locus-tag	class	description
FQ332_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
FQ332_00010	COG0592	DNA-directed DNA polymerase activity
FQ332_00020	COG0187	DNA topoisomerase II activity
FQ332_00035	COG0071	Belongs to the small heat shock protein (HSP20) family
FQ332_00040	COG3977	Valine--pyruvate aminotransferase
FQ332_00045	COG0366	Alpha amylase catalytic
FQ332_00060	COG2119	membrane
FQ332_00070	COG0425	Belongs to the sulfur carrier protein TusA family
FQ332_00085	COG0604	alcohol dehydrogenase
FQ332_00090	COG0183	Belongs to the thiolase family
FQ332_00100	COG1739	Uncharacterized protein family UPF0029
FQ332_00105	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FQ332_00150	COG0583	DNA-binding transcription factor activity
FQ332_00155	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
FQ332_00160	COG2960	long-chain fatty acid transporting porin activity
FQ332_00165	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FQ332_00170	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FQ332_00230	COG4166	transmembrane transport
FQ332_00240	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FQ332_00285	COG1609	Transcriptional regulator
FQ332_00290	COG0583	DNA-binding transcription factor activity
FQ332_00305	COG0129	dihydroxy-acid dehydratase activity
FQ332_00310	COG3265	gluconokinase activity
FQ332_00315	COG2610	gluconate transmembrane transporter activity
FQ332_00320	COG0800	Aldolase
FQ332_00325	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
FQ332_00330	COG0583	DNA-binding transcription factor activity
FQ332_00335	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FQ332_00340	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FQ332_00350	COG1522	sequence-specific DNA binding
FQ332_00355	COG5002	protein histidine kinase activity
FQ332_00355	COG5001	Diguanylate cyclase
FQ332_00360	COG0742	ribosomal rna small subunit methyltransferase
FQ332_00375	COG0589	response to stress
FQ332_00380	COG1528	Iron-storage protein
FQ332_00390	COG2081	HI0933 family
FQ332_00420	COG1597	lipid kinase activity
FQ332_00450	COG0628	permease
FQ332_00465	COG1322	Protein conserved in bacteria
FQ332_00470	COG2226	methyltransferase
FQ332_00475	COG3165	ubiquinone biosynthetic process from chorismate
FQ332_00480	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FQ332_00490	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FQ332_00495	COG0805	protein transport
FQ332_00505	COG0084	hydrolase, TatD family'
FQ332_00520	COG0456	acetyltransferase
FQ332_00530	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FQ332_00530	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FQ332_00535	COG0218	Necessary for normal cell division and for the maintenance of normal septation
FQ332_00570	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FQ332_00580	COG2204	response regulator
FQ332_00585	COG3852	Histidine kinase
FQ332_00595	COG0174	glutamine synthetase
FQ332_00615	COG1295	ribonuclease BN
FQ332_00620	COG1490	D-aminoacyl-tRNA deacylase activity
FQ332_00625	COG0456	acetyltransferase
FQ332_00635	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
FQ332_00640	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
FQ332_00645	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
FQ332_00650	COG3031	protein transport across the cell outer membrane
FQ332_00660	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FQ332_00665	COG1459	type II secretion system
FQ332_00670	COG2165	general secretion pathway protein
FQ332_00675	COG2165	general secretion pathway protein
FQ332_00680	COG2165	general secretion pathway protein
FQ332_00685	COG4795	General secretion pathway protein
FQ332_00690	COG3156	type II secretion system protein K
FQ332_00695	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FQ332_00700	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FQ332_00710	COG1218	3'(2'),5'-bisphosphate nucleotidase
FQ332_00715	COG0494	nUDIX hydrolase
FQ332_00725	COG1040	competence protein
FQ332_00740	COG2183	response to ionizing radiation
FQ332_00750	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FQ332_00760	COG0745	RESPONSE REGULATOR receiver
FQ332_00765	COG2205	protein histidine kinase activity
FQ332_00770	COG2233	PERMEase
FQ332_00775	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FQ332_00780	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FQ332_00785	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FQ332_00790	COG1758	RNA polymerase activity
FQ332_00795	COG0194	GDP metabolic process
FQ332_00810	COG0848	biopolymer transport protein
FQ332_00815	COG0811	peptide transport
FQ332_00840	COG4174	ABC transporter (Permease)
FQ332_00845	COG4239	(ABC) transporter, permease
FQ332_00850	COG0747	negative chemotaxis
FQ332_00855	COG0444	Belongs to the ABC transporter superfamily
FQ332_00860	COG4608	Belongs to the ABC transporter superfamily
FQ332_00870	COG1561	YicC-like family, N-terminal region
FQ332_00875	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
FQ332_00890	COG1560	Kdo2-lipid A biosynthetic process
FQ332_00895	COG1309	transcriptional regulator
FQ332_00900	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FQ332_00910	COG2003	Belongs to the UPF0758 family
FQ332_00955	COG0463	Glycosyl transferase, family 2
FQ332_00960	COG0859	PFAM glycosyl transferase family 9
FQ332_00965	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FQ332_00970	COG3642	lipopolysaccharide core region biosynthetic process
FQ332_00990	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FQ332_01005	COG1519	Transferase
FQ332_01010	COG0859	PFAM glycosyl transferase family 9
FQ332_01015	COG1560	Kdo2-lipid A biosynthetic process
FQ332_01025	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FQ332_01060	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FQ332_01065	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FQ332_01075	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FQ332_01080	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FQ332_01085	COG2089	acid synthase
FQ332_01095	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FQ332_01100	COG1083	cytidylyl-transferase
FQ332_01140	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FQ332_01145	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
FQ332_01150	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FQ332_01155	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FQ332_01160	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FQ332_01190	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FQ332_01200	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FQ332_01225	COG0149	triose-phosphate isomerase activity
FQ332_01255	COG1494	fructose-1,6-bisphosphatase
FQ332_01265	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FQ332_01270	COG1575	Belongs to the MenA family. Type 1 subfamily
FQ332_01275	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
FQ332_01280	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
FQ332_01290	COG1609	Transcriptional regulator
FQ332_01295	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FQ332_01305	COG0254	rRNA binding
FQ332_01315	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
FQ332_01320	COG0088	Forms part of the polypeptide exit tunnel
FQ332_01330	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
FQ332_01335	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
FQ332_01340	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
FQ332_01345	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
FQ332_01355	COG0255	Belongs to the universal ribosomal protein uL29 family
FQ332_01360	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
FQ332_01370	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
FQ332_01375	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
FQ332_01385	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
FQ332_01390	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
FQ332_01405	COG1841	ribosomal large subunit assembly
FQ332_01415	COG0201	protein transport
FQ332_01420	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FQ332_01425	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
FQ332_01430	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
FQ332_01440	COG0202	RNA polymerase activity
FQ332_01445	COG0203	ribosomal protein L17
FQ332_01455	COG0545	Peptidyl-prolyl cis-trans isomerase
FQ332_01465	COG2153	protein acetylation
FQ332_01470	COG0513	Belongs to the DEAD box helicase family
FQ332_01485	COG1648	precorrin-2 dehydrogenase activity
FQ332_01485	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FQ332_01490	COG0175	sulfate reduction
FQ332_01495	COG2895	sulfate adenylyltransferase (ATP) activity
FQ332_01500	COG0471	metal ion transport
FQ332_01500	COG3273	potassium ion transport
FQ332_01505	COG0529	Catalyzes the synthesis of activated sulfate
FQ332_01525	COG4181	ATPase activity
FQ332_01540	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
FQ332_01550	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FQ332_01555	COG0729	surface antigen
FQ332_01560	COG2911	Protein conserved in bacteria
FQ332_01565	COG2105	PFAM AIG2 family protein
FQ332_01575	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
FQ332_01580	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
FQ332_01590	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FQ332_01595	COG0163	prenyltransferase activity
FQ332_01600	COG4143	(ABC) transporter
FQ332_01605	COG1178	ABC-type Fe3 transport system permease component
FQ332_01610	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
FQ332_01615	COG0583	DNA-binding transcription factor activity
FQ332_01620	COG1902	pentaerythritol trinitrate reductase activity
FQ332_01635	COG2358	TRAP transporter, solute receptor (TAXI family
FQ332_01660	COG0142	geranyltranstransferase activity
FQ332_01665	COG0261	This protein binds to 23S rRNA in the presence of protein L20
FQ332_01675	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
FQ332_01680	COG2966	Psort location CytoplasmicMembrane, score
FQ332_01695	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FQ332_01700	COG2967	ApaG domain
FQ332_01705	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
FQ332_01710	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FQ332_01715	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FQ332_01720	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FQ332_01725	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FQ332_01745	COG0473	3-isopropylmalate dehydrogenase activity
FQ332_01750	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FQ332_01775	COG0583	DNA-binding transcription factor activity
FQ332_01780	COG1022	Amp-dependent synthetase and ligase
FQ332_01785	COG0028	Belongs to the TPP enzyme family
FQ332_01790	COG0440	acetolactate synthase activity
FQ332_01795	COG3706	GGDEF domain
FQ332_01805	COG0469	pyruvate kinase activity
FQ332_01810	COG1349	DNA-binding transcription factor activity
FQ332_01815	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FQ332_01825	COG2376	Dihydroxyacetone kinase
FQ332_01830	COG1461	Dihydroxyacetone kinase
FQ332_01845	COG3722	fumarate hydratase activity
FQ332_01855	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FQ332_01855	COG2213	PTS system mannitol-specific
FQ332_01890	COG0358	DNA primase activity
FQ332_01895	COG1610	YqeY-like protein
FQ332_01900	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FQ332_01905	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
FQ332_01910	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FQ332_01915	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
FQ332_01920	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FQ332_01925	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FQ332_01930	COG1968	undecaprenyl-diphosphatase activity
FQ332_01940	COG3267	Type II secretory pathway component ExeA
FQ332_01940	COG3409	Peptidoglycan-binding domain 1 protein
FQ332_01950	COG0405	Gamma-glutamyltransferase
FQ332_01955	COG4991	sh3 domain protein
FQ332_01960	COG0306	phosphate transporter
FQ332_01965	COG1392	Phosphate transport regulator
FQ332_01970	COG3025	triphosphatase activity
FQ332_01985	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
FQ332_01990	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
FQ332_01990	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
FQ332_01995	COG1538	Outer membrane efflux protein
FQ332_02000	COG0494	nUDIX hydrolase
FQ332_02005	COG3151	Protein conserved in bacteria
FQ332_02015	COG3150	esterase
FQ332_02025	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FQ332_02030	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FQ332_02040	COG3105	Protein conserved in bacteria
FQ332_02050	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FQ332_02065	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
FQ332_02070	COG0723	plastoquinol--plastocyanin reductase activity
FQ332_02075	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FQ332_02080	COG2857	Cytochrome c1
FQ332_02085	COG0625	glutathione transferase activity
FQ332_02090	COG2969	positive regulation of protein catabolic process
FQ332_02095	COG2823	Periplasmic or secreted lipoprotein
FQ332_02100	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FQ332_02115	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
FQ332_02135	COG3116	cell division
FQ332_02140	COG0768	penicillin binding
FQ332_02145	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FQ332_02150	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FQ332_02155	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FQ332_02160	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
FQ332_02165	COG0772	Belongs to the SEDS family
FQ332_02180	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FQ332_02185	COG0849	cell division
FQ332_02190	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FQ332_02195	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
FQ332_02205	COG0653	protein targeting
FQ332_02210	COG0494	nUDIX hydrolase
FQ332_02220	COG0505	Belongs to the CarA family
FQ332_02225	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FQ332_02240	COG0730	response to heat
FQ332_02245	COG0583	DNA-binding transcription factor activity
FQ332_02250	COG2860	membrane
FQ332_02265	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FQ332_02275	COG0493	'glutamate synthase
FQ332_02280	COG0069	glutamate synthase activity
FQ332_02280	COG0070	glutamate synthase
FQ332_02280	COG0067	glutamate synthase
FQ332_02290	COG0070	glutamate synthase
FQ332_02290	COG0069	glutamate synthase activity
FQ332_02290	COG0067	glutamate synthase
FQ332_02295	COG1242	4 iron, 4 sulfur cluster binding
FQ332_02300	COG2203	Gaf domain
FQ332_02300	COG3706	GGDEF domain
FQ332_02300	COG4251	negative regulation of phosphorylation
FQ332_02300	COG5001	Diguanylate cyclase
FQ332_02305	COG5002	protein histidine kinase activity
FQ332_02305	COG2198	Histidine kinase
FQ332_02305	COG0784	Response regulator, receiver
FQ332_02315	COG0745	RESPONSE REGULATOR receiver
FQ332_02330	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FQ332_02350	COG0083	homoserine kinase activity
FQ332_02355	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
FQ332_02365	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
FQ332_02370	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
FQ332_02380	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
FQ332_02395	COG1115	amino acid carrier protein
FQ332_02400	COG3022	response to hydroperoxide
FQ332_02405	COG0513	Belongs to the DEAD box helicase family
FQ332_02410	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
FQ332_02420	COG0716	FMN binding
FQ332_02425	COG4974	Belongs to the 'phage' integrase family
FQ332_02430	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FQ332_02435	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FQ332_02450	COG2204	response regulator
FQ332_02460	COG0667	Aldo Keto reductase
FQ332_02490	COG0730	response to heat
FQ332_02500	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
FQ332_02510	COG1283	sodium-dependent phosphate transmembrane transporter activity
FQ332_02515	COG0583	DNA-binding transcription factor activity
FQ332_02520	COG0640	Transcriptional regulator
FQ332_02525	COG0268	Binds directly to 16S ribosomal RNA
FQ332_02530	COG0728	peptidoglycan biosynthetic process
FQ332_02535	COG0196	riboflavin kinase activity
FQ332_02550	COG1047	Peptidyl-prolyl cis-trans
FQ332_02555	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
FQ332_02565	COG3279	Response regulator of the LytR AlgR family
FQ332_02570	COG3275	phosphorelay sensor kinase activity
FQ332_02575	COG1966	Carbon starvation protein
FQ332_02595	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
FQ332_02600	COG1472	Belongs to the glycosyl hydrolase 3 family
FQ332_02605	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FQ332_02610	COG0287	Prephenate dehydrogenase
FQ332_02610	COG1605	Chorismate mutase
FQ332_02615	COG0739	heme binding
FQ332_02625	COG0488	(ABC) transporter
FQ332_02635	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
FQ332_02640	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
FQ332_02645	COG1605	Chorismate mutase
FQ332_02645	COG0077	Prephenate dehydratase
FQ332_02650	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FQ332_02660	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FQ332_02665	COG0564	pseudouridine synthase activity
FQ332_02675	COG0542	response to heat
FQ332_02735	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FQ332_02745	COG2974	May be involved in recombination
FQ332_02750	COG0745	RESPONSE REGULATOR receiver
FQ332_02755	COG5002	protein histidine kinase activity
FQ332_02765	COG0248	Ppx GppA phosphatase
FQ332_02770	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
FQ332_02775	COG0573	inorganic phosphate transmembrane transporter activity
FQ332_02780	COG0581	inorganic phosphate transmembrane transporter activity
FQ332_02785	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FQ332_02790	COG0704	Plays a role in the regulation of phosphate uptake
FQ332_02800	COG3142	Participates in the control of copper homeostasis
FQ332_02805	COG0450	alkyl hydroperoxide reductase
FQ332_02810	COG0583	DNA-binding transcription factor activity
FQ332_02820	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FQ332_02830	COG0517	IMP dehydrogenase activity
FQ332_02840	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
FQ332_02850	COG1862	Preprotein translocase
FQ332_02855	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FQ332_02860	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FQ332_02865	COG0483	inositol monophosphate 1-phosphatase activity
FQ332_02870	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
FQ332_02880	COG1104	cysteine desulfurase activity
FQ332_02885	COG0822	iron-sulfur transferase activity
FQ332_02900	COG0443	Heat shock 70 kDa protein
FQ332_02905	COG0633	Ferredoxin
FQ332_02910	COG2975	iron-sulfur cluster assembly
FQ332_02920	COG0105	UTP biosynthetic process
FQ332_02935	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
FQ332_02940	COG0124	histidyl-tRNA synthetase
FQ332_02945	COG2976	Protein conserved in bacteria
FQ332_02950	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FQ332_02955	COG1160	GTP binding
FQ332_02975	COG0517	IMP dehydrogenase activity
FQ332_02975	COG0516	GMP reductase activity
FQ332_02985	COG1757	Na H antiporter
FQ332_02995	COG1584	GPR1 FUN34 yaaH family protein
FQ332_03000	COG1115	amino acid carrier protein
FQ332_03015	COG2873	o-acetylhomoserine
FQ332_03020	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FQ332_03040	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FQ332_03040	COG3153	acetyltransferase
FQ332_03045	COG0583	DNA-binding transcription factor activity
FQ332_03085	COG0582	viral genome integration into host DNA
FQ332_03095	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
FQ332_03100	COG2867	negative regulation of translational initiation
FQ332_03105	COG2914	Belongs to the UPF0125 (RnfH) family
FQ332_03110	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FQ332_03120	COG0497	DNA recombination
FQ332_03130	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FQ332_03135	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FQ332_03140	COG1301	dicarboxylic acid transport
FQ332_03150	COG0484	heat shock protein binding
FQ332_03160	COG4969	Belongs to the N-Me-Phe pilin family
FQ332_03185	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
FQ332_03200	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
FQ332_03205	COG0047	phosphoribosylformylglycinamidine synthase activity
FQ332_03205	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FQ332_03235	COG2195	Cleaves the N-terminal amino acid of tripeptides
FQ332_03240	COG2252	PERMEase
FQ332_03245	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
FQ332_03260	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
FQ332_03265	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
FQ332_03270	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
FQ332_03275	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FQ332_03275	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FQ332_03290	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
FQ332_03300	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
FQ332_03305	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FQ332_03310	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
FQ332_03315	COG0142	geranyltranstransferase activity
FQ332_03320	COG1722	exodeoxyribonuclease VII activity
FQ332_03325	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FQ332_03335	COG0301	tRNA thio-modification
FQ332_03335	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FQ332_03340	COG0583	DNA-binding transcription factor activity
FQ332_03350	COG2363	Small membrane protein
FQ332_03360	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FQ332_03365	COG1611	Belongs to the LOG family
FQ332_03380	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FQ332_03380	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FQ332_03390	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
FQ332_03395	COG1464	Belongs to the NlpA lipoprotein family
FQ332_03400	COG2011	ABC-type metal ion transport system permease component
FQ332_03405	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FQ332_03410	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FQ332_03420	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FQ332_03420	COG1263	PTS System
FQ332_03425	COG0366	Alpha amylase catalytic
FQ332_03440	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FQ332_03445	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FQ332_03450	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
FQ332_03455	COG0321	lipoyl(octanoyl) transferase activity
FQ332_03465	COG1686	Belongs to the peptidase S11 family
FQ332_03470	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FQ332_03475	COG0772	Belongs to the SEDS family
FQ332_03480	COG0768	penicillin binding
FQ332_03485	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
FQ332_03490	COG0799	negative regulation of ribosome biogenesis
FQ332_03495	COG1466	dna polymerase III delta subunit
FQ332_03500	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
FQ332_03505	COG0495	leucyl-tRNA aminoacylation
FQ332_03510	COG2888	peptidyl-tyrosine sulfation
FQ332_03515	COG0815	Transfers the fatty acyl group on membrane lipoproteins
FQ332_03520	COG4535	Mg2 and Co2 transporter CorC
FQ332_03525	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
FQ332_03530	COG1702	phosphate starvation-inducible protein PhoH
FQ332_03535	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FQ332_03545	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FQ332_03655	COG0012	GTP binding
FQ332_03660	COG0193	aminoacyl-tRNA hydrolase activity
FQ332_03665	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FQ332_03670	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
FQ332_03675	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
FQ332_03680	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
FQ332_03690	COG2890	protein-(glutamine-N5) methyltransferase activity
FQ332_03695	COG3094	Invasion gene expression up-regulator, SirB
FQ332_03700	COG2912	Transglutaminase-like superfamily
FQ332_03705	COG2877	3-deoxy-8-phosphooctulonate synthase activity
FQ332_03710	COG0737	Belongs to the 5'-nucleotidase family
FQ332_03715	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FQ332_03720	COG1187	pseudouridine synthase activity
FQ332_03725	COG2840	Smr protein MutS2
FQ332_03765	COG2608	mercury ion transmembrane transporter activity
FQ332_03765	COG2217	Heavy metal translocating P-type atpase
FQ332_03780	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
FQ332_03835	COG0835	chemotaxis
FQ332_03835	COG0784	Response regulator, receiver
FQ332_03840	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FQ332_03845	COG1815	bacterial-type flagellum-dependent cell motility
FQ332_03850	COG1558	bacterial-type flagellum-dependent cell motility
FQ332_03860	COG1749	Flagellar hook protein flgE
FQ332_03865	COG4787	bacterial-type flagellum-dependent cell motility
FQ332_03875	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
FQ332_03880	COG1706	bacterial-type flagellum-dependent cell motility
FQ332_03885	COG1705	Flagellar rod assembly protein muramidase FlgJ
FQ332_03885	COG3951	Flagellar rod assembly protein muramidase FlgJ
FQ332_03895	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FQ332_03900	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FQ332_03910	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FQ332_03915	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FQ332_03920	COG2190	(PTS) system
FQ332_03925	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FQ332_03930	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FQ332_03940	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FQ332_03945	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
FQ332_03950	COG3115	cell septum assembly
FQ332_03955	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
FQ332_03970	COG0330	HflC and HflK could
FQ332_03975	COG2194	sulfuric ester hydrolase activity
FQ332_03995	COG1215	transferase activity, transferring glycosyl groups
FQ332_04000	COG1215	transferase activity, transferring glycosyl groups
FQ332_04005	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
FQ332_04015	COG3118	belongs to the thioredoxin family
FQ332_04025	COG0300	oxidoreductase activity
FQ332_04030	COG1090	epimerase
FQ332_04060	COG0622	Phosphoesterase
FQ332_04080	COG3710	Transcriptional regulator
FQ332_04085	COG0326	Molecular chaperone. Has ATPase activity
FQ332_04095	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
FQ332_04100	COG3104	oligopeptide transport
FQ332_04105	COG0250	Participates in transcription elongation, termination and antitermination
FQ332_04110	COG0367	asparagine synthase
FQ332_04115	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FQ332_04115	COG4651	solute:proton antiporter activity
FQ332_04120	COG1940	carbohydrate kinase activity
FQ332_04120	COG1846	Transcriptional regulator
FQ332_04125	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FQ332_04135	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FQ332_04135	COG1263	PTS System
FQ332_04135	COG2190	(PTS) system
FQ332_04140	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FQ332_04145	COG0735	belongs to the Fur family
FQ332_04155	COG0716	FMN binding
FQ332_04165	COG0596	Alpha beta hydrolase
FQ332_04170	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
FQ332_04175	COG0033	Phosphoglucomutase
FQ332_04185	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FQ332_04200	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
FQ332_04205	COG1053	succinate dehydrogenase
FQ332_04210	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FQ332_04215	COG0567	Dehydrogenase, E1 component
FQ332_04220	COG0508	dehydrogenase complex catalyzes the overall conversion of
FQ332_04225	COG0045	succinate-CoA ligase (ADP-forming) activity
FQ332_04235	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FQ332_04240	COG1121	(ABC) transporter
FQ332_04245	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
FQ332_04250	COG4977	sequence-specific DNA binding
FQ332_04255	COG1918	ferrous iron import across plasma membrane
FQ332_04280	COG0018	arginyl-trna synthetase
FQ332_04290	COG3102	Protein conserved in bacteria
FQ332_04305	COG0788	formyltetrahydrofolate deformylase activity
FQ332_04310	COG1199	ATP-dependent helicase activity
FQ332_04315	COG1214	PFAM Peptidase M22, glycoprotease
FQ332_04325	COG3065	identical protein binding
FQ332_04330	COG2267	carboxylic ester hydrolase activity
FQ332_04335	COG0318	PFAM AMP-dependent synthetase and ligase
FQ332_04340	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
FQ332_04345	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
FQ332_04350	COG2894	cell division
FQ332_04355	COG0850	regulation of cytokinetic process
FQ332_04360	COG3100	YcgL domain-containing protein
FQ332_04365	COG2951	lytic endotransglycosylase activity
FQ332_04375	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FQ332_04380	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
FQ332_04395	COG1028	Short-chain dehydrogenase reductase Sdr
FQ332_04405	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FQ332_04430	COG2986	histidine ammonia-lyase
FQ332_04435	COG1216	Glycosyl transferase, family 2
FQ332_04440	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FQ332_04455	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FQ332_04460	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FQ332_04495	COG0513	Belongs to the DEAD box helicase family
FQ332_04500	COG0569	domain protein
FQ332_04505	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FQ332_04520	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
FQ332_04525	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FQ332_04530	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FQ332_04535	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FQ332_04550	COG0544	peptidyl-prolyl cis-trans isomerase activity
FQ332_04560	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
FQ332_04565	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FQ332_04570	COG0776	regulation of translation
FQ332_04575	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FQ332_04580	COG1555	photosystem II stabilization
FQ332_04595	COG0232	Belongs to the dGTPase family. Type 2 subfamily
FQ332_04600	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
FQ332_04605	COG0436	Aminotransferase
FQ332_04610	COG1169	isochorismate synthase
FQ332_04615	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
FQ332_04625	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FQ332_04645	COG2855	membrane
FQ332_04650	COG0477	Major facilitator Superfamily
FQ332_04695	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FQ332_04700	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FQ332_04720	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FQ332_04725	COG1522	sequence-specific DNA binding
FQ332_04735	COG1946	Acyl-CoA thioesterase
FQ332_04740	COG3126	Type III secretion system lipoprotein chaperone (YscW)
FQ332_04755	COG3706	GGDEF domain
FQ332_04765	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FQ332_04770	COG0516	GMP reductase activity
FQ332_04770	COG0517	IMP dehydrogenase activity
FQ332_04795	COG0537	adenosine 5'-monophosphoramidase activity
FQ332_04820	COG3150	esterase
FQ332_04825	COG1252	NADH dehydrogenase
FQ332_04840	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FQ332_04850	COG4591	ABC-type transport system involved in lipoprotein release permease component
FQ332_04855	COG1136	(ABC) transporter
FQ332_04860	COG4591	ABC-type transport system involved in lipoprotein release permease component
FQ332_04870	COG2333	competence protein COMEC
FQ332_04870	COG0658	competence protein
FQ332_04875	COG1132	(ABC) transporter
FQ332_04895	COG2719	SpoVR family
FQ332_04900	COG2718	Belongs to the UPF0229 family
FQ332_04905	COG2766	serine protein kinase
FQ332_04910	COG3013	Belongs to the UPF0304 family
FQ332_04920	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FQ332_04930	COG1882	Formate acetyltransferase
FQ332_04975	COG0708	Exodeoxyribonuclease III
FQ332_04985	COG3923	Primosomal replication protein n
FQ332_04990	COG0730	response to heat
FQ332_04995	COG1199	ATP-dependent helicase activity
FQ332_05000	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FQ332_05005	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
FQ332_05010	COG1187	pseudouridine synthase activity
FQ332_05020	COG1278	Cold shock
FQ332_05025	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FQ332_05030	COG0542	response to heat
FQ332_05035	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FQ332_05040	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
FQ332_05045	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
FQ332_05065	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FQ332_05070	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FQ332_05075	COG0297	glycogen (starch) synthase activity
FQ332_05095	COG3070	regulator of competence-specific genes
FQ332_05100	COG1609	Transcriptional regulator
FQ332_05105	COG3381	protein complex oligomerization
FQ332_05110	COG0745	RESPONSE REGULATOR receiver
FQ332_05115	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FQ332_05120	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FQ332_05130	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
FQ332_05135	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
FQ332_05155	COG4067	protein conserved in archaea
FQ332_05155	COG0189	ligase activity
FQ332_05165	COG0500	methyltransferase
FQ332_05175	COG1801	Protein of unknown function DUF72
FQ332_05185	COG0217	transcriptional regulatory protein
FQ332_05190	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
FQ332_05195	COG0632	four-way junction helicase activity
FQ332_05200	COG2255	four-way junction helicase activity
FQ332_05205	COG1271	oxidase subunit
FQ332_05210	COG1294	oxidase, subunit
FQ332_05215	COG4890	Cyd operon protein YbgT
FQ332_05225	COG0824	Thioesterase
FQ332_05230	COG0811	peptide transport
FQ332_05245	COG0823	Involved in the tonB-independent uptake of proteins
FQ332_05250	COG2885	chlorophyll binding
FQ332_05255	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
FQ332_05260	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
FQ332_05270	COG3766	membrane
FQ332_05280	COG0754	glutathionylspermidine amidase activity
FQ332_05290	COG0784	Response regulator, receiver
FQ332_05290	COG5002	protein histidine kinase activity
FQ332_05320	COG0328	RNA-DNA hybrid ribonuclease activity
FQ332_05340	COG1294	oxidase, subunit
FQ332_05345	COG1271	oxidase subunit
FQ332_05360	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FQ332_05365	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FQ332_05390	COG3568	Endonuclease Exonuclease Phosphatase
FQ332_05415	COG0583	DNA-binding transcription factor activity
FQ332_05425	COG0686	Belongs to the AlaDH PNT family
FQ332_05435	COG1674	ftsk spoiiie
FQ332_05445	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FQ332_05465	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FQ332_05490	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FQ332_05510	COG0300	oxidoreductase activity
FQ332_05525	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FQ332_05535	COG2268	Band 7 protein
FQ332_05545	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FQ332_05550	COG2915	High frequency lysogenization protein hflD homolog
FQ332_05565	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FQ332_05590	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FQ332_05600	COG0131	Imidazoleglycerol-phosphate dehydratase
FQ332_05600	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FQ332_05605	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FQ332_05610	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
FQ332_05620	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
FQ332_05620	COG0140	phosphoribosyl-ATP diphosphatase activity
FQ332_05625	COG3012	SEC-C Motif Domain Protein
FQ332_05630	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
FQ332_05635	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FQ332_05640	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FQ332_05645	COG0215	cysteine-tRNA ligase activity
FQ332_05650	COG1435	thymidine kinase activity
FQ332_05680	COG2116	formate transmembrane transporter activity
FQ332_05690	COG0390	transport system, permease component
FQ332_05695	COG4459	periplasmic nitrate reductase
FQ332_05700	COG3005	denitrification pathway
FQ332_05705	COG0243	molybdopterin cofactor binding
FQ332_05720	COG1227	inorganic diphosphatase activity
FQ332_05730	COG4172	Belongs to the ABC transporter superfamily
FQ332_05740	COG4171	peptide transport system, permease
FQ332_05755	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
FQ332_05760	COG1842	Phage shock protein A
FQ332_05770	COG1983	PspC domain protein
FQ332_05790	COG2818	Glycosylase
FQ332_05795	COG5380	lipid catabolic process
FQ332_05800	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
FQ332_05805	COG0626	cystathionine gamma-synthase activity
FQ332_05815	COG0733	neurotransmitter:sodium symporter activity
FQ332_05820	COG0564	pseudouridine synthase activity
FQ332_05830	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FQ332_05835	COG1151	hydroxylamine reductase activity
FQ332_05840	COG3604	Transcriptional regulator
FQ332_05855	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FQ332_05860	COG4136	ATPase activity
FQ332_05865	COG4135	transport system, permease component
FQ332_05870	COG4134	Bacterial extracellular solute-binding protein
FQ332_05880	COG3313	Fe-S protein
FQ332_05905	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
FQ332_05910	COG2205	protein histidine kinase activity
FQ332_05915	COG0745	RESPONSE REGULATOR receiver
FQ332_05925	COG1061	Type III restriction enzyme res subunit
FQ332_05930	COG1187	pseudouridine synthase activity
FQ332_05935	COG2814	Major facilitator Superfamily
FQ332_05945	COG0702	epimerase
FQ332_05950	COG0534	Mate efflux family protein
FQ332_05970	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
FQ332_05980	COG1960	acyl-CoA dehydrogenase activity
FQ332_05985	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FQ332_05990	COG2985	domain, Protein
FQ332_05990	COG3273	potassium ion transport
FQ332_05995	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FQ332_06005	COG1737	Transcriptional regulator
FQ332_06010	COG0076	glutamate decarboxylase activity
FQ332_06020	COG2431	L-lysine efflux transmembrane transporter activity
FQ332_06035	COG3070	regulator of competence-specific genes
FQ332_06050	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FQ332_06050	COG4191	Histidine kinase
FQ332_06060	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
FQ332_06070	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FQ332_06075	COG4988	ABC transporter
FQ332_06080	COG0492	ferredoxin-NADP+ reductase activity
FQ332_06105	COG0471	metal ion transport
FQ332_06110	COG2949	membrane
FQ332_06115	COG0281	malic enzyme
FQ332_06120	COG1643	Atp-dependent helicase
FQ332_06135	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
FQ332_06170	COG0277	FAD linked oxidase domain protein
FQ332_06170	COG0247	lactate metabolic process
FQ332_06185	COG2986	histidine ammonia-lyase
FQ332_06190	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
FQ332_06195	COG0010	Belongs to the arginase family
FQ332_06200	COG1228	amidohydrolase
FQ332_06205	COG2188	Transcriptional regulator
FQ332_06220	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FQ332_06230	COG0291	Belongs to the bacterial ribosomal protein bL35 family
FQ332_06240	COG0393	Putative heavy-metal-binding
FQ332_06275	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
FQ332_06280	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FQ332_06280	COG0072	phenylalanine-tRNA ligase activity
FQ332_06290	COG0776	regulation of translation
FQ332_06300	COG0500	methyltransferase
FQ332_06305	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
FQ332_06310	COG0295	cytidine deaminase activity
FQ332_06315	COG1346	cytolysis
FQ332_06320	COG1380	Effector of murein hydrolase LrgA
FQ332_06325	COG2925	Exonuclease
FQ332_06335	COG0702	epimerase
FQ332_06340	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
FQ332_06345	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
FQ332_06365	COG2988	succinylglutamate desuccinylase activity
FQ332_06370	COG4139	cobalamin transport
FQ332_06375	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
FQ332_06395	COG0583	DNA-binding transcription factor activity
FQ332_06405	COG1451	nucleotide metabolic process
FQ332_06410	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
FQ332_06440	COG3938	Belongs to the proline racemase family
FQ332_06455	COG2423	ornithine cyclodeaminase activity
FQ332_06460	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FQ332_06465	COG3842	ATPase activity
FQ332_06470	COG1176	ABC-type spermidine putrescine transport system, permease component I
FQ332_06475	COG1177	transmembrane transport
FQ332_06490	COG3291	Pkd domain containing protein
FQ332_06510	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FQ332_06515	COG0601	transmembrane transport
FQ332_06525	COG2195	Cleaves the N-terminal amino acid of tripeptides
FQ332_06535	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
FQ332_06545	COG0625	glutathione transferase activity
FQ332_06590	COG3755	Protein conserved in bacteria
FQ332_06615	COG1742	UPF0060 membrane protein
FQ332_06630	COG1757	Na H antiporter
FQ332_06635	COG0174	glutamine synthetase
FQ332_06645	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
FQ332_06650	COG1396	sequence-specific DNA binding
FQ332_06650	COG1917	Cupin 2, conserved barrel domain protein
FQ332_06655	COG1012	belongs to the aldehyde dehydrogenase family
FQ332_06660	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FQ332_06670	COG2957	Belongs to the agmatine deiminase family
FQ332_06675	COG1012	belongs to the aldehyde dehydrogenase family
FQ332_06680	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FQ332_06685	COG2200	EAL domain
FQ332_06695	COG1846	Transcriptional regulator
FQ332_06700	COG2315	Protein conserved in bacteria
FQ332_06740	COG3063	Type IV pilus biogenesis stability protein PilW
FQ332_06745	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
FQ332_06760	COG1560	Kdo2-lipid A biosynthetic process
FQ332_06765	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
FQ332_06770	COG1280	lysine exporter protein (LysE YggA)
FQ332_06780	COG1115	amino acid carrier protein
FQ332_06805	COG1368	sulfuric ester hydrolase activity
FQ332_06810	COG2113	Glycine betaine
FQ332_06815	COG4176	ABC-type proline glycine betaine transport system permease component
FQ332_06820	COG4175	Glycine betaine
FQ332_06835	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FQ332_06840	COG0456	acetyltransferase
FQ332_06845	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FQ332_06850	COG0662	Cupin 2, conserved barrel domain protein
FQ332_06855	COG0527	aspartate kinase activity
FQ332_06860	COG3119	arylsulfatase activity
FQ332_06875	COG0641	radical SAM
FQ332_06890	COG3119	arylsulfatase activity
FQ332_06915	COG1538	Outer membrane efflux protein
FQ332_06930	COG1349	DNA-binding transcription factor activity
FQ332_06935	COG0673	inositol 2-dehydrogenase activity
FQ332_06940	COG4702	Belongs to the UPF0303 family
FQ332_06945	COG3706	GGDEF domain
FQ332_06965	COG0471	metal ion transport
FQ332_06980	COG5001	Diguanylate cyclase
FQ332_06980	COG3300	MHYT domain
FQ332_06995	COG1328	CTP reductase activity
FQ332_07000	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FQ332_07010	COG0861	Integral membrane protein TerC family
FQ332_07020	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FQ332_07030	COG0814	amino acid
FQ332_07045	COG1120	ATPase activity
FQ332_07050	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FQ332_07060	COG4774	siderophore transport
FQ332_07070	COG1132	(ABC) transporter
FQ332_07075	COG1132	(ABC) transporter
FQ332_07090	COG0583	DNA-binding transcription factor activity
FQ332_07115	COG0443	Heat shock 70 kDa protein
FQ332_07120	COG0443	Heat shock 70 kDa protein
FQ332_07165	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FQ332_07170	COG1643	Atp-dependent helicase
FQ332_07185	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FQ332_07195	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FQ332_07205	COG0438	transferase activity, transferring glycosyl groups
FQ332_07235	COG0438	transferase activity, transferring glycosyl groups
FQ332_07240	COG0438	transferase activity, transferring glycosyl groups
FQ332_07245	COG2204	response regulator
FQ332_07275	COG1793	dna ligase
FQ332_07285	COG0534	Mate efflux family protein
FQ332_07290	COG0307	riboflavin synthase, alpha
FQ332_07300	COG3001	Fructosamine kinase
FQ332_07310	COG3706	GGDEF domain
FQ332_07320	COG0791	NLP P60 protein
FQ332_07355	COG1940	carbohydrate kinase activity
FQ332_07365	COG0303	'Molybdopterin
FQ332_07370	COG0746	molybdenum cofactor guanylyltransferase activity
FQ332_07375	COG3842	ATPase activity
FQ332_07390	COG2204	response regulator
FQ332_07395	COG4191	Histidine kinase
FQ332_07405	COG0488	(ABC) transporter
FQ332_07410	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FQ332_07430	COG3381	protein complex oligomerization
FQ332_07440	COG0243	molybdopterin cofactor binding
FQ332_07440	COG3383	formate dehydrogenase (NAD+) activity
FQ332_07445	COG0437	4 iron, 4 sulfur cluster binding
FQ332_07475	COG0004	ammonium transporteR
FQ332_07480	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FQ332_07485	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FQ332_07495	COG1177	transmembrane transport
FQ332_07505	COG3842	ATPase activity
FQ332_07530	COG0589	response to stress
FQ332_07535	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FQ332_07550	COG2217	Heavy metal translocating P-type atpase
FQ332_07560	COG2010	Cytochrome c
FQ332_07575	COG3278	Belongs to the heme-copper respiratory oxidase family
FQ332_07590	COG2205	protein histidine kinase activity
FQ332_07590	COG0784	Response regulator, receiver
FQ332_07605	COG3120	sequence-specific DNA binding
FQ332_07610	COG1067	ATP-dependent peptidase activity
FQ332_07615	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FQ332_07640	COG0116	Belongs to the methyltransferase superfamily
FQ332_07640	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FQ332_07650	COG0167	dihydroorotate dehydrogenase activity
FQ332_07655	COG2902	Dehydrogenase
FQ332_07665	COG0308	aminopeptidase N
FQ332_07680	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
FQ332_07685	COG1956	GAF domain-containing protein
FQ332_07690	COG1132	(ABC) transporter
FQ332_07695	COG2995	paraquat-inducible protein a
FQ332_07700	COG3008	intermembrane lipid transfer
FQ332_07725	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FQ332_07730	COG1666	GTP binding
FQ332_07740	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FQ332_07745	COG4597	amino acid ABC transporter
FQ332_07750	COG0765	amino acid transport
FQ332_07755	COG1126	abc transporter atp-binding protein
FQ332_07760	COG0670	Belongs to the BI1 family
FQ332_07770	COG2920	part of a sulfur-relay system
FQ332_07775	COG1254	Belongs to the acylphosphatase family
FQ332_07850	COG2199	diguanylate cyclase activity
FQ332_07850	COG2203	Gaf domain
FQ332_07855	COG1414	Transcriptional regulator
FQ332_07865	COG0656	L-ascorbic acid biosynthetic process
FQ332_07870	COG0583	DNA-binding transcription factor activity
FQ332_07880	COG0583	DNA-binding transcription factor activity
FQ332_07885	COG2814	Major facilitator Superfamily
FQ332_07895	COG0604	alcohol dehydrogenase
FQ332_07905	COG1335	isochorismatase
FQ332_07910	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FQ332_07925	COG1410	methionine synthase
FQ332_07925	COG0646	methionine synthase
FQ332_07930	COG1126	abc transporter atp-binding protein
FQ332_07935	COG0765	amino acid transport
FQ332_07940	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FQ332_07955	COG0583	DNA-binding transcription factor activity
FQ332_07970	COG0583	DNA-binding transcription factor activity
FQ332_07975	COG0583	DNA-binding transcription factor activity
FQ332_07990	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
FQ332_07995	COG0602	queuosine metabolic process
FQ332_08000	COG0561	phosphatase activity
FQ332_08025	COG2828	Protein conserved in bacteria
FQ332_08035	COG0372	Belongs to the citrate synthase family
FQ332_08040	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
FQ332_08075	COG0730	response to heat
FQ332_08080	COG2358	TRAP transporter, solute receptor (TAXI family
FQ332_08095	COG0457	Tetratricopeptide repeat
FQ332_08165	COG4790	Type iii secretion
FQ332_08170	COG4794	Type iii secretion
FQ332_08175	COG4791	protein targeting
FQ332_08180	COG4792	protein secretion
FQ332_08185	COG2207	Transcriptional regulator
FQ332_08215	COG3177	Filamentation induced by cAMP protein fic
FQ332_08235	COG4669	(LipO)protein
FQ332_08305	COG1012	belongs to the aldehyde dehydrogenase family
FQ332_08310	COG3284	Transcriptional regulator
FQ332_08325	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
FQ332_08330	COG0363	glucosamine-6-phosphate deaminase activity
FQ332_08335	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FQ332_08340	COG2207	Transcriptional regulator
FQ332_08350	COG4565	transcriptional regulatory protein
FQ332_08355	COG3290	protein histidine kinase activity
FQ332_08370	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FQ332_08385	COG0583	DNA-binding transcription factor activity
FQ332_08400	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
FQ332_08410	COG2985	domain, Protein
FQ332_08435	COG2272	Belongs to the type-B carboxylesterase lipase family
FQ332_08440	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FQ332_08445	COG0729	surface antigen
FQ332_08455	COG1280	lysine exporter protein (LysE YggA)
FQ332_08460	COG1280	lysine exporter protein (LysE YggA)
FQ332_08465	COG5507	3-demethylubiquinone-9 3-methyltransferase
FQ332_08490	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FQ332_08495	COG0110	maltose O-acetyltransferase activity
FQ332_08845	COG1280	lysine exporter protein (LysE YggA)
FQ332_08930	COG0307	riboflavin synthase, alpha
FQ332_08995	COG0791	NLP P60 protein
FQ332_09120	COG0307	riboflavin synthase, alpha
FQ332_09565	COG1030	water channel activity
FQ332_09595	COG3772	lysozyme
FQ332_09655	COG1403	HNH endonuclease
FQ332_09675	COG1802	Transcriptional regulator
FQ332_09675	COG4626	Terminase
FQ332_09715	COG2815	serine threonine protein kinase
FQ332_09715	COG0515	serine threonine protein kinase
FQ332_09730	COG5532	Uncharacterized conserved protein (DUF2303)
FQ332_09750	COG0582	viral genome integration into host DNA
FQ332_09775	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FQ332_09785	COG3768	UPF0283 membrane protein
FQ332_09790	COG3106	COG3106 Predicted ATPase
FQ332_09810	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FQ332_09815	COG2205	protein histidine kinase activity
FQ332_09815	COG0784	Response regulator, receiver
FQ332_09825	COG0494	nUDIX hydrolase
FQ332_09830	COG0814	amino acid
FQ332_09835	COG1760	l-serine dehydratase
FQ332_09840	COG2200	EAL domain
FQ332_09850	COG0720	synthase
FQ332_09855	COG0840	transmembrane signaling receptor activity
FQ332_09860	COG0017	Asparaginyl-tRNA synthetase
FQ332_09870	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FQ332_09885	COG1448	Aminotransferase
FQ332_09905	COG0840	transmembrane signaling receptor activity
FQ332_09910	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FQ332_09940	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FQ332_09955	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FQ332_09960	COG3108	Peptidase M15
FQ332_09965	COG2989	Protein conserved in bacteria
FQ332_09990	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FQ332_10000	COG4235	cytochrome complex assembly
FQ332_10000	COG3088	subunit of a heme lyase
FQ332_10010	COG1138	Cytochrome C-type biogenesis protein
FQ332_10015	COG3301	Polysulphide reductase, NrfD
FQ332_10020	COG0437	4 iron, 4 sulfur cluster binding
FQ332_10030	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
FQ332_10050	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FQ332_10055	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FQ332_10085	COG0019	diaminopimelate decarboxylase activity
FQ332_10125	COG0322	excinuclease ABC activity
FQ332_10130	COG2197	response regulator
FQ332_10135	COG0417	DNA replication proofreading
FQ332_10155	COG1187	pseudouridine synthase activity
FQ332_10165	COG0009	L-threonylcarbamoyladenylate synthase
FQ332_10170	COG0613	PHP domain protein
FQ332_10180	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FQ332_10185	COG0512	Glutamine amidotransferase of anthranilate synthase
FQ332_10195	COG0135	phosphoribosylanthranilate isomerase activity
FQ332_10195	COG0134	indole-3-glycerol-phosphate synthase activity
FQ332_10205	COG0159	tryptophan synthase activity
FQ332_10210	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FQ332_10215	COG0318	PFAM AMP-dependent synthetase and ligase
FQ332_10220	COG1301	dicarboxylic acid transport
FQ332_10240	COG2917	probably involved in intracellular septation
FQ332_10250	COG2350	Protein conserved in bacteria
FQ332_10260	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FQ332_10265	COG0583	DNA-binding transcription factor activity
FQ332_10280	COG5001	Diguanylate cyclase
FQ332_10285	COG1032	radical SAM domain protein
FQ332_10310	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
FQ332_10315	COG0463	Glycosyl transferase, family 2
FQ332_10320	COG0745	RESPONSE REGULATOR receiver
FQ332_10325	COG3850	Histidine kinase
FQ332_10325	COG5002	protein histidine kinase activity
FQ332_10380	COG0577	efflux transmembrane transporter activity
FQ332_10380	COG1136	(ABC) transporter
FQ332_10385	COG0577	efflux transmembrane transporter activity
FQ332_10385	COG1136	(ABC) transporter
FQ332_10390	COG1136	(ABC) transporter
FQ332_10390	COG0577	efflux transmembrane transporter activity
FQ332_10415	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FQ332_10425	COG3118	belongs to the thioredoxin family
FQ332_10430	COG4232	protein-disulfide reductase activity
FQ332_10465	COG2863	cytochrome
FQ332_10470	COG3258	Cytochrome c
FQ332_10475	COG2995	paraquat-inducible protein a
FQ332_10480	COG3008	intermembrane lipid transfer
FQ332_10480	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FQ332_10500	COG4166	transmembrane transport
FQ332_10510	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
FQ332_10515	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
FQ332_10525	COG0539	negative regulation of cytoplasmic translation
FQ332_10530	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
FQ332_10535	COG0616	signal peptide processing
FQ332_10540	COG1028	Short-chain dehydrogenase reductase Sdr
FQ332_10555	COG0587	DNA-directed DNA polymerase activity
FQ332_10560	COG0784	Response regulator, receiver
FQ332_10560	COG0835	chemotaxis
FQ332_10565	COG1940	carbohydrate kinase activity
FQ332_10570	COG0469	pyruvate kinase activity
FQ332_10575	COG4667	esterase of the alpha-beta hydrolase superfamily
FQ332_10590	COG0733	neurotransmitter:sodium symporter activity
FQ332_10605	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FQ332_10605	COG1263	PTS System
FQ332_10610	COG0084	hydrolase, TatD family'
FQ332_10615	COG0470	DNA polymerase III
FQ332_10620	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FQ332_10625	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FQ332_10655	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FQ332_10660	COG0416	fatty acid biosynthetic process
FQ332_10670	COG1399	metal-binding, possibly nucleic acid-binding protein
FQ332_10675	COG0424	maF-like protein
FQ332_10680	COG0564	pseudouridine synthase activity
FQ332_10685	COG1530	ribonuclease E activity
FQ332_10690	COG0659	secondary active sulfate transmembrane transporter activity
FQ332_10695	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FQ332_10700	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
FQ332_10710	COG0572	uridine kinase
FQ332_10720	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FQ332_10720	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FQ332_10740	COG2186	Transcriptional regulator
FQ332_10745	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
FQ332_10750	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
FQ332_10755	COG3012	SEC-C Motif Domain Protein
FQ332_10755	COG3318	Belongs to the UPF0149 family
FQ332_10760	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FQ332_10765	COG3706	GGDEF domain
FQ332_10770	COG0366	Alpha amylase catalytic
FQ332_10775	COG1122	ATPase activity
FQ332_10780	COG4120	Belongs to the binding-protein-dependent transport system permease family
FQ332_10790	COG3092	negative regulation of chromosome organization
FQ332_10795	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FQ332_10800	COG0280	phosphate acetyltransferase
FQ332_10800	COG0857	belongs to the CobB CobQ family
FQ332_10810	COG0435	Glutathione S-transferase
FQ332_10820	COG0444	Belongs to the ABC transporter superfamily
FQ332_10825	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FQ332_10830	COG0601	transmembrane transport
FQ332_10840	COG0314	molybdopterin synthase activity
FQ332_10845	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
FQ332_10850	COG0315	cyclic pyranopterin monophosphate synthase activity
FQ332_10855	COG0521	Mo-molybdopterin cofactor biosynthetic process
FQ332_10860	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FQ332_10865	COG0391	Required for morphogenesis under gluconeogenic growth conditions
FQ332_10870	COG2198	Histidine kinase
FQ332_10875	COG2204	response regulator
FQ332_10880	COG0556	nucleotide-excision repair
FQ332_10890	COG1882	Formate acetyltransferase
FQ332_10895	COG4657	Part of a membrane complex involved in electron transport
FQ332_10900	COG2878	Part of a membrane complex involved in electron transport
FQ332_10905	COG4656	Part of a membrane complex involved in electron transport
FQ332_10910	COG4658	electron transport chain
FQ332_10915	COG4659	FMN binding
FQ332_10920	COG4660	Part of a membrane complex involved in electron transport
FQ332_10925	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FQ332_10930	COG0346	lactoylglutathione lyase activity
FQ332_10940	COG2885	chlorophyll binding
FQ332_10950	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FQ332_10955	COG2056	Na+-H+ antiporter family
FQ332_10965	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FQ332_10985	COG1454	alcohol dehydrogenase
FQ332_10985	COG1012	belongs to the aldehyde dehydrogenase family
FQ332_10990	COG2095	MarC family integral membrane protein
FQ332_10995	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FQ332_11000	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FQ332_11005	COG1757	Na H antiporter
FQ332_11020	COG3081	Nucleoid-associated protein
FQ332_11025	COG3082	Protein of unknown function (DUF1414)
FQ332_11040	COG0123	including yeast histone deacetylase and acetoin utilization protein
FQ332_11055	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FQ332_11060	COG0778	Nitroreductase
FQ332_11070	COG1902	pentaerythritol trinitrate reductase activity
FQ332_11070	COG0446	pyridine nucleotide-disulphide oxidoreductase
FQ332_11075	COG0616	signal peptide processing
FQ332_11080	COG0252	asparaginase activity
FQ332_11085	COG3139	Protein of unknown function (DUF1315)
FQ332_11095	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FQ332_11100	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FQ332_11115	COG2226	methyltransferase
FQ332_11135	COG1785	Belongs to the alkaline phosphatase family
FQ332_11145	COG0346	lactoylglutathione lyase activity
FQ332_11150	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
FQ332_11155	COG0668	transmembrane transport
FQ332_11160	COG2983	Belongs to the UPF0260 family
FQ332_11165	COG2261	transglycosylase associated protein
FQ332_11175	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FQ332_11180	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
FQ332_11195	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FQ332_11200	COG2832	Protein of unknown function (DUF454)
FQ332_11210	COG0745	RESPONSE REGULATOR receiver
FQ332_11215	COG0583	DNA-binding transcription factor activity
FQ332_11220	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
FQ332_11225	COG1286	toxin biosynthetic process
FQ332_11230	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
FQ332_11235	COG0285	dihydrofolate synthase activity
FQ332_11240	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
FQ332_11245	COG0101	tRNA pseudouridine synthase activity
FQ332_11255	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FQ332_11260	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FQ332_11265	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FQ332_11270	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
FQ332_11270	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FQ332_11275	COG0431	NADPH-dependent FMN reductase
FQ332_11290	COG3101	peptidyl-lysine hydroxylation
FQ332_11300	COG2860	membrane
FQ332_11305	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
FQ332_11310	COG2890	protein-(glutamine-N5) methyltransferase activity
FQ332_11315	COG2840	Smr protein MutS2
FQ332_11320	COG2062	phosphohistidine phosphatase, SixA
FQ332_11335	COG1024	Enoyl-CoA hydratase
FQ332_11335	COG1250	3-hydroxyacyl-CoA dehydrogenase
FQ332_11340	COG0183	Belongs to the thiolase family
FQ332_11360	COG2067	long-chain fatty acid transport protein
FQ332_11370	COG3088	subunit of a heme lyase
FQ332_11370	COG4235	cytochrome complex assembly
FQ332_11380	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FQ332_11385	COG1138	Cytochrome C-type biogenesis protein
FQ332_11390	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
FQ332_11395	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FQ332_11400	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FQ332_11405	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FQ332_11410	COG4133	protoheme IX ABC transporter activity
FQ332_11420	COG0835	chemotaxis
FQ332_11430	COG1192	Involved in chromosome partitioning
FQ332_11435	COG2201	protein-glutamate methylesterase activity
FQ332_11440	COG2198	Histidine kinase
FQ332_11440	COG0784	Response regulator, receiver
FQ332_11440	COG0643	Histidine kinase
FQ332_11445	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
FQ332_11485	COG1987	bacterial-type flagellum assembly
FQ332_11540	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FQ332_11550	COG1677	Flagellar hook-basal body complex protein FliE
FQ332_11560	COG4191	Histidine kinase
FQ332_11570	COG1516	flagellar protein fliS
FQ332_11580	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
FQ332_11585	COG1334	flagellar protein FlaG
FQ332_11590	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FQ332_11595	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FQ332_11605	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FQ332_11610	COG2837	iron assimilation
FQ332_11635	COG1393	Belongs to the ArsC family
FQ332_11640	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FQ332_11660	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FQ332_11670	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FQ332_11685	COG4783	chaperone-mediated protein folding
FQ332_11690	COG1393	Belongs to the ArsC family
FQ332_11710	COG2233	PERMEase
FQ332_11715	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
FQ332_11720	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
FQ332_11725	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FQ332_11730	COG0121	glutamine amidotransferase
FQ332_11735	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FQ332_11740	COG1960	acyl-CoA dehydrogenase activity
FQ332_11775	COG0328	RNA-DNA hybrid ribonuclease activity
FQ332_11780	COG2226	methyltransferase
FQ332_11785	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FQ332_11790	COG1388	LysM domain
FQ332_11790	COG0741	lytic transglycosylase activity
FQ332_11800	COG3021	interspecies interaction between organisms
FQ332_11805	COG0347	Belongs to the P(II) protein family
FQ332_11820	COG0825	malonyl-CoA metabolic process
FQ332_11825	COG0587	DNA-directed DNA polymerase activity
FQ332_11835	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FQ332_11840	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FQ332_11850	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FQ332_11855	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
FQ332_11865	COG0750	zinc metalloprotease
FQ332_11870	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FQ332_11875	COG0575	Belongs to the CDS family
FQ332_11880	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FQ332_11885	COG0233	cytoplasmic translational termination
FQ332_11890	COG0528	UMP kinase activity
FQ332_11895	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
FQ332_11900	COG0052	Belongs to the universal ribosomal protein uS2 family
FQ332_11905	COG0024	Methionine aminopeptidase
FQ332_11910	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
FQ332_11920	COG0564	pseudouridine synthase activity
FQ332_11925	COG3098	single-species biofilm formation
FQ332_11960	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FQ332_11985	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
FQ332_11995	COG0254	rRNA binding
FQ332_12000	COG1720	tRNA m6t6A37 methyltransferase activity
FQ332_12005	COG0442	prolyl-tRNA aminoacylation
FQ332_12025	COG0733	neurotransmitter:sodium symporter activity
FQ332_12045	COG0514	ATP-dependent DNA helicase (RecQ)
FQ332_12050	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FQ332_12070	COG1477	protein flavinylation
FQ332_12075	COG2871	sodium ion transport
FQ332_12080	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FQ332_12085	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FQ332_12090	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FQ332_12095	COG1805	sodium ion transport
FQ332_12100	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FQ332_12105	COG0271	Belongs to the BolA IbaG family
FQ332_12110	COG2813	Specifically methylates the guanine in position
FQ332_12115	COG3056	Lipoprotein
FQ332_12135	COG1595	DNA-templated transcription, initiation
FQ332_12155	COG3248	Nucleoside-binding outer membrane protein
FQ332_12160	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FQ332_12165	COG0693	protein deglycase activity
FQ332_12170	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FQ332_12175	COG3706	GGDEF domain
FQ332_12180	COG2166	iron-sulfur cluster assembly
FQ332_12185	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FQ332_12190	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
FQ332_12200	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
FQ332_12200	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FQ332_12220	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FQ332_12225	COG1074	ATP-dependent DNA helicase activity
FQ332_12230	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
FQ332_12250	COG3141	response to X-ray
FQ332_12265	COG2171	N-acyltransferase activity
FQ332_12270	COG0584	glycerophosphoryl diester phosphodiesterase
FQ332_12275	COG2271	Major facilitator Superfamily
FQ332_12285	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FQ332_12290	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FQ332_12295	COG1349	DNA-binding transcription factor activity
FQ332_12300	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FQ332_12305	COG0598	Magnesium transport protein CorA
FQ332_12325	COG1609	Transcriptional regulator
FQ332_12330	COG0583	DNA-binding transcription factor activity
FQ332_12390	COG4964	Belongs to the GSP D family
FQ332_12415	COG2169	Transcriptional regulator
FQ332_12420	COG1022	Amp-dependent synthetase and ligase
FQ332_12430	COG0583	DNA-binding transcription factor activity
FQ332_12435	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FQ332_12440	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
FQ332_12450	COG0560	Phosphoserine phosphatase
FQ332_12460	COG0813	purine-nucleoside phosphorylase activity
FQ332_12465	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
FQ332_12470	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
FQ332_12475	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
FQ332_12480	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FQ332_12485	COG0084	hydrolase, TatD family'
FQ332_12515	COG3153	acetyltransferase
FQ332_12520	COG3154	lipid carrier protein
FQ332_12530	COG0826	peptidase U32
FQ332_12535	COG0826	peptidase U32
FQ332_12540	COG0534	Mate efflux family protein
FQ332_12555	COG1185	polyribonucleotide nucleotidyltransferase activity
FQ332_12560	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
FQ332_12565	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FQ332_12570	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
FQ332_12575	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
FQ332_12580	COG0195	Participates in both transcription termination and antitermination
FQ332_12585	COG0779	Required for maturation of 30S ribosomal subunits
FQ332_12600	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FQ332_12610	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FQ332_12615	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FQ332_12620	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FQ332_12625	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
FQ332_12630	COG1534	Rna-binding protein
FQ332_12635	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FQ332_12640	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FQ332_12645	COG2027	D-alanyl-D-alanine carboxypeptidase
FQ332_12655	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FQ332_12660	COG0739	heme binding
FQ332_12685	COG0628	permease
FQ332_12695	COG0784	Response regulator, receiver
FQ332_12695	COG2205	protein histidine kinase activity
FQ332_12700	COG0747	negative chemotaxis
FQ332_12710	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FQ332_12715	COG0444	Belongs to the ABC transporter superfamily
FQ332_12720	COG4608	Belongs to the ABC transporter superfamily
FQ332_12730	COG2971	BadF BadG BcrA BcrD
FQ332_12745	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FQ332_12750	COG3842	ATPase activity
FQ332_12760	COG1840	ABC-type Fe3 transport system, periplasmic component
FQ332_12765	COG0004	ammonium transporteR
FQ332_12775	COG3112	Uncharacterised protein family (UPF0231)
FQ332_12780	COG1049	propionate catabolic process, 2-methylcitrate cycle
FQ332_12785	COG1752	Esterase of the alpha-beta hydrolase superfamily
FQ332_12790	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FQ332_12795	COG1643	Atp-dependent helicase
FQ332_12800	COG1489	DNA binding
FQ332_12810	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FQ332_12820	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FQ332_12825	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
FQ332_12830	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
FQ332_12835	COG1560	Kdo2-lipid A biosynthetic process
FQ332_12840	COG0842	Transport permease protein
FQ332_12845	COG1131	(ABC) transporter
FQ332_12850	COG0659	secondary active sulfate transmembrane transporter activity
FQ332_12855	COG0288	reversible hydration of carbon dioxide
FQ332_12870	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FQ332_12875	COG0508	dehydrogenase complex catalyzes the overall conversion of
FQ332_12880	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
FQ332_12885	COG2186	Transcriptional regulator
FQ332_12895	COG0157	Belongs to the NadC ModD family
FQ332_12905	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FQ332_12910	COG1459	type II secretion system
FQ332_12920	COG0237	dephospho-CoA kinase activity
FQ332_12925	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
FQ332_12930	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
FQ332_12945	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
FQ332_12950	COG0228	four-way junction DNA binding
FQ332_12955	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FQ332_12960	COG4137	Cytochrome C assembly protein
FQ332_12965	COG4536	flavin adenine dinucleotide binding
FQ332_12970	COG1854	S-ribosylhomocysteine lyase activity
FQ332_12985	COG0612	Peptidase, M16
FQ332_12990	COG1238	metal cluster binding
FQ332_13000	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
FQ332_13005	COG5016	pyruvate
FQ332_13005	COG0511	ligase activity, forming carbon-carbon bonds
FQ332_13010	COG3630	sodium ion export across plasma membrane
FQ332_13070	COG0527	aspartate kinase activity
FQ332_13075	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FQ332_13080	COG2137	regulation of response to DNA damage stimulus
FQ332_13090	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
FQ332_13095	COG1546	Belongs to the CinA family
FQ332_13100	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
FQ332_13105	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FQ332_13115	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FQ332_13120	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
FQ332_13130	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
FQ332_13135	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
FQ332_13140	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
FQ332_13145	COG0148	phosphopyruvate hydratase activity
FQ332_13150	COG0504	CTP synthase activity
FQ332_13155	COG3956	TIGRFAM MazG family protein
FQ332_13160	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FQ332_13170	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FQ332_13180	COG0736	holo-[acyl-carrier-protein] synthase activity
FQ332_13185	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FQ332_13190	COG1381	Involved in DNA repair and RecF pathway recombination
FQ332_13195	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FQ332_13205	COG0681	Belongs to the peptidase S26 family
FQ332_13210	COG0481	GTPase activity
FQ332_13215	COG3086	response to oxidative stress
FQ332_13230	COG1595	DNA-templated transcription, initiation
FQ332_13240	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FQ332_13250	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
FQ332_13270	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FQ332_13275	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FQ332_13280	COG3079	Belongs to the UPF0149 family
FQ332_13290	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
FQ332_13300	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FQ332_13305	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
FQ332_13310	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FQ332_13320	COG0583	DNA-binding transcription factor activity
FQ332_13335	COG0668	transmembrane transport
FQ332_13340	COG0191	fructose-bisphosphate aldolase activity
FQ332_13355	COG4771	TonB-dependent receptor
FQ332_13360	COG0583	DNA-binding transcription factor activity
FQ332_13365	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FQ332_13375	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
FQ332_13390	COG2356	endonuclease I
FQ332_13395	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FQ332_13400	COG0189	ligase activity
FQ332_13405	COG1678	Uncharacterized ACR, COG1678
FQ332_13410	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
FQ332_13425	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FQ332_13430	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FQ332_13435	COG0762	integral membrane protein
FQ332_13440	COG1872	DUF167
FQ332_13450	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FQ332_13455	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FQ332_13460	COG2066	Belongs to the glutaminase family
FQ332_13470	COG0220	tRNA (guanine-N7-)-methyltransferase activity
FQ332_13480	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
FQ332_13600	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FQ332_13610	COG3394	polysaccharide catabolic process
FQ332_13615	COG1486	melibiose metabolic process
FQ332_13620	COG1447	Phosphotransferase system cellobiose-specific component IIA
FQ332_13625	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FQ332_13635	COG0726	polysaccharide deacetylase
FQ332_13645	COG1028	Short-chain dehydrogenase reductase Sdr
FQ332_13660	COG0795	lipopolysaccharide-transporting ATPase activity
FQ332_13665	COG0795	lipopolysaccharide-transporting ATPase activity
FQ332_13670	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FQ332_13675	COG2927	DNA polymerase III (CHI subunit)
FQ332_13680	COG0525	valine-tRNA ligase activity
FQ332_13690	COG0456	acetyltransferase
FQ332_13715	COG0540	Belongs to the ATCase OTCase family
FQ332_13720	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
FQ332_13725	COG0251	oxidation-reduction process
FQ332_13730	COG0204	Acyl-transferase
FQ332_13735	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FQ332_13740	COG5007	Belongs to the BolA IbaG family
FQ332_13750	COG2854	intermembrane phospholipid transfer
FQ332_13755	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FQ332_13760	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FQ332_13765	COG1127	ABC transporter
FQ332_13775	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
FQ332_13775	COG0517	IMP dehydrogenase activity
FQ332_13785	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
FQ332_13790	COG1137	ATPase activity
FQ332_13800	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FQ332_13805	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FQ332_13810	COG1660	Displays ATPase and GTPase activities
FQ332_13815	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FQ332_13820	COG2239	Acts as a magnesium transporter
FQ332_13825	COG0312	modulator of DNA gyrase
FQ332_13830	COG3028	Belongs to the UPF0307 family
FQ332_13835	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FQ332_13840	COG0564	pseudouridine synthase activity
FQ332_13850	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FQ332_13855	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
FQ332_13860	COG0312	modulator of DNA gyrase
FQ332_13865	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FQ332_13870	COG3164	Protein of unknown function
FQ332_13875	COG1530	ribonuclease E activity
FQ332_13880	COG0424	maF-like protein
FQ332_13885	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
FQ332_13890	COG1792	Involved in formation and maintenance of cell shape
FQ332_13895	COG1077	Cell shape determining protein MreB Mrl
FQ332_13940	COG1459	type II secretion system
FQ332_13945	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FQ332_13955	COG3409	Peptidoglycan-binding domain 1 protein
FQ332_13955	COG3267	Type II secretory pathway component ExeA
FQ332_13960	COG1450	Type ii and iii secretion system protein
FQ332_13980	COG2200	EAL domain
FQ332_13980	COG2199	diguanylate cyclase activity
FQ332_13985	COG0629	single-stranded DNA binding
FQ332_14000	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FQ332_14010	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FQ332_14015	COG0527	aspartate kinase activity
FQ332_14020	COG0646	methionine synthase
FQ332_14020	COG1410	methionine synthase
FQ332_14080	COG0175	sulfate reduction
FQ332_14090	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
FQ332_14110	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FQ332_14115	COG0735	belongs to the Fur family
FQ332_14125	COG0166	Belongs to the GPI family
FQ332_14130	COG0432	Pfam Uncharacterised protein family UPF0047
FQ332_14135	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FQ332_14160	COG2965	DNA replication, synthesis of RNA primer
FQ332_14165	COG0360	Binds together with S18 to 16S ribosomal RNA
FQ332_14170	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FQ332_14175	COG0338	D12 class N6 adenine-specific DNA methyltransferase
FQ332_14185	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
FQ332_14190	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FQ332_14220	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FQ332_14230	COG0678	peroxiredoxin activity
FQ332_14230	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FQ332_14235	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FQ332_14245	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
FQ332_14245	COG0165	Argininosuccinate lyase
FQ332_14250	COG0137	argininosuccinate synthase activity
FQ332_14260	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FQ332_14270	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
FQ332_14280	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FQ332_14285	COG0460	homoserine dehydrogenase
FQ332_14285	COG0527	aspartate kinase activity
FQ332_14290	COG0626	cystathionine gamma-synthase activity
FQ332_14300	COG0281	malic enzyme
FQ332_14315	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FQ332_14320	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FQ332_14340	COG2923	Belongs to the DsrF TusC family
FQ332_14345	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
FQ332_14350	COG2964	Protein conserved in bacteria
FQ332_14355	COG0545	Peptidyl-prolyl cis-trans isomerase
FQ332_14370	COG1446	asparaginase
FQ332_14380	COG1047	Peptidyl-prolyl cis-trans
FQ332_14395	COG2249	NAD(P)H dehydrogenase (quinone) activity
FQ332_14400	COG0488	(ABC) transporter
FQ332_14410	COG0429	hydrolase of the alpha beta-hydrolase fold
FQ332_14420	COG3954	Phosphoribulokinase
FQ332_14425	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FQ332_14445	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FQ332_14450	COG0512	Glutamine amidotransferase of anthranilate synthase
FQ332_14465	COG0180	Tryptophanyl-tRNA synthetase
FQ332_14470	COG0546	phosphoglycolate phosphatase activity
FQ332_14475	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FQ332_14480	COG0557	exoribonuclease II activity
FQ332_14485	COG1959	2 iron, 2 sulfur cluster binding
FQ332_14490	COG1017	nitric oxide dioxygenase activity
FQ332_14490	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FQ332_14495	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
FQ332_14505	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
FQ332_14510	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
FQ332_14515	COG0330	HflC and HflK could
FQ332_14520	COG0330	HflC and HflK could
FQ332_14525	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FQ332_14535	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
FQ332_14540	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FQ332_14550	COG0802	atpase or kinase
FQ332_14555	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FQ332_14620	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
FQ332_14625	COG1162	GTPase activity
FQ332_14630	COG0688	phosphatidylethanolamine metabolic process
FQ332_14635	COG0471	metal ion transport
FQ332_14635	COG3273	potassium ion transport
FQ332_14645	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
FQ332_14650	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FQ332_14655	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
FQ332_14660	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
FQ332_14665	COG1045	serine acetyltransferase
FQ332_14670	COG4942	peptidase
FQ332_14690	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
FQ332_14695	COG1053	succinate dehydrogenase
FQ332_14700	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FQ332_14705	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
FQ332_14710	COG3080	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
FQ332_14725	COG1509	lysine 2,3-aminomutase activity
FQ332_14730	COG1285	pathogenesis
FQ332_14740	COG0459	protein refolding
FQ332_14750	COG0534	Mate efflux family protein
FQ332_14755	COG0205	6-phosphofructokinase activity
FQ332_14765	COG3678	ATP-independent chaperone mediated protein folding
FQ332_14770	COG0745	RESPONSE REGULATOR receiver
FQ332_14775	COG2205	protein histidine kinase activity
FQ332_14785	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FQ332_14790	COG3030	protein affecting phage T7 exclusion by the F plasmid
FQ332_14795	COG1027	Aspartate ammonia-lyase
FQ332_14800	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FQ332_14805	COG4232	protein-disulfide reductase activity
FQ332_14815	COG3263	regulation of cellular component size
FQ332_14825	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FQ332_14850	COG2814	Major facilitator Superfamily
FQ332_14865	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FQ332_14870	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FQ332_14875	COG0511	ligase activity, forming carbon-carbon bonds
FQ332_14880	COG0439	Biotin carboxylase
FQ332_14885	COG2264	protein methyltransferase activity
FQ332_14890	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FQ332_14895	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
FQ332_14905	COG0488	(ABC) transporter
FQ332_14965	COG1982	Orn Lys Arg decarboxylase major
FQ332_14970	COG0531	amino acid
FQ332_14980	COG3710	Transcriptional regulator
FQ332_14985	COG0789	Transcriptional regulator
FQ332_15000	COG0151	Belongs to the GarS family
FQ332_15015	COG1253	flavin adenine dinucleotide binding
FQ332_15020	COG3068	Protein conserved in bacteria
FQ332_15030	COG1573	uracil-dna glycosylase
FQ332_15035	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
FQ332_15040	COG2816	NAD+ diphosphatase activity
FQ332_15045	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
FQ332_15050	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
FQ332_15055	COG0085	RNA polymerase activity
FQ332_15060	COG0222	ribosome binding
FQ332_15065	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
FQ332_15080	COG0250	Participates in transcription elongation, termination and antitermination
FQ332_15085	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FQ332_15095	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FQ332_15125	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
FQ332_15125	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
FQ332_15130	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FQ332_15140	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FQ332_15205	COG4206	TonB-dependent receptor
FQ332_15225	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FQ332_15230	COG0534	Mate efflux family protein
FQ332_15235	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
FQ332_15240	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FQ332_15250	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
FQ332_15255	COG3161	chorismate lyase activity
FQ332_15260	COG1580	Controls the rotational direction of flagella during chemotaxis
FQ332_15265	COG0705	Rhomboid family
FQ332_15270	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FQ332_15280	COG2177	Part of the ABC transporter FtsEX involved in
FQ332_15285	COG2884	Cell division ATP-binding protein ftsE
FQ332_15290	COG0552	protein localization to endoplasmic reticulum
FQ332_15295	COG0742	ribosomal rna small subunit methyltransferase
FQ332_15305	COG2095	MarC family integral membrane protein
FQ332_15355	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FQ332_15360	COG0640	Transcriptional regulator
FQ332_15365	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
FQ332_15370	COG1280	lysine exporter protein (LysE YggA)
FQ332_15375	COG2267	carboxylic ester hydrolase activity
FQ332_15380	COG0561	phosphatase activity
FQ332_15400	COG2200	EAL domain
FQ332_15400	COG2199	diguanylate cyclase activity
FQ332_15400	COG3287	FIST C domain
FQ332_15405	COG1011	Hydrolase
FQ332_15410	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
FQ332_15425	COG0019	diaminopimelate decarboxylase activity
FQ332_15435	COG1965	Belongs to the frataxin family
FQ332_15440	COG3072	Adenylate cyclase
FQ332_15445	COG0181	hydroxymethylbilane synthase activity
FQ332_15450	COG1587	Uroporphyrinogen-III synthase
FQ332_15455	COG2959	enzyme of heme biosynthesis
FQ332_15460	COG3071	HemY protein
FQ332_15505	COG0633	Ferredoxin
FQ332_15510	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FQ332_15525	COG3118	belongs to the thioredoxin family
FQ332_15530	COG0513	Belongs to the DEAD box helicase family
FQ332_15535	COG0248	Ppx GppA phosphatase
FQ332_15545	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FQ332_15555	COG0514	ATP-dependent DNA helicase (RecQ)
FQ332_15560	COG2962	Rard protein
FQ332_15570	COG1280	lysine exporter protein (LysE YggA)
FQ332_15575	COG0405	Gamma-glutamyltransferase
FQ332_15585	COG0210	DNA helicase
FQ332_15595	COG3220	belongs to the UPF0276 family
FQ332_15625	COG0006	proline dipeptidase activity
FQ332_15625	COG0006	proline dipeptidase activity
FQ332_15640	COG2104	thiamine diphosphate biosynthetic process
FQ332_15645	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FQ332_15665	COG2132	Multicopper oxidase
FQ332_15710	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FQ332_15730	COG0009	L-threonylcarbamoyladenylate synthase
FQ332_15735	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FQ332_15740	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FQ332_15745	COG0551	DNA topoisomerase type I activity
FQ332_15750	COG2922	Belongs to the Smg family
FQ332_15755	COG0758	DNA mediated transformation
FQ332_15765	COG0242	peptide deformylase activity
FQ332_15770	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FQ332_15775	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FQ332_15775	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FQ332_15780	COG0569	domain protein
FQ332_15785	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FQ332_15795	COG1272	protein, Hemolysin III
FQ332_15800	COG4326	sporulation control protein
FQ332_15810	COG3084	Protein conserved in bacteria
FQ332_15820	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FQ332_15825	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FQ332_15830	COG0204	Acyl-transferase
FQ332_15840	COG0606	chelatase, subunit chli
FQ332_15850	COG3978	acetolactate synthase activity
FQ332_15855	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FQ332_15860	COG0129	dihydroxy-acid dehydratase activity
FQ332_15870	COG0583	DNA-binding transcription factor activity
FQ332_15875	COG2814	Major facilitator Superfamily
FQ332_15885	COG0765	amino acid transport
FQ332_15895	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FQ332_15900	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
FQ332_15905	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
FQ332_15910	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
FQ332_15915	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FQ332_15920	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
FQ332_15930	COG0356	it plays a direct role in the translocation of protons across the membrane
FQ332_15935	COG3312	ion transport
FQ332_15940	COG1475	DNA binding
FQ332_15945	COG1192	Involved in chromosome partitioning
FQ332_15950	COG0357	Ribosomal RNA small subunit methyltransferase G
FQ332_15955	COG0445	tRNA wobble uridine modification
FQ332_15960	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
FQ332_15970	COG0706	membrane insertase activity
FQ332_15980	COG0594	ribonuclease P activity
FQ332_15990	COG1126	abc transporter atp-binding protein
FQ332_16020	COG1444	tRNA N-acetyltransferase activity
FQ332_16040	COG3340	Belongs to the peptidase S51 family
FQ332_16045	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FQ332_16050	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FQ332_16050	COG1263	PTS System
FQ332_16055	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
FQ332_16075	COG4166	transmembrane transport
FQ332_16120	COG0259	pyridoxamine-phosphate oxidase activity
FQ332_16145	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FQ332_16185	COG1132	(ABC) transporter
FQ332_16195	COG0513	Belongs to the DEAD box helicase family
FQ332_16200	COG2258	MOSC domain
FQ332_16250	COG3634	alkyl hydroperoxide reductase activity
FQ332_16260	COG1846	Transcriptional regulator
FQ332_16265	COG1764	response to oxidative stress
FQ332_16305	COG1136	(ABC) transporter
FQ332_16320	COG0463	Glycosyl transferase, family 2
FQ332_16350	COG0019	diaminopimelate decarboxylase activity
FQ332_16355	COG4264	IucA IucC family
FQ332_16380	COG4772	TonB-dependent receptor
FQ332_16385	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
FQ332_16390	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FQ332_16395	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FQ332_16400	COG1120	ATPase activity
FQ332_16405	COG0840	transmembrane signaling receptor activity
FQ332_16440	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FQ332_16475	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FQ332_16480	COG1609	Transcriptional regulator
FQ332_16490	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FQ332_16535	COG1760	l-serine dehydratase
FQ332_16540	COG1760	l-serine dehydratase
FQ332_16550	COG4580	involved in the transport of maltose and maltodextrins
FQ332_16570	COG2356	endonuclease I
FQ332_16590	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
FQ332_16595	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
FQ332_16600	COG1162	GTPase activity
FQ332_16605	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FQ332_16605	COG1263	PTS System
FQ332_16610	COG1999	signal sequence binding
FQ332_16625	COG2909	trisaccharide binding
FQ332_16630	COG0058	SHG alpha-glucan phosphorylase activity
FQ332_16635	COG1640	4-alpha-glucanotransferase
FQ332_16645	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FQ332_16650	COG0366	Alpha amylase catalytic
FQ332_16665	COG3366	ferrous iron transmembrane transporter activity
FQ332_16670	COG0700	Nucleoside recognition
FQ332_16675	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FQ332_16680	COG3339	Conserved Protein
FQ332_16685	COG1301	dicarboxylic acid transport
FQ332_16715	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FQ332_16720	COG1596	polysaccharide export
FQ332_16735	COG2095	MarC family integral membrane protein
FQ332_16740	COG4667	esterase of the alpha-beta hydrolase superfamily
FQ332_16750	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
FQ332_16775	COG1686	Belongs to the peptidase S11 family
FQ332_16800	COG0583	DNA-binding transcription factor activity
FQ332_16805	COG4628	conserved protein (DUF2132)
FQ332_16825	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
FQ332_16890	COG0454	-acetyltransferase
FQ332_16905	COG2205	protein histidine kinase activity
FQ332_16920	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FQ332_16930	COG1882	Formate acetyltransferase
FQ332_16965	COG1360	Flagellar Motor Protein
FQ332_16970	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FQ332_16980	COG1580	Controls the rotational direction of flagella during chemotaxis
FQ332_17010	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FQ332_17025	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FQ332_17035	COG1987	bacterial-type flagellum assembly
FQ332_17075	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FQ332_17135	COG0346	lactoylglutathione lyase activity
FQ332_17160	COG0745	RESPONSE REGULATOR receiver
FQ332_17185	COG3300	MHYT domain
FQ332_17185	COG5001	Diguanylate cyclase
FQ332_17190	COG0156	8-amino-7-oxononanoate synthase activity
FQ332_17195	COG1063	alcohol dehydrogenase
FQ332_17230	COG0668	transmembrane transport
FQ332_17240	COG1304	FMN binding
FQ332_17245	COG1620	l-lactate permease
FQ332_17250	COG0583	DNA-binding transcription factor activity
FQ332_17255	COG1505	serine-type exopeptidase activity
FQ332_17260	COG4172	Belongs to the ABC transporter superfamily
FQ332_17275	COG0840	transmembrane signaling receptor activity
FQ332_17300	COG1247	-acetyltransferase
FQ332_17305	COG0437	4 iron, 4 sulfur cluster binding
FQ332_17330	COG1122	ATPase activity
FQ332_17335	COG4720	Psort location CytoplasmicMembrane, score
FQ332_17340	COG1566	PFAM secretion protein HlyD family protein
FQ332_17350	COG3706	GGDEF domain
FQ332_17365	COG0813	purine-nucleoside phosphorylase activity
FQ332_17375	COG3272	Protein of unknown function (DUF1722)
FQ332_17380	COG0789	Transcriptional regulator
FQ332_17385	COG0415	Belongs to the DNA photolyase family
FQ332_17390	COG1376	ErfK ybiS ycfS ynhG family protein
FQ332_17390	COG1388	LysM domain
FQ332_17400	COG0513	Belongs to the DEAD box helicase family
FQ332_17405	COG1770	oligopeptidase
FQ332_17410	COG4771	TonB-dependent receptor
FQ332_17440	COG0573	inorganic phosphate transmembrane transporter activity
FQ332_17445	COG0581	inorganic phosphate transmembrane transporter activity
FQ332_17450	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FQ332_17465	COG2304	oxidoreductase activity
FQ332_17485	COG0714	Associated with various cellular activities
FQ332_17500	COG2197	response regulator
FQ332_17535	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
FQ332_17540	COG1120	ATPase activity
FQ332_17545	COG4774	siderophore transport
FQ332_17550	COG1132	(ABC) transporter
FQ332_17555	COG2205	protein histidine kinase activity
FQ332_17565	COG0569	domain protein
FQ332_17570	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FQ332_17575	COG0583	DNA-binding transcription factor activity
FQ332_17590	COG1012	belongs to the aldehyde dehydrogenase family
FQ332_17595	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FQ332_17600	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FQ332_17615	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FQ332_17645	COG2084	Dehydrogenase
FQ332_17650	COG0753	catalase activity
FQ332_17660	COG2130	NADP-dependent
FQ332_17665	COG1309	transcriptional regulator
FQ332_17710	COG3206	protein involved in exopolysaccharide biosynthesis
FQ332_17710	COG0489	protein tyrosine kinase activity
FQ332_17725	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FQ332_17730	COG3842	ATPase activity
FQ332_17740	COG1175	transmembrane transport
FQ332_17745	COG3833	ABC-type maltose transport systems, permease component
FQ332_17765	COG2207	Transcriptional regulator
FQ332_17765	COG4753	response regulator
FQ332_17775	COG2354	Protein conserved in bacteria
FQ332_17780	COG0418	dihydroorotase activity
FQ332_17790	COG0401	homolog of Blt101
FQ332_17795	COG3217	Mosc domain protein beta barrel domain protein
FQ332_17795	COG0633	Ferredoxin
FQ332_17795	COG0633	Ferredoxin
FQ332_17795	COG3217	Mosc domain protein beta barrel domain protein
FQ332_17805	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
FQ332_17845	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
FQ332_17850	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FQ332_17860	COG0848	biopolymer transport protein
FQ332_17865	COG0811	peptide transport
FQ332_17870	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
FQ332_17880	COG3721	Heme iron utilization protein
FQ332_17885	COG0748	coenzyme F420 binding
FQ332_17895	COG0835	chemotaxis
FQ332_17895	COG0784	Response regulator, receiver
FQ332_17900	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FQ332_17905	COG0534	Mate efflux family protein
FQ332_17910	COG0444	Belongs to the ABC transporter superfamily
FQ332_17915	COG4608	Belongs to the ABC transporter superfamily
FQ332_17920	COG0747	negative chemotaxis
FQ332_17930	COG1349	DNA-binding transcription factor activity
FQ332_17935	COG2084	Dehydrogenase
FQ332_17940	COG3395	kinase activity
FQ332_17945	COG0235	Class ii aldolase
FQ332_17950	COG3622	Belongs to the hyi family
FQ332_17955	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FQ332_17960	COG2610	gluconate transmembrane transporter activity
FQ332_17980	COG0583	DNA-binding transcription factor activity
FQ332_17985	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
FQ332_17995	COG4934	collagen metabolic process
FQ332_18005	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FQ332_18010	COG0789	Transcriptional regulator
FQ332_18015	COG0366	Alpha amylase catalytic
FQ332_18035	COG2249	NAD(P)H dehydrogenase (quinone) activity
FQ332_18040	COG0589	response to stress
FQ332_18045	COG0488	(ABC) transporter
FQ332_18050	COG1505	serine-type exopeptidase activity
FQ332_18060	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FQ332_18070	COG2067	long-chain fatty acid transport protein
FQ332_18080	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FQ332_18105	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FQ332_18135	COG0842	Transport permease protein
FQ332_18140	COG1131	(ABC) transporter
FQ332_18155	COG1881	PFAM PEBP family protein
FQ332_18165	COG0798	PFAM Bile acid sodium symporter
FQ332_18180	COG1733	regulation of RNA biosynthetic process
FQ332_18205	COG4989	oxidoreductase activity
FQ332_18230	COG0814	amino acid
FQ332_18270	COG0739	heme binding
FQ332_18275	COG5001	Diguanylate cyclase
FQ332_18280	COG0583	DNA-binding transcription factor activity
FQ332_18285	COG2814	Major facilitator Superfamily
FQ332_18305	COG0697	spore germination
FQ332_18310	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FQ332_18320	COG0179	Fumarylacetoacetate (FAA) hydrolase
FQ332_18340	COG1280	lysine exporter protein (LysE YggA)
FQ332_18350	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FQ332_18355	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FQ332_18360	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FQ332_18365	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
FQ332_18370	COG1845	cytochrome c oxidase, subunit III
FQ332_18390	COG1612	heme a metabolic process
FQ332_18395	COG0109	protoheme IX farnesyltransferase activity
FQ332_18400	COG0545	Peptidyl-prolyl cis-trans isomerase
FQ332_18430	COG1278	Cold shock
FQ332_18435	COG3036	rescue of stalled ribosome
FQ332_18455	COG1132	(ABC) transporter
FQ332_18465	COG1538	Outer membrane efflux protein
FQ332_18470	COG2205	protein histidine kinase activity
FQ332_18470	COG0784	Response regulator, receiver
FQ332_18500	COG0840	transmembrane signaling receptor activity
FQ332_18505	COG0783	Belongs to the Dps family
FQ332_18520	COG1454	alcohol dehydrogenase
FQ332_18525	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
FQ332_18545	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FQ332_18550	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FQ332_18555	COG3186	Phenylalanine-4-hydroxylase
FQ332_18580	COG3530	Putative quorum-sensing-regulated virulence factor
FQ332_18605	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FQ332_18625	COG0730	response to heat
FQ332_18635	COG0513	Belongs to the DEAD box helicase family
FQ332_18640	COG4628	conserved protein (DUF2132)
FQ332_18650	COG0133	tryptophan synthase activity
FQ332_18660	COG1278	Cold shock
FQ332_18670	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
FQ332_18680	COG0523	cobalamin synthesis protein
FQ332_18685	COG0513	Belongs to the DEAD box helicase family
FQ332_18705	COG2200	EAL domain
FQ332_18710	COG1119	ATPase activity
FQ332_18745	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
FQ332_18750	COG0513	Belongs to the DEAD box helicase family
FQ332_18765	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FQ332_18775	COG1073	alpha beta
FQ332_18780	COG1073	alpha beta
FQ332_18810	COG1024	Enoyl-CoA hydratase
FQ332_18815	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FQ332_18820	COG1960	acyl-CoA dehydrogenase activity
FQ332_18830	COG0183	Belongs to the thiolase family
FQ332_18845	COG1024	Enoyl-CoA hydratase
FQ332_18850	COG1024	Enoyl-CoA hydratase
FQ332_18860	COG1028	Short-chain dehydrogenase reductase Sdr
FQ332_18865	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FQ332_18870	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FQ332_18875	COG1845	cytochrome c oxidase, subunit III
FQ332_18880	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FQ332_18885	COG0109	protoheme IX farnesyltransferase activity
FQ332_18890	COG0446	pyridine nucleotide-disulphide oxidoreductase
FQ332_18890	COG1902	pentaerythritol trinitrate reductase activity
FQ332_18905	COG1012	belongs to the aldehyde dehydrogenase family
FQ332_18915	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FQ332_18945	COG1126	abc transporter atp-binding protein
FQ332_18950	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FQ332_18955	COG4215	(ABC) transporter
FQ332_18960	COG4160	amino acid transport
FQ332_18975	COG0625	glutathione transferase activity
FQ332_19030	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FQ332_19035	COG2176	DNA-directed DNA polymerase activity
FQ332_19040	COG0517	IMP dehydrogenase activity
FQ332_19045	COG2186	Transcriptional regulator
FQ332_19050	COG2186	Transcriptional regulator
FQ332_19095	COG1917	Cupin 2, conserved barrel domain protein
FQ332_19100	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FQ332_19105	COG0800	Aldolase
FQ332_19115	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
FQ332_19120	COG1028	Short-chain dehydrogenase reductase Sdr
FQ332_19125	COG2847	Copper chaperone PCu(A)C
FQ332_19180	COG3706	GGDEF domain
FQ332_19190	COG0814	amino acid
FQ332_19200	COG0243	molybdopterin cofactor binding
FQ332_19230	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FQ332_19230	COG1116	anion transmembrane transporter activity
FQ332_19235	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FQ332_19240	COG1116	anion transmembrane transporter activity
FQ332_19245	COG2146	nitrite reductase [NAD(P)H] activity
FQ332_19245	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FQ332_19295	COG0515	serine threonine protein kinase
FQ332_19295	COG2815	serine threonine protein kinase
FQ332_19330	COG0631	protein serine/threonine phosphatase activity
FQ332_19385	COG3501	Rhs element vgr protein
FQ332_19400	COG0420	3'-5' exonuclease activity
FQ332_19405	COG0419	ATPase involved in DNA repair
FQ332_19415	COG3040	lipid binding
FQ332_19425	COG1288	antiporter activity
FQ332_19435	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
FQ332_19450	COG2425	protein containing a von Willebrand factor type A (vWA) domain
FQ332_19465	COG0583	DNA-binding transcription factor activity
FQ332_19470	COG0277	FAD linked oxidase domain protein
FQ332_19485	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FQ332_19560	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FQ332_19565	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FQ332_19575	COG2116	formate transmembrane transporter activity
FQ332_19595	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FQ332_19630	COG3118	belongs to the thioredoxin family
FQ332_19635	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FQ332_19660	COG2271	Major facilitator Superfamily
FQ332_19665	COG3851	Histidine kinase
FQ332_19670	COG2197	response regulator
FQ332_19680	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FQ332_19685	COG0583	DNA-binding transcription factor activity
FQ332_19695	COG0243	molybdopterin cofactor binding
FQ332_19710	COG0384	phenazine biosynthesis protein PhzF
FQ332_19715	COG1794	racemase activity, acting on amino acids and derivatives
FQ332_19750	COG0602	queuosine metabolic process
FQ332_19755	COG0534	Mate efflux family protein
FQ332_19760	COG2207	Transcriptional regulator
FQ332_19770	COG4067	protein conserved in archaea
FQ332_19770	COG0189	ligase activity
FQ332_19780	COG3111	PFAM Bacterial OB fold (BOF) protein
FQ332_19790	COG0725	ABC transporter, periplasmic molybdate-binding protein
FQ332_19795	COG4149	molybdate abc transporter
FQ332_19800	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
FQ332_19810	COG3706	GGDEF domain
FQ332_19810	COG4251	negative regulation of phosphorylation
FQ332_19810	COG5001	Diguanylate cyclase
FQ332_19810	COG2203	Gaf domain
FQ332_19830	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
FQ332_19835	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
FQ332_19860	COG3140	Belongs to the UPF0181 family
FQ332_19875	COG0583	DNA-binding transcription factor activity
FQ332_19890	COG0023	Translation Initiation Factor
FQ332_19900	COG1181	Belongs to the D-alanine--D-alanine ligase family
FQ332_19910	COG1042	CoA-binding domain protein
FQ332_19910	COG0045	succinate-CoA ligase (ADP-forming) activity
FQ332_19910	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FQ332_19915	COG0583	DNA-binding transcription factor activity
FQ332_19935	COG5001	Diguanylate cyclase
FQ332_19935	COG3447	MASE1 domain protein
FQ332_19935	COG5002	protein histidine kinase activity
FQ332_19950	COG1984	allophanate hydrolase subunit 2
FQ332_19960	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
FQ332_19965	COG4181	ATPase activity
FQ332_19975	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FQ332_19980	COG3300	MHYT domain
FQ332_19980	COG5001	Diguanylate cyclase
FQ332_20015	COG4533	DNA binding
FQ332_20025	COG2050	protein possibly involved in aromatic compounds catabolism
FQ332_20040	COG2067	long-chain fatty acid transport protein
FQ332_20045	COG2267	carboxylic ester hydrolase activity
FQ332_20075	COG0737	Belongs to the 5'-nucleotidase family
FQ332_20080	COG3593	DNA synthesis involved in DNA repair
FQ332_20090	COG0583	DNA-binding transcription factor activity
FQ332_20095	COG2116	formate transmembrane transporter activity
FQ332_20100	COG2353	YceI-like domain
FQ332_20105	COG3038	cytochrome b561
FQ332_20125	COG0513	Belongs to the DEAD box helicase family
FQ332_20130	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
FQ332_20140	COG0840	transmembrane signaling receptor activity
FQ332_20145	COG0546	phosphoglycolate phosphatase activity
FQ332_20160	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FQ332_20165	COG2759	Belongs to the formate--tetrahydrofolate ligase family
FQ332_20185	COG2207	Transcriptional regulator
FQ332_20190	COG1979	alcohol dehydrogenase
FQ332_20200	COG1126	abc transporter atp-binding protein
FQ332_20205	COG0765	amino acid transport
FQ332_20210	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FQ332_20280	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FQ332_20290	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FQ332_20295	COG0509	glycine decarboxylation via glycine cleavage system
FQ332_20305	COG0346	lactoylglutathione lyase activity
FQ332_20315	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FQ332_20320	COG0583	DNA-binding transcription factor activity
FQ332_20325	COG0697	spore germination
FQ332_20330	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FQ332_20415	COG0242	peptide deformylase activity
FQ332_20435	COG2239	Acts as a magnesium transporter
FQ332_20455	COG0346	lactoylglutathione lyase activity
FQ332_20460	COG1902	pentaerythritol trinitrate reductase activity
FQ332_20480	COG5642	Protein of unknown function (DUF2384)
FQ332_20485	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
FQ332_20520	COG2076	Multidrug Resistance protein
FQ332_20540	COG2962	Rard protein
FQ332_20555	COG0835	chemotaxis
FQ332_20555	COG0784	Response regulator, receiver
FQ332_20565	COG0745	RESPONSE REGULATOR receiver
FQ332_20575	COG3706	GGDEF domain
FQ332_20580	COG2197	response regulator
FQ332_20585	COG3300	MHYT domain
FQ332_20585	COG5001	Diguanylate cyclase
FQ332_20595	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
FQ332_20620	COG1214	PFAM Peptidase M22, glycoprotease
FQ332_20620	COG0456	acetyltransferase
FQ332_20630	COG3069	C4-dicarboxylate transmembrane transporter activity
FQ332_20655	COG3111	PFAM Bacterial OB fold (BOF) protein
FQ332_20660	COG1597	lipid kinase activity
FQ332_20665	COG0583	DNA-binding transcription factor activity
FQ332_20670	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FQ332_20700	COG0714	Associated with various cellular activities
FQ332_20705	COG0641	radical SAM
FQ332_20710	COG3119	arylsulfatase activity
FQ332_20720	COG3119	arylsulfatase activity
FQ332_20725	COG0745	RESPONSE REGULATOR receiver
FQ332_20740	COG0784	Response regulator, receiver
FQ332_20740	COG2198	Histidine kinase
FQ332_20740	COG2205	protein histidine kinase activity
FQ332_20745	COG1879	ABC-type sugar transport system periplasmic component
FQ332_20750	COG1803	Methylglyoxal synthase
FQ332_20755	COG0210	DNA helicase
FQ332_20760	COG1289	transmembrane transporter activity
FQ332_20790	COG1629	transport
FQ332_20790	COG4771	TonB-dependent receptor
FQ332_20800	COG0789	Transcriptional regulator
FQ332_20805	COG4604	ABC transporter, ATP-binding protein
FQ332_20810	COG4605	iron ion homeostasis
FQ332_20815	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FQ332_20820	COG4607	ABC-type enterochelin transport system periplasmic component
FQ332_20830	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
FQ332_20840	COG1609	Transcriptional regulator
FQ332_20845	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FQ332_20850	COG1879	ABC-type sugar transport system periplasmic component
FQ332_20855	COG1172	Belongs to the binding-protein-dependent transport system permease family
FQ332_20860	COG1129	ABC transporter
FQ332_20865	COG1869	D-ribose catabolic process
FQ332_20870	COG5001	Diguanylate cyclase
FQ332_20920	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FQ332_20930	COG0784	Response regulator, receiver
FQ332_20930	COG2205	protein histidine kinase activity
FQ332_20945	COG0330	HflC and HflK could
FQ332_20960	COG0517	IMP dehydrogenase activity
FQ332_20960	COG4175	Glycine betaine
FQ332_20980	COG1012	belongs to the aldehyde dehydrogenase family
FQ332_20985	COG1309	transcriptional regulator
FQ332_20995	COG1028	Short-chain dehydrogenase reductase Sdr
FQ332_21010	COG1024	Enoyl-CoA hydratase
FQ332_21015	COG1960	acyl-CoA dehydrogenase activity
FQ332_21025	COG0183	Belongs to the thiolase family
FQ332_21035	COG1960	acyl-CoA dehydrogenase activity
FQ332_21050	COG4770	biotin carboxylase activity
FQ332_21065	COG3264	Mechanosensitive ion channel
FQ332_21065	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
FQ332_21075	COG0110	maltose O-acetyltransferase activity
FQ332_21080	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FQ332_21085	COG1271	oxidase subunit
FQ332_21090	COG1294	oxidase, subunit
FQ332_21100	COG0384	phenazine biosynthesis protein PhzF
FQ332_21110	COG3527	Alpha-acetolactate decarboxylase
FQ332_21125	COG0500	methyltransferase
FQ332_21155	COG1022	Amp-dependent synthetase and ligase
FQ332_21185	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FQ332_21190	COG1263	PTS System
FQ332_21190	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FQ332_21195	COG1486	melibiose metabolic process
FQ332_21200	COG2188	Transcriptional regulator
FQ332_21205	COG1320	monovalent cation:proton antiporter activity
FQ332_21210	COG2212	antiporter activity
FQ332_21225	COG1006	Multisubunit Na H antiporter MnhC subunit
FQ332_21230	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FQ332_21230	COG2111	Na H antiporter
FQ332_21240	COG0589	response to stress
FQ332_21245	COG4221	oxidoreductase activity
FQ332_21250	COG0583	DNA-binding transcription factor activity
FQ332_21260	COG2814	Major facilitator Superfamily
FQ332_21280	COG3179	chitinase
FQ332_21325	COG1522	sequence-specific DNA binding
FQ332_21360	COG0515	serine threonine protein kinase
FQ332_21385	COG3501	Rhs element vgr protein
FQ332_21425	COG0739	heme binding
FQ332_21440	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FQ332_21455	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FQ332_21455	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FQ332_21485	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
FQ332_21495	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FQ332_21495	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
FQ332_21510	COG4989	oxidoreductase activity
FQ332_21525	COG0038	chloride channel
FQ332_21545	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FQ332_21560	COG2897	thiosulfate sulfurtransferase activity
FQ332_21575	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FQ332_21580	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FQ332_21585	COG0840	transmembrane signaling receptor activity
FQ332_21590	COG2814	Major facilitator Superfamily
FQ332_21595	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FQ332_21605	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FQ332_21615	COG0840	transmembrane signaling receptor activity
FQ332_21635	COG2195	Cleaves the N-terminal amino acid of tripeptides
FQ332_21650	COG2197	response regulator
FQ332_21655	COG3850	Histidine kinase
FQ332_21660	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FQ332_21670	COG0243	molybdopterin cofactor binding
FQ332_21680	COG3005	denitrification pathway
FQ332_21690	COG3243	poly(R)-hydroxyalkanoic acid synthase
FQ332_21700	COG0183	Belongs to the thiolase family
FQ332_21710	COG1280	lysine exporter protein (LysE YggA)
FQ332_21720	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FQ332_21725	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FQ332_21770	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FQ332_21775	COG1846	Transcriptional regulator
FQ332_21780	COG0784	Response regulator, receiver
FQ332_21780	COG2205	protein histidine kinase activity
FQ332_21785	COG1879	ABC-type sugar transport system periplasmic component
FQ332_21790	COG2827	Endonuclease containing a URI domain
FQ332_21795	COG3132	Protein of unknown function, DUF480
FQ332_21815	COG2205	protein histidine kinase activity
FQ332_21815	COG0784	Response regulator, receiver
FQ332_21815	COG5002	protein histidine kinase activity
FQ332_21840	COG0583	DNA-binding transcription factor activity
FQ332_21855	COG0531	amino acid
FQ332_21870	COG2205	protein histidine kinase activity
FQ332_21875	COG0745	RESPONSE REGULATOR receiver
FQ332_21900	COG1566	PFAM secretion protein HlyD family protein
FQ332_21905	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FQ332_21910	COG2239	Acts as a magnesium transporter
FQ332_21915	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
FQ332_21920	COG0402	S-adenosylhomocysteine deaminase activity
FQ332_21925	COG1418	mRNA catabolic process
FQ332_21940	COG2814	Major facilitator Superfamily
FQ332_21950	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FQ332_21970	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FQ332_21985	COG0745	RESPONSE REGULATOR receiver
FQ332_21990	COG2205	protein histidine kinase activity
FQ332_22000	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FQ332_22005	COG2194	sulfuric ester hydrolase activity
FQ332_22025	COG4667	esterase of the alpha-beta hydrolase superfamily
FQ332_22030	COG1741	Belongs to the pirin family
FQ332_22035	COG1278	Cold shock
FQ332_22050	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FQ332_22055	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FQ332_22055	COG0678	peroxiredoxin activity
FQ332_22065	COG1686	Belongs to the peptidase S11 family
FQ332_22070	COG0625	glutathione transferase activity
FQ332_22080	COG1621	beta-fructofuranosidase activity
FQ332_22085	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FQ332_22090	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FQ332_22090	COG1263	PTS System
FQ332_22110	COG1028	Short-chain dehydrogenase reductase Sdr
FQ332_22125	COG3746	phosphate-selective porin O and P
FQ332_22145	COG0583	DNA-binding transcription factor activity
FQ332_22150	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FQ332_22150	COG2207	Transcriptional regulator
FQ332_22210	COG1902	pentaerythritol trinitrate reductase activity
FQ332_22215	COG1063	alcohol dehydrogenase
FQ332_22225	COG1028	Short-chain dehydrogenase reductase Sdr
FQ332_22235	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FQ332_22240	COG0006	proline dipeptidase activity
FQ332_22245	COG3608	succinylglutamate desuccinylase aspartoacylase
FQ332_22250	COG1522	sequence-specific DNA binding
FQ332_22255	COG1012	belongs to the aldehyde dehydrogenase family
FQ332_22260	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FQ332_22265	COG3122	Protein conserved in bacteria
FQ332_22280	COG0583	DNA-binding transcription factor activity
FQ332_22290	COG0252	asparaginase activity
FQ332_22295	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
FQ332_22310	COG2197	response regulator
FQ332_22315	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FQ332_22340	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FQ332_22370	COG3842	ATPase activity
FQ332_22390	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FQ332_22425	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FQ332_22465	COG0583	DNA-binding transcription factor activity
FQ332_22475	COG4948	Mandelate Racemase Muconate Lactonizing
FQ332_22510	COG1342	Belongs to the UPF0251 family
FQ332_22515	COG4176	ABC-type proline glycine betaine transport system permease component
FQ332_22520	COG4175	Glycine betaine
FQ332_22520	COG3448	diguanylate cyclase activity
FQ332_22525	COG3015	lipoprotein NlpE involved in copper resistance
FQ332_22530	COG3713	MltA-interacting MipA family protein
FQ332_22545	COG0583	DNA-binding transcription factor activity
FQ332_22570	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
FQ332_22580	COG1335	isochorismatase
FQ332_22595	COG1349	DNA-binding transcription factor activity
FQ332_22605	COG2070	2-Nitropropane dioxygenase
FQ332_22610	COG0531	amino acid
FQ332_22615	COG4302	ethanolamine ammonia-lyase activity
FQ332_22620	COG4303	Ethanolamine ammonia lyase large subunit
FQ332_22630	COG1309	transcriptional regulator
FQ332_22650	COG1280	lysine exporter protein (LysE YggA)
FQ332_22660	COG0459	protein refolding
FQ332_22665	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FQ332_22670	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FQ332_22685	COG1304	FMN binding
FQ332_22710	COG1256	bacterial-type flagellum assembly
FQ332_22710	COG4786	Flagellar basal body rod
FQ332_22720	COG1706	bacterial-type flagellum-dependent cell motility
FQ332_22725	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
FQ332_22730	COG4786	Flagellar basal body rod
FQ332_22735	COG4787	bacterial-type flagellum-dependent cell motility
FQ332_22750	COG1558	bacterial-type flagellum-dependent cell motility
FQ332_22755	COG1815	bacterial-type flagellum-dependent cell motility
FQ332_22775	COG0741	lytic transglycosylase activity
FQ332_22780	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
FQ332_22815	COG0583	DNA-binding transcription factor activity
FQ332_22825	COG2866	Carboxypeptidase
FQ332_22830	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FQ332_22840	COG2990	Protein conserved in bacteria
FQ332_22865	COG3842	ATPase activity
FQ332_22870	COG1840	ABC-type Fe3 transport system, periplasmic component
FQ332_22890	COG1609	Transcriptional regulator
FQ332_22920	COG3240	lipase activity
FQ332_22925	COG1309	transcriptional regulator
FQ332_22940	COG0577	efflux transmembrane transporter activity
FQ332_22940	COG1136	(ABC) transporter
FQ332_22945	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FQ332_22950	COG2067	long-chain fatty acid transport protein
FQ332_22960	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
FQ332_22975	COG1011	Hydrolase
FQ332_23000	COG0110	maltose O-acetyltransferase activity
FQ332_23005	COG1765	OsmC-like protein
FQ332_23010	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FQ332_23010	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FQ332_23025	COG3046	protein related to deoxyribodipyrimidine photolyase
FQ332_23030	COG0415	Belongs to the DNA photolyase family
FQ332_23035	COG3706	GGDEF domain
FQ332_23050	COG3706	GGDEF domain
FQ332_23065	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FQ332_23080	COG3033	Beta-eliminating lyase
FQ332_23090	COG1271	oxidase subunit
FQ332_23095	COG1294	oxidase, subunit
FQ332_23110	COG0579	oxidoreductase
FQ332_23135	COG3706	GGDEF domain
FQ332_23145	COG4191	Histidine kinase
FQ332_23170	COG0583	DNA-binding transcription factor activity
FQ332_23190	COG0189	ligase activity
FQ332_23195	COG0189	ligase activity
FQ332_23195	COG4067	protein conserved in archaea
FQ332_23205	COG1166	arginine decarboxylase activity
FQ332_23210	COG0010	Belongs to the arginase family
FQ332_23215	COG2814	Major facilitator Superfamily
FQ332_23235	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FQ332_23240	COG1121	(ABC) transporter
FQ332_23245	COG0803	Belongs to the bacterial solute-binding protein 9 family
FQ332_23285	COG0848	biopolymer transport protein
FQ332_23290	COG0811	peptide transport
FQ332_23295	COG0811	peptide transport
FQ332_23315	COG0745	RESPONSE REGULATOR receiver
FQ332_23320	COG0584	glycerophosphoryl diester phosphodiesterase
FQ332_23330	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FQ332_23390	COG1901	pseudouridine methyltransferase
FQ332_23395	COG0312	modulator of DNA gyrase
FQ332_23400	COG0312	modulator of DNA gyrase
FQ332_23405	COG0351	phosphomethylpyrimidine kinase
FQ332_23410	COG1116	anion transmembrane transporter activity
FQ332_23415	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FQ332_23420	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FQ332_23425	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
FQ332_23430	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
FQ332_23445	COG0243	molybdopterin cofactor binding
FQ332_23450	COG3005	denitrification pathway
FQ332_23455	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FQ332_23460	COG1028	Short-chain dehydrogenase reductase Sdr
FQ332_23475	COG0456	acetyltransferase
FQ332_23495	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FQ332_23500	COG1929	Belongs to the glycerate kinase type-1 family
FQ332_23505	COG2610	gluconate transmembrane transporter activity
FQ332_23510	COG3835	regulator
FQ332_23570	COG3047	cAMP biosynthetic process
FQ332_23575	COG1357	PFAM Pentapeptide repeats (8 copies)
FQ332_23605	COG2375	cellular response to nickel ion
FQ332_23610	COG0583	DNA-binding transcription factor activity
FQ332_23615	COG2162	N-hydroxyarylamine O-acetyltransferase activity
FQ332_23620	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
FQ332_23635	COG2199	diguanylate cyclase activity
FQ332_23645	COG0561	phosphatase activity
FQ332_23650	COG0583	DNA-binding transcription factor activity
FQ332_23665	COG0564	pseudouridine synthase activity
FQ332_23670	COG0534	Mate efflux family protein
FQ332_23675	COG5001	Diguanylate cyclase
FQ332_23685	COG3123	guanosine phosphorylase activity
FQ332_23700	COG0596	Alpha beta hydrolase
FQ332_23725	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FQ332_23735	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FQ332_23740	COG2169	Transcriptional regulator
FQ332_23740	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FQ332_23750	COG2259	Doxx family
FQ332_23755	COG1741	Belongs to the pirin family
FQ332_23775	COG0363	glucosamine-6-phosphate deaminase activity
FQ332_23785	COG0786	glutamate:sodium symporter activity
FQ332_23790	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FQ332_23795	COG1131	(ABC) transporter
FQ332_23805	COG0786	glutamate:sodium symporter activity
FQ332_23825	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FQ332_23835	COG3279	Response regulator of the LytR AlgR family
FQ332_23840	COG3275	phosphorelay sensor kinase activity
FQ332_23860	COG1136	(ABC) transporter
FQ332_23870	COG0772	Belongs to the SEDS family
FQ332_23895	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
FQ332_23895	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FQ332_23905	COG0444	Belongs to the ABC transporter superfamily
FQ332_23910	COG4608	Belongs to the ABC transporter superfamily