locus-tag	class	description
CTT30_00015	COG0592	DNA-directed DNA polymerase activity
CTT30_00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CTT30_00025	COG0187	DNA topoisomerase II activity
CTT30_00035	COG3977	Valine--pyruvate aminotransferase
CTT30_00045	COG0752	glycyl-tRNA synthetase alpha subunit
CTT30_00050	COG2119	membrane
CTT30_00060	COG0425	Belongs to the sulfur carrier protein TusA family
CTT30_00075	COG0604	alcohol dehydrogenase
CTT30_00085	COG0129	dihydroxy-acid dehydratase activity
CTT30_00090	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CTT30_00095	COG3978	acetolactate synthase activity
CTT30_00105	COG0606	chelatase, subunit chli
CTT30_00140	COG0464	growth
CTT30_00145	COG1061	Type III restriction enzyme res subunit
CTT30_00210	COG0204	Acyl-transferase
CTT30_00215	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CTT30_00220	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CTT30_00230	COG3084	Protein conserved in bacteria
CTT30_00240	COG4326	sporulation control protein
CTT30_00245	COG1272	protein, Hemolysin III
CTT30_00255	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CTT30_00260	COG0569	domain protein
CTT30_00265	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CTT30_00265	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CTT30_00275	COG0242	peptide deformylase activity
CTT30_00280	COG0758	DNA mediated transformation
CTT30_00285	COG2922	Belongs to the Smg family
CTT30_00290	COG0551	DNA topoisomerase type I activity
CTT30_00295	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CTT30_00300	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CTT30_00310	COG0408	coproporphyrinogen oxidase activity
CTT30_00325	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CTT30_00400	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CTT30_00405	COG5001	Diguanylate cyclase
CTT30_00405	COG3300	MHYT domain
CTT30_00415	COG3852	Histidine kinase
CTT30_00420	COG0174	glutamine synthetase
CTT30_00425	COG1217	gtp-binding protein TYPA
CTT30_00440	COG1295	ribonuclease BN
CTT30_00445	COG1490	D-aminoacyl-tRNA deacylase activity
CTT30_00450	COG0456	acetyltransferase
CTT30_00460	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
CTT30_00465	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CTT30_00470	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CTT30_00475	COG3031	protein transport across the cell outer membrane
CTT30_00485	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CTT30_00490	COG1459	type II secretion system
CTT30_00495	COG2165	general secretion pathway protein
CTT30_00500	COG2165	general secretion pathway protein
CTT30_00505	COG2165	general secretion pathway protein
CTT30_00510	COG4795	General secretion pathway protein
CTT30_00515	COG3156	type II secretion system protein K
CTT30_00520	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
CTT30_00525	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
CTT30_00545	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CTT30_00555	COG2183	response to ionizing radiation
CTT30_00570	COG1040	competence protein
CTT30_00580	COG0494	nUDIX hydrolase
CTT30_00585	COG1218	3'(2'),5'-bisphosphate nucleotidase
CTT30_00590	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CTT30_00595	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
CTT30_00600	COG1561	YicC-like family, N-terminal region
CTT30_00605	COG2252	PERMEase
CTT30_00610	COG0194	GDP metabolic process
CTT30_00615	COG1758	RNA polymerase activity
CTT30_00620	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CTT30_00625	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CTT30_00630	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CTT30_00635	COG1560	Kdo2-lipid A biosynthetic process
CTT30_00640	COG1560	Kdo2-lipid A biosynthetic process
CTT30_00645	COG1309	transcriptional regulator
CTT30_00655	COG2003	Belongs to the UPF0758 family
CTT30_00660	COG0227	Belongs to the bacterial ribosomal protein bL28 family
CTT30_00680	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CTT30_00685	COG0859	PFAM glycosyl transferase family 9
CTT30_00690	COG0463	Glycosyl transferase, family 2
CTT30_00695	COG0859	PFAM glycosyl transferase family 9
CTT30_00700	COG3642	lipopolysaccharide core region biosynthetic process
CTT30_00750	COG1519	Transferase
CTT30_00765	COG0859	PFAM glycosyl transferase family 9
CTT30_00780	COG3307	-O-antigen
CTT30_00810	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CTT30_00825	COG1132	(ABC) transporter
CTT30_00830	COG1086	Polysaccharide biosynthesis protein
CTT30_00835	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CTT30_00840	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CTT30_00845	COG2089	acid synthase
CTT30_00865	COG1083	cytidylyl-transferase
CTT30_00900	COG1215	transferase activity, transferring glycosyl groups
CTT30_00920	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CTT30_00925	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CTT30_00930	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
CTT30_00930	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
CTT30_00935	COG0812	UDP-N-acetylmuramate dehydrogenase activity
CTT30_00975	COG1494	fructose-1,6-bisphosphatase
CTT30_00980	COG3074	FtsZ-dependent cytokinesis
CTT30_00985	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CTT30_00990	COG0460	homoserine dehydrogenase
CTT30_00990	COG0527	aspartate kinase activity
CTT30_00995	COG0626	cystathionine gamma-synthase activity
CTT30_01000	COG3060	This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis
CTT30_01005	COG0281	malic enzyme
CTT30_01015	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CTT30_01020	COG1609	Transcriptional regulator
CTT30_01025	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CTT30_01030	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CTT30_01050	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
CTT30_01055	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CTT30_01060	COG1053	succinate dehydrogenase
CTT30_01065	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
CTT30_01070	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CTT30_01105	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CTT30_01120	COG1045	serine acetyltransferase
CTT30_01125	COG1695	Transcriptional regulator
CTT30_01130	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CTT30_01135	COG1573	uracil-dna glycosylase
CTT30_01140	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CTT30_01150	COG1253	flavin adenine dinucleotide binding
CTT30_01165	COG0151	Belongs to the GarS family
CTT30_01170	COG0138	bifunctional purine biosynthesis protein purh
CTT30_01180	COG0789	Transcriptional regulator
CTT30_01185	COG2199	diguanylate cyclase activity
CTT30_01190	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
CTT30_01195	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CTT30_01200	COG2264	protein methyltransferase activity
CTT30_01205	COG0439	Biotin carboxylase
CTT30_01210	COG0511	ligase activity, forming carbon-carbon bonds
CTT30_01215	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
CTT30_01220	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CTT30_01235	COG2814	Major facilitator Superfamily
CTT30_01240	COG0784	Response regulator, receiver
CTT30_01240	COG2205	protein histidine kinase activity
CTT30_01245	COG1072	(Pantothenic acid kinase))
CTT30_01270	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CTT30_01280	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CTT30_01285	COG0250	Participates in transcription elongation, termination and antitermination
CTT30_01300	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CTT30_01310	COG0085	RNA polymerase activity
CTT30_01315	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CTT30_01320	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CTT30_01325	COG1027	Aspartate ammonia-lyase
CTT30_01400	COG0512	Glutamine amidotransferase of anthranilate synthase
CTT30_01405	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CTT30_01415	COG1012	belongs to the aldehyde dehydrogenase family
CTT30_01425	COG0688	phosphatidylethanolamine metabolic process
CTT30_01430	COG1162	GTPase activity
CTT30_01485	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CTT30_01490	COG0802	atpase or kinase
CTT30_01495	COG0860	N-Acetylmuramoyl-L-alanine amidase
CTT30_01500	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CTT30_01515	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CTT30_01520	COG0330	HflC and HflK could
CTT30_01525	COG0330	HflC and HflK could
CTT30_01530	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
CTT30_01535	COG2900	Belongs to the SlyX family
CTT30_01545	COG0545	Peptidyl-prolyl cis-trans isomerase
CTT30_01550	COG2964	Protein conserved in bacteria
CTT30_01555	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
CTT30_01560	COG2923	Belongs to the DsrF TusC family
CTT30_01565	COG2168	tRNA wobble position uridine thiolation
CTT30_01575	COG0049	tRNA binding
CTT30_01580	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CTT30_01585	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CTT30_01590	COG2906	2 iron, 2 sulfur cluster binding
CTT30_01600	COG0360	Binds together with S18 to 16S ribosomal RNA
CTT30_01620	COG0305	Participates in initiation and elongation during chromosome replication
CTT30_01625	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CTT30_01630	COG0432	Pfam Uncharacterised protein family UPF0047
CTT30_01655	COG1136	(ABC) transporter
CTT30_01670	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
CTT30_01680	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CTT30_01685	COG0729	surface antigen
CTT30_01690	COG2911	Protein conserved in bacteria
CTT30_01695	COG2105	PFAM AIG2 family protein
CTT30_01700	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CTT30_01710	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CTT30_01715	COG0163	prenyltransferase activity
CTT30_01720	COG4143	(ABC) transporter
CTT30_01725	COG1178	ABC-type Fe3 transport system permease component
CTT30_01730	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
CTT30_01740	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CTT30_01755	COG0629	single-stranded DNA binding
CTT30_01760	COG2200	EAL domain
CTT30_01760	COG2199	diguanylate cyclase activity
CTT30_01785	COG3409	Peptidoglycan-binding domain 1 protein
CTT30_01785	COG3267	Type II secretory pathway component ExeA
CTT30_01795	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CTT30_01800	COG1459	type II secretion system
CTT30_01810	COG2165	general secretion pathway protein
CTT30_01815	COG2165	general secretion pathway protein
CTT30_01845	COG1077	Cell shape determining protein MreB Mrl
CTT30_01850	COG1792	Involved in formation and maintenance of cell shape
CTT30_01855	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
CTT30_01860	COG0424	maF-like protein
CTT30_01870	COG3164	Protein of unknown function
CTT30_01875	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CTT30_01880	COG0312	modulator of DNA gyrase
CTT30_01935	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
CTT30_01945	COG0220	tRNA (guanine-N7-)-methyltransferase activity
CTT30_01950	COG2066	Belongs to the glutaminase family
CTT30_01955	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CTT30_01960	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CTT30_02005	COG0762	integral membrane protein
CTT30_02010	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CTT30_02015	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CTT30_02030	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CTT30_02035	COG1678	Uncharacterized ACR, COG1678
CTT30_02040	COG0189	ligase activity
CTT30_02045	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CTT30_02050	COG2356	endonuclease I
CTT30_02055	COG3091	SprT-like family
CTT30_02065	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CTT30_02070	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CTT30_02075	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CTT30_02085	COG0191	fructose-bisphosphate aldolase activity
CTT30_02090	COG0668	transmembrane transport
CTT30_02105	COG0583	DNA-binding transcription factor activity
CTT30_02115	COG3706	GGDEF domain
CTT30_02125	COG0469	pyruvate kinase activity
CTT30_02130	COG1349	DNA-binding transcription factor activity
CTT30_02135	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CTT30_02150	COG0473	3-isopropylmalate dehydrogenase activity
CTT30_02155	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CTT30_02170	COG0583	DNA-binding transcription factor activity
CTT30_02175	COG1022	Amp-dependent synthetase and ligase
CTT30_02180	COG0028	Belongs to the TPP enzyme family
CTT30_02185	COG0440	acetolactate synthase activity
CTT30_02190	COG0584	glycerophosphoryl diester phosphodiesterase
CTT30_02195	COG2271	Major facilitator Superfamily
CTT30_02200	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CTT30_02210	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CTT30_02225	COG3079	Belongs to the UPF0149 family
CTT30_02230	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CTT30_02235	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CTT30_02255	COG0354	folic acid binding
CTT30_02260	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
CTT30_02270	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CTT30_02275	COG1595	DNA-templated transcription, initiation
CTT30_02285	COG3026	antisigma factor binding
CTT30_02290	COG3086	response to oxidative stress
CTT30_02295	COG0481	GTPase activity
CTT30_02305	COG0571	ribonuclease III activity
CTT30_02310	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CTT30_02315	COG1381	Involved in DNA repair and RecF pathway recombination
CTT30_02320	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
CTT30_02325	COG0736	holo-[acyl-carrier-protein] synthase activity
CTT30_02330	COG2205	protein histidine kinase activity
CTT30_02330	COG3437	response regulator, receiver
CTT30_02330	COG3850	Histidine kinase
CTT30_02330	COG4999	Histidine kinase
CTT30_02335	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CTT30_02340	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CTT30_02345	COG3956	TIGRFAM MazG family protein
CTT30_02355	COG0148	phosphopyruvate hydratase activity
CTT30_02360	COG0617	tRNA 3'-terminal CCA addition
CTT30_02365	COG3267	Type II secretory pathway component ExeA
CTT30_02365	COG3409	Peptidoglycan-binding domain 1 protein
CTT30_02375	COG4991	sh3 domain protein
CTT30_02380	COG0306	phosphate transporter
CTT30_02385	COG1392	Phosphate transport regulator
CTT30_02390	COG3025	triphosphatase activity
CTT30_02395	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CTT30_02405	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
CTT30_02410	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
CTT30_02410	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
CTT30_02415	COG0745	RESPONSE REGULATOR receiver
CTT30_02430	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CTT30_02445	COG0083	homoserine kinase activity
CTT30_02450	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
CTT30_02455	COG2860	membrane
CTT30_02470	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CTT30_02475	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CTT30_02495	COG0534	Mate efflux family protein
CTT30_02500	COG2204	response regulator
CTT30_02510	COG0667	Aldo Keto reductase
CTT30_02520	COG3066	DNA modification
CTT30_02525	COG0494	nUDIX hydrolase
CTT30_02535	COG0730	response to heat
CTT30_02540	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CTT30_02545	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CTT30_02550	COG1283	sodium-dependent phosphate transmembrane transporter activity
CTT30_02555	COG0583	DNA-binding transcription factor activity
CTT30_02560	COG0640	Transcriptional regulator
CTT30_02565	COG0268	Binds directly to 16S ribosomal RNA
CTT30_02570	COG0728	peptidoglycan biosynthetic process
CTT30_02575	COG0196	riboflavin kinase activity
CTT30_02590	COG1047	Peptidyl-prolyl cis-trans
CTT30_02595	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
CTT30_02600	COG1966	Carbon starvation protein
CTT30_02610	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
CTT30_02615	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
CTT30_02620	COG2971	BadF BadG BcrA BcrD
CTT30_02630	COG1737	Transcriptional regulator
CTT30_02640	COG3279	Response regulator of the LytR AlgR family
CTT30_02645	COG3275	phosphorelay sensor kinase activity
CTT30_02650	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CTT30_02655	COG1605	Chorismate mutase
CTT30_02655	COG0287	Prephenate dehydrogenase
CTT30_02660	COG0739	heme binding
CTT30_02670	COG0488	(ABC) transporter
CTT30_02675	COG0741	lytic transglycosylase activity
CTT30_02680	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
CTT30_02685	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
CTT30_02690	COG5001	Diguanylate cyclase
CTT30_02695	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CTT30_02700	COG0077	Prephenate dehydratase
CTT30_02700	COG1605	Chorismate mutase
CTT30_02705	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CTT30_02710	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
CTT30_02715	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CTT30_02720	COG0564	pseudouridine synthase activity
CTT30_02725	COG1496	oxidoreductase activity
CTT30_02730	COG0542	response to heat
CTT30_02780	COG0483	inositol monophosphate 1-phosphatase activity
CTT30_02785	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
CTT30_02795	COG1104	cysteine desulfurase activity
CTT30_02800	COG0822	iron-sulfur transferase activity
CTT30_02815	COG0443	Heat shock 70 kDa protein
CTT30_02820	COG0633	Ferredoxin
CTT30_02825	COG2975	iron-sulfur cluster assembly
CTT30_02840	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CTT30_02845	COG0583	DNA-binding transcription factor activity
CTT30_02855	COG0583	DNA-binding transcription factor activity
CTT30_02860	COG1022	Amp-dependent synthetase and ligase
CTT30_02865	COG2169	Transcriptional regulator
CTT30_02890	COG4964	Belongs to the GSP D family
CTT30_02940	COG2059	Chromate
CTT30_02945	COG0583	DNA-binding transcription factor activity
CTT30_02955	COG2169	Transcriptional regulator
CTT30_02960	COG1486	melibiose metabolic process
CTT30_02965	COG2211	Major facilitator Superfamily
CTT30_02980	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CTT30_02985	COG1085	galactose-1-phosphate uridylyltransferase
CTT30_02995	COG2017	converts alpha-aldose to the beta-anomer
CTT30_03000	COG1609	Transcriptional regulator
CTT30_03010	COG2211	Major facilitator Superfamily
CTT30_03035	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CTT30_03035	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CTT30_03035	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CTT30_03045	COG2171	N-acyltransferase activity
CTT30_03050	COG0450	alkyl hydroperoxide reductase
CTT30_03055	COG0583	DNA-binding transcription factor activity
CTT30_03060	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CTT30_03085	COG0517	IMP dehydrogenase activity
CTT30_03090	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
CTT30_03100	COG1862	Preprotein translocase
CTT30_03105	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CTT30_03110	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CTT30_03130	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CTT30_03135	COG0826	peptidase U32
CTT30_03150	COG0745	RESPONSE REGULATOR receiver
CTT30_03155	COG5002	protein histidine kinase activity
CTT30_03165	COG0248	Ppx GppA phosphatase
CTT30_03170	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
CTT30_03180	COG0581	inorganic phosphate transmembrane transporter activity
CTT30_03185	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CTT30_03190	COG0704	Plays a role in the regulation of phosphate uptake
CTT30_03210	COG3141	response to X-ray
CTT30_03225	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
CTT30_03230	COG1074	ATP-dependent DNA helicase activity
CTT30_03235	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CTT30_03255	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
CTT30_03260	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CTT30_03265	COG2166	iron-sulfur cluster assembly
CTT30_03280	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
CTT30_03285	COG0124	histidyl-tRNA synthetase
CTT30_03290	COG2976	Protein conserved in bacteria
CTT30_03295	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CTT30_03300	COG1160	GTP binding
CTT30_03305	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CTT30_03320	COG0517	IMP dehydrogenase activity
CTT30_03320	COG0516	GMP reductase activity
CTT30_03335	COG1584	GPR1 FUN34 yaaH family protein
CTT30_03340	COG1115	amino acid carrier protein
CTT30_03350	COG0583	DNA-binding transcription factor activity
CTT30_03365	COG0784	Response regulator, receiver
CTT30_03365	COG0835	chemotaxis
CTT30_03370	COG0204	Acyl-transferase
CTT30_03385	COG0527	aspartate kinase activity
CTT30_03390	COG2203	Gaf domain
CTT30_03390	COG5001	Diguanylate cyclase
CTT30_03390	COG4251	negative regulation of phosphorylation
CTT30_03390	COG3706	GGDEF domain
CTT30_03395	COG3706	GGDEF domain
CTT30_03405	COG2239	Acts as a magnesium transporter
CTT30_03410	COG0189	ligase activity
CTT30_03410	COG4067	protein conserved in archaea
CTT30_03415	COG0189	ligase activity
CTT30_03435	COG2867	negative regulation of translational initiation
CTT30_03440	COG2914	Belongs to the UPF0125 (RnfH) family
CTT30_03445	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CTT30_03450	COG0497	DNA recombination
CTT30_03455	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CTT30_03460	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CTT30_03475	COG0443	Heat shock 70 kDa protein
CTT30_03515	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
CTT30_03525	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
CTT30_03530	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CTT30_03530	COG0047	phosphoribosylformylglycinamidine synthase activity
CTT30_03555	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CTT30_03560	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
CTT30_03565	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CTT30_03570	COG1187	pseudouridine synthase activity
CTT30_03575	COG2840	Smr protein MutS2
CTT30_03600	COG3104	oligopeptide transport
CTT30_03605	COG0367	asparagine synthase
CTT30_03610	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CTT30_03610	COG4651	solute:proton antiporter activity
CTT30_03615	COG1846	Transcriptional regulator
CTT30_03615	COG1940	carbohydrate kinase activity
CTT30_03620	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CTT30_03625	COG1263	PTS System
CTT30_03625	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CTT30_03625	COG2190	(PTS) system
CTT30_03660	COG0330	HflC and HflK could
CTT30_03665	COG3118	belongs to the thioredoxin family
CTT30_03675	COG0300	oxidoreductase activity
CTT30_03680	COG1090	epimerase
CTT30_03705	COG0622	Phosphoesterase
CTT30_03725	COG3710	Transcriptional regulator
CTT30_03730	COG0326	Molecular chaperone. Has ATPase activity
CTT30_03740	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
CTT30_03750	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CTT30_03755	COG1611	Belongs to the LOG family
CTT30_03770	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CTT30_03770	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CTT30_03780	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
CTT30_03795	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CTT30_03800	COG1393	Belongs to the ArsC family
CTT30_03825	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
CTT30_03835	COG0437	4 iron, 4 sulfur cluster binding
CTT30_03840	COG3301	Polysulphide reductase, NrfD
CTT30_03845	COG1138	Cytochrome C-type biogenesis protein
CTT30_03850	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CTT30_03855	COG3088	subunit of a heme lyase
CTT30_03855	COG4235	cytochrome complex assembly
CTT30_03865	COG2837	iron assimilation
CTT30_03870	COG2027	D-alanyl-D-alanine carboxypeptidase
CTT30_03880	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CTT30_03885	COG0739	heme binding
CTT30_03905	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CTT30_03915	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
CTT30_03925	COG1516	flagellar protein fliS
CTT30_03945	COG1677	Flagellar hook-basal body complex protein FliE
CTT30_03955	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CTT30_04005	COG1987	bacterial-type flagellum assembly
CTT30_04010	COG1684	flagellar biosynthetic protein fliR
CTT30_04025	COG2890	protein-(glutamine-N5) methyltransferase activity
CTT30_04030	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CTT30_04040	COG2860	membrane
CTT30_04045	COG3101	peptidyl-lysine hydroxylation
CTT30_04070	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CTT30_04075	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CTT30_04080	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CTT30_04090	COG0101	tRNA pseudouridine synthase activity
CTT30_04095	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
CTT30_04100	COG0285	dihydrofolate synthase activity
CTT30_04105	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
CTT30_04110	COG1286	toxin biosynthetic process
CTT30_04115	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CTT30_04120	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CTT30_04125	COG1121	(ABC) transporter
CTT30_04130	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
CTT30_04135	COG4977	sequence-specific DNA binding
CTT30_04140	COG1918	ferrous iron import across plasma membrane
CTT30_04145	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CTT30_04165	COG3102	Protein conserved in bacteria
CTT30_04170	COG1025	Belongs to the peptidase M16 family
CTT30_04175	COG2062	phosphohistidine phosphatase, SixA
CTT30_04205	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
CTT30_04210	COG0643	Histidine kinase
CTT30_04210	COG0784	Response regulator, receiver
CTT30_04210	COG2198	Histidine kinase
CTT30_04215	COG2201	protein-glutamate methylesterase activity
CTT30_04220	COG1192	Involved in chromosome partitioning
CTT30_04230	COG0835	chemotaxis
CTT30_04240	COG4133	protoheme IX ABC transporter activity
CTT30_04245	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CTT30_04250	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CTT30_04255	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CTT30_04265	COG1138	Cytochrome C-type biogenesis protein
CTT30_04270	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CTT30_04285	COG2853	Lipoprotein
CTT30_04290	COG2067	long-chain fatty acid transport protein
CTT30_04295	COG2067	long-chain fatty acid transport protein
CTT30_04310	COG0183	Belongs to the thiolase family
CTT30_04320	COG0778	Nitroreductase
CTT30_04325	COG0583	DNA-binding transcription factor activity
CTT30_04330	COG0745	RESPONSE REGULATOR receiver
CTT30_04340	COG2832	Protein of unknown function (DUF454)
CTT30_04345	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CTT30_04360	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CTT30_04365	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CTT30_04390	COG1653	transport
CTT30_04395	COG1175	transmembrane transport
CTT30_04405	COG3842	ATPase activity
CTT30_04410	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CTT30_04415	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
CTT30_04420	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CTT30_04430	COG2204	response regulator
CTT30_04450	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CTT30_04455	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CTT30_04460	COG0776	regulation of translation
CTT30_04465	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CTT30_04470	COG1555	photosystem II stabilization
CTT30_04475	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
CTT30_04480	COG0539	negative regulation of cytoplasmic translation
CTT30_04490	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
CTT30_04495	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
CTT30_04500	COG0284	orotidine-5'-phosphate decarboxylase activity
CTT30_04530	COG4120	Belongs to the binding-protein-dependent transport system permease family
CTT30_04540	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CTT30_04555	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CTT30_04560	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CTT30_04565	COG0252	asparaginase activity
CTT30_04570	COG0616	signal peptide processing
CTT30_04575	COG1902	pentaerythritol trinitrate reductase activity
CTT30_04575	COG0446	pyridine nucleotide-disulphide oxidoreductase
CTT30_04580	COG0788	formyltetrahydrofolate deformylase activity
CTT30_04590	COG1199	ATP-dependent helicase activity
CTT30_04595	COG1214	PFAM Peptidase M22, glycoprotease
CTT30_04610	COG0596	Alpha beta hydrolase
CTT30_04615	COG0318	PFAM AMP-dependent synthetase and ligase
CTT30_04620	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
CTT30_04625	COG0659	secondary active sulfate transmembrane transporter activity
CTT30_04630	COG1530	ribonuclease E activity
CTT30_04635	COG0564	pseudouridine synthase activity
CTT30_04645	COG1399	metal-binding, possibly nucleic acid-binding protein
CTT30_04650	COG0333	Belongs to the bacterial ribosomal protein bL32 family
CTT30_04660	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CTT30_04685	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CTT30_04690	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CTT30_04695	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CTT30_04700	COG0470	DNA polymerase III
CTT30_04705	COG0084	hydrolase, TatD family'
CTT30_04710	COG1263	PTS System
CTT30_04710	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CTT30_04725	COG0733	neurotransmitter:sodium symporter activity
CTT30_04740	COG4667	esterase of the alpha-beta hydrolase superfamily
CTT30_04745	COG0702	epimerase
CTT30_04765	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
CTT30_04770	COG0840	transmembrane signaling receptor activity
CTT30_04775	COG0632	four-way junction helicase activity
CTT30_04780	COG2255	four-way junction helicase activity
CTT30_04785	COG1271	oxidase subunit
CTT30_04790	COG1294	oxidase, subunit
CTT30_04795	COG4890	Cyd operon protein YbgT
CTT30_04805	COG0824	Thioesterase
CTT30_04810	COG0811	peptide transport
CTT30_04825	COG0823	Involved in the tonB-independent uptake of proteins
CTT30_04830	COG2885	chlorophyll binding
CTT30_04835	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
CTT30_04840	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
CTT30_04855	COG0784	Response regulator, receiver
CTT30_04855	COG2205	protein histidine kinase activity
CTT30_04870	COG1401	restriction endodeoxyribonuclease activity
CTT30_04890	COG1902	pentaerythritol trinitrate reductase activity
CTT30_04895	COG1881	PFAM PEBP family protein
CTT30_04910	COG1940	carbohydrate kinase activity
CTT30_04930	COG1960	acyl-CoA dehydrogenase activity
CTT30_04935	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
CTT30_04945	COG0708	Exodeoxyribonuclease III
CTT30_04950	COG0840	transmembrane signaling receptor activity
CTT30_04955	COG2850	peptidyl-arginine hydroxylation
CTT30_04970	COG0730	response to heat
CTT30_04975	COG1199	ATP-dependent helicase activity
CTT30_04990	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CTT30_05000	COG0156	8-amino-7-oxononanoate synthase activity
CTT30_05005	COG1073	alpha beta
CTT30_05005	COG2226	methyltransferase
CTT30_05010	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CTT30_05020	COG0501	Belongs to the peptidase M48B family
CTT30_05030	COG1028	Short-chain dehydrogenase reductase Sdr
CTT30_05045	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CTT30_05055	COG2268	Band 7 protein
CTT30_05065	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CTT30_05075	COG0482	sulfurtransferase activity
CTT30_05085	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CTT30_05095	COG1757	Na H antiporter
CTT30_05105	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CTT30_05115	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CTT30_05115	COG0131	Imidazoleglycerol-phosphate dehydratase
CTT30_05120	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CTT30_05125	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
CTT30_05135	COG0140	phosphoribosyl-ATP diphosphatase activity
CTT30_05135	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CTT30_05140	COG2199	diguanylate cyclase activity
CTT30_05140	COG2200	EAL domain
CTT30_05140	COG2202	Pas domain
CTT30_05145	COG0784	Response regulator, receiver
CTT30_05145	COG2205	protein histidine kinase activity
CTT30_05165	COG1227	inorganic diphosphatase activity
CTT30_05175	COG4172	Belongs to the ABC transporter superfamily
CTT30_05185	COG4171	peptide transport system, permease
CTT30_05200	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CTT30_05205	COG1842	Phage shock protein A
CTT30_05235	COG2818	Glycosylase
CTT30_05245	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
CTT30_05250	COG0626	cystathionine gamma-synthase activity
CTT30_05260	COG0733	neurotransmitter:sodium symporter activity
CTT30_05265	COG0564	pseudouridine synthase activity
CTT30_05270	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CTT30_05275	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CTT30_05280	COG4136	ATPase activity
CTT30_05285	COG4135	transport system, permease component
CTT30_05290	COG4134	Bacterial extracellular solute-binding protein
CTT30_05300	COG3313	Fe-S protein
CTT30_05315	COG2350	Protein conserved in bacteria
CTT30_05350	COG0776	regulation of translation
CTT30_05360	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CTT30_05370	COG0417	DNA replication proofreading
CTT30_05385	COG2197	response regulator
CTT30_05390	COG0322	excinuclease ABC activity
CTT30_05420	COG1902	pentaerythritol trinitrate reductase activity
CTT30_05430	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
CTT30_05440	COG1032	radical SAM domain protein
CTT30_05465	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CTT30_05475	COG1764	response to oxidative stress
CTT30_05480	COG1846	Transcriptional regulator
CTT30_05490	COG0583	DNA-binding transcription factor activity
CTT30_05515	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CTT30_05565	COG0443	Heat shock 70 kDa protein
CTT30_05605	COG1643	Atp-dependent helicase
CTT30_05620	COG0159	tryptophan synthase activity
CTT30_05630	COG0135	phosphoribosylanthranilate isomerase activity
CTT30_05630	COG0134	indole-3-glycerol-phosphate synthase activity
CTT30_05635	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CTT30_05640	COG0512	Glutamine amidotransferase of anthranilate synthase
CTT30_05645	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CTT30_05655	COG0613	PHP domain protein
CTT30_05660	COG0009	L-threonylcarbamoyladenylate synthase
CTT30_05675	COG1187	pseudouridine synthase activity
CTT30_05680	COG0384	phenazine biosynthesis protein PhzF
CTT30_05685	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CTT30_05690	COG4988	ABC transporter
CTT30_05695	COG0492	ferredoxin-NADP+ reductase activity
CTT30_05710	COG0612	Peptidase, M16
CTT30_05720	COG2949	membrane
CTT30_05730	COG0281	malic enzyme
CTT30_05735	COG1643	Atp-dependent helicase
CTT30_05750	COG1448	Aminotransferase
CTT30_05755	COG2770	Histidine kinase
CTT30_05755	COG3437	response regulator, receiver
CTT30_05765	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CTT30_05775	COG0017	Asparaginyl-tRNA synthetase
CTT30_05780	COG0840	transmembrane signaling receptor activity
CTT30_05785	COG0720	synthase
CTT30_05790	COG0814	amino acid
CTT30_05800	COG1760	l-serine dehydratase
CTT30_05805	COG0814	amino acid
CTT30_05810	COG0494	nUDIX hydrolase
CTT30_05825	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CTT30_05840	COG3106	COG3106 Predicted ATPase
CTT30_05855	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CTT30_05885	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CTT30_05910	COG2989	Protein conserved in bacteria
CTT30_05915	COG3108	Peptidase M15
CTT30_05920	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CTT30_05935	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
CTT30_05965	COG0783	Belongs to the Dps family
CTT30_05975	COG0531	amino acid
CTT30_05980	COG2962	Rard protein
CTT30_06000	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CTT30_06010	COG1942	4-Oxalocrotonate Tautomerase
CTT30_06105	COG0346	lactoylglutathione lyase activity
CTT30_06275	COG0251	oxidation-reduction process
CTT30_06310	COG1028	Short-chain dehydrogenase reductase Sdr
CTT30_06375	COG4628	conserved protein (DUF2132)
CTT30_06590	COG3385	transposase activity
CTT30_06730	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CTT30_06775	COG3755	Protein conserved in bacteria
CTT30_06805	COG0384	phenazine biosynthesis protein PhzF
CTT30_06860	COG3385	transposase activity
CTT30_06880	COG1280	lysine exporter protein (LysE YggA)
CTT30_06885	COG2161	toxin-antitoxin pair type II binding
CTT30_06890	COG4115	mRNA cleavage
CTT30_06900	COG0384	phenazine biosynthesis protein PhzF
CTT30_06985	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
CTT30_06995	COG0625	glutathione transferase activity
CTT30_07010	COG2885	chlorophyll binding
CTT30_07025	COG0247	lactate metabolic process
CTT30_07025	COG0277	FAD linked oxidase domain protein
CTT30_07040	COG2986	histidine ammonia-lyase
CTT30_07050	COG0010	Belongs to the arginase family
CTT30_07055	COG1228	amidohydrolase
CTT30_07060	COG2188	Transcriptional regulator
CTT30_07065	COG4326	sporulation control protein
CTT30_07085	COG0500	methyltransferase
CTT30_07090	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
CTT30_07100	COG0295	cytidine deaminase activity
CTT30_07105	COG1346	cytolysis
CTT30_07110	COG1380	Effector of murein hydrolase LrgA
CTT30_07115	COG2925	Exonuclease
CTT30_07120	COG1823	symporter activity
CTT30_07125	COG0702	epimerase
CTT30_07130	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CTT30_07135	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
CTT30_07140	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
CTT30_07160	COG4139	cobalamin transport
CTT30_07165	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
CTT30_07190	COG0583	DNA-binding transcription factor activity
CTT30_07195	COG1119	ATPase activity
CTT30_07205	COG2205	protein histidine kinase activity
CTT30_07205	COG0784	Response regulator, receiver
CTT30_07215	COG1451	nucleotide metabolic process
CTT30_07240	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
CTT30_07255	COG2200	EAL domain
CTT30_07270	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CTT30_07295	COG0515	serine threonine protein kinase
CTT30_07410	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
CTT30_07415	COG0372	Belongs to the citrate synthase family
CTT30_07425	COG2828	Protein conserved in bacteria
CTT30_07445	COG0561	phosphatase activity
CTT30_07450	COG0602	queuosine metabolic process
CTT30_07490	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CTT30_07495	COG0840	transmembrane signaling receptor activity
CTT30_07500	COG1254	Belongs to the acylphosphatase family
CTT30_07505	COG2920	part of a sulfur-relay system
CTT30_07510	COG0670	Belongs to the BI1 family
CTT30_07515	COG1126	abc transporter atp-binding protein
CTT30_07520	COG0765	amino acid transport
CTT30_07525	COG4597	amino acid ABC transporter
CTT30_07530	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CTT30_07535	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CTT30_07535	COG1648	precorrin-2 dehydrogenase activity
CTT30_07545	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CTT30_07550	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CTT30_07570	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CTT30_07570	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
CTT30_07575	COG3008	intermembrane lipid transfer
CTT30_07580	COG2995	paraquat-inducible protein a
CTT30_07585	COG1132	(ABC) transporter
CTT30_07590	COG1956	GAF domain-containing protein
CTT30_07595	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
CTT30_07610	COG0308	aminopeptidase N
CTT30_07625	COG0167	dihydroorotate dehydrogenase activity
CTT30_07635	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CTT30_07635	COG0116	Belongs to the methyltransferase superfamily
CTT30_07645	COG0488	(ABC) transporter
CTT30_07660	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CTT30_07665	COG1067	ATP-dependent peptidase activity
CTT30_07670	COG3120	sequence-specific DNA binding
CTT30_07715	COG0840	transmembrane signaling receptor activity
CTT30_07720	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CTT30_07855	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CTT30_07870	COG3278	Belongs to the heme-copper respiratory oxidase family
CTT30_07885	COG2010	Cytochrome c
CTT30_07895	COG2217	Heavy metal translocating P-type atpase
CTT30_07910	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CTT30_07915	COG0589	response to stress
CTT30_07940	COG3842	ATPase activity
CTT30_07950	COG1177	transmembrane transport
CTT30_07955	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CTT30_07965	COG2199	diguanylate cyclase activity
CTT30_07970	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CTT30_07985	COG0583	DNA-binding transcription factor activity
CTT30_08000	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
CTT30_08040	COG0488	(ABC) transporter
CTT30_08050	COG1595	DNA-templated transcription, initiation
CTT30_08060	COG1910	domain protein
CTT30_08065	COG0746	molybdenum cofactor guanylyltransferase activity
CTT30_08070	COG1763	Mo-molybdopterin cofactor biosynthetic process
CTT30_08100	COG1940	carbohydrate kinase activity
CTT30_08105	COG3148	PFAM DTW domain containing protein
CTT30_08115	COG3290	protein histidine kinase activity
CTT30_08115	COG0840	transmembrane signaling receptor activity
CTT30_08120	COG0791	NLP P60 protein
CTT30_08130	COG3001	Fructosamine kinase
CTT30_08140	COG0307	riboflavin synthase, alpha
CTT30_08145	COG0534	Mate efflux family protein
CTT30_08190	COG2204	response regulator
CTT30_08200	COG0438	transferase activity, transferring glycosyl groups
CTT30_08235	COG0297	glycogen (starch) synthase activity
CTT30_08245	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CTT30_08265	COG1196	nuclear chromosome segregation
CTT30_08280	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
CTT30_08325	COG3293	Transposase
CTT30_08350	COG4774	siderophore transport
CTT30_08370	COG4615	Cyclic peptide transporter
CTT30_08380	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CTT30_08385	COG1120	ATPase activity
CTT30_08390	COG2977	Belongs to the P-Pant transferase superfamily
CTT30_08395	COG1929	Belongs to the glycerate kinase type-1 family
CTT30_08400	COG3835	regulator
CTT30_08405	COG0583	DNA-binding transcription factor activity
CTT30_08415	COG3385	transposase activity
CTT30_08420	COG3713	MltA-interacting MipA family protein
CTT30_08425	COG2205	protein histidine kinase activity
CTT30_08430	COG0745	RESPONSE REGULATOR receiver
CTT30_08450	COG2116	formate transmembrane transporter activity
CTT30_08460	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CTT30_08465	COG2199	diguanylate cyclase activity
CTT30_08470	COG2195	Cleaves the N-terminal amino acid of tripeptides
CTT30_08500	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CTT30_08505	COG0454	-acetyltransferase
CTT30_08550	COG3122	Protein conserved in bacteria
CTT30_08570	COG4565	transcriptional regulatory protein
CTT30_08575	COG3290	protein histidine kinase activity
CTT30_08595	COG0848	biopolymer transport protein
CTT30_08600	COG0811	peptide transport
CTT30_08605	COG0811	peptide transport
CTT30_08640	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CTT30_08645	COG1328	CTP reductase activity
CTT30_08650	COG0840	transmembrane signaling receptor activity
CTT30_08660	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CTT30_08670	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CTT30_08675	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CTT30_08680	COG0633	Ferredoxin
CTT30_08705	COG0019	diaminopimelate decarboxylase activity
CTT30_08730	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
CTT30_08740	COG0577	efflux transmembrane transporter activity
CTT30_08745	COG1136	(ABC) transporter
CTT30_08750	COG0534	Mate efflux family protein
CTT30_08755	COG0702	epimerase
CTT30_08765	COG2814	Major facilitator Superfamily
CTT30_08775	COG1061	Type III restriction enzyme res subunit
CTT30_08815	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CTT30_08820	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CTT30_08840	COG0463	Glycosyl transferase, family 2
CTT30_08890	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CTT30_08935	COG0242	peptide deformylase activity
CTT30_08940	COG0519	Catalyzes the synthesis of GMP from XMP
CTT30_08950	COG4580	involved in the transport of maltose and maltodextrins
CTT30_08955	COG3040	lipid binding
CTT30_08965	COG2824	Alkylphosphonate utilization operon protein PhnA
CTT30_09020	COG1115	amino acid carrier protein
CTT30_09025	COG1280	lysine exporter protein (LysE YggA)
CTT30_09030	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
CTT30_09035	COG0352	thiamine-phosphate diphosphorylase activity
CTT30_09050	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CTT30_09060	COG1012	belongs to the aldehyde dehydrogenase family
CTT30_09070	COG0583	DNA-binding transcription factor activity
CTT30_09090	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CTT30_09100	COG1609	Transcriptional regulator
CTT30_09105	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CTT30_09115	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
CTT30_09115	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CTT30_09130	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CTT30_09135	COG1609	Transcriptional regulator
CTT30_09150	COG1278	Cold shock
CTT30_09175	COG1538	Outer membrane efflux protein
CTT30_09180	COG1858	cytochrome C peroxidase
CTT30_09185	COG0784	Response regulator, receiver
CTT30_09185	COG2205	protein histidine kinase activity
CTT30_09205	COG0277	FAD linked oxidase domain protein
CTT30_09210	COG0583	DNA-binding transcription factor activity
CTT30_09230	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CTT30_09270	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CTT30_09270	COG0072	phenylalanine-tRNA ligase activity
CTT30_09300	COG2133	pyrroloquinoline quinone binding
CTT30_09310	COG4191	Histidine kinase
CTT30_09325	COG3070	regulator of competence-specific genes
CTT30_09335	COG2431	L-lysine efflux transmembrane transporter activity
CTT30_09345	COG0076	glutamate decarboxylase activity
CTT30_09350	COG1737	Transcriptional regulator
CTT30_09355	COG1454	alcohol dehydrogenase
CTT30_09355	COG1012	belongs to the aldehyde dehydrogenase family
CTT30_09360	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CTT30_09395	COG1882	Formate acetyltransferase
CTT30_09410	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CTT30_09420	COG3013	Belongs to the UPF0304 family
CTT30_09425	COG2766	serine protein kinase
CTT30_09430	COG2718	Belongs to the UPF0229 family
CTT30_09435	COG2719	SpoVR family
CTT30_09440	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
CTT30_09445	COG2835	tetraacyldisaccharide 4'-kinase activity
CTT30_09455	COG1132	(ABC) transporter
CTT30_09460	COG0658	competence protein
CTT30_09460	COG2333	competence protein COMEC
CTT30_09470	COG4591	ABC-type transport system involved in lipoprotein release permease component
CTT30_09475	COG1136	(ABC) transporter
CTT30_09480	COG4591	ABC-type transport system involved in lipoprotein release permease component
CTT30_09490	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CTT30_09505	COG1252	NADH dehydrogenase
CTT30_09510	COG3150	esterase
CTT30_09535	COG0537	adenosine 5'-monophosphoramidase activity
CTT30_09550	COG2186	Transcriptional regulator
CTT30_09560	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
CTT30_09570	COG1674	ftsk spoiiie
CTT30_09580	COG0686	Belongs to the AlaDH PNT family
CTT30_09585	COG3092	negative regulation of chromosome organization
CTT30_09590	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CTT30_09595	COG0857	belongs to the CobB CobQ family
CTT30_09595	COG0280	phosphate acetyltransferase
CTT30_09600	COG0435	Glutathione S-transferase
CTT30_09610	COG0444	Belongs to the ABC transporter superfamily
CTT30_09615	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CTT30_09620	COG0601	transmembrane transport
CTT30_09635	COG2067	long-chain fatty acid transport protein
CTT30_09645	COG0840	transmembrane signaling receptor activity
CTT30_09655	COG1404	Belongs to the peptidase S8 family
CTT30_09660	COG0840	transmembrane signaling receptor activity
CTT30_09685	COG0577	efflux transmembrane transporter activity
CTT30_09685	COG1136	(ABC) transporter
CTT30_09695	COG0577	efflux transmembrane transporter activity
CTT30_09705	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CTT30_09720	COG1770	oligopeptidase
CTT30_09815	COG3706	GGDEF domain
CTT30_09830	COG3126	Type III secretion system lipoprotein chaperone (YscW)
CTT30_09835	COG1946	Acyl-CoA thioesterase
CTT30_09840	COG1522	sequence-specific DNA binding
CTT30_09865	COG0477	Major facilitator Superfamily
CTT30_09870	COG2855	membrane
CTT30_09895	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
CTT30_09900	COG1169	isochorismate synthase
CTT30_09905	COG0436	Aminotransferase
CTT30_09910	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
CTT30_09915	COG0232	Belongs to the dGTPase family. Type 2 subfamily
CTT30_09920	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CTT30_09935	COG0513	Belongs to the DEAD box helicase family
CTT30_09945	COG0616	signal peptide processing
CTT30_09950	COG1028	Short-chain dehydrogenase reductase Sdr
CTT30_09955	COG0469	pyruvate kinase activity
CTT30_09960	COG1940	carbohydrate kinase activity
CTT30_09965	COG0784	Response regulator, receiver
CTT30_09965	COG0835	chemotaxis
CTT30_09980	COG0243	molybdopterin cofactor binding
CTT30_09985	COG3005	denitrification pathway
CTT30_09990	COG4459	periplasmic nitrate reductase
CTT30_09995	COG0390	transport system, permease component
CTT30_10000	COG2116	formate transmembrane transporter activity
CTT30_10025	COG0542	response to heat
CTT30_10035	COG1278	Cold shock
CTT30_10045	COG1187	pseudouridine synthase activity
CTT30_10055	COG1801	Protein of unknown function DUF72
CTT30_10065	COG0500	methyltransferase
CTT30_10070	COG4067	protein conserved in archaea
CTT30_10070	COG0189	ligase activity
CTT30_10085	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
CTT30_10090	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
CTT30_10100	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CTT30_10105	COG1434	Gram-negative-bacterium-type cell wall biogenesis
CTT30_10110	COG0745	RESPONSE REGULATOR receiver
CTT30_10125	COG3070	regulator of competence-specific genes
CTT30_10130	COG3385	transposase activity
CTT30_10150	COG0297	glycogen (starch) synthase activity
CTT30_10155	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CTT30_10160	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CTT30_10180	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
CTT30_10185	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
CTT30_10190	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CTT30_10195	COG1435	thymidine kinase activity
CTT30_10200	COG0215	cysteine-tRNA ligase activity
CTT30_10205	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CTT30_10210	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CTT30_10215	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
CTT30_10220	COG3012	SEC-C Motif Domain Protein
CTT30_10225	COG3139	Protein of unknown function (DUF1315)
CTT30_10235	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CTT30_10250	COG2226	methyltransferase
CTT30_10265	COG1785	Belongs to the alkaline phosphatase family
CTT30_10270	COG2771	luxR family
CTT30_10280	COG2814	Major facilitator Superfamily
CTT30_10285	COG1028	Short-chain dehydrogenase reductase Sdr
CTT30_10310	COG2951	lytic endotransglycosylase activity
CTT30_10315	COG3100	YcgL domain-containing protein
CTT30_10320	COG0850	regulation of cytokinetic process
CTT30_10325	COG2894	cell division
CTT30_10330	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
CTT30_10335	COG1454	alcohol dehydrogenase
CTT30_10335	COG1012	belongs to the aldehyde dehydrogenase family
CTT30_10340	COG2095	MarC family integral membrane protein
CTT30_10345	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CTT30_10350	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CTT30_10355	COG1757	Na H antiporter
CTT30_10360	COG2188	Transcriptional regulator
CTT30_10365	COG1263	PTS System
CTT30_10365	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CTT30_10370	COG1621	beta-fructofuranosidase activity
CTT30_10380	COG3081	Nucleoid-associated protein
CTT30_10385	COG3082	Protein of unknown function (DUF1414)
CTT30_10390	COG3083	sulfuric ester hydrolase activity
CTT30_10415	COG0123	including yeast histone deacetylase and acetoin utilization protein
CTT30_10425	COG1881	PFAM PEBP family protein
CTT30_10435	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CTT30_10440	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CTT30_10460	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CTT30_10465	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
CTT30_10505	COG0383	alpha-mannosidase activity
CTT30_10525	COG1940	carbohydrate kinase activity
CTT30_10530	COG2982	Protein involved in outer membrane biogenesis
CTT30_10535	COG0572	uridine kinase
CTT30_10540	COG0489	protein tyrosine kinase activity
CTT30_10545	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CTT30_10545	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CTT30_10575	COG0517	IMP dehydrogenase activity
CTT30_10575	COG0617	tRNA 3'-terminal CCA addition
CTT30_10575	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
CTT30_10585	COG3706	GGDEF domain
CTT30_10590	COG0314	molybdopterin synthase activity
CTT30_10595	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
CTT30_10600	COG0315	cyclic pyranopterin monophosphate synthase activity
CTT30_10605	COG0521	Mo-molybdopterin cofactor biosynthetic process
CTT30_10610	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CTT30_10615	COG0391	Required for morphogenesis under gluconeogenic growth conditions
CTT30_10620	COG2198	Histidine kinase
CTT30_10630	COG0556	nucleotide-excision repair
CTT30_10670	COG0739	heme binding
CTT30_10735	COG1987	bacterial-type flagellum assembly
CTT30_10760	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CTT30_10765	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
CTT30_10770	COG1516	flagellar protein fliS
CTT30_10785	COG1580	Controls the rotational direction of flagella during chemotaxis
CTT30_10790	COG1191	sigma factor activity
CTT30_10795	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CTT30_10800	COG1360	Flagellar Motor Protein
CTT30_10830	COG1706	bacterial-type flagellum-dependent cell motility
CTT30_10835	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
CTT30_10840	COG4786	Flagellar basal body rod
CTT30_10845	COG4787	bacterial-type flagellum-dependent cell motility
CTT30_10850	COG1749	Flagellar hook protein flgE
CTT30_10855	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
CTT30_10860	COG1558	bacterial-type flagellum-dependent cell motility
CTT30_10865	COG1815	bacterial-type flagellum-dependent cell motility
CTT30_10885	COG1388	LysM domain
CTT30_10885	COG0741	lytic transglycosylase activity
CTT30_10890	COG4657	Part of a membrane complex involved in electron transport
CTT30_10900	COG4656	Part of a membrane complex involved in electron transport
CTT30_10905	COG4658	electron transport chain
CTT30_10910	COG4659	FMN binding
CTT30_10915	COG4660	Part of a membrane complex involved in electron transport
CTT30_10920	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CTT30_10925	COG0346	lactoylglutathione lyase activity
CTT30_10945	COG2056	Na+-H+ antiporter family
CTT30_10950	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
CTT30_10960	COG2716	regulation of RNA biosynthetic process
CTT30_10965	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CTT30_10985	COG4783	chaperone-mediated protein folding
CTT30_10990	COG1393	Belongs to the ArsC family
CTT30_11010	COG2233	PERMEase
CTT30_11015	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CTT30_11025	COG2877	3-deoxy-8-phosphooctulonate synthase activity
CTT30_11030	COG2912	Transglutaminase-like superfamily
CTT30_11040	COG2890	protein-(glutamine-N5) methyltransferase activity
CTT30_11045	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CTT30_11060	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
CTT30_11065	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CTT30_11195	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CTT30_11205	COG1705	Flagellar rod assembly protein muramidase FlgJ
CTT30_11205	COG3951	Flagellar rod assembly protein muramidase FlgJ
CTT30_11210	COG1706	bacterial-type flagellum-dependent cell motility
CTT30_11215	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
CTT30_11225	COG4787	bacterial-type flagellum-dependent cell motility
CTT30_11245	COG1815	bacterial-type flagellum-dependent cell motility
CTT30_11250	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CTT30_11255	COG0835	chemotaxis
CTT30_11255	COG0784	Response regulator, receiver
CTT30_11265	COG2747	anti-sigma28 factor FlgM
CTT30_11295	COG0500	methyltransferase
CTT30_11320	COG2608	mercury ion transmembrane transporter activity
CTT30_11320	COG2217	Heavy metal translocating P-type atpase
CTT30_11330	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
CTT30_11345	COG0583	DNA-binding transcription factor activity
CTT30_11350	COG0301	tRNA thio-modification
CTT30_11350	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CTT30_11360	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CTT30_11365	COG1722	exodeoxyribonuclease VII activity
CTT30_11370	COG0142	geranyltranstransferase activity
CTT30_11380	COG0564	pseudouridine synthase activity
CTT30_11385	COG3098	single-species biofilm formation
CTT30_11400	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CTT30_11420	COG0508	dehydrogenase complex catalyzes the overall conversion of
CTT30_11425	COG0567	Dehydrogenase, E1 component
CTT30_11435	COG1053	succinate dehydrogenase
CTT30_11440	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
CTT30_11455	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CTT30_11465	COG0033	Phosphoglucomutase
CTT30_11470	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
CTT30_11475	COG0596	Alpha beta hydrolase
CTT30_11485	COG0716	FMN binding
CTT30_11490	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CTT30_11495	COG3115	cell septum assembly
CTT30_11500	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
CTT30_11505	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CTT30_11510	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CTT30_11515	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CTT30_11520	COG2190	(PTS) system
CTT30_11525	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CTT30_11530	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CTT30_11535	COG1702	phosphate starvation-inducible protein PhoH
CTT30_11540	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CTT30_11545	COG4535	Mg2 and Co2 transporter CorC
CTT30_11550	COG0815	Transfers the fatty acyl group on membrane lipoproteins
CTT30_11555	COG2888	peptidyl-tyrosine sulfation
CTT30_11560	COG0495	leucyl-tRNA aminoacylation
CTT30_11565	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
CTT30_11570	COG1466	dna polymerase III delta subunit
CTT30_11575	COG0799	negative regulation of ribosome biogenesis
CTT30_11580	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CTT30_11585	COG0768	penicillin binding
CTT30_11590	COG0772	Belongs to the SEDS family
CTT30_11595	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CTT30_11600	COG1686	Belongs to the peptidase S11 family
CTT30_11605	COG2921	Belongs to the UPF0250 family
CTT30_11615	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
CTT30_11630	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CTT30_11640	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CTT30_11645	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CTT30_11670	COG0366	Alpha amylase catalytic
CTT30_11675	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CTT30_11675	COG1263	PTS System
CTT30_11680	COG1609	Transcriptional regulator
CTT30_11690	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CTT30_11695	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CTT30_11700	COG2011	ABC-type metal ion transport system permease component
CTT30_11705	COG1464	Belongs to the NlpA lipoprotein family
CTT30_11715	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
CTT30_11725	COG0254	rRNA binding
CTT30_11730	COG1720	tRNA m6t6A37 methyltransferase activity
CTT30_11740	COG0121	glutamine amidotransferase
CTT30_11745	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
CTT30_11750	COG1960	acyl-CoA dehydrogenase activity
CTT30_11765	COG0328	RNA-DNA hybrid ribonuclease activity
CTT30_11770	COG2226	methyltransferase
CTT30_11775	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CTT30_11780	COG1388	LysM domain
CTT30_11780	COG0741	lytic transglycosylase activity
CTT30_11790	COG3021	interspecies interaction between organisms
CTT30_11795	COG0347	Belongs to the P(II) protein family
CTT30_11810	COG0825	malonyl-CoA metabolic process
CTT30_11815	COG0587	DNA-directed DNA polymerase activity
CTT30_11820	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CTT30_11825	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CTT30_11835	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CTT30_11840	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CTT30_11845	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
CTT30_11850	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CTT30_11855	COG0750	zinc metalloprotease
CTT30_11865	COG0575	Belongs to the CDS family
CTT30_11870	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CTT30_11875	COG0233	cytoplasmic translational termination
CTT30_11880	COG0528	UMP kinase activity
CTT30_11890	COG0052	Belongs to the universal ribosomal protein uS2 family
CTT30_11895	COG0024	Methionine aminopeptidase
CTT30_11900	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
CTT30_11910	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CTT30_11915	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
CTT30_11920	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CTT30_11940	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CTT30_11940	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CTT30_11945	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CTT30_11950	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CTT30_11955	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CTT30_11965	COG1073	alpha beta
CTT30_11970	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
CTT30_11975	COG2252	PERMEase
CTT30_11980	COG2195	Cleaves the N-terminal amino acid of tripeptides
CTT30_11985	COG4067	protein conserved in archaea
CTT30_11985	COG0189	ligase activity
CTT30_11990	COG0189	ligase activity
CTT30_12000	COG0733	neurotransmitter:sodium symporter activity
CTT30_12015	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CTT30_12020	COG0514	ATP-dependent DNA helicase (RecQ)
CTT30_12025	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CTT30_12040	COG1477	protein flavinylation
CTT30_12045	COG2871	sodium ion transport
CTT30_12050	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
CTT30_12055	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
CTT30_12065	COG1805	sodium ion transport
CTT30_12070	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
CTT30_12075	COG0271	Belongs to the BolA IbaG family
CTT30_12080	COG2813	Specifically methylates the guanine in position
CTT30_12110	COG1595	DNA-templated transcription, initiation
CTT30_12125	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CTT30_12130	COG0693	protein deglycase activity
CTT30_12135	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CTT30_12140	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CTT30_12150	COG0560	Phosphoserine phosphatase
CTT30_12160	COG0813	purine-nucleoside phosphorylase activity
CTT30_12165	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
CTT30_12170	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
CTT30_12185	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CTT30_12190	COG0084	hydrolase, TatD family'
CTT30_12195	COG3022	response to hydroperoxide
CTT30_12200	COG1115	amino acid carrier protein
CTT30_12215	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CTT30_12225	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
CTT30_12230	COG0583	DNA-binding transcription factor activity
CTT30_12235	COG0730	response to heat
CTT30_12240	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CTT30_12245	COG0505	Belongs to the CarA family
CTT30_12260	COG0494	nUDIX hydrolase
CTT30_12265	COG0653	protein targeting
CTT30_12270	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
CTT30_12275	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CTT30_12280	COG0849	cell division
CTT30_12285	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CTT30_12300	COG0772	Belongs to the SEDS family
CTT30_12305	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CTT30_12315	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CTT30_12320	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CTT30_12325	COG0768	penicillin binding
CTT30_12330	COG3116	cell division
CTT30_12345	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CTT30_12350	COG3107	peptidoglycan biosynthetic process
CTT30_12355	COG0792	nuclease activity
CTT30_12360	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
CTT30_12370	COG2969	positive regulation of protein catabolic process
CTT30_12375	COG0625	glutathione transferase activity
CTT30_12380	COG2857	Cytochrome c1
CTT30_12385	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CTT30_12390	COG0723	plastoquinol--plastocyanin reductase activity
CTT30_12405	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CTT30_12410	COG3105	Protein conserved in bacteria
CTT30_12415	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CTT30_12420	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CTT30_12435	COG3150	esterase
CTT30_12445	COG3151	Protein conserved in bacteria
CTT30_12450	COG0494	nUDIX hydrolase
CTT30_12455	COG1538	Outer membrane efflux protein
CTT30_12465	COG0784	Response regulator, receiver
CTT30_12465	COG2198	Histidine kinase
CTT30_12465	COG5002	protein histidine kinase activity
CTT30_12470	COG2203	Gaf domain
CTT30_12470	COG3706	GGDEF domain
CTT30_12470	COG5001	Diguanylate cyclase
CTT30_12470	COG4251	negative regulation of phosphorylation
CTT30_12475	COG1242	4 iron, 4 sulfur cluster binding
CTT30_12480	COG0070	glutamate synthase
CTT30_12480	COG0069	glutamate synthase activity
CTT30_12480	COG0067	glutamate synthase
CTT30_12490	COG0069	glutamate synthase activity
CTT30_12490	COG0070	glutamate synthase
CTT30_12490	COG0067	glutamate synthase
CTT30_12495	COG0493	'glutamate synthase
CTT30_12520	COG0195	Participates in both transcription termination and antitermination
CTT30_12525	COG0779	Required for maturation of 30S ribosomal subunits
CTT30_12615	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CTT30_12620	COG3153	acetyltransferase
CTT30_12625	COG3154	lipid carrier protein
CTT30_12635	COG0826	peptidase U32
CTT30_12640	COG0826	peptidase U32
CTT30_12645	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
CTT30_12665	COG0513	Belongs to the DEAD box helicase family
CTT30_12680	COG0456	acetyltransferase
CTT30_12690	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CTT30_12695	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CTT30_12700	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CTT30_12705	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
CTT30_12710	COG1534	Rna-binding protein
CTT30_12715	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CTT30_12720	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CTT30_12735	COG0316	Belongs to the HesB IscA family
CTT30_12750	COG0628	permease
CTT30_12755	COG2813	Specifically methylates the guanine in position
CTT30_12760	COG0784	Response regulator, receiver
CTT30_12760	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CTT30_12760	COG2198	Histidine kinase
CTT30_12760	COG2205	protein histidine kinase activity
CTT30_12765	COG0747	negative chemotaxis
CTT30_12780	COG0444	Belongs to the ABC transporter superfamily
CTT30_12785	COG4608	Belongs to the ABC transporter superfamily
CTT30_12795	COG2971	BadF BadG BcrA BcrD
CTT30_12810	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CTT30_12815	COG3842	ATPase activity
CTT30_12825	COG1840	ABC-type Fe3 transport system, periplasmic component
CTT30_12830	COG0004	ammonium transporteR
CTT30_12840	COG3112	Uncharacterised protein family (UPF0231)
CTT30_12845	COG1049	propionate catabolic process, 2-methylcitrate cycle
CTT30_12850	COG1752	Esterase of the alpha-beta hydrolase superfamily
CTT30_12855	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CTT30_12935	COG3119	arylsulfatase activity
CTT30_12940	COG1309	transcriptional regulator
CTT30_12970	COG1643	Atp-dependent helicase
CTT30_12980	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CTT30_12995	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CTT30_13000	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
CTT30_13010	COG0842	Transport permease protein
CTT30_13015	COG1131	(ABC) transporter
CTT30_13020	COG0659	secondary active sulfate transmembrane transporter activity
CTT30_13025	COG0288	reversible hydration of carbon dioxide
CTT30_13040	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CTT30_13045	COG0508	dehydrogenase complex catalyzes the overall conversion of
CTT30_13050	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
CTT30_13055	COG2186	Transcriptional regulator
CTT30_13060	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CTT30_13065	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CTT30_13070	COG4974	Belongs to the 'phage' integrase family
CTT30_13075	COG0716	FMN binding
CTT30_13085	COG0157	Belongs to the NadC ModD family
CTT30_13090	COG4969	Belongs to the N-Me-Phe pilin family
CTT30_13095	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CTT30_13100	COG1459	type II secretion system
CTT30_13110	COG0237	dephospho-CoA kinase activity
CTT30_13115	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
CTT30_13120	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
CTT30_13130	COG0336	Belongs to the RNA methyltransferase TrmD family
CTT30_13140	COG0228	four-way junction DNA binding
CTT30_13145	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CTT30_13150	COG4137	Cytochrome C assembly protein
CTT30_13155	COG4536	flavin adenine dinucleotide binding
CTT30_13160	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CTT30_13165	COG4942	peptidase
CTT30_13165	COG1388	LysM domain
CTT30_13175	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
CTT30_13180	COG0585	pseudouridine synthase activity
CTT30_13185	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
CTT30_13190	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
CTT30_13195	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
CTT30_13200	COG1968	undecaprenyl-diphosphatase activity
CTT30_13205	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CTT30_13210	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CTT30_13215	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
CTT30_13220	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CTT30_13225	COG3385	transposase activity
CTT30_13230	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CTT30_13235	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CTT30_13240	COG1610	YqeY-like protein
CTT30_13245	COG0358	DNA primase activity
CTT30_13260	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
CTT30_13265	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
CTT30_13270	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CTT30_13275	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CTT30_13280	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CTT30_13290	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CTT30_13295	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CTT30_13300	COG3610	response to peptide
CTT30_13305	COG2966	Psort location CytoplasmicMembrane, score
CTT30_13310	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CTT30_13320	COG0261	This protein binds to 23S rRNA in the presence of protein L20
CTT30_13325	COG0142	geranyltranstransferase activity
CTT30_13380	COG3437	response regulator, receiver
CTT30_13395	COG0270	DNA (cytosine-5-)-methyltransferase activity
CTT30_13430	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
CTT30_13495	COG1854	S-ribosylhomocysteine lyase activity
CTT30_13510	COG0612	Peptidase, M16
CTT30_13515	COG1238	metal cluster binding
CTT30_13525	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
CTT30_13530	COG0511	ligase activity, forming carbon-carbon bonds
CTT30_13530	COG5016	pyruvate
CTT30_13535	COG3630	sodium ion export across plasma membrane
CTT30_13600	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CTT30_13605	COG1546	Belongs to the CinA family
CTT30_13610	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CTT30_13615	COG0795	lipopolysaccharide-transporting ATPase activity
CTT30_13620	COG0795	lipopolysaccharide-transporting ATPase activity
CTT30_13630	COG2927	DNA polymerase III (CHI subunit)
CTT30_13635	COG0525	valine-tRNA ligase activity
CTT30_13645	COG4269	membrane
CTT30_13655	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CTT30_13660	COG0564	pseudouridine synthase activity
CTT30_13675	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
CTT30_13690	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
CTT30_13695	COG0251	oxidation-reduction process
CTT30_13700	COG0039	L-malate dehydrogenase activity
CTT30_13705	COG1438	arginine binding
CTT30_13710	COG2358	TRAP transporter, solute receptor (TAXI family
CTT30_13720	COG0589	response to stress
CTT30_13745	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CTT30_13750	COG0527	aspartate kinase activity
CTT30_13755	COG0312	modulator of DNA gyrase
CTT30_13760	COG3028	Belongs to the UPF0307 family
CTT30_13765	COG0204	Acyl-transferase
CTT30_13770	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CTT30_13775	COG5007	Belongs to the BolA IbaG family
CTT30_13785	COG2854	intermembrane phospholipid transfer
CTT30_13790	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CTT30_13795	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CTT30_13800	COG1127	ABC transporter
CTT30_13810	COG0517	IMP dehydrogenase activity
CTT30_13810	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
CTT30_13815	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
CTT30_13825	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
CTT30_13830	COG1137	ATPase activity
CTT30_13840	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CTT30_13845	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CTT30_13850	COG1660	Displays ATPase and GTPase activities
CTT30_13855	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CTT30_13860	COG2239	Acts as a magnesium transporter
CTT30_13865	COG0646	methionine synthase
CTT30_13865	COG1410	methionine synthase
CTT30_13940	COG0175	sulfate reduction
CTT30_13945	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CTT30_13950	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
CTT30_13975	COG3437	response regulator, receiver
CTT30_13980	COG2205	protein histidine kinase activity
CTT30_13980	COG5002	protein histidine kinase activity
CTT30_13980	COG0784	Response regulator, receiver
CTT30_13985	COG0735	belongs to the Fur family
CTT30_13995	COG0529	Catalyzes the synthesis of activated sulfate
CTT30_14000	COG0471	metal ion transport
CTT30_14000	COG3273	potassium ion transport
CTT30_14015	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CTT30_14015	COG1648	precorrin-2 dehydrogenase activity
CTT30_14020	COG0737	Belongs to the 5'-nucleotidase family
CTT30_14030	COG2153	protein acetylation
CTT30_14045	COG0545	Peptidyl-prolyl cis-trans isomerase
CTT30_14055	COG0203	ribosomal protein L17
CTT30_14060	COG0202	RNA polymerase activity
CTT30_14070	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CTT30_14075	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CTT30_14080	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CTT30_14085	COG0201	protein transport
CTT30_14090	COG0200	Binds to the 23S rRNA
CTT30_14095	COG1841	ribosomal large subunit assembly
CTT30_14110	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CTT30_14115	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CTT30_14125	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CTT30_14140	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CTT30_14155	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CTT30_14160	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CTT30_14165	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CTT30_14180	COG0088	Forms part of the polypeptide exit tunnel
CTT30_14185	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CTT30_14190	COG0051	transcription antitermination factor activity, RNA binding
CTT30_14195	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CTT30_14200	COG0557	exoribonuclease II activity
CTT30_14205	COG0402	S-adenosylhomocysteine deaminase activity
CTT30_14210	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
CTT30_14215	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CTT30_14225	COG1047	Peptidyl-prolyl cis-trans
CTT30_14240	COG2249	NAD(P)H dehydrogenase (quinone) activity
CTT30_14245	COG0488	(ABC) transporter
CTT30_14255	COG0429	hydrolase of the alpha beta-hydrolase fold
CTT30_14260	COG3089	Belongs to the UPF0270 family
CTT30_14265	COG3954	Phosphoribulokinase
CTT30_14270	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CTT30_14290	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CTT30_14295	COG4942	peptidase
CTT30_14315	COG2816	NAD+ diphosphatase activity
CTT30_14320	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
CTT30_14325	COG1288	antiporter activity
CTT30_14340	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CTT30_14345	COG0540	Belongs to the ATCase OTCase family
CTT30_14350	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
CTT30_14355	COG1438	arginine binding
CTT30_14360	COG4232	protein-disulfide reductase activity
CTT30_14370	COG2095	MarC family integral membrane protein
CTT30_14380	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CTT30_14400	COG0149	triose-phosphate isomerase activity
CTT30_14405	COG0534	Mate efflux family protein
CTT30_14410	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CTT30_14415	COG1575	Belongs to the MenA family. Type 1 subfamily
CTT30_14420	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CTT30_14425	COG1509	lysine 2,3-aminomutase activity
CTT30_14435	COG1285	pathogenesis
CTT30_14445	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CTT30_14455	COG0745	RESPONSE REGULATOR receiver
CTT30_14460	COG2205	protein histidine kinase activity
CTT30_14465	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CTT30_14470	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CTT30_14475	COG0180	Tryptophanyl-tRNA synthetase
CTT30_14480	COG0546	phosphoglycolate phosphatase activity
CTT30_14485	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CTT30_14490	COG0338	D12 class N6 adenine-specific DNA methyltransferase
CTT30_14500	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
CTT30_14535	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
CTT30_14545	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CTT30_14545	COG0678	peroxiredoxin activity
CTT30_14550	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CTT30_14555	COG0251	oxidation-reduction process
CTT30_14565	COG0165	Argininosuccinate lyase
CTT30_14565	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
CTT30_14570	COG0137	argininosuccinate synthase activity
CTT30_14575	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CTT30_14580	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CTT30_14650	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
CTT30_14660	COG4206	TonB-dependent receptor
CTT30_14685	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CTT30_14690	COG0534	Mate efflux family protein
CTT30_14700	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CTT30_14710	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CTT30_14715	COG2937	Belongs to the GPAT DAPAT family
CTT30_14725	COG3161	chorismate lyase activity
CTT30_14730	COG1580	Controls the rotational direction of flagella during chemotaxis
CTT30_14735	COG0705	Rhomboid family
CTT30_14740	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CTT30_14745	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CTT30_14750	COG2177	Part of the ABC transporter FtsEX involved in
CTT30_14755	COG2884	Cell division ATP-binding protein ftsE
CTT30_14760	COG0552	protein localization to endoplasmic reticulum
CTT30_14765	COG0742	ribosomal rna small subunit methyltransferase
CTT30_14775	COG2095	MarC family integral membrane protein
CTT30_14825	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CTT30_14830	COG0640	Transcriptional regulator
CTT30_14835	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
CTT30_14840	COG1280	lysine exporter protein (LysE YggA)
CTT30_14845	COG2267	carboxylic ester hydrolase activity
CTT30_14850	COG0561	phosphatase activity
CTT30_14865	COG3148	PFAM DTW domain containing protein
CTT30_14870	COG1011	Hydrolase
CTT30_14885	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CTT30_14890	COG0019	diaminopimelate decarboxylase activity
CTT30_14900	COG1965	Belongs to the frataxin family
CTT30_14905	COG3072	Adenylate cyclase
CTT30_14910	COG0181	hydroxymethylbilane synthase activity
CTT30_14915	COG1587	Uroporphyrinogen-III synthase
CTT30_14920	COG2959	enzyme of heme biosynthesis
CTT30_14925	COG3071	HemY protein
CTT30_14965	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CTT30_14980	COG3118	belongs to the thioredoxin family
CTT30_14990	COG0248	Ppx GppA phosphatase
CTT30_14995	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
CTT30_15005	COG0514	ATP-dependent DNA helicase (RecQ)
CTT30_15010	COG2962	Rard protein
CTT30_15020	COG1280	lysine exporter protein (LysE YggA)
CTT30_15025	COG0405	Gamma-glutamyltransferase
CTT30_15030	COG0210	DNA helicase
CTT30_15040	COG3220	belongs to the UPF0276 family
CTT30_15060	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
CTT30_15065	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CTT30_15080	COG0644	oxidoreductase
CTT30_15090	COG3527	Alpha-acetolactate decarboxylase
CTT30_15105	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CTT30_15110	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CTT30_15120	COG2207	Transcriptional regulator
CTT30_15125	COG3537	Alpha-1,2-mannosidase
CTT30_15135	COG3537	Alpha-1,2-mannosidase
CTT30_15140	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CTT30_15145	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CTT30_15145	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CTT30_15145	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CTT30_15165	COG0477	Major facilitator Superfamily
CTT30_15185	COG2197	response regulator
CTT30_15200	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CTT30_15205	COG0601	transmembrane transport
CTT30_15250	COG0210	DNA helicase
CTT30_15255	COG1309	transcriptional regulator
CTT30_15260	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CTT30_15265	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CTT30_15270	COG2960	long-chain fatty acid transporting porin activity
CTT30_15275	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CTT30_15280	COG0583	DNA-binding transcription factor activity
CTT30_15285	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CTT30_15315	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CTT30_15315	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CTT30_15330	COG0084	hydrolase, TatD family'
CTT30_15335	COG0805	protein transport
CTT30_15340	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CTT30_15345	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CTT30_15350	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CTT30_15360	COG2226	methyltransferase
CTT30_15365	COG1322	Protein conserved in bacteria
CTT30_15375	COG1639	'signal transduction protein
CTT30_15395	COG2081	HI0933 family
CTT30_15405	COG1528	Iron-storage protein
CTT30_15410	COG0589	response to stress
CTT30_15425	COG0742	ribosomal rna small subunit methyltransferase
CTT30_15430	COG5001	Diguanylate cyclase
CTT30_15430	COG5002	protein histidine kinase activity
CTT30_15435	COG1522	sequence-specific DNA binding
CTT30_15455	COG0006	proline dipeptidase activity
CTT30_15455	COG0006	proline dipeptidase activity
CTT30_15465	COG2022	thiamine diphosphate biosynthetic process
CTT30_15475	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CTT30_15480	COG0352	thiamine-phosphate diphosphorylase activity
CTT30_15495	COG2132	Multicopper oxidase
CTT30_15550	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CTT30_15555	COG1739	Uncharacterized protein family UPF0029
CTT30_15565	COG0183	Belongs to the thiolase family
CTT30_15570	COG0583	DNA-binding transcription factor activity
CTT30_15575	COG2814	Major facilitator Superfamily
CTT30_15585	COG0765	amino acid transport
CTT30_15595	COG0355	proton-transporting ATP synthase activity, rotational mechanism
CTT30_15600	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CTT30_15605	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CTT30_15610	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CTT30_15615	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CTT30_15620	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CTT30_15635	COG3312	ion transport
CTT30_15640	COG1475	DNA binding
CTT30_15645	COG1192	Involved in chromosome partitioning
CTT30_15650	COG0357	Ribosomal RNA small subunit methyltransferase G
CTT30_15655	COG0445	tRNA wobble uridine modification
CTT30_15660	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
CTT30_15670	COG0706	membrane insertase activity
CTT30_15685	COG0230	Belongs to the bacterial ribosomal protein bL34 family
CTT30_15690	COG1126	abc transporter atp-binding protein
CTT30_15715	COG1444	tRNA N-acetyltransferase activity
CTT30_15730	COG0643	Histidine kinase
CTT30_15730	COG2198	Histidine kinase
CTT30_15740	COG0835	chemotaxis
CTT30_15745	COG0840	transmembrane signaling receptor activity
CTT30_15750	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CTT30_15800	COG0583	DNA-binding transcription factor activity
CTT30_15805	COG1175	transmembrane transport
CTT30_15825	COG0546	phosphoglycolate phosphatase activity
CTT30_15830	COG3842	ATPase activity
CTT30_15835	COG0589	response to stress
CTT30_15840	COG2723	6-phospho-beta-galactosidase activity
CTT30_15870	COG0583	DNA-binding transcription factor activity
CTT30_15885	COG0351	phosphomethylpyrimidine kinase
CTT30_15890	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CTT30_15905	COG4977	sequence-specific DNA binding
CTT30_15920	COG0671	phosphoesterase, PA-phosphatase related
CTT30_15960	COG0697	spore germination
CTT30_15995	COG0471	metal ion transport
CTT30_16005	COG2814	Major facilitator Superfamily
CTT30_16010	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
CTT30_16050	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CTT30_16065	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CTT30_16075	COG2207	Transcriptional regulator
CTT30_16090	COG3437	response regulator, receiver
CTT30_16090	COG4999	Histidine kinase
CTT30_16090	COG2205	protein histidine kinase activity
CTT30_16090	COG3850	Histidine kinase
CTT30_16095	COG0402	S-adenosylhomocysteine deaminase activity
CTT30_16105	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CTT30_16115	COG2186	Transcriptional regulator
CTT30_16125	COG0402	S-adenosylhomocysteine deaminase activity
CTT30_16130	COG1404	Belongs to the peptidase S8 family
CTT30_16160	COG0456	acetyltransferase
CTT30_16175	COG2909	trisaccharide binding
CTT30_16180	COG0058	SHG alpha-glucan phosphorylase activity
CTT30_16185	COG1640	4-alpha-glucanotransferase
CTT30_16190	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CTT30_16210	COG1472	Belongs to the glycosyl hydrolase 3 family
CTT30_16215	COG3876	Protein conserved in bacteria
CTT30_16230	COG3293	Transposase
CTT30_16280	COG0561	phosphatase activity
CTT30_16300	COG0488	(ABC) transporter
CTT30_16325	COG1733	regulation of RNA biosynthetic process
CTT30_16330	COG0456	acetyltransferase
CTT30_16335	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CTT30_16340	COG0662	Cupin 2, conserved barrel domain protein
CTT30_16345	COG0527	aspartate kinase activity
CTT30_16365	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CTT30_16365	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CTT30_16365	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
CTT30_16370	COG0383	alpha-mannosidase activity
CTT30_16380	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CTT30_16380	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CTT30_16380	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CTT30_16400	COG0113	porphobilinogen synthase activity
CTT30_16405	COG0183	Belongs to the thiolase family
CTT30_16415	COG3246	L-lysine catabolic process to acetate
CTT30_16455	COG0583	DNA-binding transcription factor activity
CTT30_16460	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
CTT30_16470	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CTT30_16475	COG2205	protein histidine kinase activity
CTT30_16475	COG3437	response regulator, receiver
CTT30_16475	COG3850	Histidine kinase
CTT30_16475	COG4999	Histidine kinase
CTT30_16485	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CTT30_16520	COG0657	acetylesterase activity
CTT30_16530	COG4175	Glycine betaine
CTT30_16530	COG3448	diguanylate cyclase activity
CTT30_16535	COG4176	ABC-type proline glycine betaine transport system permease component
CTT30_16555	COG2095	MarC family integral membrane protein
CTT30_16565	COG0583	DNA-binding transcription factor activity
CTT30_16590	COG4964	Belongs to the GSP D family
CTT30_16600	COG2894	cell division
CTT30_16655	COG1477	protein flavinylation
CTT30_16670	COG0840	transmembrane signaling receptor activity
CTT30_16680	COG0573	inorganic phosphate transmembrane transporter activity
CTT30_16685	COG0581	inorganic phosphate transmembrane transporter activity
CTT30_16690	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CTT30_16705	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
CTT30_16710	COG1162	GTPase activity
CTT30_16720	COG0363	glucosamine-6-phosphate deaminase activity
CTT30_16740	COG0454	-acetyltransferase
CTT30_16765	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CTT30_16775	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CTT30_16780	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
CTT30_16785	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
CTT30_16800	COG3655	Transcriptional regulator
CTT30_16810	COG0137	argininosuccinate synthase activity
CTT30_16825	COG3608	succinylglutamate desuccinylase aspartoacylase
CTT30_16845	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CTT30_16855	COG3314	Sporulation integral membrane protein YlbJ
CTT30_16860	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CTT30_16865	COG1151	hydroxylamine reductase activity
CTT30_16875	COG0583	DNA-binding transcription factor activity
CTT30_16890	COG3604	Transcriptional regulator
CTT30_16920	COG3046	protein related to deoxyribodipyrimidine photolyase
CTT30_16930	COG2329	Antibiotic biosynthesis monooxygenase
CTT30_16935	COG3304	Inner membrane component domain
CTT30_16945	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CTT30_16995	COG0004	ammonium transporteR
CTT30_17005	COG3383	formate dehydrogenase (NAD+) activity
CTT30_17015	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CTT30_17035	COG0739	heme binding
CTT30_17040	COG3047	cAMP biosynthetic process
CTT30_17080	COG2271	Major facilitator Superfamily
CTT30_17085	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CTT30_17105	COG0431	NADPH-dependent FMN reductase
CTT30_17110	COG0697	spore germination
CTT30_17135	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CTT30_17135	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CTT30_17140	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CTT30_17140	COG2207	Transcriptional regulator
CTT30_17145	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CTT30_17150	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CTT30_17160	COG1522	sequence-specific DNA binding
CTT30_17170	COG0840	transmembrane signaling receptor activity
CTT30_17180	COG1357	PFAM Pentapeptide repeats (8 copies)
CTT30_17200	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CTT30_17215	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CTT30_17225	COG1309	transcriptional regulator
CTT30_17240	COG0745	RESPONSE REGULATOR receiver
CTT30_17245	COG5002	protein histidine kinase activity
CTT30_17300	COG1054	Belongs to the UPF0176 family
CTT30_17315	COG1028	Short-chain dehydrogenase reductase Sdr
CTT30_17340	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CTT30_17350	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CTT30_17370	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CTT30_17380	COG1733	regulation of RNA biosynthetic process
CTT30_17395	COG3795	YCII-related domain
CTT30_17400	COG4941	Belongs to the sigma-70 factor family
CTT30_17405	COG0625	glutathione transferase activity
CTT30_17410	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CTT30_17415	COG0366	Alpha amylase catalytic
CTT30_17435	COG2084	Dehydrogenase
CTT30_17450	COG2130	NADP-dependent
CTT30_17455	COG1309	transcriptional regulator
CTT30_17470	COG3097	Belongs to the UPF0267 family
CTT30_17475	COG0513	Belongs to the DEAD box helicase family
CTT30_17485	COG1228	amidohydrolase
CTT30_17510	COG1175	transmembrane transport
CTT30_17515	COG0395	ABC-type sugar transport system, permease component
CTT30_17520	COG1554	hydrolase, family 65, central catalytic
CTT30_17525	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CTT30_17530	COG3842	ATPase activity
CTT30_17540	COG1621	beta-fructofuranosidase activity
CTT30_17550	COG1609	Transcriptional regulator
CTT30_17580	COG3842	ATPase activity
CTT30_17585	COG1472	Belongs to the glycosyl hydrolase 3 family
CTT30_17600	COG0110	maltose O-acetyltransferase activity
CTT30_17625	COG2356	endonuclease I
CTT30_17640	COG0564	pseudouridine synthase activity
CTT30_17660	COG0583	DNA-binding transcription factor activity
CTT30_17665	COG2814	Major facilitator Superfamily
CTT30_17690	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CTT30_17700	COG0291	Belongs to the bacterial ribosomal protein bL35 family
CTT30_17705	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CTT30_17710	COG0579	oxidoreductase
CTT30_17730	COG1012	belongs to the aldehyde dehydrogenase family
CTT30_17735	COG3284	Transcriptional regulator
CTT30_17755	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CTT30_17760	COG0363	glucosamine-6-phosphate deaminase activity
CTT30_17765	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CTT30_17770	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
CTT30_17780	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CTT30_17790	COG2271	Major facilitator Superfamily
CTT30_17795	COG3851	Histidine kinase
CTT30_17800	COG2197	response regulator
CTT30_17820	COG0418	dihydroorotase activity
CTT30_17825	COG0633	Ferredoxin
CTT30_17825	COG3217	Mosc domain protein beta barrel domain protein
CTT30_17825	COG0633	Ferredoxin
CTT30_17825	COG3217	Mosc domain protein beta barrel domain protein
CTT30_17835	COG1349	DNA-binding transcription factor activity
CTT30_17855	COG2354	Protein conserved in bacteria
CTT30_17865	COG0366	Alpha amylase catalytic
CTT30_17890	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CTT30_17905	COG0739	heme binding
CTT30_17920	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
CTT30_17925	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CTT30_17935	COG0848	biopolymer transport protein
CTT30_17940	COG0811	peptide transport
CTT30_17945	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
CTT30_17955	COG3721	Heme iron utilization protein
CTT30_17960	COG0748	coenzyme F420 binding
CTT30_17965	COG2096	Adenosyltransferase
CTT30_17970	COG3842	ATPase activity
CTT30_17980	COG1175	transmembrane transport
CTT30_17985	COG3833	ABC-type maltose transport systems, permease component
CTT30_17995	COG4533	DNA binding
CTT30_18035	COG5002	protein histidine kinase activity
CTT30_18035	COG2205	protein histidine kinase activity
CTT30_18035	COG0784	Response regulator, receiver
CTT30_18045	COG0861	Integral membrane protein TerC family
CTT30_18050	COG0402	S-adenosylhomocysteine deaminase activity
CTT30_18055	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CTT30_18060	COG1566	PFAM secretion protein HlyD family protein
CTT30_18085	COG0745	RESPONSE REGULATOR receiver
CTT30_18105	COG0121	glutamine amidotransferase
CTT30_18110	COG0531	amino acid
CTT30_18130	COG0673	inositol 2-dehydrogenase activity
CTT30_18135	COG1765	OsmC-like protein
CTT30_18140	COG3385	transposase activity
CTT30_18145	COG0110	maltose O-acetyltransferase activity
CTT30_18165	COG2304	oxidoreductase activity
CTT30_18170	COG2304	oxidoreductase activity
CTT30_18185	COG0714	Associated with various cellular activities
CTT30_18215	COG5002	protein histidine kinase activity
CTT30_18220	COG0745	RESPONSE REGULATOR receiver
CTT30_18230	COG0745	RESPONSE REGULATOR receiver
CTT30_18235	COG2205	protein histidine kinase activity
CTT30_18240	COG4452	Inner membrane protein CreD
CTT30_18245	COG0346	lactoylglutathione lyase activity
CTT30_18255	COG0156	8-amino-7-oxononanoate synthase activity
CTT30_18260	COG1063	alcohol dehydrogenase
CTT30_18275	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CTT30_18280	COG2195	Cleaves the N-terminal amino acid of tripeptides
CTT30_18305	COG2205	protein histidine kinase activity
CTT30_18305	COG0784	Response regulator, receiver
CTT30_18310	COG2205	protein histidine kinase activity
CTT30_18310	COG0784	Response regulator, receiver
CTT30_18315	COG5002	protein histidine kinase activity
CTT30_18315	COG0784	Response regulator, receiver
CTT30_18315	COG2205	protein histidine kinase activity
CTT30_18330	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CTT30_18335	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CTT30_18340	COG3186	Phenylalanine-4-hydroxylase
CTT30_18380	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CTT30_18385	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CTT30_18405	COG1454	alcohol dehydrogenase
CTT30_18410	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
CTT30_18420	COG1011	Hydrolase
CTT30_18450	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CTT30_18455	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CTT30_18460	COG1840	ABC-type Fe3 transport system, periplasmic component
CTT30_18465	COG3842	ATPase activity
CTT30_18490	COG2866	Carboxypeptidase
CTT30_18495	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CTT30_18500	COG0583	DNA-binding transcription factor activity
CTT30_18505	COG1760	l-serine dehydratase
CTT30_18530	COG0835	chemotaxis
CTT30_18530	COG0784	Response regulator, receiver
CTT30_18535	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CTT30_18555	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
CTT30_18560	COG0494	nUDIX hydrolase
CTT30_18565	COG0714	Associated with various cellular activities
CTT30_18570	COG2425	protein containing a von Willebrand factor type A (vWA) domain
CTT30_18595	COG3706	GGDEF domain
CTT30_18600	COG1846	Transcriptional regulator
CTT30_18605	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CTT30_18630	COG3048	D-serine ammonia-lyase activity
CTT30_18650	COG0814	amino acid
CTT30_18660	COG0513	Belongs to the DEAD box helicase family
CTT30_18665	COG0840	transmembrane signaling receptor activity
CTT30_18670	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CTT30_18675	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CTT30_18690	COG0546	phosphoglycolate phosphatase activity
CTT30_18705	COG0243	molybdopterin cofactor binding
CTT30_18710	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CTT30_18710	COG1648	precorrin-2 dehydrogenase activity
CTT30_18715	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CTT30_18725	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CTT30_18725	COG1116	anion transmembrane transporter activity
CTT30_18730	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CTT30_18735	COG1116	anion transmembrane transporter activity
CTT30_18740	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CTT30_18740	COG2146	nitrite reductase [NAD(P)H] activity
CTT30_18745	COG2146	nitrite reductase [NAD(P)H] activity
CTT30_18750	COG1858	cytochrome C peroxidase
CTT30_18775	COG3118	belongs to the thioredoxin family
CTT30_18780	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CTT30_18785	COG0420	3'-5' exonuclease activity
CTT30_18790	COG0419	ATPase involved in DNA repair
CTT30_18795	COG0784	Response regulator, receiver
CTT30_18795	COG2205	protein histidine kinase activity
CTT30_18800	COG0156	8-amino-7-oxononanoate synthase activity
CTT30_18810	COG0038	chloride channel
CTT30_18815	COG0523	cobalamin synthesis protein
CTT30_18820	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CTT30_18845	COG1522	sequence-specific DNA binding
CTT30_18850	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CTT30_18855	COG1072	(Pantothenic acid kinase))
CTT30_18865	COG1063	alcohol dehydrogenase
CTT30_18870	COG2213	PTS system mannitol-specific
CTT30_18875	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CTT30_18880	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CTT30_18885	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CTT30_18895	COG0583	DNA-binding transcription factor activity
CTT30_18910	COG2897	thiosulfate sulfurtransferase activity
CTT30_18915	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CTT30_18930	COG0513	Belongs to the DEAD box helicase family
CTT30_18935	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CTT30_18935	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CTT30_18965	COG3293	Transposase
CTT30_18970	COG0800	Aldolase
CTT30_18975	COG1803	Methylglyoxal synthase
CTT30_18980	COG1879	ABC-type sugar transport system periplasmic component
CTT30_18985	COG0784	Response regulator, receiver
CTT30_18985	COG2198	Histidine kinase
CTT30_18985	COG2205	protein histidine kinase activity
CTT30_18995	COG1979	alcohol dehydrogenase
CTT30_19000	COG2207	Transcriptional regulator
CTT30_19005	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CTT30_19015	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CTT30_19015	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CTT30_19015	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
CTT30_19020	COG1105	Belongs to the carbohydrate kinase PfkB family
CTT30_19025	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CTT30_19025	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CTT30_19030	COG1609	Transcriptional regulator
CTT30_19045	COG1492	cobalamin metabolic process
CTT30_19050	COG0725	ABC transporter, periplasmic molybdate-binding protein
CTT30_19055	COG4149	molybdate abc transporter
CTT30_19060	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
CTT30_19070	COG2203	Gaf domain
CTT30_19070	COG3706	GGDEF domain
CTT30_19070	COG5001	Diguanylate cyclase
CTT30_19070	COG4251	negative regulation of phosphorylation
CTT30_19075	COG3706	GGDEF domain
CTT30_19090	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
CTT30_19095	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
CTT30_19105	COG0745	RESPONSE REGULATOR receiver
CTT30_19120	COG3140	Belongs to the UPF0181 family
CTT30_19140	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CTT30_19180	COG0023	Translation Initiation Factor
CTT30_19200	COG3266	domain, Protein
CTT30_19205	COG0045	succinate-CoA ligase (ADP-forming) activity
CTT30_19205	COG1042	CoA-binding domain protein
CTT30_19205	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CTT30_19210	COG0583	DNA-binding transcription factor activity
CTT30_19215	COG1629	transport
CTT30_19215	COG4771	TonB-dependent receptor
CTT30_19220	COG0840	transmembrane signaling receptor activity
CTT30_19240	COG3706	GGDEF domain
CTT30_19260	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
CTT30_19265	COG1028	Short-chain dehydrogenase reductase Sdr
CTT30_19275	COG1024	Enoyl-CoA hydratase
CTT30_19280	COG1024	Enoyl-CoA hydratase
CTT30_19295	COG0183	Belongs to the thiolase family
CTT30_19305	COG1960	acyl-CoA dehydrogenase activity
CTT30_19310	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CTT30_19315	COG1024	Enoyl-CoA hydratase
CTT30_19350	COG2259	Doxx family
CTT30_19355	COG1741	Belongs to the pirin family
CTT30_19365	COG1115	amino acid carrier protein
CTT30_19370	COG0583	DNA-binding transcription factor activity
CTT30_19375	COG2910	NAD(P)H-binding
CTT30_19410	COG1132	(ABC) transporter
CTT30_19415	COG1129	ABC transporter
CTT30_19435	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CTT30_19440	COG3300	MHYT domain
CTT30_19440	COG5001	Diguanylate cyclase
CTT30_19445	COG0789	Transcriptional regulator
CTT30_19455	COG2176	DNA-directed DNA polymerase activity
CTT30_19465	COG4533	DNA binding
CTT30_19475	COG2050	protein possibly involved in aromatic compounds catabolism
CTT30_19515	COG0737	Belongs to the 5'-nucleotidase family
CTT30_19520	COG3593	DNA synthesis involved in DNA repair
CTT30_19530	COG0583	DNA-binding transcription factor activity
CTT30_19535	COG2116	formate transmembrane transporter activity
CTT30_19540	COG2353	YceI-like domain
CTT30_19545	COG3038	cytochrome b561
CTT30_19565	COG3069	C4-dicarboxylate transmembrane transporter activity
CTT30_19570	COG2197	response regulator
CTT30_19575	COG3850	Histidine kinase
CTT30_19580	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CTT30_19590	COG0243	molybdopterin cofactor binding
CTT30_19610	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CTT30_19615	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
CTT30_19625	COG1984	allophanate hydrolase subunit 2
CTT30_19635	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
CTT30_19640	COG4181	ATPase activity
CTT30_19650	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
CTT30_19655	COG1716	ATPase activity
CTT30_19655	COG5001	Diguanylate cyclase
CTT30_19665	COG0484	heat shock protein binding
CTT30_19680	COG1324	tolerance protein
CTT30_19685	COG0210	DNA helicase
CTT30_19690	COG1289	transmembrane transporter activity
CTT30_19705	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CTT30_19730	COG2827	Endonuclease containing a URI domain
CTT30_19735	COG3132	Protein of unknown function, DUF480
CTT30_19745	COG2926	Belongs to the UPF0265 family
CTT30_19755	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CTT30_19760	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CTT30_19765	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CTT30_19775	COG0247	lactate metabolic process
CTT30_19795	COG0545	Peptidyl-prolyl cis-trans isomerase
CTT30_19805	COG0189	ligase activity
CTT30_19805	COG4067	protein conserved in archaea
CTT30_19815	COG0602	queuosine metabolic process
CTT30_19820	COG1328	CTP reductase activity
CTT30_19855	COG3240	lipase activity
CTT30_19860	COG2814	Major facilitator Superfamily
CTT30_19865	COG1794	racemase activity, acting on amino acids and derivatives
CTT30_19880	COG0183	Belongs to the thiolase family
CTT30_19890	COG1309	transcriptional regulator
CTT30_19930	COG1522	sequence-specific DNA binding
CTT30_19965	COG0515	serine threonine protein kinase
CTT30_19965	COG2815	serine threonine protein kinase
CTT30_19990	COG3501	Rhs element vgr protein
CTT30_20030	COG0739	heme binding
CTT30_20040	COG0840	transmembrane signaling receptor activity
CTT30_20065	COG2759	Belongs to the formate--tetrahydrofolate ligase family
CTT30_20095	COG4172	Belongs to the ABC transporter superfamily
CTT30_20100	COG4239	(ABC) transporter, permease
CTT30_20105	COG4174	ABC transporter (Permease)
CTT30_20110	COG4166	transmembrane transport
CTT30_20120	COG0840	transmembrane signaling receptor activity
CTT30_20125	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CTT30_20130	COG1067	ATP-dependent peptidase activity
CTT30_20140	COG4172	Belongs to the ABC transporter superfamily
CTT30_20145	COG0583	DNA-binding transcription factor activity
CTT30_20150	COG1620	l-lactate permease
CTT30_20155	COG1304	FMN binding
CTT30_20170	COG3448	diguanylate cyclase activity
CTT30_20170	COG4175	Glycine betaine
CTT30_20190	COG1012	belongs to the aldehyde dehydrogenase family
CTT30_20195	COG1309	transcriptional regulator
CTT30_20205	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CTT30_20210	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CTT30_20225	COG2200	EAL domain
CTT30_20230	COG2207	Transcriptional regulator
CTT30_20235	COG2814	Major facilitator Superfamily
CTT30_20240	COG0583	DNA-binding transcription factor activity
CTT30_20245	COG3394	polysaccharide catabolic process
CTT30_20250	COG0633	Ferredoxin
CTT30_20250	COG3217	Mosc domain protein beta barrel domain protein
CTT30_20255	COG2205	protein histidine kinase activity
CTT30_20255	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CTT30_20265	COG0657	acetylesterase activity
CTT30_20275	COG0674	pyruvate-flavodoxin oxidoreductase activity
CTT30_20275	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
CTT30_20280	COG1013	pyruvate-flavodoxin oxidoreductase activity
CTT30_20305	COG2197	response regulator
CTT30_20325	COG0516	GMP reductase activity
CTT30_20330	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CTT30_20330	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CTT30_20345	COG3437	response regulator, receiver
CTT30_20350	COG4999	Histidine kinase
CTT30_20350	COG3850	Histidine kinase
CTT30_20350	COG3437	response regulator, receiver
CTT30_20350	COG2205	protein histidine kinase activity
CTT30_20360	COG2172	sigma factor antagonist activity
CTT30_20370	COG1366	Belongs to the anti-sigma-factor antagonist family
CTT30_20375	COG0840	transmembrane signaling receptor activity
CTT30_20395	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
CTT30_20400	COG0513	Belongs to the DEAD box helicase family
CTT30_20410	COG4191	Histidine kinase
CTT30_20410	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CTT30_20415	COG3437	response regulator, receiver
CTT30_20415	COG0784	Response regulator, receiver
CTT30_20420	COG1609	Transcriptional regulator
CTT30_20425	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CTT30_20435	COG1172	Belongs to the binding-protein-dependent transport system permease family
CTT30_20440	COG1129	ABC transporter
CTT30_20445	COG1869	D-ribose catabolic process
CTT30_20465	COG0004	ammonium transporteR
CTT30_20490	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CTT30_20540	COG1609	Transcriptional regulator
CTT30_20545	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CTT30_20550	COG3265	gluconokinase activity
CTT30_20555	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CTT30_20555	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
CTT30_20565	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
CTT30_20595	COG5001	Diguanylate cyclase
CTT30_20605	COG3123	guanosine phosphorylase activity
CTT30_20615	COG0668	transmembrane transport
CTT30_20635	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CTT30_20675	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CTT30_20680	COG4232	protein-disulfide reductase activity
CTT30_20695	COG1280	lysine exporter protein (LysE YggA)
CTT30_20725	COG0443	Heat shock 70 kDa protein
CTT30_20730	COG0583	DNA-binding transcription factor activity
CTT30_20740	COG4948	Mandelate Racemase Muconate Lactonizing
CTT30_20745	COG1396	sequence-specific DNA binding
CTT30_20750	COG5001	Diguanylate cyclase
CTT30_20755	COG0683	leucine binding
CTT30_20760	COG3706	GGDEF domain
CTT30_20775	COG1523	belongs to the glycosyl hydrolase 13 family
CTT30_20795	COG3279	Response regulator of the LytR AlgR family
CTT30_20800	COG3275	phosphorelay sensor kinase activity
CTT30_20815	COG4591	ABC-type transport system involved in lipoprotein release permease component
CTT30_20820	COG1136	(ABC) transporter
CTT30_20855	COG2249	NAD(P)H dehydrogenase (quinone) activity
CTT30_20865	COG0583	DNA-binding transcription factor activity
CTT30_20875	COG3530	Putative quorum-sensing-regulated virulence factor
CTT30_20890	COG1686	Belongs to the peptidase S11 family
CTT30_20905	COG3036	rescue of stalled ribosome
CTT30_20910	COG1278	Cold shock
CTT30_20925	COG1017	nitric oxide dioxygenase activity
CTT30_20925	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CTT30_20930	COG3604	Transcriptional regulator
CTT30_20945	COG2249	NAD(P)H dehydrogenase (quinone) activity
CTT30_20955	COG0534	Mate efflux family protein
CTT30_20960	COG0697	spore germination
CTT30_20980	COG0583	DNA-binding transcription factor activity
CTT30_20985	COG5001	Diguanylate cyclase
CTT30_21020	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CTT30_21030	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CTT30_21035	COG0509	glycine decarboxylation via glycine cleavage system
CTT30_21070	COG1132	(ABC) transporter
CTT30_21075	COG0589	response to stress
CTT30_21085	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CTT30_21085	COG2111	Na H antiporter
CTT30_21090	COG1006	Multisubunit Na H antiporter MnhC subunit
CTT30_21095	COG0651	ATP synthesis coupled electron transport
CTT30_21100	COG1863	multisubunit Na H antiporter MnhE subunit
CTT30_21105	COG2212	antiporter activity
CTT30_21110	COG1320	monovalent cation:proton antiporter activity
CTT30_21135	COG0673	inositol 2-dehydrogenase activity
CTT30_21150	COG5553	Cysteine dioxygenase type I
CTT30_21155	COG0840	transmembrane signaling receptor activity
CTT30_21160	COG0840	transmembrane signaling receptor activity
CTT30_21200	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
CTT30_21210	COG0438	transferase activity, transferring glycosyl groups
CTT30_21220	COG1045	serine acetyltransferase
CTT30_21235	COG0438	transferase activity, transferring glycosyl groups
CTT30_21240	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
CTT30_21245	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CTT30_21250	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CTT30_21255	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CTT30_21265	COG4989	oxidoreductase activity
CTT30_21275	COG0366	Alpha amylase catalytic
CTT30_21285	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CTT30_21290	COG1126	abc transporter atp-binding protein
CTT30_21295	COG0765	amino acid transport
CTT30_21300	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CTT30_21305	COG0765	amino acid transport
CTT30_21310	COG0109	protoheme IX farnesyltransferase activity
CTT30_21315	COG1612	heme a metabolic process
CTT30_21340	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
CTT30_21345	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CTT30_21350	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CTT30_21355	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CTT30_21370	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
CTT30_21375	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CTT30_21375	COG0574	Belongs to the PEP-utilizing enzyme family
CTT30_21380	COG3314	Sporulation integral membrane protein YlbJ
CTT30_21390	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CTT30_21415	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CTT30_21430	COG1741	Belongs to the pirin family
CTT30_21475	COG2205	protein histidine kinase activity
CTT30_21480	COG0745	RESPONSE REGULATOR receiver
CTT30_21505	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CTT30_21515	COG0523	cobalamin synthesis protein
CTT30_21520	COG2988	succinylglutamate desuccinylase activity
CTT30_21530	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CTT30_21535	COG2423	ornithine cyclodeaminase activity
CTT30_21545	COG3938	Belongs to the proline racemase family
CTT30_21555	COG2186	Transcriptional regulator
CTT30_21570	COG0601	transmembrane transport
CTT30_21575	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CTT30_21590	COG0006	proline dipeptidase activity
CTT30_21610	COG4934	collagen metabolic process
CTT30_21620	COG3568	Endonuclease Exonuclease Phosphatase
CTT30_21630	COG3291	Pkd domain containing protein
CTT30_21635	COG0513	Belongs to the DEAD box helicase family
CTT30_21645	COG1388	LysM domain
CTT30_21645	COG1376	ErfK ybiS ycfS ynhG family protein
CTT30_21650	COG0415	Belongs to the DNA photolyase family
CTT30_21655	COG0789	Transcriptional regulator
CTT30_21660	COG3272	Protein of unknown function (DUF1722)
CTT30_21665	COG0813	purine-nucleoside phosphorylase activity
CTT30_21695	COG1566	PFAM secretion protein HlyD family protein
CTT30_21700	COG0786	glutamate:sodium symporter activity
CTT30_21715	COG1132	(ABC) transporter
CTT30_21765	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CTT30_21775	COG0259	pyridoxamine-phosphate oxidase activity
CTT30_21805	COG3033	Beta-eliminating lyase
CTT30_21810	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
CTT30_21815	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
CTT30_21820	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CTT30_21830	COG1999	signal sequence binding
CTT30_21845	COG1671	Belongs to the UPF0178 family
CTT30_21850	COG0393	Putative heavy-metal-binding
CTT30_21855	COG0583	DNA-binding transcription factor activity
CTT30_21860	COG2814	Major facilitator Superfamily
CTT30_21870	COG0584	glycerophosphoryl diester phosphodiesterase
CTT30_21875	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CTT30_21885	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CTT30_21910	COG3527	Alpha-acetolactate decarboxylase
CTT30_21915	COG2814	Major facilitator Superfamily
CTT30_21920	COG0028	Belongs to the TPP enzyme family
CTT30_22075	COG1301	dicarboxylic acid transport
CTT30_22080	COG0840	transmembrane signaling receptor activity
CTT30_22095	COG4266	Belongs to the allantoicase family
CTT30_22115	COG2252	PERMEase
CTT30_22130	COG3214	Protein conserved in bacteria
CTT30_22145	COG2205	protein histidine kinase activity
CTT30_22200	COG0109	protoheme IX farnesyltransferase activity
CTT30_22205	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CTT30_22210	COG1845	cytochrome c oxidase, subunit III
CTT30_22215	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CTT30_22220	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CTT30_22225	COG2706	6-phosphogluconolactonase activity
CTT30_22245	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CTT30_22265	COG0459	protein refolding
CTT30_22270	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CTT30_22275	COG0071	Belongs to the small heat shock protein (HSP20) family
CTT30_22280	COG0628	permease
CTT30_22315	COG0668	transmembrane transport
CTT30_22320	COG1597	lipid kinase activity
CTT30_22320	COG1803	Methylglyoxal synthase
CTT30_22350	COG5002	protein histidine kinase activity
CTT30_22350	COG5001	Diguanylate cyclase
CTT30_22370	COG2084	Dehydrogenase
CTT30_22375	COG3622	Belongs to the hyi family
CTT30_22380	COG3960	tartronate-semialdehyde synthase activity
CTT30_22385	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CTT30_22395	COG0583	DNA-binding transcription factor activity
CTT30_22400	COG1288	antiporter activity
CTT30_22410	COG1846	Transcriptional regulator
CTT30_22415	COG0697	spore germination
CTT30_22420	COG1028	Short-chain dehydrogenase reductase Sdr
CTT30_22480	COG0433	COG0433 Predicted ATPase
CTT30_22490	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CTT30_22495	COG0210	DNA helicase
CTT30_22605	COG1192	Involved in chromosome partitioning
CTT30_22725	COG2200	EAL domain
CTT30_22765	COG3070	regulator of competence-specific genes
CTT30_22855	COG1309	transcriptional regulator
CTT30_22860	COG3119	arylsulfatase activity
CTT30_23220	COG1475	DNA binding
CTT30_23265	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone