IX92_00005 SM01228 IX92_00005 IX92_00020 SM00470 ParB-like nuclease domain IX92_00060 SM00382 ATPases associated with a variety of cellular activities IX92_00080 SM00062 Bacterial periplasmic substrate-binding proteins IX92_00095 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. IX92_00095 SM00267 diguanylate cyclase IX92_00205 SM00876 Biotin and Thiamin Synthesis associated domain IX92_00230 SM00344 helix_turn_helix ASNC type IX92_00235 SM00052 Putative diguanylate phosphodiesterase IX92_00235 SM00091 PAS domain IX92_00235 SM00267 diguanylate cyclase IX92_00275 SM00999 Aerolysin toxin IX92_00285 SM00862 Transcriptional regulatory protein, C terminal IX92_00295 SM00342 helix_turn_helix, arabinose operon control protein IX92_00350 SM01004 Delta-aminolevulinic acid dehydratase IX92_00360 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs IX92_00360 SM00474 3'-5' exonuclease IX92_00360 SM00475 5'-3' exonuclease IX92_00360 SM00482 DNA polymerase A domain IX92_00390 SM00729 Elongator protein 3, MiaB family, Radical SAM IX92_00460 SM00382 ATPases associated with a variety of cellular activities IX92_00490 SM00448 cheY-homologous receiver domain IX92_00580 SM00342 helix_turn_helix, arabinose operon control protein IX92_00590 SM00341 Helicase and RNase D C-terminal IX92_00590 SM00487 DEAD-like helicases superfamily IX92_00590 SM00490 helicase superfamily c-terminal domain IX92_00590 SM00956 IX92_00590 IX92_00610 SM00487 DEAD-like helicases superfamily IX92_00610 SM00490 helicase superfamily c-terminal domain IX92_00620 SM00357 Cold shock protein domain IX92_00620 SM00382 ATPases associated with a variety of cellular activities IX92_00620 SM00959 Rho termination factor, N-terminal domain IX92_00715 SM01219 IX92_00715 IX92_00750 SM00052 Putative diguanylate phosphodiesterase IX92_00750 SM00267 diguanylate cyclase IX92_00750 SM00897 FIST N domain IX92_00750 SM01204 IX92_00750 IX92_00755 SM01144 IX92_00755 IX92_00785 SM00052 Putative diguanylate phosphodiesterase IX92_00790 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor IX92_00795 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IX92_00800 SM00404 Protein tyrosine phosphatase, catalytic domain motif IX92_00855 SM00382 ATPases associated with a variety of cellular activities IX92_00855 SM00962 SRP54-type protein, GTPase domain IX92_00855 SM00963 SRP54-type protein, helical bundle domain IX92_00860 SM00382 ATPases associated with a variety of cellular activities IX92_00875 SM00450 Rhodanese Homology Domain IX92_00900 SM00563 Phosphate acyltransferases IX92_00960 SM00360 RNA recognition motif IX92_01020 SM01018 B12 binding domain IX92_01025 SM00924 MgtE intracellular N domain IX92_01055 SM00382 ATPases associated with a variety of cellular activities IX92_01075 SM00116 Domain in cystathionine beta-synthase and other proteins. IX92_01085 SM00382 ATPases associated with a variety of cellular activities IX92_01120 SM00563 Phosphate acyltransferases IX92_01195 SM00670 Large family of predicted nucleotide-binding domains IX92_01200 SM00487 DEAD-like helicases superfamily IX92_01200 SM00490 helicase superfamily c-terminal domain IX92_01260 SM00533 DNA-binding domain of DNA mismatch repair MUTS family IX92_01260 SM00534 ATPase domain of DNA mismatch repair MUTS family IX92_01270 SM00382 ATPases associated with a variety of cellular activities IX92_01280 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain IX92_01350 SM00829 Enoylreductase IX92_01450 SM00052 Putative diguanylate phosphodiesterase IX92_01450 SM00267 diguanylate cyclase IX92_01450 SM00448 cheY-homologous receiver domain IX92_01455 SM00448 cheY-homologous receiver domain IX92_01460 SM00387 Histidine kinase-like ATPases IX92_01460 SM00388 His Kinase A (phosphoacceptor) domain IX92_01460 SM01079 IX92_01460 IX92_01535 SM00487 DEAD-like helicases superfamily IX92_01560 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. IX92_01620 SM01329 IX92_01620 IX92_01625 SM00917 LeuA allosteric (dimerisation) domain IX92_01630 SM00014 Acid phosphatase homologues IX92_01635 SM00014 Acid phosphatase homologues IX92_01760 SM00838 Elongation factor G C-terminus IX92_01770 SM00358 Double-stranded RNA binding motif IX92_01770 SM00535 Ribonuclease III family IX92_01795 SM00073 Histidine Phosphotransfer domain IX92_01795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_01795 SM00387 Histidine kinase-like ATPases IX92_01795 SM00388 His Kinase A (phosphoacceptor) domain IX92_01795 SM00448 cheY-homologous receiver domain IX92_01805 SM00954 Region found in RelA / SpoT proteins IX92_01820 SM01192 IX92_01820 IX92_01820 SM01193 IX92_01820 IX92_01840 SM00382 ATPases associated with a variety of cellular activities IX92_01850 SM00287 Bacterial SH3 domain homologues IX92_01865 SM00880 IX92_01865 IX92_01865 SM01118 IX92_01865 IX92_01875 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_01875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_01890 SM00448 cheY-homologous receiver domain IX92_01890 SM00862 Transcriptional regulatory protein, C terminal IX92_01945 SM01387 IX92_01945 IX92_01950 SM00316 Ribosomal protein S1-like RNA-binding domain IX92_01950 SM00322 K homology RNA-binding domain IX92_01955 SM00028 Tetratricopeptide repeats IX92_01960 SM00347 helix_turn_helix multiple antibiotic resistance protein IX92_01970 SM00382 ATPases associated with a variety of cellular activities IX92_01990 SM00927 DNA mismatch repair enzyme MutH IX92_02000 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. IX92_02035 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor IX92_02050 SM00904 Riboflavin kinase IX92_02115 SM00448 cheY-homologous receiver domain IX92_02115 SM00850 LytTr DNA-binding domain IX92_02130 SM00830 Chorismate mutase type II IX92_02145 SM00382 ATPases associated with a variety of cellular activities IX92_02165 SM00052 Putative diguanylate phosphodiesterase IX92_02165 SM00267 diguanylate cyclase IX92_02175 SM00830 Chorismate mutase type II IX92_02185 SM00062 Bacterial periplasmic substrate-binding proteins IX92_02195 SM00363 S4 RNA-binding domain IX92_02205 SM00382 ATPases associated with a variety of cellular activities IX92_02205 SM01086 C-terminal, D2-small domain, of ClpB protein IX92_02275 SM00271 DnaJ molecular chaperone homology domain IX92_02300 SM00562 IX92_02300 IX92_02305 SM00838 Elongation factor G C-terminus IX92_02305 SM00889 Elongation factor G, domain IV IX92_02330 SM00342 helix_turn_helix, arabinose operon control protein IX92_02345 SM00382 ATPases associated with a variety of cellular activities IX92_02350 SM00858 IX92_02350 IX92_02385 SM00028 Tetratricopeptide repeats IX92_02405 SM00342 helix_turn_helix, arabinose operon control protein IX92_02455 SM01038 Beta galactosidase small chain IX92_02460 SM00354 helix_turn _helix lactose operon repressor IX92_02485 SM00354 helix_turn _helix lactose operon repressor IX92_02505 SM00342 helix_turn_helix, arabinose operon control protein IX92_02550 SM00116 Domain in cystathionine beta-synthase and other proteins. IX92_02565 SM01323 IX92_02565 IX92_02610 SM00448 cheY-homologous receiver domain IX92_02610 SM00862 Transcriptional regulatory protein, C terminal IX92_02615 SM00091 PAS domain IX92_02615 SM00387 Histidine kinase-like ATPases IX92_02615 SM00388 His Kinase A (phosphoacceptor) domain IX92_02645 SM00382 ATPases associated with a variety of cellular activities IX92_02725 SM00925 MltA specific insert domain IX92_02745 SM00530 Helix-turn-helix XRE-family like proteins IX92_02765 SM00564 beta-propeller repeat IX92_02770 SM00382 ATPases associated with a variety of cellular activities IX92_02780 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. IX92_02780 SM00267 diguanylate cyclase IX92_02795 SM00116 Domain in cystathionine beta-synthase and other proteins. IX92_02795 SM01240 IX92_02795 IX92_02805 SM00495 Chitin-binding domain type 3 IX92_02845 SM00260 Two component signalling adaptor domain IX92_02845 SM00448 cheY-homologous receiver domain IX92_02850 SM00563 Phosphate acyltransferases IX92_02880 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) IX92_02880 SM00091 PAS domain IX92_02880 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_02915 SM00487 DEAD-like helicases superfamily IX92_02915 SM00490 helicase superfamily c-terminal domain IX92_02940 SM00530 Helix-turn-helix XRE-family like proteins IX92_03000 SM00271 DnaJ molecular chaperone homology domain IX92_03040 SM00062 Bacterial periplasmic substrate-binding proteins IX92_03045 SM01211 IX92_03045 IX92_03085 SM00363 S4 RNA-binding domain IX92_03090 SM00463 Small MutS-related domain IX92_03110 SM01081 Putative carbohydrate binding domain IX92_03220 SM00861 Transketolase, pyrimidine binding domain IX92_03235 SM00881 CoA binding domain IX92_03270 SM00861 Transketolase, pyrimidine binding domain IX92_03295 SM00981 IX92_03295 IX92_03320 SM00477 DNA/RNA non-specific endonuclease IX92_03320 SM00892 DNA/RNA non-specific endonuclease IX92_03325 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs IX92_03325 SM00475 5'-3' exonuclease IX92_03335 SM00267 diguanylate cyclase IX92_03340 SM00028 Tetratricopeptide repeats IX92_03390 SM00028 Tetratricopeptide repeats IX92_03480 SM00382 ATPases associated with a variety of cellular activities IX92_03485 SM00091 PAS domain IX92_03485 SM00387 Histidine kinase-like ATPases IX92_03485 SM00388 His Kinase A (phosphoacceptor) domain IX92_03490 SM00382 ATPases associated with a variety of cellular activities IX92_03490 SM00448 cheY-homologous receiver domain IX92_03515 SM00382 ATPases associated with a variety of cellular activities IX92_03570 SM00463 Small MutS-related domain IX92_03625 SM00825 Beta-ketoacyl synthase IX92_03635 SM00859 Semialdehyde dehydrogenase, NAD binding domain IX92_03680 SM00382 ATPases associated with a variety of cellular activities IX92_03690 SM00342 helix_turn_helix, arabinose operon control protein IX92_03695 SM00899 IX92_03695 IX92_03715 SM00836 DALR anticodon binding domain IX92_03715 SM01016 Arginyl tRNA synthetase N terminal dom IX92_03730 SM00855 Phosphoglycerate mutase family IX92_03740 SM00382 ATPases associated with a variety of cellular activities IX92_03740 SM00962 SRP54-type protein, GTPase domain IX92_03755 SM00448 cheY-homologous receiver domain IX92_03765 SM00073 Histidine Phosphotransfer domain IX92_03765 SM00260 Two component signalling adaptor domain IX92_03765 SM00387 Histidine kinase-like ATPases IX92_03765 SM01231 IX92_03765 IX92_03770 SM00448 cheY-homologous receiver domain IX92_03780 SM00260 Two component signalling adaptor domain IX92_03785 SM00260 Two component signalling adaptor domain IX92_03795 SM00382 ATPases associated with a variety of cellular activities IX92_03885 SM00448 cheY-homologous receiver domain IX92_03905 SM00382 ATPases associated with a variety of cellular activities IX92_03915 SM00493 IX92_03915 IX92_03940 SM00448 cheY-homologous receiver domain IX92_03940 SM00862 Transcriptional regulatory protein, C terminal IX92_03945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_03945 SM00387 Histidine kinase-like ATPases IX92_03965 SM00382 ATPases associated with a variety of cellular activities IX92_03990 SM00382 ATPases associated with a variety of cellular activities IX92_03990 SM00448 cheY-homologous receiver domain IX92_03995 SM00387 Histidine kinase-like ATPases IX92_03995 SM00388 His Kinase A (phosphoacceptor) domain IX92_04010 SM00382 ATPases associated with a variety of cellular activities IX92_04010 SM00994 ClpX C4-type zinc finger IX92_04010 SM01086 C-terminal, D2-small domain, of ClpB protein IX92_04015 SM00382 ATPases associated with a variety of cellular activities IX92_04015 SM00464 Found in ATP-dependent protease La (LON) IX92_04020 SM00411 bacterial (prokaryotic) histone like domain IX92_04040 SM00316 Ribosomal protein S1-like RNA-binding domain IX92_04045 SM00411 bacterial (prokaryotic) histone like domain IX92_04055 SM00028 Tetratricopeptide repeats IX92_04060 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family IX92_04100 SM00382 ATPases associated with a variety of cellular activities IX92_04105 SM00267 diguanylate cyclase IX92_04130 SM00382 ATPases associated with a variety of cellular activities IX92_04145 SM00870 IX92_04145 IX92_04170 SM00487 DEAD-like helicases superfamily IX92_04170 SM00491 IX92_04170 IX92_04200 SM00474 3'-5' exonuclease IX92_04210 SM00316 Ribosomal protein S1-like RNA-binding domain IX92_04215 SM00363 S4 RNA-binding domain IX92_04245 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. IX92_04250 SM00822 IX92_04250 IX92_04260 SM00825 Beta-ketoacyl synthase IX92_04330 SM00260 Two component signalling adaptor domain IX92_04330 SM00448 cheY-homologous receiver domain IX92_04335 SM00481 DNA polymerase alpha chain like domain IX92_04360 SM00487 DEAD-like helicases superfamily IX92_04360 SM00490 helicase superfamily c-terminal domain IX92_04370 SM01144 IX92_04370 IX92_04380 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. IX92_04390 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins IX92_04390 SM00495 Chitin-binding domain type 3 IX92_04390 SM00636 IX92_04390 IX92_04395 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. IX92_04425 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain IX92_04440 SM00563 Phosphate acyltransferases IX92_04450 SM00978 IX92_04450 IX92_04465 SM00344 helix_turn_helix ASNC type IX92_04500 SM00062 Bacterial periplasmic substrate-binding proteins IX92_04500 SM00267 diguanylate cyclase IX92_04520 SM00346 helix_turn_helix isocitrate lyase regulation IX92_04585 SM01049 IX92_04585 IX92_04590 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins IX92_04635 SM00458 Ricin-type beta-trefoil IX92_04670 SM00382 ATPases associated with a variety of cellular activities IX92_04690 SM00244 prohibitin homologues IX92_04695 SM00495 Chitin-binding domain type 3 IX92_04700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_04700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_04715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_04715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_04730 SM00028 Tetratricopeptide repeats IX92_04730 SM00267 diguanylate cyclase IX92_04760 SM00382 ATPases associated with a variety of cellular activities IX92_04765 SM00382 ATPases associated with a variety of cellular activities IX92_04775 SM00267 diguanylate cyclase IX92_04795 SM01002 Alanine dehydrogenase/PNT, C-terminal domain IX92_04795 SM01003 Alanine dehydrogenase/PNT, N-terminal domain IX92_04800 SM00344 helix_turn_helix ASNC type IX92_04805 SM00843 IX92_04805 IX92_04820 SM00345 helix_turn_helix gluconate operon transcriptional repressor IX92_04830 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_04830 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_04885 SM00487 DEAD-like helicases superfamily IX92_04885 SM00490 helicase superfamily c-terminal domain IX92_04885 SM00982 IX92_04885 IX92_04885 SM01058 CarD-like/TRCF domain IX92_04900 SM00382 ATPases associated with a variety of cellular activities IX92_04915 SM00849 Metallo-beta-lactamase superfamily IX92_04920 SM00382 ATPases associated with a variety of cellular activities IX92_04950 SM00763 PrkA AAA domain IX92_04975 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_04995 SM00382 ATPases associated with a variety of cellular activities IX92_05000 SM00062 Bacterial periplasmic substrate-binding proteins IX92_05000 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. IX92_05065 SM00448 cheY-homologous receiver domain IX92_05070 SM00387 Histidine kinase-like ATPases IX92_05085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_05085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_05090 SM00729 Elongator protein 3, MiaB family, Radical SAM IX92_05095 SM00052 Putative diguanylate phosphodiesterase IX92_05095 SM00091 PAS domain IX92_05125 SM00347 helix_turn_helix multiple antibiotic resistance protein IX92_05170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_05185 SM00342 helix_turn_helix, arabinose operon control protein IX92_05210 SM00342 helix_turn_helix, arabinose operon control protein IX92_05260 SM00479 IX92_05260 IX92_05290 SM00382 ATPases associated with a variety of cellular activities IX92_05290 SM00487 DEAD-like helicases superfamily IX92_05290 SM00490 helicase superfamily c-terminal domain IX92_05290 SM00847 Helicase associated domain (HA2) Add an annotation IX92_05340 SM00481 DNA polymerase alpha chain like domain IX92_05355 SM00052 Putative diguanylate phosphodiesterase IX92_05355 SM00267 diguanylate cyclase IX92_05355 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_05360 SM00363 S4 RNA-binding domain IX92_05380 SM00382 ATPases associated with a variety of cellular activities IX92_05385 SM00382 ATPases associated with a variety of cellular activities IX92_05440 SM00919 Malic enzyme, NAD binding domain IX92_05440 SM01274 IX92_05440 IX92_05445 SM00487 DEAD-like helicases superfamily IX92_05445 SM00490 helicase superfamily c-terminal domain IX92_05465 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. IX92_05475 SM00345 helix_turn_helix gluconate operon transcriptional repressor IX92_05490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_05490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_05505 SM00052 Putative diguanylate phosphodiesterase IX92_05530 SM00387 Histidine kinase-like ATPases IX92_05530 SM00388 His Kinase A (phosphoacceptor) domain IX92_05530 SM00448 cheY-homologous receiver domain IX92_05560 SM00091 PAS domain IX92_05560 SM00382 ATPases associated with a variety of cellular activities IX92_05580 SM01034 Sensors of blue-light using FAD IX92_05585 SM00267 diguanylate cyclase IX92_05630 SM00849 Metallo-beta-lactamase superfamily IX92_05660 SM00387 Histidine kinase-like ATPases IX92_05660 SM01049 IX92_05660 IX92_05665 SM00421 helix_turn_helix, Lux Regulon IX92_05665 SM00448 cheY-homologous receiver domain IX92_05675 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_05675 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_05815 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. IX92_06145 SM00671 Sel1-like repeats. IX92_06200 SM00345 helix_turn_helix gluconate operon transcriptional repressor IX92_06200 SM00866 IX92_06200 IX92_06215 SM01022 IX92_06215 IX92_06235 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. IX92_06255 SM00479 IX92_06255 IX92_06300 SM00903 Flavin reductase like domain IX92_06320 SM00855 Phosphoglycerate mutase family IX92_06340 SM00382 ATPases associated with a variety of cellular activities IX92_06355 SM00267 diguanylate cyclase IX92_06375 SM00382 ATPases associated with a variety of cellular activities IX92_06395 SM00857 Resolvase, N terminal domain IX92_06470 SM00028 Tetratricopeptide repeats IX92_06495 SM00052 Putative diguanylate phosphodiesterase IX92_06535 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. IX92_06590 SM00382 ATPases associated with a variety of cellular activities IX92_06590 SM01086 C-terminal, D2-small domain, of ClpB protein IX92_06655 SM00345 helix_turn_helix gluconate operon transcriptional repressor IX92_06655 SM00895 IX92_06655 IX92_06725 SM00327 von Willebrand factor (vWF) type A domain IX92_06730 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase IX92_06735 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_06755 SM00382 ATPases associated with a variety of cellular activities IX92_06770 SM00062 Bacterial periplasmic substrate-binding proteins IX92_06805 SM00316 Ribosomal protein S1-like RNA-binding domain IX92_06825 SM00382 ATPases associated with a variety of cellular activities IX92_06835 SM00945 ProQ/FINO family IX92_06840 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. IX92_06840 SM00245 tail specific protease IX92_06875 SM00981 IX92_06875 IX92_06885 SM00382 ATPases associated with a variety of cellular activities IX92_06965 SM00422 helix_turn_helix, mercury resistance IX92_07085 SM01005 Alanine racemase, C-terminal domain IX92_07090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_07090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_07115 SM00458 Ricin-type beta-trefoil IX92_07150 SM00382 ATPases associated with a variety of cellular activities IX92_07210 SM00342 helix_turn_helix, arabinose operon control protein IX92_07240 SM00849 Metallo-beta-lactamase superfamily IX92_07320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_07320 SM00387 Histidine kinase-like ATPases IX92_07320 SM00388 His Kinase A (phosphoacceptor) domain IX92_07320 SM00448 cheY-homologous receiver domain IX92_07330 SM00421 helix_turn_helix, Lux Regulon IX92_07330 SM00448 cheY-homologous receiver domain IX92_07405 SM00100 Cyclic nucleotide-monophosphate binding domain IX92_07405 SM00419 helix_turn_helix, cAMP Regulatory protein IX92_07435 SM00382 ATPases associated with a variety of cellular activities IX92_07460 SM00267 diguanylate cyclase IX92_07490 SM00926 Molybdopterin oxidoreductase Fe4S4 domain IX92_07525 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_07525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_07550 SM00867 YceI-like domain IX92_07565 SM00849 Metallo-beta-lactamase superfamily IX92_07640 SM00382 ATPases associated with a variety of cellular activities IX92_07665 SM00387 Histidine kinase-like ATPases IX92_07665 SM00388 His Kinase A (phosphoacceptor) domain IX92_07670 SM00382 ATPases associated with a variety of cellular activities IX92_07670 SM00448 cheY-homologous receiver domain IX92_07685 SM00382 ATPases associated with a variety of cellular activities IX92_07695 SM00852 Probable molybdopterin binding domain IX92_07715 SM00327 von Willebrand factor (vWF) type A domain IX92_07730 SM01144 IX92_07730 IX92_07740 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_07810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_07810 SM00387 Histidine kinase-like ATPases IX92_07810 SM00388 His Kinase A (phosphoacceptor) domain IX92_07810 SM00448 cheY-homologous receiver domain IX92_07815 SM00382 ATPases associated with a variety of cellular activities IX92_07815 SM00448 cheY-homologous receiver domain IX92_07900 SM01006 Siderophore biosynthesis protein domain IX92_07910 SM00823 Phosphopantetheine attachment site IX92_07910 SM00824 Thioesterase IX92_07915 SM00823 Phosphopantetheine attachment site IX92_07915 SM01294 IX92_07915 IX92_07920 SM00923 MbtH-like protein IX92_07925 SM00382 ATPases associated with a variety of cellular activities IX92_07940 SM00382 ATPases associated with a variety of cellular activities IX92_07985 SM00345 helix_turn_helix gluconate operon transcriptional repressor IX92_07985 SM00895 IX92_07985 IX92_08000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_08000 SM00387 Histidine kinase-like ATPases IX92_08000 SM00388 His Kinase A (phosphoacceptor) domain IX92_08005 SM00448 cheY-homologous receiver domain IX92_08005 SM00862 Transcriptional regulatory protein, C terminal IX92_08070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_08075 SM00267 diguanylate cyclase IX92_08090 SM00062 Bacterial periplasmic substrate-binding proteins IX92_08095 SM00448 cheY-homologous receiver domain IX92_08100 SM00091 PAS domain IX92_08100 SM00387 Histidine kinase-like ATPases IX92_08145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_08145 SM00387 Histidine kinase-like ATPases IX92_08145 SM00388 His Kinase A (phosphoacceptor) domain IX92_08150 SM00448 cheY-homologous receiver domain IX92_08150 SM00862 Transcriptional regulatory protein, C terminal IX92_08155 SM00849 Metallo-beta-lactamase superfamily IX92_08180 SM00342 helix_turn_helix, arabinose operon control protein IX92_08205 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_08205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_08210 SM00434 DNA Topoisomerase IV IX92_08240 SM00852 Probable molybdopterin binding domain IX92_08300 SM00382 ATPases associated with a variety of cellular activities IX92_08325 SM00363 S4 RNA-binding domain IX92_08330 SM00487 DEAD-like helicases superfamily IX92_08330 SM00490 helicase superfamily c-terminal domain IX92_08340 SM00448 cheY-homologous receiver domain IX92_08340 SM00862 Transcriptional regulatory protein, C terminal IX92_08345 SM00387 Histidine kinase-like ATPases IX92_08365 SM00862 Transcriptional regulatory protein, C terminal IX92_08385 SM00862 Transcriptional regulatory protein, C terminal IX92_08405 SM00345 helix_turn_helix gluconate operon transcriptional repressor IX92_08405 SM00866 IX92_08405 IX92_08415 SM00640 Glycosyl hydrolases family 32 IX92_08465 SM00887 Ethylbenzene dehydrogenase IX92_08630 SM00052 Putative diguanylate phosphodiesterase IX92_08630 SM00267 diguanylate cyclase IX92_08780 SM00354 helix_turn _helix lactose operon repressor IX92_08815 SM00354 helix_turn _helix lactose operon repressor IX92_08825 SM00388 His Kinase A (phosphoacceptor) domain IX92_08830 SM00448 cheY-homologous receiver domain IX92_08830 SM00862 Transcriptional regulatory protein, C terminal IX92_08855 SM00387 Histidine kinase-like ATPases IX92_08855 SM00388 His Kinase A (phosphoacceptor) domain IX92_08855 SM00448 cheY-homologous receiver domain IX92_08860 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) IX92_08860 SM00091 PAS domain IX92_08860 SM00448 cheY-homologous receiver domain IX92_08865 SM00382 ATPases associated with a variety of cellular activities IX92_08870 SM00448 cheY-homologous receiver domain IX92_08980 SM00882 Coenzyme A transferase IX92_08985 SM00882 Coenzyme A transferase IX92_09035 SM00382 ATPases associated with a variety of cellular activities IX92_09075 SM00354 helix_turn _helix lactose operon repressor IX92_09085 SM00052 Putative diguanylate phosphodiesterase IX92_09095 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_09095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_09105 SM00640 Glycosyl hydrolases family 32 IX92_09115 SM00354 helix_turn _helix lactose operon repressor IX92_09175 SM00873 B3/4 domain IX92_09175 SM00874 tRNA synthetase B5 domain IX92_09175 SM00896 Ferredoxin-fold anticodon binding domain IX92_09185 SM00267 diguanylate cyclase IX92_09250 SM00278 Helix-hairpin-helix DNA-binding motif class 1 IX92_09250 SM00465 GIY-YIG type nucleases (URI domain) IX92_09255 SM00421 helix_turn_helix, Lux Regulon IX92_09255 SM00448 cheY-homologous receiver domain IX92_09270 SM00486 DNA polymerase type-B family IX92_09275 SM00458 Ricin-type beta-trefoil IX92_09285 SM00841 Elongation factor P, C-terminal IX92_09285 SM01185 IX92_09285 IX92_09295 SM00411 bacterial (prokaryotic) histone like domain IX92_09305 SM00387 Histidine kinase-like ATPases IX92_09305 SM00448 cheY-homologous receiver domain IX92_09310 SM00387 Histidine kinase-like ATPases IX92_09310 SM00448 cheY-homologous receiver domain IX92_09365 SM00382 ATPases associated with a variety of cellular activities IX92_09390 SM00155 Phospholipase D. Active site motifs. IX92_09445 SM00382 ATPases associated with a variety of cellular activities IX92_09465 SM00382 ATPases associated with a variety of cellular activities IX92_09470 SM00382 ATPases associated with a variety of cellular activities IX92_09485 SM01131 IX92_09485 IX92_09545 SM00528 Domain in histone-like proteins of HNS family IX92_09635 SM00729 Elongator protein 3, MiaB family, Radical SAM IX92_09635 SM00876 Biotin and Thiamin Synthesis associated domain IX92_09655 SM00491 IX92_09655 IX92_09675 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. IX92_09680 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_09680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_09725 SM00448 cheY-homologous receiver domain IX92_09725 SM00862 Transcriptional regulatory protein, C terminal IX92_09730 SM00387 Histidine kinase-like ATPases IX92_09730 SM00388 His Kinase A (phosphoacceptor) domain IX92_09790 SM00387 Histidine kinase-like ATPases IX92_09790 SM00388 His Kinase A (phosphoacceptor) domain IX92_09790 SM00448 cheY-homologous receiver domain IX92_09820 SM00028 Tetratricopeptide repeats IX92_09875 SM00382 ATPases associated with a variety of cellular activities IX92_09880 SM00278 Helix-hairpin-helix DNA-binding motif class 1 IX92_09885 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_09910 SM00822 IX92_09910 IX92_09970 SM00382 ATPases associated with a variety of cellular activities IX92_09970 SM01086 C-terminal, D2-small domain, of ClpB protein IX92_09980 SM00357 Cold shock protein domain IX92_10040 SM00342 helix_turn_helix, arabinose operon control protein IX92_10070 SM00448 cheY-homologous receiver domain IX92_10070 SM00862 Transcriptional regulatory protein, C terminal IX92_10080 SM00354 helix_turn _helix lactose operon repressor IX92_10115 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain IX92_10115 SM00437 Bacterial DNA topoisomerase I DNA-binding domain IX92_10115 SM00493 IX92_10115 IX92_10145 SM00316 Ribosomal protein S1-like RNA-binding domain IX92_10155 SM00840 IX92_10155 IX92_10170 SM00052 Putative diguanylate phosphodiesterase IX92_10195 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IX92_10205 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_10205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_10225 SM00098 Alkaline phosphatase homologues IX92_10310 SM00859 Semialdehyde dehydrogenase, NAD binding domain IX92_10330 SM00073 Histidine Phosphotransfer domain IX92_10355 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_10355 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_10365 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_10370 SM00052 Putative diguanylate phosphodiesterase IX92_10380 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) IX92_10380 SM00091 PAS domain IX92_10380 SM00387 Histidine kinase-like ATPases IX92_10385 SM00382 ATPases associated with a variety of cellular activities IX92_10385 SM00448 cheY-homologous receiver domain IX92_10425 SM00342 helix_turn_helix, arabinose operon control protein IX92_10430 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain IX92_10430 SM00437 Bacterial DNA topoisomerase I DNA-binding domain IX92_10430 SM00493 IX92_10430 IX92_10455 SM00226 Low molecular weight phosphatase family IX92_10465 SM00905 Dihydroneopterin aldolase IX92_10515 SM00862 Transcriptional regulatory protein, C terminal IX92_10545 SM00116 Domain in cystathionine beta-synthase and other proteins. IX92_10555 SM00267 diguanylate cyclase IX92_10575 SM00852 Probable molybdopterin binding domain IX92_10580 SM00729 Elongator protein 3, MiaB family, Radical SAM IX92_10595 SM00382 ATPases associated with a variety of cellular activities IX92_10595 SM00448 cheY-homologous receiver domain IX92_10600 SM00487 DEAD-like helicases superfamily IX92_10600 SM00490 helicase superfamily c-terminal domain IX92_10630 SM00382 ATPases associated with a variety of cellular activities IX92_10655 SM00382 ATPases associated with a variety of cellular activities IX92_10815 SM00858 IX92_10815 IX92_10855 SM00900 IX92_10855 IX92_10865 SM00478 endonuclease III IX92_10865 SM00525 IX92_10865 IX92_10895 SM00382 ATPases associated with a variety of cellular activities IX92_10910 SM00342 helix_turn_helix, arabinose operon control protein IX92_10980 SM00479 IX92_10980 IX92_10995 SM01130 IX92_10995 IX92_11010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_11010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_11085 SM00937 IX92_11085 IX92_11105 SM01400 IX92_11105 IX92_11245 SM00047 Lysozyme subfamily 2 IX92_11290 SM00138 Methyltransferase, chemotaxis proteins IX92_11295 SM00260 Two component signalling adaptor domain IX92_11295 SM00448 cheY-homologous receiver domain IX92_11300 SM00858 IX92_11300 IX92_11335 SM00530 Helix-turn-helix XRE-family like proteins IX92_11410 SM00862 Transcriptional regulatory protein, C terminal IX92_11425 SM00387 Histidine kinase-like ATPases IX92_11430 SM00862 Transcriptional regulatory protein, C terminal IX92_11455 SM00116 Domain in cystathionine beta-synthase and other proteins. IX92_11460 SM00938 Nitrogen regulatory protein P-II IX92_11490 SM00244 prohibitin homologues IX92_11510 SM00278 Helix-hairpin-helix DNA-binding motif class 1 IX92_11510 SM00292 breast cancer carboxy-terminal domain IX92_11510 SM00532 Ligase N family IX92_11515 SM00771 ZipA, C-terminal domain (FtsZ-binding) IX92_11550 SM00729 Elongator protein 3, MiaB family, Radical SAM IX92_11565 SM00116 Domain in cystathionine beta-synthase and other proteins. IX92_11565 SM01091 Transporter associated domain IX92_11620 SM00936 Penicillin-binding protein 5, C-terminal domain IX92_11635 SM00729 Elongator protein 3, MiaB family, Radical SAM IX92_11690 SM00642 Alpha-amylase domain IX92_11700 SM00354 helix_turn _helix lactose operon repressor IX92_11715 SM00382 ATPases associated with a variety of cellular activities IX92_11715 SM00930 IX92_11715 IX92_11775 SM00479 IX92_11775 IX92_11790 SM00849 Metallo-beta-lactamase superfamily IX92_11795 SM00257 Lysin motif IX92_11810 SM00938 Nitrogen regulatory protein P-II IX92_11820 SM00977 TilS substrate C-terminal domain IX92_11830 SM00481 DNA polymerase alpha chain like domain IX92_11860 SM00935 Outer membrane protein (OmpH-like) IX92_11870 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. IX92_11915 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. IX92_11970 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase IX92_12020 SM00495 Chitin-binding domain type 3 IX92_12020 SM00636 IX92_12020 IX92_12035 SM00487 DEAD-like helicases superfamily IX92_12035 SM00490 helicase superfamily c-terminal domain IX92_12045 SM00267 diguanylate cyclase IX92_12045 SM00448 cheY-homologous receiver domain IX92_12075 SM00900 IX92_12075 IX92_12125 SM00464 Found in ATP-dependent protease La (LON) IX92_12150 SM00382 ATPases associated with a variety of cellular activities IX92_12180 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain IX92_12185 SM01133 IX92_12185 IX92_12225 SM00986 Uracil DNA glycosylase superfamily IX92_12225 SM00987 UreE urease accessory protein, C-terminal domain IX92_12230 SM00518 AP endonuclease family 2 IX92_12250 SM00851 MGS-like domain IX92_12250 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IX92_12255 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain IX92_12270 SM00957 SecA DEAD-like domain IX92_12270 SM00958 SecA preprotein cross-linking domain IX92_12280 SM00864 Tubulin/FtsZ family, GTPase domain IX92_12280 SM00865 Tubulin/FtsZ family, C-terminal domain IX92_12285 SM00842 Cell division protein FtsA IX92_12365 SM00749 bacterial OsmY and nodulation domain IX92_12415 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. IX92_12420 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. IX92_12425 SM00434 DNA Topoisomerase IV IX92_12430 SM00387 Histidine kinase-like ATPases IX92_12430 SM00433 TopoisomeraseII IX92_12465 SM00073 Histidine Phosphotransfer domain IX92_12465 SM00091 PAS domain IX92_12465 SM00387 Histidine kinase-like ATPases IX92_12465 SM00388 His Kinase A (phosphoacceptor) domain IX92_12465 SM00448 cheY-homologous receiver domain IX92_12470 SM00091 PAS domain IX92_12470 SM00267 diguanylate cyclase IX92_12475 SM00729 Elongator protein 3, MiaB family, Radical SAM IX92_12520 SM00316 Ribosomal protein S1-like RNA-binding domain IX92_12555 SM00052 Putative diguanylate phosphodiesterase IX92_12555 SM00091 PAS domain IX92_12555 SM00267 diguanylate cyclase IX92_12575 SM00937 IX92_12575 IX92_12590 SM00487 DEAD-like helicases superfamily IX92_12590 SM00490 helicase superfamily c-terminal domain IX92_12600 SM00052 Putative diguanylate phosphodiesterase IX92_12600 SM00267 diguanylate cyclase IX92_12625 SM00382 ATPases associated with a variety of cellular activities IX92_12635 SM01103 IX92_12635 IX92_12660 SM00363 S4 RNA-binding domain IX92_12700 SM00091 PAS domain IX92_12700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_12700 SM00387 Histidine kinase-like ATPases IX92_12700 SM00388 His Kinase A (phosphoacceptor) domain IX92_12700 SM00448 cheY-homologous receiver domain IX92_12720 SM00382 ATPases associated with a variety of cellular activities IX92_12725 SM00382 ATPases associated with a variety of cellular activities IX92_12745 SM01068 Putative carbohydrate binding domain IX92_12755 SM00382 ATPases associated with a variety of cellular activities IX92_12775 SM00938 Nitrogen regulatory protein P-II IX92_12800 SM00487 DEAD-like helicases superfamily IX92_12800 SM00490 helicase superfamily c-terminal domain IX92_12800 SM00847 Helicase associated domain (HA2) Add an annotation IX92_12845 SM00382 ATPases associated with a variety of cellular activities IX92_12855 SM00947 Carbonic anhydrase IX92_12885 SM00345 helix_turn_helix gluconate operon transcriptional repressor IX92_12885 SM00895 IX92_12885 IX92_12915 SM00644 IX92_12915 IX92_12980 SM00382 ATPases associated with a variety of cellular activities IX92_12980 SM00962 SRP54-type protein, GTPase domain IX92_12980 SM00963 SRP54-type protein, helical bundle domain IX92_12990 SM01091 Transporter associated domain IX92_13000 SM00257 Lysin motif IX92_13045 SM00905 Dihydroneopterin aldolase IX92_13050 SM01207 IX92_13050 IX92_13075 SM00400 zinc finger IX92_13075 SM00493 IX92_13075 IX92_13075 SM00766 DNA primase DnaG DnaB-binding IX92_13090 SM00271 DnaJ molecular chaperone homology domain IX92_13110 SM00650 Ribosomal RNA adenine dimethylases IX92_13160 SM00563 Phosphate acyltransferases IX92_13195 SM00420 helix_turn_helix, Deoxyribose operon repressor IX92_13195 SM01134 IX92_13195 IX92_13205 SM00345 helix_turn_helix gluconate operon transcriptional repressor IX92_13205 SM00895 IX92_13205 IX92_13210 SM00267 diguanylate cyclase IX92_13250 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IX92_13255 SM00861 Transketolase, pyrimidine binding domain IX92_13270 SM00731 SprT homologues. IX92_13295 SM00732 Likely ribonuclease with RNase H fold. IX92_13325 SM01152 IX92_13325 IX92_13340 SM00729 Elongator protein 3, MiaB family, Radical SAM IX92_13355 SM00478 endonuclease III IX92_13355 SM00525 IX92_13355 IX92_13430 SM00316 Ribosomal protein S1-like RNA-binding domain IX92_13455 SM00560 LamG-like jellyroll fold domain IX92_13500 SM00382 ATPases associated with a variety of cellular activities IX92_13505 SM00028 Tetratricopeptide repeats IX92_13510 SM00382 ATPases associated with a variety of cellular activities IX92_13515 SM00965 Secretin and TonB N terminus short domain IX92_13535 SM00052 Putative diguanylate phosphodiesterase IX92_13535 SM00267 diguanylate cyclase IX92_13545 SM00421 helix_turn_helix, Lux Regulon IX92_13585 SM00382 ATPases associated with a variety of cellular activities IX92_13660 SM00382 ATPases associated with a variety of cellular activities IX92_13690 SM01005 Alanine racemase, C-terminal domain IX92_13735 SM00838 Elongation factor G C-terminus IX92_13735 SM00889 Elongation factor G, domain IV IX92_13775 SM00320 WD40 repeats IX92_13790 SM00244 prohibitin homologues IX92_13795 SM00244 prohibitin homologues IX92_13815 SM00853 MutL C terminal dimerisation domain IX92_13815 SM01340 IX92_13815 IX92_13820 SM00257 Lysin motif IX92_13820 SM00646 IX92_13820 IX92_13885 SM00479 IX92_13885 IX92_13905 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_13905 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_13950 SM01321 IX92_13950 IX92_13955 SM01321 IX92_13955 IX92_13960 SM00663 RNA polymerase I subunit A N-terminus IX92_13985 SM00649 Ribosomal protein L11/L12 IX92_13990 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. IX92_13990 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. IX92_14065 SM00841 Elongation factor P, C-terminal IX92_14065 SM01185 IX92_14065 IX92_14100 SM00448 cheY-homologous receiver domain IX92_14100 SM00862 Transcriptional regulatory protein, C terminal IX92_14105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_14105 SM00387 Histidine kinase-like ATPases IX92_14105 SM00388 His Kinase A (phosphoacceptor) domain IX92_14220 SM00859 Semialdehyde dehydrogenase, NAD binding domain IX92_14465 SM00448 cheY-homologous receiver domain IX92_14465 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. IX92_14470 SM00387 Histidine kinase-like ATPases IX92_14470 SM00388 His Kinase A (phosphoacceptor) domain IX92_14470 SM00448 cheY-homologous receiver domain IX92_14550 SM00662 RNA polymerases D IX92_14555 SM00363 S4 RNA-binding domain IX92_14555 SM01390 IX92_14555 IX92_14620 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. IX92_14625 SM01374 IX92_14625 IX92_14645 SM00322 K homology RNA-binding domain IX92_14660 SM01382 IX92_14660 IX92_14660 SM01383 IX92_14660 IX92_14680 SM01403 IX92_14680 IX92_14685 SM00967 RNA 2'-O ribose methyltransferase substrate binding IX92_14690 SM00316 Ribosomal protein S1-like RNA-binding domain IX92_14690 SM00357 Cold shock protein domain IX92_14690 SM00955 IX92_14690 IX92_14700 SM00671 Sel1-like repeats. IX92_14705 SM00788 Adenylosuccinate synthetase IX92_14735 SM00382 ATPases associated with a variety of cellular activities IX92_14760 SM00100 Cyclic nucleotide-monophosphate binding domain IX92_14760 SM00419 helix_turn_helix, cAMP Regulatory protein IX92_14765 SM01150 IX92_14765 IX92_14885 SM00421 helix_turn_helix, Lux Regulon IX92_14885 SM00448 cheY-homologous receiver domain IX92_14910 SM00387 Histidine kinase-like ATPases IX92_14910 SM00388 His Kinase A (phosphoacceptor) domain IX92_14910 SM00448 cheY-homologous receiver domain IX92_14925 SM00479 IX92_14925 IX92_14945 SM00878 Biotin carboxylase C-terminal domain IX92_14965 SM00267 diguanylate cyclase IX92_14970 SM00422 helix_turn_helix, mercury resistance IX92_14975 SM00798 AICARFT/IMPCHase bienzyme IX92_14975 SM00851 MGS-like domain IX92_14980 SM01209 IX92_14980 IX92_14980 SM01210 IX92_14980 IX92_14990 SM00411 bacterial (prokaryotic) histone like domain IX92_15010 SM00986 Uracil DNA glycosylase superfamily IX92_15010 SM00987 UreE urease accessory protein, C-terminal domain IX92_15025 SM00971 Serine acetyltransferase, N-terminal IX92_15040 SM00450 Rhodanese Homology Domain IX92_15075 SM00382 ATPases associated with a variety of cellular activities IX92_15075 SM01086 C-terminal, D2-small domain, of ClpB protein IX92_15090 SM00354 helix_turn _helix lactose operon repressor IX92_15095 SM00487 DEAD-like helicases superfamily IX92_15095 SM00490 helicase superfamily c-terminal domain IX92_15105 SM00919 Malic enzyme, NAD binding domain IX92_15105 SM01274 IX92_15105 IX92_15145 SM00883 Chaperonin 10 Kd subunit IX92_15170 SM00155 Phospholipase D. Active site motifs. IX92_15210 SM00822 IX92_15210 IX92_15300 SM00984 UDP binding domain IX92_15385 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain IX92_15385 SM01232 IX92_15385 IX92_15475 SM00965 Secretin and TonB N terminus short domain IX92_15490 SM00072 Guanylate kinase homologues. IX92_15495 SM01409 IX92_15495 IX92_15500 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. IX92_15500 SM00954 Region found in RelA / SpoT proteins IX92_15510 SM00487 DEAD-like helicases superfamily IX92_15510 SM00490 helicase superfamily c-terminal domain IX92_15545 SM00316 Ribosomal protein S1-like RNA-binding domain IX92_15545 SM00732 Likely ribonuclease with RNase H fold. IX92_15560 SM00448 cheY-homologous receiver domain IX92_15560 SM00862 Transcriptional regulatory protein, C terminal IX92_15565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_15565 SM00387 Histidine kinase-like ATPases IX92_15565 SM00388 His Kinase A (phosphoacceptor) domain IX92_15615 SM00382 ATPases associated with a variety of cellular activities IX92_15630 SM00363 S4 RNA-binding domain IX92_15675 SM01230 IX92_15675 IX92_15680 SM00091 PAS domain IX92_15680 SM00387 Histidine kinase-like ATPases IX92_15680 SM00388 His Kinase A (phosphoacceptor) domain IX92_15685 SM00382 ATPases associated with a variety of cellular activities IX92_15685 SM00448 cheY-homologous receiver domain IX92_15690 SM00052 Putative diguanylate phosphodiesterase IX92_15690 SM00267 diguanylate cyclase IX92_15690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_15760 SM01001 AIR carboxylase IX92_15850 SM00563 Phosphate acyltransferases IX92_15860 SM00382 ATPases associated with a variety of cellular activities IX92_15890 SM00829 Enoylreductase IX92_15925 SM00836 DALR anticodon binding domain IX92_15940 SM00387 Histidine kinase-like ATPases IX92_15940 SM00433 TopoisomeraseII IX92_15950 SM00480 DNA polymerase III beta subunit IX92_15955 SM00382 ATPases associated with a variety of cellular activities IX92_15955 SM00760 Bacterial dnaA protein helix-turn-helix domain IX92_15960 SM00062 Bacterial periplasmic substrate-binding proteins IX92_15960 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. IX92_15970 SM00382 ATPases associated with a variety of cellular activities IX92_16020 SM00382 ATPases associated with a variety of cellular activities IX92_16025 SM00382 ATPases associated with a variety of cellular activities IX92_16060 SM00822 IX92_16060 IX92_16080 SM00364 Leucine-rich repeats, bacterial type IX92_16080 SM00369 Leucine-rich repeats, typical (most populated) subfamily IX92_16115 SM00052 Putative diguanylate phosphodiesterase IX92_16115 SM00267 diguanylate cyclase IX92_16115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_16125 SM00347 helix_turn_helix multiple antibiotic resistance protein IX92_16150 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain IX92_16205 SM00849 Metallo-beta-lactamase superfamily IX92_16230 SM00382 ATPases associated with a variety of cellular activities IX92_16235 SM00382 ATPases associated with a variety of cellular activities IX92_16260 SM00988 UreE urease accessory protein, N-terminal domain IX92_16310 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_16310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_16315 SM00062 Bacterial periplasmic substrate-binding proteins IX92_16325 SM01119 IX92_16325 IX92_16415 SM00849 Metallo-beta-lactamase superfamily IX92_16435 SM00387 Histidine kinase-like ATPases IX92_16440 SM00448 cheY-homologous receiver domain IX92_16440 SM00862 Transcriptional regulatory protein, C terminal IX92_16505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_16505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_16515 SM00344 helix_turn_helix ASNC type IX92_16525 SM00387 Histidine kinase-like ATPases IX92_16525 SM00388 His Kinase A (phosphoacceptor) domain IX92_16525 SM00448 cheY-homologous receiver domain IX92_16545 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IX92_16550 SM01092 CO dehydrogenase flavoprotein C-terminal domain IX92_16555 SM00345 helix_turn_helix gluconate operon transcriptional repressor IX92_16555 SM00895 IX92_16555 IX92_16575 SM00530 Helix-turn-helix XRE-family like proteins IX92_16605 SM00342 helix_turn_helix, arabinose operon control protein IX92_16625 SM00342 helix_turn_helix, arabinose operon control protein IX92_16630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_16630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_16630 SM01049 IX92_16630 IX92_16670 SM00421 helix_turn_helix, Lux Regulon IX92_16685 SM00642 Alpha-amylase domain IX92_16695 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain IX92_16770 SM00342 helix_turn_helix, arabinose operon control protein IX92_16810 SM00563 Phosphate acyltransferases IX92_16860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_16860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_16885 SM00342 helix_turn_helix, arabinose operon control protein IX92_16900 SM00342 helix_turn_helix, arabinose operon control protein IX92_16900 SM00871 Bacterial transcription activator, effector binding domain IX92_16940 SM00248 ankyrin repeats IX92_16965 SM00342 helix_turn_helix, arabinose operon control protein IX92_17000 SM00872 Alpha mannosidase, middle domain IX92_17005 SM00642 Alpha-amylase domain IX92_17030 SM00382 ATPases associated with a variety of cellular activities IX92_17050 SM01006 Siderophore biosynthesis protein domain IX92_17075 SM00347 helix_turn_helix multiple antibiotic resistance protein IX92_17170 SM00382 ATPases associated with a variety of cellular activities IX92_17270 SM00028 Tetratricopeptide repeats IX92_17330 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_17330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_17350 SM00382 ATPases associated with a variety of cellular activities IX92_17355 SM00267 diguanylate cyclase IX92_17390 SM00382 ATPases associated with a variety of cellular activities IX92_17405 SM00671 Sel1-like repeats. IX92_17420 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_17420 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_17435 SM00587 ZnF_C4 abd HLH domain containing kinases domain IX92_17470 SM00344 helix_turn_helix ASNC type IX92_17495 SM00347 helix_turn_helix multiple antibiotic resistance protein IX92_17515 SM00388 His Kinase A (phosphoacceptor) domain IX92_17520 SM00448 cheY-homologous receiver domain IX92_17520 SM00862 Transcriptional regulatory protein, C terminal IX92_17585 SM00267 diguanylate cyclase IX92_17610 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. IX92_17610 SM00382 ATPases associated with a variety of cellular activities IX92_17615 SM00342 helix_turn_helix, arabinose operon control protein IX92_17620 SM00450 Rhodanese Homology Domain IX92_17665 SM00062 Bacterial periplasmic substrate-binding proteins IX92_17695 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins IX92_17710 SM00387 Histidine kinase-like ATPases IX92_17715 SM00448 cheY-homologous receiver domain IX92_17800 SM00530 Helix-turn-helix XRE-family like proteins IX92_17815 SM00382 ATPases associated with a variety of cellular activities IX92_17825 SM00342 helix_turn_helix, arabinose operon control protein IX92_17845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_17845 SM00387 Histidine kinase-like ATPases IX92_17845 SM01049 IX92_17845 IX92_17890 SM00382 ATPases associated with a variety of cellular activities IX92_17905 SM00829 Enoylreductase IX92_17950 SM00244 prohibitin homologues IX92_17965 SM00382 ATPases associated with a variety of cellular activities IX92_17985 SM00530 Helix-turn-helix XRE-family like proteins IX92_18000 SM00642 Alpha-amylase domain IX92_18015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_18015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_18015 SM01049 IX92_18015 IX92_18025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_18025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_18040 SM00422 helix_turn_helix, mercury resistance IX92_18050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_18050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_18060 SM00422 helix_turn_helix, mercury resistance IX92_18115 SM00347 helix_turn_helix multiple antibiotic resistance protein IX92_18120 SM00642 Alpha-amylase domain IX92_18145 SM00342 helix_turn_helix, arabinose operon control protein IX92_18145 SM00871 Bacterial transcription activator, effector binding domain IX92_18165 SM00342 helix_turn_helix, arabinose operon control protein IX92_18170 SM00345 helix_turn_helix gluconate operon transcriptional repressor IX92_18180 SM00344 helix_turn_helix ASNC type IX92_18190 SM01034 Sensors of blue-light using FAD IX92_18195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_18195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_18235 SM00267 diguanylate cyclase IX92_18260 SM00422 helix_turn_helix, mercury resistance IX92_18295 SM00448 cheY-homologous receiver domain IX92_18295 SM00862 Transcriptional regulatory protein, C terminal IX92_18300 SM00387 Histidine kinase-like ATPases IX92_18300 SM00388 His Kinase A (phosphoacceptor) domain IX92_18320 SM00387 Histidine kinase-like ATPases IX92_18320 SM00388 His Kinase A (phosphoacceptor) domain IX92_18320 SM00448 cheY-homologous receiver domain IX92_18340 SM00382 ATPases associated with a variety of cellular activities IX92_18375 SM00450 Rhodanese Homology Domain IX92_18400 SM00642 Alpha-amylase domain IX92_18435 SM00829 Enoylreductase IX92_18445 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. IX92_18445 SM00267 diguanylate cyclase IX92_18450 SM00062 Bacterial periplasmic substrate-binding proteins IX92_18460 SM01022 IX92_18460 IX92_18465 SM00487 DEAD-like helicases superfamily IX92_18465 SM00490 helicase superfamily c-terminal domain IX92_18490 SM00248 ankyrin repeats IX92_18495 SM00560 LamG-like jellyroll fold domain IX92_18500 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor IX92_18500 SM00448 cheY-homologous receiver domain IX92_18505 SM00387 Histidine kinase-like ATPases IX92_18505 SM00388 His Kinase A (phosphoacceptor) domain IX92_18525 SM00382 ATPases associated with a variety of cellular activities IX92_18530 SM00354 helix_turn _helix lactose operon repressor IX92_18560 SM00382 ATPases associated with a variety of cellular activities IX92_18570 SM00640 Glycosyl hydrolases family 32 IX92_18575 SM00642 Alpha-amylase domain IX92_18580 SM01266 IX92_18580 IX92_18665 SM00829 Enoylreductase IX92_18695 SM00344 helix_turn_helix ASNC type IX92_18700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_18700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_18705 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain IX92_18745 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. IX92_18760 SM00382 ATPases associated with a variety of cellular activities IX92_18780 SM01350 IX92_18780 IX92_18795 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. IX92_18805 SM00481 DNA polymerase alpha chain like domain IX92_18820 SM00387 Histidine kinase-like ATPases IX92_18825 SM00421 helix_turn_helix, Lux Regulon IX92_18825 SM00448 cheY-homologous receiver domain IX92_18855 SM00421 helix_turn_helix, Lux Regulon IX92_18860 SM00420 helix_turn_helix, Deoxyribose operon repressor IX92_18860 SM01134 IX92_18860 IX92_18865 SM00091 PAS domain IX92_18865 SM00267 diguanylate cyclase IX92_18875 SM00342 helix_turn_helix, arabinose operon control protein IX92_18895 SM00642 Alpha-amylase domain IX92_18900 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_18900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_18930 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_18955 SM00091 PAS domain IX92_18955 SM00387 Histidine kinase-like ATPases IX92_18955 SM00388 His Kinase A (phosphoacceptor) domain IX92_18955 SM00448 cheY-homologous receiver domain IX92_18960 SM00448 cheY-homologous receiver domain IX92_18960 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. IX92_18965 SM00448 cheY-homologous receiver domain IX92_18985 SM01240 IX92_18985 IX92_19255 SM00062 Bacterial periplasmic substrate-binding proteins IX92_19285 SM00382 ATPases associated with a variety of cellular activities IX92_19335 SM00382 ATPases associated with a variety of cellular activities IX92_19355 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_19355 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_19355 SM01049 IX92_19355 IX92_19365 SM00267 diguanylate cyclase IX92_19385 SM00382 ATPases associated with a variety of cellular activities IX92_19395 SM00267 diguanylate cyclase IX92_19400 SM00052 Putative diguanylate phosphodiesterase IX92_19400 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) IX92_19400 SM00267 diguanylate cyclase IX92_19405 SM00448 cheY-homologous receiver domain IX92_19415 SM00421 helix_turn_helix, Lux Regulon IX92_19415 SM00448 cheY-homologous receiver domain IX92_19445 SM00382 ATPases associated with a variety of cellular activities IX92_19465 SM00267 diguanylate cyclase IX92_19480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_19480 SM00387 Histidine kinase-like ATPases IX92_19480 SM00388 His Kinase A (phosphoacceptor) domain IX92_19485 SM00448 cheY-homologous receiver domain IX92_19485 SM00862 Transcriptional regulatory protein, C terminal IX92_19490 SM00990 IX92_19490 IX92_19505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_19505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_19510 SM00062 Bacterial periplasmic substrate-binding proteins IX92_19510 SM00267 diguanylate cyclase IX92_19540 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. IX92_19540 SM00382 ATPases associated with a variety of cellular activities IX92_19545 SM00382 ATPases associated with a variety of cellular activities IX92_19545 SM01086 C-terminal, D2-small domain, of ClpB protein IX92_19580 SM00220 Serine/Threonine protein kinases, catalytic domain IX92_19615 SM00344 helix_turn_helix ASNC type IX92_19635 SM00240 Forkhead associated domain IX92_19655 SM01038 Beta galactosidase small chain IX92_19675 SM00354 helix_turn _helix lactose operon repressor IX92_19700 SM00822 IX92_19700 IX92_19735 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins IX92_19755 SM00450 Rhodanese Homology Domain IX92_19760 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor IX92_19820 SM00062 Bacterial periplasmic substrate-binding proteins IX92_19885 SM00387 Histidine kinase-like ATPases IX92_19885 SM00388 His Kinase A (phosphoacceptor) domain IX92_19885 SM00448 cheY-homologous receiver domain IX92_19935 SM00271 DnaJ molecular chaperone homology domain IX92_19945 SM00052 Putative diguanylate phosphodiesterase IX92_19945 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. IX92_19945 SM00267 diguanylate cyclase IX92_19960 SM00382 ATPases associated with a variety of cellular activities IX92_19975 SM00797 Allophanate hydrolase subunit 2 IX92_19980 SM00796 Allophanate hydrolase subunit 1 IX92_20005 SM00926 Molybdopterin oxidoreductase Fe4S4 domain IX92_20020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_20020 SM00387 Histidine kinase-like ATPases IX92_20025 SM00421 helix_turn_helix, Lux Regulon IX92_20025 SM00448 cheY-homologous receiver domain IX92_20055 SM00867 YceI-like domain IX92_20060 SM00116 Domain in cystathionine beta-synthase and other proteins. IX92_20100 SM00062 Bacterial periplasmic substrate-binding proteins IX92_20105 SM00052 Putative diguanylate phosphodiesterase IX92_20105 SM00267 diguanylate cyclase IX92_20105 SM01049 IX92_20105 IX92_20110 SM00830 Chorismate mutase type II IX92_20355 SM00782 PhnA Zinc-Ribbon IX92_20400 SM00881 CoA binding domain IX92_20550 SM00448 cheY-homologous receiver domain IX92_20550 SM00862 Transcriptional regulatory protein, C terminal IX92_20555 SM00387 Histidine kinase-like ATPases IX92_20555 SM00388 His Kinase A (phosphoacceptor) domain IX92_20565 SM01002 Alanine dehydrogenase/PNT, C-terminal domain IX92_20565 SM01003 Alanine dehydrogenase/PNT, N-terminal domain IX92_20580 SM00267 diguanylate cyclase IX92_20585 SM00267 diguanylate cyclase IX92_20585 SM00448 cheY-homologous receiver domain IX92_20595 SM00382 ATPases associated with a variety of cellular activities IX92_20625 SM00354 helix_turn _helix lactose operon repressor IX92_20650 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) IX92_20650 SM00267 diguanylate cyclase IX92_20660 SM00342 helix_turn_helix, arabinose operon control protein IX92_20680 SM00073 Histidine Phosphotransfer domain IX92_20680 SM00387 Histidine kinase-like ATPases IX92_20680 SM00388 His Kinase A (phosphoacceptor) domain IX92_20680 SM00448 cheY-homologous receiver domain IX92_20690 SM00851 MGS-like domain IX92_20695 SM00345 helix_turn_helix gluconate operon transcriptional repressor IX92_20695 SM00866 IX92_20695 IX92_20700 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain IX92_20750 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_20815 SM00487 DEAD-like helicases superfamily IX92_20815 SM00490 helicase superfamily c-terminal domain IX92_20840 SM00487 DEAD-like helicases superfamily IX92_20840 SM00490 helicase superfamily c-terminal domain IX92_20850 SM00852 Probable molybdopterin binding domain IX92_20865 SM00450 Rhodanese Homology Domain IX92_20895 SM00861 Transketolase, pyrimidine binding domain IX92_20900 SM00344 helix_turn_helix ASNC type IX92_20940 SM00344 helix_turn_helix ASNC type IX92_20950 SM00091 PAS domain IX92_20950 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_20955 SM00267 diguanylate cyclase IX92_20965 SM00267 diguanylate cyclase IX92_20980 SM00495 Chitin-binding domain type 3 IX92_20990 SM00833 Cobalamin synthesis protein cobW C-terminal domain IX92_21010 SM00387 Histidine kinase-like ATPases IX92_21010 SM00448 cheY-homologous receiver domain IX92_21060 SM00382 ATPases associated with a variety of cellular activities IX92_21075 SM01012 IX92_21075 IX92_21090 SM00926 Molybdopterin oxidoreductase Fe4S4 domain IX92_21140 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. IX92_21140 SM00267 diguanylate cyclase IX92_21145 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_21145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_21155 SM00861 Transketolase, pyrimidine binding domain IX92_21165 SM00267 diguanylate cyclase IX92_21170 SM00893 Electron transfer flavoprotein domain IX92_21175 SM00893 Electron transfer flavoprotein domain IX92_21190 SM00822 IX92_21190 IX92_21225 SM00422 helix_turn_helix, mercury resistance IX92_21255 SM00342 helix_turn_helix, arabinose operon control protein IX92_21260 SM00342 helix_turn_helix, arabinose operon control protein IX92_21320 SM00052 Putative diguanylate phosphodiesterase IX92_21400 SM00052 Putative diguanylate phosphodiesterase IX92_21400 SM00267 diguanylate cyclase IX92_21415 SM00342 helix_turn_helix, arabinose operon control protein IX92_21425 SM00422 helix_turn_helix, mercury resistance IX92_21430 SM00100 Cyclic nucleotide-monophosphate binding domain IX92_21430 SM00116 Domain in cystathionine beta-synthase and other proteins. IX92_21435 SM00479 IX92_21435 IX92_21445 SM00347 helix_turn_helix multiple antibiotic resistance protein IX92_21450 SM00267 diguanylate cyclase IX92_21455 SM00344 helix_turn_helix ASNC type IX92_21480 SM00327 von Willebrand factor (vWF) type A domain IX92_21485 SM00382 ATPases associated with a variety of cellular activities IX92_21505 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins IX92_21505 SM00495 Chitin-binding domain type 3 IX92_21505 SM00636 IX92_21505 IX92_21520 SM00260 Two component signalling adaptor domain IX92_21520 SM00448 cheY-homologous receiver domain IX92_21525 SM00267 diguanylate cyclase IX92_21565 SM00631 IX92_21565 IX92_21585 SM00345 helix_turn_helix gluconate operon transcriptional repressor IX92_21585 SM00866 IX92_21585 IX92_21595 SM00382 ATPases associated with a variety of cellular activities IX92_21690 SM00862 Transcriptional regulatory protein, C terminal IX92_21780 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) IX92_21780 SM00091 PAS domain IX92_21780 SM00387 Histidine kinase-like ATPases IX92_21780 SM00388 His Kinase A (phosphoacceptor) domain IX92_21780 SM00448 cheY-homologous receiver domain IX92_21785 SM00448 cheY-homologous receiver domain IX92_21790 SM00448 cheY-homologous receiver domain IX92_21800 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor IX92_21845 SM01057 Eukaryotic-type carbonic anhydrase IX92_21860 SM00829 Enoylreductase IX92_21870 SM00052 Putative diguanylate phosphodiesterase IX92_21875 SM00448 cheY-homologous receiver domain IX92_21880 SM00530 Helix-turn-helix XRE-family like proteins IX92_21905 SM00387 Histidine kinase-like ATPases IX92_21905 SM00388 His Kinase A (phosphoacceptor) domain IX92_21910 SM00448 cheY-homologous receiver domain IX92_21910 SM00862 Transcriptional regulatory protein, C terminal IX92_21925 SM00448 cheY-homologous receiver domain IX92_21925 SM00862 Transcriptional regulatory protein, C terminal IX92_21930 SM00388 His Kinase A (phosphoacceptor) domain IX92_21960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_21960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_21980 SM00327 von Willebrand factor (vWF) type A domain IX92_21985 SM00028 Tetratricopeptide repeats IX92_22005 SM01266 IX92_22005 IX92_22030 SM00344 helix_turn_helix ASNC type IX92_22045 SM00345 helix_turn_helix gluconate operon transcriptional repressor IX92_22055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_22055 SM00387 Histidine kinase-like ATPases IX92_22055 SM00388 His Kinase A (phosphoacceptor) domain IX92_22060 SM00448 cheY-homologous receiver domain IX92_22060 SM00862 Transcriptional regulatory protein, C terminal IX92_22075 SM00342 helix_turn_helix, arabinose operon control protein IX92_22110 SM00387 Histidine kinase-like ATPases IX92_22110 SM00388 His Kinase A (phosphoacceptor) domain IX92_22110 SM00448 cheY-homologous receiver domain IX92_22125 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IX92_22175 SM00382 ATPases associated with a variety of cellular activities IX92_22195 SM00729 Elongator protein 3, MiaB family, Radical SAM IX92_22225 SM00382 ATPases associated with a variety of cellular activities IX92_22235 SM00342 helix_turn_helix, arabinose operon control protein IX92_22265 SM00357 Cold shock protein domain IX92_22265 SM00955 IX92_22265 IX92_22275 SM00487 DEAD-like helicases superfamily IX92_22275 SM00490 helicase superfamily c-terminal domain IX92_22285 SM00387 Histidine kinase-like ATPases IX92_22290 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. IX92_22295 SM00354 helix_turn _helix lactose operon repressor IX92_22315 SM00382 ATPases associated with a variety of cellular activities IX92_22330 SM00495 Chitin-binding domain type 3 IX92_22340 SM00984 UDP binding domain IX92_22345 SM00387 Histidine kinase-like ATPases IX92_22370 SM00345 helix_turn_helix gluconate operon transcriptional repressor IX92_22395 SM00506 Appr-1"-p processing enzyme IX92_22400 SM00886 Stress responsive A/B Barrel Domain IX92_22430 SM00382 ATPases associated with a variety of cellular activities IX92_22455 SM00530 Helix-turn-helix XRE-family like proteins IX92_22460 SM00354 helix_turn _helix lactose operon repressor IX92_22465 SM01350 IX92_22465 IX92_22495 SM00267 diguanylate cyclase IX92_22495 SM01079 IX92_22495 IX92_22515 SM00267 diguanylate cyclase IX92_22625 SM00342 helix_turn_helix, arabinose operon control protein IX92_22665 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain IX92_22670 SM00530 Helix-turn-helix XRE-family like proteins IX92_22685 SM00267 diguanylate cyclase IX92_22695 SM00387 Histidine kinase-like ATPases IX92_22695 SM00388 His Kinase A (phosphoacceptor) domain IX92_22700 SM00448 cheY-homologous receiver domain IX92_22700 SM00862 Transcriptional regulatory protein, C terminal IX92_22715 SM00829 Enoylreductase IX92_22735 SM00822 IX92_22735 IX92_22735 SM00823 Phosphopantetheine attachment site IX92_22735 SM00825 Beta-ketoacyl synthase IX92_22735 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. IX92_22765 SM00382 ATPases associated with a variety of cellular activities IX92_22770 SM00382 ATPases associated with a variety of cellular activities IX92_22790 SM00642 Alpha-amylase domain IX92_22795 SM00642 Alpha-amylase domain IX92_22825 SM00448 cheY-homologous receiver domain IX92_22825 SM00850 LytTr DNA-binding domain IX92_22830 SM00387 Histidine kinase-like ATPases IX92_22850 SM00382 ATPases associated with a variety of cellular activities IX92_22895 SM00936 Penicillin-binding protein 5, C-terminal domain IX92_22915 SM00357 Cold shock protein domain IX92_22920 SM01322 IX92_22920 IX92_22935 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. IX92_22935 SM00382 ATPases associated with a variety of cellular activities IX92_22995 SM00052 Putative diguanylate phosphodiesterase IX92_22995 SM00267 diguanylate cyclase IX92_23015 SM00421 helix_turn_helix, Lux Regulon IX92_23020 SM00020 Trypsin-like serine protease IX92_23025 SM00020 Trypsin-like serine protease IX92_23035 SM00710 Parallel beta-helix repeats IX92_23085 SM00984 UDP binding domain IX92_23095 SM00226 Low molecular weight phosphatase family IX92_23110 SM00052 Putative diguanylate phosphodiesterase IX92_23125 SM00642 Alpha-amylase domain IX92_23140 SM00382 ATPases associated with a variety of cellular activities IX92_23150 SM00062 Bacterial periplasmic substrate-binding proteins IX92_23150 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. IX92_23305 SM00936 Penicillin-binding protein 5, C-terminal domain IX92_23355 SM00862 Transcriptional regulatory protein, C terminal IX92_23470 SM00495 Chitin-binding domain type 3 IX92_23490 SM00054 EF-hand, calcium binding motif IX92_23495 SM00729 Elongator protein 3, MiaB family, Radical SAM IX92_23510 SM00347 helix_turn_helix multiple antibiotic resistance protein IX92_23525 SM00342 helix_turn_helix, arabinose operon control protein IX92_23540 SM00382 ATPases associated with a variety of cellular activities IX92_23545 SM01130 IX92_23545 IX92_23575 SM00345 helix_turn_helix gluconate operon transcriptional repressor IX92_23575 SM00895 IX92_23575 IX92_23600 SM00382 ATPases associated with a variety of cellular activities IX92_23605 SM00382 ATPases associated with a variety of cellular activities IX92_23650 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins IX92_23655 SM00487 DEAD-like helicases superfamily IX92_23655 SM00490 helicase superfamily c-terminal domain IX92_23665 SM00257 Lysin motif IX92_23675 SM00422 helix_turn_helix, mercury resistance IX92_23695 SM00028 Tetratricopeptide repeats IX92_23700 SM00028 Tetratricopeptide repeats IX92_23700 SM00267 diguanylate cyclase IX92_23755 SM00382 ATPases associated with a variety of cellular activities IX92_23765 SM00344 helix_turn_helix ASNC type IX92_23790 SM00342 helix_turn_helix, arabinose operon control protein IX92_23805 SM00421 helix_turn_helix, Lux Regulon IX92_23825 SM00052 Putative diguanylate phosphodiesterase IX92_23825 SM00267 diguanylate cyclase IX92_23830 SM00382 ATPases associated with a variety of cellular activities IX92_23835 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins IX92_23835 SM00495 Chitin-binding domain type 3 IX92_23835 SM00636 IX92_23835 IX92_23850 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. IX92_23910 SM00420 helix_turn_helix, Deoxyribose operon repressor IX92_23910 SM01134 IX92_23910 IX92_23970 SM00062 Bacterial periplasmic substrate-binding proteins IX92_24115 SM00342 helix_turn_helix, arabinose operon control protein IX92_24125 SM00052 Putative diguanylate phosphodiesterase IX92_24130 SM00495 Chitin-binding domain type 3 IX92_24140 SM00342 helix_turn_helix, arabinose operon control protein IX92_24140 SM00871 Bacterial transcription activator, effector binding domain IX92_24180 SM00342 helix_turn_helix, arabinose operon control protein IX92_24180 SM01009 AlkA N-terminal domain IX92_24195 SM00387 Histidine kinase-like ATPases IX92_24195 SM00388 His Kinase A (phosphoacceptor) domain IX92_24200 SM00448 cheY-homologous receiver domain IX92_24200 SM00862 Transcriptional regulatory protein, C terminal IX92_24240 SM00448 cheY-homologous receiver domain IX92_24240 SM00862 Transcriptional regulatory protein, C terminal IX92_24245 SM00387 Histidine kinase-like ATPases IX92_24245 SM00388 His Kinase A (phosphoacceptor) domain IX92_24295 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor IX92_24340 SM00829 Enoylreductase IX92_24370 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. IX92_24370 SM00267 diguanylate cyclase IX92_24385 SM00382 ATPases associated with a variety of cellular activities IX92_24425 SM00014 Acid phosphatase homologues IX92_24435 SM00342 helix_turn_helix, arabinose operon control protein IX92_24435 SM00871 Bacterial transcription activator, effector binding domain IX92_24470 SM00382 ATPases associated with a variety of cellular activities IX92_24485 SM00829 Enoylreductase IX92_24510 SM01119 IX92_24510 IX92_24520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_24520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_24545 SM00382 ATPases associated with a variety of cellular activities IX92_24600 SM00857 Resolvase, N terminal domain IX92_24610 SM00100 Cyclic nucleotide-monophosphate binding domain IX92_24640 SM00342 helix_turn_helix, arabinose operon control protein IX92_24655 SM00331 Sigma factor PP2C-like phosphatases IX92_24655 SM00448 cheY-homologous receiver domain IX92_24665 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_24670 SM00448 cheY-homologous receiver domain IX92_24680 SM00138 Methyltransferase, chemotaxis proteins IX92_24685 SM00091 PAS domain IX92_24685 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_24685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_24690 SM00260 Two component signalling adaptor domain IX92_24695 SM00260 Two component signalling adaptor domain IX92_24700 SM00073 Histidine Phosphotransfer domain IX92_24700 SM00260 Two component signalling adaptor domain IX92_24700 SM00387 Histidine kinase-like ATPases IX92_24700 SM01231 IX92_24700 IX92_24705 SM00448 cheY-homologous receiver domain IX92_24715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_24715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_24725 SM00470 ParB-like nuclease domain IX92_24875 SM00953 IX92_24875 IX92_25275 SM00244 prohibitin homologues IX92_25360 SM00327 von Willebrand factor (vWF) type A domain IX92_25610 SM00480 DNA polymerase III beta subunit IX92_25690 SM00470 ParB-like nuclease domain IX92_25700 SM00487 DEAD-like helicases superfamily IX92_25715 SM00528 Domain in histone-like proteins of HNS family IX92_25725 SM00267 diguanylate cyclase IX92_26160 SM00387 Histidine kinase-like ATPases IX92_26160 SM00388 His Kinase A (phosphoacceptor) domain IX92_26165 SM00448 cheY-homologous receiver domain IX92_26165 SM00862 Transcriptional regulatory protein, C terminal IX92_26310 SM00052 Putative diguanylate phosphodiesterase IX92_26405 SM00358 Double-stranded RNA binding motif IX92_26405 SM00955 IX92_26405 IX92_26450 SM00020 Trypsin-like serine protease IX92_26715 SM00382 ATPases associated with a variety of cellular activities IX92_26780 SM00530 Helix-turn-helix XRE-family like proteins IX92_26820 SM00382 ATPases associated with a variety of cellular activities IX92_26825 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_26825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_26845 SM00530 Helix-turn-helix XRE-family like proteins IX92_26935 SM00327 von Willebrand factor (vWF) type A domain IX92_26950 SM00530 Helix-turn-helix XRE-family like proteins IX92_27030 SM00052 Putative diguanylate phosphodiesterase IX92_27175 SM00862 Transcriptional regulatory protein, C terminal IX92_27200 SM00448 cheY-homologous receiver domain IX92_27205 SM00448 cheY-homologous receiver domain IX92_27215 SM00387 Histidine kinase-like ATPases IX92_27215 SM00388 His Kinase A (phosphoacceptor) domain IX92_27220 SM00052 Putative diguanylate phosphodiesterase IX92_27220 SM00448 cheY-homologous receiver domain IX92_27225 SM00448 cheY-homologous receiver domain IX92_27235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_27235 SM00387 Histidine kinase-like ATPases IX92_27235 SM00388 His Kinase A (phosphoacceptor) domain IX92_27260 SM00387 Histidine kinase-like ATPases IX92_27305 SM00822 IX92_27305 IX92_27330 SM00448 cheY-homologous receiver domain IX92_27330 SM00862 Transcriptional regulatory protein, C terminal IX92_27335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_27335 SM00387 Histidine kinase-like ATPases IX92_27335 SM00388 His Kinase A (phosphoacceptor) domain IX92_27375 SM00271 DnaJ molecular chaperone homology domain IX92_27390 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor IX92_27410 SM00476 deoxyribonuclease I IX92_27425 SM00028 Tetratricopeptide repeats IX92_27430 SM00014 Acid phosphatase homologues IX92_27435 SM00421 helix_turn_helix, Lux Regulon IX92_27445 SM01004 Delta-aminolevulinic acid dehydratase IX92_27480 SM00829 Enoylreductase IX92_27505 SM00530 Helix-turn-helix XRE-family like proteins IX92_27515 SM00966 SpoVT / AbrB like domain IX92_27525 SM00822 IX92_27525 IX92_27565 SM01118 IX92_27565 IX92_27640 SM00345 helix_turn_helix gluconate operon transcriptional repressor IX92_27775 SM00860 SMI1 / KNR4 family IX92_27825 SM00382 ATPases associated with a variety of cellular activities IX92_27835 SM00382 ATPases associated with a variety of cellular activities IX92_27870 SM00530 Helix-turn-helix XRE-family like proteins IX92_27885 SM00342 helix_turn_helix, arabinose operon control protein IX92_27920 SM00632 IX92_27920 IX92_27920 SM00642 Alpha-amylase domain IX92_27935 SM00342 helix_turn_helix, arabinose operon control protein IX92_27945 SM00382 ATPases associated with a variety of cellular activities IX92_27950 SM00382 ATPases associated with a variety of cellular activities IX92_27975 SM00354 helix_turn _helix lactose operon repressor IX92_27990 SM00342 helix_turn_helix, arabinose operon control protein IX92_28000 SM00155 Phospholipase D. Active site motifs. IX92_28085 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. IX92_28085 SM00267 diguanylate cyclase IX92_28110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_28110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_28130 SM00382 ATPases associated with a variety of cellular activities IX92_28340 SM00354 helix_turn _helix lactose operon repressor IX92_28450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_28450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_28450 SM01049 IX92_28450 IX92_28475 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). IX92_28475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain IX92_28480 SM00052 Putative diguanylate phosphodiesterase IX92_28505 SM00387 Histidine kinase-like ATPases IX92_28510 SM01034 Sensors of blue-light using FAD IX92_28560 SM00530 Helix-turn-helix XRE-family like proteins