locus-tag class description ITG08_00025 PF01266 FAD dependent oxidoreductase ITG08_00030 PF00005 ABC transporter ITG08_00030 PF03466 LysR substrate binding domain ITG08_00040 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ITG08_00050 PF03480 Bacterial extracellular solute-binding protein, family 7 ITG08_00060 PF00455 DeoR C terminal sensor domain ITG08_00060 PF08220 DeoR-like helix-turn-helix domain ITG08_00065 PF03616 Sodium/glutamate symporter ITG08_00075 PF06610 L-alanine exporter ITG08_00080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_00080 PF00512 His Kinase A (phospho-acceptor) domain ITG08_00080 PF09308 LuxQ, periplasmic ITG08_00080 PF00072 Response regulator receiver domain ITG08_00095 PF02445 Quinolinate synthetase A protein ITG08_00100 PF13174 Tetratricopeptide repeat ITG08_00100 PF16331 TolA binding protein trimerisation ITG08_00105 PF00691 OmpA family ITG08_00110 PF07676 WD40-like Beta Propeller Repeat ITG08_00110 PF04052 TolB amino-terminal domain ITG08_00120 PF02472 Biopolymer transport protein ExbD/TolR ITG08_00125 PF01618 MotA/TolQ/ExbB proton channel family ITG08_00130 PF03061 Thioesterase superfamily ITG08_00140 PF08173 Membrane bound YbgT-like protein ITG08_00145 PF02322 Cytochrome bd terminal oxidase subunit II ITG08_00150 PF01654 Cytochrome bd terminal oxidase subunit I ITG08_00155 PF17864 RuvB AAA lid domain ITG08_00155 PF05491 RuvB C-terminal winged helix domain ITG08_00155 PF05496 Holliday junction DNA helicase RuvB P-loop domain ITG08_00160 PF07499 RuvA, C-terminal domain ITG08_00160 PF01330 RuvA N terminal domain ITG08_00165 PF02075 Crossover junction endodeoxyribonuclease RuvC ITG08_00170 PF00152 tRNA synthetases class II (D, K and N) ITG08_00170 PF01336 OB-fold nucleic acid binding domain ITG08_00170 PF02938 GAD domain ITG08_00175 PF01904 Protein of unknown function DUF72 ITG08_00180 PF13649 Methyltransferase domain ITG08_00185 PF08003 Protein of unknown function (DUF1698) ITG08_00190 PF08443 RimK-like ATP-grasp domain ITG08_00190 PF18030 RimK PreATP-grasp domain ITG08_00205 PF12838 4Fe-4S dicluster domain ITG08_00205 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ITG08_00205 PF00384 Molybdopterin oxidoreductase ITG08_00205 PF01568 Molydopterin dinucleotide binding domain ITG08_00205 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ITG08_00210 PF04310 MukB N-terminal ITG08_00210 PF16330 MukB hinge domain ITG08_00215 PF04288 MukE-like family ITG08_00220 PF03882 MukF winged-helix domain ITG08_00220 PF17193 MukF C-terminal domain ITG08_00220 PF17192 MukF middle domain ITG08_00225 PF13847 Methyltransferase domain ITG08_00230 PF02698 DUF218 domain ITG08_00235 PF00072 Response regulator receiver domain ITG08_00235 PF00486 Transcriptional regulatory protein, C terminal ITG08_00240 PF02613 Nitrate reductase delta subunit ITG08_00245 PF00356 Bacterial regulatory proteins, lacI family ITG08_00250 PF04994 TfoX C-terminal domain ITG08_00250 PF04993 TfoX N-terminal domain ITG08_00270 PF00534 Glycosyl transferases group 1 ITG08_00270 PF08323 Starch synthase catalytic domain ITG08_00275 PF00483 Nucleotidyl transferase ITG08_00280 PF01396 Topoisomerase DNA binding C4 zinc finger ITG08_00280 PF08272 Topoisomerase I zinc-ribbon-like ITG08_00280 PF01131 DNA topoisomerase ITG08_00280 PF01751 Toprim domain ITG08_00285 PF10692 Protein of unknown function (DUF2498) ITG08_00290 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ITG08_00300 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ITG08_00305 PF04377 Arginine-tRNA-protein transferase, C terminus ITG08_00305 PF04376 Arginine-tRNA-protein transferase, N terminus ITG08_00310 PF01176 Translation initiation factor 1A / IF-1 ITG08_00315 PF00004 ATPase family associated with various cellular activities (AAA) ITG08_00315 PF17871 AAA lid domain ITG08_00315 PF02861 Clp amino terminal domain, pathogenicity island component ITG08_00315 PF10431 C-terminal, D2-small domain, of ClpB protein ITG08_00315 PF07724 AAA domain (Cdc48 subfamily) ITG08_00320 PF02617 ATP-dependent Clp protease adaptor protein ClpS ITG08_00325 PF00313 'Cold-shock' DNA-binding domain ITG08_00330 PF03971 Monomeric isocitrate dehydrogenase ITG08_00335 PF00849 RNA pseudouridylate synthase ITG08_00345 PF06733 DEAD_2 ITG08_00345 PF13307 Helicase C-terminal domain ITG08_00350 PF01925 Sulfite exporter TauE/SafE ITG08_00360 PF10689 Protein of unknown function (DUF2496) ITG08_00365 PF08007 Cupin superfamily protein ITG08_00370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_00370 PF02743 Cache domain ITG08_00370 PF00672 HAMP domain ITG08_00375 PF07690 Major Facilitator Superfamily ITG08_00380 PF00326 Prolyl oligopeptidase family ITG08_00380 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ITG08_00385 PF03372 Endonuclease/Exonuclease/phosphatase family ITG08_00390 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_00395 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_00400 PF00497 Bacterial extracellular solute-binding proteins, family 3 ITG08_00405 PF00005 ABC transporter ITG08_00415 PF02901 Pyruvate formate lyase-like ITG08_00415 PF01228 Glycine radical ITG08_00425 PF04055 Radical SAM superfamily ITG08_00430 PF03887 YfbU domain ITG08_00440 PF06798 PrkA serine protein kinase C-terminal domain ITG08_00440 PF08298 PrkA AAA domain ITG08_00445 PF04285 Protein of unknown function (DUF444) ITG08_00450 PF04293 SpoVR like protein ITG08_00455 PF08496 Peptidase family S49 N-terminal ITG08_00455 PF01343 Peptidase family S49 ITG08_00460 PF00106 short chain dehydrogenase ITG08_00465 PF00154 recA bacterial DNA recombination protein ITG08_00475 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ITG08_00475 PF01336 OB-fold nucleic acid binding domain ITG08_00475 PF02811 PHP domain ITG08_00475 PF14579 Helix-hairpin-helix motif ITG08_00475 PF07733 Bacterial DNA polymerase III alpha NTPase domain ITG08_00480 PF00072 Response regulator receiver domain ITG08_00480 PF01584 CheW-like domain ITG08_00485 PF00480 ROK family ITG08_00490 PF02887 Pyruvate kinase, alpha/beta domain ITG08_00490 PF00224 Pyruvate kinase, barrel domain ITG08_00495 PF01734 Patatin-like phospholipase ITG08_00515 PF02378 Phosphotransferase system, EIIC ITG08_00515 PF00367 phosphotransferase system, EIIB ITG08_00520 PF01026 TatD related DNase ITG08_00525 PF09115 DNA polymerase III, delta subunit, C terminal ITG08_00530 PF02223 Thymidylate kinase ITG08_00535 PF02618 YceG-like family ITG08_00540 PF01063 Amino-transferase class IV ITG08_00545 PF00109 Beta-ketoacyl synthase, N-terminal domain ITG08_00545 PF02801 Beta-ketoacyl synthase, C-terminal domain ITG08_00550 PF00550 Phosphopantetheine attachment site ITG08_00560 PF00698 Acyl transferase domain ITG08_00565 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ITG08_00565 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ITG08_00570 PF02504 Fatty acid synthesis protein ITG08_00575 PF01783 Ribosomal L32p protein family ITG08_00580 PF02620 Large ribosomal RNA subunit accumulation protein YceD ITG08_00585 PF02545 Maf-like protein ITG08_00590 PF01479 S4 domain ITG08_00590 PF00849 RNA pseudouridylate synthase ITG08_00595 PF12111 Polyribonucleotide phosphorylase C terminal ITG08_00595 PF00575 S1 RNA binding domain ITG08_00595 PF10150 Ribonuclease E/G family ITG08_00600 PF00916 Sulfate permease family ITG08_00600 PF01740 STAS domain ITG08_00605 PF01451 Low molecular weight phosphotyrosine protein phosphatase ITG08_00610 PF12557 Cob(I)alamin adenosyltransferase N terminal ITG08_00610 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ITG08_00615 PF05170 AsmA family ITG08_00620 PF00485 Phosphoribulokinase / Uridine kinase family ITG08_00625 PF10609 NUBPL iron-transfer P-loop NTPase ITG08_00630 PF01588 Putative tRNA binding domain ITG08_00630 PF09334 tRNA synthetases class I (M) ITG08_00640 PF07840 FadR C-terminal domain ITG08_00640 PF00392 Bacterial regulatory proteins, gntR family ITG08_00645 PF06450 Bacterial Na+/H+ antiporter B (NhaB) ITG08_00650 PF02600 Disulfide bond formation protein DsbB ITG08_00655 PF02810 SEC-C motif ITG08_00655 PF07517 SecA DEAD-like domain ITG08_00655 PF07516 SecA Wing and Scaffold domain ITG08_00655 PF01043 SecA preprotein cross-linking domain ITG08_00660 PF01207 Dihydrouridine synthase (Dus) ITG08_00665 PF05230 MASE2 domain ITG08_00665 PF00990 Diguanylate cyclase, GGDEF domain ITG08_00675 PF04217 Protein of unknown function, DUF412 ITG08_00680 PF00871 Acetokinase family ITG08_00685 PF01515 Phosphate acetyl/butaryl transferase ITG08_00685 PF07085 DRTGG domain ITG08_00690 PF13409 Glutathione S-transferase, N-terminal domain ITG08_00695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ITG08_00695 PF00005 ABC transporter ITG08_00700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ITG08_00700 PF00005 ABC transporter ITG08_00705 PF12911 N-terminal TM domain of oligopeptide transport permease C ITG08_00705 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_00710 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_00715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ITG08_00720 PF02391 MoaE protein ITG08_00725 PF02597 ThiS family ITG08_00730 PF01967 MoaC family ITG08_00735 PF00994 Probable molybdopterin binding domain ITG08_00740 PF04055 Radical SAM superfamily ITG08_00740 PF06463 Molybdenum Cofactor Synthesis C ITG08_00745 PF01933 Uncharacterised protein family UPF0052 ITG08_00750 PF01627 Hpt domain ITG08_00755 PF00072 Response regulator receiver domain ITG08_00755 PF02954 Bacterial regulatory protein, Fis family ITG08_00755 PF00158 Sigma-54 interaction domain ITG08_00760 PF00271 Helicase conserved C-terminal domain ITG08_00760 PF04851 Type III restriction enzyme, res subunit ITG08_00760 PF02151 UvrB/uvrC motif ITG08_00760 PF12344 Ultra-violet resistance protein B ITG08_00760 PF17757 UvrB interaction domain ITG08_00775 PF16874 Glycosyl hydrolase family 36 C-terminal domain ITG08_00775 PF16875 Glycosyl hydrolase family 36 N-terminal domain ITG08_00780 PF02264 LamB porin ITG08_00790 PF02837 Glycosyl hydrolases family 2, sugar binding domain ITG08_00790 PF00703 Glycosyl hydrolases family 2 ITG08_00790 PF16353 Domain of unknown function(DUF4981) ITG08_00790 PF02929 Beta galactosidase small chain ITG08_00790 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ITG08_00795 PF00356 Bacterial regulatory proteins, lacI family ITG08_00800 PF02508 Rnf-Nqr subunit, membrane protein ITG08_00805 PF04060 Putative Fe-S cluster ITG08_00810 PF10531 SLBB domain ITG08_00810 PF13375 RnfC Barrel sandwich hybrid domain ITG08_00810 PF12838 4Fe-4S dicluster domain ITG08_00810 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ITG08_00815 PF03116 NQR2, RnfD, RnfE family ITG08_00820 PF04205 FMN-binding domain ITG08_00825 PF02508 Rnf-Nqr subunit, membrane protein ITG08_00830 PF00633 Helix-hairpin-helix motif ITG08_00830 PF10576 Iron-sulfur binding domain of endonuclease III ITG08_00830 PF00730 HhH-GPD superfamily base excision DNA repair protein ITG08_00835 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ITG08_00840 PF10952 Protein of unknown function (DUF2753) ITG08_00845 PF00691 OmpA family ITG08_00845 PF18393 MotY N-terminal domain ITG08_00850 PF00929 Exonuclease ITG08_00855 PF13726 Na+-H+ antiporter family ITG08_00855 PF03553 Na+/H+ antiporter family ITG08_00865 PF00462 Glutaredoxin ITG08_00870 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ITG08_00870 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ITG08_00885 PF00171 Aldehyde dehydrogenase family ITG08_00885 PF00465 Iron-containing alcohol dehydrogenase ITG08_00890 PF01914 MarC family integral membrane protein ITG08_00895 PF00027 Cyclic nucleotide-binding domain ITG08_00895 PF00520 Ion transport protein ITG08_00900 PF01118 Semialdehyde dehydrogenase, NAD binding domain ITG08_00900 PF02774 Semialdehyde dehydrogenase, dimerisation domain ITG08_00905 PF03553 Na+/H+ antiporter family ITG08_00920 PF04245 37-kD nucleoid-associated bacterial protein ITG08_00925 PF07208 Protein of unknown function (DUF1414) ITG08_00930 PF00884 Sulfatase ITG08_00930 PF11893 Domain of unknown function (DUF3413) ITG08_00955 PF00589 Phage integrase family ITG08_00955 PF14659 Phage integrase, N-terminal SAM-like domain ITG08_00980 PF02743 Cache domain ITG08_00980 PF00672 HAMP domain ITG08_00980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_01010 PF00672 HAMP domain ITG08_01010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_01010 PF00512 His Kinase A (phospho-acceptor) domain ITG08_01010 PF16527 Two-component sensor protein CpxA, periplasmic domain ITG08_01065 PF13737 Transposase DDE domain ITG08_01080 PF13737 Transposase DDE domain ITG08_01100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_01105 PF00850 Histone deacetylase domain ITG08_01110 PF00106 short chain dehydrogenase ITG08_01120 PF01751 Toprim domain ITG08_01120 PF01131 DNA topoisomerase ITG08_01125 PF00881 Nitroreductase family ITG08_01130 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ITG08_01130 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG08_01135 PF01343 Peptidase family S49 ITG08_01140 PF17763 Glutaminase/Asparaginase C-terminal domain ITG08_01140 PF00710 Asparaginase, N-terminal ITG08_01145 PF07023 Protein of unknown function (DUF1315) ITG08_01155 PF01641 SelR domain ITG08_01160 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ITG08_01160 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ITG08_01165 PF01263 Aldose 1-epimerase ITG08_01170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_01170 PF08447 PAS fold ITG08_01170 PF13426 PAS domain ITG08_01175 PF13847 Methyltransferase domain ITG08_01190 PF02028 BCCT, betaine/carnitine/choline family transporter ITG08_01195 PF00245 Alkaline phosphatase ITG08_01200 PF03692 Putative zinc- or iron-chelating domain ITG08_01205 PF03692 Putative zinc- or iron-chelating domain ITG08_01210 PF00230 Major intrinsic protein ITG08_01215 PF02132 RecR protein ITG08_01215 PF13662 Toprim domain ITG08_01220 PF02575 YbaB/EbfC DNA-binding family ITG08_01225 PF12170 DNA polymerase III tau subunit V interacting with alpha ITG08_01225 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ITG08_01225 PF12169 DNA polymerase III subunits gamma and tau domain III ITG08_01230 PF00156 Phosphoribosyl transferase domain ITG08_01235 PF04304 Protein of unknown function (DUF454) ITG08_01245 PF00072 Response regulator receiver domain ITG08_01250 PF03466 LysR substrate binding domain ITG08_01250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_01255 PF00156 Phosphoribosyl transferase domain ITG08_01260 PF02674 Colicin V production protein ITG08_01265 PF05036 Sporulation related domain ITG08_01270 PF08245 Mur ligase middle domain ITG08_01270 PF02875 Mur ligase family, glutamate ligase domain ITG08_01275 PF17848 Acetyl-coA carboxylase zinc finger domain ITG08_01275 PF01039 Carboxyl transferase domain ITG08_01280 PF01416 tRNA pseudouridine synthase ITG08_01290 PF02774 Semialdehyde dehydrogenase, dimerisation domain ITG08_01290 PF01118 Semialdehyde dehydrogenase, NAD binding domain ITG08_01295 PF11890 Domain of unknown function (DUF3410) ITG08_01295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ITG08_01295 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ITG08_01300 PF02801 Beta-ketoacyl synthase, C-terminal domain ITG08_01300 PF00109 Beta-ketoacyl synthase, N-terminal domain ITG08_01305 PF01266 FAD dependent oxidoreductase ITG08_01305 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ITG08_01310 PF03358 NADPH-dependent FMN reductase ITG08_01315 PF08891 YfcL protein ITG08_01320 PF04315 Elongation factor P hydroxylase ITG08_01325 PF03458 UPF0126 domain ITG08_01330 PF01264 Chorismate synthase ITG08_01340 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ITG08_01340 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ITG08_01350 PF07670 Nucleoside recognition ITG08_01350 PF01773 Na+ dependent nucleoside transporter N-terminus ITG08_01350 PF07662 Na+ dependent nucleoside transporter C-terminus ITG08_01355 PF03466 LysR substrate binding domain ITG08_01355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_01360 PF13406 Transglycosylase SLT domain ITG08_01365 PF05166 YcgL domain ITG08_01370 PF03775 Septum formation inhibitor MinC, C-terminal domain ITG08_01370 PF05209 Septum formation inhibitor MinC, N-terminal domain ITG08_01375 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ITG08_01380 PF03776 Septum formation topological specificity factor MinE ITG08_01385 PF01612 3'-5' exonuclease ITG08_01385 PF00570 HRDC domain ITG08_01390 PF00501 AMP-binding enzyme ITG08_01390 PF13193 AMP-binding enzyme C-terminal domain ITG08_01395 PF00561 alpha/beta hydrolase fold ITG08_01410 PF00814 Glycoprotease family ITG08_01415 PF13307 Helicase C-terminal domain ITG08_01415 PF04851 Type III restriction enzyme, res subunit ITG08_01425 PF00551 Formyl transferase ITG08_01425 PF01842 ACT domain ITG08_01430 PF06185 YecM protein ITG08_01435 PF05746 DALR anticodon binding domain ITG08_01435 PF00750 tRNA synthetases class I (R) ITG08_01435 PF03485 Arginyl tRNA synthetase N terminal domain ITG08_01450 PF07664 Ferrous iron transport protein B C terminus ITG08_01450 PF07670 Nucleoside recognition ITG08_01450 PF02421 Ferrous iron transport protein B ITG08_01455 PF04023 FeoA domain ITG08_01460 PF12833 Helix-turn-helix domain ITG08_01465 PF01297 Zinc-uptake complex component A periplasmic ITG08_01470 PF00005 ABC transporter ITG08_01475 PF00950 ABC 3 transport family ITG08_01480 PF02629 CoA binding domain ITG08_01480 PF00549 CoA-ligase ITG08_01485 PF08442 ATP-grasp domain ITG08_01485 PF00549 CoA-ligase ITG08_01490 PF00364 Biotin-requiring enzyme ITG08_01490 PF02817 e3 binding domain ITG08_01490 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ITG08_01495 PF02779 Transketolase, pyrimidine binding domain ITG08_01495 PF16870 2-oxoglutarate dehydrogenase C-terminal ITG08_01495 PF00676 Dehydrogenase E1 component ITG08_01495 PF16078 2-oxoglutarate dehydrogenase N-terminus ITG08_01500 PF13085 2Fe-2S iron-sulfur cluster binding domain ITG08_01505 PF00890 FAD binding domain ITG08_01505 PF02910 Fumarate reductase flavoprotein C-term ITG08_01510 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ITG08_01515 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ITG08_01520 PF00285 Citrate synthase, C-terminal domain ITG08_01525 PF01784 NIF3 (NGG1p interacting factor 3) ITG08_01535 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ITG08_01535 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ITG08_01535 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ITG08_01535 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ITG08_01540 PF17206 SeqA protein N-terminal domain ITG08_01540 PF03925 SeqA protein C-terminal domain ITG08_01545 PF12697 Alpha/beta hydrolase family ITG08_01555 PF00258 Flavodoxin ITG08_01565 PF01475 Ferric uptake regulator family ITG08_01570 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ITG08_01570 PF00749 tRNA synthetases class I (E and Q), catalytic domain ITG08_01575 PF00367 phosphotransferase system, EIIB ITG08_01575 PF02378 Phosphotransferase system, EIIC ITG08_01575 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ITG08_01580 PF01979 Amidohydrolase family ITG08_01585 PF01047 MarR family ITG08_01585 PF00480 ROK family ITG08_01590 PF00999 Sodium/hydrogen exchanger family ITG08_01590 PF02254 TrkA-N domain ITG08_01595 PF00733 Asparagine synthase ITG08_01595 PF13537 Glutamine amidotransferase domain ITG08_01605 PF00854 POT family ITG08_01610 PF00762 Ferrochelatase ITG08_01615 PF05191 Adenylate kinase, active site lid ITG08_01620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_01620 PF00183 Hsp90 protein ITG08_01625 PF00486 Transcriptional regulatory protein, C terminal ITG08_01630 PF17323 Trans-membrane regulatory protein ToxS ITG08_01640 PF12850 Calcineurin-like phosphoesterase superfamily domain ITG08_01655 PF07556 Protein of unknown function (DUF1538) ITG08_01660 PF07556 Protein of unknown function (DUF1538) ITG08_01665 PF01370 NAD dependent epimerase/dehydratase family ITG08_01665 PF08338 Domain of unknown function (DUF1731) ITG08_01670 PF00106 short chain dehydrogenase ITG08_01675 PF00085 Thioredoxin ITG08_01680 PF01145 SPFH domain / Band 7 family ITG08_01680 PF16200 C-terminal region of band_7 ITG08_01690 PF13411 MerR HTH family regulatory protein ITG08_01705 PF03573 outer membrane porin, OprD family ITG08_01710 PF01653 NAD-dependent DNA ligase adenylation domain ITG08_01710 PF03120 NAD-dependent DNA ligase OB-fold domain ITG08_01710 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ITG08_01710 PF12826 Helix-hairpin-helix motif ITG08_01710 PF00533 BRCA1 C Terminus (BRCT) domain ITG08_01715 PF04354 ZipA, C-terminal FtsZ-binding domain ITG08_01725 PF00291 Pyridoxal-phosphate dependent enzyme ITG08_01730 PF00381 PTS HPr component phosphorylation site ITG08_01735 PF05524 PEP-utilising enzyme, N-terminal ITG08_01735 PF00391 PEP-utilising enzyme, mobile domain ITG08_01735 PF02896 PEP-utilising enzyme, TIM barrel domain ITG08_01740 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ITG08_01745 PF00669 Bacterial flagellin N-terminal helical region ITG08_01745 PF07196 Flagellin hook IN motif ITG08_01745 PF00700 Bacterial flagellin C-terminal helical region ITG08_01750 PF00700 Bacterial flagellin C-terminal helical region ITG08_01750 PF07196 Flagellin hook IN motif ITG08_01750 PF00669 Bacterial flagellin N-terminal helical region ITG08_01755 PF04261 Dyp-type peroxidase family ITG08_01760 PF11143 Protein of unknown function (DUF2919) ITG08_01780 PF03960 ArsC family ITG08_01785 PF07687 Peptidase dimerisation domain ITG08_01785 PF01546 Peptidase family M20/M25/M40 ITG08_01800 PF06804 NlpB/DapX lipoprotein ITG08_01805 PF00701 Dihydrodipicolinate synthetase family ITG08_01810 PF01842 ACT domain ITG08_01840 PF00578 AhpC/TSA family ITG08_01890 PF02463 RecF/RecN/SMC N terminal domain ITG08_01910 PF02899 Phage integrase, N-terminal SAM-like domain ITG08_01910 PF00589 Phage integrase family ITG08_01930 PF00578 AhpC/TSA family ITG08_01935 PF01594 AI-2E family transporter ITG08_01945 PF13181 Tetratricopeptide repeat ITG08_01945 PF01435 Peptidase family M48 ITG08_01950 PF03960 ArsC family ITG08_01955 PF03358 NADPH-dependent FMN reductase ITG08_01970 PF00860 Permease family ITG08_01980 PF00586 AIR synthase related protein, N-terminal domain ITG08_01980 PF02769 AIR synthase related protein, C-terminal domain ITG08_01985 PF00551 Formyl transferase ITG08_01990 PF13230 Glutamine amidotransferases class-II ITG08_01995 PF13580 SIS domain ITG08_02000 PF02770 Acyl-CoA dehydrogenase, middle domain ITG08_02000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ITG08_02000 PF09317 Domain of unknown function (DUF1974) ITG08_02000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ITG08_02010 PF00929 Exonuclease ITG08_02015 PF00075 RNase H ITG08_02020 PF08241 Methyltransferase domain ITG08_02025 PF00753 Metallo-beta-lactamase superfamily ITG08_02025 PF16123 Hydroxyacylglutathione hydrolase C-terminus ITG08_02030 PF01464 Transglycosylase SLT domain ITG08_02030 PF01476 LysM domain ITG08_02040 PF03372 Endonuclease/Exonuclease/phosphatase family ITG08_02045 PF00543 Nitrogen regulatory protein P-II ITG08_02050 PF00034 Cytochrome c ITG08_02055 PF11734 TilS substrate C-terminal domain ITG08_02055 PF09179 TilS substrate binding domain ITG08_02055 PF01171 PP-loop family ITG08_02060 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ITG08_02065 PF01336 OB-fold nucleic acid binding domain ITG08_02065 PF02811 PHP domain ITG08_02065 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ITG08_02065 PF07733 Bacterial DNA polymerase III alpha NTPase domain ITG08_02065 PF14579 Helix-hairpin-helix motif ITG08_02070 PF01351 Ribonuclease HII ITG08_02075 PF02684 Lipid-A-disaccharide synthetase ITG08_02080 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ITG08_02080 PF00132 Bacterial transferase hexapeptide (six repeats) ITG08_02085 PF07977 FabA-like domain ITG08_02090 PF00132 Bacterial transferase hexapeptide (six repeats) ITG08_02090 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ITG08_02095 PF03938 Outer membrane protein (OmpH-like) ITG08_02100 PF07244 Surface antigen variable number repeat ITG08_02100 PF01103 Surface antigen ITG08_02105 PF17820 PDZ domain ITG08_02105 PF02163 Peptidase family M50 ITG08_02110 PF13288 DXP reductoisomerase C-terminal domain ITG08_02110 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ITG08_02110 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ITG08_02120 PF01255 Putative undecaprenyl diphosphate synthase ITG08_02125 PF01765 Ribosome recycling factor ITG08_02130 PF00696 Amino acid kinase family ITG08_02135 PF00889 Elongation factor TS ITG08_02140 PF00318 Ribosomal protein S2 ITG08_02145 PF00557 Metallopeptidase family M24 ITG08_02150 PF01842 ACT domain ITG08_02150 PF08335 GlnD PII-uridylyltransferase ITG08_02150 PF01966 HD domain ITG08_02150 PF01909 Nucleotidyltransferase domain ITG08_02155 PF11944 Protein of unknown function (DUF3461) ITG08_02160 PF00849 RNA pseudouridylate synthase ITG08_02165 PF04287 tRNA pseudouridine synthase C ITG08_02190 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ITG08_02200 PF03806 AbgT putative transporter family ITG08_02205 PF00444 Ribosomal protein L36 ITG08_02210 PF01197 Ribosomal protein L31 ITG08_02215 PF01980 tRNA-methyltransferase O ITG08_02215 PF18389 TrmO C-terminal domain ITG08_02220 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ITG08_02220 PF03129 Anticodon binding domain ITG08_02220 PF04073 Aminoacyl-tRNA editing domain ITG08_02230 PF06786 Uncharacterised protein family (UPF0253) ITG08_02245 PF00464 Serine hydroxymethyltransferase ITG08_02250 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ITG08_02250 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ITG08_02255 PF00128 Alpha amylase, catalytic domain ITG08_02255 PF16657 Maltogenic Amylase, C-terminal domain ITG08_02260 PF00367 phosphotransferase system, EIIB ITG08_02260 PF02378 Phosphotransferase system, EIIC ITG08_02265 PF00356 Bacterial regulatory proteins, lacI family ITG08_02280 PF00005 ABC transporter ITG08_02280 PF09383 NIL domain ITG08_02285 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_02290 PF03180 NLPA lipoprotein ITG08_02295 PF02264 LamB porin ITG08_02300 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) ITG08_02305 PF07348 Syd protein (SUKH-2) ITG08_02310 PF14489 QueF-like protein ITG08_02310 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ITG08_02320 PF00990 Diguanylate cyclase, GGDEF domain ITG08_02325 PF03641 Possible lysine decarboxylase ITG08_02325 PF11892 Domain of unknown function (DUF3412) ITG08_02325 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ITG08_02330 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ITG08_02330 PF01367 5'-3' exonuclease, C-terminal SAM fold ITG08_02335 PF01728 FtsJ-like methyltransferase ITG08_02335 PF18125 RlmM ferredoxin-like domain ITG08_02350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_02350 PF03466 LysR substrate binding domain ITG08_02355 PF02568 Thiamine biosynthesis protein (ThiI) ITG08_02355 PF02926 THUMP domain ITG08_02360 PF00691 OmpA family ITG08_02360 PF13677 Membrane MotB of proton-channel complex MotA/MotB ITG08_02365 PF01618 MotA/TolQ/ExbB proton channel family ITG08_02370 PF02609 Exonuclease VII small subunit ITG08_02375 PF00348 Polyprenyl synthetase ITG08_02380 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ITG08_02380 PF02780 Transketolase, C-terminal domain ITG08_02380 PF02779 Transketolase, pyrimidine binding domain ITG08_02390 PF04608 Phosphatidylglycerophosphatase A ITG08_02395 PF02769 AIR synthase related protein, C-terminal domain ITG08_02395 PF00586 AIR synthase related protein, N-terminal domain ITG08_02400 PF01029 NusB family ITG08_02405 PF00885 6,7-dimethyl-8-ribityllumazine synthase ITG08_02410 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ITG08_02410 PF00925 GTP cyclohydrolase II ITG08_02415 PF00677 Lumazine binding domain ITG08_02420 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ITG08_02420 PF01872 RibD C-terminal domain ITG08_02425 PF03477 ATP cone domain ITG08_02430 PF00171 Aldehyde dehydrogenase family ITG08_02435 PF00696 Amino acid kinase family ITG08_02435 PF01472 PUA domain ITG08_02440 PF07417 Sigma factor-binding transcriptional regulator Crl ITG08_02445 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) ITG08_02450 PF00156 Phosphoribosyl transferase domain ITG08_02455 PF00860 Permease family ITG08_02460 PF01546 Peptidase family M20/M25/M40 ITG08_02460 PF07687 Peptidase dimerisation domain ITG08_02480 PF00962 Adenosine/AMP deaminase ITG08_02500 PF00356 Bacterial regulatory proteins, lacI family ITG08_02505 PF01263 Aldose 1-epimerase ITG08_02510 PF10509 Galactokinase galactose-binding signature ITG08_02510 PF08544 GHMP kinases C terminal ITG08_02510 PF00288 GHMP kinases N terminal domain ITG08_02515 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ITG08_02515 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ITG08_02520 PF16363 GDP-mannose 4,6 dehydratase ITG08_02525 PF00356 Bacterial regulatory proteins, lacI family ITG08_02530 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ITG08_02530 PF16353 Domain of unknown function(DUF4981) ITG08_02530 PF02929 Beta galactosidase small chain ITG08_02530 PF02837 Glycosyl hydrolases family 2, sugar binding domain ITG08_02530 PF00703 Glycosyl hydrolases family 2 ITG08_02540 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_02545 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_02550 PF00005 ABC transporter ITG08_02550 PF17912 MalK OB fold domain ITG08_02555 PF01554 MatE ITG08_02560 PF00474 Sodium:solute symporter family ITG08_02565 PF16874 Glycosyl hydrolase family 36 C-terminal domain ITG08_02565 PF16875 Glycosyl hydrolase family 36 N-terminal domain ITG08_02570 PF00356 Bacterial regulatory proteins, lacI family ITG08_02575 PF03466 LysR substrate binding domain ITG08_02575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_02580 PF02417 Chromate transporter ITG08_02585 PF01209 ubiE/COQ5 methyltransferase family ITG08_02615 PF00437 Type II/IV secretion system protein ITG08_02645 PF04972 BON domain ITG08_02645 PF00263 Bacterial type II and III secretion system protein ITG08_02645 PF13629 Pilus formation protein N terminal region ITG08_02670 PF02311 AraC-like ligand binding domain ITG08_02670 PF12833 Helix-turn-helix domain ITG08_02675 PF00501 AMP-binding enzyme ITG08_02690 PF03466 LysR substrate binding domain ITG08_02690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_02695 PF09905 DNA-binding protein VF530 ITG08_02725 PF03764 Elongation factor G, domain IV ITG08_02725 PF14492 Elongation Factor G, domain II ITG08_02725 PF00679 Elongation factor G C-terminus ITG08_02725 PF00009 Elongation factor Tu GTP binding domain ITG08_02725 PF03144 Elongation factor Tu domain 2 ITG08_02730 PF18073 Rubredoxin metal binding domain ITG08_02740 PF18429 Domain of unknown function (DUF5609) ITG08_02750 PF01048 Phosphorylase superfamily ITG08_02755 PF01676 Metalloenzyme superfamily ITG08_02760 PF02885 Glycosyl transferase family, helical bundle domain ITG08_02760 PF00591 Glycosyl transferase family, a/b domain ITG08_02760 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ITG08_02765 PF01791 DeoC/LacD family aldolase ITG08_02770 PF01773 Na+ dependent nucleoside transporter N-terminus ITG08_02770 PF07662 Na+ dependent nucleoside transporter C-terminus ITG08_02770 PF07670 Nucleoside recognition ITG08_02775 PF01026 TatD related DNase ITG08_02780 PF00009 Elongation factor Tu GTP binding domain ITG08_02780 PF03144 Elongation factor Tu domain 2 ITG08_02780 PF16658 Class II release factor RF3, C-terminal domain ITG08_02785 PF00583 Acetyltransferase (GNAT) family ITG08_02795 PF13508 Acetyltransferase (GNAT) domain ITG08_02800 PF02036 SCP-2 sterol transfer family ITG08_02805 PF00990 Diguanylate cyclase, GGDEF domain ITG08_02805 PF03707 Bacterial signalling protein N terminal repeat ITG08_02805 PF00563 EAL domain ITG08_02810 PF01136 Peptidase family U32 ITG08_02815 PF01136 Peptidase family U32 ITG08_02820 PF01554 MatE ITG08_02830 PF13181 Tetratricopeptide repeat ITG08_02830 PF07719 Tetratricopeptide repeat ITG08_02835 PF03725 3' exoribonuclease family, domain 2 ITG08_02835 PF01138 3' exoribonuclease family, domain 1 ITG08_02835 PF00575 S1 RNA binding domain ITG08_02835 PF00013 KH domain ITG08_02835 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ITG08_02840 PF00312 Ribosomal protein S15 ITG08_02845 PF09157 Pseudouridine synthase II TruB, C-terminal ITG08_02845 PF16198 tRNA pseudouridylate synthase B C-terminal domain ITG08_02845 PF01509 TruB family pseudouridylate synthase (N terminal domain) ITG08_02850 PF02033 Ribosome-binding factor A ITG08_02855 PF08364 Bacterial translation initiation factor IF-2 associated region ITG08_02855 PF00009 Elongation factor Tu GTP binding domain ITG08_02855 PF11987 Translation-initiation factor 2 ITG08_02855 PF04760 Translation initiation factor IF-2, N-terminal region ITG08_02860 PF00575 S1 RNA binding domain ITG08_02860 PF08529 NusA N-terminal domain ITG08_02860 PF13184 NusA-like KH domain ITG08_02865 PF02576 RimP N-terminal domain ITG08_02865 PF17384 RimP C-terminal SH3 domain ITG08_02880 PF03840 Preprotein translocase SecG subunit ITG08_02885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ITG08_02885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ITG08_02885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ITG08_02885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ITG08_02890 PF00809 Pterin binding enzyme ITG08_02895 PF06480 FtsH Extracellular ITG08_02895 PF17862 AAA+ lid domain ITG08_02895 PF01434 Peptidase family M41 ITG08_02895 PF00004 ATPase family associated with various cellular activities (AAA) ITG08_02900 PF01728 FtsJ-like methyltransferase ITG08_02905 PF01985 CRS1 / YhbY (CRM) domain ITG08_02910 PF01272 Transcription elongation factor, GreA/GreB, C-term ITG08_02910 PF03449 Transcription elongation factor, N-terminal ITG08_02915 PF13609 Gram-negative porin ITG08_02920 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ITG08_02925 PF03448 MgtE intracellular N domain ITG08_02925 PF00571 CBS domain ITG08_02925 PF01769 Divalent cation transporter ITG08_02930 PF00579 tRNA synthetases class I (W and Y) ITG08_02935 PF01476 LysM domain ITG08_02935 PF08525 Opacity-associated protein A N-terminal motif ITG08_02935 PF01551 Peptidase family M23 ITG08_02940 PF00873 AcrB/AcrD/AcrF family ITG08_02950 PF01521 Iron-sulphur cluster biosynthesis ITG08_02955 PF00202 Aminotransferase class-III ITG08_02960 PF01594 AI-2E family transporter ITG08_02965 PF05175 Methyltransferase small domain ITG08_02965 PF08468 Methyltransferase small domain N-terminal ITG08_02970 PF09308 LuxQ, periplasmic ITG08_02970 PF00512 His Kinase A (phospho-acceptor) domain ITG08_02970 PF00072 Response regulator receiver domain ITG08_02970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_02975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ITG08_02980 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_02985 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_02985 PF12911 N-terminal TM domain of oligopeptide transport permease C ITG08_02990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ITG08_02990 PF00005 ABC transporter ITG08_02995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ITG08_02995 PF00005 ABC transporter ITG08_03005 PF01869 BadF/BadG/BcrA/BcrD ATPase family ITG08_03010 PF02838 Glycosyl hydrolase family 20, domain 2 ITG08_03010 PF00728 Glycosyl hydrolase family 20, catalytic domain ITG08_03015 PF06165 Glycosyltransferase family 36 ITG08_03015 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ITG08_03020 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ITG08_03020 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ITG08_03020 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ITG08_03020 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ITG08_03025 PF00005 ABC transporter ITG08_03025 PF08402 TOBE domain ITG08_03035 PF13416 Bacterial extracellular solute-binding protein ITG08_03040 PF00909 Ammonium Transporter Family ITG08_03045 PF00543 Nitrogen regulatory protein P-II ITG08_03050 PF06062 Uncharacterised protein family (UPF0231) ITG08_03055 PF00330 Aconitase family (aconitate hydratase) ITG08_03055 PF11791 Aconitate B N-terminal domain ITG08_03055 PF06434 Aconitate hydratase 2 N-terminus ITG08_03060 PF01734 Patatin-like phospholipase ITG08_03065 PF00905 Penicillin binding protein transpeptidase domain ITG08_03065 PF00912 Transglycosylase ITG08_03065 PF14814 Bifunctional transglycosylase second domain ITG08_03070 PF04408 Helicase associated domain (HA2) ITG08_03070 PF00271 Helicase conserved C-terminal domain ITG08_03070 PF08482 ATP-dependent helicase C-terminal ITG08_03070 PF00270 DEAD/DEAH box helicase ITG08_03075 PF03749 Sugar fermentation stimulation protein RE domain ITG08_03075 PF17746 SfsA N-terminal OB domain ITG08_03080 PF01258 Prokaryotic dksA/traR C4-type zinc finger ITG08_03085 PF00749 tRNA synthetases class I (E and Q), catalytic domain ITG08_03090 PF12627 Probable RNA and SrmB- binding site of polymerase A ITG08_03090 PF12626 Polymerase A arginine-rich C-terminus ITG08_03090 PF01743 Poly A polymerase head domain ITG08_03095 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ITG08_03100 PF02548 Ketopantoate hydroxymethyltransferase ITG08_03105 PF02569 Pantoate-beta-alanine ligase ITG08_03110 PF01061 ABC-2 type transporter ITG08_03115 PF00005 ABC transporter ITG08_03120 PF01740 STAS domain ITG08_03120 PF00916 Sulfate permease family ITG08_03125 PF00484 Carbonic anhydrase ITG08_03130 PF00156 Phosphoribosyl transferase domain ITG08_03135 PF00440 Bacterial regulatory proteins, tetR family ITG08_03140 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG08_03140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ITG08_03145 PF02817 e3 binding domain ITG08_03145 PF00364 Biotin-requiring enzyme ITG08_03145 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ITG08_03150 PF00456 Transketolase, thiamine diphosphate binding domain ITG08_03150 PF17831 Pyruvate dehydrogenase E1 component middle domain ITG08_03155 PF07729 FCD domain ITG08_03155 PF00392 Bacterial regulatory proteins, gntR family ITG08_03160 PF01510 N-acetylmuramoyl-L-alanine amidase ITG08_03165 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ITG08_03165 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ITG08_03170 PF07963 Prokaryotic N-terminal methylation motif ITG08_03170 PF00114 Pilin (bacterial filament) ITG08_03175 PF00437 Type II/IV secretion system protein ITG08_03175 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ITG08_03180 PF00482 Type II secretion system (T2SS), protein F ITG08_03185 PF01478 Type IV leader peptidase family ITG08_03185 PF06750 Bacterial Peptidase A24 N-terminal domain ITG08_03190 PF01121 Dephospho-CoA kinase ITG08_03195 PF07072 Cell division protein ITG08_03200 PF03884 DNA gyrase inhibitor YacG ITG08_03205 PF01245 Ribosomal protein L19 ITG08_03210 PF01746 tRNA (Guanine-1)-methyltransferase ITG08_03215 PF05239 PRC-barrel domain ITG08_03215 PF01782 RimM N-terminal domain ITG08_03220 PF00886 Ribosomal protein S16 ITG08_03225 PF00448 SRP54-type protein, GTPase domain ITG08_03225 PF02978 Signal peptide binding domain ITG08_03225 PF02881 SRP54-type protein, helical bundle domain ITG08_03230 PF01578 Cytochrome C assembly protein ITG08_03235 PF03471 Transporter associated domain ITG08_03235 PF00571 CBS domain ITG08_03235 PF01595 Cyclin M transmembrane N-terminal domain ITG08_03240 PF02664 S-Ribosylhomocysteinase (LuxS) ITG08_03250 PF04262 Glutamate-cysteine ligase ITG08_03255 PF00675 Insulinase (Peptidase family M16) ITG08_03255 PF05193 Peptidase M16 inactive domain ITG08_03260 PF09335 SNARE associated Golgi protein ITG08_03265 PF00107 Zinc-binding dehydrogenase ITG08_03265 PF08240 Alcohol dehydrogenase GroES-like domain ITG08_03270 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit ITG08_03275 PF00682 HMGL-like ITG08_03275 PF00364 Biotin-requiring enzyme ITG08_03275 PF02436 Conserved carboxylase domain ITG08_03280 PF04277 Oxaloacetate decarboxylase, gamma chain ITG08_03335 PF02599 Global regulator protein family ITG08_03340 PF01842 ACT domain ITG08_03340 PF13840 ACT domain ITG08_03340 PF00696 Amino acid kinase family ITG08_03345 PF02272 DHHA1 domain ITG08_03345 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ITG08_03345 PF01411 tRNA synthetases class II (A) ITG08_03350 PF00154 recA bacterial DNA recombination protein ITG08_03355 PF02464 Competence-damaged protein ITG08_03360 PF05188 MutS domain II ITG08_03360 PF01624 MutS domain I ITG08_03360 PF00488 MutS domain V ITG08_03360 PF05190 MutS family domain IV ITG08_03360 PF05192 MutS domain III ITG08_03365 PF00140 Sigma-70 factor, region 1.2 ITG08_03365 PF04542 Sigma-70 region 2 ITG08_03365 PF04539 Sigma-70 region 3 ITG08_03365 PF04545 Sigma-70, region 4 ITG08_03370 PF01476 LysM domain ITG08_03370 PF01551 Peptidase family M23 ITG08_03380 PF01975 Survival protein SurE ITG08_03385 PF01142 tRNA pseudouridine synthase D (TruD) ITG08_03390 PF02542 YgbB family ITG08_03395 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ITG08_03400 PF04977 Septum formation initiator ITG08_03405 PF00113 Enolase, C-terminal TIM barrel domain ITG08_03405 PF03952 Enolase, N-terminal domain ITG08_03410 PF06418 CTP synthase N-terminus ITG08_03410 PF00117 Glutamine amidotransferase class-I ITG08_03415 PF03819 MazG nucleotide pyrophosphohydrolase domain ITG08_03420 PF13291 ACT domain ITG08_03420 PF04607 Region found in RelA / SpoT proteins ITG08_03420 PF02824 TGS domain ITG08_03425 PF01938 TRAM domain ITG08_03425 PF05958 tRNA (Uracil-5-)-methyltransferase ITG08_03430 PF00672 HAMP domain ITG08_03430 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ITG08_03430 PF00512 His Kinase A (phospho-acceptor) domain ITG08_03430 PF01627 Hpt domain ITG08_03430 PF00072 Response regulator receiver domain ITG08_03430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_03435 PF01648 4'-phosphopantetheinyl transferase superfamily ITG08_03440 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ITG08_03445 PF11967 Recombination protein O N terminal ITG08_03445 PF02565 Recombination protein O C terminal ITG08_03450 PF01926 50S ribosome-binding GTPase ITG08_03450 PF07650 KH domain ITG08_03455 PF14622 Ribonuclease-III-like ITG08_03455 PF00035 Double-stranded RNA binding motif ITG08_03460 PF10502 Signal peptidase, peptidase S26 ITG08_03465 PF00679 Elongation factor G C-terminus ITG08_03465 PF06421 GTP-binding protein LepA C-terminus ITG08_03465 PF03144 Elongation factor Tu domain 2 ITG08_03465 PF00009 Elongation factor Tu GTP binding domain ITG08_03475 PF17188 MucB/RseB C-terminal domain ITG08_03475 PF03888 MucB/RseB N-terminal domain ITG08_03480 PF03872 Anti sigma-E protein RseA, N-terminal domain ITG08_03480 PF03873 Anti sigma-E protein RseA, C-terminal domain ITG08_03485 PF04542 Sigma-70 region 2 ITG08_03485 PF08281 Sigma-70, region 4 ITG08_03490 PF00890 FAD binding domain ITG08_03490 PF02910 Fumarate reductase flavoprotein C-term ITG08_03495 PF03937 Flavinator of succinate dehydrogenase ITG08_03515 PF01494 FAD binding domain ITG08_03520 PF01494 FAD binding domain ITG08_03525 PF03695 Uncharacterised protein family (UPF0149) ITG08_03530 PF05164 Cell division protein ZapA ITG08_03540 PF01812 5-formyltetrahydrofolate cyclo-ligase family ITG08_03545 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ITG08_03550 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ITG08_03550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ITG08_03550 PF01842 ACT domain ITG08_03560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_03560 PF03466 LysR substrate binding domain ITG08_03565 PF01810 LysE type translocator ITG08_03570 PF00924 Mechanosensitive ion channel ITG08_03570 PF05552 Conserved TM helix ITG08_03575 PF01116 Fructose-bisphosphate aldolase class-II ITG08_03580 PF00162 Phosphoglycerate kinase ITG08_03585 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ITG08_03585 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ITG08_03590 PF02779 Transketolase, pyrimidine binding domain ITG08_03590 PF02780 Transketolase, C-terminal domain ITG08_03590 PF00456 Transketolase, thiamine diphosphate binding domain ITG08_03595 PF02773 S-adenosylmethionine synthetase, C-terminal domain ITG08_03595 PF02772 S-adenosylmethionine synthetase, central domain ITG08_03595 PF00438 S-adenosylmethionine synthetase, N-terminal domain ITG08_03605 PF10263 SprT-like family ITG08_03605 PF17283 SprT-like zinc ribbon domain ITG08_03610 PF04231 Endonuclease I ITG08_03615 PF04452 RNA methyltransferase ITG08_03620 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ITG08_03620 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ITG08_03625 PF02622 Uncharacterized ACR, COG1678 ITG08_03630 PF03652 Holliday junction resolvase ITG08_03640 PF00437 Type II/IV secretion system protein ITG08_03645 PF00437 Type II/IV secretion system protein ITG08_03650 PF01168 Alanine racemase, N-terminal domain ITG08_03655 PF03807 NADP oxidoreductase coenzyme F420-dependent ITG08_03655 PF14748 Pyrroline-5-carboxylate reductase dimerisation ITG08_03660 PF02325 YGGT family ITG08_03665 PF02594 Uncharacterised ACR, YggU family COG1872 ITG08_03675 PF01725 Ham1 family ITG08_03680 PF06969 HemN C-terminal domain ITG08_03680 PF04055 Radical SAM superfamily ITG08_03685 PF04960 Glutaminase ITG08_03690 PF02390 Putative methyltransferase ITG08_03695 PF14815 NUDIX domain ITG08_03695 PF00730 HhH-GPD superfamily base excision DNA repair protein ITG08_03695 PF00633 Helix-hairpin-helix motif ITG08_03700 PF04362 Bacterial Fe(2+) trafficking ITG08_03705 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ITG08_03705 PF01464 Transglycosylase SLT domain ITG08_03745 PF00672 HAMP domain ITG08_03745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_03745 PF17200 Single Cache domain 2 ITG08_03840 PF00072 Response regulator receiver domain ITG08_03860 PF03739 Lipopolysaccharide export system permease LptF/LptG ITG08_03865 PF03739 Lipopolysaccharide export system permease LptF/LptG ITG08_03870 PF02789 Cytosol aminopeptidase family, N-terminal domain ITG08_03870 PF00883 Cytosol aminopeptidase family, catalytic domain ITG08_03875 PF04364 DNA polymerase III chi subunit, HolC ITG08_03880 PF08264 Anticodon-binding domain of tRNA ITG08_03880 PF00133 tRNA synthetases class I (I, L, M and V) ITG08_03880 PF10458 Valyl tRNA synthetase tRNA binding arm ITG08_03890 PF00583 Acetyltransferase (GNAT) family ITG08_03900 PF06877 Regulator of ribonuclease activity B ITG08_03910 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ITG08_03910 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ITG08_03915 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ITG08_03915 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ITG08_03920 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain ITG08_03920 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain ITG08_03925 PF01042 Endoribonuclease L-PSP ITG08_03930 PF01553 Acyltransferase ITG08_03935 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ITG08_03940 PF01722 BolA-like protein ITG08_03950 PF05494 MlaC protein ITG08_03955 PF02470 MlaD protein ITG08_03960 PF02405 Permease MlaE ITG08_03965 PF00005 ABC transporter ITG08_03970 PF01699 Sodium/calcium exchanger protein ITG08_03975 PF01380 SIS domain ITG08_03975 PF00571 CBS domain ITG08_03990 PF03968 OstA-like protein ITG08_03995 PF00005 ABC transporter ITG08_03995 PF12399 Branched-chain amino acid ATP-binding cassette transporter ITG08_04000 PF04552 Sigma-54, DNA binding domain ITG08_04000 PF04963 Sigma-54 factor, core binding domain ITG08_04000 PF00309 Sigma-54 factor, Activator interacting domain (AID) ITG08_04005 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ITG08_04010 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ITG08_04015 PF03668 P-loop ATPase protein family ITG08_04020 PF00381 PTS HPr component phosphorylation site ITG08_04025 PF00571 CBS domain ITG08_04025 PF03448 MgtE intracellular N domain ITG08_04025 PF01769 Divalent cation transporter ITG08_04030 PF01523 Putative modulator of DNA gyrase ITG08_04035 PF04751 Protein of unknown function (DUF615) ITG08_04040 PF00005 ABC transporter ITG08_04045 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_04055 PF02441 Flavoprotein ITG08_04060 PF02875 Mur ligase family, glutamate ligase domain ITG08_04060 PF08245 Mur ligase middle domain ITG08_04060 PF01225 Mur ligase family, catalytic domain ITG08_04065 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ITG08_04075 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like ITG08_04080 PF04357 TamB, inner membrane protein subunit of TAM complex ITG08_04085 PF01103 Surface antigen ITG08_04085 PF07244 Surface antigen variable number repeat ITG08_04085 PF17243 POTRA domain TamA domain 1 ITG08_04090 PF01625 Peptide methionine sulfoxide reductase ITG08_04095 PF06526 Protein of unknown function (DUF1107) ITG08_04100 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) ITG08_04115 PF00005 ABC transporter ITG08_04140 PF03600 Citrate transporter ITG08_04140 PF02080 TrkA-C domain ITG08_04145 PF00009 Elongation factor Tu GTP binding domain ITG08_04150 PF01507 Phosphoadenosine phosphosulfate reductase family ITG08_04155 PF02872 5'-nucleotidase, C-terminal domain ITG08_04155 PF00149 Calcineurin-like phosphoesterase ITG08_04200 PF13673 Acetyltransferase (GNAT) domain ITG08_04210 PF08525 Opacity-associated protein A N-terminal motif ITG08_04210 PF04225 Opacity-associated protein A LysM-like domain ITG08_04215 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ITG08_04215 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ITG08_04225 PF01196 Ribosomal protein L17 ITG08_04230 PF01000 RNA polymerase Rpb3/RpoA insert domain ITG08_04230 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ITG08_04230 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ITG08_04235 PF00163 Ribosomal protein S4/S9 N-terminal domain ITG08_04235 PF01479 S4 domain ITG08_04240 PF00411 Ribosomal protein S11 ITG08_04245 PF00416 Ribosomal protein S13/S18 ITG08_04250 PF00444 Ribosomal protein L36 ITG08_04255 PF00344 SecY translocase ITG08_04260 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ITG08_04265 PF00327 Ribosomal protein L30p/L7e ITG08_04270 PF00333 Ribosomal protein S5, N-terminal domain ITG08_04270 PF03719 Ribosomal protein S5, C-terminal domain ITG08_04275 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ITG08_04280 PF00347 Ribosomal protein L6 ITG08_04285 PF00410 Ribosomal protein S8 ITG08_04290 PF00253 Ribosomal protein S14p/S29e ITG08_04295 PF00281 Ribosomal protein L5 ITG08_04295 PF00673 ribosomal L5P family C-terminus ITG08_04300 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ITG08_04300 PF00467 KOW motif ITG08_04305 PF00238 Ribosomal protein L14p/L23e ITG08_04310 PF00366 Ribosomal protein S17 ITG08_04315 PF00831 Ribosomal L29 protein ITG08_04320 PF00252 Ribosomal protein L16p/L10e ITG08_04325 PF07650 KH domain ITG08_04325 PF00189 Ribosomal protein S3, C-terminal domain ITG08_04330 PF00237 Ribosomal protein L22p/L17e ITG08_04335 PF00203 Ribosomal protein S19 ITG08_04340 PF00181 Ribosomal Proteins L2, RNA binding domain ITG08_04340 PF03947 Ribosomal Proteins L2, C-terminal domain ITG08_04345 PF00276 Ribosomal protein L23 ITG08_04350 PF00573 Ribosomal protein L4/L1 family ITG08_04355 PF00297 Ribosomal protein L3 ITG08_04360 PF00338 Ribosomal protein S10p/S20e ITG08_04365 PF00009 Elongation factor Tu GTP binding domain ITG08_04365 PF03144 Elongation factor Tu domain 2 ITG08_04365 PF03143 Elongation factor Tu C-terminal domain ITG08_04370 PF03144 Elongation factor Tu domain 2 ITG08_04370 PF00009 Elongation factor Tu GTP binding domain ITG08_04370 PF03764 Elongation factor G, domain IV ITG08_04370 PF14492 Elongation Factor G, domain II ITG08_04370 PF00679 Elongation factor G C-terminus ITG08_04375 PF00177 Ribosomal protein S7p/S5e ITG08_04380 PF00164 Ribosomal protein S12/S23 ITG08_04390 PF02635 DsrE/DsrF-like family ITG08_04395 PF02635 DsrE/DsrF-like family ITG08_04400 PF08348 YheO-like PAS domain ITG08_04400 PF13309 HTH domain ITG08_04405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ITG08_04405 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ITG08_04415 PF04102 SlyX ITG08_04420 PF01112 Asparaginase ITG08_04425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ITG08_04435 PF00999 Sodium/hydrogen exchanger family ITG08_04435 PF02254 TrkA-N domain ITG08_04440 PF02525 Flavodoxin-like fold ITG08_04445 PF12848 ABC transporter ITG08_04445 PF00005 ABC transporter ITG08_04455 PF00561 alpha/beta hydrolase fold ITG08_04460 PF06794 Uncharacterised protein family (UPF0270) ITG08_04465 PF00485 Phosphoribulokinase / Uridine kinase family ITG08_04470 PF00027 Cyclic nucleotide-binding domain ITG08_04470 PF13545 Crp-like helix-turn-helix domain ITG08_04480 PF00171 Aldehyde dehydrogenase family ITG08_04485 PF04958 Arginine N-succinyltransferase beta subunit ITG08_04490 PF00202 Aminotransferase class-III ITG08_04495 PF00117 Glutamine amidotransferase class-I ITG08_04505 PF00579 tRNA synthetases class I (W and Y) ITG08_04510 PF13419 Haloacid dehalogenase-like hydrolase ITG08_04515 PF00834 Ribulose-phosphate 3 epimerase family ITG08_04520 PF02086 D12 class N6 adenine-specific DNA methyltransferase ITG08_04530 PF01761 3-dehydroquinate synthase ITG08_04535 PF01202 Shikimate kinase ITG08_04540 PF11741 AMIN domain ITG08_04540 PF00263 Bacterial type II and III secretion system protein ITG08_04540 PF03958 Bacterial type II/III secretion system short domain ITG08_04540 PF07660 Secretin and TonB N terminus short domain ITG08_04565 PF17092 Penicillin-binding protein OB-like domain ITG08_04565 PF00912 Transglycosylase ITG08_04565 PF00905 Penicillin binding protein transpeptidase domain ITG08_04570 PF03466 LysR substrate binding domain ITG08_04570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_04575 PF00462 Glutaredoxin ITG08_04575 PF08534 Redoxin ITG08_04580 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG08_04580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ITG08_04585 PF01042 Endoribonuclease L-PSP ITG08_04595 PF00583 Acetyltransferase (GNAT) family ITG08_04595 PF14698 Argininosuccinate lyase C-terminal ITG08_04595 PF00206 Lyase ITG08_04600 PF00764 Arginosuccinate synthase ITG08_04605 PF00696 Amino acid kinase family ITG08_04610 PF01118 Semialdehyde dehydrogenase, NAD binding domain ITG08_04610 PF02774 Semialdehyde dehydrogenase, dimerisation domain ITG08_04615 PF01546 Peptidase family M20/M25/M40 ITG08_04615 PF07687 Peptidase dimerisation domain ITG08_04620 PF00311 Phosphoenolpyruvate carboxylase ITG08_04630 PF02219 Methylenetetrahydrofolate reductase ITG08_04635 PF00742 Homoserine dehydrogenase ITG08_04635 PF03447 Homoserine dehydrogenase, NAD binding domain ITG08_04635 PF00696 Amino acid kinase family ITG08_04640 PF01053 Cys/Met metabolism PLP-dependent enzyme ITG08_04645 PF01340 Met Apo-repressor, MetJ ITG08_04650 PF03949 Malic enzyme, NAD binding domain ITG08_04650 PF00390 Malic enzyme, N-terminal domain ITG08_04655 PF01197 Ribosomal protein L31 ITG08_04660 PF17764 3′ DNA-binding domain (3′BD) ITG08_04660 PF18074 Primosomal protein N C-terminal domain ITG08_04660 PF00270 DEAD/DEAH box helicase ITG08_04660 PF00271 Helicase conserved C-terminal domain ITG08_04660 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ITG08_04665 PF00356 Bacterial regulatory proteins, lacI family ITG08_04675 PF00227 Proteasome subunit ITG08_04680 PF00004 ATPase family associated with various cellular activities (AAA) ITG08_04680 PF07724 AAA domain (Cdc48 subfamily) ITG08_04685 PF01040 UbiA prenyltransferase family ITG08_04690 PF03737 Aldolase/RraA ITG08_04695 PF06005 Cell division protein ZapB ITG08_04700 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ITG08_04715 PF05656 Protein of unknown function (DUF805) ITG08_04725 PF00121 Triosephosphate isomerase ITG08_04730 PF00365 Phosphofructokinase ITG08_04735 PF16916 Dimerisation domain of Zinc Transporter ITG08_04735 PF01545 Cation efflux family ITG08_04745 PF00486 Transcriptional regulatory protein, C terminal ITG08_04745 PF00072 Response regulator receiver domain ITG08_04750 PF16527 Two-component sensor protein CpxA, periplasmic domain ITG08_04750 PF00512 His Kinase A (phospho-acceptor) domain ITG08_04750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_04750 PF00672 HAMP domain ITG08_04755 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ITG08_04755 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ITG08_04760 PF00588 SpoU rRNA Methylase family ITG08_04765 PF04186 FxsA cytoplasmic membrane protein ITG08_04770 PF10415 Fumarase C C-terminus ITG08_04770 PF00206 Lyase ITG08_04775 PF03605 Anaerobic c4-dicarboxylate membrane transporter ITG08_04780 PF03606 C4-dicarboxylate anaerobic carrier ITG08_04790 PF00696 Amino acid kinase family ITG08_04795 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ITG08_04795 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ITG08_04800 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ITG08_04800 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ITG08_04805 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain ITG08_04805 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain ITG08_04810 PF01316 Arginine repressor, DNA binding domain ITG08_04810 PF02863 Arginine repressor, C-terminal domain ITG08_04815 PF11412 Disulphide bond corrector protein DsbC ITG08_04815 PF02683 Cytochrome C biogenesis protein transmembrane region ITG08_04820 PF00196 Bacterial regulatory proteins, luxR family ITG08_04820 PF00072 Response regulator receiver domain ITG08_04825 PF02080 TrkA-C domain ITG08_04825 PF00999 Sodium/hydrogen exchanger family ITG08_04825 PF03471 Transporter associated domain ITG08_04835 PF00474 Sodium:solute symporter family ITG08_04845 PF10415 Fumarase C C-terminus ITG08_04845 PF00206 Lyase ITG08_04850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_04850 PF01627 Hpt domain ITG08_04850 PF00072 Response regulator receiver domain ITG08_04850 PF00672 HAMP domain ITG08_04850 PF00512 His Kinase A (phospho-acceptor) domain ITG08_04855 PF12832 MFS_1 like family ITG08_04870 PF16177 Acetyl-coenzyme A synthetase N-terminus ITG08_04870 PF00501 AMP-binding enzyme ITG08_04870 PF13193 AMP-binding enzyme C-terminal domain ITG08_04875 PF01220 Dehydroquinase class II ITG08_04880 PF00364 Biotin-requiring enzyme ITG08_04885 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ITG08_04885 PF00289 Biotin carboxylase, N-terminal domain ITG08_04885 PF02785 Biotin carboxylase C-terminal domain ITG08_04895 PF01207 Dihydrouridine synthase (Dus) ITG08_04900 PF02954 Bacterial regulatory protein, Fis family ITG08_04905 PF13411 MerR HTH family regulatory protein ITG08_04910 PF01808 AICARFT/IMPCHase bienzyme ITG08_04910 PF02142 MGS-like domain ITG08_04915 PF02844 Phosphoribosylglycinamide synthetase, N domain ITG08_04915 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ITG08_04915 PF02843 Phosphoribosylglycinamide synthetase, C domain ITG08_04925 PF00216 Bacterial DNA-binding protein ITG08_04930 PF00571 CBS domain ITG08_04930 PF01595 Cyclin M transmembrane N-terminal domain ITG08_04935 PF04222 Protein of unknown function (DUF416) ITG08_04945 PF03167 Uracil DNA glycosylase superfamily ITG08_04950 PF01208 Uroporphyrinogen decarboxylase (URO-D) ITG08_04955 PF09297 NADH pyrophosphatase zinc ribbon domain ITG08_04955 PF00293 NUDIX domain ITG08_04960 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ ITG08_04965 PF04997 RNA polymerase Rpb1, domain 1 ITG08_04965 PF00623 RNA polymerase Rpb1, domain 2 ITG08_04965 PF05000 RNA polymerase Rpb1, domain 4 ITG08_04965 PF04983 RNA polymerase Rpb1, domain 3 ITG08_04965 PF04998 RNA polymerase Rpb1, domain 5 ITG08_04970 PF10385 RNA polymerase beta subunit external 1 domain ITG08_04970 PF04560 RNA polymerase Rpb2, domain 7 ITG08_04970 PF00562 RNA polymerase Rpb2, domain 6 ITG08_04970 PF04565 RNA polymerase Rpb2, domain 3 ITG08_04970 PF04561 RNA polymerase Rpb2, domain 2 ITG08_04970 PF04563 RNA polymerase beta subunit ITG08_04975 PF16320 Ribosomal protein L7/L12 dimerisation domain ITG08_04975 PF00542 Ribosomal protein L7/L12 C-terminal domain ITG08_04980 PF00466 Ribosomal protein L10 ITG08_04985 PF00687 Ribosomal protein L1p/L10e family ITG08_04990 PF03946 Ribosomal protein L11, N-terminal domain ITG08_04990 PF00298 Ribosomal protein L11, RNA binding domain ITG08_04995 PF00467 KOW motif ITG08_04995 PF02357 Transcription termination factor nusG ITG08_05000 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ITG08_05005 PF00009 Elongation factor Tu GTP binding domain ITG08_05005 PF03144 Elongation factor Tu domain 2 ITG08_05005 PF03143 Elongation factor Tu C-terminal domain ITG08_05030 PF00485 Phosphoribulokinase / Uridine kinase family ITG08_05035 PF03099 Biotin/lipoate A/B protein ligase family ITG08_05035 PF02237 Biotin protein ligase C terminal domain ITG08_05035 PF08279 HTH domain ITG08_05040 PF01565 FAD binding domain ITG08_05040 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ITG08_05050 PF13091 PLD-like domain ITG08_05135 PF01177 Asp/Glu/Hydantoin racemase ITG08_05145 PF07715 TonB-dependent Receptor Plug Domain ITG08_05145 PF00593 TonB dependent receptor ITG08_05150 PF05958 tRNA (Uracil-5-)-methyltransferase ITG08_05160 PF00440 Bacterial regulatory proteins, tetR family ITG08_05165 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG08_05165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ITG08_05170 PF01554 MatE ITG08_05175 PF04072 Leucine carboxyl methyltransferase ITG08_05180 PF01726 LexA DNA binding domain ITG08_05180 PF00717 Peptidase S24-like ITG08_05185 PF01219 Prokaryotic diacylglycerol kinase ITG08_05190 PF01553 Acyltransferase ITG08_05195 PF01040 UbiA prenyltransferase family ITG08_05200 PF04345 Chorismate lyase ITG08_05205 PF03748 Flagellar basal body-associated protein FliL ITG08_05210 PF01694 Rhomboid family ITG08_05210 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease ITG08_05215 PF00581 Rhodanese-like domain ITG08_05220 PF00140 Sigma-70 factor, region 1.2 ITG08_05220 PF04542 Sigma-70 region 2 ITG08_05220 PF04545 Sigma-70, region 4 ITG08_05225 PF18075 FtsX extracellular domain ITG08_05230 PF00005 ABC transporter ITG08_05235 PF00448 SRP54-type protein, GTPase domain ITG08_05235 PF02881 SRP54-type protein, helical bundle domain ITG08_05250 PF01914 MarC family integral membrane protein ITG08_05290 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ITG08_05290 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ITG08_05295 PF01022 Bacterial regulatory protein, arsR family ITG08_05300 PF00563 EAL domain ITG08_05300 PF08668 HDOD domain ITG08_05305 PF01810 LysE type translocator ITG08_05310 PF12146 Serine aminopeptidase, S33 ITG08_05330 PF03942 DTW domain ITG08_05335 PF00563 EAL domain ITG08_05335 PF08495 FIST N domain ITG08_05335 PF10442 FIST C domain ITG08_05335 PF00990 Diguanylate cyclase, GGDEF domain ITG08_05340 PF00563 EAL domain ITG08_05340 PF08495 FIST N domain ITG08_05340 PF00990 Diguanylate cyclase, GGDEF domain ITG08_05340 PF10442 FIST C domain ITG08_05345 PF13419 Haloacid dehalogenase-like hydrolase ITG08_05350 PF02899 Phage integrase, N-terminal SAM-like domain ITG08_05350 PF00589 Phage integrase family ITG08_05360 PF01678 Diaminopimelate epimerase ITG08_05365 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ITG08_05365 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ITG08_05375 PF01491 Frataxin-like domain ITG08_05380 PF12633 Adenylate cyclase NT domain ITG08_05380 PF01295 Adenylate cyclase, class-I ITG08_05385 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ITG08_05385 PF03900 Porphobilinogen deaminase, C-terminal domain ITG08_05390 PF02602 Uroporphyrinogen-III synthase HemD ITG08_05395 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase ITG08_05400 PF07219 HemY protein N-terminus ITG08_05450 PF00175 Oxidoreductase NAD-binding domain ITG08_05460 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ITG08_05470 PF07498 Rho termination factor, N-terminal domain ITG08_05470 PF07497 Rho termination factor, RNA-binding domain ITG08_05470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ITG08_05475 PF00085 Thioredoxin ITG08_05480 PF00270 DEAD/DEAH box helicase ITG08_05480 PF00271 Helicase conserved C-terminal domain ITG08_05485 PF02541 Ppx/GppA phosphatase family ITG08_05490 PF02592 Putative vitamin uptake transporter ITG08_05500 PF00270 DEAD/DEAH box helicase ITG08_05500 PF00271 Helicase conserved C-terminal domain ITG08_05500 PF00570 HRDC domain ITG08_05500 PF16124 RecQ zinc-binding ITG08_05500 PF09382 RQC domain ITG08_05505 PF00892 EamA-like transporter family ITG08_05510 PF02311 AraC-like ligand binding domain ITG08_05510 PF12833 Helix-turn-helix domain ITG08_05515 PF01810 LysE type translocator ITG08_05525 PF08534 Redoxin ITG08_05530 PF00580 UvrD/REP helicase N-terminal domain ITG08_05530 PF13361 UvrD-like helicase C-terminal domain ITG08_05540 PF05114 Protein of unknown function (DUF692) ITG08_05560 PF07690 Major Facilitator Superfamily ITG08_05565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_05565 PF03466 LysR substrate binding domain ITG08_05570 PF01321 Creatinase/Prolidase N-terminal domain ITG08_05570 PF00557 Metallopeptidase family M24 ITG08_05570 PF01321 Creatinase/Prolidase N-terminal domain ITG08_05570 PF00557 Metallopeptidase family M24 ITG08_05575 PF06968 Biotin and Thiamin Synthesis associated domain ITG08_05575 PF04055 Radical SAM superfamily ITG08_05580 PF05690 Thiazole biosynthesis protein ThiG ITG08_05585 PF02597 ThiS family ITG08_05590 PF00899 ThiF family ITG08_05595 PF02581 Thiamine monophosphate synthase ITG08_05600 PF01964 Radical SAM ThiC family ITG08_05600 PF13667 ThiC-associated domain ITG08_05605 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ITG08_05610 PF07731 Multicopper oxidase ITG08_05610 PF00394 Multicopper oxidase ITG08_05610 PF07732 Multicopper oxidase ITG08_05655 PF12724 Flavodoxin domain ITG08_05660 PF02386 Cation transport protein ITG08_05665 PF01205 Uncharacterized protein family UPF0029 ITG08_05665 PF09186 Domain of unknown function (DUF1949) ITG08_05670 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ITG08_05670 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ITG08_05670 PF00378 Enoyl-CoA hydratase/isomerase ITG08_05675 PF02803 Thiolase, C-terminal domain ITG08_05675 PF00108 Thiolase, N-terminal domain ITG08_05680 PF08240 Alcohol dehydrogenase GroES-like domain ITG08_05680 PF00107 Zinc-binding dehydrogenase ITG08_05685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_05685 PF03466 LysR substrate binding domain ITG08_05695 PF01206 Sulfurtransferase TusA ITG08_05705 PF01169 Uncharacterized protein family UPF0016 ITG08_05710 PF02091 Glycyl-tRNA synthetase alpha subunit ITG08_05715 PF05746 DALR anticodon binding domain ITG08_05715 PF02092 Glycyl-tRNA synthetase beta subunit ITG08_05720 PF00128 Alpha amylase, catalytic domain ITG08_05725 PF00155 Aminotransferase class I and II ITG08_05730 PF00011 Hsp20/alpha crystallin family ITG08_05735 PF00204 DNA gyrase B ITG08_05735 PF00986 DNA gyrase B subunit, carboxyl terminus ITG08_05735 PF18053 DNA gyrase B subunit insert domain ITG08_05735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_05735 PF01751 Toprim domain ITG08_05740 PF02463 RecF/RecN/SMC N terminal domain ITG08_05745 PF02767 DNA polymerase III beta subunit, central domain ITG08_05745 PF02768 DNA polymerase III beta subunit, C-terminal domain ITG08_05745 PF00712 DNA polymerase III beta subunit, N-terminal domain ITG08_05750 PF00308 Bacterial dnaA protein ITG08_05750 PF08299 Bacterial dnaA protein helix-turn-helix ITG08_05750 PF11638 DnaA N-terminal domain ITG08_05755 PF00497 Bacterial extracellular solute-binding proteins, family 3 ITG08_05760 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_05765 PF00005 ABC transporter ITG08_05770 PF00468 Ribosomal protein L34 ITG08_05775 PF00825 Ribonuclease P ITG08_05780 PF01809 Putative membrane protein insertion efficiency factor ITG08_05785 PF14849 YidC periplasmic domain ITG08_05785 PF02096 60Kd inner membrane protein ITG08_05790 PF01926 50S ribosome-binding GTPase ITG08_05790 PF12631 MnmE helical domain ITG08_05790 PF10396 GTP-binding protein TrmE N-terminus ITG08_05795 PF00258 Flavodoxin ITG08_05800 PF13932 GidA associated domain ITG08_05800 PF01134 Glucose inhibited division protein A ITG08_05805 PF02527 rRNA small subunit methyltransferase G ITG08_05810 PF13614 AAA domain ITG08_05815 PF17762 HTH domain found in ParB protein ITG08_05815 PF02195 ParB-like nuclease domain ITG08_05820 PF03899 ATP synthase I chain ITG08_05825 PF00119 ATP synthase A chain ITG08_05830 PF00137 ATP synthase subunit C ITG08_05835 PF00430 ATP synthase B/B' CF(0) ITG08_05840 PF00213 ATP synthase delta (OSCP) subunit ITG08_05845 PF02874 ATP synthase alpha/beta family, beta-barrel domain ITG08_05845 PF00306 ATP synthase alpha/beta chain, C terminal domain ITG08_05845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ITG08_05850 PF00231 ATP synthase ITG08_05855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ITG08_05855 PF02874 ATP synthase alpha/beta family, beta-barrel domain ITG08_05860 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ITG08_05860 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ITG08_05865 PF12804 MobA-like NTP transferase domain ITG08_05865 PF00132 Bacterial transferase hexapeptide (six repeats) ITG08_05870 PF07690 Major Facilitator Superfamily ITG08_05875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_05875 PF03466 LysR substrate binding domain ITG08_05880 PF00291 Pyridoxal-phosphate dependent enzyme ITG08_05880 PF00585 C-terminal regulatory domain of Threonine dehydratase ITG08_05885 PF00920 Dehydratase family ITG08_05890 PF01063 Amino-transferase class IV ITG08_05900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ITG08_05900 PF00205 Thiamine pyrophosphate enzyme, central domain ITG08_05900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ITG08_05915 PF02796 Helix-turn-helix domain of resolvase ITG08_05915 PF00239 Resolvase, N terminal domain ITG08_05955 PF01323 DSBA-like thioredoxin domain ITG08_05960 PF01636 Phosphotransferase enzyme family ITG08_05965 PF13746 4Fe-4S dicluster domain ITG08_05965 PF12801 4Fe-4S binding domain ITG08_05965 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ITG08_05970 PF06288 Protein of unknown function (DUF1040) ITG08_05980 PF07070 SpoOM protein ITG08_05985 PF03006 Haemolysin-III related ITG08_05995 PF02386 Cation transport protein ITG08_06000 PF02080 TrkA-C domain ITG08_06000 PF02254 TrkA-N domain ITG08_06005 PF01029 NusB family ITG08_06005 PF01189 16S rRNA methyltransferase RsmB/F ITG08_06010 PF00551 Formyl transferase ITG08_06010 PF02911 Formyl transferase, C-terminal domain ITG08_06015 PF01327 Polypeptide deformylase ITG08_06025 PF02481 DNA recombination-mediator protein A ITG08_06025 PF17782 DprA winged helix domain ITG08_06030 PF04361 Protein of unknown function (DUF494) ITG08_06035 PF01396 Topoisomerase DNA binding C4 zinc finger ITG08_06040 PF02222 ATP-grasp domain ITG08_06040 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ITG08_06045 PF00731 AIR carboxylase ITG08_06050 PF01300 Telomere recombination ITG08_06055 PF01218 Coproporphyrinogen III oxidase ITG08_06060 PF01488 Shikimate / quinate 5-dehydrogenase ITG08_06060 PF08501 Shikimate dehydrogenase substrate binding domain ITG08_06060 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ITG08_06070 PF00132 Bacterial transferase hexapeptide (six repeats) ITG08_06115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_06115 PF03466 LysR substrate binding domain ITG08_06120 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ITG08_06120 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ITG08_06125 PF04380 Membrane fusogenic activity ITG08_06130 PF00873 AcrB/AcrD/AcrF family ITG08_06135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG08_06140 PF00440 Bacterial regulatory proteins, tetR family ITG08_06145 PF13361 UvrD-like helicase C-terminal domain ITG08_06145 PF00580 UvrD/REP helicase N-terminal domain ITG08_06150 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ITG08_06180 PF00005 ABC transporter ITG08_06180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ITG08_06185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ITG08_06190 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_06195 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_06195 PF12911 N-terminal TM domain of oligopeptide transport permease C ITG08_06205 PF03116 NQR2, RnfD, RnfE family ITG08_06215 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG08_06215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ITG08_06220 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ITG08_06225 PF01432 Peptidase family M3 ITG08_06230 PF01037 Lrp/AsnC ligand binding domain ITG08_06235 PF00990 Diguanylate cyclase, GGDEF domain ITG08_06235 PF08448 PAS fold ITG08_06235 PF00563 EAL domain ITG08_06240 PF04445 Putative SAM-dependent methyltransferase ITG08_06250 PF00892 EamA-like transporter family ITG08_06255 PF00582 Universal stress protein family ITG08_06260 PF00210 Ferritin-like domain ITG08_06265 PF10625 Universal stress protein B (UspB) ITG08_06280 PF02646 RmuC family ITG08_06285 PF01209 ubiE/COQ5 methyltransferase family ITG08_06290 PF02036 SCP-2 sterol transfer family ITG08_06295 PF03109 ABC1 family ITG08_06300 PF02416 mttA/Hcf106 family ITG08_06305 PF02416 mttA/Hcf106 family ITG08_06310 PF00902 Sec-independent protein translocase protein (TatC) ITG08_06315 PF01026 TatD related DNase ITG08_06320 PF00490 Delta-aminolevulinic acid dehydratase ITG08_06330 PF01367 5'-3' exonuclease, C-terminal SAM fold ITG08_06330 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ITG08_06330 PF00476 DNA polymerase family A ITG08_06330 PF01612 3'-5' exonuclease ITG08_06340 PF01926 50S ribosome-binding GTPase ITG08_06345 PF00034 Cytochrome c ITG08_06355 PF04220 Der GTPase activator (YihI) ITG08_06360 PF10675 Protein of unknown function (DUF2489) ITG08_06365 PF04055 Radical SAM superfamily ITG08_06365 PF06969 HemN C-terminal domain ITG08_06370 PF00990 Diguanylate cyclase, GGDEF domain ITG08_06370 PF00563 EAL domain ITG08_06370 PF03707 Bacterial signalling protein N terminal repeat ITG08_06375 PF00158 Sigma-54 interaction domain ITG08_06375 PF00072 Response regulator receiver domain ITG08_06375 PF02954 Bacterial regulatory protein, Fis family ITG08_06380 PF00989 PAS fold ITG08_06380 PF00512 His Kinase A (phospho-acceptor) domain ITG08_06380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_06390 PF00120 Glutamine synthetase, catalytic domain ITG08_06390 PF03951 Glutamine synthetase, beta-Grasp domain ITG08_06395 PF03144 Elongation factor Tu domain 2 ITG08_06395 PF00009 Elongation factor Tu GTP binding domain ITG08_06395 PF00679 Elongation factor G C-terminus ITG08_06400 PF03668 P-loop ATPase protein family ITG08_06410 PF03631 Virulence factor BrkB ITG08_06415 PF02580 D-Tyr-tRNA(Tyr) deacylase ITG08_06420 PF00583 Acetyltransferase (GNAT) family ITG08_06420 PF09500 Putative thioesterase (yiiD_Cterm) ITG08_06430 PF01293 Phosphoenolpyruvate carboxykinase ITG08_06435 PF01430 Hsp33 protein ITG08_06440 PF01479 S4 domain ITG08_06445 PF11356 Type II secretion system protein C ITG08_06450 PF00263 Bacterial type II and III secretion system protein ITG08_06450 PF03958 Bacterial type II/III secretion system short domain ITG08_06455 PF00437 Type II/IV secretion system protein ITG08_06460 PF00482 Type II secretion system (T2SS), protein F ITG08_06465 PF07963 Prokaryotic N-terminal methylation motif ITG08_06465 PF08334 Type II secretion system (T2SS), protein G ITG08_06470 PF12019 Type II transport protein GspH ITG08_06475 PF07963 Prokaryotic N-terminal methylation motif ITG08_06475 PF02501 Type II secretion system (T2SS), protein I ITG08_06480 PF07963 Prokaryotic N-terminal methylation motif ITG08_06480 PF11612 Type II secretion system (T2SS), protein J ITG08_06485 PF03934 Type II secretion system (T2SS), protein K ITG08_06490 PF12693 GspL periplasmic domain ITG08_06490 PF05134 Type II secretion system (T2SS), protein L ITG08_06495 PF04612 Type II secretion system (T2SS), protein M ITG08_06500 PF01203 Type II secretion system (T2SS), protein N ITG08_06505 PF00459 Inositol monophosphatase family ITG08_06510 PF00293 NUDIX domain ITG08_06515 PF01106 NifU-like domain ITG08_06515 PF01521 Iron-sulphur cluster biosynthesis ITG08_06520 PF00156 Phosphoribosyl transferase domain ITG08_06525 PF00561 alpha/beta hydrolase fold ITG08_06535 PF17674 HHH domain ITG08_06535 PF00575 S1 RNA binding domain ITG08_06535 PF09371 Tex-like protein N-terminal domain ITG08_06535 PF16921 Tex protein YqgF-like domain ITG08_06540 PF03449 Transcription elongation factor, N-terminal ITG08_06540 PF01272 Transcription elongation factor, GreA/GreB, C-term ITG08_06545 PF00486 Transcriptional regulatory protein, C terminal ITG08_06545 PF00072 Response regulator receiver domain ITG08_06550 PF00672 HAMP domain ITG08_06550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_06550 PF00512 His Kinase A (phospho-acceptor) domain ITG08_06555 PF00270 DEAD/DEAH box helicase ITG08_06555 PF00271 Helicase conserved C-terminal domain ITG08_06555 PF17191 RecG wedge domain ITG08_06560 PF13291 ACT domain ITG08_06560 PF04607 Region found in RelA / SpoT proteins ITG08_06560 PF02824 TGS domain ITG08_06565 PF01192 RNA polymerase Rpb6 ITG08_06570 PF00625 Guanylate kinase ITG08_06575 PF00860 Permease family ITG08_06585 PF00313 'Cold-shock' DNA-binding domain ITG08_06590 PF00145 C-5 cytosine-specific DNA methylase ITG08_06595 PF00512 His Kinase A (phospho-acceptor) domain ITG08_06595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_06615 PF17841 BID domain of Bartonella effector protein (Bep) ITG08_06615 PF01443 Viral (Superfamily 1) RNA helicase ITG08_06615 PF03389 MobA/MobL family ITG08_06650 PF08340 Domain of unknown function (DUF1732) ITG08_06650 PF03755 YicC-like family, N-terminal region ITG08_06655 PF01138 3' exoribonuclease family, domain 1 ITG08_06655 PF03725 3' exoribonuclease family, domain 2 ITG08_06660 PF00156 Phosphoribosyl transferase domain ITG08_06665 PF03279 Bacterial lipid A biosynthesis acyltransferase ITG08_06670 PF00440 Bacterial regulatory proteins, tetR family ITG08_06675 PF04127 DNA / pantothenate metabolism flavoprotein ITG08_06675 PF02441 Flavoprotein ITG08_06680 PF04002 RadC-like JAB domain ITG08_06685 PF00830 Ribosomal L28 family ITG08_06690 PF00471 Ribosomal protein L33 ITG08_06700 PF06827 Zinc finger found in FPG and IleRS ITG08_06700 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ITG08_06700 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ITG08_06705 PF01370 NAD dependent epimerase/dehydratase family ITG08_06715 PF01467 Cytidylyltransferase-like ITG08_06720 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ITG08_06730 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ITG08_06730 PF00534 Glycosyl transferases group 1 ITG08_06740 PF00535 Glycosyl transferase family 2 ITG08_06750 PF02348 Cytidylyltransferase ITG08_06755 PF00483 Nucleotidyl transferase ITG08_06765 PF03102 NeuB family ITG08_06765 PF08666 SAF domain ITG08_06770 PF02350 UDP-N-acetylglucosamine 2-epimerase ITG08_06775 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ITG08_06780 PF02719 Polysaccharide biosynthesis protein ITG08_06800 PF03279 Bacterial lipid A biosynthesis acyltransferase ITG08_06805 PF01370 NAD dependent epimerase/dehydratase family ITG08_06810 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ITG08_06810 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ITG08_06810 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ITG08_06815 PF00440 Bacterial regulatory proteins, tetR family ITG08_06815 PF08360 QacR-like protein, C-terminal region ITG08_06820 PF01551 Peptidase family M23 ITG08_06825 PF06426 Serine acetyltransferase, N-terminal ITG08_06825 PF00132 Bacterial transferase hexapeptide (six repeats) ITG08_06830 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ITG08_06830 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ITG08_06835 PF02556 Preprotein translocase subunit SecB ITG08_06840 PF00581 Rhodanese-like domain ITG08_06845 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ITG08_06875 PF02719 Polysaccharide biosynthesis protein ITG08_06880 PF01370 NAD dependent epimerase/dehydratase family ITG08_06885 PF02397 Bacterial sugar transferase ITG08_06905 PF06082 Exopolysaccharide biosynthesis protein YbjH ITG08_06910 PF18412 Outer-membrane lipoprotein Wza C-terminal domain ITG08_06910 PF02563 Polysaccharide biosynthesis/export protein ITG08_06910 PF10531 SLBB domain ITG08_06915 PF01451 Low molecular weight phosphotyrosine protein phosphatase ITG08_06920 PF13614 AAA domain ITG08_06920 PF13807 G-rich domain on putative tyrosine kinase ITG08_06920 PF02706 Chain length determinant protein ITG08_06955 PF01943 Polysaccharide biosynthesis protein ITG08_06960 PF01501 Glycosyl transferase family 8 ITG08_06960 PF00535 Glycosyl transferase family 2 ITG08_06970 PF00535 Glycosyl transferase family 2 ITG08_06970 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 ITG08_06975 PF00535 Glycosyl transferase family 2 ITG08_06980 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ITG08_06980 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ITG08_06980 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ITG08_06985 PF00483 Nucleotidyl transferase ITG08_06990 PF00953 Glycosyl transferase family 4 ITG08_06995 PF00953 Glycosyl transferase family 4 ITG08_07000 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ITG08_07000 PF01676 Metalloenzyme superfamily ITG08_07010 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ITG08_07010 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ITG08_07015 PF01554 MatE ITG08_07020 PF00166 Chaperonin 10 Kd subunit ITG08_07025 PF00118 TCP-1/cpn60 chaperonin family ITG08_07030 PF08447 PAS fold ITG08_07030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_07030 PF13426 PAS domain ITG08_07035 PF00990 Diguanylate cyclase, GGDEF domain ITG08_07035 PF08448 PAS fold ITG08_07040 PF00990 Diguanylate cyclase, GGDEF domain ITG08_07045 PF00072 Response regulator receiver domain ITG08_07045 PF00990 Diguanylate cyclase, GGDEF domain ITG08_07050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_07050 PF00512 His Kinase A (phospho-acceptor) domain ITG08_07050 PF08446 PAS fold ITG08_07050 PF00360 Phytochrome region ITG08_07050 PF01590 GAF domain ITG08_07055 PF00196 Bacterial regulatory proteins, luxR family ITG08_07055 PF00072 Response regulator receiver domain ITG08_07060 PF00990 Diguanylate cyclase, GGDEF domain ITG08_07060 PF03707 Bacterial signalling protein N terminal repeat ITG08_07060 PF00563 EAL domain ITG08_07065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_07075 PF00563 EAL domain ITG08_07075 PF00990 Diguanylate cyclase, GGDEF domain ITG08_07075 PF13426 PAS domain ITG08_07080 PF02308 MgtC family ITG08_07085 PF04055 Radical SAM superfamily ITG08_07090 PF01132 Elongation factor P (EF-P) OB domain ITG08_07090 PF08207 Elongation factor P (EF-P) KOW-like domain ITG08_07090 PF09285 Elongation factor P, C-terminal ITG08_07095 PF02313 Fumarate reductase subunit D ITG08_07100 PF02300 Fumarate reductase subunit C ITG08_07105 PF13085 2Fe-2S iron-sulfur cluster binding domain ITG08_07105 PF13183 4Fe-4S dicluster domain ITG08_07110 PF00890 FAD binding domain ITG08_07110 PF02910 Fumarate reductase flavoprotein C-term ITG08_07115 PF00152 tRNA synthetases class II (D, K and N) ITG08_07125 PF00672 HAMP domain ITG08_07125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_07130 PF02080 TrkA-C domain ITG08_07130 PF03600 Citrate transporter ITG08_07135 PF02666 Phosphatidylserine decarboxylase ITG08_07140 PF03193 RsgA GTPase ITG08_07145 PF00929 Exonuclease ITG08_07235 PF08331 Domain of unknown function (DUF1730) ITG08_07240 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ITG08_07245 PF01520 N-acetylmuramoyl-L-alanine amidase ITG08_07250 PF08676 MutL C terminal dimerisation domain ITG08_07250 PF01119 DNA mismatch repair protein, C-terminal domain ITG08_07260 PF17209 Hfq protein ITG08_07265 PF01926 50S ribosome-binding GTPase ITG08_07265 PF13167 GTP-binding GTPase N-terminal ITG08_07265 PF16360 GTP-binding GTPase Middle Region ITG08_07270 PF01145 SPFH domain / Band 7 family ITG08_07270 PF12221 Bacterial membrane protein N terminal ITG08_07275 PF01145 SPFH domain / Band 7 family ITG08_07280 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) ITG08_07285 PF00709 Adenylosuccinate synthetase ITG08_07290 PF08238 Sel1 repeat ITG08_07295 PF01979 Amidohydrolase family ITG08_07300 PF00773 RNB domain ITG08_07300 PF17876 Cold shock domain ITG08_07300 PF08461 Ribonuclease R winged-helix domain ITG08_07300 PF08206 Ribonuclease B OB domain ITG08_07300 PF00575 S1 RNA binding domain ITG08_07305 PF08032 RNA 2'-O ribose methyltransferase substrate binding ITG08_07305 PF00588 SpoU rRNA Methylase family ITG08_07310 PF01250 Ribosomal protein S6 ITG08_07315 PF01084 Ribosomal protein S18 ITG08_07320 PF03948 Ribosomal protein L9, C-terminal domain ITG08_07320 PF01281 Ribosomal protein L9, N-terminal domain ITG08_07330 PF03796 DnaB-like helicase C terminal domain ITG08_07330 PF00772 DnaB-like helicase N terminal domain ITG08_07335 PF01168 Alanine racemase, N-terminal domain ITG08_07335 PF00842 Alanine racemase, C-terminal domain ITG08_07345 PF01894 Uncharacterised protein family UPF0047 ITG08_07350 PF00342 Phosphoglucose isomerase ITG08_07360 PF01475 Ferric uptake regulator family ITG08_07365 PF01207 Dihydrouridine synthase (Dus) ITG08_07370 PF09583 Phage shock protein G (Phageshock_PspG) ITG08_07385 PF00175 Oxidoreductase NAD-binding domain ITG08_07385 PF00667 FAD binding domain ITG08_07385 PF00258 Flavodoxin ITG08_07390 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ITG08_07390 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ITG08_07395 PF01507 Phosphoadenosine phosphosulfate reductase family ITG08_07470 PF00999 Sodium/hydrogen exchanger family ITG08_07475 PF02574 Homocysteine S-methyltransferase ITG08_07475 PF02965 Vitamin B12 dependent methionine synthase, activation domain ITG08_07475 PF02607 B12 binding domain ITG08_07475 PF02310 B12 binding domain ITG08_07475 PF00809 Pterin binding enzyme ITG08_07480 PF00696 Amino acid kinase family ITG08_07480 PF01842 ACT domain ITG08_07485 PF00266 Aminotransferase class-V ITG08_07495 PF00005 ABC transporter ITG08_07495 PF17755 UvrA DNA-binding domain ITG08_07495 PF17760 UvrA interaction domain ITG08_07500 PF00483 Nucleotidyl transferase ITG08_07505 PF00196 Bacterial regulatory proteins, luxR family ITG08_07580 PF00436 Single-strand binding protein family ITG08_07585 PF00563 EAL domain ITG08_07585 PF17157 Gammaproteobacterial periplasmic sensor domain ITG08_07585 PF00990 Diguanylate cyclase, GGDEF domain ITG08_07605 PF11741 AMIN domain ITG08_07605 PF00263 Bacterial type II and III secretion system protein ITG08_07605 PF03958 Bacterial type II/III secretion system short domain ITG08_07605 PF07660 Secretin and TonB N terminus short domain ITG08_07610 PF13401 AAA domain ITG08_07610 PF01471 Putative peptidoglycan binding domain ITG08_07620 PF00437 Type II/IV secretion system protein ITG08_07620 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ITG08_07625 PF00482 Type II secretion system (T2SS), protein F ITG08_07635 PF07963 Prokaryotic N-terminal methylation motif ITG08_07640 PF07963 Prokaryotic N-terminal methylation motif ITG08_07675 PF04085 rod shape-determining protein MreC ITG08_07680 PF04093 rod shape-determining protein MreD ITG08_07685 PF02545 Maf-like protein ITG08_07690 PF00575 S1 RNA binding domain ITG08_07690 PF10150 Ribonuclease E/G family ITG08_07700 PF00795 Carbon-nitrogen hydrolase ITG08_07705 PF01523 Putative modulator of DNA gyrase ITG08_07710 PF13638 PIN domain ITG08_07710 PF02562 PhoH-like protein ITG08_07715 PF18337 RapA N-terminal Tudor like domain ITG08_07715 PF18339 RapA N-terminal Tudor like domain 1 ITG08_07715 PF00176 SNF2 family N-terminal domain ITG08_07715 PF12137 RNA polymerase recycling family C-terminal ITG08_07715 PF00271 Helicase conserved C-terminal domain ITG08_07725 PF00849 RNA pseudouridylate synthase ITG08_07730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ITG08_07730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ITG08_07735 PF00582 Universal stress protein family ITG08_07750 PF01316 Arginine repressor, DNA binding domain ITG08_07750 PF02863 Arginine repressor, C-terminal domain ITG08_07755 PF00056 lactate/malate dehydrogenase, NAD binding domain ITG08_07755 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ITG08_07765 PF00348 Polyprenyl synthetase ITG08_07770 PF00829 Ribosomal prokaryotic L21 protein ITG08_07775 PF01016 Ribosomal L27 protein ITG08_07780 PF01018 GTP1/OBG ITG08_07780 PF01926 50S ribosome-binding GTPase ITG08_07785 PF06738 Putative threonine/serine exporter ITG08_07790 PF12821 Threonine/Serine exporter, ThrE ITG08_07795 PF00186 Dihydrofolate reductase ITG08_07800 PF00149 Calcineurin-like phosphoesterase ITG08_07805 PF04379 ApaG domain ITG08_07810 PF00398 Ribosomal RNA adenine dimethylase ITG08_07815 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ITG08_07820 PF00639 PPIC-type PPIASE domain ITG08_07820 PF09312 SurA N-terminal domain ITG08_07825 PF03968 OstA-like protein ITG08_07825 PF04453 LPS transport system D ITG08_07830 PF00226 DnaJ domain ITG08_07830 PF05099 Tellurite resistance protein TerB ITG08_07845 PF00694 Aconitase C-terminal domain ITG08_07850 PF00330 Aconitase family (aconitate hydratase) ITG08_07855 PF00180 Isocitrate/isopropylmalate dehydrogenase ITG08_07860 PF00682 HMGL-like ITG08_07860 PF08502 LeuA allosteric (dimerisation) domain ITG08_07875 PF00873 AcrB/AcrD/AcrF family ITG08_07880 PF01569 PAP2 superfamily ITG08_07890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_07890 PF03466 LysR substrate binding domain ITG08_07895 PF00501 AMP-binding enzyme ITG08_07900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ITG08_07900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ITG08_07900 PF00205 Thiamine pyrophosphate enzyme, central domain ITG08_07905 PF10369 Small subunit of acetolactate synthase ITG08_07910 PF00990 Diguanylate cyclase, GGDEF domain ITG08_07910 PF17158 Membrane-associated sensor, integral membrane domain ITG08_07920 PF00224 Pyruvate kinase, barrel domain ITG08_07920 PF02887 Pyruvate kinase, alpha/beta domain ITG08_07925 PF00455 DeoR C terminal sensor domain ITG08_07925 PF08220 DeoR-like helix-turn-helix domain ITG08_07930 PF01380 SIS domain ITG08_07935 PF01053 Cys/Met metabolism PLP-dependent enzyme ITG08_07945 PF04542 Sigma-70 region 2 ITG08_07945 PF04539 Sigma-70 region 3 ITG08_07945 PF04546 Sigma-70, non-essential region ITG08_07945 PF03979 Sigma-70 factor, region 1.1 ITG08_07945 PF00140 Sigma-70 factor, region 1.2 ITG08_07945 PF04545 Sigma-70, region 4 ITG08_07950 PF01807 CHC2 zinc finger ITG08_07950 PF08275 DNA primase catalytic core, N-terminal domain ITG08_07950 PF08278 DNA primase DnaG DnaB-binding ITG08_07950 PF10410 DnaB-helicase binding domain of primase ITG08_07955 PF09424 Yqey-like protein ITG08_07960 PF01165 Ribosomal protein S21 ITG08_07965 PF00814 Glycoprotease family ITG08_07970 PF12697 Alpha/beta hydrolase family ITG08_07975 PF02660 Glycerol-3-phosphate acyltransferase ITG08_07980 PF02152 Dihydroneopterin aldolase ITG08_07985 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ITG08_07990 PF02673 Bacitracin resistance protein BacA ITG08_07995 PF12627 Probable RNA and SrmB- binding site of polymerase A ITG08_07995 PF01743 Poly A polymerase head domain ITG08_07995 PF01966 HD domain ITG08_08000 PF13401 AAA domain ITG08_08000 PF01471 Putative peptidoglycan binding domain ITG08_08010 PF08239 Bacterial SH3 domain ITG08_08015 PF01384 Phosphate transporter family ITG08_08020 PF01865 Protein of unknown function DUF47 ITG08_08025 PF01928 CYTH domain ITG08_08030 PF07885 Ion channel ITG08_08035 PF02743 Cache domain ITG08_08035 PF00672 HAMP domain ITG08_08035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_08040 PF03710 Glutamate-ammonia ligase adenylyltransferase ITG08_08040 PF08335 GlnD PII-uridylyltransferase ITG08_08045 PF01467 Cytidylyltransferase-like ITG08_08045 PF00294 pfkB family carbohydrate kinase ITG08_08050 PF02321 Outer membrane efflux protein ITG08_08055 PF00293 NUDIX domain ITG08_08060 PF06853 Protein of unknown function (DUF1249) ITG08_08065 PF00149 Calcineurin-like phosphoesterase ITG08_08070 PF05728 Uncharacterised protein family (UPF0227) ITG08_08075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_08075 PF01751 Toprim domain ITG08_08075 PF00986 DNA gyrase B subunit, carboxyl terminus ITG08_08075 PF00204 DNA gyrase B ITG08_08080 PF00521 DNA gyrase/topoisomerase IV, subunit A ITG08_08080 PF03989 DNA gyrase C-terminal domain, beta-propeller ITG08_08085 PF13180 PDZ domain ITG08_08090 PF13180 PDZ domain ITG08_08090 PF00595 PDZ domain ITG08_08095 PF06295 Protein of unknown function (DUF1043) ITG08_08100 PF03969 AFG1-like ATPase ITG08_08105 PF00572 Ribosomal protein L13 ITG08_08110 PF00380 Ribosomal protein S9/S16 ITG08_08115 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ITG08_08115 PF00355 Rieske [2Fe-2S] domain ITG08_08120 PF00033 Cytochrome b/b6/petB ITG08_08120 PF00032 Cytochrome b(C-terminal)/b6/petD ITG08_08125 PF02167 Cytochrome C1 family ITG08_08130 PF02798 Glutathione S-transferase, N-terminal domain ITG08_08130 PF00043 Glutathione S-transferase, C-terminal domain ITG08_08135 PF04386 Stringent starvation protein B ITG08_08140 PF04972 BON domain ITG08_08145 PF13580 SIS domain ITG08_08150 PF02021 Uncharacterised protein family UPF0102 ITG08_08155 PF04348 LppC putative lipoprotein ITG08_08160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ITG08_08170 PF01795 MraW methylase family ITG08_08175 PF04999 Cell division protein FtsL ITG08_08180 PF00905 Penicillin binding protein transpeptidase domain ITG08_08180 PF03717 Penicillin-binding Protein dimerisation domain ITG08_08185 PF08245 Mur ligase middle domain ITG08_08185 PF02875 Mur ligase family, glutamate ligase domain ITG08_08185 PF01225 Mur ligase family, catalytic domain ITG08_08190 PF01225 Mur ligase family, catalytic domain ITG08_08190 PF08245 Mur ligase middle domain ITG08_08190 PF02875 Mur ligase family, glutamate ligase domain ITG08_08195 PF00953 Glycosyl transferase family 4 ITG08_08195 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ITG08_08200 PF02875 Mur ligase family, glutamate ligase domain ITG08_08200 PF08245 Mur ligase middle domain ITG08_08205 PF01098 Cell cycle protein ITG08_08210 PF03033 Glycosyltransferase family 28 N-terminal domain ITG08_08210 PF04101 Glycosyltransferase family 28 C-terminal domain ITG08_08215 PF01225 Mur ligase family, catalytic domain ITG08_08215 PF02875 Mur ligase family, glutamate ligase domain ITG08_08215 PF08245 Mur ligase middle domain ITG08_08220 PF03799 Cell division protein FtsQ ITG08_08220 PF08478 POTRA domain, FtsQ-type ITG08_08225 PF02491 SHS2 domain inserted in FTSA ITG08_08230 PF00091 Tubulin/FtsZ family, GTPase domain ITG08_08230 PF12327 FtsZ family, C-terminal domain ITG08_08235 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ITG08_08240 PF01043 SecA preprotein cross-linking domain ITG08_08240 PF07517 SecA DEAD-like domain ITG08_08240 PF02810 SEC-C motif ITG08_08240 PF07516 SecA Wing and Scaffold domain ITG08_08245 PF00293 NUDIX domain ITG08_08250 PF05173 Dihydrodipicolinate reductase, C-terminus ITG08_08250 PF01113 Dihydrodipicolinate reductase, N-terminus ITG08_08255 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ITG08_08255 PF00117 Glutamine amidotransferase class-I ITG08_08260 PF02142 MGS-like domain ITG08_08260 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ITG08_08260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ITG08_08265 PF01925 Sulfite exporter TauE/SafE ITG08_08270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_08270 PF03466 LysR substrate binding domain ITG08_08275 PF03458 UPF0126 domain ITG08_08280 PF01497 Periplasmic binding protein ITG08_08290 PF01048 Phosphorylase superfamily ITG08_08300 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ITG08_08300 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG08_08305 PF01645 Conserved region in glutamate synthase ITG08_08305 PF00310 Glutamine amidotransferases class-II ITG08_08305 PF04898 Glutamate synthase central domain ITG08_08305 PF01493 GXGXG motif ITG08_08310 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG08_08310 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ITG08_08315 PF01493 GXGXG motif ITG08_08315 PF01645 Conserved region in glutamate synthase ITG08_08315 PF04898 Glutamate synthase central domain ITG08_08315 PF00310 Glutamine amidotransferases class-II ITG08_08320 PF16199 Radical_SAM C-terminal domain ITG08_08320 PF04055 Radical SAM superfamily ITG08_08325 PF01590 GAF domain ITG08_08325 PF00990 Diguanylate cyclase, GGDEF domain ITG08_08325 PF00360 Phytochrome region ITG08_08325 PF00563 EAL domain ITG08_08330 PF01627 Hpt domain ITG08_08330 PF00512 His Kinase A (phospho-acceptor) domain ITG08_08330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_08330 PF18415 Histidine kinase receptor ArcB trans-membrane domain ITG08_08330 PF00989 PAS fold ITG08_08330 PF00072 Response regulator receiver domain ITG08_08340 PF00072 Response regulator receiver domain ITG08_08340 PF00486 Transcriptional regulatory protein, C terminal ITG08_08350 PF03737 Aldolase/RraA ITG08_08360 PF00696 Amino acid kinase family ITG08_08360 PF01842 ACT domain ITG08_08360 PF13840 ACT domain ITG08_08360 PF00742 Homoserine dehydrogenase ITG08_08360 PF03447 Homoserine dehydrogenase, NAD binding domain ITG08_08365 PF08544 GHMP kinases C terminal ITG08_08365 PF00288 GHMP kinases N terminal domain ITG08_08370 PF00291 Pyridoxal-phosphate dependent enzyme ITG08_08370 PF14821 Threonine synthase N terminus ITG08_08375 PF01228 Glycine radical ITG08_08380 PF01261 Xylose isomerase-like TIM barrel ITG08_08385 PF03167 Uracil DNA glycosylase superfamily ITG08_08400 PF01235 Sodium:alanine symporter family ITG08_08405 PF03883 Peroxide stress protein YaaA ITG08_08410 PF00271 Helicase conserved C-terminal domain ITG08_08410 PF00270 DEAD/DEAH box helicase ITG08_08415 PF05175 Methyltransferase small domain ITG08_08420 PF05525 Branched-chain amino acid transport protein ITG08_08425 PF00258 Flavodoxin ITG08_08430 PF00589 Phage integrase family ITG08_08430 PF02899 Phage integrase, N-terminal SAM-like domain ITG08_08435 PF13098 Thioredoxin-like domain ITG08_08435 PF10411 Disulfide bond isomerase protein N-terminus ITG08_08440 PF02272 DHHA1 domain ITG08_08440 PF17768 RecJ OB domain ITG08_08440 PF01368 DHH family ITG08_08450 PF00152 tRNA synthetases class II (D, K and N) ITG08_08450 PF01336 OB-fold nucleic acid binding domain ITG08_08455 PF02954 Bacterial regulatory protein, Fis family ITG08_08455 PF00989 PAS fold ITG08_08455 PF00158 Sigma-54 interaction domain ITG08_08470 PF02976 DNA mismatch repair enzyme MutH ITG08_08475 PF00293 NUDIX domain ITG08_08480 PF05524 PEP-utilising enzyme, N-terminal ITG08_08480 PF00391 PEP-utilising enzyme, mobile domain ITG08_08480 PF02896 PEP-utilising enzyme, TIM barrel domain ITG08_08480 PF01590 GAF domain ITG08_08485 PF01925 Sulfite exporter TauE/SafE ITG08_08490 PF01790 Prolipoprotein diacylglyceryl transferase ITG08_08495 PF00303 Thymidylate synthase ITG08_08500 PF02690 Na+/Pi-cotransporter ITG08_08505 PF03466 LysR substrate binding domain ITG08_08505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_08510 PF01022 Bacterial regulatory protein, arsR family ITG08_08515 PF01649 Ribosomal protein S20 ITG08_08520 PF03023 Lipid II flippase MurJ ITG08_08525 PF01687 Riboflavin kinase ITG08_08525 PF06574 FAD synthetase ITG08_08530 PF06827 Zinc finger found in FPG and IleRS ITG08_08530 PF00133 tRNA synthetases class I (I, L, M and V) ITG08_08530 PF08264 Anticodon-binding domain of tRNA ITG08_08535 PF01252 Signal peptidase (SPase) II ITG08_08540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ITG08_08545 PF02401 LytB protein ITG08_08550 PF00072 Response regulator receiver domain ITG08_08550 PF04397 LytTr DNA-binding domain ITG08_08555 PF06580 Histidine kinase ITG08_08555 PF07694 5TMR of 5TMR-LYT ITG08_08560 PF02554 Carbon starvation protein CstA ITG08_08570 PF13580 SIS domain ITG08_08575 PF03702 Anhydro-N-acetylmuramic acid kinase ITG08_08580 PF00933 Glycosyl hydrolase family 3 N terminal domain ITG08_08585 PF00793 DAHP synthetase I family ITG08_08590 PF01817 Chorismate mutase type II ITG08_08590 PF02153 Prephenate dehydrogenase ITG08_08595 PF04225 Opacity-associated protein A LysM-like domain ITG08_08595 PF01551 Peptidase family M23 ITG08_08600 PF07238 PilZ domain ITG08_08605 PF00005 ABC transporter ITG08_08605 PF12848 ABC transporter ITG08_08610 PF14718 Soluble lytic murein transglycosylase L domain ITG08_08610 PF01464 Transglycosylase SLT domain ITG08_08615 PF01371 Trp repressor protein ITG08_08620 PF01931 Protein of unknown function DUF84 ITG08_08625 PF00990 Diguanylate cyclase, GGDEF domain ITG08_08625 PF00563 EAL domain ITG08_08630 PF00800 Prephenate dehydratase ITG08_08630 PF01817 Chorismate mutase type II ITG08_08635 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ITG08_08640 PF01464 Transglycosylase SLT domain ITG08_08645 PF13525 Outer membrane lipoprotein ITG08_08650 PF00849 RNA pseudouridylate synthase ITG08_08650 PF01479 S4 domain ITG08_08655 PF02578 Multi-copper polyphenol oxidoreductase laccase ITG08_08660 PF10431 C-terminal, D2-small domain, of ClpB protein ITG08_08660 PF02861 Clp amino terminal domain, pathogenicity island component ITG08_08660 PF17871 AAA lid domain ITG08_08660 PF07724 AAA domain (Cdc48 subfamily) ITG08_08660 PF00004 ATPase family associated with various cellular activities (AAA) ITG08_08695 PF03411 Penicillin-insensitive murein endopeptidase ITG08_08705 PF12838 4Fe-4S dicluster domain ITG08_08710 PF16325 Peptidase family U32 C-terminal domain ITG08_08710 PF01136 Peptidase family U32 ITG08_08715 PF04381 Putative exonuclease, RdgC ITG08_08720 PF00072 Response regulator receiver domain ITG08_08720 PF00486 Transcriptional regulatory protein, C terminal ITG08_08725 PF00989 PAS fold ITG08_08725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_08725 PF00512 His Kinase A (phospho-acceptor) domain ITG08_08725 PF11808 Phosphate regulon sensor protein PhoR ITG08_08730 PF12849 PBP superfamily domain ITG08_08735 PF02541 Ppx/GppA phosphatase family ITG08_08740 PF13089 Polyphosphate kinase N-terminal domain ITG08_08740 PF17941 Polyphosphate kinase C-terminal domain 1 ITG08_08740 PF13090 Polyphosphate kinase C-terminal domain 2 ITG08_08740 PF02503 Polyphosphate kinase middle domain ITG08_08745 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_08750 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_08755 PF00005 ABC transporter ITG08_08760 PF01895 PhoU domain ITG08_08775 PF03466 LysR substrate binding domain ITG08_08775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_08780 PF03932 CutC family ITG08_08785 PF10417 C-terminal domain of 1-Cys peroxiredoxin ITG08_08785 PF00578 AhpC/TSA family ITG08_08790 PF03466 LysR substrate binding domain ITG08_08790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_08795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_08800 PF00571 CBS domain ITG08_08805 PF02547 Queuosine biosynthesis protein ITG08_08810 PF01702 Queuine tRNA-ribosyltransferase ITG08_08815 PF02699 Preprotein translocase subunit ITG08_08820 PF07549 SecD/SecF GG Motif ITG08_08820 PF13721 SecD export protein N-terminal TM region ITG08_08820 PF02355 Protein export membrane protein ITG08_08825 PF07549 SecD/SecF GG Motif ITG08_08825 PF02355 Protein export membrane protein ITG08_08830 PF00459 Inositol monophosphatase family ITG08_08835 PF00588 SpoU rRNA Methylase family ITG08_08840 PF02082 Transcriptional regulator ITG08_08845 PF00266 Aminotransferase class-V ITG08_08850 PF01592 NifU-like N terminal domain ITG08_08855 PF01521 Iron-sulphur cluster biosynthesis ITG08_08860 PF07743 HSCB C-terminal oligomerisation domain ITG08_08860 PF00226 DnaJ domain ITG08_08865 PF00012 Hsp70 protein ITG08_08870 PF00111 2Fe-2S iron-sulfur cluster binding domain ITG08_08875 PF04384 Iron-sulphur cluster assembly ITG08_08880 PF00883 Cytosol aminopeptidase family, catalytic domain ITG08_08880 PF12404 Peptidase ITG08_08885 PF00334 Nucleoside diphosphate kinase ITG08_08890 PF04055 Radical SAM superfamily ITG08_08895 PF13464 Domain of unknown function (DUF4115) ITG08_08900 PF04551 GcpE protein ITG08_08905 PF03129 Anticodon binding domain ITG08_08905 PF13393 Histidyl-tRNA synthetase ITG08_08910 PF09976 Tetratricopeptide repeat-like domain ITG08_08915 PF13360 PQQ-like domain ITG08_08920 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ITG08_08920 PF01926 50S ribosome-binding GTPase ITG08_08925 PF02272 DHHA1 domain ITG08_08925 PF01411 tRNA synthetases class II (A) ITG08_08925 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ITG08_08930 PF00990 Diguanylate cyclase, GGDEF domain ITG08_08930 PF08448 PAS fold ITG08_08945 PF02653 Branched-chain amino acid transport system / permease component ITG08_08955 PF00005 ABC transporter ITG08_08955 PF12399 Branched-chain amino acid ATP-binding cassette transporter ITG08_08960 PF00005 ABC transporter ITG08_08965 PF01774 UreD urease accessory protein ITG08_08970 PF00547 Urease, gamma subunit ITG08_08975 PF00699 Urease beta subunit ITG08_08980 PF01979 Amidohydrolase family ITG08_08980 PF00449 Urease alpha-subunit, N-terminal domain ITG08_08985 PF02814 UreE urease accessory protein, N-terminal domain ITG08_08985 PF05194 UreE urease accessory protein, C-terminal domain ITG08_08995 PF01730 UreF ITG08_09000 PF02492 CobW/HypB/UreG, nucleotide-binding domain ITG08_09005 PF13742 OB-fold nucleic acid binding domain ITG08_09005 PF02601 Exonuclease VII, large subunit ITG08_09010 PF00478 IMP dehydrogenase / GMP reductase domain ITG08_09010 PF00571 CBS domain ITG08_09015 PF02540 NAD synthase ITG08_09015 PF00958 GMP synthase C terminal domain ITG08_09015 PF00117 Glutamine amidotransferase class-I ITG08_09020 PF00704 Glycosyl hydrolases family 18 ITG08_09020 PF06483 Chitinase C ITG08_09025 PF03553 Na+/H+ antiporter family ITG08_09030 PF01184 GPR1/FUN34/yaaH family ITG08_09035 PF01235 Sodium:alanine symporter family ITG08_09040 PF00753 Metallo-beta-lactamase superfamily ITG08_09040 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ITG08_09040 PF10996 Beta-Casp domain ITG08_09045 PF01553 Acyltransferase ITG08_09070 PF18030 RimK PreATP-grasp domain ITG08_09070 PF08443 RimK-like ATP-grasp domain ITG08_09080 PF01668 SmpB protein ITG08_09085 PF03364 Polyketide cyclase / dehydrase and lipid transport ITG08_09090 PF03658 RnfH family Ubiquitin ITG08_09095 PF04355 SmpA / OmlA family ITG08_09100 PF02463 RecF/RecN/SMC N terminal domain ITG08_09105 PF01513 ATP-NAD kinase ITG08_09110 PF01025 GrpE ITG08_09115 PF00375 Sodium:dicarboxylate symporter family ITG08_09125 PF00012 Hsp70 protein ITG08_09130 PF00226 DnaJ domain ITG08_09130 PF01556 DnaJ C terminal domain ITG08_09130 PF00684 DnaJ central domain ITG08_09135 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor ITG08_09135 PF07963 Prokaryotic N-terminal methylation motif ITG08_09160 PF03806 AbgT putative transporter family ITG08_09165 PF00571 CBS domain ITG08_09165 PF03471 Transporter associated domain ITG08_09165 PF01595 Cyclin M transmembrane N-terminal domain ITG08_09170 PF14437 MafB19-like deaminase ITG08_09175 PF00497 Bacterial extracellular solute-binding proteins, family 3 ITG08_09175 PF01464 Transglycosylase SLT domain ITG08_09180 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ITG08_09180 PF02769 AIR synthase related protein, C-terminal domain ITG08_09180 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ITG08_09190 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle ITG08_09190 PF14602 Hexapeptide repeat of succinyl-transferase ITG08_09195 PF02872 5'-nucleotidase, C-terminal domain ITG08_09195 PF00149 Calcineurin-like phosphoesterase ITG08_09200 PF01914 MarC family integral membrane protein ITG08_09215 PF07130 YebG protein ITG08_09220 PF03466 LysR substrate binding domain ITG08_09220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_09230 PF17946 RecC C-terminal domain ITG08_09235 PF12705 PD-(D/E)XK nuclease superfamily ITG08_09235 PF00580 UvrD/REP helicase N-terminal domain ITG08_09235 PF13361 UvrD-like helicase C-terminal domain ITG08_09240 PF13538 UvrD-like helicase C-terminal domain ITG08_09250 PF00696 Amino acid kinase family ITG08_09250 PF00583 Acetyltransferase (GNAT) family ITG08_09260 PF03562 MltA specific insert domain ITG08_09260 PF06725 3D domain ITG08_09265 PF00899 ThiF family ITG08_09270 PF02657 Fe-S metabolism associated domain ITG08_09275 PF00266 Aminotransferase class-V ITG08_09280 PF02558 Ketopantoate reductase PanE/ApbA ITG08_09280 PF08546 Ketopantoate reductase PanE/ApbA C terminal ITG08_09285 PF03502 Nucleoside-specific channel-forming protein, Tsx ITG08_09295 PF07690 Major Facilitator Superfamily ITG08_09300 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ITG08_09310 PF05175 Methyltransferase small domain ITG08_09315 PF01722 BolA-like protein ITG08_09320 PF11973 NQRA C-terminal domain ITG08_09320 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) ITG08_09325 PF03116 NQR2, RnfD, RnfE family ITG08_09330 PF04205 FMN-binding domain ITG08_09335 PF02508 Rnf-Nqr subunit, membrane protein ITG08_09340 PF02508 Rnf-Nqr subunit, membrane protein ITG08_09345 PF00970 Oxidoreductase FAD-binding domain ITG08_09345 PF00111 2Fe-2S iron-sulfur cluster binding domain ITG08_09345 PF00175 Oxidoreductase NAD-binding domain ITG08_09350 PF02424 ApbE family ITG08_09355 PF04400 (Na+)-NQR maturation NqrM ITG08_09360 PF00072 Response regulator receiver domain ITG08_09360 PF00990 Diguanylate cyclase, GGDEF domain ITG08_09365 PF11798 IMS family HHH motif ITG08_09365 PF11799 impB/mucB/samB family C-terminal domain ITG08_09365 PF00817 impB/mucB/samB family ITG08_09370 PF09382 RQC domain ITG08_09370 PF00270 DEAD/DEAH box helicase ITG08_09370 PF00271 Helicase conserved C-terminal domain ITG08_09370 PF00570 HRDC domain ITG08_09370 PF16124 RecQ zinc-binding ITG08_09375 PF03449 Transcription elongation factor, N-terminal ITG08_09375 PF01272 Transcription elongation factor, GreA/GreB, C-term ITG08_09385 PF00209 Sodium:neurotransmitter symporter family ITG08_09390 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ITG08_09390 PF04055 Radical SAM superfamily ITG08_09395 PF03099 Biotin/lipoate A/B protein ligase family ITG08_09400 PF04359 Protein of unknown function (DUF493) ITG08_09405 PF07943 Penicillin-binding protein 5, C-terminal domain ITG08_09405 PF00768 D-alanyl-D-alanine carboxypeptidase ITG08_09410 PF03330 Lytic transglycolase ITG08_09410 PF05036 Sporulation related domain ITG08_09415 PF01098 Cell cycle protein ITG08_09420 PF03717 Penicillin-binding Protein dimerisation domain ITG08_09420 PF00905 Penicillin binding protein transpeptidase domain ITG08_09425 PF02590 Predicted SPOUT methyltransferase ITG08_09435 PF14840 Processivity clamp loader gamma complex DNA pol III C-term ITG08_09435 PF06144 DNA polymerase III, delta subunit ITG08_09440 PF04390 Lipopolysaccharide-assembly ITG08_09445 PF13603 Leucyl-tRNA synthetase, Domain 2 ITG08_09445 PF00133 tRNA synthetases class I (I, L, M and V) ITG08_09445 PF08264 Anticodon-binding domain of tRNA ITG08_09450 PF07295 Zinc-ribbon containing domain ITG08_09455 PF00795 Carbon-nitrogen hydrolase ITG08_09460 PF00571 CBS domain ITG08_09460 PF03471 Transporter associated domain ITG08_09465 PF02130 Uncharacterized protein family UPF0054 ITG08_09470 PF02562 PhoH-like protein ITG08_09475 PF04055 Radical SAM superfamily ITG08_09475 PF01938 TRAM domain ITG08_09475 PF00919 Uncharacterized protein family UPF0004 ITG08_09480 PF01494 FAD binding domain ITG08_09485 PF10282 Lactonase, 7-bladed beta-propeller ITG08_09585 PF06071 Protein of unknown function (DUF933) ITG08_09585 PF01926 50S ribosome-binding GTPase ITG08_09590 PF01195 Peptidyl-tRNA hydrolase ITG08_09595 PF14572 Phosphoribosyl synthetase-associated domain ITG08_09595 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ITG08_09600 PF08544 GHMP kinases C terminal ITG08_09600 PF00288 GHMP kinases N terminal domain ITG08_09605 PF03550 Outer membrane lipoprotein LolB ITG08_09610 PF01488 Shikimate / quinate 5-dehydrogenase ITG08_09610 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ITG08_09610 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ITG08_09615 PF03462 PCRF domain ITG08_09615 PF00472 RF-1 domain ITG08_09620 PF17827 PrmC N-terminal domain ITG08_09620 PF13847 Methyltransferase domain ITG08_09625 PF04247 Invasion gene expression up-regulator, SirB ITG08_09630 PF13369 Transglutaminase-like superfamily ITG08_09635 PF00793 DAHP synthetase I family ITG08_09640 PF02872 5'-nucleotidase, C-terminal domain ITG08_09640 PF00149 Calcineurin-like phosphoesterase ITG08_09645 PF04073 Aminoacyl-tRNA editing domain ITG08_09650 PF01479 S4 domain ITG08_09650 PF00849 RNA pseudouridylate synthase ITG08_09655 PF01713 Smr domain ITG08_09675 PF02838 Glycosyl hydrolase family 20, domain 2 ITG08_09675 PF03173 Putative carbohydrate binding domain ITG08_09675 PF00728 Glycosyl hydrolase family 20, catalytic domain ITG08_09675 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain ITG08_09690 PF00403 Heavy-metal-associated domain ITG08_09695 PF00749 tRNA synthetases class I (E and Q), catalytic domain ITG08_09705 PF02801 Beta-ketoacyl synthase, C-terminal domain ITG08_09705 PF00109 Beta-ketoacyl synthase, N-terminal domain ITG08_09720 PF00109 Beta-ketoacyl synthase, N-terminal domain ITG08_09720 PF02801 Beta-ketoacyl synthase, C-terminal domain ITG08_09745 PF00221 Aromatic amino acid lyase ITG08_09750 PF00535 Glycosyl transferase family 2 ITG08_09760 PF00501 AMP-binding enzyme ITG08_09760 PF13193 AMP-binding enzyme C-terminal domain ITG08_09770 PF00550 Phosphopantetheine attachment site ITG08_09775 PF00550 Phosphopantetheine attachment site ITG08_09800 PF04820 Tryptophan halogenase ITG08_09835 PF13144 Chaperone for flagella basal body P-ring formation ITG08_09840 PF01584 CheW-like domain ITG08_09840 PF00072 Response regulator receiver domain ITG08_09845 PF01739 CheR methyltransferase, SAM binding domain ITG08_09845 PF03705 CheR methyltransferase, all-alpha domain ITG08_09850 PF00460 Flagella basal body rod protein ITG08_09855 PF00460 Flagella basal body rod protein ITG08_09855 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ITG08_09860 PF03963 Flagellar hook capping protein - N-terminal region ITG08_09860 PF13860 FlgD Ig-like domain ITG08_09860 PF13861 FlgD Tudor-like domain ITG08_09865 PF07559 Flagellar basal body protein FlaE ITG08_09865 PF00460 Flagella basal body rod protein ITG08_09865 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ITG08_09870 PF00460 Flagella basal body rod protein ITG08_09870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ITG08_09875 PF00460 Flagella basal body rod protein ITG08_09875 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ITG08_09880 PF02107 Flagellar L-ring protein ITG08_09885 PF02119 Flagellar P-ring protein ITG08_09890 PF10135 Rod binding protein ITG08_09890 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ITG08_09895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ITG08_09895 PF07196 Flagellin hook IN motif ITG08_09905 PF07196 Flagellin hook IN motif ITG08_09905 PF00700 Bacterial flagellin C-terminal helical region ITG08_09905 PF00669 Bacterial flagellin N-terminal helical region ITG08_09910 PF00700 Bacterial flagellin C-terminal helical region ITG08_09910 PF00669 Bacterial flagellin N-terminal helical region ITG08_09910 PF07196 Flagellin hook IN motif ITG08_09915 PF07196 Flagellin hook IN motif ITG08_09915 PF00669 Bacterial flagellin N-terminal helical region ITG08_09915 PF00700 Bacterial flagellin C-terminal helical region ITG08_09920 PF03646 FlaG protein ITG08_09925 PF07196 Flagellin hook IN motif ITG08_09925 PF07195 Flagellar hook-associated protein 2 C-terminus ITG08_09925 PF02465 Flagellar hook-associated protein 2 N-terminus ITG08_09935 PF02561 Flagellar protein FliS ITG08_09940 PF06490 Flagellar regulatory protein FleQ ITG08_09940 PF00158 Sigma-54 interaction domain ITG08_09940 PF02954 Bacterial regulatory protein, Fis family ITG08_09945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_09945 PF13188 PAS domain ITG08_09945 PF00512 His Kinase A (phospho-acceptor) domain ITG08_09950 PF00158 Sigma-54 interaction domain ITG08_09950 PF02954 Bacterial regulatory protein, Fis family ITG08_09950 PF00072 Response regulator receiver domain ITG08_09955 PF02049 Flagellar hook-basal body complex protein FliE ITG08_09960 PF01514 Secretory protein of YscJ/FliF family ITG08_09960 PF08345 Flagellar M-ring protein C-terminal ITG08_09965 PF14841 FliG middle domain ITG08_09965 PF01706 FliG C-terminal domain ITG08_09965 PF14842 FliG N-terminal domain ITG08_09975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ITG08_09975 PF18269 T3SS EscN ATPase C-terminal domain ITG08_09995 PF02154 Flagellar motor switch protein FliM ITG08_09995 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ITG08_10000 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ITG08_10005 PF04347 Flagellar biosynthesis protein, FliO ITG08_10010 PF00813 FliP family ITG08_10015 PF01313 Bacterial export proteins, family 3 ITG08_10020 PF01311 Bacterial export proteins, family 1 ITG08_10025 PF01312 FlhB HrpN YscU SpaS Family ITG08_10030 PF00771 FHIPEP family ITG08_10035 PF00448 SRP54-type protein, GTPase domain ITG08_10040 PF10609 NUBPL iron-transfer P-loop NTPase ITG08_10045 PF04545 Sigma-70, region 4 ITG08_10045 PF04542 Sigma-70 region 2 ITG08_10045 PF04539 Sigma-70 region 3 ITG08_10050 PF00072 Response regulator receiver domain ITG08_10055 PF04344 Chemotaxis phosphatase, CheZ ITG08_10060 PF01627 Hpt domain ITG08_10060 PF01584 CheW-like domain ITG08_10060 PF02895 Signal transducing histidine kinase, homodimeric domain ITG08_10060 PF00072 Response regulator receiver domain ITG08_10060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_10065 PF00072 Response regulator receiver domain ITG08_10065 PF01339 CheB methylesterase ITG08_10070 PF13614 AAA domain ITG08_10080 PF01584 CheW-like domain ITG08_10090 PF00005 ABC transporter ITG08_10095 PF03379 CcmB protein ITG08_10100 PF01578 Cytochrome C assembly protein ITG08_10105 PF04995 Heme exporter protein D (CcmD) ITG08_10110 PF03100 CcmE ITG08_10115 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ITG08_10115 PF01578 Cytochrome C assembly protein ITG08_10120 PF08534 Redoxin ITG08_10125 PF03918 Cytochrome C biogenesis protein ITG08_10130 PF03918 Cytochrome C biogenesis protein ITG08_10135 PF04333 MlaA lipoprotein ITG08_10140 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ITG08_10145 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ITG08_10155 PF04542 Sigma-70 region 2 ITG08_10155 PF08281 Sigma-70, region 4 ITG08_10160 PF02803 Thiolase, C-terminal domain ITG08_10160 PF00108 Thiolase, N-terminal domain ITG08_10165 PF00378 Enoyl-CoA hydratase/isomerase ITG08_10165 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ITG08_10165 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ITG08_10170 PF16187 Middle or third domain of peptidase_M16 ITG08_10170 PF00675 Insulinase (Peptidase family M16) ITG08_10170 PF05193 Peptidase M16 inactive domain ITG08_10175 PF00300 Histidine phosphatase superfamily (branch 1) ITG08_10180 PF01713 Smr domain ITG08_10185 PF05175 Methyltransferase small domain ITG08_10190 PF01810 LysE type translocator ITG08_10195 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ITG08_10200 PF00486 Transcriptional regulatory protein, C terminal ITG08_10200 PF00072 Response regulator receiver domain ITG08_10205 PF00672 HAMP domain ITG08_10205 PF00512 His Kinase A (phospho-acceptor) domain ITG08_10205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_10210 PF01547 Bacterial extracellular solute-binding protein ITG08_10215 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_10220 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_10225 PF00005 ABC transporter ITG08_10225 PF17912 MalK OB fold domain ITG08_10225 PF03459 TOBE domain ITG08_10230 PF13167 GTP-binding GTPase N-terminal ITG08_10230 PF16360 GTP-binding GTPase Middle Region ITG08_10230 PF01926 50S ribosome-binding GTPase ITG08_10235 PF00698 Acyl transferase domain ITG08_10235 PF03060 Nitronate monooxygenase ITG08_10240 PF14765 Polyketide synthase dehydratase ITG08_10240 PF00550 Phosphopantetheine attachment site ITG08_10240 PF08659 KR domain ITG08_10240 PF02801 Beta-ketoacyl synthase, C-terminal domain ITG08_10240 PF00109 Beta-ketoacyl synthase, N-terminal domain ITG08_10240 PF16197 Ketoacyl-synthetase C-terminal extension ITG08_10240 PF00698 Acyl transferase domain ITG08_10250 PF14765 Polyketide synthase dehydratase ITG08_10250 PF00550 Phosphopantetheine attachment site ITG08_10250 PF00109 Beta-ketoacyl synthase, N-terminal domain ITG08_10250 PF02801 Beta-ketoacyl synthase, C-terminal domain ITG08_10250 PF08659 KR domain ITG08_10250 PF16197 Ketoacyl-synthetase C-terminal extension ITG08_10250 PF00698 Acyl transferase domain ITG08_10255 PF01648 4'-phosphopantetheinyl transferase superfamily ITG08_10265 PF03480 Bacterial extracellular solute-binding protein, family 7 ITG08_10270 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ITG08_10275 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ITG08_10285 PF02954 Bacterial regulatory protein, Fis family ITG08_10285 PF00072 Response regulator receiver domain ITG08_10285 PF00158 Sigma-54 interaction domain ITG08_10290 PF00512 His Kinase A (phospho-acceptor) domain ITG08_10290 PF02743 Cache domain ITG08_10290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_10300 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ITG08_10300 PF05697 Bacterial trigger factor protein (TF) ITG08_10300 PF05698 Bacterial trigger factor protein (TF) C-terminus ITG08_10305 PF00574 Clp protease ITG08_10310 PF07724 AAA domain (Cdc48 subfamily) ITG08_10310 PF10431 C-terminal, D2-small domain, of ClpB protein ITG08_10310 PF06689 ClpX C4-type zinc finger ITG08_10315 PF00004 ATPase family associated with various cellular activities (AAA) ITG08_10315 PF05362 Lon protease (S16) C-terminal proteolytic domain ITG08_10315 PF02190 ATP-dependent protease La (LON) substrate-binding domain ITG08_10320 PF00216 Bacterial DNA-binding protein ITG08_10325 PF13145 PPIC-type PPIASE domain ITG08_10345 PF13286 Phosphohydrolase-associated domain ITG08_10345 PF01966 HD domain ITG08_10355 PF00155 Aminotransferase class I and II ITG08_10360 PF00425 chorismate binding enzyme ITG08_10365 PF16582 Middle domain of thiamine pyrophosphate ITG08_10365 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ITG08_10365 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ITG08_10370 PF00561 alpha/beta hydrolase fold ITG08_10375 PF00378 Enoyl-CoA hydratase/isomerase ITG08_10380 PF13378 Enolase C-terminal domain-like ITG08_10385 PF00501 AMP-binding enzyme ITG08_10385 PF13193 AMP-binding enzyme C-terminal domain ITG08_10390 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ITG08_10390 PF00367 phosphotransferase system, EIIB ITG08_10390 PF02378 Phosphotransferase system, EIIC ITG08_10395 PF03466 LysR substrate binding domain ITG08_10395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_10405 PF03601 Conserved hypothetical protein 698 ITG08_10410 PF07690 Major Facilitator Superfamily ITG08_10465 PF13533 Biotin-lipoyl like ITG08_10470 PF00873 AcrB/AcrD/AcrF family ITG08_10480 PF00291 Pyridoxal-phosphate dependent enzyme ITG08_10485 PF01037 Lrp/AsnC ligand binding domain ITG08_10485 PF13404 AsnC-type helix-turn-helix domain ITG08_10500 PF09619 Type III secretion system lipoprotein chaperone (YscW) ITG08_10505 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ITG08_10520 PF00497 Bacterial extracellular solute-binding proteins, family 3 ITG08_10550 PF01693 Caulimovirus viroplasmin ITG08_10555 PF13439 Glycosyltransferase Family 4 ITG08_10555 PF00534 Glycosyl transferases group 1 ITG08_10560 PF00535 Glycosyl transferase family 2 ITG08_10580 PF00255 Glutathione peroxidase ITG08_10585 PF03109 ABC1 family ITG08_10600 PF00376 MerR family regulatory protein ITG08_10600 PF09278 MerR, DNA binding ITG08_10625 PF00884 Sulfatase ITG08_10630 PF00356 Bacterial regulatory proteins, lacI family ITG08_10645 PF07690 Major Facilitator Superfamily ITG08_10650 PF00474 Sodium:solute symporter family ITG08_10655 PF03315 Serine dehydratase beta chain ITG08_10655 PF03313 Serine dehydratase alpha chain ITG08_10660 PF01037 Lrp/AsnC ligand binding domain ITG08_10665 PF01810 LysE type translocator ITG08_10670 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG08_10670 PF13192 Thioredoxin domain ITG08_10675 PF10417 C-terminal domain of 1-Cys peroxiredoxin ITG08_10675 PF00578 AhpC/TSA family ITG08_10685 PF00860 Permease family ITG08_10695 PF13419 Haloacid dehalogenase-like hydrolase ITG08_10705 PF03330 Lytic transglycolase ITG08_10705 PF05036 Sporulation related domain ITG08_10710 PF02833 DHHA2 domain ITG08_10710 PF01368 DHH family ITG08_10730 PF00589 Phage integrase family ITG08_10730 PF02899 Phage integrase, N-terminal SAM-like domain ITG08_10740 PF05656 Protein of unknown function (DUF805) ITG08_10750 PF01548 Transposase ITG08_10750 PF02371 Transposase IS116/IS110/IS902 family ITG08_10770 PF01979 Amidohydrolase family ITG08_10785 PF08212 Lipocalin-like domain ITG08_10795 PF08803 Putative mono-oxygenase ydhR ITG08_10800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_10800 PF03466 LysR substrate binding domain ITG08_10805 PF17932 Tetracyclin repressor-like, C-terminal domain ITG08_10805 PF00440 Bacterial regulatory proteins, tetR family ITG08_10815 PF00873 AcrB/AcrD/AcrF family ITG08_10820 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ITG08_10820 PF06481 COX Aromatic Rich Motif ITG08_10825 PF00115 Cytochrome C and Quinol oxidase polypeptide I ITG08_10830 PF00510 Cytochrome c oxidase subunit III ITG08_10835 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ITG08_10840 PF01040 UbiA prenyltransferase family ITG08_10845 PF10502 Signal peptidase, peptidase S26 ITG08_10860 PF14864 Alkyl sulfatase C-terminal ITG08_10860 PF14863 Alkyl sulfatase dimerisation ITG08_10860 PF00753 Metallo-beta-lactamase superfamily ITG08_10880 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ITG08_10885 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ITG08_10895 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ITG08_10905 PF02885 Glycosyl transferase family, helical bundle domain ITG08_10905 PF00591 Glycosyl transferase family, a/b domain ITG08_10920 PF00571 CBS domain ITG08_10920 PF01743 Poly A polymerase head domain ITG08_10925 PF01554 MatE ITG08_10930 PF00403 Heavy-metal-associated domain ITG08_10935 PF01048 Phosphorylase superfamily ITG08_10945 PF00672 HAMP domain ITG08_10945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_10950 PF01230 HIT domain ITG08_10965 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ITG08_10965 PF13036 Peptidoglycan-synthase activator LpoB ITG08_10975 PF05728 Uncharacterised protein family (UPF0227) ITG08_10980 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG08_10985 PF13302 Acetyltransferase (GNAT) domain ITG08_10995 PF03461 TRCF domain ITG08_10995 PF00271 Helicase conserved C-terminal domain ITG08_10995 PF00270 DEAD/DEAH box helicase ITG08_10995 PF02559 CarD-like/TRCF domain ITG08_10995 PF17757 UvrB interaction domain ITG08_11005 PF12704 MacB-like periplasmic core domain ITG08_11005 PF02687 FtsX-like permease family ITG08_11010 PF00005 ABC transporter ITG08_11015 PF02687 FtsX-like permease family ITG08_11015 PF12704 MacB-like periplasmic core domain ITG08_11025 PF00753 Metallo-beta-lactamase superfamily ITG08_11025 PF03772 Competence protein ITG08_11030 PF00005 ABC transporter ITG08_11030 PF00664 ABC transporter transmembrane region ITG08_11035 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ITG08_11040 PF03966 Trm112p-like protein ITG08_11045 PF02348 Cytidylyltransferase ITG08_11050 PF02224 Cytidylate kinase ITG08_11055 PF00575 S1 RNA binding domain ITG08_11060 PF00216 Bacterial DNA-binding protein ITG08_11065 PF06305 Lipopolysaccharide assembly protein A domain ITG08_11070 PF18073 Rubredoxin metal binding domain ITG08_11075 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ITG08_11080 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) ITG08_11090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_11090 PF03466 LysR substrate binding domain ITG08_11100 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ITG08_11100 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ITG08_11105 PF01037 Lrp/AsnC ligand binding domain ITG08_11110 PF17854 FtsK alpha domain ITG08_11110 PF01580 FtsK/SpoIIIE family ITG08_11110 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ITG08_11110 PF09397 Ftsk gamma domain ITG08_11115 PF03548 Outer membrane lipoprotein carrier protein LolA ITG08_11120 PF00004 ATPase family associated with various cellular activities (AAA) ITG08_11120 PF12002 MgsA AAA+ ATPase C terminal ITG08_11120 PF16193 AAA C-terminal domain ITG08_11125 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ITG08_11125 PF02403 Seryl-tRNA synthetase N-terminal domain ITG08_11130 PF01258 Prokaryotic dksA/traR C4-type zinc finger ITG08_11135 PF00202 Aminotransferase class-III ITG08_11140 PF06968 Biotin and Thiamin Synthesis associated domain ITG08_11140 PF04055 Radical SAM superfamily ITG08_11145 PF00155 Aminotransferase class I and II ITG08_11150 PF08241 Methyltransferase domain ITG08_11165 PF01435 Peptidase family M48 ITG08_11170 PF08328 Adenylosuccinate lyase C-terminal ITG08_11170 PF00206 Lyase ITG08_11175 PF04356 Protein of unknown function (DUF489) ITG08_11190 PF00294 pfkB family carbohydrate kinase ITG08_11195 PF00816 H-NS histone family ITG08_11200 PF03553 Na+/H+ antiporter family ITG08_11205 PF01634 ATP phosphoribosyltransferase ITG08_11205 PF08029 HisG, C-terminal domain ITG08_11210 PF00815 Histidinol dehydrogenase ITG08_11215 PF00155 Aminotransferase class I and II ITG08_11220 PF00475 Imidazoleglycerol-phosphate dehydratase ITG08_11220 PF08645 Polynucleotide kinase 3 phosphatase ITG08_11225 PF00117 Glutamine amidotransferase class-I ITG08_11230 PF00977 Histidine biosynthesis protein ITG08_11235 PF00977 Histidine biosynthesis protein ITG08_11240 PF01502 Phosphoribosyl-AMP cyclohydrolase ITG08_11240 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ITG08_11245 PF02810 SEC-C motif ITG08_11250 PF00563 EAL domain ITG08_11250 PF08668 HDOD domain ITG08_11255 PF00149 Calcineurin-like phosphoesterase ITG08_11260 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ITG08_11265 PF01406 tRNA synthetases class I (C) catalytic domain ITG08_11265 PF09190 DALR domain ITG08_11270 PF00265 Thymidine kinase ITG08_11295 PF01226 Formate/nitrite transporter ITG08_11300 PF03649 Uncharacterised protein family (UPF0014) ITG08_11305 PF06796 Periplasmic nitrate reductase protein NapE ITG08_11310 PF03264 NapC/NirT cytochrome c family, N-terminal region ITG08_11315 PF18364 Molybdopterin oxidoreductase N-terminal domain ITG08_11315 PF01568 Molydopterin dinucleotide binding domain ITG08_11315 PF00384 Molybdopterin oxidoreductase ITG08_11325 PF01368 DHH family ITG08_11325 PF02833 DHHA2 domain ITG08_11340 PF00005 ABC transporter ITG08_11345 PF00005 ABC transporter ITG08_11345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ITG08_11350 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_11350 PF12911 N-terminal TM domain of oligopeptide transport permease C ITG08_11355 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_11360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ITG08_11365 PF00158 Sigma-54 interaction domain ITG08_11365 PF02954 Bacterial regulatory protein, Fis family ITG08_11370 PF04012 PspA/IM30 family ITG08_11375 PF06667 Phage shock protein B ITG08_11380 PF04024 PspC domain ITG08_11385 PF00529 HlyD membrane-fusion protein of T1SS ITG08_11385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG08_11390 PF13533 Biotin-lipoyl like ITG08_11395 PF00873 AcrB/AcrD/AcrF family ITG08_11400 PF03352 Methyladenine glycosylase ITG08_11405 PF01053 Cys/Met metabolism PLP-dependent enzyme ITG08_11410 PF13091 PLD-like domain ITG08_11410 PF13396 Phospholipase_D-nuclease N-terminal ITG08_11415 PF00209 Sodium:neurotransmitter symporter family ITG08_11420 PF12729 Four helix bundle sensory module for signal transduction ITG08_11420 PF00672 HAMP domain ITG08_11420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_11425 PF00849 RNA pseudouridylate synthase ITG08_11430 PF10672 S-adenosylmethionine-dependent methyltransferase ITG08_11430 PF01170 Putative RNA methylase family UPF0020 ITG08_11430 PF02926 THUMP domain ITG08_11435 PF01066 CDP-alcohol phosphatidyltransferase ITG08_11440 PF00005 ABC transporter ITG08_11445 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_11450 PF13416 Bacterial extracellular solute-binding protein ITG08_11460 PF06945 Protein of unknown function (DUF1289) ITG08_11470 PF01910 Thiamine-binding protein ITG08_11480 PF00271 Helicase conserved C-terminal domain ITG08_11480 PF00270 DEAD/DEAH box helicase ITG08_11490 PF00246 Zinc carboxypeptidase ITG08_11490 PF18027 Cytosolic carboxypeptidase N-terminal domain ITG08_11510 PF00571 CBS domain ITG08_11510 PF00005 ABC transporter ITG08_11515 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_11520 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ITG08_11530 PF03466 LysR substrate binding domain ITG08_11530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_11610 PF02371 Transposase IS116/IS110/IS902 family ITG08_11610 PF01548 Transposase ITG08_11615 PF01548 Transposase ITG08_11615 PF02371 Transposase IS116/IS110/IS902 family ITG08_11625 PF01548 Transposase ITG08_11625 PF02371 Transposase IS116/IS110/IS902 family ITG08_11655 PF01386 Ribosomal L25p family ITG08_11660 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 ITG08_11660 PF00535 Glycosyl transferase family 2 ITG08_11675 PF00672 HAMP domain ITG08_11675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_11675 PF00512 His Kinase A (phospho-acceptor) domain ITG08_11680 PF00072 Response regulator receiver domain ITG08_11680 PF00486 Transcriptional regulatory protein, C terminal ITG08_11690 PF04851 Type III restriction enzyme, res subunit ITG08_11690 PF00271 Helicase conserved C-terminal domain ITG08_11695 PF00849 RNA pseudouridylate synthase ITG08_11695 PF01479 S4 domain ITG08_11700 PF07690 Major Facilitator Superfamily ITG08_11710 PF11066 Protein of unknown function (DUF2867) ITG08_11710 PF13460 NAD(P)H-binding ITG08_11715 PF01554 MatE ITG08_11720 PF00005 ABC transporter ITG08_11735 PF06965 Na+/H+ antiporter 1 ITG08_11740 PF00691 OmpA family ITG08_11740 PF05736 OprF membrane domain ITG08_11750 PF16295 Tetracyclin repressor-like, C-terminal domain ITG08_11750 PF00440 Bacterial regulatory proteins, tetR family ITG08_11755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ITG08_11755 PF09317 Domain of unknown function (DUF1974) ITG08_11755 PF02770 Acyl-CoA dehydrogenase, middle domain ITG08_11755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ITG08_11760 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ITG08_11760 PF12241 Trans-2-enoyl-CoA reductase catalytic region ITG08_11760 PF07055 Enoyl reductase FAD binding domain ITG08_11765 PF06826 Predicted Permease Membrane Region ITG08_11765 PF02080 TrkA-C domain ITG08_11770 PF00462 Glutaredoxin ITG08_11775 PF00465 Iron-containing alcohol dehydrogenase ITG08_11780 PF01418 Helix-turn-helix domain, rpiR family ITG08_11780 PF01380 SIS domain ITG08_11785 PF00282 Pyridoxal-dependent decarboxylase conserved domain ITG08_11795 PF03956 Lysine exporter LysO ITG08_11805 PF04993 TfoX N-terminal domain ITG08_11805 PF04994 TfoX C-terminal domain ITG08_11815 PF02954 Bacterial regulatory protein, Fis family ITG08_11815 PF00072 Response regulator receiver domain ITG08_11815 PF00158 Sigma-54 interaction domain ITG08_11820 PF00512 His Kinase A (phospho-acceptor) domain ITG08_11820 PF00989 PAS fold ITG08_11820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_11830 PF00266 Aminotransferase class-V ITG08_11840 PF03475 3-alpha domain ITG08_11840 PF03473 MOSC domain ITG08_11870 PF00155 Aminotransferase class I and II ITG08_11875 PF00672 HAMP domain ITG08_11875 PF01966 HD domain ITG08_11885 PF00155 Aminotransferase class I and II ITG08_11885 PF00392 Bacterial regulatory proteins, gntR family ITG08_11895 PF00152 tRNA synthetases class II (D, K and N) ITG08_11895 PF01336 OB-fold nucleic acid binding domain ITG08_11900 PF01740 STAS domain ITG08_11900 PF00916 Sulfate permease family ITG08_11905 PF00672 HAMP domain ITG08_11905 PF17200 Single Cache domain 2 ITG08_11905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_11910 PF01242 6-pyruvoyl tetrahydropterin synthase ITG08_11920 PF03222 Tryptophan/tyrosine permease family ITG08_11925 PF03315 Serine dehydratase beta chain ITG08_11925 PF03313 Serine dehydratase alpha chain ITG08_11930 PF03222 Tryptophan/tyrosine permease family ITG08_11935 PF00293 NUDIX domain ITG08_11945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_11945 PF00512 His Kinase A (phospho-acceptor) domain ITG08_11945 PF09308 LuxQ, periplasmic ITG08_11945 PF00072 Response regulator receiver domain ITG08_11950 PF04715 Anthranilate synthase component I, N terminal region ITG08_11950 PF00425 chorismate binding enzyme ITG08_11965 PF04317 YcjX-like family, DUF463 ITG08_11970 PF05128 Domain of unknown function (DUF697) ITG08_11975 PF18024 Helix-turn-helix domain ITG08_11975 PF00158 Sigma-54 interaction domain ITG08_11980 PF13302 Acetyltransferase (GNAT) domain ITG08_11995 PF00012 Hsp70 protein ITG08_12000 PF00012 Hsp70 protein ITG08_12010 PF00990 Diguanylate cyclase, GGDEF domain ITG08_12030 PF00486 Transcriptional regulatory protein, C terminal ITG08_12060 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ITG08_12060 PF00270 DEAD/DEAH box helicase ITG08_12060 PF11898 Domain of unknown function (DUF3418) ITG08_12060 PF04408 Helicase associated domain (HA2) ITG08_12060 PF00271 Helicase conserved C-terminal domain ITG08_12100 PF00990 Diguanylate cyclase, GGDEF domain ITG08_12100 PF00072 Response regulator receiver domain ITG08_12105 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ITG08_12105 PF01409 tRNA synthetases class II core domain (F) ITG08_12110 PF01588 Putative tRNA binding domain ITG08_12110 PF03484 tRNA synthetase B5 domain ITG08_12110 PF03147 Ferredoxin-fold anticodon binding domain ITG08_12110 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ITG08_12110 PF03483 B3/4 domain ITG08_12160 PF08281 Sigma-70, region 4 ITG08_12160 PF04542 Sigma-70 region 2 ITG08_12170 PF01734 Patatin-like phospholipase ITG08_12180 PF03180 NLPA lipoprotein ITG08_12185 PF03824 High-affinity nickel-transport protein ITG08_12190 PF06226 Protein of unknown function (DUF1007) ITG08_12205 PF02001 Protein of unknown function DUF134 ITG08_12225 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG08_12225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ITG08_12240 PF00216 Bacterial DNA-binding protein ITG08_12250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ITG08_12250 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG08_12270 PF17200 Single Cache domain 2 ITG08_12270 PF00672 HAMP domain ITG08_12270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_12280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_12280 PF03466 LysR substrate binding domain ITG08_12295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_12295 PF00072 Response regulator receiver domain ITG08_12300 PF00155 Aminotransferase class I and II ITG08_12305 PF00155 Aminotransferase class I and II ITG08_12305 PF00392 Bacterial regulatory proteins, gntR family ITG08_12315 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ITG08_12320 PF07683 Cobalamin synthesis protein cobW C-terminal domain ITG08_12320 PF02492 CobW/HypB/UreG, nucleotide-binding domain ITG08_12325 PF00132 Bacterial transferase hexapeptide (six repeats) ITG08_12330 PF01979 Amidohydrolase family ITG08_12340 PF00216 Bacterial DNA-binding protein ITG08_12350 PF05724 Thiopurine S-methyltransferase (TPMT) ITG08_12355 PF02222 ATP-grasp domain ITG08_12360 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region ITG08_12360 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ITG08_12365 PF04172 LrgB-like family ITG08_12370 PF03788 LrgA family ITG08_12375 PF00929 Exonuclease ITG08_12375 PF08411 Exonuclease C-terminal ITG08_12400 PF04116 Fatty acid hydroxylase superfamily ITG08_12420 PF03372 Endonuclease/Exonuclease/phosphatase family ITG08_12425 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ITG08_12435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_12435 PF03466 LysR substrate binding domain ITG08_12440 PF00248 Aldo/keto reductase family ITG08_12445 PF03928 Haem-degrading ITG08_12450 PF00375 Sodium:dicarboxylate symporter family ITG08_12455 PF13460 NAD(P)H-binding ITG08_12460 PF01613 Flavin reductase like domain ITG08_12465 PF02277 Phosphoribosyltransferase ITG08_12470 PF02654 Cobalamin-5-phosphate synthase ITG08_12475 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ITG08_12490 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ITG08_12495 PF01032 FecCD transport family ITG08_12500 PF00005 ABC transporter ITG08_12530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_12530 PF03466 LysR substrate binding domain ITG08_12550 PF00583 Acetyltransferase (GNAT) family ITG08_12560 PF00990 Diguanylate cyclase, GGDEF domain ITG08_12570 PF07690 Major Facilitator Superfamily ITG08_12580 PF03466 LysR substrate binding domain ITG08_12580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_12590 PF01863 Protein of unknown function DUF45 ITG08_12595 PF05971 RNA methyltransferase ITG08_12605 PF04204 Homoserine O-succinyltransferase ITG08_12620 PF01546 Peptidase family M20/M25/M40 ITG08_12620 PF07687 Peptidase dimerisation domain ITG08_12625 PF00990 Diguanylate cyclase, GGDEF domain ITG08_12625 PF05230 MASE2 domain ITG08_12685 PF00069 Protein kinase domain ITG08_12685 PF03793 PASTA domain ITG08_12690 PF13286 Phosphohydrolase-associated domain ITG08_12690 PF01966 HD domain ITG08_12695 PF12102 Domain of unknown function (DUF3578) ITG08_12695 PF07728 AAA domain (dynein-related subfamily) ITG08_12710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_12710 PF03466 LysR substrate binding domain ITG08_12730 PF00263 Bacterial type II and III secretion system protein ITG08_12730 PF04972 BON domain ITG08_12730 PF13629 Pilus formation protein N terminal region ITG08_12740 PF10609 NUBPL iron-transfer P-loop NTPase ITG08_12745 PF00437 Type II/IV secretion system protein ITG08_12780 PF04972 BON domain ITG08_12780 PF00691 OmpA family ITG08_12785 PF08448 PAS fold ITG08_12785 PF00990 Diguanylate cyclase, GGDEF domain ITG08_12785 PF00563 EAL domain ITG08_12790 PF00709 Adenylosuccinate synthetase ITG08_12795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_12795 PF03466 LysR substrate binding domain ITG08_12810 PF12729 Four helix bundle sensory module for signal transduction ITG08_12810 PF00672 HAMP domain ITG08_12810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_12820 PF13419 Haloacid dehalogenase-like hydrolase ITG08_12825 PF01238 Phosphomannose isomerase type I ITG08_12830 PF01232 Mannitol dehydrogenase Rossmann domain ITG08_12830 PF08125 Mannitol dehydrogenase C-terminal domain ITG08_12835 PF00474 Sodium:solute symporter family ITG08_12840 PF03786 D-mannonate dehydratase (UxuA) ITG08_12845 PF12464 Maltose acetyltransferase ITG08_12845 PF00132 Bacterial transferase hexapeptide (six repeats) ITG08_12855 PF07729 FCD domain ITG08_12855 PF00392 Bacterial regulatory proteins, gntR family ITG08_12870 PF00704 Glycosyl hydrolases family 18 ITG08_12875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_12875 PF03466 LysR substrate binding domain ITG08_12880 PF07715 TonB-dependent Receptor Plug Domain ITG08_12880 PF00593 TonB dependent receptor ITG08_12885 PF13649 Methyltransferase domain ITG08_12890 PF00583 Acetyltransferase (GNAT) family ITG08_12895 PF01810 LysE type translocator ITG08_12905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ITG08_12910 PF12320 Type 5 capsule protein repressor C-terminal domain ITG08_12910 PF00149 Calcineurin-like phosphoesterase ITG08_12915 PF13476 AAA domain ITG08_12935 PF04244 Deoxyribodipyrimidine photo-lyase-related protein ITG08_12940 PF00875 DNA photolyase ITG08_12940 PF03441 FAD binding domain of DNA photolyase ITG08_12945 PF00582 Universal stress protein family ITG08_12960 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ITG08_12960 PF01648 4'-phosphopantetheinyl transferase superfamily ITG08_12965 PF00005 ABC transporter ITG08_12970 PF01497 Periplasmic binding protein ITG08_12975 PF01032 FecCD transport family ITG08_12980 PF00005 ABC transporter ITG08_12985 PF03621 MbtH-like protein ITG08_12990 PF00501 AMP-binding enzyme ITG08_12990 PF13193 AMP-binding enzyme C-terminal domain ITG08_12990 PF00668 Condensation domain ITG08_12990 PF00550 Phosphopantetheine attachment site ITG08_12995 PF13193 AMP-binding enzyme C-terminal domain ITG08_12995 PF00550 Phosphopantetheine attachment site ITG08_12995 PF00668 Condensation domain ITG08_12995 PF00501 AMP-binding enzyme ITG08_13000 PF07715 TonB-dependent Receptor Plug Domain ITG08_13000 PF00593 TonB dependent receptor ITG08_13010 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ITG08_13030 PF07690 Major Facilitator Superfamily ITG08_13035 PF03009 Glycerophosphoryl diester phosphodiesterase family ITG08_13055 PF00293 NUDIX domain ITG08_13070 PF00849 RNA pseudouridylate synthase ITG08_13070 PF01479 S4 domain ITG08_13115 PF07517 SecA DEAD-like domain ITG08_13115 PF01043 SecA preprotein cross-linking domain ITG08_13115 PF07516 SecA Wing and Scaffold domain ITG08_13115 PF02810 SEC-C motif ITG08_13130 PF00132 Bacterial transferase hexapeptide (six repeats) ITG08_13155 PF12392 Collagenase ITG08_13155 PF01136 Peptidase family U32 ITG08_13165 PF00664 ABC transporter transmembrane region ITG08_13165 PF00005 ABC transporter ITG08_13170 PF00005 ABC transporter ITG08_13175 PF00497 Bacterial extracellular solute-binding proteins, family 3 ITG08_13180 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_13185 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_13195 PF01548 Transposase ITG08_13195 PF02371 Transposase IS116/IS110/IS902 family ITG08_13320 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ITG08_13340 PF00267 Gram-negative porin ITG08_13350 PF03466 LysR substrate binding domain ITG08_13350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_13355 PF13533 Biotin-lipoyl like ITG08_13360 PF00873 AcrB/AcrD/AcrF family ITG08_13365 PF03466 LysR substrate binding domain ITG08_13365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_13370 PF02321 Outer membrane efflux protein ITG08_13375 PF00873 AcrB/AcrD/AcrF family ITG08_13385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_13385 PF03466 LysR substrate binding domain ITG08_13415 PF02954 Bacterial regulatory protein, Fis family ITG08_13415 PF00072 Response regulator receiver domain ITG08_13415 PF00158 Sigma-54 interaction domain ITG08_13425 PF00005 ABC transporter ITG08_13425 PF00571 CBS domain ITG08_13430 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_13440 PF14743 DNA ligase OB-like domain ITG08_13440 PF01068 ATP dependent DNA ligase domain ITG08_13445 PF01554 MatE ITG08_13450 PF00677 Lumazine binding domain ITG08_13460 PF03881 Fructosamine kinase ITG08_13470 PF00877 NlpC/P60 family ITG08_13475 PF12729 Four helix bundle sensory module for signal transduction ITG08_13475 PF00672 HAMP domain ITG08_13475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_13485 PF03942 DTW domain ITG08_13490 PF00480 ROK family ITG08_13500 PF03453 MoeA N-terminal region (domain I and II) ITG08_13500 PF03454 MoeA C-terminal region (domain IV) ITG08_13500 PF00994 Probable molybdopterin binding domain ITG08_13505 PF12804 MobA-like NTP transferase domain ITG08_13510 PF08402 TOBE domain ITG08_13510 PF00005 ABC transporter ITG08_13515 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_13520 PF12849 PBP superfamily domain ITG08_13525 PF00072 Response regulator receiver domain ITG08_13525 PF00158 Sigma-54 interaction domain ITG08_13525 PF02954 Bacterial regulatory protein, Fis family ITG08_13530 PF00512 His Kinase A (phospho-acceptor) domain ITG08_13530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_13535 PF17200 Single Cache domain 2 ITG08_13535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_13535 PF00672 HAMP domain ITG08_13550 PF00005 ABC transporter ITG08_13550 PF12848 ABC transporter ITG08_13555 PF02634 FdhD/NarQ family ITG08_13575 PF02613 Nitrate reductase delta subunit ITG08_13585 PF01568 Molydopterin dinucleotide binding domain ITG08_13585 PF00384 Molybdopterin oxidoreductase ITG08_13585 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ITG08_13590 PF13247 4Fe-4S dicluster domain ITG08_13605 PF00909 Ammonium Transporter Family ITG08_13610 PF02146 Sir2 family ITG08_13615 PF13416 Bacterial extracellular solute-binding protein ITG08_13620 PF13416 Bacterial extracellular solute-binding protein ITG08_13625 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_13630 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_13635 PF00005 ABC transporter ITG08_13635 PF08402 TOBE domain ITG08_13655 PF01171 PP-loop family ITG08_13660 PF00582 Universal stress protein family ITG08_13665 PF00027 Cyclic nucleotide-binding domain ITG08_13665 PF13545 Crp-like helix-turn-helix domain ITG08_13680 PF00403 Heavy-metal-associated domain ITG08_13690 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP ITG08_13690 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ITG08_13705 PF00115 Cytochrome C and Quinol oxidase polypeptide I ITG08_13720 PF00512 His Kinase A (phospho-acceptor) domain ITG08_13720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_13720 PF09308 LuxQ, periplasmic ITG08_13720 PF00072 Response regulator receiver domain ITG08_13735 PF05840 Bacteriophage replication gene A protein (GPA) ITG08_13765 PF07660 Secretin and TonB N terminus short domain ITG08_13765 PF03958 Bacterial type II/III secretion system short domain ITG08_13765 PF00263 Bacterial type II and III secretion system protein ITG08_13765 PF11741 AMIN domain ITG08_13820 PF17414 MatP C-terminal ribbon-helix-helix domain ITG08_13820 PF06303 MatP N-terminal domain ITG08_13825 PF05362 Lon protease (S16) C-terminal proteolytic domain ITG08_13825 PF13654 AAA domain ITG08_13830 PF07977 FabA-like domain ITG08_13835 PF04957 Ribosome modulation factor ITG08_13845 PF00005 ABC transporter ITG08_13845 PF16326 ABC transporter C-terminal domain ITG08_13845 PF12848 ABC transporter ITG08_13855 PF10672 S-adenosylmethionine-dependent methyltransferase ITG08_13855 PF02926 THUMP domain ITG08_13855 PF01170 Putative RNA methylase family UPF0020 ITG08_13860 PF07126 Cell-division protein ZapC ITG08_13865 PF01180 Dihydroorotate dehydrogenase ITG08_13870 PF05088 Bacterial NAD-glutamate dehydrogenase ITG08_13880 PF11940 Domain of unknown function (DUF3458) Ig-like fold ITG08_13880 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ITG08_13880 PF01433 Peptidase family M1 domain ITG08_13890 PF17804 Tail specific protease N-terminal domain ITG08_13890 PF03572 Peptidase family S41 ITG08_13890 PF11818 C-terminal domain of tail specific protease (DUF3340) ITG08_13890 PF00595 PDZ domain ITG08_13895 PF04352 ProQ/FINO family ITG08_13895 PF17516 ProQ C-terminal domain ITG08_13900 PF13185 GAF domain ITG08_13905 PF00664 ABC transporter transmembrane region ITG08_13905 PF00005 ABC transporter ITG08_13910 PF04403 Paraquat-inducible protein A ITG08_13915 PF02470 MlaD protein ITG08_13920 PF01189 16S rRNA methyltransferase RsmB/F ITG08_13920 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF ITG08_13920 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF ITG08_13925 PF17783 CvfB-like winged helix domain ITG08_13925 PF13509 S1 domain ITG08_13940 PF00391 PEP-utilising enzyme, mobile domain ITG08_13940 PF02896 PEP-utilising enzyme, TIM barrel domain ITG08_13940 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ITG08_13945 PF00793 DAHP synthetase I family ITG08_13950 PF04461 Protein of unknown function (DUF520) ITG08_13955 PF10414 Sirohaem synthase dimerisation region ITG08_13955 PF14824 Sirohaem biosynthesis protein central ITG08_13955 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ITG08_13960 PF00497 Bacterial extracellular solute-binding proteins, family 3 ITG08_13965 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_13970 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_13975 PF00005 ABC transporter ITG08_13980 PF01027 Inhibitor of apoptosis-promoting Bax1 ITG08_13985 PF04358 DsrC like protein ITG08_13990 PF00708 Acylphosphatase ITG08_13995 PF00672 HAMP domain ITG08_13995 PF17200 Single Cache domain 2 ITG08_13995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_14000 PF10672 S-adenosylmethionine-dependent methyltransferase ITG08_14000 PF17785 PUA-like domain ITG08_14015 PF00691 OmpA family ITG08_14015 PF05736 OprF membrane domain ITG08_14025 PF17151 Periplasmic sensor domain ITG08_14025 PF00990 Diguanylate cyclase, GGDEF domain ITG08_14030 PF06508 Queuosine biosynthesis protein QueC ITG08_14035 PF04055 Radical SAM superfamily ITG08_14065 PF13193 AMP-binding enzyme C-terminal domain ITG08_14065 PF16177 Acetyl-coenzyme A synthetase N-terminus ITG08_14065 PF00501 AMP-binding enzyme ITG08_14070 PF04303 PrpF protein ITG08_14075 PF00694 Aconitase C-terminal domain ITG08_14075 PF00330 Aconitase family (aconitate hydratase) ITG08_14080 PF00285 Citrate synthase, C-terminal domain ITG08_14105 PF01970 Tripartite tricarboxylate transporter TctA family ITG08_14110 PF01738 Dienelactone hydrolase family ITG08_14125 PF09905 DNA-binding protein VF530 ITG08_14135 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ITG08_14135 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ITG08_14140 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ITG08_14145 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ITG08_14145 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ITG08_14150 PF12431 Transcriptional regulator ITG08_14150 PF00072 Response regulator receiver domain ITG08_14155 PF00989 PAS fold ITG08_14155 PF17203 Single cache domain 3 ITG08_14155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_14155 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ITG08_14170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG08_14185 PF01235 Sodium:alanine symporter family ITG08_14205 PF01235 Sodium:alanine symporter family ITG08_14210 PF01810 LysE type translocator ITG08_14215 PF02074 Carboxypeptidase Taq (M32) metallopeptidase ITG08_14225 PF01925 Sulfite exporter TauE/SafE ITG08_14235 PF01717 Cobalamin-independent synthase, Catalytic domain ITG08_14235 PF08267 Cobalamin-independent synthase, N-terminal domain ITG08_14245 PF01928 CYTH domain ITG08_14265 PF02954 Bacterial regulatory protein, Fis family ITG08_14265 PF00072 Response regulator receiver domain ITG08_14265 PF00158 Sigma-54 interaction domain ITG08_14270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_14270 PF00497 Bacterial extracellular solute-binding proteins, family 3 ITG08_14270 PF00512 His Kinase A (phospho-acceptor) domain ITG08_14275 PF00939 Sodium:sulfate symporter transmembrane region ITG08_14290 PF03413 Peptidase propeptide and YPEB domain ITG08_14290 PF01447 Thermolysin metallopeptidase, catalytic domain ITG08_14290 PF02868 Thermolysin metallopeptidase, alpha-helical domain ITG08_14290 PF04151 Bacterial pre-peptidase C-terminal domain ITG08_14290 PF07504 Fungalysin/Thermolysin Propeptide Motif ITG08_14310 PF03466 LysR substrate binding domain ITG08_14310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_14315 PF01212 Beta-eliminating lyase ITG08_14330 PF01641 SelR domain ITG08_14330 PF01625 Peptide methionine sulfoxide reductase ITG08_14340 PF00474 Sodium:solute symporter family ITG08_14350 PF12729 Four helix bundle sensory module for signal transduction ITG08_14350 PF00672 HAMP domain ITG08_14350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_14360 PF00929 Exonuclease ITG08_14360 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ITG08_14360 PF14579 Helix-hairpin-helix motif ITG08_14360 PF11490 DNA polymerase III polC-type N-terminus II ITG08_14360 PF07733 Bacterial DNA polymerase III alpha NTPase domain ITG08_14360 PF02811 PHP domain ITG08_14365 PF00571 CBS domain ITG08_14370 PF07729 FCD domain ITG08_14370 PF00392 Bacterial regulatory proteins, gntR family ITG08_14380 PF00392 Bacterial regulatory proteins, gntR family ITG08_14380 PF07729 FCD domain ITG08_14390 PF08787 Alginate lyase ITG08_14405 PF08787 Alginate lyase ITG08_14410 PF08787 Alginate lyase ITG08_14415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_14415 PF00672 HAMP domain ITG08_14420 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ITG08_14420 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ITG08_14430 PF00474 Sodium:solute symporter family ITG08_14440 PF03401 Tripartite tricarboxylate transporter family receptor ITG08_14450 PF01970 Tripartite tricarboxylate transporter TctA family ITG08_14455 PF07729 FCD domain ITG08_14455 PF00392 Bacterial regulatory proteins, gntR family ITG08_14465 PF00005 ABC transporter ITG08_14470 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_14475 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_14480 PF01557 Fumarylacetoacetate (FAA) hydrolase family ITG08_14485 PF07940 Heparinase II/III-like protein ITG08_14485 PF05426 Alginate lyase ITG08_14490 PF07940 Heparinase II/III-like protein ITG08_14490 PF05426 Alginate lyase ITG08_14495 PF07883 Cupin domain ITG08_14500 PF00294 pfkB family carbohydrate kinase ITG08_14505 PF01081 KDPG and KHG aldolase ITG08_14510 PF00474 Sodium:solute symporter family ITG08_14515 PF01464 Transglycosylase SLT domain ITG08_14515 PF00497 Bacterial extracellular solute-binding proteins, family 3 ITG08_14525 PF00491 Arginase family ITG08_14530 PF17944 Arginine decarboxylase C-terminal helical extension ITG08_14530 PF17810 Arginine decarboxylase helical bundle domain ITG08_14530 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ITG08_14535 PF00171 Aldehyde dehydrogenase family ITG08_14540 PF17932 Tetracyclin repressor-like, C-terminal domain ITG08_14540 PF00440 Bacterial regulatory proteins, tetR family ITG08_14545 PF16326 ABC transporter C-terminal domain ITG08_14545 PF12848 ABC transporter ITG08_14545 PF00005 ABC transporter ITG08_14560 PF04266 ASCH domain ITG08_14565 PF00453 Ribosomal protein L20 ITG08_14570 PF01632 Ribosomal protein L35 ITG08_14575 PF05198 Translation initiation factor IF-3, N-terminal domain ITG08_14575 PF00707 Translation initiation factor IF-3, C-terminal domain ITG08_14580 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ITG08_14580 PF02824 TGS domain ITG08_14580 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ITG08_14580 PF03129 Anticodon binding domain ITG08_14590 PF07070 SpoOM protein ITG08_14595 PF00392 Bacterial regulatory proteins, gntR family ITG08_14595 PF07702 UTRA domain ITG08_14600 PF01979 Amidohydrolase family ITG08_14605 PF00491 Arginase family ITG08_14610 PF01175 Urocanase Rossmann-like domain ITG08_14610 PF17392 Urocanase C-terminal domain ITG08_14610 PF17391 Urocanase N-terminal domain ITG08_14615 PF00221 Aromatic amino acid lyase ITG08_14625 PF00089 Trypsin ITG08_14635 PF02913 FAD linked oxidases, C-terminal domain ITG08_14635 PF01565 FAD binding domain ITG08_14635 PF13183 4Fe-4S dicluster domain ITG08_14650 PF00691 OmpA family ITG08_14670 PF01259 SAICAR synthetase ITG08_14680 PF04408 Helicase associated domain (HA2) ITG08_14680 PF00270 DEAD/DEAH box helicase ITG08_14680 PF00271 Helicase conserved C-terminal domain ITG08_14680 PF08482 ATP-dependent helicase C-terminal ITG08_14685 PF00390 Malic enzyme, N-terminal domain ITG08_14685 PF03949 Malic enzyme, NAD binding domain ITG08_14690 PF02698 DUF218 domain ITG08_14695 PF00939 Sodium:sulfate symporter transmembrane region ITG08_14700 PF00990 Diguanylate cyclase, GGDEF domain ITG08_14700 PF00072 Response regulator receiver domain ITG08_14710 PF00990 Diguanylate cyclase, GGDEF domain ITG08_14715 PF03466 LysR substrate binding domain ITG08_14715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_14725 PF00266 Aminotransferase class-V ITG08_14735 PF00990 Diguanylate cyclase, GGDEF domain ITG08_14735 PF07694 5TMR of 5TMR-LYT ITG08_14740 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG08_14745 PF00005 ABC transporter ITG08_14745 PF00664 ABC transporter transmembrane region ITG08_14750 PF00005 ABC transporter ITG08_14750 PF00664 ABC transporter transmembrane region ITG08_14755 PF02743 Cache domain ITG08_14755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_14755 PF00672 HAMP domain ITG08_14760 PF02028 BCCT, betaine/carnitine/choline family transporter ITG08_14765 PF02028 BCCT, betaine/carnitine/choline family transporter ITG08_14770 PF00072 Response regulator receiver domain ITG08_14770 PF00196 Bacterial regulatory proteins, luxR family ITG08_14775 PF07730 Histidine kinase ITG08_14775 PF17200 Single Cache domain 2 ITG08_14780 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ITG08_14790 PF03480 Bacterial extracellular solute-binding protein, family 7 ITG08_14805 PF00753 Metallo-beta-lactamase superfamily ITG08_14810 PF05951 Bacterial protein of unknown function (DUF882) ITG08_14815 PF03734 L,D-transpeptidase catalytic domain ITG08_14815 PF01471 Putative peptidoglycan binding domain ITG08_14840 PF00925 GTP cyclohydrolase II ITG08_14850 PF03918 Cytochrome C biogenesis protein ITG08_14855 PF08534 Redoxin ITG08_14860 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ITG08_14860 PF01578 Cytochrome C assembly protein ITG08_14865 PF03916 Polysulphide reductase, NrfD ITG08_14870 PF13247 4Fe-4S dicluster domain ITG08_14880 PF02335 Cytochrome c552 ITG08_14885 PF00581 Rhodanese-like domain ITG08_14895 PF00521 DNA gyrase/topoisomerase IV, subunit A ITG08_14895 PF03989 DNA gyrase C-terminal domain, beta-propeller ITG08_14905 PF03477 ATP cone domain ITG08_14905 PF02867 Ribonucleotide reductase, barrel domain ITG08_14905 PF00317 Ribonucleotide reductase, all-alpha domain ITG08_14910 PF00268 Ribonucleotide reductase, small chain ITG08_14915 PF00970 Oxidoreductase FAD-binding domain ITG08_14915 PF00111 2Fe-2S iron-sulfur cluster binding domain ITG08_14915 PF00175 Oxidoreductase NAD-binding domain ITG08_14925 PF02613 Nitrate reductase delta subunit ITG08_14930 PF01568 Molydopterin dinucleotide binding domain ITG08_14930 PF00384 Molybdopterin oxidoreductase ITG08_14930 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ITG08_14935 PF12800 4Fe-4S binding domain ITG08_14935 PF13247 4Fe-4S dicluster domain ITG08_14940 PF04976 DMSO reductase anchor subunit (DmsC) ITG08_14945 PF00994 Probable molybdopterin binding domain ITG08_14960 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ITG08_14965 PF16653 Saccharopine dehydrogenase C-terminal domain ITG08_14965 PF03435 Saccharopine dehydrogenase NADP binding domain ITG08_14970 PF00202 Aminotransferase class-III ITG08_14995 PF01066 CDP-alcohol phosphatidyltransferase ITG08_15000 PF08459 UvrC Helix-hairpin-helix N-terminal ITG08_15000 PF02151 UvrB/uvrC motif ITG08_15000 PF01541 GIY-YIG catalytic domain ITG08_15005 PF00196 Bacterial regulatory proteins, luxR family ITG08_15005 PF00072 Response regulator receiver domain ITG08_15010 PF00136 DNA polymerase family B ITG08_15010 PF03104 DNA polymerase family B, exonuclease domain ITG08_15020 PF01132 Elongation factor P (EF-P) OB domain ITG08_15020 PF08207 Elongation factor P (EF-P) KOW-like domain ITG08_15020 PF09285 Elongation factor P, C-terminal ITG08_15025 PF04269 Protein of unknown function, DUF440 ITG08_15035 PF01479 S4 domain ITG08_15035 PF00849 RNA pseudouridylate synthase ITG08_15040 PF01300 Telomere recombination ITG08_15045 PF02811 PHP domain ITG08_15050 PF08056 Tryptophan operon leader peptide ITG08_15055 PF04715 Anthranilate synthase component I, N terminal region ITG08_15055 PF00425 chorismate binding enzyme ITG08_15060 PF00117 Glutamine amidotransferase class-I ITG08_15065 PF02885 Glycosyl transferase family, helical bundle domain ITG08_15065 PF00591 Glycosyl transferase family, a/b domain ITG08_15070 PF00218 Indole-3-glycerol phosphate synthase ITG08_15070 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ITG08_15075 PF00291 Pyridoxal-phosphate dependent enzyme ITG08_15080 PF00290 Tryptophan synthase alpha chain ITG08_15085 PF00375 Sodium:dicarboxylate symporter family ITG08_15090 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ITG08_15095 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ITG08_15100 PF03480 Bacterial extracellular solute-binding protein, family 7 ITG08_15105 PF00497 Bacterial extracellular solute-binding proteins, family 3 ITG08_15110 PF00155 Aminotransferase class I and II ITG08_15115 PF03466 LysR substrate binding domain ITG08_15115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_15125 PF04279 Intracellular septation protein A ITG08_15130 PF03061 Thioesterase superfamily ITG08_15135 PF03795 YCII-related domain ITG08_15145 PF08267 Cobalamin-independent synthase, N-terminal domain ITG08_15145 PF01717 Cobalamin-independent synthase, Catalytic domain ITG08_15150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_15150 PF03466 LysR substrate binding domain ITG08_15165 PF08497 Radical SAM N-terminal ITG08_15165 PF11842 Domain of unknown function (DUF3362) ITG08_15165 PF04055 Radical SAM superfamily ITG08_15170 PF01381 Helix-turn-helix ITG08_15170 PF07883 Cupin domain ITG08_15175 PF03594 Benzoate membrane transport protein ITG08_15185 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ITG08_15190 PF00535 Glycosyl transferase family 2 ITG08_15200 PF01548 Transposase ITG08_15200 PF02371 Transposase IS116/IS110/IS902 family ITG08_15210 PF04013 Putative SAM-dependent RNA methyltransferase ITG08_15225 PF08281 Sigma-70, region 4 ITG08_15225 PF04542 Sigma-70 region 2 ITG08_15230 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ITG08_15255 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ITG08_15265 PF03466 LysR substrate binding domain ITG08_15265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_15270 PF13460 NAD(P)H-binding ITG08_15285 PF01638 HxlR-like helix-turn-helix ITG08_15290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_15290 PF03466 LysR substrate binding domain ITG08_15295 PF00106 short chain dehydrogenase ITG08_15305 PF03922 OmpW family ITG08_15310 PF00483 Nucleotidyl transferase ITG08_15325 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_15330 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_15335 PF00005 ABC transporter ITG08_15350 PF00158 Sigma-54 interaction domain ITG08_15350 PF00072 Response regulator receiver domain ITG08_15350 PF02954 Bacterial regulatory protein, Fis family ITG08_15355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_15355 PF02743 Cache domain ITG08_15355 PF00512 His Kinase A (phospho-acceptor) domain ITG08_15360 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ITG08_15360 PF13378 Enolase C-terminal domain-like ITG08_15370 PF03466 LysR substrate binding domain ITG08_15370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_15385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_15385 PF17200 Single Cache domain 2 ITG08_15385 PF00672 HAMP domain ITG08_15390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_15390 PF03466 LysR substrate binding domain ITG08_15400 PF00672 HAMP domain ITG08_15400 PF12729 Four helix bundle sensory module for signal transduction ITG08_15400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_15415 PF00155 Aminotransferase class I and II ITG08_15415 PF00392 Bacterial regulatory proteins, gntR family ITG08_15425 PF03466 LysR substrate binding domain ITG08_15425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_15430 PF07690 Major Facilitator Superfamily ITG08_15435 PF03222 Tryptophan/tyrosine permease family ITG08_15445 PF00171 Aldehyde dehydrogenase family ITG08_15455 PF12729 Four helix bundle sensory module for signal transduction ITG08_15455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_15455 PF00672 HAMP domain ITG08_15475 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ITG08_15485 PF00474 Sodium:solute symporter family ITG08_15490 PF12833 Helix-turn-helix domain ITG08_15495 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ITG08_15495 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ITG08_15500 PF01238 Phosphomannose isomerase type I ITG08_15515 PF00563 EAL domain ITG08_15515 PF00990 Diguanylate cyclase, GGDEF domain ITG08_15515 PF03707 Bacterial signalling protein N terminal repeat ITG08_15520 PF00990 Diguanylate cyclase, GGDEF domain ITG08_15525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ITG08_15530 PF00246 Zinc carboxypeptidase ITG08_15545 PF00884 Sulfatase ITG08_15550 PF03466 LysR substrate binding domain ITG08_15550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_15555 PF13186 Iron-sulfur cluster-binding domain ITG08_15555 PF04055 Radical SAM superfamily ITG08_15570 PF00892 EamA-like transporter family ITG08_15575 PF03358 NADPH-dependent FMN reductase ITG08_15585 PF01227 GTP cyclohydrolase I ITG08_15590 PF02152 Dihydroneopterin aldolase ITG08_15595 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ITG08_15605 PF00893 Small Multidrug Resistance protein ITG08_15615 PF00107 Zinc-binding dehydrogenase ITG08_15615 PF08240 Alcohol dehydrogenase GroES-like domain ITG08_15620 PF00756 Putative esterase ITG08_15630 PF13344 Haloacid dehalogenase-like hydrolase ITG08_15630 PF00293 NUDIX domain ITG08_15635 PF00171 Aldehyde dehydrogenase family ITG08_15640 PF01590 GAF domain ITG08_15640 PF02954 Bacterial regulatory protein, Fis family ITG08_15640 PF00158 Sigma-54 interaction domain ITG08_15645 PF00875 DNA photolyase ITG08_15645 PF03441 FAD binding domain of DNA photolyase ITG08_15650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_15650 PF03466 LysR substrate binding domain ITG08_15660 PF00251 Glycosyl hydrolases family 32 N-terminal domain ITG08_15660 PF08244 Glycosyl hydrolases family 32 C terminal ITG08_15665 PF00294 pfkB family carbohydrate kinase ITG08_15670 PF00367 phosphotransferase system, EIIB ITG08_15670 PF02378 Phosphotransferase system, EIIC ITG08_15675 PF00356 Bacterial regulatory proteins, lacI family ITG08_15680 PF11471 Maltoporin periplasmic N-terminal extension ITG08_15680 PF02264 LamB porin ITG08_15710 PF03605 Anaerobic c4-dicarboxylate membrane transporter ITG08_15715 PF13419 Haloacid dehalogenase-like hydrolase ITG08_15720 PF01966 HD domain ITG08_15730 PF00392 Bacterial regulatory proteins, gntR family ITG08_15730 PF07729 FCD domain ITG08_15735 PF03450 CO dehydrogenase flavoprotein C-terminal domain ITG08_15735 PF00941 FAD binding domain in molybdopterin dehydrogenase ITG08_15740 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ITG08_15740 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ITG08_15750 PF01979 Amidohydrolase family ITG08_15760 PF02627 Carboxymuconolactone decarboxylase family ITG08_15765 PF13411 MerR HTH family regulatory protein ITG08_15780 PF04229 GrpB protein ITG08_15800 PF04115 Ureidoglycolate lyase ITG08_15805 PF03561 Allantoicase repeat ITG08_15810 PF09349 OHCU decarboxylase ITG08_15810 PF01014 Uricase ITG08_15820 PF00576 HIUase/Transthyretin family ITG08_15825 PF00860 Permease family ITG08_15830 PF00860 Permease family ITG08_15835 PF01979 Amidohydrolase family ITG08_15850 PF01979 Amidohydrolase family ITG08_15860 PF13660 Domain of unknown function (DUF4147) ITG08_15860 PF05161 MOFRL family ITG08_15865 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ITG08_15865 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ITG08_15870 PF01261 Xylose isomerase-like TIM barrel ITG08_15875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ITG08_15875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ITG08_15875 PF00205 Thiamine pyrophosphate enzyme, central domain ITG08_15880 PF01274 Malate synthase ITG08_15890 PF07681 DoxX ITG08_15895 PF01047 MarR family ITG08_15905 PF03466 LysR substrate binding domain ITG08_15905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_15920 PF00892 EamA-like transporter family ITG08_15940 PF07238 PilZ domain ITG08_15940 PF12945 Flagellar protein YcgR ITG08_15945 PF13654 AAA domain ITG08_15945 PF05362 Lon protease (S16) C-terminal proteolytic domain ITG08_15955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ITG08_15955 PF00005 ABC transporter ITG08_15960 PF00356 Bacterial regulatory proteins, lacI family ITG08_15970 PF01263 Aldose 1-epimerase ITG08_15975 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ITG08_15975 PF06165 Glycosyltransferase family 36 ITG08_15980 PF00005 ABC transporter ITG08_15980 PF17912 MalK OB fold domain ITG08_15980 PF03459 TOBE domain ITG08_15985 PF00232 Glycosyl hydrolase family 1 ITG08_15990 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_15995 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_16005 PF00356 Bacterial regulatory proteins, lacI family ITG08_16010 PF00672 HAMP domain ITG08_16010 PF02743 Cache domain ITG08_16010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_16020 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ITG08_16020 PF00326 Prolyl oligopeptidase family ITG08_16025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_16025 PF03466 LysR substrate binding domain ITG08_16030 PF02652 L-lactate permease ITG08_16035 PF01070 FMN-dependent dehydrogenase ITG08_16050 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_16055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ITG08_16060 PF00005 ABC transporter ITG08_16065 PF00005 ABC transporter ITG08_16065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ITG08_16070 PF01554 MatE ITG08_16075 PF12833 Helix-turn-helix domain ITG08_16075 PF01497 Periplasmic binding protein ITG08_16080 PF00155 Aminotransferase class I and II ITG08_16095 PF17773 UPF0176 acylphosphatase like domain ITG08_16095 PF00581 Rhodanese-like domain ITG08_16110 PF01238 Phosphomannose isomerase type I ITG08_16115 PF07690 Major Facilitator Superfamily ITG08_16120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_16120 PF07730 Histidine kinase ITG08_16120 PF05231 MASE1 ITG08_16125 PF00196 Bacterial regulatory proteins, luxR family ITG08_16125 PF00072 Response regulator receiver domain ITG08_16130 PF07690 Major Facilitator Superfamily ITG08_16145 PF00563 EAL domain ITG08_16145 PF03707 Bacterial signalling protein N terminal repeat ITG08_16145 PF00990 Diguanylate cyclase, GGDEF domain ITG08_16155 PF05726 Pirin C-terminal cupin domain ITG08_16155 PF02678 Pirin ITG08_16160 PF06865 Pyrimidine/purine nucleoside phosphorylase ITG08_16170 PF08329 Chitinase A, N-terminal domain ITG08_16170 PF00704 Glycosyl hydrolases family 18 ITG08_16175 PF12697 Alpha/beta hydrolase family ITG08_16215 PF01124 MAPEG family ITG08_16225 PF03600 Citrate transporter ITG08_16235 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ITG08_16235 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ITG08_16240 PF06029 AlkA N-terminal domain ITG08_16240 PF00730 HhH-GPD superfamily base excision DNA repair protein ITG08_16250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_16250 PF03466 LysR substrate binding domain ITG08_16260 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ITG08_16265 PF05068 Mannitol repressor ITG08_16270 PF08125 Mannitol dehydrogenase C-terminal domain ITG08_16270 PF01232 Mannitol dehydrogenase Rossmann domain ITG08_16275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ITG08_16275 PF02378 Phosphotransferase system, EIIC ITG08_16275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ITG08_16285 PF00881 Nitroreductase family ITG08_16290 PF00258 Flavodoxin ITG08_16290 PF00753 Metallo-beta-lactamase superfamily ITG08_16290 PF00301 Rubredoxin ITG08_16295 PF18113 Rubredoxin binding C-terminal domain ITG08_16295 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG08_16300 PF03616 Sodium/glutamate symporter ITG08_16305 PF10928 Protein of unknown function (DUF2810) ITG08_16315 PF14552 Tautomerase enzyme ITG08_16325 PF04545 Sigma-70, region 4 ITG08_16325 PF04542 Sigma-70 region 2 ITG08_16330 PF12973 ChrR Cupin-like domain ITG08_16340 PF03441 FAD binding domain of DNA photolyase ITG08_16340 PF00875 DNA photolyase ITG08_16350 PF00106 short chain dehydrogenase ITG08_16355 PF01593 Flavin containing amine oxidoreductase ITG08_16390 PF00106 short chain dehydrogenase ITG08_16395 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ITG08_16405 PF00155 Aminotransferase class I and II ITG08_16420 PF03466 LysR substrate binding domain ITG08_16420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_16430 PF07690 Major Facilitator Superfamily ITG08_16450 PF02355 Protein export membrane protein ITG08_16450 PF07549 SecD/SecF GG Motif ITG08_16455 PF13721 SecD export protein N-terminal TM region ITG08_16455 PF07549 SecD/SecF GG Motif ITG08_16455 PF02355 Protein export membrane protein ITG08_16465 PF05193 Peptidase M16 inactive domain ITG08_16465 PF00675 Insulinase (Peptidase family M16) ITG08_16470 PF00072 Response regulator receiver domain ITG08_16470 PF04397 LytTr DNA-binding domain ITG08_16475 PF06580 Histidine kinase ITG08_16475 PF07694 5TMR of 5TMR-LYT ITG08_16490 PF12704 MacB-like periplasmic core domain ITG08_16490 PF02687 FtsX-like permease family ITG08_16495 PF00005 ABC transporter ITG08_16515 PF03466 LysR substrate binding domain ITG08_16515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_16525 PF00144 Beta-lactamase ITG08_16535 PF07687 Peptidase dimerisation domain ITG08_16535 PF01546 Peptidase family M20/M25/M40 ITG08_16540 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ITG08_16540 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ITG08_16555 PF01709 Transcriptional regulator ITG08_16565 PF01329 Pterin 4 alpha carbinolamine dehydratase ITG08_16570 PF00351 Biopterin-dependent aromatic amino acid hydroxylase ITG08_16575 PF13193 AMP-binding enzyme C-terminal domain ITG08_16575 PF00501 AMP-binding enzyme ITG08_16580 PF00175 Oxidoreductase NAD-binding domain ITG08_16580 PF00111 2Fe-2S iron-sulfur cluster binding domain ITG08_16580 PF00970 Oxidoreductase FAD-binding domain ITG08_16585 PF02798 Glutathione S-transferase, N-terminal domain ITG08_16590 PF03466 LysR substrate binding domain ITG08_16590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_16595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_16595 PF03466 LysR substrate binding domain ITG08_16600 PF14765 Polyketide synthase dehydratase ITG08_16600 PF00550 Phosphopantetheine attachment site ITG08_16600 PF08659 KR domain ITG08_16600 PF08240 Alcohol dehydrogenase GroES-like domain ITG08_16600 PF00698 Acyl transferase domain ITG08_16620 PF14497 Glutathione S-transferase, C-terminal domain ITG08_16620 PF02798 Glutathione S-transferase, N-terminal domain ITG08_16630 PF04209 homogentisate 1,2-dioxygenase ITG08_16635 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ITG08_16650 PF00512 His Kinase A (phospho-acceptor) domain ITG08_16650 PF00672 HAMP domain ITG08_16650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_16655 PF00072 Response regulator receiver domain ITG08_16655 PF00486 Transcriptional regulatory protein, C terminal ITG08_16665 PF08402 TOBE domain ITG08_16665 PF00005 ABC transporter ITG08_16690 PF07702 UTRA domain ITG08_16690 PF00392 Bacterial regulatory proteins, gntR family ITG08_16695 PF00005 ABC transporter ITG08_16700 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_16705 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_16715 PF00392 Bacterial regulatory proteins, gntR family ITG08_16720 PF00202 Aminotransferase class-III ITG08_16730 PF00106 short chain dehydrogenase ITG08_16735 PF00072 Response regulator receiver domain ITG08_16735 PF00672 HAMP domain ITG08_16735 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ITG08_16735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_16735 PF00512 His Kinase A (phospho-acceptor) domain ITG08_16735 PF01627 Hpt domain ITG08_16745 PF08719 Domain of unknown function (DUF1768) ITG08_16745 PF00925 GTP cyclohydrolase II ITG08_16765 PF13614 AAA domain ITG08_16765 PF18607 ParA helix turn helix domain ITG08_16770 PF08775 ParB family ITG08_16770 PF02195 ParB-like nuclease domain ITG08_16775 PF05127 Helicase ITG08_16775 PF13718 GNAT acetyltransferase 2 ITG08_16785 PF00664 ABC transporter transmembrane region ITG08_16785 PF00005 ABC transporter ITG08_16785 PF03412 Peptidase C39 family ITG08_16800 PF00529 HlyD membrane-fusion protein of T1SS ITG08_16805 PF02954 Bacterial regulatory protein, Fis family ITG08_16805 PF00158 Sigma-54 interaction domain ITG08_16805 PF00072 Response regulator receiver domain ITG08_16810 PF02743 Cache domain ITG08_16810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_16810 PF00512 His Kinase A (phospho-acceptor) domain ITG08_16815 PF01243 Pyridoxamine 5'-phosphate oxidase ITG08_16815 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ITG08_16820 PF00072 Response regulator receiver domain ITG08_16820 PF00196 Bacterial regulatory proteins, luxR family ITG08_16835 PF12833 Helix-turn-helix domain ITG08_16840 PF00171 Aldehyde dehydrogenase family ITG08_16840 PF14850 DNA-binding domain of Proline dehydrogenase ITG08_16840 PF01619 Proline dehydrogenase ITG08_16840 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ITG08_16850 PF00474 Sodium:solute symporter family ITG08_16865 PF01037 Lrp/AsnC ligand binding domain ITG08_16870 PF04286 Protein of unknown function (DUF445) ITG08_16875 PF00005 ABC transporter ITG08_16875 PF00664 ABC transporter transmembrane region ITG08_16895 PF01544 CorA-like Mg2+ transporter protein ITG08_16900 PF08019 Phosphoethanolamine transferase EptA/EptB ITG08_16900 PF00884 Sulfatase ITG08_16930 PF00512 His Kinase A (phospho-acceptor) domain ITG08_16930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_16930 PF02743 Cache domain ITG08_16935 PF00158 Sigma-54 interaction domain ITG08_16935 PF02954 Bacterial regulatory protein, Fis family ITG08_16935 PF00072 Response regulator receiver domain ITG08_16950 PF01266 FAD dependent oxidoreductase ITG08_16955 PF04389 Peptidase family M28 ITG08_16955 PF04151 Bacterial pre-peptidase C-terminal domain ITG08_16960 PF04151 Bacterial pre-peptidase C-terminal domain ITG08_16960 PF02868 Thermolysin metallopeptidase, alpha-helical domain ITG08_16960 PF01447 Thermolysin metallopeptidase, catalytic domain ITG08_16960 PF03413 Peptidase propeptide and YPEB domain ITG08_16960 PF07504 Fungalysin/Thermolysin Propeptide Motif ITG08_16970 PF00672 HAMP domain ITG08_16970 PF00512 His Kinase A (phospho-acceptor) domain ITG08_16970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_16975 PF00486 Transcriptional regulatory protein, C terminal ITG08_16975 PF00072 Response regulator receiver domain ITG08_16985 PF13977 BetI-type transcriptional repressor, C-terminal ITG08_16985 PF00440 Bacterial regulatory proteins, tetR family ITG08_16990 PF00171 Aldehyde dehydrogenase family ITG08_16995 PF00732 GMC oxidoreductase ITG08_16995 PF05199 GMC oxidoreductase ITG08_17000 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ITG08_17005 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_17010 PF00005 ABC transporter ITG08_17010 PF00571 CBS domain ITG08_17015 PF01047 MarR family ITG08_17020 PF00171 Aldehyde dehydrogenase family ITG08_17030 PF00465 Iron-containing alcohol dehydrogenase ITG08_17050 PF16925 Tetracyclin repressor-like, C-terminal domain ITG08_17050 PF00440 Bacterial regulatory proteins, tetR family ITG08_17070 PF00583 Acetyltransferase (GNAT) family ITG08_17075 PF00202 Aminotransferase class-III ITG08_17080 PF06339 Ectoine synthase ITG08_17085 PF00696 Amino acid kinase family ITG08_17085 PF13840 ACT domain ITG08_17090 PF00158 Sigma-54 interaction domain ITG08_17090 PF02954 Bacterial regulatory protein, Fis family ITG08_17090 PF01590 GAF domain ITG08_17115 PF02142 MGS-like domain ITG08_17115 PF00781 Diacylglycerol kinase catalytic domain ITG08_17120 PF00924 Mechanosensitive ion channel ITG08_17145 PF01594 AI-2E family transporter ITG08_17155 PF14602 Hexapeptide repeat of succinyl-transferase ITG08_17155 PF12464 Maltose acetyltransferase ITG08_17160 PF00962 Adenosine/AMP deaminase ITG08_17165 PF03466 LysR substrate binding domain ITG08_17165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_17180 PF02801 Beta-ketoacyl synthase, C-terminal domain ITG08_17180 PF14765 Polyketide synthase dehydratase ITG08_17180 PF00698 Acyl transferase domain ITG08_17180 PF08240 Alcohol dehydrogenase GroES-like domain ITG08_17180 PF16197 Ketoacyl-synthetase C-terminal extension ITG08_17180 PF00109 Beta-ketoacyl synthase, N-terminal domain ITG08_17180 PF00550 Phosphopantetheine attachment site ITG08_17180 PF08659 KR domain ITG08_17205 PF00809 Pterin binding enzyme ITG08_17205 PF02965 Vitamin B12 dependent methionine synthase, activation domain ITG08_17205 PF02607 B12 binding domain ITG08_17205 PF02310 B12 binding domain ITG08_17205 PF02574 Homocysteine S-methyltransferase ITG08_17215 PF00106 short chain dehydrogenase ITG08_17220 PF00753 Metallo-beta-lactamase superfamily ITG08_17220 PF14863 Alkyl sulfatase dimerisation ITG08_17220 PF14864 Alkyl sulfatase C-terminal ITG08_17225 PF03466 LysR substrate binding domain ITG08_17225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_17235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ITG08_17245 PF00232 Glycosyl hydrolase family 1 ITG08_17250 PF00356 Bacterial regulatory proteins, lacI family ITG08_17255 PF12464 Maltose acetyltransferase ITG08_17255 PF14602 Hexapeptide repeat of succinyl-transferase ITG08_17260 PF03707 Bacterial signalling protein N terminal repeat ITG08_17260 PF00990 Diguanylate cyclase, GGDEF domain ITG08_17260 PF00563 EAL domain ITG08_17295 PF07690 Major Facilitator Superfamily ITG08_17300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_17300 PF03466 LysR substrate binding domain ITG08_17320 PF13091 PLD-like domain ITG08_17325 PF00881 Nitroreductase family ITG08_17335 PF01177 Asp/Glu/Hydantoin racemase ITG08_17345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_17345 PF03466 LysR substrate binding domain ITG08_17350 PF00106 short chain dehydrogenase ITG08_17355 PF01266 FAD dependent oxidoreductase ITG08_17355 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ITG08_17360 PF08220 DeoR-like helix-turn-helix domain ITG08_17360 PF00455 DeoR C terminal sensor domain ITG08_17365 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ITG08_17365 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ITG08_17370 PF00230 Major intrinsic protein ITG08_17380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_17380 PF03466 LysR substrate binding domain ITG08_17385 PF01758 Sodium Bile acid symporter family ITG08_17400 PF00440 Bacterial regulatory proteins, tetR family ITG08_17400 PF17932 Tetracyclin repressor-like, C-terminal domain ITG08_17405 PF01852 START domain ITG08_17410 PF00535 Glycosyl transferase family 2 ITG08_17410 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 ITG08_17425 PF06224 Winged helix DNA-binding domain ITG08_17430 PF03466 LysR substrate binding domain ITG08_17430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_17440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ITG08_17440 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ITG08_17455 PF00455 DeoR C terminal sensor domain ITG08_17455 PF08220 DeoR-like helix-turn-helix domain ITG08_17460 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ITG08_17460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ITG08_17465 PF17042 Nucleotide-binding C-terminal domain ITG08_17465 PF07005 Sugar-binding N-terminal domain ITG08_17470 PF00596 Class II Aldolase and Adducin N-terminal domain ITG08_17475 PF01261 Xylose isomerase-like TIM barrel ITG08_17480 PF02447 GntP family permease ITG08_17485 PF02595 Glycerate kinase family ITG08_17490 PF06628 Catalase-related immune-responsive ITG08_17490 PF00199 Catalase ITG08_17495 PF01734 Patatin-like phospholipase ITG08_17500 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ITG08_17500 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ITG08_17510 PF00970 Oxidoreductase FAD-binding domain ITG08_17510 PF00175 Oxidoreductase NAD-binding domain ITG08_17515 PF01553 Acyltransferase ITG08_17530 PF00128 Alpha amylase, catalytic domain ITG08_17530 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ITG08_17535 PF02264 LamB porin ITG08_17550 PF00128 Alpha amylase, catalytic domain ITG08_17550 PF02903 Alpha amylase, N-terminal ig-like domain ITG08_17560 PF17967 Pullulanase N2 domain ITG08_17560 PF11852 Domain of unknown function (DUF3372) ITG08_17560 PF18494 Pullulanase Ins domain ITG08_17560 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ITG08_17560 PF03714 Bacterial pullanase-associated domain ITG08_17565 PF00128 Alpha amylase, catalytic domain ITG08_17565 PF02903 Alpha amylase, N-terminal ig-like domain ITG08_17565 PF16657 Maltogenic Amylase, C-terminal domain ITG08_17575 PF01810 LysE type translocator ITG08_17580 PF01037 Lrp/AsnC ligand binding domain ITG08_17585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_17585 PF03466 LysR substrate binding domain ITG08_17590 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ITG08_17600 PF01568 Molydopterin dinucleotide binding domain ITG08_17600 PF00384 Molybdopterin oxidoreductase ITG08_17600 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ITG08_17605 PF03916 Polysulphide reductase, NrfD ITG08_17610 PF13247 4Fe-4S dicluster domain ITG08_17615 PF00512 His Kinase A (phospho-acceptor) domain ITG08_17615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_17620 PF00196 Bacterial regulatory proteins, luxR family ITG08_17620 PF00072 Response regulator receiver domain ITG08_17630 PF00375 Sodium:dicarboxylate symporter family ITG08_17640 PF02630 SCO1/SenC ITG08_17655 PF00196 Bacterial regulatory proteins, luxR family ITG08_17655 PF17874 MalT-like TPR region ITG08_17660 PF00343 Carbohydrate phosphorylase ITG08_17665 PF02446 4-alpha-glucanotransferase ITG08_17670 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ITG08_17670 PF00128 Alpha amylase, catalytic domain ITG08_17670 PF02806 Alpha amylase, C-terminal all-beta domain ITG08_17685 PF12558 ATP-binding cassette cobalt transporter ITG08_17685 PF00005 ABC transporter ITG08_17690 PF07155 ECF-type riboflavin transporter, S component ITG08_17695 PF00529 HlyD membrane-fusion protein of T1SS ITG08_17695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG08_17700 PF11742 Protein of unknown function (DUF3302) ITG08_17710 PF00990 Diguanylate cyclase, GGDEF domain ITG08_17725 PF01048 Phosphorylase superfamily ITG08_17730 PF17969 L,D-transpeptidase C-terminal domain ITG08_17730 PF01476 LysM domain ITG08_17730 PF03734 L,D-transpeptidase catalytic domain ITG08_17740 PF00271 Helicase conserved C-terminal domain ITG08_17740 PF00270 DEAD/DEAH box helicase ITG08_17745 PF00657 GDSL-like Lipase/Acylhydrolase ITG08_17750 PF00561 alpha/beta hydrolase fold ITG08_17755 PF03280 Proteobacterial lipase chaperone protein ITG08_17760 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ITG08_17760 PF00326 Prolyl oligopeptidase family ITG08_17765 PF07715 TonB-dependent Receptor Plug Domain ITG08_17765 PF00593 TonB dependent receptor ITG08_17770 PF00082 Subtilase family ITG08_17770 PF01483 Proprotein convertase P-domain ITG08_17785 PF00672 HAMP domain ITG08_17785 PF16591 Helical bimodular sensor domain ITG08_17785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_17790 PF12849 PBP superfamily domain ITG08_17795 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_17800 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_17805 PF00005 ABC transporter ITG08_17810 PF17158 Membrane-associated sensor, integral membrane domain ITG08_17810 PF00990 Diguanylate cyclase, GGDEF domain ITG08_17820 PF00092 von Willebrand factor type A domain ITG08_17820 PF07584 Aerotolerance regulator N-terminal ITG08_17825 PF07584 Aerotolerance regulator N-terminal ITG08_17825 PF00092 von Willebrand factor type A domain ITG08_17835 PF01882 Protein of unknown function DUF58 ITG08_17840 PF07726 ATPase family associated with various cellular activities (AAA) ITG08_17840 PF17863 AAA lid domain ITG08_17845 PF00672 HAMP domain ITG08_17845 PF02743 Cache domain ITG08_17845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_17855 PF08402 TOBE domain ITG08_17855 PF00005 ABC transporter ITG08_17860 PF01547 Bacterial extracellular solute-binding protein ITG08_17865 PF14785 Maltose transport system permease protein MalF P2 domain ITG08_17865 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_17870 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_17895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_17895 PF03466 LysR substrate binding domain ITG08_17900 PF07690 Major Facilitator Superfamily ITG08_17915 PF00873 AcrB/AcrD/AcrF family ITG08_17920 PF00529 HlyD membrane-fusion protein of T1SS ITG08_17920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG08_17925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG08_17930 PF12704 MacB-like periplasmic core domain ITG08_17930 PF00005 ABC transporter ITG08_17930 PF02687 FtsX-like permease family ITG08_17935 PF00512 His Kinase A (phospho-acceptor) domain ITG08_17935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_17935 PF00672 HAMP domain ITG08_17940 PF00486 Transcriptional regulatory protein, C terminal ITG08_17940 PF00072 Response regulator receiver domain ITG08_17950 PF02687 FtsX-like permease family ITG08_17950 PF12704 MacB-like periplasmic core domain ITG08_17955 PF00005 ABC transporter ITG08_17965 PF07715 TonB-dependent Receptor Plug Domain ITG08_17965 PF00593 TonB dependent receptor ITG08_17970 PF02502 Ribose/Galactose Isomerase ITG08_17975 PF00892 EamA-like transporter family ITG08_18000 PF09339 IclR helix-turn-helix domain ITG08_18000 PF01614 Bacterial transcriptional regulator ITG08_18010 PF10688 Bacterial inner membrane protein ITG08_18025 PF00474 Sodium:solute symporter family ITG08_18030 PF02614 Glucuronate isomerase ITG08_18050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_18050 PF03466 LysR substrate binding domain ITG08_18060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_18060 PF00072 Response regulator receiver domain ITG08_18065 PF17327 Acyl homoserine lactone synthase ITG08_18070 PF04151 Bacterial pre-peptidase C-terminal domain ITG08_18070 PF08453 Peptidase family M9 N-terminal ITG08_18070 PF01752 Collagenase ITG08_18085 PF00463 Isocitrate lyase family ITG08_18090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_18090 PF03466 LysR substrate binding domain ITG08_18095 PF01274 Malate synthase ITG08_18100 PF00171 Aldehyde dehydrogenase family ITG08_18105 PF01614 Bacterial transcriptional regulator ITG08_18105 PF09339 IclR helix-turn-helix domain ITG08_18110 PF01515 Phosphate acetyl/butaryl transferase ITG08_18115 PF01925 Sulfite exporter TauE/SafE ITG08_18120 PF06213 Cobalamin biosynthesis protein CobT ITG08_18120 PF11775 Cobalamin biosynthesis protein CobT VWA domain ITG08_18125 PF07728 AAA domain (dynein-related subfamily) ITG08_18125 PF08406 CbbQ/NirQ/NorQ C-terminal ITG08_18125 PF12556 Cobaltochelatase CobS subunit N terminal ITG08_18130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ITG08_18130 PF00205 Thiamine pyrophosphate enzyme, central domain ITG08_18130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ITG08_18145 PF01266 FAD dependent oxidoreductase ITG08_18150 PF03480 Bacterial extracellular solute-binding protein, family 7 ITG08_18155 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ITG08_18160 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ITG08_18160 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ITG08_18175 PF02028 BCCT, betaine/carnitine/choline family transporter ITG08_18185 PF05661 Protein of unknown function (DUF808) ITG08_18190 PF01979 Amidohydrolase family ITG08_18200 PF00111 2Fe-2S iron-sulfur cluster binding domain ITG08_18200 PF03476 MOSC N-terminal beta barrel domain ITG08_18200 PF03473 MOSC domain ITG08_18205 PF02540 NAD synthase ITG08_18250 PF00005 ABC transporter ITG08_18255 PF01032 FecCD transport family ITG08_18265 PF02472 Biopolymer transport protein ExbD/TolR ITG08_18270 PF01618 MotA/TolQ/ExbB proton channel family ITG08_18275 PF03544 Gram-negative bacterial TonB protein C-terminal ITG08_18280 PF04055 Radical SAM superfamily ITG08_18285 PF06228 Haem utilisation ChuX/HutX ITG08_18290 PF01243 Pyridoxamine 5'-phosphate oxidase ITG08_18295 PF01923 Cobalamin adenosyltransferase ITG08_18300 PF01584 CheW-like domain ITG08_18300 PF00072 Response regulator receiver domain ITG08_18310 PF00128 Alpha amylase, catalytic domain ITG08_18315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_18315 PF00672 HAMP domain ITG08_18315 PF02743 Cache domain ITG08_18320 PF07670 Nucleoside recognition ITG08_18345 PF08525 Opacity-associated protein A N-terminal motif ITG08_18345 PF01551 Peptidase family M23 ITG08_18345 PF01476 LysM domain ITG08_18350 PF08448 PAS fold ITG08_18350 PF08447 PAS fold ITG08_18350 PF00563 EAL domain ITG08_18350 PF00990 Diguanylate cyclase, GGDEF domain ITG08_18355 PF03466 LysR substrate binding domain ITG08_18355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_18360 PF07690 Major Facilitator Superfamily ITG08_18370 PF00462 Glutaredoxin ITG08_18375 PF00892 EamA-like transporter family ITG08_18395 PF00085 Thioredoxin ITG08_18400 PF11412 Disulphide bond corrector protein DsbC ITG08_18400 PF02683 Cytochrome C biogenesis protein transmembrane region ITG08_18415 PF00924 Mechanosensitive ion channel ITG08_18415 PF05552 Conserved TM helix ITG08_18455 PF00664 ABC transporter transmembrane region ITG08_18455 PF00005 ABC transporter ITG08_18455 PF03412 Peptidase C39 family ITG08_18465 PF02321 Outer membrane efflux protein ITG08_18485 PF00248 Aldo/keto reductase family ITG08_18490 PF03880 DbpA RNA binding domain ITG08_18490 PF00271 Helicase conserved C-terminal domain ITG08_18490 PF00270 DEAD/DEAH box helicase ITG08_18505 PF07733 Bacterial DNA polymerase III alpha NTPase domain ITG08_18505 PF02811 PHP domain ITG08_18505 PF00929 Exonuclease ITG08_18505 PF11490 DNA polymerase III polC-type N-terminus II ITG08_18505 PF14579 Helix-hairpin-helix motif ITG08_18505 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ITG08_18515 PF00270 DEAD/DEAH box helicase ITG08_18515 PF00271 Helicase conserved C-terminal domain ITG08_18525 PF00037 4Fe-4S binding domain ITG08_18525 PF11953 Domain of unknown function (DUF3470) ITG08_18530 PF08032 RNA 2'-O ribose methyltransferase substrate binding ITG08_18530 PF00588 SpoU rRNA Methylase family ITG08_18535 PF00248 Aldo/keto reductase family ITG08_18545 PF01546 Peptidase family M20/M25/M40 ITG08_18545 PF07687 Peptidase dimerisation domain ITG08_18560 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ITG08_18565 PF13533 Biotin-lipoyl like ITG08_18570 PF00873 AcrB/AcrD/AcrF family ITG08_18575 PF01575 MaoC like domain ITG08_18580 PF12849 PBP superfamily domain ITG08_18590 PF12833 Helix-turn-helix domain ITG08_18595 PF08206 Ribonuclease B OB domain ITG08_18595 PF17876 Cold shock domain ITG08_18595 PF00773 RNB domain ITG08_18595 PF00575 S1 RNA binding domain ITG08_18600 PF03880 DbpA RNA binding domain ITG08_18600 PF00270 DEAD/DEAH box helicase ITG08_18600 PF00271 Helicase conserved C-terminal domain ITG08_18605 PF00871 Acetokinase family ITG08_18620 PF08240 Alcohol dehydrogenase GroES-like domain ITG08_18620 PF00107 Zinc-binding dehydrogenase ITG08_18640 PF07715 TonB-dependent Receptor Plug Domain ITG08_18640 PF00593 TonB dependent receptor ITG08_18645 PF07715 TonB-dependent Receptor Plug Domain ITG08_18645 PF07660 Secretin and TonB N terminus short domain ITG08_18645 PF00593 TonB dependent receptor ITG08_18650 PF01497 Periplasmic binding protein ITG08_18655 PF01032 FecCD transport family ITG08_18660 PF01032 FecCD transport family ITG08_18665 PF00005 ABC transporter ITG08_18670 PF00892 EamA-like transporter family ITG08_18675 PF00135 Carboxylesterase family ITG08_18680 PF03466 LysR substrate binding domain ITG08_18680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_18690 PF00892 EamA-like transporter family ITG08_18695 PF00128 Alpha amylase, catalytic domain ITG08_18700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_18700 PF03466 LysR substrate binding domain ITG08_18705 PF01554 MatE ITG08_18730 PF00478 IMP dehydrogenase / GMP reductase domain ITG08_18985 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG08_18985 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ITG08_19000 PF00392 Bacterial regulatory proteins, gntR family ITG08_19005 PF00171 Aldehyde dehydrogenase family ITG08_19010 PF05544 Proline racemase ITG08_19015 PF05690 Thiazole biosynthesis protein ThiG ITG08_19015 PF01266 FAD dependent oxidoreductase ITG08_19025 PF02423 Ornithine cyclodeaminase/mu-crystallin family ITG08_19030 PF00701 Dihydrodipicolinate synthetase family ITG08_19035 PF00005 ABC transporter ITG08_19035 PF08402 TOBE domain ITG08_19040 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_19045 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_19050 PF13417 Glutathione S-transferase, N-terminal domain ITG08_19050 PF00043 Glutathione S-transferase, C-terminal domain ITG08_19075 PF00892 EamA-like transporter family ITG08_19080 PF08543 Phosphomethylpyrimidine kinase ITG08_19085 PF00005 ABC transporter ITG08_19090 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_19095 PF09084 NMT1/THI5 like ITG08_19100 PF03070 TENA/THI-4/PQQC family ITG08_19105 PF02110 Hydroxyethylthiazole kinase family ITG08_19110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_19110 PF00672 HAMP domain ITG08_19110 PF02743 Cache domain ITG08_19115 PF02581 Thiamine monophosphate synthase ITG08_19125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_19125 PF03466 LysR substrate binding domain ITG08_19140 PF13533 Biotin-lipoyl like ITG08_19150 PF01594 AI-2E family transporter ITG08_19175 PF01497 Periplasmic binding protein ITG08_19180 PF01032 FecCD transport family ITG08_19185 PF01032 FecCD transport family ITG08_19190 PF00005 ABC transporter ITG08_19195 PF00072 Response regulator receiver domain ITG08_19200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_19200 PF00497 Bacterial extracellular solute-binding proteins, family 3 ITG08_19200 PF00072 Response regulator receiver domain ITG08_19200 PF01627 Hpt domain ITG08_19200 PF00512 His Kinase A (phospho-acceptor) domain ITG08_19205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_19205 PF03466 LysR substrate binding domain ITG08_19210 PF07690 Major Facilitator Superfamily ITG08_19215 PF05547 Immune inhibitor A peptidase M6 ITG08_19215 PF00801 PKD domain ITG08_19230 PF01037 Lrp/AsnC ligand binding domain ITG08_19235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_19235 PF08447 PAS fold ITG08_19240 PF02779 Transketolase, pyrimidine binding domain ITG08_19240 PF02780 Transketolase, C-terminal domain ITG08_19240 PF00456 Transketolase, thiamine diphosphate binding domain ITG08_19245 PF00923 Transaldolase/Fructose-6-phosphate aldolase ITG08_19255 PF00990 Diguanylate cyclase, GGDEF domain ITG08_19255 PF01590 GAF domain ITG08_19255 PF00563 EAL domain ITG08_19255 PF00360 Phytochrome region ITG08_19260 PF00581 Rhodanese-like domain ITG08_19280 PF00899 ThiF family ITG08_19285 PF00994 Probable molybdopterin binding domain ITG08_19285 PF03454 MoeA C-terminal region (domain IV) ITG08_19285 PF03453 MoeA N-terminal region (domain I and II) ITG08_19290 PF01227 GTP cyclohydrolase I ITG08_19300 PF07152 YaeQ protein ITG08_19305 PF00313 'Cold-shock' DNA-binding domain ITG08_19310 PF07995 Glucose / Sorbosone dehydrogenase ITG08_19315 PF07690 Major Facilitator Superfamily ITG08_19320 PF00005 ABC transporter ITG08_19330 PF12833 Helix-turn-helix domain ITG08_19335 PF07715 TonB-dependent Receptor Plug Domain ITG08_19335 PF00593 TonB dependent receptor ITG08_19345 PF01032 FecCD transport family ITG08_19350 PF00378 Enoyl-CoA hydratase/isomerase ITG08_19365 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG08_19365 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ITG08_19370 PF00132 Bacterial transferase hexapeptide (six repeats) ITG08_19385 PF00529 HlyD membrane-fusion protein of T1SS ITG08_19385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG08_19390 PF00873 AcrB/AcrD/AcrF family ITG08_19405 PF02018 Carbohydrate binding domain ITG08_19405 PF02927 Cellulase N-terminal ig-like domain ITG08_19405 PF00404 Dockerin type I domain ITG08_19405 PF00759 Glycosyl hydrolase family 9 ITG08_19425 PF08274 PhnA Zinc-Ribbon ITG08_19425 PF03831 PhnA domain ITG08_19450 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_19455 PF00497 Bacterial extracellular solute-binding proteins, family 3 ITG08_19460 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_19465 PF00005 ABC transporter ITG08_19470 PF00465 Iron-containing alcohol dehydrogenase ITG08_19475 PF06719 AraC-type transcriptional regulator N-terminus ITG08_19475 PF12833 Helix-turn-helix domain ITG08_19480 PF01042 Endoribonuclease L-PSP ITG08_19495 PF13302 Acetyltransferase (GNAT) domain ITG08_19515 PF02028 BCCT, betaine/carnitine/choline family transporter ITG08_19520 PF06483 Chitinase C ITG08_19520 PF00704 Glycosyl hydrolases family 18 ITG08_19525 PF00990 Diguanylate cyclase, GGDEF domain ITG08_19540 PF00768 D-alanyl-D-alanine carboxypeptidase ITG08_19540 PF07943 Penicillin-binding protein 5, C-terminal domain ITG08_19550 PF00849 RNA pseudouridylate synthase ITG08_19560 PF16884 N-terminal domain of oxidoreductase ITG08_19560 PF00107 Zinc-binding dehydrogenase ITG08_19565 PF16925 Tetracyclin repressor-like, C-terminal domain ITG08_19565 PF00440 Bacterial regulatory proteins, tetR family ITG08_19570 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ITG08_19570 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ITG08_19580 PF04972 BON domain ITG08_19580 PF00691 OmpA family ITG08_19590 PF01590 GAF domain ITG08_19590 PF00158 Sigma-54 interaction domain ITG08_19595 PF00175 Oxidoreductase NAD-binding domain ITG08_19595 PF00970 Oxidoreductase FAD-binding domain ITG08_19595 PF00042 Globin ITG08_19600 PF00356 Bacterial regulatory proteins, lacI family ITG08_19610 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_19615 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_19620 PF00005 ABC transporter ITG08_19620 PF08402 TOBE domain ITG08_19625 PF00149 Calcineurin-like phosphoesterase ITG08_19635 PF00654 Voltage gated chloride channel ITG08_19640 PF02492 CobW/HypB/UreG, nucleotide-binding domain ITG08_19640 PF07683 Cobalamin synthesis protein cobW C-terminal domain ITG08_19645 PF00270 DEAD/DEAH box helicase ITG08_19645 PF00271 Helicase conserved C-terminal domain ITG08_19650 PF01810 LysE type translocator ITG08_19680 PF00072 Response regulator receiver domain ITG08_19680 PF00486 Transcriptional regulatory protein, C terminal ITG08_19685 PF00672 HAMP domain ITG08_19685 PF00512 His Kinase A (phospho-acceptor) domain ITG08_19685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_19700 PF01037 Lrp/AsnC ligand binding domain ITG08_19720 PF00106 short chain dehydrogenase ITG08_19725 PF02803 Thiolase, C-terminal domain ITG08_19725 PF00108 Thiolase, N-terminal domain ITG08_19735 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus ITG08_19745 PF03264 NapC/NirT cytochrome c family, N-terminal region ITG08_19750 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ITG08_19755 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ITG08_19755 PF00384 Molybdopterin oxidoreductase ITG08_19755 PF01568 Molydopterin dinucleotide binding domain ITG08_19765 PF12800 4Fe-4S binding domain ITG08_19765 PF13187 4Fe-4S dicluster domain ITG08_19765 PF00037 4Fe-4S binding domain ITG08_19770 PF00672 HAMP domain ITG08_19770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_19770 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ITG08_19770 PF07730 Histidine kinase ITG08_19775 PF00196 Bacterial regulatory proteins, luxR family ITG08_19775 PF00072 Response regulator receiver domain ITG08_19780 PF03606 C4-dicarboxylate anaerobic carrier ITG08_19795 PF12262 Bacterial virulence factor lipase N-terminal ITG08_19800 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ITG08_19805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG08_19810 PF00873 AcrB/AcrD/AcrF family ITG08_19835 PF00392 Bacterial regulatory proteins, gntR family ITG08_19835 PF07702 UTRA domain ITG08_19840 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ITG08_19840 PF02378 Phosphotransferase system, EIIC ITG08_19840 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ITG08_19845 PF07748 Glycosyl hydrolases family 38 C-terminal domain ITG08_19845 PF01074 Glycosyl hydrolases family 38 N-terminal domain ITG08_19845 PF09261 Alpha mannosidase middle domain ITG08_19850 PF02595 Glycerate kinase family ITG08_19855 PF01238 Phosphomannose isomerase type I ITG08_19865 PF00814 Glycoprotease family ITG08_19865 PF00583 Acetyltransferase (GNAT) family ITG08_19870 PF00990 Diguanylate cyclase, GGDEF domain ITG08_19875 PF01926 50S ribosome-binding GTPase ITG08_19885 PF00072 Response regulator receiver domain ITG08_19885 PF00486 Transcriptional regulatory protein, C terminal ITG08_19895 PF00196 Bacterial regulatory proteins, luxR family ITG08_19930 PF01212 Beta-eliminating lyase ITG08_19935 PF00293 NUDIX domain ITG08_19940 PF07728 AAA domain (dynein-related subfamily) ITG08_19940 PF17868 AAA lid domain ITG08_19940 PF12592 Protein of unknown function (DUF3763) ITG08_19945 PF05762 VWA domain containing CoxE-like protein ITG08_19970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_19970 PF00672 HAMP domain ITG08_20020 PF18267 Rubredoxin NAD+ reductase C-terminal domain ITG08_20020 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG08_20020 PF04324 BFD-like [2Fe-2S] binding domain ITG08_20020 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ITG08_20020 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ITG08_20025 PF13806 Rieske-like [2Fe-2S] domain ITG08_20030 PF01226 Formate/nitrite transporter ITG08_20035 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ITG08_20035 PF14824 Sirohaem biosynthesis protein central ITG08_20035 PF10414 Sirohaem synthase dimerisation region ITG08_20050 PF00072 Response regulator receiver domain ITG08_20050 PF00486 Transcriptional regulatory protein, C terminal ITG08_20055 PF16527 Two-component sensor protein CpxA, periplasmic domain ITG08_20055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_20055 PF00512 His Kinase A (phospho-acceptor) domain ITG08_20055 PF00672 HAMP domain ITG08_20060 PF00375 Sodium:dicarboxylate symporter family ITG08_20065 PF07715 TonB-dependent Receptor Plug Domain ITG08_20065 PF00593 TonB dependent receptor ITG08_20075 PF01618 MotA/TolQ/ExbB proton channel family ITG08_20080 PF01618 MotA/TolQ/ExbB proton channel family ITG08_20085 PF02472 Biopolymer transport protein ExbD/TolR ITG08_20130 PF01297 Zinc-uptake complex component A periplasmic ITG08_20135 PF00005 ABC transporter ITG08_20140 PF00950 ABC 3 transport family ITG08_20160 PF11756 Nitrous oxide-stimulated promoter ITG08_20165 PF01554 MatE ITG08_20185 PF07690 Major Facilitator Superfamily ITG08_20190 PF12833 Helix-turn-helix domain ITG08_20190 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ITG08_20195 PF13193 AMP-binding enzyme C-terminal domain ITG08_20195 PF00501 AMP-binding enzyme ITG08_20200 PF05199 GMC oxidoreductase ITG08_20200 PF00732 GMC oxidoreductase ITG08_20205 PF00085 Thioredoxin ITG08_20210 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ITG08_20210 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ITG08_20225 PF04143 Sulphur transport ITG08_20240 PF13597 Anaerobic ribonucleoside-triphosphate reductase ITG08_20240 PF03477 ATP cone domain ITG08_20250 PF00155 Aminotransferase class I and II ITG08_20255 PF18030 RimK PreATP-grasp domain ITG08_20255 PF08443 RimK-like ATP-grasp domain ITG08_20260 PF00005 ABC transporter ITG08_20260 PF12848 ABC transporter ITG08_20275 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ITG08_20275 PF07685 CobB/CobQ-like glutamine amidotransferase domain ITG08_20285 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_20290 PF00005 ABC transporter ITG08_20290 PF03459 TOBE domain ITG08_20300 PF00360 Phytochrome region ITG08_20300 PF00990 Diguanylate cyclase, GGDEF domain ITG08_20300 PF01590 GAF domain ITG08_20300 PF00563 EAL domain ITG08_20310 PF00990 Diguanylate cyclase, GGDEF domain ITG08_20310 PF17158 Membrane-associated sensor, integral membrane domain ITG08_20325 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ITG08_20325 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ITG08_20325 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ITG08_20330 PF02233 NAD(P) transhydrogenase beta subunit ITG08_20380 PF02796 Helix-turn-helix domain of resolvase ITG08_20380 PF00239 Resolvase, N terminal domain ITG08_20430 PF00072 Response regulator receiver domain ITG08_20430 PF00486 Transcriptional regulatory protein, C terminal ITG08_20445 PF03701 Uncharacterised protein family (UPF0181) ITG08_20525 PF01253 Translation initiation factor SUI1 ITG08_20540 PF07478 D-ala D-ala ligase C-terminus ITG08_20540 PF01820 D-ala D-ala ligase N-terminus ITG08_20545 PF05036 Sporulation related domain ITG08_20550 PF13607 Succinyl-CoA ligase like flavodoxin domain ITG08_20550 PF00583 Acetyltransferase (GNAT) family ITG08_20550 PF13380 CoA binding domain ITG08_20555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_20555 PF03466 LysR substrate binding domain ITG08_20560 PF07715 TonB-dependent Receptor Plug Domain ITG08_20560 PF04886 PT repeat ITG08_20560 PF00593 TonB dependent receptor ITG08_20565 PF16363 GDP-mannose 4,6 dehydratase ITG08_20570 PF03746 LamB/YcsF family ITG08_20575 PF02682 Carboxyltransferase domain, subdomain C and D ITG08_20580 PF02626 Carboxyltransferase domain, subdomain A and B ITG08_20595 PF00005 ABC transporter ITG08_20600 PF13472 GDSL-like Lipase/Acylhydrolase family ITG08_20605 PF12241 Trans-2-enoyl-CoA reductase catalytic region ITG08_20605 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ITG08_20605 PF07055 Enoyl reductase FAD binding domain ITG08_20610 PF00990 Diguanylate cyclase, GGDEF domain ITG08_20610 PF00498 FHA domain ITG08_20610 PF00563 EAL domain ITG08_20620 PF03717 Penicillin-binding Protein dimerisation domain ITG08_20620 PF00905 Penicillin binding protein transpeptidase domain ITG08_20625 PF00226 DnaJ domain ITG08_20625 PF01556 DnaJ C terminal domain ITG08_20625 PF00684 DnaJ central domain ITG08_20645 PF00892 EamA-like transporter family ITG08_20650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ITG08_20650 PF12793 Sugar transport-related sRNA regulator N-term ITG08_20660 PF03061 Thioesterase superfamily ITG08_20665 PF01435 Peptidase family M48 ITG08_20675 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ITG08_20680 PF12262 Bacterial virulence factor lipase N-terminal ITG08_20695 PF03466 LysR substrate binding domain ITG08_20695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_20710 PF08543 Phosphomethylpyrimidine kinase ITG08_20715 PF00155 Aminotransferase class I and II ITG08_20720 PF02080 TrkA-C domain ITG08_20720 PF06826 Predicted Permease Membrane Region ITG08_20730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG08_20730 PF00529 HlyD membrane-fusion protein of T1SS ITG08_20745 PF00135 Carboxylesterase family ITG08_20750 PF13091 PLD-like domain ITG08_20755 PF17243 POTRA domain TamA domain 1 ITG08_20755 PF01103 Surface antigen ITG08_20760 PF00271 Helicase conserved C-terminal domain ITG08_20760 PF00270 DEAD/DEAH box helicase ITG08_20775 PF03741 Integral membrane protein TerC family ITG08_20780 PF00149 Calcineurin-like phosphoesterase ITG08_20780 PF02872 5'-nucleotidase, C-terminal domain ITG08_20785 PF11398 Protein of unknown function (DUF2813) ITG08_20790 PF06496 Protein of unknown function (DUF1097) ITG08_20795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_20795 PF03466 LysR substrate binding domain ITG08_20800 PF01226 Formate/nitrite transporter ITG08_20805 PF04264 YceI-like domain ITG08_20810 PF01292 Prokaryotic cytochrome b561 ITG08_20825 PF00563 EAL domain ITG08_20825 PF12792 CSS motif domain associated with EAL ITG08_20830 PF00873 AcrB/AcrD/AcrF family ITG08_20840 PF00529 HlyD membrane-fusion protein of T1SS ITG08_20840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG08_20850 PF00271 Helicase conserved C-terminal domain ITG08_20850 PF00270 DEAD/DEAH box helicase ITG08_20855 PF04336 Acyl carrier protein phosphodiesterase ITG08_20860 PF03222 Tryptophan/tyrosine permease family ITG08_20865 PF00672 HAMP domain ITG08_20865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_20870 PF13419 Haloacid dehalogenase-like hydrolase ITG08_20875 PF11849 Domain of unknown function (DUF3369) ITG08_20890 PF00294 pfkB family carbohydrate kinase ITG08_20895 PF01268 Formate--tetrahydrofolate ligase ITG08_20900 PF17158 Membrane-associated sensor, integral membrane domain ITG08_20900 PF00990 Diguanylate cyclase, GGDEF domain ITG08_20905 PF13419 Haloacid dehalogenase-like hydrolase ITG08_20910 PF00472 RF-1 domain ITG08_20930 PF01571 Aminomethyltransferase folate-binding domain ITG08_20930 PF08669 Glycine cleavage T-protein C-terminal barrel domain ITG08_20940 PF00464 Serine hydroxymethyltransferase ITG08_20945 PF01597 Glycine cleavage H-protein ITG08_20950 PF02347 Glycine cleavage system P-protein ITG08_20985 PF01554 MatE ITG08_20995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_20995 PF00672 HAMP domain ITG08_20995 PF02743 Cache domain ITG08_21000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_21000 PF03466 LysR substrate binding domain ITG08_21010 PF01810 LysE type translocator ITG08_21030 PF00579 tRNA synthetases class I (W and Y) ITG08_21040 PF00291 Pyridoxal-phosphate dependent enzyme ITG08_21045 PF07690 Major Facilitator Superfamily ITG08_21055 PF01161 Phosphatidylethanolamine-binding protein ITG08_21060 PF08787 Alginate lyase ITG08_21065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_21065 PF03466 LysR substrate binding domain ITG08_21070 PF13533 Biotin-lipoyl like ITG08_21075 PF07690 Major Facilitator Superfamily ITG08_21090 PF02743 Cache domain ITG08_21090 PF00672 HAMP domain ITG08_21090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_21105 PF04542 Sigma-70 region 2 ITG08_21105 PF00140 Sigma-70 factor, region 1.2 ITG08_21105 PF04539 Sigma-70 region 3 ITG08_21105 PF04545 Sigma-70, region 4 ITG08_21125 PF13533 Biotin-lipoyl like ITG08_21130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_21130 PF00512 His Kinase A (phospho-acceptor) domain ITG08_21130 PF00072 Response regulator receiver domain ITG08_21130 PF09308 LuxQ, periplasmic ITG08_21135 PF02321 Outer membrane efflux protein ITG08_21140 PF00664 ABC transporter transmembrane region ITG08_21140 PF00005 ABC transporter ITG08_21145 PF00005 ABC transporter ITG08_21155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_21155 PF00672 HAMP domain ITG08_21155 PF00072 Response regulator receiver domain ITG08_21155 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ITG08_21155 PF01627 Hpt domain ITG08_21155 PF00512 His Kinase A (phospho-acceptor) domain ITG08_21180 PF00672 HAMP domain ITG08_21180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG08_21195 PF13186 Iron-sulfur cluster-binding domain ITG08_21195 PF04055 Radical SAM superfamily ITG08_21200 PF03781 Sulfatase-modifying factor enzyme 1 ITG08_21210 PF00781 Diacylglycerol kinase catalytic domain ITG08_21215 PF03466 LysR substrate binding domain ITG08_21215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_21230 PF00092 von Willebrand factor type A domain ITG08_21245 PF17863 AAA lid domain ITG08_21245 PF07726 ATPase family associated with various cellular activities (AAA) ITG08_21255 PF00884 Sulfatase ITG08_21260 PF00884 Sulfatase ITG08_21265 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ITG08_21280 PF00962 Adenosine/AMP deaminase ITG08_21285 PF00583 Acetyltransferase (GNAT) family ITG08_21295 PF02469 Fasciclin domain ITG08_21320 PF02567 Phenazine biosynthesis-like protein ITG08_21330 PF00563 EAL domain ITG08_21330 PF00990 Diguanylate cyclase, GGDEF domain ITG08_21330 PF03707 Bacterial signalling protein N terminal repeat ITG08_21345 PF00795 Carbon-nitrogen hydrolase ITG08_21345 PF00583 Acetyltransferase (GNAT) family ITG08_21350 PF00990 Diguanylate cyclase, GGDEF domain ITG08_21350 PF08448 PAS fold ITG08_21360 PF00115 Cytochrome C and Quinol oxidase polypeptide I ITG08_21370 PF00034 Cytochrome c ITG08_21370 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ITG08_21385 PF00561 alpha/beta hydrolase fold ITG08_21400 PF02028 BCCT, betaine/carnitine/choline family transporter ITG08_21410 PF00171 Aldehyde dehydrogenase family ITG08_21420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_21420 PF03466 LysR substrate binding domain ITG08_21430 PF00119 ATP synthase A chain ITG08_21435 PF00137 ATP synthase subunit C ITG08_21440 PF00430 ATP synthase B/B' CF(0) ITG08_21445 PF00213 ATP synthase delta (OSCP) subunit ITG08_21450 PF02874 ATP synthase alpha/beta family, beta-barrel domain ITG08_21450 PF00306 ATP synthase alpha/beta chain, C terminal domain ITG08_21450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ITG08_21455 PF00231 ATP synthase ITG08_21460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ITG08_21460 PF02874 ATP synthase alpha/beta family, beta-barrel domain ITG08_21465 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ITG08_21465 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ITG08_21475 PF00005 ABC transporter ITG08_21475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ITG08_21480 PF12911 N-terminal TM domain of oligopeptide transport permease C ITG08_21480 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_21485 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_21490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ITG08_21505 PF05025 RbsD / FucU transport protein family ITG08_21510 PF00005 ABC transporter ITG08_21515 PF02653 Branched-chain amino acid transport system / permease component ITG08_21520 PF13407 Periplasmic binding protein domain ITG08_21525 PF00294 pfkB family carbohydrate kinase ITG08_21530 PF00356 Bacterial regulatory proteins, lacI family ITG08_21545 PF03707 Bacterial signalling protein N terminal repeat ITG08_21545 PF00990 Diguanylate cyclase, GGDEF domain ITG08_21545 PF00563 EAL domain ITG08_21550 PF00512 His Kinase A (phospho-acceptor) domain ITG08_21550 PF09308 LuxQ, periplasmic ITG08_21550 PF00072 Response regulator receiver domain ITG08_21550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_21590 PF02371 Transposase IS116/IS110/IS902 family ITG08_21590 PF01548 Transposase ITG08_21620 PF01568 Molydopterin dinucleotide binding domain ITG08_21620 PF00384 Molybdopterin oxidoreductase ITG08_21620 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ITG08_21620 PF04324 BFD-like [2Fe-2S] binding domain ITG08_21625 PF18267 Rubredoxin NAD+ reductase C-terminal domain ITG08_21625 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ITG08_21625 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ITG08_21625 PF04324 BFD-like [2Fe-2S] binding domain ITG08_21625 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG08_21635 PF07690 Major Facilitator Superfamily ITG08_21640 PF03793 PASTA domain ITG08_21640 PF00069 Protein kinase domain ITG08_21645 PF00356 Bacterial regulatory proteins, lacI family ITG08_21645 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ITG08_21650 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ITG08_21650 PF00381 PTS HPr component phosphorylation site ITG08_21655 PF00294 pfkB family carbohydrate kinase ITG08_21660 PF02378 Phosphotransferase system, EIIC ITG08_21660 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ITG08_21670 PF02798 Glutathione S-transferase, N-terminal domain ITG08_21675 PF01844 HNH endonuclease ITG08_21690 PF18081 Fanconi anemia-associated nuclease SAP domain ITG08_21690 PF08774 VRR-NUC domain ITG08_21720 PF00672 HAMP domain ITG08_21720 PF00512 His Kinase A (phospho-acceptor) domain ITG08_21720 PF01627 Hpt domain ITG08_21720 PF00072 Response regulator receiver domain ITG08_21720 PF17149 Periplasmic sensor domain found in signal transduction proteins ITG08_21720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_21725 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ITG08_21730 PF02142 MGS-like domain ITG08_21740 PF12462 DNA helicase IV / RNA helicase N terminal ITG08_21740 PF00580 UvrD/REP helicase N-terminal domain ITG08_21740 PF13361 UvrD-like helicase C-terminal domain ITG08_21745 PF12805 FUSC-like inner membrane protein yccS ITG08_21765 PF03466 LysR substrate binding domain ITG08_21765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_21770 PF04055 Radical SAM superfamily ITG08_21775 PF11230 Protein of unknown function (DUF3029) ITG08_21785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_21785 PF03466 LysR substrate binding domain ITG08_21800 PF00892 EamA-like transporter family ITG08_21805 PF13419 Haloacid dehalogenase-like hydrolase ITG08_21815 PF00465 Iron-containing alcohol dehydrogenase ITG08_21835 PF02525 Flavodoxin-like fold ITG08_21840 PF00999 Sodium/hydrogen exchanger family ITG08_21840 PF02254 TrkA-N domain ITG08_21845 PF08240 Alcohol dehydrogenase GroES-like domain ITG08_21845 PF00107 Zinc-binding dehydrogenase ITG08_21850 PF00155 Aminotransferase class I and II ITG08_21855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_21855 PF03466 LysR substrate binding domain ITG08_21860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ITG08_21885 PF01966 HD domain ITG08_21895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_21895 PF03466 LysR substrate binding domain ITG08_21900 PF01906 Putative heavy-metal-binding ITG08_21905 PF01476 LysM domain ITG08_21905 PF08525 Opacity-associated protein A N-terminal motif ITG08_21905 PF01551 Peptidase family M23 ITG08_21930 PF00005 ABC transporter ITG08_21930 PF00664 ABC transporter transmembrane region ITG08_21935 PF00664 ABC transporter transmembrane region ITG08_21935 PF00005 ABC transporter ITG08_21940 PF08264 Anticodon-binding domain of tRNA ITG08_21940 PF00133 tRNA synthetases class I (I, L, M and V) ITG08_21955 PF03313 Serine dehydratase alpha chain ITG08_21955 PF03315 Serine dehydratase beta chain ITG08_21960 PF00854 POT family ITG08_21965 PF08021 Siderophore-interacting FAD-binding domain ITG08_21965 PF04954 Siderophore-interacting protein ITG08_21970 PF00356 Bacterial regulatory proteins, lacI family ITG08_21970 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ITG08_21975 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ITG08_21975 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ITG08_21980 PF01202 Shikimate kinase ITG08_21985 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ITG08_21995 PF03480 Bacterial extracellular solute-binding protein, family 7 ITG08_22005 PF00392 Bacterial regulatory proteins, gntR family ITG08_22005 PF07702 UTRA domain ITG08_22010 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_22015 PF00005 ABC transporter ITG08_22020 PF01266 FAD dependent oxidoreductase ITG08_22030 PF00266 Aminotransferase class-V ITG08_22035 PF00202 Aminotransferase class-III ITG08_22040 PF13419 Haloacid dehalogenase-like hydrolase ITG08_22045 PF13488 Glycine zipper ITG08_22045 PF00691 OmpA family ITG08_22050 PF02566 OsmC-like protein ITG08_22055 PF01625 Peptide methionine sulfoxide reductase ITG08_22055 PF01641 SelR domain ITG08_22060 PF02386 Cation transport protein ITG08_22065 PF02254 TrkA-N domain ITG08_22065 PF02080 TrkA-C domain ITG08_22070 PF00924 Mechanosensitive ion channel ITG08_22075 PF01050 Mannose-6-phosphate isomerase ITG08_22075 PF00483 Nucleotidyl transferase ITG08_22080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ITG08_22080 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ITG08_22080 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ITG08_22080 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ITG08_22085 PF00793 DAHP synthetase I family ITG08_22090 PF00563 EAL domain ITG08_22090 PF03707 Bacterial signalling protein N terminal repeat ITG08_22090 PF00990 Diguanylate cyclase, GGDEF domain ITG08_22100 PF12843 Putative quorum-sensing-regulated virulence factor ITG08_22115 PF01040 UbiA prenyltransferase family ITG08_22120 PF02628 Cytochrome oxidase assembly protein ITG08_22140 PF00510 Cytochrome c oxidase subunit III ITG08_22145 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 ITG08_22150 PF00115 Cytochrome C and Quinol oxidase polypeptide I ITG08_22155 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ITG08_22155 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ITG08_22160 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ITG08_22160 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ITG08_22160 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ITG08_22160 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ITG08_22165 PF01810 LysE type translocator ITG08_22170 PF01557 Fumarylacetoacetate (FAA) hydrolase family ITG08_22180 PF00012 Hsp70 protein ITG08_22200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_22200 PF00512 His Kinase A (phospho-acceptor) domain ITG08_22200 PF09308 LuxQ, periplasmic ITG08_22200 PF00072 Response regulator receiver domain ITG08_22205 PF13407 Periplasmic binding protein domain ITG08_22210 PF01541 GIY-YIG catalytic domain ITG08_22215 PF04337 Protein of unknown function, DUF480 ITG08_22225 PF04363 Protein of unknown function (DUF496) ITG08_22240 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ITG08_22240 PF00072 Response regulator receiver domain ITG08_22240 PF00672 HAMP domain ITG08_22240 PF00512 His Kinase A (phospho-acceptor) domain ITG08_22240 PF01627 Hpt domain ITG08_22240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_22245 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ITG08_22245 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ITG08_22250 PF00970 Oxidoreductase FAD-binding domain ITG08_22250 PF00175 Oxidoreductase NAD-binding domain ITG08_22250 PF00111 2Fe-2S iron-sulfur cluster binding domain ITG08_22255 PF03063 Prismane/CO dehydrogenase family ITG08_22270 PF01810 LysE type translocator ITG08_22275 PF03466 LysR substrate binding domain ITG08_22275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG08_22285 PF13520 Amino acid permease ITG08_22290 PF00155 Aminotransferase class I and II ITG08_22290 PF00392 Bacterial regulatory proteins, gntR family ITG08_22300 PF03253 Urea transporter ITG08_22305 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ITG08_22305 PF12833 Helix-turn-helix domain ITG08_22320 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ITG08_22325 PF07969 Amidohydrolase family ITG08_22330 PF00313 'Cold-shock' DNA-binding domain ITG08_22335 PF00990 Diguanylate cyclase, GGDEF domain ITG08_22350 PF00271 Helicase conserved C-terminal domain ITG08_22350 PF00270 DEAD/DEAH box helicase ITG08_22355 PF00563 EAL domain ITG08_22355 PF00990 Diguanylate cyclase, GGDEF domain ITG08_22355 PF03707 Bacterial signalling protein N terminal repeat ITG08_22370 PF00512 His Kinase A (phospho-acceptor) domain ITG08_22370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_22370 PF08521 Two-component sensor kinase N-terminal ITG08_22375 PF00072 Response regulator receiver domain ITG08_22375 PF00486 Transcriptional regulatory protein, C terminal ITG08_22380 PF00873 AcrB/AcrD/AcrF family ITG08_22390 PF02321 Outer membrane efflux protein ITG08_22400 PF01773 Na+ dependent nucleoside transporter N-terminus ITG08_22400 PF07662 Na+ dependent nucleoside transporter C-terminus ITG08_22400 PF07670 Nucleoside recognition ITG08_22415 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ITG08_22420 PF03611 PTS system sugar-specific permease component ITG08_22425 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ITG08_22430 PF01966 HD domain ITG08_22435 PF13302 Acetyltransferase (GNAT) domain ITG08_22440 PF16527 Two-component sensor protein CpxA, periplasmic domain ITG08_22440 PF00512 His Kinase A (phospho-acceptor) domain ITG08_22440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG08_22440 PF00672 HAMP domain ITG08_22445 PF00072 Response regulator receiver domain ITG08_22445 PF00486 Transcriptional regulatory protein, C terminal ITG08_22455 PF13426 PAS domain ITG08_22455 PF00563 EAL domain ITG08_22455 PF00990 Diguanylate cyclase, GGDEF domain ITG08_22460 PF00990 Diguanylate cyclase, GGDEF domain ITG08_22460 PF00563 EAL domain ITG08_22460 PF08447 PAS fold ITG08_22460 PF08448 PAS fold ITG08_22470 PF00005 ABC transporter ITG08_22490 PF01872 RibD C-terminal domain ITG08_22490 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ITG08_22500 PF00849 RNA pseudouridylate synthase ITG08_22510 PF07690 Major Facilitator Superfamily ITG08_22515 PF02311 AraC-like ligand binding domain ITG08_22515 PF12833 Helix-turn-helix domain ITG08_22520 PF00857 Isochorismatase family ITG08_22550 PF12706 Beta-lactamase superfamily domain ITG08_22555 PF12793 Sugar transport-related sRNA regulator N-term ITG08_22555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ITG08_22560 PF08443 RimK-like ATP-grasp domain ITG08_22560 PF18030 RimK PreATP-grasp domain ITG08_22565 PF08443 RimK-like ATP-grasp domain ITG08_22565 PF18030 RimK PreATP-grasp domain ITG08_22580 PF13416 Bacterial extracellular solute-binding protein ITG08_22585 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_22590 PF00528 Binding-protein-dependent transport system inner membrane component ITG08_22595 PF00005 ABC transporter ITG08_22595 PF17912 MalK OB fold domain ITG08_22600 PF03009 Glycerophosphoryl diester phosphodiesterase family ITG08_22620 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ITG08_22630 PF04399 Glutaredoxin 2, C terminal domain ITG08_22630 PF13417 Glutathione S-transferase, N-terminal domain ITG08_22635 PF03618 Kinase/pyrophosphorylase ITG08_22640 PF00391 PEP-utilising enzyme, mobile domain ITG08_22640 PF02896 PEP-utilising enzyme, TIM barrel domain ITG08_22640 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ITG08_22650 PF00144 Beta-lactamase ITG08_22655 PF01965 DJ-1/PfpI family ITG08_22655 PF12833 Helix-turn-helix domain ITG08_22660 PF01554 MatE ITG08_22715 PF00817 impB/mucB/samB family ITG08_22715 PF11798 IMS family HHH motif ITG08_22715 PF13438 Domain of unknown function (DUF4113) ITG08_22715 PF11799 impB/mucB/samB family C-terminal domain ITG08_22730 PF13614 AAA domain ITG08_22735 PF08775 ParB family ITG08_22735 PF02195 ParB-like nuclease domain ITG08_22775 PF02796 Helix-turn-helix domain of resolvase ITG08_22775 PF00239 Resolvase, N terminal domain ITG08_22790 PF02796 Helix-turn-helix domain of resolvase ITG08_22790 PF00239 Resolvase, N terminal domain ITG08_22805 PF00580 UvrD/REP helicase N-terminal domain ITG08_22805 PF13361 UvrD-like helicase C-terminal domain ITG08_22820 PF00145 C-5 cytosine-specific DNA methylase ITG08_22840 PF00717 Peptidase S24-like