminal domain IX92_11820 PF09179 TilS substrate binding domain IX92_11825 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IX92_11830 PF01336 OB-fold nucleic acid binding domain IX92_11830 PF02811 PHP domain IX92_11830 PF14579 Helix-hairpin-helix motif IX92_11830 PF07733 Bacterial DNA polymerase III alpha NTPase domain IX92_11830 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IX92_11835 PF01351 Ribonuclease HII IX92_11840 PF02684 Lipid-A-disaccharide synthetase IX92_11845 PF00132 Bacterial transferase hexapeptide (six repeats) IX92_11845 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IX92_11850 PF07977 FabA-like domain IX92_11855 PF00132 Bacterial transferase hexapeptide (six repeats) IX92_11855 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IX92_11860 PF03938 Outer membrane protein (OmpH-like) IX92_11865 PF07244 Surface antigen variable number repeat IX92_11865 PF01103 Surface antigen IX92_11870 PF17820 PDZ domain IX92_11870 PF02163 Peptidase family M50 IX92_11875 PF13288 DXP reductoisomerase C-terminal domain IX92_11875 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IX92_11875 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IX92_11885 PF01255 Putative undecaprenyl diphosphate synthase IX92_11890 PF01765 Ribosome recycling factor IX92_11895 PF00696 Amino acid kinase family IX92_11900 PF00889 Elongation factor TS IX92_11905 PF00318 Ribosomal protein S2 IX92_11910 PF00557 Metallopeptidase family M24 IX92_11915 PF01842 ACT domain IX92_11915 PF08335 GlnD PII-uridylyltransferase IX92_11915 PF01966 HD domain IX92_11915 PF01909 Nucleotidyltransferase domain IX92_11920 PF11944 Protein of unknown function (DUF3461) IX92_11925 PF04608 Phosphatidylglycerophosphatase A IX92_11930 PF02769 AIR synthase related protein, C-terminal domain IX92_11930 PF00586 AIR synthase related protein, N-terminal domain IX92_11935 PF01029 NusB family IX92_11940 PF00885 6,7-dimethyl-8-ribityllumazine synthase IX92_11945 PF00925 GTP cyclohydrolase II IX92_11945 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IX92_11950 PF00677 Lumazine binding domain IX92_11955 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IX92_11955 PF01872 RibD C-terminal domain IX92_11960 PF03477 ATP cone domain IX92_11965 PF00171 Aldehyde dehydrogenase family IX92_11970 PF00696 Amino acid kinase family IX92_11970 PF01472 PUA domain IX92_11975 PF07417 Sigma factor-binding transcriptional regulator Crl IX92_11985 PF00156 Phosphoribosyl transferase domain IX92_11990 PF00860 Permease family IX92_11995 PF01546 Peptidase family M20/M25/M40 IX92_11995 PF07687 Peptidase dimerisation domain IX92_12000 PF08443 RimK-like ATP-grasp domain IX92_12000 PF18030 RimK PreATP-grasp domain IX92_12005 PF08443 RimK-like ATP-grasp domain IX92_12005 PF18030 RimK PreATP-grasp domain IX92_12015 PF00209 Sodium:neurotransmitter symporter family IX92_12020 PF06483 Chitinase C IX92_12020 PF00704 Glycosyl hydrolases family 18 IX92_12030 PF01272 Transcription elongation factor, GreA/GreB, C-term IX92_12030 PF03449 Transcription elongation factor, N-terminal IX92_12035 PF00570 HRDC domain IX92_12035 PF00271 Helicase conserved C-terminal domain IX92_12035 PF00270 DEAD/DEAH box helicase IX92_12035 PF09382 RQC domain IX92_12035 PF16124 RecQ zinc-binding IX92_12040 PF00817 impB/mucB/samB family IX92_12040 PF11799 impB/mucB/samB family C-terminal domain IX92_12040 PF11798 IMS family HHH motif IX92_12045 PF00990 Diguanylate cyclase, GGDEF domain IX92_12045 PF00072 Response regulator receiver domain IX92_12055 PF02424 ApbE family IX92_12060 PF00111 2Fe-2S iron-sulfur cluster binding domain IX92_12060 PF00970 Oxidoreductase FAD-binding domain IX92_12060 PF00175 Oxidoreductase NAD-binding domain IX92_12065 PF02508 Rnf-Nqr subunit, membrane protein IX92_12070 PF02508 Rnf-Nqr subunit, membrane protein IX92_12075 PF04205 FMN-binding domain IX92_12080 PF03116 NQR2, RnfD, RnfE family IX92_12085 PF11973 NQRA C-terminal domain IX92_12085 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) IX92_12090 PF01722 BolA-like protein IX92_12095 PF05175 Methyltransferase small domain IX92_12105 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IX92_12110 PF07690 Major Facilitator Superfamily IX92_12120 PF04542 Sigma-70 region 2 IX92_12120 PF04545 Sigma-70, region 4 IX92_12130 PF03502 Nucleoside-specific channel-forming protein, Tsx IX92_12135 PF08546 Ketopantoate reductase PanE/ApbA C terminal IX92_12135 PF02558 Ketopantoate reductase PanE/ApbA IX92_12140 PF01965 DJ-1/PfpI family IX92_12145 PF00266 Aminotransferase class-V IX92_12150 PF18073 Rubredoxin metal binding domain IX92_12160 PF18429 Domain of unknown function (DUF5609) IX92_12170 PF01048 Phosphorylase superfamily IX92_12175 PF01676 Metalloenzyme superfamily IX92_12180 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain IX92_12180 PF00591 Glycosyl transferase family, a/b domain IX92_12180 PF02885 Glycosyl transferase family, helical bundle domain IX92_12185 PF01791 DeoC/LacD family aldolase IX92_12195 PF07662 Na+ dependent nucleoside transporter C-terminus IX92_12195 PF07670 Nucleoside recognition IX92_12195 PF01773 Na+ dependent nucleoside transporter N-terminus IX92_12200 PF01026 TatD related DNase IX92_12205 PF03883 Peroxide stress protein YaaA IX92_12210 PF01235 Sodium:alanine symporter family IX92_12225 PF03167 Uracil DNA glycosylase superfamily IX92_12230 PF01261 Xylose isomerase-like TIM barrel IX92_12235 PF01228 Glycine radical IX92_12240 PF03466 LysR substrate binding domain IX92_12240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_12245 PF01925 Sulfite exporter TauE/SafE IX92_12250 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IX92_12250 PF02142 MGS-like domain IX92_12250 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IX92_12255 PF00117 Glutamine amidotransferase class-I IX92_12255 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IX92_12260 PF05173 Dihydrodipicolinate reductase, C-terminus IX92_12260 PF01113 Dihydrodipicolinate reductase, N-terminus IX92_12265 PF00293 NUDIX domain IX92_12270 PF02810 SEC-C motif IX92_12270 PF07517 SecA DEAD-like domain IX92_12270 PF07516 SecA Wing and Scaffold domain IX92_12270 PF01043 SecA preprotein cross-linking domain IX92_12275 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IX92_12280 PF12327 FtsZ family, C-terminal domain IX92_12280 PF00091 Tubulin/FtsZ family, GTPase domain IX92_12285 PF02491 SHS2 domain inserted in FTSA IX92_12290 PF03799 Cell division protein FtsQ IX92_12290 PF08478 POTRA domain, FtsQ-type IX92_12295 PF01225 Mur ligase family, catalytic domain IX92_12295 PF08245 Mur ligase middle domain IX92_12295 PF02875 Mur ligase family, glutamate ligase domain IX92_12300 PF04101 Glycosyltransferase family 28 C-terminal domain IX92_12300 PF03033 Glycosyltransferase family 28 N-terminal domain IX92_12305 PF01098 Cell cycle protein IX92_12310 PF08245 Mur ligase middle domain IX92_12310 PF02875 Mur ligase family, glutamate ligase domain IX92_12315 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 IX92_12315 PF00953 Glycosyl transferase family 4 IX92_12320 PF02875 Mur ligase family, glutamate ligase domain IX92_12320 PF01225 Mur ligase family, catalytic domain IX92_12320 PF08245 Mur ligase middle domain IX92_12325 PF02875 Mur ligase family, glutamate ligase domain IX92_12325 PF01225 Mur ligase family, catalytic domain IX92_12325 PF08245 Mur ligase middle domain IX92_12330 PF03717 Penicillin-binding Protein dimerisation domain IX92_12330 PF00905 Penicillin binding protein transpeptidase domain IX92_12335 PF04999 Cell division protein FtsL IX92_12340 PF01795 MraW methylase family IX92_12345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IX92_12350 PF04348 LppC putative lipoprotein IX92_12355 PF02021 Uncharacterised protein family UPF0102 IX92_12360 PF13580 SIS domain IX92_12365 PF04972 BON domain IX92_12370 PF04386 Stringent starvation protein B IX92_12375 PF02798 Glutathione S-transferase, N-terminal domain IX92_12375 PF00043 Glutathione S-transferase, C-terminal domain IX92_12380 PF02167 Cytochrome C1 family IX92_12385 PF00033 Cytochrome b/b6/petB IX92_12385 PF00032 Cytochrome b(C-terminal)/b6/petD IX92_12390 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal IX92_12390 PF00355 Rieske [2Fe-2S] domain IX92_12395 PF00380 Ribosomal protein S9/S16 IX92_12400 PF00572 Ribosomal protein L13 IX92_12405 PF03969 AFG1-like ATPase IX92_12410 PF06295 Protein of unknown function (DUF1043) IX92_12415 PF00595 PDZ domain IX92_12420 PF13180 PDZ domain IX92_12425 PF00521 DNA gyrase/topoisomerase IV, subunit A IX92_12425 PF03989 DNA gyrase C-terminal domain, beta-propeller IX92_12430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_12430 PF00986 DNA gyrase B subunit, carboxyl terminus IX92_12430 PF00204 DNA gyrase B IX92_12430 PF01751 Toprim domain IX92_12435 PF05728 Uncharacterised protein family (UPF0227) IX92_12440 PF00149 Calcineurin-like phosphoesterase IX92_12445 PF06853 Protein of unknown function (DUF1249) IX92_12450 PF00293 NUDIX domain IX92_12455 PF02321 Outer membrane efflux protein IX92_12465 PF01627 Hpt domain IX92_12465 PF00072 Response regulator receiver domain IX92_12465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_12465 PF18415 Histidine kinase receptor ArcB trans-membrane domain IX92_12465 PF00989 PAS fold IX92_12465 PF00512 His Kinase A (phospho-acceptor) domain IX92_12470 PF01590 GAF domain IX92_12470 PF00990 Diguanylate cyclase, GGDEF domain IX92_12470 PF00360 Phytochrome region IX92_12470 PF00563 EAL domain IX92_12475 PF16199 Radical_SAM C-terminal domain IX92_12475 PF04055 Radical SAM superfamily IX92_12480 PF01493 GXGXG motif IX92_12480 PF01645 Conserved region in glutamate synthase IX92_12480 PF00310 Glutamine amidotransferases class-II IX92_12480 PF04898 Glutamate synthase central domain IX92_12485 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX92_12485 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IX92_12490 PF00310 Glutamine amidotransferases class-II IX92_12490 PF01493 GXGXG motif IX92_12490 PF01645 Conserved region in glutamate synthase IX92_12490 PF04898 Glutamate synthase central domain IX92_12495 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IX92_12495 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX92_12505 PF01509 TruB family pseudouridylate synthase (N terminal domain) IX92_12505 PF16198 tRNA pseudouridylate synthase B C-terminal domain IX92_12505 PF09157 Pseudouridine synthase II TruB, C-terminal IX92_12510 PF02033 Ribosome-binding factor A IX92_12515 PF00009 Elongation factor Tu GTP binding domain IX92_12515 PF04760 Translation initiation factor IF-2, N-terminal region IX92_12515 PF08364 Bacterial translation initiation factor IF-2 associated region IX92_12515 PF11987 Translation-initiation factor 2 IX92_12520 PF00575 S1 RNA binding domain IX92_12520 PF08529 NusA N-terminal domain IX92_12520 PF13184 NusA-like KH domain IX92_12525 PF02576 RimP N-terminal domain IX92_12525 PF17384 RimP C-terminal SH3 domain IX92_12540 PF03840 Preprotein translocase SecG subunit IX92_12545 PF13508 Acetyltransferase (GNAT) domain IX92_12555 PF03707 Bacterial signalling protein N terminal repeat IX92_12555 PF00563 EAL domain IX92_12555 PF00990 Diguanylate cyclase, GGDEF domain IX92_12570 PF00152 tRNA synthetases class II (D, K and N) IX92_12570 PF01336 OB-fold nucleic acid binding domain IX92_12575 PF00472 RF-1 domain IX92_12575 PF03462 PCRF domain IX92_12580 PF05525 Branched-chain amino acid transport protein IX92_12585 PF05175 Methyltransferase small domain IX92_12590 PF00270 DEAD/DEAH box helicase IX92_12590 PF00271 Helicase conserved C-terminal domain IX92_12595 PF03144 Elongation factor Tu domain 2 IX92_12595 PF00009 Elongation factor Tu GTP binding domain IX92_12595 PF16658 Class II release factor RF3, C-terminal domain IX92_12600 PF00563 EAL domain IX92_12600 PF00990 Diguanylate cyclase, GGDEF domain IX92_12600 PF03707 Bacterial signalling protein N terminal repeat IX92_12615 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IX92_12615 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IX92_12615 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IX92_12615 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IX92_12620 PF00809 Pterin binding enzyme IX92_12625 PF00004 ATPase family associated with various cellular activities (AAA) IX92_12625 PF17862 AAA+ lid domain IX92_12625 PF06480 FtsH Extracellular IX92_12625 PF01434 Peptidase family M41 IX92_12630 PF01728 FtsJ-like methyltransferase IX92_12635 PF01985 CRS1 / YhbY (CRM) domain IX92_12640 PF03449 Transcription elongation factor, N-terminal IX92_12640 PF01272 Transcription elongation factor, GreA/GreB, C-term IX92_12645 PF13609 Gram-negative porin IX92_12650 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family IX92_12660 PF00579 tRNA synthetases class I (W and Y) IX92_12665 PF01476 LysM domain IX92_12665 PF08525 Opacity-associated protein A N-terminal motif IX92_12665 PF01551 Peptidase family M23 IX92_12670 PF00873 AcrB/AcrD/AcrF family IX92_12675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IX92_12675 PF00529 HlyD membrane-fusion protein of T1SS IX92_12685 PF00202 Aminotransferase class-III IX92_12690 PF01594 AI-2E family transporter IX92_12695 PF05175 Methyltransferase small domain IX92_12695 PF08468 Methyltransferase small domain N-terminal IX92_12700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_12700 PF00072 Response regulator receiver domain IX92_12700 PF00512 His Kinase A (phospho-acceptor) domain IX92_12700 PF09308 LuxQ, periplasmic IX92_12705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX92_12710 PF00528 Binding-protein-dependent transport system inner membrane component IX92_12715 PF12911 N-terminal TM domain of oligopeptide transport permease C IX92_12715 PF00528 Binding-protein-dependent transport system inner membrane component IX92_12720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX92_12720 PF00005 ABC transporter IX92_12725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX92_12725 PF00005 ABC transporter IX92_12735 PF01869 BadF/BadG/BcrA/BcrD ATPase family IX92_12740 PF00728 Glycosyl hydrolase family 20, catalytic domain IX92_12740 PF02838 Glycosyl hydrolase family 20, domain 2 IX92_12745 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain IX92_12745 PF06165 Glycosyltransferase family 36 IX92_12750 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IX92_12750 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IX92_12750 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IX92_12750 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IX92_12755 PF08402 TOBE domain IX92_12755 PF00005 ABC transporter IX92_12765 PF13416 Bacterial extracellular solute-binding protein IX92_12770 PF00909 Ammonium Transporter Family IX92_12775 PF00543 Nitrogen regulatory protein P-II IX92_12780 PF06062 Uncharacterised protein family (UPF0231) IX92_12785 PF00330 Aconitase family (aconitate hydratase) IX92_12785 PF06434 Aconitate hydratase 2 N-terminus IX92_12785 PF11791 Aconitate B N-terminal domain IX92_12790 PF01734 Patatin-like phospholipase IX92_12795 PF14814 Bifunctional transglycosylase second domain IX92_12795 PF00905 Penicillin binding protein transpeptidase domain IX92_12795 PF00912 Transglycosylase IX92_12800 PF00270 DEAD/DEAH box helicase IX92_12800 PF04408 Helicase associated domain (HA2) IX92_12800 PF00271 Helicase conserved C-terminal domain IX92_12800 PF08482 ATP-dependent helicase C-terminal IX92_12805 PF03749 Sugar fermentation stimulation protein RE domain IX92_12805 PF17746 SfsA N-terminal OB domain IX92_12810 PF01258 Prokaryotic dksA/traR C4-type zinc finger IX92_12815 PF00749 tRNA synthetases class I (E and Q), catalytic domain IX92_12820 PF12627 Probable RNA and SrmB- binding site of polymerase A IX92_12820 PF12626 Polymerase A arginine-rich C-terminus IX92_12820 PF01743 Poly A polymerase head domain IX92_12825 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IX92_12830 PF02548 Ketopantoate hydroxymethyltransferase IX92_12835 PF02569 Pantoate-beta-alanine ligase IX92_12840 PF01061 ABC-2 type transporter IX92_12845 PF00005 ABC transporter IX92_12850 PF01740 STAS domain IX92_12850 PF00916 Sulfate permease family IX92_12855 PF00484 Carbonic anhydrase IX92_12860 PF00156 Phosphoribosyl transferase domain IX92_12865 PF00440 Bacterial regulatory proteins, tetR family IX92_12870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IX92_12870 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX92_12875 PF00364 Biotin-requiring enzyme IX92_12875 PF02817 e3 binding domain IX92_12875 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IX92_12880 PF00456 Transketolase, thiamine diphosphate binding domain IX92_12880 PF17831 Pyruvate dehydrogenase E1 component middle domain IX92_12885 PF07729 FCD domain IX92_12885 PF00392 Bacterial regulatory proteins, gntR family IX92_12895 PF17768 RecJ OB domain IX92_12895 PF01368 DHH family IX92_12895 PF02272 DHHA1 domain IX92_12900 PF13098 Thioredoxin-like domain IX92_12900 PF10411 Disulfide bond isomerase protein N-terminus IX92_12905 PF02899 Phage integrase, N-terminal SAM-like domain IX92_12905 PF00589 Phage integrase family IX92_12910 PF00258 Flavodoxin IX92_12915 PF01510 N-acetylmuramoyl-L-alanine amidase IX92_12920 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IX92_12920 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IX92_12925 PF07963 Prokaryotic N-terminal methylation motif IX92_12930 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IX92_12930 PF00437 Type II/IV secretion system protein IX92_12935 PF00482 Type II secretion system (T2SS), protein F IX92_12940 PF06750 Bacterial Peptidase A24 N-terminal domain IX92_12940 PF01478 Type IV leader peptidase family IX92_12945 PF01121 Dephospho-CoA kinase IX92_12950 PF07072 Cell division protein IX92_12955 PF03884 DNA gyrase inhibitor YacG IX92_12960 PF01245 Ribosomal protein L19 IX92_12965 PF01746 tRNA (Guanine-1)-methyltransferase IX92_12970 PF01782 RimM N-terminal domain IX92_12970 PF05239 PRC-barrel domain IX92_12975 PF00886 Ribosomal protein S16 IX92_12980 PF02978 Signal peptide binding domain IX92_12980 PF00448 SRP54-type protein, GTPase domain IX92_12980 PF02881 SRP54-type protein, helical bundle domain IX92_12985 PF01578 Cytochrome C assembly protein IX92_12990 PF00571 CBS domain IX92_12990 PF03471 Transporter associated domain IX92_12990 PF01595 Cyclin M transmembrane N-terminal domain IX92_12995 PF04542 Sigma-70 region 2 IX92_12995 PF04539 Sigma-70 region 3 IX92_12995 PF00140 Sigma-70 factor, region 1.2 IX92_12995 PF04545 Sigma-70, region 4 IX92_13000 PF01476 LysM domain IX92_13000 PF01551 Peptidase family M23 IX92_13010 PF01975 Survival protein SurE IX92_13015 PF01142 tRNA pseudouridine synthase D (TruD) IX92_13020 PF02542 YgbB family IX92_13025 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IX92_13030 PF04977 Septum formation initiator IX92_13040 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IX92_13045 PF02152 Dihydroneopterin aldolase IX92_13050 PF02660 Glycerol-3-phosphate acyltransferase IX92_13055 PF00561 alpha/beta hydrolase fold IX92_13060 PF00814 Glycoprotease family IX92_13065 PF01165 Ribosomal protein S21 IX92_13070 PF09424 Yqey-like protein IX92_13075 PF01807 CHC2 zinc finger IX92_13075 PF08275 DNA primase catalytic core, N-terminal domain IX92_13075 PF08278 DNA primase DnaG DnaB-binding IX92_13075 PF10410 DnaB-helicase binding domain of primase IX92_13080 PF04539 Sigma-70 region 3 IX92_13080 PF04546 Sigma-70, non-essential region IX92_13080 PF03979 Sigma-70 factor, region 1.1 IX92_13080 PF00140 Sigma-70 factor, region 1.2 IX92_13080 PF04542 Sigma-70 region 2 IX92_13080 PF04545 Sigma-70, region 4 IX92_13090 PF05099 Tellurite resistance protein TerB IX92_13090 PF00226 DnaJ domain IX92_13095 PF03968 OstA-like protein IX92_13095 PF04453 LPS transport system D IX92_13100 PF09312 SurA N-terminal domain IX92_13105 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IX92_13110 PF00398 Ribosomal RNA adenine dimethylase IX92_13115 PF04379 ApaG domain IX92_13120 PF00149 Calcineurin-like phosphoesterase IX92_13125 PF00186 Dihydrofolate reductase IX92_13130 PF12821 Threonine/Serine exporter, ThrE IX92_13135 PF06738 Putative threonine/serine exporter IX92_13140 PF01018 GTP1/OBG IX92_13140 PF01926 50S ribosome-binding GTPase IX92_13145 PF01016 Ribosomal L27 protein IX92_13150 PF00829 Ribosomal prokaryotic L21 protein IX92_13155 PF00348 Polyprenyl synthetase IX92_13165 PF03480 Bacterial extracellular solute-binding protein, family 7 IX92_13170 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IX92_13170 PF02378 Phosphotransferase system, EIIC IX92_13170 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IX92_13175 PF01232 Mannitol dehydrogenase Rossmann domain IX92_13175 PF08125 Mannitol dehydrogenase C-terminal domain IX92_13180 PF05068 Mannitol repressor IX92_13185 PF13419 Haloacid dehalogenase-like hydrolase IX92_13190 PF01380 SIS domain IX92_13195 PF00455 DeoR C terminal sensor domain IX92_13195 PF08220 DeoR-like helix-turn-helix domain IX92_13200 PF02887 Pyruvate kinase, alpha/beta domain IX92_13200 PF00224 Pyruvate kinase, barrel domain IX92_13210 PF17158 Membrane-associated sensor, integral membrane domain IX92_13210 PF00990 Diguanylate cyclase, GGDEF domain IX92_13215 PF04402 Protein of unknown function (DUF541) IX92_13220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_13220 PF03466 LysR substrate binding domain IX92_13225 PF01810 LysE type translocator IX92_13230 PF03129 Anticodon binding domain IX92_13230 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IX92_13230 PF04073 Aminoacyl-tRNA editing domain IX92_13235 PF05552 Conserved TM helix IX92_13235 PF00924 Mechanosensitive ion channel IX92_13240 PF01116 Fructose-bisphosphate aldolase class-II IX92_13245 PF00162 Phosphoglycerate kinase IX92_13250 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IX92_13250 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IX92_13255 PF00456 Transketolase, thiamine diphosphate binding domain IX92_13255 PF02780 Transketolase, C-terminal domain IX92_13255 PF02779 Transketolase, pyrimidine binding domain IX92_13260 PF02773 S-adenosylmethionine synthetase, C-terminal domain IX92_13260 PF02772 S-adenosylmethionine synthetase, central domain IX92_13260 PF00438 S-adenosylmethionine synthetase, N-terminal domain IX92_13270 PF10263 SprT-like family IX92_13270 PF17283 SprT-like zinc ribbon domain IX92_13275 PF04231 Endonuclease I IX92_13280 PF04452 RNA methyltransferase IX92_13285 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IX92_13285 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IX92_13290 PF02622 Uncharacterized ACR, COG1678 IX92_13295 PF03652 Holliday junction resolvase IX92_13300 PF00437 Type II/IV secretion system protein IX92_13305 PF00437 Type II/IV secretion system protein IX92_13310 PF01168 Alanine racemase, N-terminal domain IX92_13315 PF03807 NADP oxidoreductase coenzyme F420-dependent IX92_13315 PF14748 Pyrroline-5-carboxylate reductase dimerisation IX92_13320 PF02325 YGGT family IX92_13325 PF02594 Uncharacterised ACR, YggU family COG1872 IX92_13335 PF01725 Ham1 family IX92_13340 PF06969 HemN C-terminal domain IX92_13340 PF04055 Radical SAM superfamily IX92_13345 PF04960 Glutaminase IX92_13350 PF02390 Putative methyltransferase IX92_13355 PF00730 HhH-GPD superfamily base excision DNA repair protein IX92_13355 PF14815 NUDIX domain IX92_13355 PF00633 Helix-hairpin-helix motif IX92_13360 PF04362 Bacterial Fe(2+) trafficking IX92_13365 PF01464 Transglycosylase SLT domain IX92_13365 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain IX92_13415 PF01523 Putative modulator of DNA gyrase IX92_13420 PF00795 Carbon-nitrogen hydrolase IX92_13425 PF13502 AsmA-like C-terminal region IX92_13425 PF13116 Protein of unknown function IX92_13430 PF10150 Ribonuclease E/G family IX92_13430 PF00575 S1 RNA binding domain IX92_13435 PF02545 Maf-like protein IX92_13440 PF04093 rod shape-determining protein MreD IX92_13445 PF04085 rod shape-determining protein MreC IX92_13485 PF00114 Pilin (bacterial filament) IX92_13485 PF07963 Prokaryotic N-terminal methylation motif IX92_13495 PF00482 Type II secretion system (T2SS), protein F IX92_13500 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IX92_13500 PF00437 Type II/IV secretion system protein IX92_13510 PF01471 Putative peptidoglycan binding domain IX92_13510 PF13401 AAA domain IX92_13515 PF03958 Bacterial type II/III secretion system short domain IX92_13515 PF00263 Bacterial type II and III secretion system protein IX92_13535 PF17157 Gammaproteobacterial periplasmic sensor domain IX92_13535 PF00990 Diguanylate cyclase, GGDEF domain IX92_13535 PF00563 EAL domain IX92_13540 PF00436 Single-strand binding protein family IX92_13545 PF00196 Bacterial regulatory proteins, luxR family IX92_13550 PF00483 Nucleotidyl transferase IX92_13555 PF00005 ABC transporter IX92_13555 PF17755 UvrA DNA-binding domain IX92_13555 PF17760 UvrA interaction domain IX92_13565 PF00266 Aminotransferase class-V IX92_13570 PF00696 Amino acid kinase family IX92_13570 PF01842 ACT domain IX92_13575 PF01523 Putative modulator of DNA gyrase IX92_13580 PF04751 Protein of unknown function (DUF615) IX92_13585 PF00005 ABC transporter IX92_13590 PF00528 Binding-protein-dependent transport system inner membrane component IX92_13600 PF02441 Flavoprotein IX92_13605 PF01225 Mur ligase family, catalytic domain IX92_13605 PF08245 Mur ligase middle domain IX92_13605 PF02875 Mur ligase family, glutamate ligase domain IX92_13610 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain IX92_13615 PF00719 Inorganic pyrophosphatase IX92_13620 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like IX92_13625 PF04357 TamB, inner membrane protein subunit of TAM complex IX92_13630 PF01103 Surface antigen IX92_13630 PF17243 POTRA domain TamA domain 1 IX92_13630 PF07244 Surface antigen variable number repeat IX92_13635 PF01625 Peptide methionine sulfoxide reductase IX92_13645 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) IX92_13660 PF00005 ABC transporter IX92_13680 PF00342 Phosphoglucose isomerase IX92_13685 PF01894 Uncharacterised protein family UPF0047 IX92_13690 PF01168 Alanine racemase, N-terminal domain IX92_13690 PF00842 Alanine racemase, C-terminal domain IX92_13695 PF00772 DnaB-like helicase N terminal domain IX92_13695 PF03796 DnaB-like helicase C terminal domain IX92_13705 PF01281 Ribosomal protein L9, N-terminal domain IX92_13705 PF03948 Ribosomal protein L9, C-terminal domain IX92_13710 PF01084 Ribosomal protein S18 IX92_13715 PF01250 Ribosomal protein S6 IX92_13720 PF00210 Ferritin-like domain IX92_13725 PF04324 BFD-like [2Fe-2S] binding domain IX92_13730 PF00009 Elongation factor Tu GTP binding domain IX92_13730 PF03143 Elongation factor Tu C-terminal domain IX92_13730 PF03144 Elongation factor Tu domain 2 IX92_13735 PF03144 Elongation factor Tu domain 2 IX92_13735 PF14492 Elongation Factor G, domain II IX92_13735 PF00009 Elongation factor Tu GTP binding domain IX92_13735 PF03764 Elongation factor G, domain IV IX92_13735 PF00679 Elongation factor G C-terminus IX92_13740 PF00177 Ribosomal protein S7p/S5e IX92_13745 PF00164 Ribosomal protein S12/S23 IX92_13750 PF04077 DsrH like protein IX92_13755 PF02635 DsrE/DsrF-like family IX92_13760 PF02635 DsrE/DsrF-like family IX92_13765 PF13309 HTH domain IX92_13765 PF08348 YheO-like PAS domain IX92_13770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IX92_13770 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IX92_13785 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) IX92_13790 PF01145 SPFH domain / Band 7 family IX92_13795 PF12221 Bacterial membrane protein N terminal IX92_13795 PF01145 SPFH domain / Band 7 family IX92_13800 PF01926 50S ribosome-binding GTPase IX92_13800 PF13167 GTP-binding GTPase N-terminal IX92_13800 PF16360 GTP-binding GTPase Middle Region IX92_13805 PF17209 Hfq protein IX92_13815 PF08676 MutL C terminal dimerisation domain IX92_13815 PF01119 DNA mismatch repair protein, C-terminal domain IX92_13820 PF01520 N-acetylmuramoyl-L-alanine amidase IX92_13825 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IX92_13830 PF08331 Domain of unknown function (DUF1730) IX92_13885 PF00929 Exonuclease IX92_13890 PF03193 RsgA GTPase IX92_13895 PF02666 Phosphatidylserine decarboxylase IX92_13900 PF02080 TrkA-C domain IX92_13900 PF03600 Citrate transporter IX92_13905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_13905 PF17200 Single Cache domain 2 IX92_13905 PF00672 HAMP domain IX92_13915 PF01676 Metalloenzyme superfamily IX92_13915 PF06415 BPG-independent PGAM N-terminus (iPGM_N) IX92_13920 PF01551 Peptidase family M23 IX92_13930 PF00440 Bacterial regulatory proteins, tetR family IX92_13930 PF08360 QacR-like protein, C-terminal region IX92_13935 PF01208 Uroporphyrinogen decarboxylase (URO-D) IX92_13940 PF00293 NUDIX domain IX92_13940 PF09297 NADH pyrophosphatase zinc ribbon domain IX92_13945 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ IX92_13950 PF01797 Transposase IS200 like IX92_13955 PF01797 Transposase IS200 like IX92_13960 PF05000 RNA polymerase Rpb1, domain 4 IX92_13960 PF04983 RNA polymerase Rpb1, domain 3 IX92_13960 PF00623 RNA polymerase Rpb1, domain 2 IX92_13960 PF04997 RNA polymerase Rpb1, domain 1 IX92_13960 PF04998 RNA polymerase Rpb1, domain 5 IX92_13965 PF04561 RNA polymerase Rpb2, domain 2 IX92_13965 PF04560 RNA polymerase Rpb2, domain 7 IX92_13965 PF00562 RNA polymerase Rpb2, domain 6 IX92_13965 PF10385 RNA polymerase beta subunit external 1 domain IX92_13965 PF04565 RNA polymerase Rpb2, domain 3 IX92_13965 PF04563 RNA polymerase beta subunit IX92_13970 PF00542 Ribosomal protein L7/L12 C-terminal domain IX92_13970 PF16320 Ribosomal protein L7/L12 dimerisation domain IX92_13975 PF00466 Ribosomal protein L10 IX92_13980 PF00687 Ribosomal protein L1p/L10e family IX92_13985 PF00298 Ribosomal protein L11, RNA binding domain IX92_13985 PF03946 Ribosomal protein L11, N-terminal domain IX92_13990 PF00467 KOW motif IX92_13990 PF02357 Transcription termination factor nusG IX92_13995 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IX92_14005 PF03144 Elongation factor Tu domain 2 IX92_14005 PF00009 Elongation factor Tu GTP binding domain IX92_14005 PF03143 Elongation factor Tu C-terminal domain IX92_14030 PF00485 Phosphoribulokinase / Uridine kinase family IX92_14045 PF00121 Triosephosphate isomerase IX92_14050 PF01554 MatE IX92_14055 PF03737 Aldolase/RraA IX92_14060 PF01040 UbiA prenyltransferase family IX92_14065 PF01132 Elongation factor P (EF-P) OB domain IX92_14065 PF08207 Elongation factor P (EF-P) KOW-like domain IX92_14065 PF09285 Elongation factor P, C-terminal IX92_14070 PF04055 Radical SAM superfamily IX92_14080 PF02308 MgtC family IX92_14085 PF00365 Phosphofructokinase IX92_14090 PF01545 Cation efflux family IX92_14090 PF16916 Dimerisation domain of Zinc Transporter IX92_14095 PF07813 LTXXQ motif family protein IX92_14100 PF00486 Transcriptional regulatory protein, C terminal IX92_14100 PF00072 Response regulator receiver domain IX92_14105 PF00512 His Kinase A (phospho-acceptor) domain IX92_14105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_14105 PF00672 HAMP domain IX92_14105 PF16527 Two-component sensor protein CpxA, periplasmic domain IX92_14110 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IX92_14110 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IX92_14115 PF00588 SpoU rRNA Methylase family IX92_14120 PF00579 tRNA synthetases class I (W and Y) IX92_14125 PF13419 Haloacid dehalogenase-like hydrolase IX92_14130 PF00834 Ribulose-phosphate 3 epimerase family IX92_14135 PF02086 D12 class N6 adenine-specific DNA methyltransferase IX92_14150 PF01202 Shikimate kinase IX92_14180 PF17092 Penicillin-binding protein OB-like domain IX92_14180 PF00912 Transglycosylase IX92_14180 PF00905 Penicillin binding protein transpeptidase domain IX92_14185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_14185 PF03466 LysR substrate binding domain IX92_14190 PF08534 Redoxin IX92_14190 PF00462 Glutaredoxin IX92_14195 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX92_14195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IX92_14200 PF01042 Endoribonuclease L-PSP IX92_14205 PF00583 Acetyltransferase (GNAT) family IX92_14205 PF00206 Lyase IX92_14205 PF14698 Argininosuccinate lyase C-terminal IX92_14210 PF00764 Arginosuccinate synthase IX92_14215 PF00696 Amino acid kinase family IX92_14220 PF02774 Semialdehyde dehydrogenase, dimerisation domain IX92_14220 PF01118 Semialdehyde dehydrogenase, NAD binding domain IX92_14225 PF07687 Peptidase dimerisation domain IX92_14225 PF01546 Peptidase family M20/M25/M40 IX92_14315 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IX92_14315 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IX92_14320 PF00667 FAD binding domain IX92_14320 PF00258 Flavodoxin IX92_14320 PF00175 Oxidoreductase NAD-binding domain IX92_14340 PF01207 Dihydrouridine synthase (Dus) IX92_14465 PF00072 Response regulator receiver domain IX92_14470 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IX92_14470 PF00072 Response regulator receiver domain IX92_14470 PF01627 Hpt domain IX92_14470 PF00512 His Kinase A (phospho-acceptor) domain IX92_14470 PF00672 HAMP domain IX92_14470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_14475 PF01475 Ferric uptake regulator family IX92_14490 PF03600 Citrate transporter IX92_14490 PF02080 TrkA-C domain IX92_14495 PF00009 Elongation factor Tu GTP binding domain IX92_14500 PF01507 Phosphoadenosine phosphosulfate reductase family IX92_14505 PF10414 Sirohaem synthase dimerisation region IX92_14505 PF14824 Sirohaem biosynthesis protein central IX92_14505 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IX92_14510 PF02872 5'-nucleotidase, C-terminal domain IX92_14510 PF00149 Calcineurin-like phosphoesterase IX92_14520 PF13673 Acetyltransferase (GNAT) domain IX92_14535 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IX92_14535 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IX92_14545 PF01196 Ribosomal protein L17 IX92_14555 PF01479 S4 domain IX92_14555 PF00163 Ribosomal protein S4/S9 N-terminal domain IX92_14560 PF00411 Ribosomal protein S11 IX92_14565 PF00416 Ribosomal protein S13/S18 IX92_14570 PF00444 Ribosomal protein L36 IX92_14575 PF00344 SecY translocase IX92_14585 PF00327 Ribosomal protein L30p/L7e IX92_14590 PF00333 Ribosomal protein S5, N-terminal domain IX92_14590 PF03719 Ribosomal protein S5, C-terminal domain IX92_14595 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IX92_14600 PF00347 Ribosomal protein L6 IX92_14605 PF00410 Ribosomal protein S8 IX92_14610 PF00253 Ribosomal protein S14p/S29e IX92_14615 PF00281 Ribosomal protein L5 IX92_14615 PF00673 ribosomal L5P family C-terminus IX92_14620 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IX92_14620 PF00467 KOW motif IX92_14625 PF00238 Ribosomal protein L14p/L23e IX92_14630 PF00366 Ribosomal protein S17 IX92_14635 PF00831 Ribosomal L29 protein IX92_14640 PF00252 Ribosomal protein L16p/L10e IX92_14645 PF07650 KH domain IX92_14645 PF00189 Ribosomal protein S3, C-terminal domain IX92_14650 PF00237 Ribosomal protein L22p/L17e IX92_14655 PF00203 Ribosomal protein S19 IX92_14660 PF03947 Ribosomal Proteins L2, C-terminal domain IX92_14660 PF00181 Ribosomal Proteins L2, RNA binding domain IX92_14665 PF00276 Ribosomal protein L23 IX92_14670 PF00573 Ribosomal protein L4/L1 family IX92_14680 PF00338 Ribosomal protein S10p/S20e IX92_14685 PF08032 RNA 2'-O ribose methyltransferase substrate binding IX92_14685 PF00588 SpoU rRNA Methylase family IX92_14690 PF00773 RNB domain IX92_14690 PF17876 Cold shock domain IX92_14690 PF08461 Ribonuclease R winged-helix domain IX92_14690 PF08206 Ribonuclease B OB domain IX92_14690 PF00575 S1 RNA binding domain IX92_14695 PF01979 Amidohydrolase family IX92_14700 PF08238 Sel1 repeat IX92_14705 PF00709 Adenylosuccinate synthetase IX92_14710 PF01112 Asparaginase IX92_14715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IX92_14725 PF00999 Sodium/hydrogen exchanger family IX92_14725 PF02254 TrkA-N domain IX92_14730 PF02525 Flavodoxin-like fold IX92_14735 PF00005 ABC transporter IX92_14735 PF12848 ABC transporter IX92_14745 PF00561 alpha/beta hydrolase fold IX92_14750 PF06794 Uncharacterised protein family (UPF0270) IX92_14755 PF00485 Phosphoribulokinase / Uridine kinase family IX92_14760 PF00027 Cyclic nucleotide-binding domain IX92_14760 PF13545 Crp-like helix-turn-helix domain IX92_14775 PF04958 Arginine N-succinyltransferase beta subunit IX92_14780 PF00202 Aminotransferase class-III IX92_14785 PF00117 Glutamine amidotransferase class-I IX92_14810 PF13332 Hemagglutinin repeat IX92_14810 PF04829 Pre-toxin domain with VENN motif IX92_14810 PF13018 Extended Signal Peptide of Type V secretion system IX92_14810 PF05860 haemagglutination activity domain IX92_14815 PF05594 Haemagluttinin repeat IX92_14815 PF04829 Pre-toxin domain with VENN motif IX92_14815 PF15526 Novel toxin 21 IX92_14815 PF05860 haemagglutination activity domain IX92_14815 PF13332 Hemagglutinin repeat IX92_14830 PF04186 FxsA cytoplasmic membrane protein IX92_14835 PF10415 Fumarase C C-terminus IX92_14835 PF00206 Lyase IX92_14840 PF03605 Anaerobic c4-dicarboxylate membrane transporter IX92_14845 PF03606 C4-dicarboxylate anaerobic carrier IX92_14855 PF00696 Amino acid kinase family IX92_14860 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IX92_14860 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IX92_14865 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IX92_14865 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IX92_14870 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain IX92_14870 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain IX92_14875 PF02863 Arginine repressor, C-terminal domain IX92_14875 PF01316 Arginine repressor, DNA binding domain IX92_14880 PF11412 Disulphide bond corrector protein DsbC IX92_14880 PF02683 Cytochrome C biogenesis protein transmembrane region IX92_14885 PF00196 Bacterial regulatory proteins, luxR family IX92_14885 PF00072 Response regulator receiver domain IX92_14890 PF01914 MarC family integral membrane protein IX92_14900 PF00474 Sodium:solute symporter family IX92_14910 PF00072 Response regulator receiver domain IX92_14910 PF09308 LuxQ, periplasmic IX92_14910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_14910 PF00512 His Kinase A (phospho-acceptor) domain IX92_14915 PF12832 MFS_1 like family IX92_14930 PF16177 Acetyl-coenzyme A synthetase N-terminus IX92_14930 PF00501 AMP-binding enzyme IX92_14930 PF13193 AMP-binding enzyme C-terminal domain IX92_14935 PF01220 Dehydroquinase class II IX92_14940 PF00364 Biotin-requiring enzyme IX92_14945 PF00289 Biotin carboxylase, N-terminal domain IX92_14945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IX92_14945 PF02785 Biotin carboxylase C-terminal domain IX92_14955 PF01207 Dihydrouridine synthase (Dus) IX92_14960 PF02954 Bacterial regulatory protein, Fis family IX92_14965 PF05230 MASE2 domain IX92_14965 PF00990 Diguanylate cyclase, GGDEF domain IX92_14970 PF13411 MerR HTH family regulatory protein IX92_14975 PF01808 AICARFT/IMPCHase bienzyme IX92_14975 PF02142 MGS-like domain IX92_14980 PF02844 Phosphoribosylglycinamide synthetase, N domain IX92_14980 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IX92_14980 PF02843 Phosphoribosylglycinamide synthetase, C domain IX92_14990 PF00216 Bacterial DNA-binding protein IX92_14995 PF01595 Cyclin M transmembrane N-terminal domain IX92_14995 PF00571 CBS domain IX92_15000 PF04222 Protein of unknown function (DUF416) IX92_15005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IX92_15010 PF03167 Uracil DNA glycosylase superfamily IX92_15015 PF00311 Phosphoenolpyruvate carboxylase IX92_15020 PF03551 Transcriptional regulator PadR-like family IX92_15020 PF10400 Virulence activator alpha C-term IX92_15025 PF00132 Bacterial transferase hexapeptide (six repeats) IX92_15025 PF06426 Serine acetyltransferase, N-terminal IX92_15030 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IX92_15030 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IX92_15035 PF02556 Preprotein translocase subunit SecB IX92_15040 PF00581 Rhodanese-like domain IX92_15045 PF00152 tRNA synthetases class II (D, K and N) IX92_15050 PF00890 FAD binding domain IX92_15050 PF02910 Fumarate reductase flavoprotein C-term IX92_15055 PF13183 4Fe-4S dicluster domain IX92_15055 PF13085 2Fe-2S iron-sulfur cluster binding domain IX92_15060 PF02300 Fumarate reductase subunit C IX92_15065 PF02313 Fumarate reductase subunit D IX92_15075 PF07724 AAA domain (Cdc48 subfamily) IX92_15075 PF00004 ATPase family associated with various cellular activities (AAA) IX92_15085 PF05036 Sporulation related domain IX92_15090 PF00356 Bacterial regulatory proteins, lacI family IX92_15095 PF00271 Helicase conserved C-terminal domain IX92_15095 PF18074 Primosomal protein N C-terminal domain IX92_15095 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IX92_15095 PF00270 DEAD/DEAH box helicase IX92_15095 PF17764 3′ DNA-binding domain (3′BD) IX92_15100 PF01197 Ribosomal protein L31 IX92_15105 PF00390 Malic enzyme, N-terminal domain IX92_15105 PF03949 Malic enzyme, NAD binding domain IX92_15115 PF01053 Cys/Met metabolism PLP-dependent enzyme IX92_15120 PF00742 Homoserine dehydrogenase IX92_15120 PF00696 Amino acid kinase family IX92_15120 PF03447 Homoserine dehydrogenase, NAD binding domain IX92_15125 PF02219 Methylenetetrahydrofolate reductase IX92_15135 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded IX92_15140 PF00118 TCP-1/cpn60 chaperonin family IX92_15145 PF00166 Chaperonin 10 Kd subunit IX92_15160 PF01565 FAD binding domain IX92_15160 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IX92_15165 PF02237 Biotin protein ligase C terminal domain IX92_15165 PF03099 Biotin/lipoate A/B protein ligase family IX92_15165 PF08279 HTH domain IX92_15170 PF13091 PLD-like domain IX92_15175 PF02719 Polysaccharide biosynthesis protein IX92_15180 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IX92_15185 PF08241 Methyltransferase domain IX92_15195 PF00892 EamA-like transporter family IX92_15200 PF13193 AMP-binding enzyme C-terminal domain IX92_15200 PF00501 AMP-binding enzyme IX92_15205 PF02911 Formyl transferase, C-terminal domain IX92_15205 PF00551 Formyl transferase IX92_15230 PF00535 Glycosyl transferase family 2 IX92_15235 PF08889 WbqC-like protein family IX92_15240 PF02397 Bacterial sugar transferase IX92_15245 PF01370 NAD dependent epimerase/dehydratase family IX92_15255 PF00534 Glycosyl transferases group 1 IX92_15255 PF13477 Glycosyl transferase 4-like IX92_15260 PF00294 pfkB family carbohydrate kinase IX92_15260 PF01467 Cytidylyltransferase-like IX92_15265 PF13537 Glutamine amidotransferase domain IX92_15265 PF00733 Asparagine synthase IX92_15275 PF13439 Glycosyltransferase Family 4 IX92_15275 PF00534 Glycosyl transferases group 1 IX92_15295 PF01370 NAD dependent epimerase/dehydratase family IX92_15300 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IX92_15300 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IX92_15300 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IX92_15305 PF01370 NAD dependent epimerase/dehydratase family IX92_15310 PF00534 Glycosyl transferases group 1 IX92_15320 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IX92_15330 PF04488 Glycosyltransferase sugar-binding region containing DXD motif IX92_15335 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) IX92_15340 PF16363 GDP-mannose 4,6 dehydratase IX92_15345 PF00483 Nucleotidyl transferase IX92_15365 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IX92_15370 PF00535 Glycosyl transferase family 2 IX92_15375 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IX92_15380 PF01467 Cytidylyltransferase-like IX92_15385 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IX92_15385 PF06827 Zinc finger found in FPG and IleRS IX92_15385 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IX92_15395 PF00471 Ribosomal protein L33 IX92_15405 PF04002 RadC-like JAB domain IX92_15410 PF02441 Flavoprotein IX92_15410 PF04127 DNA / pantothenate metabolism flavoprotein IX92_15415 PF00440 Bacterial regulatory proteins, tetR family IX92_15420 PF03279 Bacterial lipid A biosynthesis acyltransferase IX92_15425 PF03279 Bacterial lipid A biosynthesis acyltransferase IX92_15430 PF00156 Phosphoribosyl transferase domain IX92_15435 PF01138 3' exoribonuclease family, domain 1 IX92_15435 PF03725 3' exoribonuclease family, domain 2 IX92_15440 PF03755 YicC-like family, N-terminal region IX92_15440 PF08340 Domain of unknown function (DUF1732) IX92_15445 PF00860 Permease family IX92_15455 PF02472 Biopolymer transport protein ExbD/TolR IX92_15460 PF01618 MotA/TolQ/ExbB proton channel family IX92_15475 PF07715 TonB-dependent Receptor Plug Domain IX92_15475 PF00593 TonB dependent receptor IX92_15485 PF08281 Sigma-70, region 4 IX92_15485 PF04542 Sigma-70 region 2 IX92_15490 PF00625 Guanylate kinase IX92_15495 PF01192 RNA polymerase Rpb6 IX92_15500 PF02824 TGS domain IX92_15500 PF04607 Region found in RelA / SpoT proteins IX92_15500 PF13291 ACT domain IX92_15505 PF00588 SpoU rRNA Methylase family IX92_15505 PF12105 SpoU, rRNA methylase, C-terminal IX92_15510 PF00270 DEAD/DEAH box helicase IX92_15510 PF00271 Helicase conserved C-terminal domain IX92_15510 PF17191 RecG wedge domain IX92_15515 PF00459 Inositol monophosphatase family IX92_15520 PF00293 NUDIX domain IX92_15525 PF01521 Iron-sulphur cluster biosynthesis IX92_15525 PF01106 NifU-like domain IX92_15530 PF00156 Phosphoribosyl transferase domain IX92_15535 PF00561 alpha/beta hydrolase fold IX92_15545 PF00575 S1 RNA binding domain IX92_15545 PF17674 HHH domain IX92_15545 PF09371 Tex-like protein N-terminal domain IX92_15545 PF16921 Tex protein YqgF-like domain IX92_15555 PF01272 Transcription elongation factor, GreA/GreB, C-term IX92_15555 PF03449 Transcription elongation factor, N-terminal IX92_15560 PF00486 Transcriptional regulatory protein, C terminal IX92_15560 PF00072 Response regulator receiver domain IX92_15565 PF00512 His Kinase A (phospho-acceptor) domain IX92_15565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_15565 PF00672 HAMP domain IX92_15575 PF04612 Type II secretion system (T2SS), protein M IX92_15580 PF05134 Type II secretion system (T2SS), protein L IX92_15580 PF12693 GspL periplasmic domain IX92_15585 PF03934 Type II secretion system (T2SS), protein K IX92_15590 PF11612 Type II secretion system (T2SS), protein J IX92_15590 PF07963 Prokaryotic N-terminal methylation motif IX92_15595 PF02501 Type II secretion system (T2SS), protein I IX92_15595 PF07963 Prokaryotic N-terminal methylation motif IX92_15600 PF12019 Type II transport protein GspH IX92_15605 PF07963 Prokaryotic N-terminal methylation motif IX92_15605 PF08334 Type II secretion system (T2SS), protein G IX92_15610 PF00482 Type II secretion system (T2SS), protein F IX92_15615 PF00437 Type II/IV secretion system protein IX92_15620 PF03958 Bacterial type II/III secretion system short domain IX92_15620 PF00263 Bacterial type II and III secretion system protein IX92_15625 PF11356 Type II secretion system protein C IX92_15630 PF01479 S4 domain IX92_15635 PF01430 Hsp33 protein IX92_15640 PF01293 Phosphoenolpyruvate carboxykinase IX92_15650 PF00583 Acetyltransferase (GNAT) family IX92_15650 PF09500 Putative thioesterase (yiiD_Cterm) IX92_15655 PF02580 D-Tyr-tRNA(Tyr) deacylase IX92_15675 PF00120 Glutamine synthetase, catalytic domain IX92_15675 PF03951 Glutamine synthetase, beta-Grasp domain IX92_15680 PF00989 PAS fold IX92_15680 PF00512 His Kinase A (phospho-acceptor) domain IX92_15680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_15685 PF00158 Sigma-54 interaction domain IX92_15685 PF02954 Bacterial regulatory protein, Fis family IX92_15685 PF00072 Response regulator receiver domain IX92_15690 PF03707 Bacterial signalling protein N terminal repeat IX92_15690 PF00563 EAL domain IX92_15690 PF00990 Diguanylate cyclase, GGDEF domain IX92_15695 PF00962 Adenosine/AMP deaminase IX92_15735 PF00132 Bacterial transferase hexapeptide (six repeats) IX92_15740 PF07369 Protein of unknown function (DUF1488) IX92_15745 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IX92_15745 PF08501 Shikimate dehydrogenase substrate binding domain IX92_15745 PF01488 Shikimate / quinate 5-dehydrogenase IX92_15750 PF01218 Coproporphyrinogen III oxidase IX92_15755 PF01300 Telomere recombination IX92_15760 PF00731 AIR carboxylase IX92_15765 PF02222 ATP-grasp domain IX92_15765 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IX92_15770 PF01396 Topoisomerase DNA binding C4 zinc finger IX92_15775 PF04361 Protein of unknown function (DUF494) IX92_15780 PF02481 DNA recombination-mediator protein A IX92_15780 PF17782 DprA winged helix domain IX92_15785 PF01327 Polypeptide deformylase IX92_15790 PF00551 Formyl transferase IX92_15790 PF02911 Formyl transferase, C-terminal domain IX92_15795 PF01189 16S rRNA methyltransferase RsmB/F IX92_15795 PF01029 NusB family IX92_15800 PF02254 TrkA-N domain IX92_15800 PF02080 TrkA-C domain IX92_15805 PF02386 Cation transport protein IX92_15815 PF03006 Haemolysin-III related IX92_15820 PF07070 SpoOM protein IX92_15830 PF06288 Protein of unknown function (DUF1040) IX92_15835 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase IX92_15835 PF13746 4Fe-4S dicluster domain IX92_15835 PF12801 4Fe-4S binding domain IX92_15840 PF01636 Phosphotransferase enzyme family IX92_15845 PF01323 DSBA-like thioredoxin domain IX92_15850 PF01553 Acyltransferase IX92_15860 PF01078 Magnesium chelatase, subunit ChlI IX92_15860 PF13335 Magnesium chelatase, subunit ChlI C-terminal IX92_15865 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IX92_15865 PF00205 Thiamine pyrophosphate enzyme, central domain IX92_15865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IX92_15875 PF01063 Amino-transferase class IV IX92_15880 PF00920 Dehydratase family IX92_15885 PF00585 C-terminal regulatory domain of Threonine dehydratase IX92_15885 PF00291 Pyridoxal-phosphate dependent enzyme IX92_15890 PF00107 Zinc-binding dehydrogenase IX92_15890 PF08240 Alcohol dehydrogenase GroES-like domain IX92_15895 PF03466 LysR substrate binding domain IX92_15895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_15905 PF01206 Sulfurtransferase TusA IX92_15915 PF01169 Uncharacterized protein family UPF0016 IX92_15925 PF05746 DALR anticodon binding domain IX92_15925 PF02092 Glycyl-tRNA synthetase beta subunit IX92_15930 PF00155 Aminotransferase class I and II IX92_15935 PF00011 Hsp20/alpha crystallin family IX92_15940 PF00986 DNA gyrase B subunit, carboxyl terminus IX92_15940 PF18053 DNA gyrase B subunit insert domain IX92_15940 PF00204 DNA gyrase B IX92_15940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_15940 PF01751 Toprim domain IX92_15945 PF02463 RecF/RecN/SMC N terminal domain IX92_15950 PF00712 DNA polymerase III beta subunit, N-terminal domain IX92_15950 PF02767 DNA polymerase III beta subunit, central domain IX92_15950 PF02768 DNA polymerase III beta subunit, C-terminal domain IX92_15955 PF00308 Bacterial dnaA protein IX92_15955 PF08299 Bacterial dnaA protein helix-turn-helix IX92_15955 PF11638 DnaA N-terminal domain IX92_15960 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX92_15965 PF00528 Binding-protein-dependent transport system inner membrane component IX92_15970 PF00005 ABC transporter IX92_15980 PF00825 Ribonuclease P IX92_15985 PF02096 60Kd inner membrane protein IX92_15985 PF14849 YidC periplasmic domain IX92_15990 PF10396 GTP-binding protein TrmE N-terminus IX92_15990 PF12631 MnmE helical domain IX92_15990 PF01926 50S ribosome-binding GTPase IX92_15995 PF00258 Flavodoxin IX92_16020 PF00005 ABC transporter IX92_16020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX92_16025 PF00005 ABC transporter IX92_16025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX92_16040 PF01709 Transcriptional regulator IX92_16075 PF01638 HxlR-like helix-turn-helix IX92_16090 PF08803 Putative mono-oxygenase ydhR IX92_16095 PF03466 LysR substrate binding domain IX92_16095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_16100 PF00293 NUDIX domain IX92_16105 PF13407 Periplasmic binding protein domain IX92_16115 PF03707 Bacterial signalling protein N terminal repeat IX92_16115 PF00563 EAL domain IX92_16115 PF00990 Diguanylate cyclase, GGDEF domain IX92_16120 PF00892 EamA-like transporter family IX92_16125 PF01047 MarR family IX92_16130 PF00034 Cytochrome c IX92_16150 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain IX92_16150 PF02129 X-Pro dipeptidyl-peptidase (S15 family) IX92_16155 PF03606 C4-dicarboxylate anaerobic carrier IX92_16160 PF03466 LysR substrate binding domain IX92_16160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_16170 PF01274 Malate synthase IX92_16175 PF00205 Thiamine pyrophosphate enzyme, central domain IX92_16175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IX92_16175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IX92_16180 PF01261 Xylose isomerase-like TIM barrel IX92_16185 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IX92_16185 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IX92_16205 PF00753 Metallo-beta-lactamase superfamily IX92_16205 PF14864 Alkyl sulfatase C-terminal IX92_16205 PF14863 Alkyl sulfatase dimerisation IX92_16220 PF02653 Branched-chain amino acid transport system / permease component IX92_16230 PF00005 ABC transporter IX92_16230 PF12399 Branched-chain amino acid ATP-binding cassette transporter IX92_16235 PF00005 ABC transporter IX92_16240 PF01774 UreD urease accessory protein IX92_16245 PF00547 Urease, gamma subunit IX92_16250 PF00699 Urease beta subunit IX92_16255 PF00449 Urease alpha-subunit, N-terminal domain IX92_16255 PF01979 Amidohydrolase family IX92_16260 PF02814 UreE urease accessory protein, N-terminal domain IX92_16260 PF05194 UreE urease accessory protein, C-terminal domain IX92_16270 PF01730 UreF IX92_16275 PF02492 CobW/HypB/UreG, nucleotide-binding domain IX92_16305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IX92_16310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_16310 PF02743 Cache domain IX92_16310 PF00672 HAMP domain IX92_16315 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX92_16320 PF02685 Glucokinase IX92_16320 PF01380 SIS domain IX92_16320 PF01418 Helix-turn-helix domain, rpiR family IX92_16330 PF07969 Amidohydrolase family IX92_16340 PF00474 Sodium:solute symporter family IX92_16345 PF00294 pfkB family carbohydrate kinase IX92_16350 PF01081 KDPG and KHG aldolase IX92_16355 PF02838 Glycosyl hydrolase family 20, domain 2 IX92_16355 PF00728 Glycosyl hydrolase family 20, catalytic domain IX92_16360 PF10282 Lactonase, 7-bladed beta-propeller IX92_16370 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IX92_16370 PF06481 COX Aromatic Rich Motif IX92_16375 PF00115 Cytochrome C and Quinol oxidase polypeptide I IX92_16380 PF00510 Cytochrome c oxidase subunit III IX92_16390 PF01040 UbiA prenyltransferase family IX92_16415 PF00753 Metallo-beta-lactamase superfamily IX92_16425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_16425 PF03466 LysR substrate binding domain IX92_16430 PF00171 Aldehyde dehydrogenase family IX92_16440 PF00486 Transcriptional regulatory protein, C terminal IX92_16440 PF00072 Response regulator receiver domain IX92_16445 PF03928 Haem-degrading IX92_16450 PF06224 Winged helix DNA-binding domain IX92_16455 PF00561 alpha/beta hydrolase fold IX92_16460 PF01979 Amidohydrolase family IX92_16465 PF00860 Permease family IX92_16470 PF00860 Permease family IX92_16475 PF00576 HIUase/Transthyretin family IX92_16485 PF09349 OHCU decarboxylase IX92_16485 PF01014 Uricase IX92_16490 PF03561 Allantoicase repeat IX92_16495 PF04115 Ureidoglycolate lyase IX92_16505 PF00672 HAMP domain IX92_16505 PF02743 Cache domain IX92_16505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_16515 PF01037 Lrp/AsnC ligand binding domain IX92_16525 PF00672 HAMP domain IX92_16525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_16525 PF00512 His Kinase A (phospho-acceptor) domain IX92_16525 PF01627 Hpt domain IX92_16525 PF00072 Response regulator receiver domain IX92_16525 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IX92_16530 PF01209 ubiE/COQ5 methyltransferase family IX92_16535 PF01979 Amidohydrolase family IX92_16545 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IX92_16545 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IX92_16550 PF03450 CO dehydrogenase flavoprotein C-terminal domain IX92_16550 PF00941 FAD binding domain in molybdopterin dehydrogenase IX92_16555 PF00392 Bacterial regulatory proteins, gntR family IX92_16555 PF07729 FCD domain IX92_16560 PF00462 Glutaredoxin IX92_16560 PF08534 Redoxin IX92_16580 PF03795 YCII-related domain IX92_16600 PF00561 alpha/beta hydrolase fold IX92_16605 PF12852 Cupin IX92_16605 PF12833 Helix-turn-helix domain IX92_16610 PF01979 Amidohydrolase family IX92_16615 PF00082 Subtilase family IX92_16615 PF05922 Peptidase inhibitor I9 IX92_16615 PF04151 Bacterial pre-peptidase C-terminal domain IX92_16620 PF00857 Isochorismatase family IX92_16625 PF14525 AraC-binding-like domain IX92_16625 PF12833 Helix-turn-helix domain IX92_16630 PF00672 HAMP domain IX92_16630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_16630 PF17200 Single Cache domain 2 IX92_16645 PF00132 Bacterial transferase hexapeptide (six repeats) IX92_16650 PF10928 Protein of unknown function (DUF2810) IX92_16665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_16665 PF03466 LysR substrate binding domain IX92_16670 PF17874 MalT-like TPR region IX92_16670 PF00196 Bacterial regulatory proteins, luxR family IX92_16675 PF00343 Carbohydrate phosphorylase IX92_16680 PF02446 4-alpha-glucanotransferase IX92_16685 PF02806 Alpha amylase, C-terminal all-beta domain IX92_16685 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IX92_16685 PF00128 Alpha amylase, catalytic domain IX92_16695 PF01411 tRNA synthetases class II (A) IX92_16695 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IX92_16700 PF17676 LD-carboxypeptidase C-terminal domain IX92_16700 PF02016 LD-carboxypeptidase N-terminal domain IX92_16735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_16735 PF03466 LysR substrate binding domain IX92_16740 PF13302 Acetyltransferase (GNAT) domain IX92_16750 PF00561 alpha/beta hydrolase fold IX92_16755 PF02525 Flavodoxin-like fold IX92_16765 PF03466 LysR substrate binding domain IX92_16765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_16775 PF00106 short chain dehydrogenase IX92_16815 PF00892 EamA-like transporter family IX92_16840 PF00557 Metallopeptidase family M24 IX92_16860 PF02743 Cache domain IX92_16860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_16860 PF00672 HAMP domain IX92_16870 PF01638 HxlR-like helix-turn-helix IX92_16880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_16880 PF03466 LysR substrate binding domain IX92_16885 PF02311 AraC-like ligand binding domain IX92_16885 PF12833 Helix-turn-helix domain IX92_16930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_16930 PF03466 LysR substrate binding domain IX92_16965 PF12833 Helix-turn-helix domain IX92_16965 PF02311 AraC-like ligand binding domain IX92_16970 PF01810 LysE type translocator IX92_16980 PF00881 Nitroreductase family IX92_16990 PF01380 SIS domain IX92_16990 PF01418 Helix-turn-helix domain, rpiR family IX92_16995 PF02378 Phosphotransferase system, EIIC IX92_17000 PF07748 Glycosyl hydrolases family 38 C-terminal domain IX92_17000 PF09261 Alpha mannosidase middle domain IX92_17000 PF01074 Glycosyl hydrolases family 38 N-terminal domain IX92_17005 PF00128 Alpha amylase, catalytic domain IX92_17010 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IX92_17010 PF02378 Phosphotransferase system, EIIC IX92_17010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IX92_17015 PF14245 Type IV pilin PilA IX92_17015 PF07963 Prokaryotic N-terminal methylation motif IX92_17025 PF07690 Major Facilitator Superfamily IX92_17030 PF00005 ABC transporter IX92_17035 PF01497 Periplasmic binding protein IX92_17040 PF01032 FecCD transport family IX92_17045 PF06276 Ferric iron reductase FhuF-like transporter IX92_17045 PF04183 IucA / IucC family IX92_17055 PF04183 IucA / IucC family IX92_17055 PF06276 Ferric iron reductase FhuF-like transporter IX92_17060 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) IX92_17065 PF00593 TonB dependent receptor IX92_17065 PF07715 TonB-dependent Receptor Plug Domain IX92_17070 PF02028 BCCT, betaine/carnitine/choline family transporter IX92_17080 PF00501 AMP-binding enzyme IX92_17080 PF00550 Phosphopantetheine attachment site IX92_17080 PF00668 Condensation domain IX92_17080 PF13193 AMP-binding enzyme C-terminal domain IX92_17080 PF00975 Thioesterase domain IX92_17090 PF06339 Ectoine synthase IX92_17095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX92_17095 PF02770 Acyl-CoA dehydrogenase, middle domain IX92_17095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX92_17100 PF01323 DSBA-like thioredoxin domain IX92_17105 PF00893 Small Multidrug Resistance protein IX92_17110 PF00893 Small Multidrug Resistance protein IX92_17115 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IX92_17130 PF00795 Carbon-nitrogen hydrolase IX92_17135 PF08241 Methyltransferase domain IX92_17160 PF07859 alpha/beta hydrolase fold IX92_17170 PF00005 ABC transporter IX92_17170 PF00571 CBS domain IX92_17175 PF00528 Binding-protein-dependent transport system inner membrane component IX92_17185 PF12793 Sugar transport-related sRNA regulator N-term IX92_17185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX92_17190 PF00881 Nitroreductase family IX92_17195 PF01914 MarC family integral membrane protein IX92_17205 PF01554 MatE IX92_17215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_17215 PF03466 LysR substrate binding domain IX92_17240 PF00263 Bacterial type II and III secretion system protein IX92_17240 PF04972 BON domain IX92_17240 PF13629 Pilus formation protein N terminal region IX92_17250 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IX92_17255 PF00437 Type II/IV secretion system protein IX92_17305 PF02424 ApbE family IX92_17310 PF11412 Disulphide bond corrector protein DsbC IX92_17310 PF02683 Cytochrome C biogenesis protein transmembrane region IX92_17315 PF00171 Aldehyde dehydrogenase family IX92_17320 PF03466 LysR substrate binding domain IX92_17320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_17325 PF00106 short chain dehydrogenase IX92_17330 PF17200 Single Cache domain 2 IX92_17330 PF00672 HAMP domain IX92_17330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_17335 PF12849 PBP superfamily domain IX92_17340 PF00528 Binding-protein-dependent transport system inner membrane component IX92_17345 PF00528 Binding-protein-dependent transport system inner membrane component IX92_17350 PF00005 ABC transporter IX92_17355 PF03707 Bacterial signalling protein N terminal repeat IX92_17355 PF00563 EAL domain IX92_17355 PF00990 Diguanylate cyclase, GGDEF domain IX92_17365 PF00375 Sodium:dicarboxylate symporter family IX92_17370 PF03193 RsgA GTPase IX92_17390 PF12558 ATP-binding cassette cobalt transporter IX92_17390 PF00005 ABC transporter IX92_17395 PF07155 ECF-type riboflavin transporter, S component IX92_17400 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IX92_17415 PF00583 Acetyltransferase (GNAT) family IX92_17420 PF00672 HAMP domain IX92_17420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_17420 PF12729 Four helix bundle sensory module for signal transduction IX92_17425 PF07238 PilZ domain IX92_17425 PF12945 Flagellar protein YcgR IX92_17450 PF00588 SpoU rRNA Methylase family IX92_17450 PF08032 RNA 2'-O ribose methyltransferase substrate binding IX92_17455 PF11953 Domain of unknown function (DUF3470) IX92_17455 PF00037 4Fe-4S binding domain IX92_17465 PF03466 LysR substrate binding domain IX92_17465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_17470 PF01037 Lrp/AsnC ligand binding domain IX92_17495 PF01047 MarR family IX92_17500 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IX92_17505 PF03606 C4-dicarboxylate anaerobic carrier IX92_17520 PF00486 Transcriptional regulatory protein, C terminal IX92_17520 PF00072 Response regulator receiver domain IX92_17525 PF04116 Fatty acid hydroxylase superfamily IX92_17545 PF00873 AcrB/AcrD/AcrF family IX92_17565 PF03466 LysR substrate binding domain IX92_17565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_17570 PF00175 Oxidoreductase NAD-binding domain IX92_17570 PF00111 2Fe-2S iron-sulfur cluster binding domain IX92_17570 PF00970 Oxidoreductase FAD-binding domain IX92_17575 PF03063 Prismane/CO dehydrogenase family IX92_17585 PF00990 Diguanylate cyclase, GGDEF domain IX92_17585 PF07694 5TMR of 5TMR-LYT IX92_17590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_17590 PF03466 LysR substrate binding domain IX92_17610 PF01590 GAF domain IX92_17610 PF00158 Sigma-54 interaction domain IX92_17615 PF02311 AraC-like ligand binding domain IX92_17615 PF12833 Helix-turn-helix domain IX92_17635 PF03441 FAD binding domain of DNA photolyase IX92_17635 PF00875 DNA photolyase IX92_17640 PF04244 Deoxyribodipyrimidine photo-lyase-related protein IX92_17650 PF03992 Antibiotic biosynthesis monooxygenase IX92_17655 PF03733 Inner membrane component domain IX92_17665 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX92_17670 PF00155 Aminotransferase class I and II IX92_17675 PF03466 LysR substrate binding domain IX92_17675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_17680 PF00753 Metallo-beta-lactamase superfamily IX92_17685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX92_17695 PF07504 Fungalysin/Thermolysin Propeptide Motif IX92_17695 PF03413 Peptidase propeptide and YPEB domain IX92_17695 PF02868 Thermolysin metallopeptidase, alpha-helical domain IX92_17695 PF04151 Bacterial pre-peptidase C-terminal domain IX92_17695 PF01447 Thermolysin metallopeptidase, catalytic domain IX92_17700 PF04151 Bacterial pre-peptidase C-terminal domain IX92_17700 PF04389 Peptidase family M28 IX92_17710 PF00909 Ammonium Transporter Family IX92_17715 PF00072 Response regulator receiver domain IX92_17725 PF04324 BFD-like [2Fe-2S] binding domain IX92_17725 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX92_17730 PF01266 FAD dependent oxidoreductase IX92_17735 PF00795 Carbon-nitrogen hydrolase IX92_17760 PF08525 Opacity-associated protein A N-terminal motif IX92_17760 PF01551 Peptidase family M23 IX92_17760 PF01476 LysM domain IX92_17765 PF03922 OmpW family IX92_17785 PF00082 Subtilase family IX92_17790 PF00106 short chain dehydrogenase IX92_17795 PF05995 Cysteine dioxygenase type I IX92_17805 PF01810 LysE type translocator IX92_17810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IX92_17810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IX92_17815 PF12848 ABC transporter IX92_17815 PF16326 ABC transporter C-terminal domain IX92_17815 PF00005 ABC transporter IX92_17845 PF00512 His Kinase A (phospho-acceptor) domain IX92_17845 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX92_17845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_17850 PF03334 Na+/H+ antiporter subunit IX92_17855 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) IX92_17870 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IX92_17875 PF13244 Domain of unknown function (DUF4040) IX92_17875 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter IX92_17875 PF00361 Proton-conducting membrane transporter IX92_17875 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IX92_17885 PF00582 Universal stress protein family IX92_17890 PF00664 ABC transporter transmembrane region IX92_17890 PF00005 ABC transporter IX92_17900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_17900 PF03466 LysR substrate binding domain IX92_17905 PF08240 Alcohol dehydrogenase GroES-like domain IX92_17905 PF00107 Zinc-binding dehydrogenase IX92_17920 PF00472 RF-1 domain IX92_17940 PF10127 RNA repair pathway DNA polymerase beta family IX92_17945 PF01139 tRNA-splicing ligase RtcB IX92_17965 PF06956 Regulator of RNA terminal phosphate cyclase IX92_17965 PF00158 Sigma-54 interaction domain IX92_17970 PF02347 Glycine cleavage system P-protein IX92_17980 PF00464 Serine hydroxymethyltransferase IX92_17990 PF08669 Glycine cleavage T-protein C-terminal barrel domain IX92_17990 PF01571 Aminomethyltransferase folate-binding domain IX92_18000 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IX92_18000 PF00128 Alpha amylase, catalytic domain IX92_18005 PF02264 LamB porin IX92_18015 PF00672 HAMP domain IX92_18015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_18015 PF17200 Single Cache domain 2 IX92_18025 PF02743 Cache domain IX92_18025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_18025 PF00672 HAMP domain IX92_18040 PF13411 MerR HTH family regulatory protein IX92_18050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_18050 PF00672 HAMP domain IX92_18050 PF12729 Four helix bundle sensory module for signal transduction IX92_18060 PF09278 MerR, DNA binding IX92_18060 PF00376 MerR family regulatory protein IX92_18080 PF00474 Sodium:solute symporter family IX92_18090 PF03441 FAD binding domain of DNA photolyase IX92_18090 PF00875 DNA photolyase IX92_18110 PF00892 EamA-like transporter family IX92_18120 PF17967 Pullulanase N2 domain IX92_18120 PF18494 Pullulanase Ins domain IX92_18120 PF03714 Bacterial pullanase-associated domain IX92_18120 PF11852 Domain of unknown function (DUF3372) IX92_18120 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IX92_18135 PF14489 QueF-like protein IX92_18135 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term IX92_18140 PF00797 N-acetyltransferase IX92_18145 PF01497 Periplasmic binding protein IX92_18145 PF12833 Helix-turn-helix domain IX92_18150 PF00155 Aminotransferase class I and II IX92_18160 PF01810 LysE type translocator IX92_18170 PF00155 Aminotransferase class I and II IX92_18170 PF00392 Bacterial regulatory proteins, gntR family IX92_18180 PF01037 Lrp/AsnC ligand binding domain IX92_18195 PF00672 HAMP domain IX92_18195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_18200 PF01641 SelR domain IX92_18200 PF01625 Peptide methionine sulfoxide reductase IX92_18205 PF13599 Pentapeptide repeats (9 copies) IX92_18210 PF02322 Cytochrome bd terminal oxidase subunit II IX92_18215 PF01654 Cytochrome bd terminal oxidase subunit I IX92_18220 PF03116 NQR2, RnfD, RnfE family IX92_18235 PF00563 EAL domain IX92_18235 PF00990 Diguanylate cyclase, GGDEF domain IX92_18235 PF03707 Bacterial signalling protein N terminal repeat IX92_18240 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 IX92_18255 PF00873 AcrB/AcrD/AcrF family IX92_18265 PF00873 AcrB/AcrD/AcrF family IX92_18275 PF13977 BetI-type transcriptional repressor, C-terminal IX92_18275 PF00440 Bacterial regulatory proteins, tetR family IX92_18295 PF00486 Transcriptional regulatory protein, C terminal IX92_18295 PF00072 Response regulator receiver domain IX92_18300 PF14827 Double sensory domain of two-component sensor kinase IX92_18300 PF00672 HAMP domain IX92_18300 PF13426 PAS domain IX92_18300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_18300 PF00512 His Kinase A (phospho-acceptor) domain IX92_18305 PF13673 Acetyltransferase (GNAT) domain IX92_18320 PF01627 Hpt domain IX92_18320 PF00072 Response regulator receiver domain IX92_18320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_18320 PF00672 HAMP domain IX92_18320 PF17149 Periplasmic sensor domain found in signal transduction proteins IX92_18320 PF00512 His Kinase A (phospho-acceptor) domain IX92_18340 PF00005 ABC transporter IX92_18360 PF00206 Lyase IX92_18360 PF10415 Fumarase C C-terminus IX92_18380 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IX92_18385 PF02798 Glutathione S-transferase, N-terminal domain IX92_18390 PF13419 Haloacid dehalogenase-like hydrolase IX92_18400 PF00128 Alpha amylase, catalytic domain IX92_18420 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IX92_18420 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IX92_18425 PF00141 Peroxidase IX92_18430 PF00043 Glutathione S-transferase, C-terminal domain IX92_18430 PF02798 Glutathione S-transferase, N-terminal domain IX92_18435 PF00107 Zinc-binding dehydrogenase IX92_18435 PF16884 N-terminal domain of oxidoreductase IX92_18440 PF00440 Bacterial regulatory proteins, tetR family IX92_18440 PF16925 Tetracyclin repressor-like, C-terminal domain IX92_18445 PF07694 5TMR of 5TMR-LYT IX92_18445 PF00990 Diguanylate cyclase, GGDEF domain IX92_18465 PF00270 DEAD/DEAH box helicase IX92_18465 PF00271 Helicase conserved C-terminal domain IX92_18475 PF07969 Amidohydrolase family IX92_18485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_18485 PF03466 LysR substrate binding domain IX92_18500 PF00072 Response regulator receiver domain IX92_18500 PF00486 Transcriptional regulatory protein, C terminal IX92_18505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_18505 PF00512 His Kinase A (phospho-acceptor) domain IX92_18510 PF12849 PBP superfamily domain IX92_18515 PF00528 Binding-protein-dependent transport system inner membrane component IX92_18520 PF00528 Binding-protein-dependent transport system inner membrane component IX92_18525 PF00005 ABC transporter IX92_18530 PF00356 Bacterial regulatory proteins, lacI family IX92_18545 PF00528 Binding-protein-dependent transport system inner membrane component IX92_18550 PF03633 Glycosyl hydrolase family 65, C-terminal domain IX92_18550 PF03632 Glycosyl hydrolase family 65 central catalytic domain IX92_18550 PF03636 Glycosyl hydrolase family 65, N-terminal domain IX92_18555 PF13419 Haloacid dehalogenase-like hydrolase IX92_18560 PF00005 ABC transporter IX92_18560 PF08402 TOBE domain IX92_18570 PF08244 Glycosyl hydrolases family 32 C terminal IX92_18570 PF00251 Glycosyl hydrolases family 32 N-terminal domain IX92_18575 PF00128 Alpha amylase, catalytic domain IX92_18580 PF12464 Maltose acetyltransferase IX92_18580 PF14602 Hexapeptide repeat of succinyl-transferase IX92_18595 PF03060 Nitronate monooxygenase IX92_18605 PF01042 Endoribonuclease L-PSP IX92_18620 PF04231 Endonuclease I IX92_18645 PF00849 RNA pseudouridylate synthase IX92_18660 PF00756 Putative esterase IX92_18665 PF00107 Zinc-binding dehydrogenase IX92_18665 PF08240 Alcohol dehydrogenase GroES-like domain IX92_18670 PF03466 LysR substrate binding domain IX92_18670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_18675 PF07690 Major Facilitator Superfamily IX92_18690 PF01810 LysE type translocator IX92_18695 PF01037 Lrp/AsnC ligand binding domain IX92_18700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_18700 PF00672 HAMP domain IX92_18700 PF17200 Single Cache domain 2 IX92_18705 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IX92_18705 PF02824 TGS domain IX92_18705 PF03129 Anticodon binding domain IX92_18705 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IX92_18710 PF00707 Translation initiation factor IF-3, C-terminal domain IX92_18710 PF05198 Translation initiation factor IF-3, N-terminal domain IX92_18715 PF01632 Ribosomal protein L35 IX92_18725 PF01266 FAD dependent oxidoreductase IX92_18745 PF00072 Response regulator receiver domain IX92_18755 PF00171 Aldehyde dehydrogenase family IX92_18760 PF02954 Bacterial regulatory protein, Fis family IX92_18760 PF00158 Sigma-54 interaction domain IX92_18760 PF01590 GAF domain IX92_18780 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain IX92_18780 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IX92_18785 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IX92_18790 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain IX92_18790 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain IX92_18795 PF01966 HD domain IX92_18815 PF07690 Major Facilitator Superfamily IX92_18820 PF07730 Histidine kinase IX92_18820 PF05231 MASE1 IX92_18820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_18825 PF00196 Bacterial regulatory proteins, luxR family IX92_18825 PF00072 Response regulator receiver domain IX92_18830 PF07690 Major Facilitator Superfamily IX92_18850 PF03473 MOSC domain IX92_18850 PF03473 MOSC domain IX92_18850 PF03476 MOSC N-terminal beta barrel domain IX92_18850 PF00111 2Fe-2S iron-sulfur cluster binding domain IX92_18850 PF00111 2Fe-2S iron-sulfur cluster binding domain IX92_18850 PF03476 MOSC N-terminal beta barrel domain IX92_18855 PF03472 Autoinducer binding domain IX92_18855 PF00196 Bacterial regulatory proteins, luxR family IX92_18860 PF00455 DeoR C terminal sensor domain IX92_18860 PF08220 DeoR-like helix-turn-helix domain IX92_18865 PF00990 Diguanylate cyclase, GGDEF domain IX92_18865 PF17151 Periplasmic sensor domain IX92_18885 PF05661 Protein of unknown function (DUF808) IX92_18895 PF00128 Alpha amylase, catalytic domain IX92_18900 PF02743 Cache domain IX92_18900 PF00672 HAMP domain IX92_18900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_18930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_18930 PF08447 PAS fold IX92_18935 PF08678 Rsbr N terminal IX92_18935 PF01740 STAS domain IX92_18945 PF13581 Histidine kinase-like ATPase domain IX92_18955 PF00512 His Kinase A (phospho-acceptor) domain IX92_18955 PF01627 Hpt domain IX92_18955 PF00072 Response regulator receiver domain IX92_18955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_18955 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IX92_18955 PF00672 HAMP domain IX92_18960 PF00072 Response regulator receiver domain IX92_18975 PF03853 YjeF-related protein N-terminus IX92_18975 PF01256 Carbohydrate kinase IX92_18985 PF00478 IMP dehydrogenase / GMP reductase domain IX92_18990 PF00589 Phage integrase family IX92_19030 PF06892 Phage regulatory protein CII (CP76) IX92_19055 PF05840 Bacteriophage replication gene A protein (GPA) IX92_19180 PF17482 Phage tail sheath C-terminal domain IX92_19180 PF04984 Phage tail sheath protein subtilisin-like domain IX92_19210 PF10549 ORF11CD3 domain IX92_19210 PF09669 Phage regulatory protein Rha (Phage_pRha) IX92_19235 PF00478 IMP dehydrogenase / GMP reductase domain IX92_19260 PF00440 Bacterial regulatory proteins, tetR family IX92_19260 PF13977 BetI-type transcriptional repressor, C-terminal IX92_19270 PF05199 GMC oxidoreductase IX92_19270 PF00732 GMC oxidoreductase IX92_19275 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IX92_19280 PF00528 Binding-protein-dependent transport system inner membrane component IX92_19285 PF00571 CBS domain IX92_19285 PF00005 ABC transporter IX92_19300 PF02567 Phenazine biosynthesis-like protein IX92_19305 PF01070 FMN-dependent dehydrogenase IX92_19310 PF02652 L-lactate permease IX92_19315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_19315 PF03466 LysR substrate binding domain IX92_19335 PF00005 ABC transporter IX92_19335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX92_19345 PF13654 AAA domain IX92_19345 PF05362 Lon protease (S16) C-terminal proteolytic domain IX92_19350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IX92_19350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IX92_19355 PF00672 HAMP domain IX92_19355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_19355 PF17200 Single Cache domain 2 IX92_19370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX92_19375 PF00528 Binding-protein-dependent transport system inner membrane component IX92_19380 PF00528 Binding-protein-dependent transport system inner membrane component IX92_19380 PF12911 N-terminal TM domain of oligopeptide transport permease C IX92_19385 PF00005 ABC transporter IX92_19385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX92_19395 PF00990 Diguanylate cyclase, GGDEF domain IX92_19395 PF00072 Response regulator receiver domain IX92_19400 PF03707 Bacterial signalling protein N terminal repeat IX92_19400 PF00990 Diguanylate cyclase, GGDEF domain IX92_19400 PF00563 EAL domain IX92_19415 PF00196 Bacterial regulatory proteins, luxR family IX92_19415 PF00072 Response regulator receiver domain IX92_19435 PF01032 FecCD transport family IX92_19440 PF01032 FecCD transport family IX92_19445 PF00005 ABC transporter IX92_19450 PF01268 Formate--tetrahydrofolate ligase IX92_19465 PF00909 Ammonium Transporter Family IX92_19465 PF00672 HAMP domain IX92_19470 PF01497 Periplasmic binding protein IX92_19475 PF07715 TonB-dependent Receptor Plug Domain IX92_19475 PF00593 TonB dependent receptor IX92_19480 PF16750 Sensor domain of 2-component histidine kinase IX92_19480 PF00672 HAMP domain IX92_19480 PF00512 His Kinase A (phospho-acceptor) domain IX92_19480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_19485 PF00486 Transcriptional regulatory protein, C terminal IX92_19485 PF00072 Response regulator receiver domain IX92_19490 PF08774 VRR-NUC domain IX92_19490 PF18081 Fanconi anemia-associated nuclease SAP domain IX92_19495 PF07690 Major Facilitator Superfamily IX92_19505 PF00672 HAMP domain IX92_19505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_19505 PF17200 Single Cache domain 2 IX92_19510 PF00990 Diguanylate cyclase, GGDEF domain IX92_19520 PF08525 Opacity-associated protein A N-terminal motif IX92_19520 PF01476 LysM domain IX92_19520 PF01551 Peptidase family M23 IX92_19540 PF00158 Sigma-54 interaction domain IX92_19540 PF02954 Bacterial regulatory protein, Fis family IX92_19540 PF01590 GAF domain IX92_19545 PF17871 AAA lid domain IX92_19545 PF07724 AAA domain (Cdc48 subfamily) IX92_19545 PF00004 ATPase family associated with various cellular activities (AAA) IX92_19545 PF10431 C-terminal, D2-small domain, of ClpB protein IX92_19550 PF05638 Type VI secretion system effector, Hcp IX92_19555 PF04717 Type VI secretion system, phage-baseplate injector IX92_19580 PF00069 Protein kinase domain IX92_19580 PF03793 PASTA domain IX92_19615 PF01037 Lrp/AsnC ligand binding domain IX92_19655 PF00703 Glycosyl hydrolases family 2 IX92_19655 PF02836 Glycosyl hydrolases family 2, TIM barrel domain IX92_19655 PF02837 Glycosyl hydrolases family 2, sugar binding domain IX92_19655 PF02929 Beta galactosidase small chain IX92_19655 PF16353 Domain of unknown function(DUF4981) IX92_19670 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain IX92_19670 PF17189 Glycosyl hydrolase family 30 beta sandwich domain IX92_19675 PF00356 Bacterial regulatory proteins, lacI family IX92_19680 PF00440 Bacterial regulatory proteins, tetR family IX92_19680 PF08361 MAATS-type transcriptional repressor, C-terminal region IX92_19685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IX92_19690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IX92_19695 PF00873 AcrB/AcrD/AcrF family IX92_19700 PF00106 short chain dehydrogenase IX92_19705 PF00108 Thiolase, N-terminal domain IX92_19705 PF02803 Thiolase, C-terminal domain IX92_19715 PF00561 alpha/beta hydrolase fold IX92_19715 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus IX92_19720 PF01177 Asp/Glu/Hydantoin racemase IX92_19725 PF07690 Major Facilitator Superfamily IX92_19730 PF00657 GDSL-like Lipase/Acylhydrolase IX92_19735 PF00801 PKD domain IX92_19735 PF05547 Immune inhibitor A peptidase M6 IX92_19755 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IX92_19755 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX92_19765 PF04143 Sulphur transport IX92_19780 PF13597 Anaerobic ribonucleoside-triphosphate reductase IX92_19780 PF03477 ATP cone domain IX92_19790 PF00155 Aminotransferase class I and II IX92_19795 PF08443 RimK-like ATP-grasp domain IX92_19795 PF18030 RimK PreATP-grasp domain IX92_19805 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IX92_19805 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IX92_19825 PF13183 4Fe-4S dicluster domain IX92_19825 PF02754 Cysteine-rich domain IX92_19830 PF00890 FAD binding domain IX92_19835 PF04324 BFD-like [2Fe-2S] binding domain IX92_19835 PF01266 FAD dependent oxidoreductase IX92_19840 PF00230 Major intrinsic protein IX92_19845 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IX92_19845 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IX92_19870 PF01541 GIY-YIG catalytic domain IX92_19880 PF13407 Periplasmic binding protein domain IX92_19885 PF00072 Response regulator receiver domain IX92_19885 PF09308 LuxQ, periplasmic IX92_19885 PF00512 His Kinase A (phospho-acceptor) domain IX92_19885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_19895 PF01266 FAD dependent oxidoreductase IX92_19895 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IX92_19910 PF12805 FUSC-like inner membrane protein yccS IX92_19915 PF13361 UvrD-like helicase C-terminal domain IX92_19915 PF00580 UvrD/REP helicase N-terminal domain IX92_19915 PF12462 DNA helicase IV / RNA helicase N terminal IX92_19935 PF00684 DnaJ central domain IX92_19935 PF01556 DnaJ C terminal domain IX92_19935 PF00226 DnaJ domain IX92_19945 PF00990 Diguanylate cyclase, GGDEF domain IX92_19945 PF00563 EAL domain IX92_19945 PF13188 PAS domain IX92_19945 PF03707 Bacterial signalling protein N terminal repeat IX92_19950 PF12241 Trans-2-enoyl-CoA reductase catalytic region IX92_19950 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase IX92_19950 PF07055 Enoyl reductase FAD binding domain IX92_19955 PF13472 GDSL-like Lipase/Acylhydrolase family IX92_19960 PF00005 ABC transporter IX92_19970 PF01134 Glucose inhibited division protein A IX92_19975 PF02626 Carboxyltransferase domain, subdomain A and B IX92_19985 PF03746 LamB/YcsF family IX92_19990 PF16363 GDP-mannose 4,6 dehydratase IX92_19995 PF03264 NapC/NirT cytochrome c family, N-terminal region IX92_20000 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) IX92_20005 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IX92_20005 PF00384 Molybdopterin oxidoreductase IX92_20005 PF01568 Molydopterin dinucleotide binding domain IX92_20015 PF12838 4Fe-4S dicluster domain IX92_20015 PF13187 4Fe-4S dicluster domain IX92_20020 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term IX92_20020 PF07730 Histidine kinase IX92_20020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_20020 PF00672 HAMP domain IX92_20025 PF00196 Bacterial regulatory proteins, luxR family IX92_20025 PF00072 Response regulator receiver domain IX92_20030 PF03606 C4-dicarboxylate anaerobic carrier IX92_20050 PF01292 Prokaryotic cytochrome b561 IX92_20055 PF04264 YceI-like domain IX92_20060 PF01226 Formate/nitrite transporter IX92_20065 PF03466 LysR substrate binding domain IX92_20065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_20070 PF06496 Protein of unknown function (DUF1097) IX92_20075 PF11398 Protein of unknown function (DUF2813) IX92_20080 PF00149 Calcineurin-like phosphoesterase IX92_20080 PF02872 5'-nucleotidase, C-terminal domain IX92_20085 PF03741 Integral membrane protein TerC family IX92_20105 PF00563 EAL domain IX92_20105 PF03707 Bacterial signalling protein N terminal repeat IX92_20105 PF00990 Diguanylate cyclase, GGDEF domain IX92_20115 PF00561 alpha/beta hydrolase fold IX92_20145 PF12167 Arm DNA-binding domain IX92_20145 PF00589 Phage integrase family IX92_20170 PF00717 Peptidase S24-like IX92_20225 PF00959 Phage lysozyme IX92_20320 PF17482 Phage tail sheath C-terminal domain IX92_20320 PF04984 Phage tail sheath protein subtilisin-like domain IX92_20365 PF01435 Peptidase family M48 IX92_20370 PF03061 Thioesterase superfamily IX92_20380 PF12793 Sugar transport-related sRNA regulator N-term IX92_20380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX92_20390 PF00593 TonB dependent receptor IX92_20390 PF07715 TonB-dependent Receptor Plug Domain IX92_20395 PF03466 LysR substrate binding domain IX92_20395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_20400 PF13380 CoA binding domain IX92_20400 PF13607 Succinyl-CoA ligase like flavodoxin domain IX92_20400 PF00583 Acetyltransferase (GNAT) family IX92_20405 PF05036 Sporulation related domain IX92_20410 PF01820 D-ala D-ala ligase N-terminus IX92_20410 PF07478 D-ala D-ala ligase C-terminus IX92_20425 PF01253 Translation initiation factor SUI1 IX92_20550 PF00072 Response regulator receiver domain IX92_20550 PF00486 Transcriptional regulatory protein, C terminal IX92_20560 PF02233 NAD(P) transhydrogenase beta subunit IX92_20565 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IX92_20565 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IX92_20565 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IX92_20580 PF00990 Diguanylate cyclase, GGDEF domain IX92_20580 PF08448 PAS fold IX92_20585 PF01590 GAF domain IX92_20585 PF00563 EAL domain IX92_20585 PF00360 Phytochrome region IX92_20585 PF00990 Diguanylate cyclase, GGDEF domain IX92_20595 PF03459 TOBE domain IX92_20595 PF00005 ABC transporter IX92_20600 PF00528 Binding-protein-dependent transport system inner membrane component IX92_20610 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IX92_20610 PF07685 CobB/CobQ-like glutamine amidotransferase domain IX92_20625 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IX92_20625 PF00356 Bacterial regulatory proteins, lacI family IX92_20635 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IX92_20635 PF00381 PTS HPr component phosphorylation site IX92_20640 PF00294 pfkB family carbohydrate kinase IX92_20645 PF02378 Phosphotransferase system, EIIC IX92_20645 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IX92_20650 PF00990 Diguanylate cyclase, GGDEF domain IX92_20650 PF17158 Membrane-associated sensor, integral membrane domain IX92_20655 PF00483 Nucleotidyl transferase IX92_20660 PF12833 Helix-turn-helix domain IX92_20660 PF06719 AraC-type transcriptional regulator N-terminus IX92_20665 PF00465 Iron-containing alcohol dehydrogenase IX92_20680 PF00072 Response regulator receiver domain IX92_20680 PF01627 Hpt domain IX92_20680 PF00512 His Kinase A (phospho-acceptor) domain IX92_20680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_20680 PF00672 HAMP domain IX92_20685 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IX92_20690 PF02142 MGS-like domain IX92_20695 PF00392 Bacterial regulatory proteins, gntR family IX92_20695 PF07702 UTRA domain IX92_20700 PF13378 Enolase C-terminal domain-like IX92_20700 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IX92_20705 PF02378 Phosphotransferase system, EIIC IX92_20705 PF00367 phosphotransferase system, EIIB IX92_20710 PF00294 pfkB family carbohydrate kinase IX92_20715 PF01081 KDPG and KHG aldolase IX92_20725 PF13419 Haloacid dehalogenase-like hydrolase IX92_20740 PF00294 pfkB family carbohydrate kinase IX92_20745 PF13419 Haloacid dehalogenase-like hydrolase IX92_20750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_20750 PF00672 HAMP domain IX92_20750 PF12729 Four helix bundle sensory module for signal transduction IX92_20755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_20755 PF03466 LysR substrate binding domain IX92_20760 PF00291 Pyridoxal-phosphate dependent enzyme IX92_20770 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IX92_20775 PF00873 AcrB/AcrD/AcrF family IX92_20780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IX92_20785 PF00814 Glycoprotease family IX92_20785 PF00583 Acetyltransferase (GNAT) family IX92_20815 PF00270 DEAD/DEAH box helicase IX92_20815 PF00271 Helicase conserved C-terminal domain IX92_20820 PF04336 Acyl carrier protein phosphodiesterase IX92_20825 PF03222 Tryptophan/tyrosine permease family IX92_20830 PF01641 SelR domain IX92_20830 PF01625 Peptide methionine sulfoxide reductase IX92_20840 PF00271 Helicase conserved C-terminal domain IX92_20840 PF00270 DEAD/DEAH box helicase IX92_20840 PF03880 DbpA RNA binding domain IX92_20845 PF01227 GTP cyclohydrolase I IX92_20850 PF03454 MoeA C-terminal region (domain IV) IX92_20850 PF00994 Probable molybdopterin binding domain IX92_20850 PF03453 MoeA N-terminal region (domain I and II) IX92_20855 PF00899 ThiF family IX92_20865 PF00581 Rhodanese-like domain IX92_20880 PF03466 LysR substrate binding domain IX92_20880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_20890 PF00923 Transaldolase/Fructose-6-phosphate aldolase IX92_20895 PF00456 Transketolase, thiamine diphosphate binding domain IX92_20895 PF02780 Transketolase, C-terminal domain IX92_20895 PF02779 Transketolase, pyrimidine binding domain IX92_20900 PF01037 Lrp/AsnC ligand binding domain IX92_20915 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IX92_20920 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IX92_20925 PF03480 Bacterial extracellular solute-binding protein, family 7 IX92_20930 PF07687 Peptidase dimerisation domain IX92_20930 PF01546 Peptidase family M20/M25/M40 IX92_20940 PF01037 Lrp/AsnC ligand binding domain IX92_20945 PF00291 Pyridoxal-phosphate dependent enzyme IX92_20950 PF00672 HAMP domain IX92_20950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_20955 PF07694 5TMR of 5TMR-LYT IX92_20955 PF00990 Diguanylate cyclase, GGDEF domain IX92_20965 PF03707 Bacterial signalling protein N terminal repeat IX92_20965 PF00563 EAL domain IX92_20965 PF00990 Diguanylate cyclase, GGDEF domain IX92_20975 PF04229 GrpB protein IX92_20985 PF01926 50S ribosome-binding GTPase IX92_20990 PF07683 Cobalamin synthesis protein cobW C-terminal domain IX92_20990 PF02492 CobW/HypB/UreG, nucleotide-binding domain IX92_20995 PF00654 Voltage gated chloride channel IX92_21005 PF00155 Aminotransferase class I and II IX92_21010 PF00072 Response regulator receiver domain IX92_21010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_21015 PF13476 AAA domain IX92_21020 PF00149 Calcineurin-like phosphoesterase IX92_21020 PF12320 Type 5 capsule protein repressor C-terminal domain IX92_21025 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IX92_21025 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IX92_21030 PF00085 Thioredoxin IX92_21035 PF07690 Major Facilitator Superfamily IX92_21050 PF00355 Rieske [2Fe-2S] domain IX92_21055 PF13806 Rieske-like [2Fe-2S] domain IX92_21055 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IX92_21055 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX92_21055 PF04324 BFD-like [2Fe-2S] binding domain IX92_21055 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IX92_21055 PF18267 Rubredoxin NAD+ reductase C-terminal domain IX92_21060 PF00005 ABC transporter IX92_21065 PF00528 Binding-protein-dependent transport system inner membrane component IX92_21070 PF00005 ABC transporter IX92_21075 PF03861 ANTAR domain IX92_21075 PF00072 Response regulator receiver domain IX92_21080 PF00591 Glycosyl transferase family, a/b domain IX92_21080 PF02885 Glycosyl transferase family, helical bundle domain IX92_21085 PF14824 Sirohaem biosynthesis protein central IX92_21085 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IX92_21085 PF10414 Sirohaem synthase dimerisation region IX92_21090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IX92_21090 PF01568 Molydopterin dinucleotide binding domain IX92_21090 PF00384 Molybdopterin oxidoreductase IX92_21130 PF04237 YjbR IX92_21140 PF00990 Diguanylate cyclase, GGDEF domain IX92_21140 PF13185 GAF domain IX92_21145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_21145 PF00672 HAMP domain IX92_21150 PF00676 Dehydrogenase E1 component IX92_21155 PF02780 Transketolase, C-terminal domain IX92_21155 PF02779 Transketolase, pyrimidine binding domain IX92_21160 PF02817 e3 binding domain IX92_21160 PF00364 Biotin-requiring enzyme IX92_21160 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IX92_21165 PF00990 Diguanylate cyclase, GGDEF domain IX92_21170 PF00766 Electron transfer flavoprotein FAD-binding domain IX92_21170 PF01012 Electron transfer flavoprotein domain IX92_21175 PF01012 Electron transfer flavoprotein domain IX92_21185 PF00127 Copper binding proteins, plastocyanin/azurin family IX92_21195 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IX92_21195 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IX92_21200 PF00378 Enoyl-CoA hydratase/isomerase IX92_21205 PF00378 Enoyl-CoA hydratase/isomerase IX92_21210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX92_21210 PF02770 Acyl-CoA dehydrogenase, middle domain IX92_21210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX92_21215 PF00171 Aldehyde dehydrogenase family IX92_21220 PF00108 Thiolase, N-terminal domain IX92_21220 PF02803 Thiolase, C-terminal domain IX92_21225 PF09278 MerR, DNA binding IX92_21225 PF00376 MerR family regulatory protein IX92_21230 PF02770 Acyl-CoA dehydrogenase, middle domain IX92_21230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX92_21230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX92_21235 PF01039 Carboxyl transferase domain IX92_21240 PF00378 Enoyl-CoA hydratase/isomerase IX92_21245 PF00682 HMGL-like IX92_21265 PF01810 LysE type translocator IX92_21270 PF07681 DoxX IX92_21275 PF02678 Pirin IX92_21275 PF17954 Quercetinase C-terminal cupin domain IX92_21290 PF01235 Sodium:alanine symporter family IX92_21295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_21295 PF03466 LysR substrate binding domain IX92_21300 PF13460 NAD(P)H-binding IX92_21320 PF00563 EAL domain IX92_21320 PF00990 Diguanylate cyclase, GGDEF domain IX92_21320 PF00498 FHA domain IX92_21350 PF18416 N-acetylglucosamine binding protein domain 2 IX92_21350 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading IX92_21375 PF00579 tRNA synthetases class I (W and Y) IX92_21380 PF00551 Formyl transferase IX92_21385 PF01810 LysE type translocator IX92_21390 PF03466 LysR substrate binding domain IX92_21390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_21395 PF00871 Acetokinase family IX92_21400 PF00563 EAL domain IX92_21400 PF03707 Bacterial signalling protein N terminal repeat IX92_21400 PF00990 Diguanylate cyclase, GGDEF domain IX92_21410 PF07715 TonB-dependent Receptor Plug Domain IX92_21410 PF00593 TonB dependent receptor IX92_21425 PF13411 MerR HTH family regulatory protein IX92_21435 PF00929 Exonuclease IX92_21435 PF07733 Bacterial DNA polymerase III alpha NTPase domain IX92_21435 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IX92_21435 PF02811 PHP domain IX92_21435 PF14579 Helix-hairpin-helix motif IX92_21440 PF02028 BCCT, betaine/carnitine/choline family transporter IX92_21445 PF01047 MarR family IX92_21450 PF05230 MASE2 domain IX92_21450 PF00990 Diguanylate cyclase, GGDEF domain IX92_21455 PF01037 Lrp/AsnC ligand binding domain IX92_21475 PF07690 Major Facilitator Superfamily IX92_21480 PF05762 VWA domain containing CoxE-like protein IX92_21485 PF17868 AAA lid domain IX92_21485 PF07728 AAA domain (dynein-related subfamily) IX92_21485 PF12592 Protein of unknown function (DUF3763) IX92_21490 PF00293 NUDIX domain IX92_21495 PF01212 Beta-eliminating lyase IX92_21505 PF00704 Glycosyl hydrolases family 18 IX92_21505 PF08329 Chitinase A, N-terminal domain IX92_21520 PF01584 CheW-like domain IX92_21520 PF00072 Response regulator receiver domain IX92_21525 PF00990 Diguanylate cyclase, GGDEF domain IX92_21550 PF03313 Serine dehydratase alpha chain IX92_21550 PF03315 Serine dehydratase beta chain IX92_21555 PF03466 LysR substrate binding domain IX92_21555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_21560 PF01266 FAD dependent oxidoreductase IX92_21565 PF18027 Cytosolic carboxypeptidase N-terminal domain IX92_21565 PF00246 Zinc carboxypeptidase IX92_21570 PF00854 POT family IX92_21585 PF00392 Bacterial regulatory proteins, gntR family IX92_21585 PF07702 UTRA domain IX92_21590 PF00528 Binding-protein-dependent transport system inner membrane component IX92_21595 PF00005 ABC transporter IX92_21610 PF00266 Aminotransferase class-V IX92_21620 PF13419 Haloacid dehalogenase-like hydrolase IX92_21635 PF08279 HTH domain IX92_21635 PF13280 WYL domain IX92_21645 PF13419 Haloacid dehalogenase-like hydrolase IX92_21650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_21650 PF03466 LysR substrate binding domain IX92_21660 PF00465 Iron-containing alcohol dehydrogenase IX92_21675 PF13407 Periplasmic binding protein domain IX92_21705 PF07549 SecD/SecF GG Motif IX92_21705 PF02355 Protein export membrane protein IX92_21710 PF07549 SecD/SecF GG Motif IX92_21710 PF13721 SecD export protein N-terminal TM region IX92_21710 PF02355 Protein export membrane protein IX92_21750 PF01329 Pterin 4 alpha carbinolamine dehydratase IX92_21755 PF00351 Biopterin-dependent aromatic amino acid hydroxylase IX92_21760 PF00501 AMP-binding enzyme IX92_21760 PF13193 AMP-binding enzyme C-terminal domain IX92_21770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_21770 PF03466 LysR substrate binding domain IX92_21780 PF00512 His Kinase A (phospho-acceptor) domain IX92_21780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_21780 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IX92_21780 PF00072 Response regulator receiver domain IX92_21780 PF00672 HAMP domain IX92_21780 PF01627 Hpt domain IX92_21785 PF00072 Response regulator receiver domain IX92_21785 PF00512 His Kinase A (phospho-acceptor) domain IX92_21785 PF09456 RcsC Alpha-Beta-Loop (ABL) IX92_21785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_21790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_21790 PF00512 His Kinase A (phospho-acceptor) domain IX92_21790 PF00072 Response regulator receiver domain IX92_21790 PF09456 RcsC Alpha-Beta-Loop (ABL) IX92_21795 PF05193 Peptidase M16 inactive domain IX92_21795 PF00675 Insulinase (Peptidase family M16) IX92_21805 PF01758 Sodium Bile acid symporter family IX92_21820 PF07687 Peptidase dimerisation domain IX92_21820 PF01546 Peptidase family M20/M25/M40 IX92_21830 PF01773 Na+ dependent nucleoside transporter N-terminus IX92_21830 PF07662 Na+ dependent nucleoside transporter C-terminus IX92_21830 PF07670 Nucleoside recognition IX92_21845 PF00194 Eukaryotic-type carbonic anhydrase IX92_21860 PF00107 Zinc-binding dehydrogenase IX92_21860 PF08240 Alcohol dehydrogenase GroES-like domain IX92_21865 PF00155 Aminotransferase class I and II IX92_21870 PF00563 EAL domain IX92_21870 PF00990 Diguanylate cyclase, GGDEF domain IX92_21870 PF13426 PAS domain IX92_21885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_21885 PF03466 LysR substrate binding domain IX92_21890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IX92_21900 PF06123 Inner membrane protein CreD IX92_21905 PF00672 HAMP domain IX92_21905 PF00512 His Kinase A (phospho-acceptor) domain IX92_21905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_21910 PF00072 Response regulator receiver domain IX92_21910 PF00486 Transcriptional regulatory protein, C terminal IX92_21920 PF03150 Di-haem cytochrome c peroxidase IX92_21925 PF00486 Transcriptional regulatory protein, C terminal IX92_21925 PF00072 Response regulator receiver domain IX92_21930 PF00672 HAMP domain IX92_21930 PF00512 His Kinase A (phospho-acceptor) domain IX92_21930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_21935 PF00892 EamA-like transporter family IX92_21945 PF00248 Aldo/keto reductase family IX92_21950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_21950 PF03466 LysR substrate binding domain IX92_21960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_21960 PF00672 HAMP domain IX92_21960 PF02743 Cache domain IX92_21965 PF17863 AAA lid domain IX92_21965 PF07726 ATPase family associated with various cellular activities (AAA) IX92_21970 PF01882 Protein of unknown function DUF58 IX92_21980 PF07584 Aerotolerance regulator N-terminal IX92_21980 PF00092 von Willebrand factor type A domain IX92_21985 PF13519 von Willebrand factor type A domain IX92_21985 PF07584 Aerotolerance regulator N-terminal IX92_22000 PF00892 EamA-like transporter family IX92_22005 PF12464 Maltose acetyltransferase IX92_22005 PF14602 Hexapeptide repeat of succinyl-transferase IX92_22010 PF02566 OsmC-like protein IX92_22015 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IX92_22025 PF03466 LysR substrate binding domain IX92_22025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_22035 PF13520 Amino acid permease IX92_22045 PF00155 Aminotransferase class I and II IX92_22045 PF00392 Bacterial regulatory proteins, gntR family IX92_22055 PF00672 HAMP domain IX92_22055 PF00512 His Kinase A (phospho-acceptor) domain IX92_22055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_22060 PF00486 Transcriptional regulatory protein, C terminal IX92_22060 PF00072 Response regulator receiver domain IX92_22085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IX92_22085 PF00529 HlyD membrane-fusion protein of T1SS IX92_22090 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IX92_22095 PF07969 Amidohydrolase family IX92_22100 PF03741 Integral membrane protein TerC family IX92_22105 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IX92_22110 PF00512 His Kinase A (phospho-acceptor) domain IX92_22110 PF01627 Hpt domain IX92_22110 PF00072 Response regulator receiver domain IX92_22110 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IX92_22110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_22110 PF00672 HAMP domain IX92_22125 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IX92_22125 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IX92_22150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX92_22150 PF12793 Sugar transport-related sRNA regulator N-term IX92_22160 PF00528 Binding-protein-dependent transport system inner membrane component IX92_22165 PF00528 Binding-protein-dependent transport system inner membrane component IX92_22165 PF14785 Maltose transport system permease protein MalF P2 domain IX92_22170 PF01547 Bacterial extracellular solute-binding protein IX92_22175 PF00005 ABC transporter IX92_22175 PF08402 TOBE domain IX92_22180 PF01923 Cobalamin adenosyltransferase IX92_22185 PF01243 Pyridoxamine 5'-phosphate oxidase IX92_22190 PF06228 Haem utilisation ChuX/HutX IX92_22195 PF04055 Radical SAM superfamily IX92_22200 PF03544 Gram-negative bacterial TonB protein C-terminal IX92_22205 PF01618 MotA/TolQ/ExbB proton channel family IX92_22210 PF02472 Biopolymer transport protein ExbD/TolR IX92_22220 PF01032 FecCD transport family IX92_22225 PF00005 ABC transporter IX92_22230 PF07690 Major Facilitator Superfamily IX92_22235 PF12833 Helix-turn-helix domain IX92_22240 PF01476 LysM domain IX92_22240 PF08525 Opacity-associated protein A N-terminal motif IX92_22240 PF01551 Peptidase family M23 IX92_22255 PF12849 PBP superfamily domain IX92_22265 PF00773 RNB domain IX92_22265 PF08206 Ribonuclease B OB domain IX92_22265 PF00575 S1 RNA binding domain IX92_22270 PF01593 Flavin containing amine oxidoreductase IX92_22275 PF00271 Helicase conserved C-terminal domain IX92_22275 PF00270 DEAD/DEAH box helicase IX92_22275 PF03880 DbpA RNA binding domain IX92_22285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_22285 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX92_22285 PF00512 His Kinase A (phospho-acceptor) domain IX92_22290 PF11849 Domain of unknown function (DUF3369) IX92_22295 PF00356 Bacterial regulatory proteins, lacI family IX92_22300 PF00294 pfkB family carbohydrate kinase IX92_22305 PF13407 Periplasmic binding protein domain IX92_22310 PF02653 Branched-chain amino acid transport system / permease component IX92_22315 PF00005 ABC transporter IX92_22320 PF05025 RbsD / FucU transport protein family IX92_22330 PF00704 Glycosyl hydrolases family 18 IX92_22340 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IX92_22340 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IX92_22340 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IX92_22345 PF00909 Ammonium Transporter Family IX92_22370 PF00392 Bacterial regulatory proteins, gntR family IX92_22370 PF00155 Aminotransferase class I and II IX92_22385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IX92_22390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IX92_22390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IX92_22395 PF01661 Macro domain IX92_22425 PF03824 High-affinity nickel-transport protein IX92_22430 PF00005 ABC transporter IX92_22435 PF01497 Periplasmic binding protein IX92_22440 PF01032 FecCD transport family IX92_22445 PF03413 Peptidase propeptide and YPEB domain IX92_22445 PF07504 Fungalysin/Thermolysin Propeptide Motif IX92_22445 PF04151 Bacterial pre-peptidase C-terminal domain IX92_22445 PF01447 Thermolysin metallopeptidase, catalytic domain IX92_22445 PF02868 Thermolysin metallopeptidase, alpha-helical domain IX92_22460 PF00356 Bacterial regulatory proteins, lacI family IX92_22460 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IX92_22465 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain IX92_22465 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IX92_22470 PF01202 Shikimate kinase IX92_22475 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IX92_22485 PF03480 Bacterial extracellular solute-binding protein, family 7 IX92_22495 PF03707 Bacterial signalling protein N terminal repeat IX92_22495 PF00563 EAL domain IX92_22495 PF00990 Diguanylate cyclase, GGDEF domain IX92_22510 PF03466 LysR substrate binding domain IX92_22510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_22515 PF00990 Diguanylate cyclase, GGDEF domain IX92_22515 PF00563 EAL domain IX92_22515 PF03707 Bacterial signalling protein N terminal repeat IX92_22530 PF03109 ABC1 family IX92_22540 PF00924 Mechanosensitive ion channel IX92_22550 PF12706 Beta-lactamase superfamily domain IX92_22560 PF02397 Bacterial sugar transferase IX92_22570 PF02563 Polysaccharide biosynthesis/export protein IX92_22570 PF10531 SLBB domain IX92_22570 PF18412 Outer-membrane lipoprotein Wza C-terminal domain IX92_22575 PF13614 AAA domain IX92_22575 PF13807 G-rich domain on putative tyrosine kinase IX92_22575 PF02706 Chain length determinant protein IX92_22600 PF00085 Thioredoxin IX92_22605 PF11412 Disulphide bond corrector protein DsbC IX92_22605 PF02683 Cytochrome C biogenesis protein transmembrane region IX92_22620 PF01810 LysE type translocator IX92_22625 PF12833 Helix-turn-helix domain IX92_22640 PF01557 Fumarylacetoacetate (FAA) hydrolase family IX92_22650 PF00012 Hsp70 protein IX92_22655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_22655 PF03466 LysR substrate binding domain IX92_22665 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IX92_22665 PF13378 Enolase C-terminal domain-like IX92_22680 PF13458 Periplasmic binding protein IX92_22685 PF00990 Diguanylate cyclase, GGDEF domain IX92_22685 PF17158 Membrane-associated sensor, integral membrane domain IX92_22695 PF08521 Two-component sensor kinase N-terminal IX92_22695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_22695 PF00512 His Kinase A (phospho-acceptor) domain IX92_22700 PF00072 Response regulator receiver domain IX92_22700 PF00486 Transcriptional regulatory protein, C terminal IX92_22705 PF17837 4'-phosphopantetheinyl transferase N-terminal domain IX92_22705 PF01648 4'-phosphopantetheinyl transferase superfamily IX92_22710 PF13533 Biotin-lipoyl like IX92_22715 PF00107 Zinc-binding dehydrogenase IX92_22715 PF16884 N-terminal domain of oxidoreductase IX92_22725 PF07690 Major Facilitator Superfamily IX92_22730 PF00550 Phosphopantetheine attachment site IX92_22730 PF00668 Condensation domain IX92_22730 PF00975 Thioesterase domain IX92_22730 PF00501 AMP-binding enzyme IX92_22730 PF13193 AMP-binding enzyme C-terminal domain IX92_22735 PF00550 Phosphopantetheine attachment site IX92_22735 PF02801 Beta-ketoacyl synthase, C-terminal domain IX92_22735 PF00109 Beta-ketoacyl synthase, N-terminal domain IX92_22735 PF16197 Ketoacyl-synthetase C-terminal extension IX92_22735 PF00668 Condensation domain IX92_22735 PF00698 Acyl transferase domain IX92_22740 PF00550 Phosphopantetheine attachment site IX92_22740 PF00668 Condensation domain IX92_22740 PF13193 AMP-binding enzyme C-terminal domain IX92_22740 PF00501 AMP-binding enzyme IX92_22745 PF13193 AMP-binding enzyme C-terminal domain IX92_22745 PF00501 AMP-binding enzyme IX92_22745 PF00550 Phosphopantetheine attachment site IX92_22745 PF00668 Condensation domain IX92_22745 PF00975 Thioesterase domain IX92_22750 PF00975 Thioesterase domain IX92_22750 PF00501 AMP-binding enzyme IX92_22750 PF00550 Phosphopantetheine attachment site IX92_22750 PF00668 Condensation domain IX92_22750 PF13193 AMP-binding enzyme C-terminal domain IX92_22755 PF00891 O-methyltransferase domain IX92_22760 PF01554 MatE IX92_22765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX92_22765 PF00005 ABC transporter IX92_22770 PF00005 ABC transporter IX92_22770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX92_22775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX92_22780 PF00528 Binding-protein-dependent transport system inner membrane component IX92_22785 PF02225 PA domain IX92_22785 PF04389 Peptidase family M28 IX92_22790 PF02903 Alpha amylase, N-terminal ig-like domain IX92_22790 PF16657 Maltogenic Amylase, C-terminal domain IX92_22790 PF00128 Alpha amylase, catalytic domain IX92_22795 PF00128 Alpha amylase, catalytic domain IX92_22795 PF02903 Alpha amylase, N-terminal ig-like domain IX92_22815 PF01810 LysE type translocator IX92_22825 PF04397 LytTr DNA-binding domain IX92_22825 PF00072 Response regulator receiver domain IX92_22830 PF07694 5TMR of 5TMR-LYT IX92_22830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_22830 PF06580 Histidine kinase IX92_22845 PF02687 FtsX-like permease family IX92_22845 PF12704 MacB-like periplasmic core domain IX92_22850 PF00005 ABC transporter IX92_22865 PF00171 Aldehyde dehydrogenase family IX92_22870 PF10137 Predicted nucleotide-binding protein containing TIR-like domain IX92_22880 PF12843 Putative quorum-sensing-regulated virulence factor IX92_22895 PF00768 D-alanyl-D-alanine carboxypeptidase IX92_22895 PF07943 Penicillin-binding protein 5, C-terminal domain IX92_22910 PF03889 Alternative ribosome-rescue factor A IX92_22915 PF00313 'Cold-shock' DNA-binding domain IX92_22930 PF00970 Oxidoreductase FAD-binding domain IX92_22930 PF00175 Oxidoreductase NAD-binding domain IX92_22930 PF00042 Globin IX92_22935 PF01590 GAF domain IX92_22935 PF00158 Sigma-54 interaction domain IX92_22945 PF13419 Haloacid dehalogenase-like hydrolase IX92_22950 PF02525 Flavodoxin-like fold IX92_22955 PF02254 TrkA-N domain IX92_22955 PF00999 Sodium/hydrogen exchanger family IX92_22960 PF01554 MatE IX92_22970 PF00892 EamA-like transporter family IX92_22975 PF00462 Glutaredoxin IX92_22985 PF07690 Major Facilitator Superfamily IX92_22990 PF03466 LysR substrate binding domain IX92_22990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_22995 PF08448 PAS fold IX92_22995 PF08447 PAS fold IX92_22995 PF00563 EAL domain IX92_22995 PF00990 Diguanylate cyclase, GGDEF domain IX92_23010 PF02540 NAD synthase IX92_23015 PF00196 Bacterial regulatory proteins, luxR family IX92_23030 PF07968 Leukocidin/Hemolysin toxin family IX92_23030 PF12563 Hemolytic toxin N terminal IX92_23030 PF16458 Beta-prism lectin IX92_23045 PF03808 Glycosyl transferase WecB/TagA/CpsF family IX92_23055 PF00534 Glycosyl transferases group 1 IX92_23055 PF13439 Glycosyltransferase Family 4 IX92_23065 PF00132 Bacterial transferase hexapeptide (six repeats) IX92_23080 PF00534 Glycosyl transferases group 1 IX92_23085 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IX92_23085 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IX92_23085 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IX92_23090 PF02350 UDP-N-acetylglucosamine 2-epimerase IX92_23095 PF01451 Low molecular weight phosphotyrosine protein phosphatase IX92_23100 PF03605 Anaerobic c4-dicarboxylate membrane transporter IX92_23110 PF00990 Diguanylate cyclase, GGDEF domain IX92_23110 PF00563 EAL domain IX92_23110 PF00360 Phytochrome region IX92_23110 PF01590 GAF domain IX92_23115 PF00248 Aldo/keto reductase family IX92_23125 PF00128 Alpha amylase, catalytic domain IX92_23135 PF00793 DAHP synthetase I family IX92_23140 PF00005 ABC transporter IX92_23145 PF00528 Binding-protein-dependent transport system inner membrane component IX92_23150 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX92_23155 PF00528 Binding-protein-dependent transport system inner membrane component IX92_23160 PF01040 UbiA prenyltransferase family IX92_23185 PF00510 Cytochrome c oxidase subunit III IX92_23190 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 IX92_23195 PF00115 Cytochrome C and Quinol oxidase polypeptide I IX92_23200 PF02790 Cytochrome C oxidase subunit II, transmembrane domain IX92_23200 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IX92_23210 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IX92_23210 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IX92_23210 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IX92_23210 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IX92_23215 PF00892 EamA-like transporter family IX92_23235 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IX92_23235 PF00391 PEP-utilising enzyme, mobile domain IX92_23235 PF02896 PEP-utilising enzyme, TIM barrel domain IX92_23250 PF00175 Oxidoreductase NAD-binding domain IX92_23250 PF00970 Oxidoreductase FAD-binding domain IX92_23275 PF00873 AcrB/AcrD/AcrF family IX92_23290 PF05726 Pirin C-terminal cupin domain IX92_23290 PF02678 Pirin IX92_23295 PF00132 Bacterial transferase hexapeptide (six repeats) IX92_23300 PF07690 Major Facilitator Superfamily IX92_23305 PF07943 Penicillin-binding protein 5, C-terminal domain IX92_23305 PF00768 D-alanyl-D-alanine carboxypeptidase IX92_23310 PF08245 Mur ligase middle domain IX92_23310 PF02875 Mur ligase family, glutamate ligase domain IX92_23310 PF01225 Mur ligase family, catalytic domain IX92_23315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_23315 PF03466 LysR substrate binding domain IX92_23320 PF00561 alpha/beta hydrolase fold IX92_23350 PF03741 Integral membrane protein TerC family IX92_23350 PF03471 Transporter associated domain IX92_23370 PF00282 Pyridoxal-dependent decarboxylase conserved domain IX92_23380 PF00440 Bacterial regulatory proteins, tetR family IX92_23380 PF02909 Tetracyclin repressor-like, C-terminal domain IX92_23385 PF03466 LysR substrate binding domain IX92_23385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_23390 PF01810 LysE type translocator IX92_23395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_23395 PF03466 LysR substrate binding domain IX92_23405 PF00472 RF-1 domain IX92_23450 PF01979 Amidohydrolase family IX92_23455 PF00132 Bacterial transferase hexapeptide (six repeats) IX92_23460 PF07683 Cobalamin synthesis protein cobW C-terminal domain IX92_23460 PF02492 CobW/HypB/UreG, nucleotide-binding domain IX92_23465 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IX92_23510 PF01047 MarR family IX92_23520 PF01810 LysE type translocator IX92_23525 PF12833 Helix-turn-helix domain IX92_23535 PF00528 Binding-protein-dependent transport system inner membrane component IX92_23540 PF00005 ABC transporter IX92_23540 PF08402 TOBE domain IX92_23545 PF00701 Dihydrodipicolinate synthetase family IX92_23550 PF02423 Ornithine cyclodeaminase/mu-crystallin family IX92_23560 PF01266 FAD dependent oxidoreductase IX92_23565 PF05544 Proline racemase IX92_23570 PF00171 Aldehyde dehydrogenase family IX92_23575 PF07729 FCD domain IX92_23575 PF00392 Bacterial regulatory proteins, gntR family IX92_23585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX92_23590 PF00528 Binding-protein-dependent transport system inner membrane component IX92_23595 PF12911 N-terminal TM domain of oligopeptide transport permease C IX92_23595 PF00528 Binding-protein-dependent transport system inner membrane component IX92_23600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX92_23600 PF00005 ABC transporter IX92_23605 PF00005 ABC transporter IX92_23605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX92_23610 PF00557 Metallopeptidase family M24 IX92_23610 PF05195 Aminopeptidase P, N-terminal domain IX92_23635 PF01752 Collagenase IX92_23635 PF08453 Peptidase family M9 N-terminal IX92_23635 PF04151 Bacterial pre-peptidase C-terminal domain IX92_23645 PF03372 Endonuclease/Exonuclease/phosphatase family IX92_23650 PF01752 Collagenase IX92_23650 PF08453 Peptidase family M9 N-terminal IX92_23655 PF00271 Helicase conserved C-terminal domain IX92_23655 PF00270 DEAD/DEAH box helicase IX92_23665 PF17969 L,D-transpeptidase C-terminal domain IX92_23665 PF03734 L,D-transpeptidase catalytic domain IX92_23665 PF01476 LysM domain IX92_23670 PF03441 FAD binding domain of DNA photolyase IX92_23670 PF00875 DNA photolyase IX92_23675 PF13411 MerR HTH family regulatory protein IX92_23680 PF08349 Protein of unknown function (DUF1722) IX92_23685 PF01048 Phosphorylase superfamily IX92_23700 PF00990 Diguanylate cyclase, GGDEF domain IX92_23710 PF11742 Protein of unknown function (DUF3302) IX92_23715 PF00529 HlyD membrane-fusion protein of T1SS IX92_23715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IX92_23720 PF03616 Sodium/glutamate symporter IX92_23730 PF00202 Aminotransferase class-III IX92_23745 PF03466 LysR substrate binding domain IX92_23745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_23755 PF00005 ABC transporter IX92_23755 PF00664 ABC transporter transmembrane region IX92_23765 PF01037 Lrp/AsnC ligand binding domain IX92_23775 PF00474 Sodium:solute symporter family IX92_23785 PF14850 DNA-binding domain of Proline dehydrogenase IX92_23785 PF18327 Proline utilization A proline dehydrogenase N-terminal domain IX92_23785 PF01619 Proline dehydrogenase IX92_23785 PF00171 Aldehyde dehydrogenase family IX92_23790 PF12833 Helix-turn-helix domain IX92_23800 PF03781 Sulfatase-modifying factor enzyme 1 IX92_23810 PF01243 Pyridoxamine 5'-phosphate oxidase IX92_23810 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IX92_23815 PF00529 HlyD membrane-fusion protein of T1SS IX92_23830 PF03412 Peptidase C39 family IX92_23830 PF00005 ABC transporter IX92_23830 PF00664 ABC transporter transmembrane region IX92_23835 PF08329 Chitinase A, N-terminal domain IX92_23835 PF00704 Glycosyl hydrolases family 18 IX92_23840 PF01212 Beta-eliminating lyase IX92_23845 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) IX92_23850 PF01966 HD domain IX92_23855 PF13302 Acetyltransferase (GNAT) domain IX92_23865 PF02630 SCO1/SenC IX92_23875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_23875 PF03466 LysR substrate binding domain IX92_23880 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 IX92_23885 PF01906 Putative heavy-metal-binding IX92_23890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_23890 PF03466 LysR substrate binding domain IX92_23895 PF07690 Major Facilitator Superfamily IX92_23910 PF00455 DeoR C terminal sensor domain IX92_23910 PF08220 DeoR-like helix-turn-helix domain IX92_23915 PF03009 Glycerophosphoryl diester phosphodiesterase family IX92_23920 PF03480 Bacterial extracellular solute-binding protein, family 7 IX92_23930 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IX92_23950 PF03466 LysR substrate binding domain IX92_23950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_23970 PF01464 Transglycosylase SLT domain IX92_23970 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX92_24115 PF00072 Response regulator receiver domain IX92_24115 PF02954 Bacterial regulatory protein, Fis family IX92_24115 PF00158 Sigma-54 interaction domain IX92_24120 PF00375 Sodium:dicarboxylate symporter family IX92_24130 PF05922 Peptidase inhibitor I9 IX92_24130 PF00082 Subtilase family IX92_24130 PF04151 Bacterial pre-peptidase C-terminal domain IX92_24135 PF07715 TonB-dependent Receptor Plug Domain IX92_24135 PF00593 TonB dependent receptor IX92_24140 PF12833 Helix-turn-helix domain IX92_24155 PF07670 Nucleoside recognition IX92_24160 PF07670 Nucleoside recognition IX92_24165 PF03600 Citrate transporter IX92_24175 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IX92_24175 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IX92_24180 PF06029 AlkA N-terminal domain IX92_24180 PF00730 HhH-GPD superfamily base excision DNA repair protein IX92_24195 PF01627 Hpt domain IX92_24195 PF00512 His Kinase A (phospho-acceptor) domain IX92_24195 PF00072 Response regulator receiver domain IX92_24195 PF00989 PAS fold IX92_24195 PF18415 Histidine kinase receptor ArcB trans-membrane domain IX92_24195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_24200 PF00486 Transcriptional regulatory protein, C terminal IX92_24200 PF00072 Response regulator receiver domain IX92_24205 PF13533 Biotin-lipoyl like IX92_24210 PF00873 AcrB/AcrD/AcrF family IX92_24215 PF02525 Flavodoxin-like fold IX92_24220 PF03466 LysR substrate binding domain IX92_24220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_24240 PF00072 Response regulator receiver domain IX92_24240 PF00486 Transcriptional regulatory protein, C terminal IX92_24245 PF00512 His Kinase A (phospho-acceptor) domain IX92_24245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_24250 PF00939 Sodium:sulfate symporter transmembrane region IX92_24290 PF08281 Sigma-70, region 4 IX92_24290 PF04542 Sigma-70 region 2 IX92_24305 PF00892 EamA-like transporter family IX92_24310 PF01042 Endoribonuclease L-PSP IX92_24315 PF00892 EamA-like transporter family IX92_24325 PF01588 Putative tRNA binding domain IX92_24325 PF09334 tRNA synthetases class I (M) IX92_24325 PF08264 Anticodon-binding domain of tRNA IX92_24345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_24345 PF03466 LysR substrate binding domain IX92_24360 PF03466 LysR substrate binding domain IX92_24360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_24370 PF00563 EAL domain IX92_24370 PF13185 GAF domain IX92_24370 PF00990 Diguanylate cyclase, GGDEF domain IX92_24380 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IX92_24380 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IX92_24380 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IX92_24380 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IX92_24385 PF08402 TOBE domain IX92_24385 PF00005 ABC transporter IX92_24390 PF00528 Binding-protein-dependent transport system inner membrane component IX92_24405 PF00480 ROK family IX92_24415 PF00534 Glycosyl transferases group 1 IX92_24425 PF01569 PAP2 superfamily IX92_24435 PF06445 GyrI-like small molecule binding domain IX92_24435 PF12833 Helix-turn-helix domain IX92_24455 PF03070 TENA/THI-4/PQQC family IX92_24460 PF09084 NMT1/THI5 like IX92_24465 PF00528 Binding-protein-dependent transport system inner membrane component IX92_24470 PF00005 ABC transporter IX92_24475 PF08543 Phosphomethylpyrimidine kinase IX92_24480 PF00248 Aldo/keto reductase family IX92_24485 PF00698 Acyl transferase domain IX92_24485 PF16197 Ketoacyl-synthetase C-terminal extension IX92_24485 PF00109 Beta-ketoacyl synthase, N-terminal domain IX92_24485 PF08240 Alcohol dehydrogenase GroES-like domain IX92_24485 PF02801 Beta-ketoacyl synthase, C-terminal domain IX92_24485 PF08659 KR domain IX92_24485 PF00550 Phosphopantetheine attachment site IX92_24485 PF14765 Polyketide synthase dehydratase IX92_24500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_24500 PF03466 LysR substrate binding domain IX92_24510 PF01168 Alanine racemase, N-terminal domain IX92_24510 PF14031 Putative serine dehydratase domain IX92_24520 PF02743 Cache domain IX92_24520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_24520 PF00672 HAMP domain IX92_24525 PF00905 Penicillin binding protein transpeptidase domain IX92_24525 PF03717 Penicillin-binding Protein dimerisation domain IX92_24530 PF00232 Glycosyl hydrolase family 1 IX92_24540 PF00582 Universal stress protein family IX92_24545 PF03459 TOBE domain IX92_24545 PF17912 MalK OB fold domain IX92_24545 PF00005 ABC transporter IX92_24550 PF13419 Haloacid dehalogenase-like hydrolase IX92_24565 PF00528 Binding-protein-dependent transport system inner membrane component IX92_24570 PF00528 Binding-protein-dependent transport system inner membrane component IX92_24575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_24575 PF03466 LysR substrate binding domain IX92_24580 PF00893 Small Multidrug Resistance protein IX92_24590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IX92_24590 PF00529 HlyD membrane-fusion protein of T1SS IX92_24605 PF07690 Major Facilitator Superfamily IX92_24620 PF13419 Haloacid dehalogenase-like hydrolase IX92_24635 PF00155 Aminotransferase class I and II IX92_24655 PF00990 Diguanylate cyclase, GGDEF domain IX92_24655 PF00072 Response regulator receiver domain IX92_24665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_24665 PF02743 Cache domain IX92_24665 PF00672 HAMP domain IX92_24670 PF00072 Response regulator receiver domain IX92_24670 PF01339 CheB methylesterase IX92_24675 PF03975 CheD chemotactic sensory transduction IX92_24680 PF03705 CheR methyltransferase, all-alpha domain IX92_24680 PF01739 CheR methyltransferase, SAM binding domain IX92_24685 PF00672 HAMP domain IX92_24685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_24685 PF02203 Tar ligand binding domain homologue IX92_24690 PF01584 CheW-like domain IX92_24695 PF01584 CheW-like domain IX92_24700 PF01627 Hpt domain IX92_24700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_24700 PF02895 Signal transducing histidine kinase, homodimeric domain IX92_24700 PF09078 CheY binding IX92_24700 PF01584 CheW-like domain IX92_24705 PF00072 Response regulator receiver domain IX92_24715 PF00672 HAMP domain IX92_24715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_24720 PF05127 Helicase IX92_24720 PF13718 GNAT acetyltransferase 2 IX92_24725 PF08775 ParB family IX92_24725 PF02195 ParB-like nuclease domain IX92_24730 PF13614 AAA domain IX92_24730 PF18607 ParA helix turn helix domain IX92_25155 PF06406 StbA protein IX92_25360 PF12450 von Willebrand factor IX92_25360 PF12034 Domain of unknown function (DUF3520) IX92_25360 PF00092 von Willebrand factor type A domain IX92_25370 PF04545 Sigma-70, region 4 IX92_25370 PF04542 Sigma-70 region 2 IX92_25525 PF01323 DSBA-like thioredoxin domain IX92_25690 PF17762 HTH domain found in ParB protein IX92_25690 PF02195 ParB-like nuclease domain IX92_25715 PF00816 H-NS histone family IX92_25725 PF00563 EAL domain IX92_25725 PF13426 PAS domain IX92_25725 PF00990 Diguanylate cyclase, GGDEF domain IX92_25805 PF00580 UvrD/REP helicase N-terminal domain IX92_25805 PF13361 UvrD-like helicase C-terminal domain IX92_26160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_26160 PF00512 His Kinase A (phospho-acceptor) domain IX92_26160 PF00672 HAMP domain IX92_26165 PF00072 Response regulator receiver domain IX92_26165 PF00486 Transcriptional regulatory protein, C terminal IX92_26310 PF12792 CSS motif domain associated with EAL IX92_26310 PF00563 EAL domain IX92_26405 PF08206 Ribonuclease B OB domain IX92_26405 PF17876 Cold shock domain IX92_26405 PF00773 RNB domain IX92_26460 PF04993 TfoX N-terminal domain IX92_26460 PF04994 TfoX C-terminal domain IX92_26570 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system IX92_26650 PF11798 IMS family HHH motif IX92_26650 PF00817 impB/mucB/samB family IX92_26650 PF13438 Domain of unknown function (DUF4113) IX92_26650 PF11799 impB/mucB/samB family C-terminal domain IX92_26655 PF00717 Peptidase S24-like IX92_26670 PF01555 DNA methylase IX92_26715 PF00004 ATPase family associated with various cellular activities (AAA) IX92_26715 PF01434 Peptidase family M41 IX92_26715 PF17862 AAA+ lid domain IX92_26815 PF02687 FtsX-like permease family IX92_26815 PF12704 MacB-like periplasmic core domain IX92_26820 PF00005 ABC transporter IX92_26825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_26825 PF00672 HAMP domain IX92_26825 PF02743 Cache domain IX92_27030 PF00990 Diguanylate cyclase, GGDEF domain IX92_27030 PF00498 FHA domain IX92_27030 PF00563 EAL domain IX92_27135 PF00072 Response regulator receiver domain IX92_27145 PF13614 AAA domain IX92_27150 PF08775 ParB family IX92_27150 PF02195 ParB-like nuclease domain IX92_27155 PF07690 Major Facilitator Superfamily IX92_27170 PF01212 Beta-eliminating lyase IX92_27205 PF00072 Response regulator receiver domain IX92_27215 PF00512 His Kinase A (phospho-acceptor) domain IX92_27215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_27220 PF00563 EAL domain IX92_27220 PF00990 Diguanylate cyclase, GGDEF domain IX92_27220 PF03707 Bacterial signalling protein N terminal repeat IX92_27220 PF13188 PAS domain IX92_27225 PF02954 Bacterial regulatory protein, Fis family IX92_27225 PF00158 Sigma-54 interaction domain IX92_27225 PF00072 Response regulator receiver domain IX92_27235 PF00512 His Kinase A (phospho-acceptor) domain IX92_27235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_27235 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX92_27260 PF00072 Response regulator receiver domain IX92_27260 PF08448 PAS fold IX92_27260 PF00512 His Kinase A (phospho-acceptor) domain IX92_27260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_27260 PF13188 PAS domain IX92_27310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_27310 PF03466 LysR substrate binding domain IX92_27315 PF03466 LysR substrate binding domain IX92_27315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_27320 PF03306 Alpha-acetolactate decarboxylase IX92_27325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IX92_27325 PF00205 Thiamine pyrophosphate enzyme, central domain IX92_27325 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IX92_27330 PF00486 Transcriptional regulatory protein, C terminal IX92_27330 PF00072 Response regulator receiver domain IX92_27335 PF00512 His Kinase A (phospho-acceptor) domain IX92_27335 PF00672 HAMP domain IX92_27335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_27430 PF01569 PAP2 superfamily IX92_27445 PF00490 Delta-aminolevulinic acid dehydratase IX92_27450 PF00108 Thiolase, N-terminal domain IX92_27450 PF02803 Thiolase, C-terminal domain IX92_27475 PF01758 Sodium Bile acid symporter family IX92_27480 PF00107 Zinc-binding dehydrogenase IX92_27480 PF08240 Alcohol dehydrogenase GroES-like domain IX92_27490 PF13460 NAD(P)H-binding IX92_27490 PF11066 Protein of unknown function (DUF2867) IX92_27505 PF01381 Helix-turn-helix IX92_27510 PF05973 Phage derived protein Gp49-like (DUF891) IX92_27515 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin IX92_27520 PF03466 LysR substrate binding domain IX92_27520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_27525 PF00106 short chain dehydrogenase IX92_27530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_27530 PF03466 LysR substrate binding domain IX92_27565 PF01928 CYTH domain IX92_27640 PF00155 Aminotransferase class I and II IX92_27640 PF00392 Bacterial regulatory proteins, gntR family IX92_27650 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IX92_27650 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IX92_27655 PF01925 Sulfite exporter TauE/SafE IX92_27665 PF03466 LysR substrate binding domain IX92_27665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_27675 PF00593 TonB dependent receptor IX92_27675 PF07715 TonB-dependent Receptor Plug Domain IX92_27735 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IX92_27735 PF01872 RibD C-terminal domain IX92_27740 PF04073 Aminoacyl-tRNA editing domain IX92_27800 PF13087 AAA domain IX92_27800 PF13091 PLD-like domain IX92_27820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_27820 PF03466 LysR substrate binding domain IX92_27825 PF00664 ABC transporter transmembrane region IX92_27825 PF03412 Peptidase C39 family IX92_27825 PF00005 ABC transporter IX92_27835 PF03412 Peptidase C39 family IX92_27835 PF00664 ABC transporter transmembrane region IX92_27835 PF00005 ABC transporter IX92_27845 PF03466 LysR substrate binding domain IX92_27845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_27880 PF01810 LysE type translocator IX92_27885 PF12833 Helix-turn-helix domain IX92_27885 PF02311 AraC-like ligand binding domain IX92_27905 PF02798 Glutathione S-transferase, N-terminal domain IX92_27910 PF03466 LysR substrate binding domain IX92_27910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_27920 PF02806 Alpha amylase, C-terminal all-beta domain IX92_27920 PF00128 Alpha amylase, catalytic domain IX92_27935 PF12833 Helix-turn-helix domain IX92_27935 PF02311 AraC-like ligand binding domain IX92_27945 PF00005 ABC transporter IX92_27945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX92_27950 PF00005 ABC transporter IX92_27950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX92_27955 PF00528 Binding-protein-dependent transport system inner membrane component IX92_27955 PF12911 N-terminal TM domain of oligopeptide transport permease C IX92_27960 PF00528 Binding-protein-dependent transport system inner membrane component IX92_27965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX92_27975 PF00356 Bacterial regulatory proteins, lacI family IX92_27980 PF00722 Glycosyl hydrolases family 16 IX92_27985 PF02264 LamB porin IX92_27990 PF12833 Helix-turn-helix domain IX92_27995 PF00933 Glycosyl hydrolase family 3 N terminal domain IX92_28035 PF00561 alpha/beta hydrolase fold IX92_28065 PF01544 CorA-like Mg2+ transporter protein IX92_28070 PF00202 Aminotransferase class-III IX92_28085 PF00072 Response regulator receiver domain IX92_28085 PF00990 Diguanylate cyclase, GGDEF domain IX92_28110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_28110 PF00672 HAMP domain IX92_28110 PF02743 Cache domain IX92_28120 PF04002 RadC-like JAB domain IX92_28130 PF08751 TrwC relaxase IX92_28130 PF18272 single-stranded DNA binding TraI N-terminal subdomain IX92_28130 PF07057 DNA helicase TraI IX92_28130 PF18340 DNA relaxase TraI 2B/2B-like domain IX92_28150 PF06122 Conjugative relaxosome accessory transposon protein IX92_28160 PF06986 Type-1V conjugative transfer system mating pair stabilisation IX92_28170 PF06834 TraU protein IX92_28195 PF03743 Bacterial conjugation TrbI-like protein IX92_28225 PF00772 DnaB-like helicase N terminal domain IX92_28225 PF03796 DnaB-like helicase C terminal domain IX92_28315 PF05016 ParE toxin of type II toxin-antitoxin system, parDE IX92_28340 PF00356 Bacterial regulatory proteins, lacI family IX92_28345 PF16875 Glycosyl hydrolase family 36 N-terminal domain IX92_28345 PF16874 Glycosyl hydrolase family 36 C-terminal domain IX92_28350 PF00474 Sodium:solute symporter family IX92_28360 PF01810 LysE type translocator IX92_28445 PF01266 FAD dependent oxidoreductase IX92_28450 PF17200 Single Cache domain 2 IX92_28450 PF00672 HAMP domain IX92_28450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_28470 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IX92_28470 PF00925 GTP cyclohydrolase II IX92_28475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX92_28475 PF00672 HAMP domain IX92_28480 PF00563 EAL domain IX92_28480 PF08668 HDOD domain IX92_28495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX92_28500 PF01820 D-ala D-ala ligase N-terminus IX92_28500 PF07478 D-ala D-ala ligase C-terminus IX92_28505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX92_28505 PF00512 His Kinase A (phospho-acceptor) domain IX92_28520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX92_28520 PF03466 LysR substrate binding domain IX92_28550 PF01177 Asp/Glu/Hydantoin racemase IX92_28570 PF02028 BCCT, betaine/carnitine/choline family transporter