locus-tag class description FR741_00005 PF11638 DnaA N-terminal domain FR741_00005 PF00308 Bacterial dnaA protein FR741_00005 PF08299 Bacterial dnaA protein helix-turn-helix FR741_00015 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR741_00020 PF00528 Binding-protein-dependent transport system inner membrane component FR741_00025 PF00005 ABC transporter FR741_00030 PF00468 Ribosomal protein L34 FR741_00035 PF00825 Ribonuclease P FR741_00040 PF01809 Putative membrane protein insertion efficiency factor FR741_00045 PF14849 YidC periplasmic domain FR741_00045 PF02096 60Kd inner membrane protein FR741_00050 PF10396 GTP-binding protein TrmE N-terminus FR741_00050 PF12631 MnmE helical domain FR741_00050 PF01926 50S ribosome-binding GTPase FR741_00055 PF00258 Flavodoxin FR741_00060 PF01134 Glucose inhibited division protein A FR741_00060 PF13932 GidA associated domain FR741_00065 PF02527 rRNA small subunit methyltransferase G FR741_00070 PF13614 AAA domain FR741_00075 PF17762 HTH domain found in ParB protein FR741_00075 PF02195 ParB-like nuclease domain FR741_00080 PF03899 ATP synthase I chain FR741_00085 PF00119 ATP synthase A chain FR741_00090 PF00137 ATP synthase subunit C FR741_00095 PF00430 ATP synthase B/B' CF(0) FR741_00100 PF00213 ATP synthase delta (OSCP) subunit FR741_00105 PF00306 ATP synthase alpha/beta chain, C terminal domain FR741_00105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FR741_00105 PF02874 ATP synthase alpha/beta family, beta-barrel domain FR741_00110 PF00231 ATP synthase FR741_00115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FR741_00115 PF02874 ATP synthase alpha/beta family, beta-barrel domain FR741_00120 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FR741_00120 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FR741_00125 PF12804 MobA-like NTP transferase domain FR741_00125 PF00132 Bacterial transferase hexapeptide (six repeats) FR741_00130 PF00528 Binding-protein-dependent transport system inner membrane component FR741_00135 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR741_00140 PF07690 Major Facilitator Superfamily FR741_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_00145 PF03466 LysR substrate binding domain FR741_00150 PF00291 Pyridoxal-phosphate dependent enzyme FR741_00150 PF00585 C-terminal regulatory domain of Threonine dehydratase FR741_00155 PF00920 Dehydratase family FR741_00160 PF01063 Amino-transferase class IV FR741_00170 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FR741_00170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FR741_00170 PF00205 Thiamine pyrophosphate enzyme, central domain FR741_00175 PF13335 Magnesium chelatase, subunit ChlI C-terminal FR741_00175 PF01078 Magnesium chelatase, subunit ChlI FR741_00185 PF01553 Acyltransferase FR741_00190 PF01323 DSBA-like thioredoxin domain FR741_00195 PF01636 Phosphotransferase enzyme family FR741_00200 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FR741_00200 PF12801 4Fe-4S binding domain FR741_00200 PF13746 4Fe-4S dicluster domain FR741_00205 PF06288 Protein of unknown function (DUF1040) FR741_00215 PF07070 SpoOM protein FR741_00220 PF03006 Haemolysin-III related FR741_00230 PF02386 Cation transport protein FR741_00235 PF02254 TrkA-N domain FR741_00235 PF02080 TrkA-C domain FR741_00240 PF01029 NusB family FR741_00240 PF01189 16S rRNA methyltransferase RsmB/F FR741_00245 PF02911 Formyl transferase, C-terminal domain FR741_00245 PF00551 Formyl transferase FR741_00250 PF01327 Polypeptide deformylase FR741_00260 PF17782 DprA winged helix domain FR741_00260 PF02481 DNA recombination-mediator protein A FR741_00265 PF04361 Protein of unknown function (DUF494) FR741_00270 PF01396 Topoisomerase DNA binding C4 zinc finger FR741_00275 PF02222 ATP-grasp domain FR741_00275 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FR741_00280 PF00731 AIR carboxylase FR741_00285 PF01300 Telomere recombination FR741_00290 PF01218 Coproporphyrinogen III oxidase FR741_00295 PF08501 Shikimate dehydrogenase substrate binding domain FR741_00295 PF01488 Shikimate / quinate 5-dehydrogenase FR741_00295 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FR741_00300 PF07369 Protein of unknown function (DUF1488) FR741_00305 PF00132 Bacterial transferase hexapeptide (six repeats) FR741_00355 PF00394 Multicopper oxidase FR741_00355 PF07732 Multicopper oxidase FR741_00355 PF07731 Multicopper oxidase FR741_00360 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FR741_00365 PF01964 Radical SAM ThiC family FR741_00365 PF13667 ThiC-associated domain FR741_00370 PF02581 Thiamine monophosphate synthase FR741_00375 PF00899 ThiF family FR741_00385 PF05690 Thiazole biosynthesis protein ThiG FR741_00390 PF04055 Radical SAM superfamily FR741_00390 PF06968 Biotin and Thiamin Synthesis associated domain FR741_00395 PF00557 Metallopeptidase family M24 FR741_00395 PF00557 Metallopeptidase family M24 FR741_00395 PF01321 Creatinase/Prolidase N-terminal domain FR741_00395 PF01321 Creatinase/Prolidase N-terminal domain FR741_00400 PF03466 LysR substrate binding domain FR741_00400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_00405 PF07690 Major Facilitator Superfamily FR741_00425 PF05114 Protein of unknown function (DUF692) FR741_00435 PF00580 UvrD/REP helicase N-terminal domain FR741_00435 PF13361 UvrD-like helicase C-terminal domain FR741_00450 PF01810 LysE type translocator FR741_00460 PF00892 EamA-like transporter family FR741_00465 PF00271 Helicase conserved C-terminal domain FR741_00465 PF00270 DEAD/DEAH box helicase FR741_00465 PF16124 RecQ zinc-binding FR741_00465 PF00570 HRDC domain FR741_00465 PF09382 RQC domain FR741_00475 PF02592 Putative vitamin uptake transporter FR741_00480 PF02541 Ppx/GppA phosphatase family FR741_00485 PF00271 Helicase conserved C-terminal domain FR741_00485 PF00270 DEAD/DEAH box helicase FR741_00490 PF00085 Thioredoxin FR741_00495 PF07498 Rho termination factor, N-terminal domain FR741_00495 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FR741_00495 PF07497 Rho termination factor, RNA-binding domain FR741_00505 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FR741_00510 PF00111 2Fe-2S iron-sulfur cluster binding domain FR741_00515 PF00175 Oxidoreductase NAD-binding domain FR741_00555 PF07219 HemY protein N-terminus FR741_00560 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase FR741_00565 PF02602 Uroporphyrinogen-III synthase HemD FR741_00570 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FR741_00570 PF03900 Porphobilinogen deaminase, C-terminal domain FR741_00575 PF12633 Adenylate cyclase NT domain FR741_00575 PF01295 Adenylate cyclase, class-I FR741_00580 PF01491 Frataxin-like domain FR741_00590 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FR741_00590 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FR741_00595 PF01678 Diaminopimelate epimerase FR741_00605 PF02899 Phage integrase, N-terminal SAM-like domain FR741_00605 PF00589 Phage integrase family FR741_00610 PF13419 Haloacid dehalogenase-like hydrolase FR741_00615 PF00563 EAL domain FR741_00615 PF08495 FIST N domain FR741_00615 PF10442 FIST C domain FR741_00615 PF00990 Diguanylate cyclase, GGDEF domain FR741_00640 PF12146 Serine aminopeptidase, S33 FR741_00645 PF01810 LysE type translocator FR741_00650 PF00563 EAL domain FR741_00650 PF08668 HDOD domain FR741_00655 PF01022 Bacterial regulatory protein, arsR family FR741_00660 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FR741_00660 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FR741_00680 PF10694 Protein of unknown function (DUF2500) FR741_00710 PF01914 MarC family integral membrane protein FR741_00725 PF00448 SRP54-type protein, GTPase domain FR741_00725 PF02881 SRP54-type protein, helical bundle domain FR741_00730 PF00005 ABC transporter FR741_00735 PF18075 FtsX extracellular domain FR741_00740 PF04542 Sigma-70 region 2 FR741_00740 PF00140 Sigma-70 factor, region 1.2 FR741_00740 PF04545 Sigma-70, region 4 FR741_00750 PF00581 Rhodanese-like domain FR741_00755 PF01694 Rhomboid family FR741_00755 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease FR741_00760 PF03748 Flagellar basal body-associated protein FliL FR741_00765 PF04345 Chorismate lyase FR741_00770 PF01040 UbiA prenyltransferase family FR741_00775 PF01553 Acyltransferase FR741_00785 PF01726 LexA DNA binding domain FR741_00785 PF00717 Peptidase S24-like FR741_00795 PF04072 Leucine carboxyl methyltransferase FR741_00800 PF01554 MatE FR741_00805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FR741_00805 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR741_00810 PF00440 Bacterial regulatory proteins, tetR family FR741_00820 PF05958 tRNA (Uracil-5-)-methyltransferase FR741_00825 PF00593 TonB dependent receptor FR741_00825 PF07715 TonB-dependent Receptor Plug Domain FR741_00835 PF01177 Asp/Glu/Hydantoin racemase FR741_00890 PF13091 PLD-like domain FR741_00900 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FR741_00900 PF01565 FAD binding domain FR741_00905 PF03099 Biotin/lipoate A/B protein ligase family FR741_00905 PF02237 Biotin protein ligase C terminal domain FR741_00905 PF08279 HTH domain FR741_00910 PF00485 Phosphoribulokinase / Uridine kinase family FR741_00940 PF00009 Elongation factor Tu GTP binding domain FR741_00940 PF03144 Elongation factor Tu domain 2 FR741_00940 PF03143 Elongation factor Tu C-terminal domain FR741_00950 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FR741_00955 PF02357 Transcription termination factor nusG FR741_00955 PF00467 KOW motif FR741_00960 PF03946 Ribosomal protein L11, N-terminal domain FR741_00960 PF00298 Ribosomal protein L11, RNA binding domain FR741_00965 PF00687 Ribosomal protein L1p/L10e family FR741_00970 PF00466 Ribosomal protein L10 FR741_00975 PF00542 Ribosomal protein L7/L12 C-terminal domain FR741_00975 PF16320 Ribosomal protein L7/L12 dimerisation domain FR741_00980 PF04563 RNA polymerase beta subunit FR741_00980 PF00562 RNA polymerase Rpb2, domain 6 FR741_00980 PF10385 RNA polymerase beta subunit external 1 domain FR741_00980 PF04560 RNA polymerase Rpb2, domain 7 FR741_00980 PF04561 RNA polymerase Rpb2, domain 2 FR741_00980 PF04565 RNA polymerase Rpb2, domain 3 FR741_00985 PF04998 RNA polymerase Rpb1, domain 5 FR741_00985 PF04983 RNA polymerase Rpb1, domain 3 FR741_00985 PF05000 RNA polymerase Rpb1, domain 4 FR741_00985 PF04997 RNA polymerase Rpb1, domain 1 FR741_00985 PF00623 RNA polymerase Rpb1, domain 2 FR741_00990 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ FR741_00995 PF00293 NUDIX domain FR741_00995 PF09297 NADH pyrophosphatase zinc ribbon domain FR741_01000 PF01208 Uroporphyrinogen decarboxylase (URO-D) FR741_01005 PF03167 Uracil DNA glycosylase superfamily FR741_01010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FR741_01015 PF04222 Protein of unknown function (DUF416) FR741_01020 PF00571 CBS domain FR741_01020 PF01595 Cyclin M transmembrane N-terminal domain FR741_01025 PF00216 Bacterial DNA-binding protein FR741_01035 PF02844 Phosphoribosylglycinamide synthetase, N domain FR741_01035 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FR741_01035 PF02843 Phosphoribosylglycinamide synthetase, C domain FR741_01045 PF02142 MGS-like domain FR741_01045 PF01808 AICARFT/IMPCHase bienzyme FR741_01055 PF13411 MerR HTH family regulatory protein FR741_01060 PF18500 CadC C-terminal domain 1 FR741_01060 PF00486 Transcriptional regulatory protein, C terminal FR741_01070 PF13520 Amino acid permease FR741_01075 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FR741_01075 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FR741_01075 PF01276 Orn/Lys/Arg decarboxylase, major domain FR741_01140 PF12848 ABC transporter FR741_01140 PF00005 ABC transporter FR741_01150 PF02954 Bacterial regulatory protein, Fis family FR741_01155 PF01207 Dihydrouridine synthase (Dus) FR741_01170 PF02785 Biotin carboxylase C-terminal domain FR741_01170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FR741_01170 PF00289 Biotin carboxylase, N-terminal domain FR741_01175 PF00364 Biotin-requiring enzyme FR741_01180 PF01220 Dehydroquinase class II FR741_01185 PF16177 Acetyl-coenzyme A synthetase N-terminus FR741_01185 PF13193 AMP-binding enzyme C-terminal domain FR741_01185 PF00501 AMP-binding enzyme FR741_01200 PF12832 MFS_1 like family FR741_01205 PF00512 His Kinase A (phospho-acceptor) domain FR741_01205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_01205 PF00072 Response regulator receiver domain FR741_01205 PF09308 LuxQ, periplasmic FR741_01210 PF00206 Lyase FR741_01210 PF10415 Fumarase C C-terminus FR741_01225 PF00474 Sodium:solute symporter family FR741_01235 PF03471 Transporter associated domain FR741_01235 PF02080 TrkA-C domain FR741_01235 PF00999 Sodium/hydrogen exchanger family FR741_01240 PF00196 Bacterial regulatory proteins, luxR family FR741_01240 PF00072 Response regulator receiver domain FR741_01245 PF11412 Disulphide bond corrector protein DsbC FR741_01245 PF02683 Cytochrome C biogenesis protein transmembrane region FR741_01250 PF03605 Anaerobic c4-dicarboxylate membrane transporter FR741_01255 PF00206 Lyase FR741_01255 PF10415 Fumarase C C-terminus FR741_01260 PF04186 FxsA cytoplasmic membrane protein FR741_01265 PF00588 SpoU rRNA Methylase family FR741_01270 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FR741_01270 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FR741_01275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_01275 PF00512 His Kinase A (phospho-acceptor) domain FR741_01275 PF00672 HAMP domain FR741_01275 PF16527 Two-component sensor protein CpxA, periplasmic domain FR741_01280 PF00072 Response regulator receiver domain FR741_01280 PF00486 Transcriptional regulatory protein, C terminal FR741_01285 PF07813 LTXXQ motif family protein FR741_01290 PF16916 Dimerisation domain of Zinc Transporter FR741_01290 PF01545 Cation efflux family FR741_01295 PF00365 Phosphofructokinase FR741_01300 PF01554 MatE FR741_01305 PF00166 Chaperonin 10 Kd subunit FR741_01310 PF00118 TCP-1/cpn60 chaperonin family FR741_01320 PF02308 MgtC family FR741_01325 PF04055 Radical SAM superfamily FR741_01330 PF09285 Elongation factor P, C-terminal FR741_01330 PF01132 Elongation factor P (EF-P) OB domain FR741_01330 PF08207 Elongation factor P (EF-P) KOW-like domain FR741_01340 PF02313 Fumarate reductase subunit D FR741_01345 PF02300 Fumarate reductase subunit C FR741_01350 PF13183 4Fe-4S dicluster domain FR741_01350 PF13085 2Fe-2S iron-sulfur cluster binding domain FR741_01355 PF00890 FAD binding domain FR741_01355 PF02910 Fumarate reductase flavoprotein C-term FR741_01360 PF00152 tRNA synthetases class II (D, K and N) FR741_01370 PF00440 Bacterial regulatory proteins, tetR family FR741_01370 PF08360 QacR-like protein, C-terminal region FR741_01380 PF01551 Peptidase family M23 FR741_01385 PF00132 Bacterial transferase hexapeptide (six repeats) FR741_01385 PF06426 Serine acetyltransferase, N-terminal FR741_01390 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FR741_01390 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FR741_01395 PF02556 Preprotein translocase subunit SecB FR741_01400 PF00581 Rhodanese-like domain FR741_01405 PF01676 Metalloenzyme superfamily FR741_01405 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FR741_01415 PF03600 Citrate transporter FR741_01415 PF02080 TrkA-C domain FR741_01420 PF02666 Phosphatidylserine decarboxylase FR741_01425 PF03193 RsgA GTPase FR741_01430 PF00929 Exonuclease FR741_01495 PF08331 Domain of unknown function (DUF1730) FR741_01505 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FR741_01510 PF01520 N-acetylmuramoyl-L-alanine amidase FR741_01515 PF08676 MutL C terminal dimerisation domain FR741_01515 PF01119 DNA mismatch repair protein, C-terminal domain FR741_01525 PF17209 Hfq protein FR741_01530 PF01926 50S ribosome-binding GTPase FR741_01530 PF13167 GTP-binding GTPase N-terminal FR741_01530 PF16360 GTP-binding GTPase Middle Region FR741_01535 PF01145 SPFH domain / Band 7 family FR741_01535 PF12221 Bacterial membrane protein N terminal FR741_01540 PF01145 SPFH domain / Band 7 family FR741_01545 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) FR741_01550 PF00709 Adenylosuccinate synthetase FR741_01560 PF08238 Sel1 repeat FR741_01565 PF00970 Oxidoreductase FAD-binding domain FR741_01565 PF00042 Globin FR741_01565 PF00175 Oxidoreductase NAD-binding domain FR741_01570 PF02082 Transcriptional regulator FR741_01575 PF00575 S1 RNA binding domain FR741_01575 PF08206 Ribonuclease B OB domain FR741_01575 PF08461 Ribonuclease R winged-helix domain FR741_01575 PF17876 Cold shock domain FR741_01575 PF00773 RNB domain FR741_01580 PF00588 SpoU rRNA Methylase family FR741_01580 PF08032 RNA 2'-O ribose methyltransferase substrate binding FR741_01585 PF13419 Haloacid dehalogenase-like hydrolase FR741_01590 PF00579 tRNA synthetases class I (W and Y) FR741_01605 PF00117 Glutamine amidotransferase class-I FR741_01610 PF00202 Aminotransferase class-III FR741_01615 PF04958 Arginine N-succinyltransferase beta subunit FR741_01620 PF00171 Aldehyde dehydrogenase family FR741_01630 PF00027 Cyclic nucleotide-binding domain FR741_01630 PF13545 Crp-like helix-turn-helix domain FR741_01635 PF00485 Phosphoribulokinase / Uridine kinase family FR741_01640 PF06794 Uncharacterised protein family (UPF0270) FR741_01645 PF00561 alpha/beta hydrolase fold FR741_01655 PF00005 ABC transporter FR741_01655 PF12848 ABC transporter FR741_01660 PF02525 Flavodoxin-like fold FR741_01665 PF02254 TrkA-N domain FR741_01665 PF00999 Sodium/hydrogen exchanger family FR741_01675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FR741_01680 PF01112 Asparaginase FR741_01685 PF04102 SlyX FR741_01695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FR741_01695 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FR741_01700 PF08348 YheO-like PAS domain FR741_01700 PF13309 HTH domain FR741_01705 PF02635 DsrE/DsrF-like family FR741_01710 PF02635 DsrE/DsrF-like family FR741_01715 PF04077 DsrH like protein FR741_01720 PF00164 Ribosomal protein S12/S23 FR741_01725 PF00177 Ribosomal protein S7p/S5e FR741_01730 PF03144 Elongation factor Tu domain 2 FR741_01730 PF03764 Elongation factor G, domain IV FR741_01730 PF14492 Elongation Factor G, domain II FR741_01730 PF00679 Elongation factor G C-terminus FR741_01730 PF00009 Elongation factor Tu GTP binding domain FR741_01735 PF03144 Elongation factor Tu domain 2 FR741_01735 PF03143 Elongation factor Tu C-terminal domain FR741_01735 PF00009 Elongation factor Tu GTP binding domain FR741_01740 PF04324 BFD-like [2Fe-2S] binding domain FR741_01745 PF00210 Ferritin-like domain FR741_01750 PF00390 Malic enzyme, N-terminal domain FR741_01750 PF03949 Malic enzyme, NAD binding domain FR741_01760 PF01053 Cys/Met metabolism PLP-dependent enzyme FR741_01765 PF00742 Homoserine dehydrogenase FR741_01765 PF00696 Amino acid kinase family FR741_01765 PF03447 Homoserine dehydrogenase, NAD binding domain FR741_01770 PF02219 Methylenetetrahydrofolate reductase FR741_01780 PF00311 Phosphoenolpyruvate carboxylase FR741_01785 PF01546 Peptidase family M20/M25/M40 FR741_01785 PF07687 Peptidase dimerisation domain FR741_01790 PF01118 Semialdehyde dehydrogenase, NAD binding domain FR741_01790 PF02774 Semialdehyde dehydrogenase, dimerisation domain FR741_01795 PF00696 Amino acid kinase family FR741_01800 PF00764 Arginosuccinate synthase FR741_01805 PF00583 Acetyltransferase (GNAT) family FR741_01805 PF14698 Argininosuccinate lyase C-terminal FR741_01805 PF00206 Lyase FR741_01820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FR741_01820 PF00403 Heavy-metal-associated domain FR741_01820 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR741_01825 PF00462 Glutaredoxin FR741_01825 PF08534 Redoxin FR741_01835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_01835 PF03466 LysR substrate binding domain FR741_01840 PF00905 Penicillin binding protein transpeptidase domain FR741_01840 PF00912 Transglycosylase FR741_01840 PF17092 Penicillin-binding protein OB-like domain FR741_01865 PF07660 Secretin and TonB N terminus short domain FR741_01865 PF03958 Bacterial type II/III secretion system short domain FR741_01865 PF00263 Bacterial type II and III secretion system protein FR741_01865 PF11741 AMIN domain FR741_01870 PF01202 Shikimate kinase FR741_01875 PF01761 3-dehydroquinate synthase FR741_01885 PF02086 D12 class N6 adenine-specific DNA methyltransferase FR741_01890 PF00834 Ribulose-phosphate 3 epimerase family FR741_01895 PF01250 Ribosomal protein S6 FR741_01900 PF00436 Single-strand binding protein family FR741_01905 PF01084 Ribosomal protein S18 FR741_01910 PF01281 Ribosomal protein L9, N-terminal domain FR741_01910 PF03948 Ribosomal protein L9, C-terminal domain FR741_01920 PF00772 DnaB-like helicase N terminal domain FR741_01920 PF03796 DnaB-like helicase C terminal domain FR741_01925 PF01168 Alanine racemase, N-terminal domain FR741_01925 PF00842 Alanine racemase, C-terminal domain FR741_01930 PF01894 Uncharacterised protein family UPF0047 FR741_01935 PF00342 Phosphoglucose isomerase FR741_01945 PF01475 Ferric uptake regulator family FR741_01950 PF01207 Dihydrouridine synthase (Dus) FR741_01970 PF00667 FAD binding domain FR741_01970 PF00175 Oxidoreductase NAD-binding domain FR741_01970 PF00258 Flavodoxin FR741_01975 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FR741_01975 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FR741_01980 PF01507 Phosphoadenosine phosphosulfate reductase family FR741_02040 PF00999 Sodium/hydrogen exchanger family FR741_02045 PF02965 Vitamin B12 dependent methionine synthase, activation domain FR741_02045 PF02607 B12 binding domain FR741_02045 PF00809 Pterin binding enzyme FR741_02045 PF02574 Homocysteine S-methyltransferase FR741_02045 PF02310 B12 binding domain FR741_02050 PF00696 Amino acid kinase family FR741_02050 PF01842 ACT domain FR741_02060 PF00266 Aminotransferase class-V FR741_02070 PF00005 ABC transporter FR741_02070 PF17755 UvrA DNA-binding domain FR741_02070 PF17760 UvrA interaction domain FR741_02075 PF00483 Nucleotidyl transferase FR741_02080 PF00196 Bacterial regulatory proteins, luxR family FR741_02085 PF00436 Single-strand binding protein family FR741_02115 PF14490 Helix-hairpin-helix containing domain FR741_02115 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FR741_02115 PF13538 UvrD-like helicase C-terminal domain FR741_02145 PF07804 HipA-like C-terminal domain FR741_02145 PF13657 HipA N-terminal domain FR741_02180 PF17157 Gammaproteobacterial periplasmic sensor domain FR741_02180 PF00990 Diguanylate cyclase, GGDEF domain FR741_02180 PF00563 EAL domain FR741_02200 PF00263 Bacterial type II and III secretion system protein FR741_02200 PF03958 Bacterial type II/III secretion system short domain FR741_02205 PF13401 AAA domain FR741_02205 PF01471 Putative peptidoglycan binding domain FR741_02215 PF00437 Type II/IV secretion system protein FR741_02215 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FR741_02220 PF00482 Type II secretion system (T2SS), protein F FR741_02230 PF08334 Type II secretion system (T2SS), protein G FR741_02230 PF07963 Prokaryotic N-terminal methylation motif FR741_02270 PF04085 rod shape-determining protein MreC FR741_02275 PF04093 rod shape-determining protein MreD FR741_02280 PF02545 Maf-like protein FR741_02285 PF10150 Ribonuclease E/G family FR741_02285 PF00575 S1 RNA binding domain FR741_02290 PF13502 AsmA-like C-terminal region FR741_02290 PF13116 Protein of unknown function FR741_02295 PF00795 Carbon-nitrogen hydrolase FR741_02300 PF01523 Putative modulator of DNA gyrase FR741_02305 PF02562 PhoH-like protein FR741_02305 PF13638 PIN domain FR741_02310 PF18337 RapA N-terminal Tudor like domain FR741_02310 PF18339 RapA N-terminal Tudor like domain 1 FR741_02310 PF00271 Helicase conserved C-terminal domain FR741_02310 PF00176 SNF2 family N-terminal domain FR741_02310 PF12137 RNA polymerase recycling family C-terminal FR741_02320 PF00849 RNA pseudouridylate synthase FR741_02325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FR741_02325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FR741_02330 PF04751 Protein of unknown function (DUF615) FR741_02335 PF01523 Putative modulator of DNA gyrase FR741_02340 PF03448 MgtE intracellular N domain FR741_02340 PF01769 Divalent cation transporter FR741_02340 PF00571 CBS domain FR741_02345 PF00381 PTS HPr component phosphorylation site FR741_02350 PF03668 P-loop ATPase protein family FR741_02355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FR741_02360 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FR741_02365 PF04963 Sigma-54 factor, core binding domain FR741_02365 PF04552 Sigma-54, DNA binding domain FR741_02365 PF00309 Sigma-54 factor, Activator interacting domain (AID) FR741_02370 PF00005 ABC transporter FR741_02370 PF12399 Branched-chain amino acid ATP-binding cassette transporter FR741_02375 PF03968 OstA-like protein FR741_02385 PF01380 SIS domain FR741_02385 PF00571 CBS domain FR741_02390 PF01699 Sodium/calcium exchanger protein FR741_02395 PF00005 ABC transporter FR741_02400 PF02405 Permease MlaE FR741_02405 PF02470 MlaD protein FR741_02410 PF05494 MlaC protein FR741_02420 PF01722 BolA-like protein FR741_02425 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FR741_02430 PF01553 Acyltransferase FR741_02435 PF01042 Endoribonuclease L-PSP FR741_02440 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain FR741_02440 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain FR741_02445 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FR741_02445 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FR741_02455 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FR741_02455 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FR741_02465 PF06877 Regulator of ribonuclease activity B FR741_02475 PF00583 Acetyltransferase (GNAT) family FR741_02485 PF08264 Anticodon-binding domain of tRNA FR741_02485 PF00133 tRNA synthetases class I (I, L, M and V) FR741_02485 PF10458 Valyl tRNA synthetase tRNA binding arm FR741_02490 PF04364 DNA polymerase III chi subunit, HolC FR741_02495 PF02789 Cytosol aminopeptidase family, N-terminal domain FR741_02495 PF00883 Cytosol aminopeptidase family, catalytic domain FR741_02500 PF03739 Lipopolysaccharide export system permease LptF/LptG FR741_02505 PF03739 Lipopolysaccharide export system permease LptF/LptG FR741_02515 PF10011 Predicted membrane protein (DUF2254) FR741_02530 PF01522 Polysaccharide deacetylase FR741_02535 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FR741_02540 PF02378 Phosphotransferase system, EIIC FR741_02545 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FR741_02550 PF11975 Family 4 glycosyl hydrolase C-terminal domain FR741_02550 PF02056 Family 4 glycosyl hydrolase FR741_02555 PF04794 YdjC-like protein FR741_02560 PF00356 Bacterial regulatory proteins, lacI family FR741_02560 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FR741_02615 PF00171 Aldehyde dehydrogenase family FR741_02645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FR741_02645 PF17200 Single Cache domain 2 FR741_02645 PF00672 HAMP domain FR741_02685 PF01464 Transglycosylase SLT domain FR741_02685 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain FR741_02690 PF04362 Bacterial Fe(2+) trafficking FR741_02695 PF00633 Helix-hairpin-helix motif FR741_02695 PF00730 HhH-GPD superfamily base excision DNA repair protein FR741_02695 PF14815 NUDIX domain FR741_02700 PF02390 Putative methyltransferase FR741_02705 PF02086 D12 class N6 adenine-specific DNA methyltransferase FR741_02710 PF04960 Glutaminase FR741_02715 PF06969 HemN C-terminal domain FR741_02715 PF04055 Radical SAM superfamily FR741_02720 PF01725 Ham1 family FR741_02730 PF02594 Uncharacterised ACR, YggU family COG1872 FR741_02735 PF02325 YGGT family FR741_02740 PF03807 NADP oxidoreductase coenzyme F420-dependent FR741_02740 PF14748 Pyrroline-5-carboxylate reductase dimerisation FR741_02745 PF01168 Alanine racemase, N-terminal domain FR741_02750 PF00437 Type II/IV secretion system protein FR741_02755 PF00437 Type II/IV secretion system protein FR741_02760 PF03652 Holliday junction resolvase FR741_02765 PF02622 Uncharacterized ACR, COG1678 FR741_02770 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FR741_02770 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FR741_02775 PF04452 RNA methyltransferase FR741_02780 PF04231 Endonuclease I FR741_02785 PF17283 SprT-like zinc ribbon domain FR741_02785 PF10263 SprT-like family FR741_02795 PF02772 S-adenosylmethionine synthetase, central domain FR741_02795 PF00438 S-adenosylmethionine synthetase, N-terminal domain FR741_02795 PF02773 S-adenosylmethionine synthetase, C-terminal domain FR741_02805 PF00456 Transketolase, thiamine diphosphate binding domain FR741_02805 PF02779 Transketolase, pyrimidine binding domain FR741_02805 PF02780 Transketolase, C-terminal domain FR741_02810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_02810 PF03466 LysR substrate binding domain FR741_02815 PF00593 TonB dependent receptor FR741_02815 PF07715 TonB-dependent Receptor Plug Domain FR741_02820 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FR741_02820 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FR741_02825 PF00162 Phosphoglycerate kinase FR741_02830 PF01116 Fructose-bisphosphate aldolase class-II FR741_02835 PF00924 Mechanosensitive ion channel FR741_02835 PF05552 Conserved TM helix FR741_02845 PF01810 LysE type translocator FR741_02850 PF03466 LysR substrate binding domain FR741_02850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_02855 PF04402 Protein of unknown function (DUF541) FR741_02860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FR741_02860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FR741_02860 PF01842 ACT domain FR741_02865 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FR741_02870 PF01812 5-formyltetrahydrofolate cyclo-ligase family FR741_02880 PF05164 Cell division protein ZapA FR741_02890 PF03695 Uncharacterised protein family (UPF0149) FR741_02895 PF01494 FAD binding domain FR741_02900 PF01494 FAD binding domain FR741_02915 PF01571 Aminomethyltransferase folate-binding domain FR741_02920 PF03937 Flavinator of succinate dehydrogenase FR741_02930 PF02910 Fumarate reductase flavoprotein C-term FR741_02930 PF00890 FAD binding domain FR741_02940 PF08281 Sigma-70, region 4 FR741_02940 PF04542 Sigma-70 region 2 FR741_02945 PF03873 Anti sigma-E protein RseA, C-terminal domain FR741_02945 PF03872 Anti sigma-E protein RseA, N-terminal domain FR741_02950 PF03888 MucB/RseB N-terminal domain FR741_02950 PF17188 MucB/RseB C-terminal domain FR741_02960 PF00679 Elongation factor G C-terminus FR741_02960 PF00009 Elongation factor Tu GTP binding domain FR741_02960 PF06421 GTP-binding protein LepA C-terminus FR741_02960 PF03144 Elongation factor Tu domain 2 FR741_02965 PF10502 Signal peptidase, peptidase S26 FR741_02970 PF00035 Double-stranded RNA binding motif FR741_02970 PF14622 Ribonuclease-III-like FR741_02975 PF07650 KH domain FR741_02975 PF01926 50S ribosome-binding GTPase FR741_02980 PF11967 Recombination protein O N terminal FR741_02980 PF02565 Recombination protein O C terminal FR741_02985 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FR741_02990 PF01648 4'-phosphopantetheinyl transferase superfamily FR741_02995 PF01627 Hpt domain FR741_02995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_02995 PF00672 HAMP domain FR741_02995 PF00512 His Kinase A (phospho-acceptor) domain FR741_02995 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FR741_02995 PF00072 Response regulator receiver domain FR741_03005 PF05958 tRNA (Uracil-5-)-methyltransferase FR741_03005 PF01938 TRAM domain FR741_03015 PF04607 Region found in RelA / SpoT proteins FR741_03015 PF02824 TGS domain FR741_03015 PF13291 ACT domain FR741_03020 PF03819 MazG nucleotide pyrophosphohydrolase domain FR741_03025 PF00117 Glutamine amidotransferase class-I FR741_03025 PF06418 CTP synthase N-terminus FR741_03030 PF03952 Enolase, N-terminal domain FR741_03030 PF00113 Enolase, C-terminal TIM barrel domain FR741_03035 PF04977 Septum formation initiator FR741_03040 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FR741_03045 PF02542 YgbB family FR741_03050 PF01142 tRNA pseudouridine synthase D (TruD) FR741_03055 PF01975 Survival protein SurE FR741_03065 PF01476 LysM domain FR741_03065 PF01551 Peptidase family M23 FR741_03070 PF04542 Sigma-70 region 2 FR741_03070 PF04545 Sigma-70, region 4 FR741_03070 PF04539 Sigma-70 region 3 FR741_03070 PF00140 Sigma-70 factor, region 1.2 FR741_03075 PF00488 MutS domain V FR741_03075 PF05190 MutS family domain IV FR741_03075 PF01624 MutS domain I FR741_03075 PF05192 MutS domain III FR741_03075 PF05188 MutS domain II FR741_03080 PF02464 Competence-damaged protein FR741_03085 PF00154 recA bacterial DNA recombination protein FR741_03090 PF02631 RecX family FR741_03095 PF02272 DHHA1 domain FR741_03095 PF01411 tRNA synthetases class II (A) FR741_03095 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FR741_03100 PF01842 ACT domain FR741_03100 PF00696 Amino acid kinase family FR741_03100 PF13840 ACT domain FR741_03105 PF02599 Global regulator protein family FR741_03165 PF04277 Oxaloacetate decarboxylase, gamma chain FR741_03170 PF02436 Conserved carboxylase domain FR741_03170 PF00682 HMGL-like FR741_03170 PF00364 Biotin-requiring enzyme FR741_03175 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit FR741_03185 PF09335 SNARE associated Golgi protein FR741_03190 PF05193 Peptidase M16 inactive domain FR741_03190 PF00675 Insulinase (Peptidase family M16) FR741_03195 PF04262 Glutamate-cysteine ligase FR741_03205 PF02664 S-Ribosylhomocysteinase (LuxS) FR741_03210 PF03471 Transporter associated domain FR741_03210 PF01595 Cyclin M transmembrane N-terminal domain FR741_03210 PF00571 CBS domain FR741_03215 PF01578 Cytochrome C assembly protein FR741_03220 PF00448 SRP54-type protein, GTPase domain FR741_03220 PF02978 Signal peptide binding domain FR741_03220 PF02881 SRP54-type protein, helical bundle domain FR741_03225 PF00886 Ribosomal protein S16 FR741_03230 PF01782 RimM N-terminal domain FR741_03230 PF05239 PRC-barrel domain FR741_03235 PF01746 tRNA (Guanine-1)-methyltransferase FR741_03240 PF01245 Ribosomal protein L19 FR741_03245 PF03884 DNA gyrase inhibitor YacG FR741_03250 PF07072 Cell division protein FR741_03255 PF01121 Dephospho-CoA kinase FR741_03260 PF01478 Type IV leader peptidase family FR741_03260 PF06750 Bacterial Peptidase A24 N-terminal domain FR741_03265 PF00482 Type II secretion system (T2SS), protein F FR741_03270 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FR741_03270 PF00437 Type II/IV secretion system protein FR741_03275 PF00114 Pilin (bacterial filament) FR741_03275 PF07963 Prokaryotic N-terminal methylation motif FR741_03285 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FR741_03285 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FR741_03290 PF01510 N-acetylmuramoyl-L-alanine amidase FR741_03295 PF00392 Bacterial regulatory proteins, gntR family FR741_03295 PF07729 FCD domain FR741_03300 PF17831 Pyruvate dehydrogenase E1 component middle domain FR741_03300 PF00456 Transketolase, thiamine diphosphate binding domain FR741_03305 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FR741_03305 PF02817 e3 binding domain FR741_03305 PF00364 Biotin-requiring enzyme FR741_03310 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR741_03310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FR741_03315 PF00440 Bacterial regulatory proteins, tetR family FR741_03320 PF00156 Phosphoribosyl transferase domain FR741_03325 PF00484 Carbonic anhydrase FR741_03330 PF01740 STAS domain FR741_03330 PF00916 Sulfate permease family FR741_03335 PF00005 ABC transporter FR741_03340 PF01061 ABC-2 type transporter FR741_03350 PF03279 Bacterial lipid A biosynthesis acyltransferase FR741_03355 PF02569 Pantoate-beta-alanine ligase FR741_03360 PF02548 Ketopantoate hydroxymethyltransferase FR741_03365 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FR741_03370 PF12627 Probable RNA and SrmB- binding site of polymerase A FR741_03370 PF01743 Poly A polymerase head domain FR741_03370 PF12626 Polymerase A arginine-rich C-terminus FR741_03375 PF00749 tRNA synthetases class I (E and Q), catalytic domain FR741_03380 PF01258 Prokaryotic dksA/traR C4-type zinc finger FR741_03385 PF17746 SfsA N-terminal OB domain FR741_03385 PF03749 Sugar fermentation stimulation protein RE domain FR741_03390 PF04408 Helicase associated domain (HA2) FR741_03390 PF00271 Helicase conserved C-terminal domain FR741_03390 PF08482 ATP-dependent helicase C-terminal FR741_03390 PF00270 DEAD/DEAH box helicase FR741_03395 PF00912 Transglycosylase FR741_03395 PF00905 Penicillin binding protein transpeptidase domain FR741_03395 PF14814 Bifunctional transglycosylase second domain FR741_03400 PF01734 Patatin-like phospholipase FR741_03405 PF11791 Aconitate B N-terminal domain FR741_03405 PF06434 Aconitate hydratase 2 N-terminus FR741_03405 PF00330 Aconitase family (aconitate hydratase) FR741_03410 PF06062 Uncharacterised protein family (UPF0231) FR741_03415 PF00543 Nitrogen regulatory protein P-II FR741_03420 PF00909 Ammonium Transporter Family FR741_03425 PF13416 Bacterial extracellular solute-binding protein FR741_03435 PF08402 TOBE domain FR741_03435 PF00005 ABC transporter FR741_03440 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FR741_03440 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FR741_03440 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FR741_03440 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FR741_03445 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FR741_03445 PF06165 Glycosyltransferase family 36 FR741_03450 PF02838 Glycosyl hydrolase family 20, domain 2 FR741_03450 PF00728 Glycosyl hydrolase family 20, catalytic domain FR741_03455 PF01869 BadF/BadG/BcrA/BcrD ATPase family FR741_03465 PF00005 ABC transporter FR741_03465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR741_03470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR741_03470 PF00005 ABC transporter FR741_03480 PF00528 Binding-protein-dependent transport system inner membrane component FR741_03485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR741_03490 PF00512 His Kinase A (phospho-acceptor) domain FR741_03490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_03490 PF00072 Response regulator receiver domain FR741_03490 PF09308 LuxQ, periplasmic FR741_03495 PF05175 Methyltransferase small domain FR741_03495 PF08468 Methyltransferase small domain N-terminal FR741_03500 PF01594 AI-2E family transporter FR741_03505 PF00202 Aminotransferase class-III FR741_03510 PF01521 Iron-sulphur cluster biosynthesis FR741_03520 PF00873 AcrB/AcrD/AcrF family FR741_03525 PF01551 Peptidase family M23 FR741_03525 PF01476 LysM domain FR741_03525 PF08525 Opacity-associated protein A N-terminal motif FR741_03530 PF00579 tRNA synthetases class I (W and Y) FR741_03540 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family FR741_03545 PF13609 Gram-negative porin FR741_03550 PF03449 Transcription elongation factor, N-terminal FR741_03550 PF01272 Transcription elongation factor, GreA/GreB, C-term FR741_03555 PF01985 CRS1 / YhbY (CRM) domain FR741_03560 PF01728 FtsJ-like methyltransferase FR741_03565 PF01434 Peptidase family M41 FR741_03565 PF00004 ATPase family associated with various cellular activities (AAA) FR741_03565 PF06480 FtsH Extracellular FR741_03565 PF17862 AAA+ lid domain FR741_03570 PF00809 Pterin binding enzyme FR741_03575 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FR741_03575 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FR741_03575 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FR741_03575 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FR741_03585 PF03840 Preprotein translocase SecG subunit FR741_03600 PF17384 RimP C-terminal SH3 domain FR741_03600 PF02576 RimP N-terminal domain FR741_03605 PF00575 S1 RNA binding domain FR741_03605 PF13184 NusA-like KH domain FR741_03605 PF08529 NusA N-terminal domain FR741_03610 PF11987 Translation-initiation factor 2 FR741_03610 PF04760 Translation initiation factor IF-2, N-terminal region FR741_03610 PF08364 Bacterial translation initiation factor IF-2 associated region FR741_03610 PF00009 Elongation factor Tu GTP binding domain FR741_03615 PF02033 Ribosome-binding factor A FR741_03620 PF09157 Pseudouridine synthase II TruB, C-terminal FR741_03620 PF01509 TruB family pseudouridylate synthase (N terminal domain) FR741_03620 PF16198 tRNA pseudouridylate synthase B C-terminal domain FR741_03625 PF00312 Ribosomal protein S15 FR741_03630 PF00575 S1 RNA binding domain FR741_03630 PF03725 3' exoribonuclease family, domain 2 FR741_03630 PF01138 3' exoribonuclease family, domain 1 FR741_03630 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FR741_03630 PF00013 KH domain FR741_03635 PF13181 Tetratricopeptide repeat FR741_03635 PF07719 Tetratricopeptide repeat FR741_03645 PF01554 MatE FR741_03650 PF01136 Peptidase family U32 FR741_03655 PF01136 Peptidase family U32 FR741_03660 PF03707 Bacterial signalling protein N terminal repeat FR741_03660 PF00563 EAL domain FR741_03660 PF00990 Diguanylate cyclase, GGDEF domain FR741_03670 PF02036 SCP-2 sterol transfer family FR741_03675 PF13508 Acetyltransferase (GNAT) domain FR741_03695 PF16658 Class II release factor RF3, C-terminal domain FR741_03695 PF03144 Elongation factor Tu domain 2 FR741_03695 PF00009 Elongation factor Tu GTP binding domain FR741_03705 PF01026 TatD related DNase FR741_03710 PF01773 Na+ dependent nucleoside transporter N-terminus FR741_03710 PF07662 Na+ dependent nucleoside transporter C-terminus FR741_03710 PF07670 Nucleoside recognition FR741_03720 PF01791 DeoC/LacD family aldolase FR741_03725 PF02885 Glycosyl transferase family, helical bundle domain FR741_03725 PF00591 Glycosyl transferase family, a/b domain FR741_03725 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FR741_03730 PF01676 Metalloenzyme superfamily FR741_03735 PF01048 Phosphorylase superfamily FR741_03745 PF18429 Domain of unknown function (DUF5609) FR741_03755 PF18073 Rubredoxin metal binding domain FR741_03760 PF00679 Elongation factor G C-terminus FR741_03760 PF03144 Elongation factor Tu domain 2 FR741_03760 PF00009 Elongation factor Tu GTP binding domain FR741_03760 PF03764 Elongation factor G, domain IV FR741_03760 PF14492 Elongation Factor G, domain II FR741_03765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_03765 PF03466 LysR substrate binding domain FR741_03775 PF00501 AMP-binding enzyme FR741_03780 PF02805 Metal binding domain of Ada FR741_03780 PF12833 Helix-turn-helix domain FR741_03805 PF04972 BON domain FR741_03805 PF13629 Pilus formation protein N terminal region FR741_03805 PF00263 Bacterial type II and III secretion system protein FR741_03835 PF00437 Type II/IV secretion system protein FR741_03865 PF03466 LysR substrate binding domain FR741_03865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_03870 PF13520 Amino acid permease FR741_03875 PF04074 YhcH/YjgK/YiaL FR741_03880 PF02929 Beta galactosidase small chain FR741_03880 PF00703 Glycosyl hydrolases family 2 FR741_03880 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FR741_03880 PF02837 Glycosyl hydrolases family 2, sugar binding domain FR741_03880 PF16353 Domain of unknown function(DUF4981) FR741_03885 PF00356 Bacterial regulatory proteins, lacI family FR741_03895 PF16363 GDP-mannose 4,6 dehydratase FR741_03900 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FR741_03900 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FR741_03905 PF10509 Galactokinase galactose-binding signature FR741_03905 PF00288 GHMP kinases N terminal domain FR741_03905 PF08544 GHMP kinases C terminal FR741_03910 PF01263 Aldose 1-epimerase FR741_03915 PF00356 Bacterial regulatory proteins, lacI family FR741_03930 PF00356 Bacterial regulatory proteins, lacI family FR741_03935 PF01588 Putative tRNA binding domain FR741_03950 PF01544 CorA-like Mg2+ transporter protein FR741_03955 PF01266 FAD dependent oxidoreductase FR741_03955 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FR741_03960 PF00455 DeoR C terminal sensor domain FR741_03960 PF08220 DeoR-like helix-turn-helix domain FR741_03965 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FR741_03965 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FR741_03970 PF00230 Major intrinsic protein FR741_03980 PF07690 Major Facilitator Superfamily FR741_03985 PF03009 Glycerophosphoryl diester phosphodiesterase family FR741_03990 PF14602 Hexapeptide repeat of succinyl-transferase FR741_03990 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle FR741_03995 PF07130 YebG protein FR741_04000 PF03466 LysR substrate binding domain FR741_04000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_04010 PF11893 Domain of unknown function (DUF3413) FR741_04010 PF00884 Sulfatase FR741_04015 PF17946 RecC C-terminal domain FR741_04025 PF13361 UvrD-like helicase C-terminal domain FR741_04025 PF00580 UvrD/REP helicase N-terminal domain FR741_04025 PF12705 PD-(D/E)XK nuclease superfamily FR741_04030 PF13538 UvrD-like helicase C-terminal domain FR741_04040 PF00583 Acetyltransferase (GNAT) family FR741_04040 PF00696 Amino acid kinase family FR741_04055 PF03562 MltA specific insert domain FR741_04055 PF06725 3D domain FR741_04060 PF00899 ThiF family FR741_04065 PF02657 Fe-S metabolism associated domain FR741_04070 PF00990 Diguanylate cyclase, GGDEF domain FR741_04070 PF17158 Membrane-associated sensor, integral membrane domain FR741_04075 PF00266 Aminotransferase class-V FR741_04080 PF01965 DJ-1/PfpI family FR741_04085 PF08546 Ketopantoate reductase PanE/ApbA C terminal FR741_04085 PF02558 Ketopantoate reductase PanE/ApbA FR741_04090 PF03502 Nucleoside-specific channel-forming protein, Tsx FR741_04110 PF04542 Sigma-70 region 2 FR741_04110 PF04545 Sigma-70, region 4 FR741_04120 PF07690 Major Facilitator Superfamily FR741_04125 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FR741_04130 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FR741_04130 PF03923 Uncharacterized lipoprotein FR741_04135 PF05175 Methyltransferase small domain FR741_04140 PF01722 BolA-like protein FR741_04145 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) FR741_04145 PF11973 NQRA C-terminal domain FR741_04150 PF03116 NQR2, RnfD, RnfE family FR741_04155 PF04205 FMN-binding domain FR741_04160 PF02508 Rnf-Nqr subunit, membrane protein FR741_04165 PF02508 Rnf-Nqr subunit, membrane protein FR741_04170 PF00970 Oxidoreductase FAD-binding domain FR741_04170 PF00111 2Fe-2S iron-sulfur cluster binding domain FR741_04170 PF00175 Oxidoreductase NAD-binding domain FR741_04175 PF02424 ApbE family FR741_04190 PF00817 impB/mucB/samB family FR741_04190 PF11799 impB/mucB/samB family C-terminal domain FR741_04190 PF11798 IMS family HHH motif FR741_04195 PF00270 DEAD/DEAH box helicase FR741_04195 PF00570 HRDC domain FR741_04195 PF09382 RQC domain FR741_04195 PF16124 RecQ zinc-binding FR741_04195 PF00271 Helicase conserved C-terminal domain FR741_04210 PF06483 Chitinase C FR741_04210 PF00704 Glycosyl hydrolases family 18 FR741_04215 PF00209 Sodium:neurotransmitter symporter family FR741_04225 PF06786 Uncharacterised protein family (UPF0253) FR741_04235 PF04073 Aminoacyl-tRNA editing domain FR741_04235 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FR741_04235 PF03129 Anticodon binding domain FR741_04240 PF01980 tRNA-methyltransferase O FR741_04240 PF18389 TrmO C-terminal domain FR741_04245 PF01197 Ribosomal protein L31 FR741_04250 PF00444 Ribosomal protein L36 FR741_04255 PF03806 AbgT putative transporter family FR741_04280 PF01370 NAD dependent epimerase/dehydratase family FR741_04285 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FR741_04285 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FR741_04290 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FR741_04315 PF00849 RNA pseudouridylate synthase FR741_04315 PF04287 tRNA pseudouridine synthase C FR741_04320 PF00849 RNA pseudouridylate synthase FR741_04325 PF11944 Protein of unknown function (DUF3461) FR741_04330 PF08335 GlnD PII-uridylyltransferase FR741_04330 PF01909 Nucleotidyltransferase domain FR741_04330 PF01966 HD domain FR741_04330 PF01842 ACT domain FR741_04335 PF00557 Metallopeptidase family M24 FR741_04340 PF00318 Ribosomal protein S2 FR741_04345 PF00889 Elongation factor TS FR741_04350 PF00696 Amino acid kinase family FR741_04355 PF01765 Ribosome recycling factor FR741_04360 PF01255 Putative undecaprenyl diphosphate synthase FR741_04370 PF13288 DXP reductoisomerase C-terminal domain FR741_04370 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FR741_04370 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FR741_04375 PF02163 Peptidase family M50 FR741_04375 PF17820 PDZ domain FR741_04380 PF01103 Surface antigen FR741_04380 PF07244 Surface antigen variable number repeat FR741_04385 PF03938 Outer membrane protein (OmpH-like) FR741_04390 PF00132 Bacterial transferase hexapeptide (six repeats) FR741_04390 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FR741_04395 PF07977 FabA-like domain FR741_04400 PF00132 Bacterial transferase hexapeptide (six repeats) FR741_04400 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FR741_04405 PF02684 Lipid-A-disaccharide synthetase FR741_04410 PF01351 Ribonuclease HII FR741_04415 PF07733 Bacterial DNA polymerase III alpha NTPase domain FR741_04415 PF02811 PHP domain FR741_04415 PF01336 OB-fold nucleic acid binding domain FR741_04415 PF14579 Helix-hairpin-helix motif FR741_04415 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FR741_04420 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FR741_04425 PF09179 TilS substrate binding domain FR741_04425 PF11734 TilS substrate C-terminal domain FR741_04425 PF01171 PP-loop family FR741_04430 PF00034 Cytochrome c FR741_04435 PF00543 Nitrogen regulatory protein P-II FR741_04440 PF03372 Endonuclease/Exonuclease/phosphatase family FR741_04450 PF01464 Transglycosylase SLT domain FR741_04450 PF01476 LysM domain FR741_04455 PF00753 Metallo-beta-lactamase superfamily FR741_04455 PF16123 Hydroxyacylglutathione hydrolase C-terminus FR741_04460 PF08241 Methyltransferase domain FR741_04465 PF00075 RNase H FR741_04470 PF00929 Exonuclease FR741_04500 PF00916 Sulfate permease family FR741_04500 PF01740 STAS domain FR741_04505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FR741_04505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FR741_04505 PF09317 Domain of unknown function (DUF1974) FR741_04505 PF02770 Acyl-CoA dehydrogenase, middle domain FR741_04515 PF13230 Glutamine amidotransferases class-II FR741_04520 PF00551 Formyl transferase FR741_04525 PF02769 AIR synthase related protein, C-terminal domain FR741_04525 PF00586 AIR synthase related protein, N-terminal domain FR741_04535 PF00860 Permease family FR741_04555 PF13181 Tetratricopeptide repeat FR741_04555 PF01435 Peptidase family M48 FR741_04565 PF01594 AI-2E family transporter FR741_04570 PF00578 AhpC/TSA family FR741_04580 PF00701 Dihydrodipicolinate synthetase family FR741_04600 PF01546 Peptidase family M20/M25/M40 FR741_04600 PF07687 Peptidase dimerisation domain FR741_04605 PF03960 ArsC family FR741_04625 PF11143 Protein of unknown function (DUF2919) FR741_04630 PF04261 Dyp-type peroxidase family FR741_04635 PF00669 Bacterial flagellin N-terminal helical region FR741_04635 PF00700 Bacterial flagellin C-terminal helical region FR741_04635 PF07196 Flagellin hook IN motif FR741_04645 PF00700 Bacterial flagellin C-terminal helical region FR741_04645 PF07196 Flagellin hook IN motif FR741_04645 PF00669 Bacterial flagellin N-terminal helical region FR741_04650 PF00669 Bacterial flagellin N-terminal helical region FR741_04650 PF00700 Bacterial flagellin C-terminal helical region FR741_04650 PF07196 Flagellin hook IN motif FR741_04655 PF03646 FlaG protein FR741_04660 PF02465 Flagellar hook-associated protein 2 N-terminus FR741_04660 PF07195 Flagellar hook-associated protein 2 C-terminus FR741_04660 PF07196 Flagellin hook IN motif FR741_04670 PF02561 Flagellar protein FliS FR741_04675 PF02954 Bacterial regulatory protein, Fis family FR741_04675 PF06490 Flagellar regulatory protein FleQ FR741_04675 PF00158 Sigma-54 interaction domain FR741_04680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_04680 PF00512 His Kinase A (phospho-acceptor) domain FR741_04685 PF02954 Bacterial regulatory protein, Fis family FR741_04685 PF00158 Sigma-54 interaction domain FR741_04685 PF00072 Response regulator receiver domain FR741_04690 PF02049 Flagellar hook-basal body complex protein FliE FR741_04695 PF01514 Secretory protein of YscJ/FliF family FR741_04695 PF08345 Flagellar M-ring protein C-terminal FR741_04700 PF14841 FliG middle domain FR741_04700 PF01706 FliG C-terminal domain FR741_04700 PF14842 FliG N-terminal domain FR741_04710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FR741_04710 PF18269 T3SS EscN ATPase C-terminal domain FR741_04730 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FR741_04730 PF02154 Flagellar motor switch protein FliM FR741_04735 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FR741_04740 PF04347 Flagellar biosynthesis protein, FliO FR741_04745 PF00813 FliP family FR741_04750 PF01313 Bacterial export proteins, family 3 FR741_04755 PF01311 Bacterial export proteins, family 1 FR741_04760 PF01312 FlhB HrpN YscU SpaS Family FR741_04765 PF00771 FHIPEP family FR741_04770 PF00448 SRP54-type protein, GTPase domain FR741_04775 PF10609 NUBPL iron-transfer P-loop NTPase FR741_04780 PF04545 Sigma-70, region 4 FR741_04780 PF04539 Sigma-70 region 3 FR741_04780 PF04542 Sigma-70 region 2 FR741_04785 PF00072 Response regulator receiver domain FR741_04790 PF04344 Chemotaxis phosphatase, CheZ FR741_04795 PF02895 Signal transducing histidine kinase, homodimeric domain FR741_04795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_04795 PF01627 Hpt domain FR741_04795 PF00072 Response regulator receiver domain FR741_04795 PF01584 CheW-like domain FR741_04800 PF00072 Response regulator receiver domain FR741_04800 PF01339 CheB methylesterase FR741_04805 PF13614 AAA domain FR741_04815 PF01584 CheW-like domain FR741_04825 PF00005 ABC transporter FR741_04830 PF03379 CcmB protein FR741_04835 PF01578 Cytochrome C assembly protein FR741_04840 PF04995 Heme exporter protein D (CcmD) FR741_04845 PF03100 CcmE FR741_04850 PF01578 Cytochrome C assembly protein FR741_04850 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FR741_04855 PF08534 Redoxin FR741_04860 PF03918 Cytochrome C biogenesis protein FR741_04870 PF04333 MlaA lipoprotein FR741_04875 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FR741_04880 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FR741_04890 PF04542 Sigma-70 region 2 FR741_04890 PF08281 Sigma-70, region 4 FR741_04895 PF00108 Thiolase, N-terminal domain FR741_04895 PF02803 Thiolase, C-terminal domain FR741_04900 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FR741_04900 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FR741_04900 PF00378 Enoyl-CoA hydratase/isomerase FR741_04910 PF16187 Middle or third domain of peptidase_M16 FR741_04910 PF05193 Peptidase M16 inactive domain FR741_04910 PF00675 Insulinase (Peptidase family M16) FR741_04915 PF00300 Histidine phosphatase superfamily (branch 1) FR741_04920 PF01713 Smr domain FR741_04925 PF05175 Methyltransferase small domain FR741_04930 PF01264 Chorismate synthase FR741_04935 PF03458 UPF0126 domain FR741_04945 PF04315 Elongation factor P hydroxylase FR741_04950 PF08891 YfcL protein FR741_04960 PF03358 NADPH-dependent FMN reductase FR741_04965 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FR741_04965 PF01266 FAD dependent oxidoreductase FR741_04970 PF00109 Beta-ketoacyl synthase, N-terminal domain FR741_04970 PF02801 Beta-ketoacyl synthase, C-terminal domain FR741_04980 PF11890 Domain of unknown function (DUF3410) FR741_04980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FR741_04980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FR741_04985 PF02774 Semialdehyde dehydrogenase, dimerisation domain FR741_04985 PF01118 Semialdehyde dehydrogenase, NAD binding domain FR741_04995 PF01416 tRNA pseudouridine synthase FR741_05005 PF01039 Carboxyl transferase domain FR741_05005 PF17848 Acetyl-coA carboxylase zinc finger domain FR741_05010 PF08245 Mur ligase middle domain FR741_05010 PF02875 Mur ligase family, glutamate ligase domain FR741_05015 PF05036 Sporulation related domain FR741_05020 PF02674 Colicin V production protein FR741_05025 PF00156 Phosphoribosyl transferase domain FR741_05030 PF03466 LysR substrate binding domain FR741_05030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_05035 PF00072 Response regulator receiver domain FR741_05045 PF04304 Protein of unknown function (DUF454) FR741_05050 PF00156 Phosphoribosyl transferase domain FR741_05055 PF12169 DNA polymerase III subunits gamma and tau domain III FR741_05055 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FR741_05055 PF12170 DNA polymerase III tau subunit V interacting with alpha FR741_05060 PF02575 YbaB/EbfC DNA-binding family FR741_05065 PF02132 RecR protein FR741_05065 PF13662 Toprim domain FR741_05080 PF00230 Major intrinsic protein FR741_05090 PF01042 Endoribonuclease L-PSP FR741_05095 PF03313 Serine dehydratase alpha chain FR741_05105 PF03692 Putative zinc- or iron-chelating domain FR741_05110 PF04226 Transglycosylase associated protein FR741_05115 PF03692 Putative zinc- or iron-chelating domain FR741_05120 PF05552 Conserved TM helix FR741_05120 PF00924 Mechanosensitive ion channel FR741_05125 PF03992 Antibiotic biosynthesis monooxygenase FR741_05130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FR741_05140 PF00245 Alkaline phosphatase FR741_05160 PF13847 Methyltransferase domain FR741_05165 PF00672 HAMP domain FR741_05165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FR741_05165 PF02743 Cache domain FR741_05170 PF01263 Aldose 1-epimerase FR741_05175 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FR741_05175 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FR741_05180 PF01641 SelR domain FR741_05190 PF07023 Protein of unknown function (DUF1315) FR741_05195 PF00710 Asparaginase, N-terminal FR741_05195 PF17763 Glutaminase/Asparaginase C-terminal domain FR741_05200 PF01343 Peptidase family S49 FR741_05205 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR741_05205 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FR741_05215 PF00881 Nitroreductase family FR741_05220 PF01751 Toprim domain FR741_05220 PF01131 DNA topoisomerase FR741_05230 PF00106 short chain dehydrogenase FR741_05235 PF00850 Histone deacetylase domain FR741_05245 PF00884 Sulfatase FR741_05245 PF11893 Domain of unknown function (DUF3413) FR741_05250 PF07208 Protein of unknown function (DUF1414) FR741_05255 PF04245 37-kD nucleoid-associated bacterial protein FR741_05270 PF03553 Na+/H+ antiporter family FR741_05275 PF01118 Semialdehyde dehydrogenase, NAD binding domain FR741_05275 PF02774 Semialdehyde dehydrogenase, dimerisation domain FR741_05280 PF00520 Ion transport protein FR741_05280 PF00027 Cyclic nucleotide-binding domain FR741_05285 PF01914 MarC family integral membrane protein FR741_05290 PF00171 Aldehyde dehydrogenase family FR741_05290 PF00465 Iron-containing alcohol dehydrogenase FR741_05305 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FR741_05305 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FR741_05310 PF00462 Glutaredoxin FR741_05320 PF03553 Na+/H+ antiporter family FR741_05320 PF13726 Na+-H+ antiporter family FR741_05325 PF00929 Exonuclease FR741_05335 PF18393 MotY N-terminal domain FR741_05335 PF00691 OmpA family FR741_05340 PF10952 Protein of unknown function (DUF2753) FR741_05345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FR741_05350 PF00730 HhH-GPD superfamily base excision DNA repair protein FR741_05350 PF00633 Helix-hairpin-helix motif FR741_05350 PF10576 Iron-sulfur binding domain of endonuclease III FR741_05355 PF02508 Rnf-Nqr subunit, membrane protein FR741_05360 PF04205 FMN-binding domain FR741_05365 PF03116 NQR2, RnfD, RnfE family FR741_05370 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FR741_05370 PF12838 4Fe-4S dicluster domain FR741_05370 PF13375 RnfC Barrel sandwich hybrid domain FR741_05370 PF10531 SLBB domain FR741_05375 PF04060 Putative Fe-S cluster FR741_05380 PF02508 Rnf-Nqr subunit, membrane protein FR741_05390 PF17757 UvrB interaction domain FR741_05390 PF12344 Ultra-violet resistance protein B FR741_05390 PF02151 UvrB/uvrC motif FR741_05390 PF04851 Type III restriction enzyme, res subunit FR741_05390 PF00271 Helicase conserved C-terminal domain FR741_05395 PF02954 Bacterial regulatory protein, Fis family FR741_05395 PF00072 Response regulator receiver domain FR741_05395 PF00158 Sigma-54 interaction domain FR741_05400 PF01627 Hpt domain FR741_05405 PF01933 Uncharacterised protein family UPF0052 FR741_05410 PF04055 Radical SAM superfamily FR741_05410 PF06463 Molybdenum Cofactor Synthesis C FR741_05415 PF00994 Probable molybdopterin binding domain FR741_05420 PF01967 MoaC family FR741_05425 PF02597 ThiS family FR741_05430 PF02391 MoaE protein FR741_05435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR741_05440 PF00528 Binding-protein-dependent transport system inner membrane component FR741_05445 PF12911 N-terminal TM domain of oligopeptide transport permease C FR741_05445 PF00528 Binding-protein-dependent transport system inner membrane component FR741_05450 PF00005 ABC transporter FR741_05450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR741_05455 PF00005 ABC transporter FR741_05455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR741_05460 PF13409 Glutathione S-transferase, N-terminal domain FR741_05470 PF13194 Domain of unknown function (DUF4010) FR741_05475 PF01515 Phosphate acetyl/butaryl transferase FR741_05475 PF07085 DRTGG domain FR741_05480 PF00871 Acetokinase family FR741_05485 PF04217 Protein of unknown function, DUF412 FR741_05495 PF02653 Branched-chain amino acid transport system / permease component FR741_05500 PF00005 ABC transporter FR741_05505 PF02903 Alpha amylase, N-terminal ig-like domain FR741_05505 PF00128 Alpha amylase, catalytic domain FR741_05510 PF00990 Diguanylate cyclase, GGDEF domain FR741_05510 PF17158 Membrane-associated sensor, integral membrane domain FR741_05515 PF01207 Dihydrouridine synthase (Dus) FR741_05520 PF01043 SecA preprotein cross-linking domain FR741_05520 PF07517 SecA DEAD-like domain FR741_05520 PF02810 SEC-C motif FR741_05520 PF07516 SecA Wing and Scaffold domain FR741_05525 PF02600 Disulfide bond formation protein DsbB FR741_05530 PF06450 Bacterial Na+/H+ antiporter B (NhaB) FR741_05535 PF07840 FadR C-terminal domain FR741_05535 PF00392 Bacterial regulatory proteins, gntR family FR741_05545 PF01588 Putative tRNA binding domain FR741_05545 PF09334 tRNA synthetases class I (M) FR741_05550 PF10609 NUBPL iron-transfer P-loop NTPase FR741_05555 PF00485 Phosphoribulokinase / Uridine kinase family FR741_05565 PF12557 Cob(I)alamin adenosyltransferase N terminal FR741_05565 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FR741_05570 PF01451 Low molecular weight phosphotyrosine protein phosphatase FR741_05575 PF01740 STAS domain FR741_05575 PF00916 Sulfate permease family FR741_05585 PF12111 Polyribonucleotide phosphorylase C terminal FR741_05585 PF10150 Ribonuclease E/G family FR741_05585 PF00575 S1 RNA binding domain FR741_05590 PF01479 S4 domain FR741_05590 PF00849 RNA pseudouridylate synthase FR741_05595 PF02545 Maf-like protein FR741_05600 PF02620 Large ribosomal RNA subunit accumulation protein YceD FR741_05605 PF01783 Ribosomal L32p protein family FR741_05610 PF02504 Fatty acid synthesis protein FR741_05615 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FR741_05615 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FR741_05620 PF00698 Acyl transferase domain FR741_05630 PF00550 Phosphopantetheine attachment site FR741_05635 PF00109 Beta-ketoacyl synthase, N-terminal domain FR741_05635 PF02801 Beta-ketoacyl synthase, C-terminal domain FR741_05640 PF01063 Amino-transferase class IV FR741_05645 PF02618 YceG-like family FR741_05650 PF02223 Thymidylate kinase FR741_05655 PF09115 DNA polymerase III, delta subunit, C terminal FR741_05660 PF01026 TatD related DNase FR741_05665 PF00367 phosphotransferase system, EIIB FR741_05665 PF02378 Phosphotransferase system, EIIC FR741_05680 PF00209 Sodium:neurotransmitter symporter family FR741_05695 PF01734 Patatin-like phospholipase FR741_05700 PF02887 Pyruvate kinase, alpha/beta domain FR741_05700 PF00224 Pyruvate kinase, barrel domain FR741_05705 PF00480 ROK family FR741_05710 PF01584 CheW-like domain FR741_05710 PF00072 Response regulator receiver domain FR741_05715 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FR741_05715 PF07733 Bacterial DNA polymerase III alpha NTPase domain FR741_05715 PF01336 OB-fold nucleic acid binding domain FR741_05715 PF02811 PHP domain FR741_05715 PF14579 Helix-hairpin-helix motif FR741_05730 PF00106 short chain dehydrogenase FR741_05735 PF08496 Peptidase family S49 N-terminal FR741_05735 PF01343 Peptidase family S49 FR741_05740 PF02224 Cytidylate kinase FR741_05745 PF00575 S1 RNA binding domain FR741_05750 PF00216 Bacterial DNA-binding protein FR741_05755 PF06305 Lipopolysaccharide assembly protein A domain FR741_05760 PF18073 Rubredoxin metal binding domain FR741_05765 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FR741_05770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR741_05785 PF02470 MlaD protein FR741_05790 PF04403 Paraquat-inducible protein A FR741_05795 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FR741_05800 PF00034 Cytochrome c FR741_05805 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FR741_05805 PF00384 Molybdopterin oxidoreductase FR741_05805 PF01568 Molydopterin dinucleotide binding domain FR741_05810 PF03916 Polysulphide reductase, NrfD FR741_05815 PF13247 4Fe-4S dicluster domain FR741_05820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_05820 PF00512 His Kinase A (phospho-acceptor) domain FR741_05825 PF00072 Response regulator receiver domain FR741_05825 PF00196 Bacterial regulatory proteins, luxR family FR741_05835 PF02683 Cytochrome C biogenesis protein transmembrane region FR741_05835 PF11412 Disulphide bond corrector protein DsbC FR741_05840 PF00085 Thioredoxin FR741_05855 PF01938 TRAM domain FR741_05855 PF05958 tRNA (Uracil-5-)-methyltransferase FR741_05870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR741_05880 PF12704 MacB-like periplasmic core domain FR741_05880 PF02687 FtsX-like permease family FR741_05880 PF00005 ABC transporter FR741_05885 PF00005 ABC transporter FR741_05885 PF12704 MacB-like periplasmic core domain FR741_05885 PF02687 FtsX-like permease family FR741_05890 PF02687 FtsX-like permease family FR741_05890 PF12704 MacB-like periplasmic core domain FR741_05890 PF00005 ABC transporter FR741_05910 PF08267 Cobalamin-independent synthase, N-terminal domain FR741_05910 PF01717 Cobalamin-independent synthase, Catalytic domain FR741_05920 PF00529 HlyD membrane-fusion protein of T1SS FR741_05920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR741_05925 PF03466 LysR substrate binding domain FR741_05925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_05945 PF00672 HAMP domain FR741_05945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_05945 PF00512 His Kinase A (phospho-acceptor) domain FR741_05950 PF00486 Transcriptional regulatory protein, C terminal FR741_05950 PF00072 Response regulator receiver domain FR741_05960 PF00672 HAMP domain FR741_05960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FR741_05975 PF11842 Domain of unknown function (DUF3362) FR741_05975 PF04055 Radical SAM superfamily FR741_05975 PF08497 Radical SAM N-terminal FR741_05980 PF00563 EAL domain FR741_05980 PF00990 Diguanylate cyclase, GGDEF domain FR741_05980 PF08448 PAS fold FR741_05980 PF08447 PAS fold FR741_05995 PF03466 LysR substrate binding domain FR741_05995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_06000 PF08267 Cobalamin-independent synthase, N-terminal domain FR741_06000 PF01717 Cobalamin-independent synthase, Catalytic domain FR741_06010 PF03795 YCII-related domain FR741_06015 PF03061 Thioesterase superfamily FR741_06020 PF04279 Intracellular septation protein A FR741_06030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_06030 PF00072 Response regulator receiver domain FR741_06035 PF17327 Acyl homoserine lactone synthase FR741_06040 PF00375 Sodium:dicarboxylate symporter family FR741_06050 PF13193 AMP-binding enzyme C-terminal domain FR741_06050 PF00501 AMP-binding enzyme FR741_06055 PF00027 Cyclic nucleotide-binding domain FR741_06055 PF13545 Crp-like helix-turn-helix domain FR741_06060 PF00290 Tryptophan synthase alpha chain FR741_06065 PF00291 Pyridoxal-phosphate dependent enzyme FR741_06070 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FR741_06070 PF00218 Indole-3-glycerol phosphate synthase FR741_06075 PF00591 Glycosyl transferase family, a/b domain FR741_06075 PF02885 Glycosyl transferase family, helical bundle domain FR741_06080 PF00117 Glutamine amidotransferase class-I FR741_06085 PF04715 Anthranilate synthase component I, N terminal region FR741_06085 PF00425 chorismate binding enzyme FR741_06090 PF08056 Tryptophan operon leader peptide FR741_06095 PF02811 PHP domain FR741_06100 PF01300 Telomere recombination FR741_06110 PF01479 S4 domain FR741_06110 PF00849 RNA pseudouridylate synthase FR741_06115 PF04269 Protein of unknown function, DUF440 FR741_06120 PF09285 Elongation factor P, C-terminal FR741_06120 PF08207 Elongation factor P (EF-P) KOW-like domain FR741_06120 PF01132 Elongation factor P (EF-P) OB domain FR741_06130 PF03104 DNA polymerase family B, exonuclease domain FR741_06130 PF00136 DNA polymerase family B FR741_06135 PF00072 Response regulator receiver domain FR741_06135 PF00196 Bacterial regulatory proteins, luxR family FR741_06140 PF02151 UvrB/uvrC motif FR741_06140 PF08459 UvrC Helix-hairpin-helix N-terminal FR741_06140 PF01541 GIY-YIG catalytic domain FR741_06145 PF01066 CDP-alcohol phosphatidyltransferase FR741_06170 PF00202 Aminotransferase class-III FR741_06175 PF16653 Saccharopine dehydrogenase C-terminal domain FR741_06175 PF03435 Saccharopine dehydrogenase NADP binding domain FR741_06180 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FR741_06195 PF00994 Probable molybdopterin binding domain FR741_06205 PF00268 Ribonucleotide reductase, small chain FR741_06210 PF00317 Ribonucleotide reductase, all-alpha domain FR741_06210 PF02867 Ribonucleotide reductase, barrel domain FR741_06210 PF03477 ATP cone domain FR741_06220 PF00521 DNA gyrase/topoisomerase IV, subunit A FR741_06220 PF03989 DNA gyrase C-terminal domain, beta-propeller FR741_06235 PF02335 Cytochrome c552 FR741_06245 PF13247 4Fe-4S dicluster domain FR741_06250 PF03916 Polysulphide reductase, NrfD FR741_06255 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FR741_06255 PF01578 Cytochrome C assembly protein FR741_06260 PF08534 Redoxin FR741_06265 PF03918 Cytochrome C biogenesis protein FR741_06275 PF00925 GTP cyclohydrolase II FR741_06300 PF01471 Putative peptidoglycan binding domain FR741_06300 PF03734 L,D-transpeptidase catalytic domain FR741_06305 PF05951 Bacterial protein of unknown function (DUF882) FR741_06310 PF00753 Metallo-beta-lactamase superfamily FR741_06325 PF03480 Bacterial extracellular solute-binding protein, family 7 FR741_06335 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FR741_06340 PF07730 Histidine kinase FR741_06340 PF17200 Single Cache domain 2 FR741_06345 PF00072 Response regulator receiver domain FR741_06345 PF00196 Bacterial regulatory proteins, luxR family FR741_06355 PF02028 BCCT, betaine/carnitine/choline family transporter FR741_06360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FR741_06360 PF00672 HAMP domain FR741_06380 PF00155 Aminotransferase class I and II FR741_06395 PF00392 Bacterial regulatory proteins, gntR family FR741_06395 PF00155 Aminotransferase class I and II FR741_06405 PF01336 OB-fold nucleic acid binding domain FR741_06405 PF00152 tRNA synthetases class II (D, K and N) FR741_06410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FR741_06410 PF17200 Single Cache domain 2 FR741_06410 PF00672 HAMP domain FR741_06415 PF01242 6-pyruvoyl tetrahydropterin synthase FR741_06425 PF00563 EAL domain FR741_06425 PF04940 Sensors of blue-light using FAD FR741_06430 PF03313 Serine dehydratase alpha chain FR741_06430 PF03315 Serine dehydratase beta chain FR741_06435 PF03222 Tryptophan/tyrosine permease family FR741_06440 PF00293 NUDIX domain FR741_06450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_06450 PF00512 His Kinase A (phospho-acceptor) domain FR741_06450 PF00072 Response regulator receiver domain FR741_06450 PF09308 LuxQ, periplasmic FR741_06455 PF00425 chorismate binding enzyme FR741_06455 PF04715 Anthranilate synthase component I, N terminal region FR741_06475 PF04317 YcjX-like family, DUF463 FR741_06480 PF05128 Domain of unknown function (DUF697) FR741_06485 PF18024 Helix-turn-helix domain FR741_06485 PF00158 Sigma-54 interaction domain FR741_06490 PF13302 Acetyltransferase (GNAT) domain FR741_06505 PF13495 Phage integrase, N-terminal SAM-like domain FR741_06505 PF00589 Phage integrase family FR741_06550 PF01810 LysE type translocator FR741_06560 PF02224 Cytidylate kinase FR741_06560 PF02569 Pantoate-beta-alanine ligase FR741_06640 PF00589 Phage integrase family FR741_07015 PF00677 Lumazine binding domain FR741_07055 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FR741_07070 PF04463 Protein of unknown function (DUF523) FR741_07290 PF17676 LD-carboxypeptidase C-terminal domain FR741_07290 PF02016 LD-carboxypeptidase N-terminal domain FR741_07330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FR741_07385 PF00583 Acetyltransferase (GNAT) family FR741_07410 PF00583 Acetyltransferase (GNAT) family FR741_07460 PF13302 Acetyltransferase (GNAT) domain FR741_07465 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FR741_07465 PF01411 tRNA synthetases class II (A) FR741_07485 PF07237 Protein of unknown function (DUF1428) FR741_07495 PF01810 LysE type translocator FR741_07500 PF11008 Protein of unknown function (DUF2846) FR741_07515 PF13533 Biotin-lipoyl like FR741_07525 PF03466 LysR substrate binding domain FR741_07525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_07535 PF13533 Biotin-lipoyl like FR741_07550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR741_07565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_07565 PF17203 Single cache domain 3 FR741_07565 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FR741_07565 PF00989 PAS fold FR741_07570 PF00072 Response regulator receiver domain FR741_07570 PF12431 Transcriptional regulator FR741_07575 PF07715 TonB-dependent Receptor Plug Domain FR741_07575 PF00593 TonB dependent receptor FR741_07580 PF12833 Helix-turn-helix domain FR741_07585 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FR741_07585 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FR741_07590 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FR741_07595 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FR741_07595 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FR741_07610 PF01590 GAF domain FR741_07610 PF02954 Bacterial regulatory protein, Fis family FR741_07610 PF00158 Sigma-54 interaction domain FR741_07615 PF00171 Aldehyde dehydrogenase family FR741_07635 PF12833 Helix-turn-helix domain FR741_07650 PF03958 Bacterial type II/III secretion system short domain FR741_07650 PF00263 Bacterial type II and III secretion system protein FR741_07655 PF16693 Inner membrane component of T3SS, periplasmic domain FR741_07655 PF16697 Inner membrane component of T3SS, cytoplasmic domain FR741_07665 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF FR741_07670 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) FR741_07680 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI FR741_07685 PF01514 Secretory protein of YscJ/FliF family FR741_07695 PF02108 Flagellar assembly protein FliH FR741_07705 PF02661 Fic/DOC family FR741_07745 PF13533 Biotin-lipoyl like FR741_07755 PF00440 Bacterial regulatory proteins, tetR family FR741_07755 PF08360 QacR-like protein, C-terminal region FR741_07760 PF01312 FlhB HrpN YscU SpaS Family FR741_07765 PF01311 Bacterial export proteins, family 1 FR741_07770 PF01313 Bacterial export proteins, family 3 FR741_07775 PF00813 FliP family FR741_07780 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FR741_07795 PF18269 T3SS EscN ATPase C-terminal domain FR741_07795 PF02874 ATP synthase alpha/beta family, beta-barrel domain FR741_07795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FR741_07805 PF09059 TyeA FR741_07825 PF00771 FHIPEP family FR741_07830 PF09621 Type III secretion system regulator (LcrR) FR741_07840 PF04792 V antigen (LcrV) protein FR741_07845 PF07720 Tetratricopeptide repeat FR741_07855 PF05844 YopD protein FR741_07860 PF16868 NMT1-like family FR741_07865 PF01925 Sulfite exporter TauE/SafE FR741_07875 PF01970 Tripartite tricarboxylate transporter TctA family FR741_07905 PF00285 Citrate synthase, C-terminal domain FR741_07910 PF00330 Aconitase family (aconitate hydratase) FR741_07910 PF00694 Aconitase C-terminal domain FR741_07915 PF04303 PrpF protein FR741_07920 PF00501 AMP-binding enzyme FR741_07920 PF16177 Acetyl-coenzyme A synthetase N-terminus FR741_07920 PF13193 AMP-binding enzyme C-terminal domain FR741_07930 PF00089 Trypsin FR741_07945 PF04055 Radical SAM superfamily FR741_07950 PF06508 Queuosine biosynthesis protein QueC FR741_07955 PF07694 5TMR of 5TMR-LYT FR741_07955 PF00990 Diguanylate cyclase, GGDEF domain FR741_07965 PF00691 OmpA family FR741_07965 PF05736 OprF membrane domain FR741_07980 PF05736 OprF membrane domain FR741_07980 PF00691 OmpA family FR741_07995 PF10672 S-adenosylmethionine-dependent methyltransferase FR741_07995 PF17785 PUA-like domain FR741_08000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FR741_08000 PF02743 Cache domain FR741_08000 PF00672 HAMP domain FR741_08005 PF00708 Acylphosphatase FR741_08010 PF04358 DsrC like protein FR741_08020 PF01027 Inhibitor of apoptosis-promoting Bax1 FR741_08025 PF00005 ABC transporter FR741_08030 PF00528 Binding-protein-dependent transport system inner membrane component FR741_08035 PF00528 Binding-protein-dependent transport system inner membrane component FR741_08040 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR741_08050 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FR741_08050 PF14824 Sirohaem biosynthesis protein central FR741_08050 PF10414 Sirohaem synthase dimerisation region FR741_08055 PF04461 Protein of unknown function (DUF520) FR741_08060 PF00793 DAHP synthetase I family FR741_08080 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF FR741_08080 PF01189 16S rRNA methyltransferase RsmB/F FR741_08080 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF FR741_08085 PF02470 MlaD protein FR741_08090 PF04403 Paraquat-inducible protein A FR741_08095 PF00664 ABC transporter transmembrane region FR741_08095 PF00005 ABC transporter FR741_08100 PF13185 GAF domain FR741_08105 PF17516 ProQ C-terminal domain FR741_08105 PF04352 ProQ/FINO family FR741_08110 PF17804 Tail specific protease N-terminal domain FR741_08110 PF11818 C-terminal domain of tail specific protease (DUF3340) FR741_08110 PF00595 PDZ domain FR741_08110 PF03572 Peptidase family S41 FR741_08120 PF11940 Domain of unknown function (DUF3458) Ig-like fold FR741_08120 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FR741_08120 PF01433 Peptidase family M1 domain FR741_08130 PF05088 Bacterial NAD-glutamate dehydrogenase FR741_08135 PF01180 Dihydroorotate dehydrogenase FR741_08140 PF07126 Cell-division protein ZapC FR741_08145 PF10672 S-adenosylmethionine-dependent methyltransferase FR741_08145 PF01170 Putative RNA methylase family UPF0020 FR741_08145 PF02926 THUMP domain FR741_08165 PF04957 Ribosome modulation factor FR741_08170 PF07977 FabA-like domain FR741_08175 PF13654 AAA domain FR741_08175 PF05362 Lon protease (S16) C-terminal proteolytic domain FR741_08180 PF17414 MatP C-terminal ribbon-helix-helix domain FR741_08180 PF06303 MatP N-terminal domain FR741_08200 PF00072 Response regulator receiver domain FR741_08200 PF09308 LuxQ, periplasmic FR741_08200 PF00512 His Kinase A (phospho-acceptor) domain FR741_08200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_08215 PF00115 Cytochrome C and Quinol oxidase polypeptide I FR741_08230 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FR741_08230 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FR741_08240 PF00403 Heavy-metal-associated domain FR741_08255 PF13545 Crp-like helix-turn-helix domain FR741_08255 PF00027 Cyclic nucleotide-binding domain FR741_08260 PF00582 Universal stress protein family FR741_08265 PF01171 PP-loop family FR741_08285 PF00005 ABC transporter FR741_08285 PF08402 TOBE domain FR741_08290 PF00528 Binding-protein-dependent transport system inner membrane component FR741_08295 PF00528 Binding-protein-dependent transport system inner membrane component FR741_08300 PF13416 Bacterial extracellular solute-binding protein FR741_08305 PF13416 Bacterial extracellular solute-binding protein FR741_08310 PF02146 Sir2 family FR741_08315 PF00909 Ammonium Transporter Family FR741_08340 PF13247 4Fe-4S dicluster domain FR741_08345 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FR741_08345 PF00384 Molybdopterin oxidoreductase FR741_08345 PF01568 Molydopterin dinucleotide binding domain FR741_08355 PF02613 Nitrate reductase delta subunit FR741_08375 PF02634 FdhD/NarQ family FR741_08380 PF12848 ABC transporter FR741_08380 PF00005 ABC transporter FR741_08390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_08390 PF00512 His Kinase A (phospho-acceptor) domain FR741_08395 PF00072 Response regulator receiver domain FR741_08395 PF00158 Sigma-54 interaction domain FR741_08395 PF02954 Bacterial regulatory protein, Fis family FR741_08400 PF12849 PBP superfamily domain FR741_08405 PF00528 Binding-protein-dependent transport system inner membrane component FR741_08410 PF00005 ABC transporter FR741_08410 PF08402 TOBE domain FR741_08415 PF12804 MobA-like NTP transferase domain FR741_08420 PF03454 MoeA C-terminal region (domain IV) FR741_08420 PF03453 MoeA N-terminal region (domain I and II) FR741_08420 PF00994 Probable molybdopterin binding domain FR741_08430 PF00480 ROK family FR741_08465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FR741_08465 PF02743 Cache domain FR741_08465 PF00672 HAMP domain FR741_08470 PF00877 NlpC/P60 family FR741_08480 PF00990 Diguanylate cyclase, GGDEF domain FR741_08480 PF05230 MASE2 domain FR741_08485 PF01339 CheB methylesterase FR741_08485 PF00072 Response regulator receiver domain FR741_08490 PF03881 Fructosamine kinase FR741_08500 PF00677 Lumazine binding domain FR741_08505 PF01554 MatE FR741_08515 PF14743 DNA ligase OB-like domain FR741_08515 PF01068 ATP dependent DNA ligase domain FR741_08520 PF01740 STAS domain FR741_08530 PF02563 Polysaccharide biosynthesis/export protein FR741_08530 PF10531 SLBB domain FR741_08545 PF02954 Bacterial regulatory protein, Fis family FR741_08545 PF00158 Sigma-54 interaction domain FR741_08545 PF00072 Response regulator receiver domain FR741_08550 PF00534 Glycosyl transferases group 1 FR741_08550 PF13439 Glycosyltransferase Family 4 FR741_08555 PF00534 Glycosyl transferases group 1 FR741_08555 PF13439 Glycosyltransferase Family 4 FR741_08585 PF13439 Glycosyltransferase Family 4 FR741_08585 PF00534 Glycosyl transferases group 1 FR741_08595 PF02397 Bacterial sugar transferase FR741_08605 PF02028 BCCT, betaine/carnitine/choline family transporter FR741_08620 PF11898 Domain of unknown function (DUF3418) FR741_08620 PF04408 Helicase associated domain (HA2) FR741_08620 PF00271 Helicase conserved C-terminal domain FR741_08620 PF00270 DEAD/DEAH box helicase FR741_08620 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FR741_08625 PF02525 Flavodoxin-like fold FR741_08660 PF00990 Diguanylate cyclase, GGDEF domain FR741_08670 PF00012 Hsp70 protein FR741_08675 PF00012 Hsp70 protein FR741_08695 PF07963 Prokaryotic N-terminal methylation motif FR741_08695 PF14245 Type IV pilin PilA FR741_08700 PF00005 ABC transporter FR741_08700 PF00664 ABC transporter transmembrane region FR741_08705 PF00005 ABC transporter FR741_08705 PF00664 ABC transporter transmembrane region FR741_08715 PF07715 TonB-dependent Receptor Plug Domain FR741_08715 PF00593 TonB dependent receptor FR741_08720 PF01032 FecCD transport family FR741_08725 PF01497 Periplasmic binding protein FR741_08730 PF00005 ABC transporter FR741_08745 PF03222 Tryptophan/tyrosine permease family FR741_08750 PF00465 Iron-containing alcohol dehydrogenase FR741_08755 PF01966 HD domain FR741_08765 PF03741 Integral membrane protein TerC family FR741_08775 PF04055 Radical SAM superfamily FR741_08780 PF11230 Protein of unknown function (DUF3029) FR741_08785 PF01810 LysE type translocator FR741_08790 PF01966 HD domain FR741_08790 PF11871 Domain of unknown function (DUF3391) FR741_08795 PF00990 Diguanylate cyclase, GGDEF domain FR741_08795 PF00563 EAL domain FR741_08795 PF03707 Bacterial signalling protein N terminal repeat FR741_08800 PF00072 Response regulator receiver domain FR741_08800 PF00158 Sigma-54 interaction domain FR741_08800 PF02954 Bacterial regulatory protein, Fis family FR741_08805 PF00512 His Kinase A (phospho-acceptor) domain FR741_08805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_08810 PF00939 Sodium:sulfate symporter transmembrane region FR741_08830 PF00072 Response regulator receiver domain FR741_08830 PF00990 Diguanylate cyclase, GGDEF domain FR741_08835 PF03928 Haem-degrading FR741_08840 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FR741_08840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FR741_08845 PF00455 DeoR C terminal sensor domain FR741_08845 PF08220 DeoR-like helix-turn-helix domain FR741_08860 PF13186 Iron-sulfur cluster-binding domain FR741_08860 PF04055 Radical SAM superfamily FR741_08865 PF03781 Sulfatase-modifying factor enzyme 1 FR741_08875 PF00884 Sulfatase FR741_08880 PF13840 ACT domain FR741_08880 PF00696 Amino acid kinase family FR741_08885 PF06339 Ectoine synthase FR741_08890 PF00202 Aminotransferase class-III FR741_08895 PF00583 Acetyltransferase (GNAT) family FR741_08900 PF02028 BCCT, betaine/carnitine/choline family transporter FR741_08915 PF00005 ABC transporter FR741_08915 PF00571 CBS domain FR741_08920 PF00528 Binding-protein-dependent transport system inner membrane component FR741_08925 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FR741_08935 PF00501 AMP-binding enzyme FR741_08955 PF00486 Transcriptional regulatory protein, C terminal FR741_08955 PF00072 Response regulator receiver domain FR741_08960 PF08521 Two-component sensor kinase N-terminal FR741_08960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_08960 PF00512 His Kinase A (phospho-acceptor) domain FR741_08965 PF00884 Sulfatase FR741_08995 PF01235 Sodium:alanine symporter family FR741_09005 PF01810 LysE type translocator FR741_09010 PF02074 Carboxypeptidase Taq (M32) metallopeptidase FR741_09015 PF03279 Bacterial lipid A biosynthesis acyltransferase FR741_09020 PF13520 Amino acid permease FR741_09025 PF00893 Small Multidrug Resistance protein FR741_09035 PF04204 Homoserine O-succinyltransferase FR741_09050 PF03707 Bacterial signalling protein N terminal repeat FR741_09050 PF00990 Diguanylate cyclase, GGDEF domain FR741_09050 PF00563 EAL domain FR741_09055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_09055 PF00672 HAMP domain FR741_09055 PF01627 Hpt domain FR741_09055 PF00072 Response regulator receiver domain FR741_09055 PF00512 His Kinase A (phospho-acceptor) domain FR741_09055 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FR741_09070 PF00132 Bacterial transferase hexapeptide (six repeats) FR741_09070 PF12464 Maltose acetyltransferase FR741_09085 PF04237 YjbR FR741_09090 PF01047 MarR family FR741_09100 PF12792 CSS motif domain associated with EAL FR741_09100 PF00563 EAL domain FR741_09135 PF02798 Glutathione S-transferase, N-terminal domain FR741_09135 PF14497 Glutathione S-transferase, C-terminal domain FR741_09145 PF04209 homogentisate 1,2-dioxygenase FR741_09150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FR741_09155 PF01546 Peptidase family M20/M25/M40 FR741_09155 PF07687 Peptidase dimerisation domain FR741_09160 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR741_09165 PF00528 Binding-protein-dependent transport system inner membrane component FR741_09170 PF00528 Binding-protein-dependent transport system inner membrane component FR741_09170 PF12911 N-terminal TM domain of oligopeptide transport permease C FR741_09175 PF00005 ABC transporter FR741_09175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR741_09180 PF00005 ABC transporter FR741_09180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR741_09190 PF08453 Peptidase family M9 N-terminal FR741_09190 PF01752 Collagenase FR741_09205 PF00528 Binding-protein-dependent transport system inner membrane component FR741_09210 PF00528 Binding-protein-dependent transport system inner membrane component FR741_09215 PF08402 TOBE domain FR741_09215 PF00005 ABC transporter FR741_09220 PF00701 Dihydrodipicolinate synthetase family FR741_09225 PF02423 Ornithine cyclodeaminase/mu-crystallin family FR741_09235 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FR741_09235 PF01266 FAD dependent oxidoreductase FR741_09240 PF05544 Proline racemase FR741_09245 PF00171 Aldehyde dehydrogenase family FR741_09250 PF00392 Bacterial regulatory proteins, gntR family FR741_09270 PF05971 RNA methyltransferase FR741_09275 PF01863 Protein of unknown function DUF45 FR741_09285 PF03466 LysR substrate binding domain FR741_09285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_09305 PF00005 ABC transporter FR741_09310 PF01032 FecCD transport family FR741_09315 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FR741_09330 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FR741_09335 PF02654 Cobalamin-5-phosphate synthase FR741_09340 PF02277 Phosphoribosyltransferase FR741_09345 PF13460 NAD(P)H-binding FR741_09355 PF08411 Exonuclease C-terminal FR741_09355 PF00929 Exonuclease FR741_09360 PF03788 LrgA family FR741_09365 PF04172 LrgB-like family FR741_09370 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region FR741_09370 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FR741_09375 PF02222 ATP-grasp domain FR741_09380 PF05724 Thiopurine S-methyltransferase (TPMT) FR741_09390 PF00216 Bacterial DNA-binding protein FR741_09400 PF03484 tRNA synthetase B5 domain FR741_09400 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FR741_09400 PF01588 Putative tRNA binding domain FR741_09400 PF03147 Ferredoxin-fold anticodon binding domain FR741_09400 PF03483 B3/4 domain FR741_09405 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FR741_09405 PF01409 tRNA synthetases class II core domain (F) FR741_09435 PF01906 Putative heavy-metal-binding FR741_09440 PF00453 Ribosomal protein L20 FR741_09445 PF01632 Ribosomal protein L35 FR741_09450 PF05198 Translation initiation factor IF-3, N-terminal domain FR741_09450 PF00707 Translation initiation factor IF-3, C-terminal domain FR741_09455 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FR741_09455 PF03129 Anticodon binding domain FR741_09455 PF02824 TGS domain FR741_09455 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FR741_09470 PF07702 UTRA domain FR741_09470 PF00392 Bacterial regulatory proteins, gntR family FR741_09475 PF01979 Amidohydrolase family FR741_09480 PF00491 Arginase family FR741_09485 PF17391 Urocanase N-terminal domain FR741_09485 PF17392 Urocanase C-terminal domain FR741_09485 PF01175 Urocanase Rossmann-like domain FR741_09490 PF00221 Aromatic amino acid lyase FR741_09500 PF04191 Phospholipid methyltransferase FR741_09505 PF02913 FAD linked oxidases, C-terminal domain FR741_09505 PF13183 4Fe-4S dicluster domain FR741_09505 PF01565 FAD binding domain FR741_09520 PF05736 OprF membrane domain FR741_09520 PF00691 OmpA family FR741_09540 PF01259 SAICAR synthetase FR741_09545 PF16655 PhoD-like phosphatase, N-terminal domain FR741_09545 PF09423 PhoD-like phosphatase FR741_09555 PF00270 DEAD/DEAH box helicase FR741_09555 PF04408 Helicase associated domain (HA2) FR741_09555 PF08482 ATP-dependent helicase C-terminal FR741_09555 PF00271 Helicase conserved C-terminal domain FR741_09560 PF00390 Malic enzyme, N-terminal domain FR741_09560 PF03949 Malic enzyme, NAD binding domain FR741_09565 PF02698 DUF218 domain FR741_09570 PF00939 Sodium:sulfate symporter transmembrane region FR741_09575 PF00990 Diguanylate cyclase, GGDEF domain FR741_09575 PF00072 Response regulator receiver domain FR741_09585 PF00266 Aminotransferase class-V FR741_09595 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR741_09600 PF00664 ABC transporter transmembrane region FR741_09600 PF00005 ABC transporter FR741_09605 PF00664 ABC transporter transmembrane region FR741_09605 PF00005 ABC transporter FR741_09610 PF00291 Pyridoxal-phosphate dependent enzyme FR741_09615 PF00266 Aminotransferase class-V FR741_09625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_09625 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR741_09625 PF00512 His Kinase A (phospho-acceptor) domain FR741_09640 PF04994 TfoX C-terminal domain FR741_09640 PF04993 TfoX N-terminal domain FR741_09655 PF03956 Lysine exporter LysO FR741_09665 PF00282 Pyridoxal-dependent decarboxylase conserved domain FR741_09670 PF01380 SIS domain FR741_09670 PF01418 Helix-turn-helix domain, rpiR family FR741_09675 PF00465 Iron-containing alcohol dehydrogenase FR741_09685 PF00462 Glutaredoxin FR741_09690 PF02080 TrkA-C domain FR741_09690 PF06826 Predicted Permease Membrane Region FR741_09695 PF07055 Enoyl reductase FAD binding domain FR741_09695 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FR741_09695 PF12241 Trans-2-enoyl-CoA reductase catalytic region FR741_09700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FR741_09700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FR741_09700 PF09317 Domain of unknown function (DUF1974) FR741_09700 PF02770 Acyl-CoA dehydrogenase, middle domain FR741_09705 PF00440 Bacterial regulatory proteins, tetR family FR741_09705 PF16295 Tetracyclin repressor-like, C-terminal domain FR741_09710 PF06965 Na+/H+ antiporter 1 FR741_09725 PF00005 ABC transporter FR741_09730 PF01554 MatE FR741_09735 PF13460 NAD(P)H-binding FR741_09735 PF11066 Protein of unknown function (DUF2867) FR741_09740 PF03264 NapC/NirT cytochrome c family, N-terminal region FR741_09755 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) FR741_09770 PF07690 Major Facilitator Superfamily FR741_09780 PF01479 S4 domain FR741_09780 PF00849 RNA pseudouridylate synthase FR741_09785 PF00271 Helicase conserved C-terminal domain FR741_09785 PF04851 Type III restriction enzyme, res subunit FR741_09795 PF00072 Response regulator receiver domain FR741_09795 PF00486 Transcriptional regulatory protein, C terminal FR741_09800 PF00512 His Kinase A (phospho-acceptor) domain FR741_09800 PF00672 HAMP domain FR741_09800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_09810 PF01386 Ribosomal L25p family FR741_09815 PF00583 Acetyltransferase (GNAT) family FR741_09820 PF02872 5'-nucleotidase, C-terminal domain FR741_09820 PF00149 Calcineurin-like phosphoesterase FR741_09830 PF06945 Protein of unknown function (DUF1289) FR741_09840 PF13416 Bacterial extracellular solute-binding protein FR741_09845 PF00528 Binding-protein-dependent transport system inner membrane component FR741_09850 PF00005 ABC transporter FR741_09855 PF01066 CDP-alcohol phosphatidyltransferase FR741_09870 PF01590 GAF domain FR741_09870 PF00158 Sigma-54 interaction domain FR741_09875 PF03063 Prismane/CO dehydrogenase family FR741_09880 PF00175 Oxidoreductase NAD-binding domain FR741_09880 PF00970 Oxidoreductase FAD-binding domain FR741_09880 PF00111 2Fe-2S iron-sulfur cluster binding domain FR741_09890 PF00849 RNA pseudouridylate synthase FR741_09895 PF00209 Sodium:neurotransmitter symporter family FR741_09900 PF13091 PLD-like domain FR741_09900 PF13396 Phospholipase_D-nuclease N-terminal FR741_09905 PF01053 Cys/Met metabolism PLP-dependent enzyme FR741_09910 PF00561 alpha/beta hydrolase fold FR741_09915 PF03280 Proteobacterial lipase chaperone protein FR741_09920 PF03352 Methyladenine glycosylase FR741_09925 PF00873 AcrB/AcrD/AcrF family FR741_09930 PF13533 Biotin-lipoyl like FR741_09940 PF04024 PspC domain FR741_09945 PF06667 Phage shock protein B FR741_09950 PF04012 PspA/IM30 family FR741_09955 PF02954 Bacterial regulatory protein, Fis family FR741_09955 PF00158 Sigma-54 interaction domain FR741_09960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR741_09965 PF00528 Binding-protein-dependent transport system inner membrane component FR741_09970 PF12911 N-terminal TM domain of oligopeptide transport permease C FR741_09970 PF00528 Binding-protein-dependent transport system inner membrane component FR741_09975 PF00005 ABC transporter FR741_09975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR741_09980 PF00005 ABC transporter FR741_09990 PF01368 DHH family FR741_09990 PF02833 DHHA2 domain FR741_10000 PF16875 Glycosyl hydrolase family 36 N-terminal domain FR741_10000 PF16874 Glycosyl hydrolase family 36 C-terminal domain FR741_10005 PF01568 Molydopterin dinucleotide binding domain FR741_10005 PF00384 Molybdopterin oxidoreductase FR741_10005 PF18364 Molybdopterin oxidoreductase N-terminal domain FR741_10010 PF03264 NapC/NirT cytochrome c family, N-terminal region FR741_10015 PF06796 Periplasmic nitrate reductase protein NapE FR741_10020 PF03649 Uncharacterised protein family (UPF0014) FR741_10030 PF01226 Formate/nitrite transporter FR741_10055 PF02698 DUF218 domain FR741_10060 PF00265 Thymidine kinase FR741_10065 PF09190 DALR domain FR741_10065 PF01406 tRNA synthetases class I (C) catalytic domain FR741_10070 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FR741_10075 PF00149 Calcineurin-like phosphoesterase FR741_10080 PF08668 HDOD domain FR741_10080 PF00563 EAL domain FR741_10085 PF02810 SEC-C motif FR741_10090 PF01502 Phosphoribosyl-AMP cyclohydrolase FR741_10090 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FR741_10095 PF00977 Histidine biosynthesis protein FR741_10100 PF00977 Histidine biosynthesis protein FR741_10105 PF00117 Glutamine amidotransferase class-I FR741_10110 PF00475 Imidazoleglycerol-phosphate dehydratase FR741_10110 PF08645 Polynucleotide kinase 3 phosphatase FR741_10115 PF00155 Aminotransferase class I and II FR741_10120 PF00815 Histidinol dehydrogenase FR741_10125 PF01634 ATP phosphoribosyltransferase FR741_10125 PF08029 HisG, C-terminal domain FR741_10130 PF00072 Response regulator receiver domain FR741_10130 PF02954 Bacterial regulatory protein, Fis family FR741_10130 PF00158 Sigma-54 interaction domain FR741_10135 PF03553 Na+/H+ antiporter family FR741_10140 PF00816 H-NS histone family FR741_10145 PF00294 pfkB family carbohydrate kinase FR741_10160 PF04356 Protein of unknown function (DUF489) FR741_10165 PF00206 Lyase FR741_10165 PF08328 Adenylosuccinate lyase C-terminal FR741_10175 PF16036 Chalcone isomerase-like FR741_10200 PF00106 short chain dehydrogenase FR741_10210 PF01435 Peptidase family M48 FR741_10225 PF12697 Alpha/beta hydrolase family FR741_10225 PF08241 Methyltransferase domain FR741_10230 PF00155 Aminotransferase class I and II FR741_10235 PF06968 Biotin and Thiamin Synthesis associated domain FR741_10235 PF04055 Radical SAM superfamily FR741_10240 PF00202 Aminotransferase class-III FR741_10245 PF01258 Prokaryotic dksA/traR C4-type zinc finger FR741_10260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FR741_10260 PF02403 Seryl-tRNA synthetase N-terminal domain FR741_10265 PF16193 AAA C-terminal domain FR741_10265 PF00004 ATPase family associated with various cellular activities (AAA) FR741_10265 PF12002 MgsA AAA+ ATPase C terminal FR741_10270 PF03548 Outer membrane lipoprotein carrier protein LolA FR741_10275 PF17854 FtsK alpha domain FR741_10275 PF09397 Ftsk gamma domain FR741_10275 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FR741_10275 PF01580 FtsK/SpoIIIE family FR741_10280 PF01037 Lrp/AsnC ligand binding domain FR741_10285 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FR741_10285 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FR741_10295 PF03466 LysR substrate binding domain FR741_10295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_10305 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) FR741_10310 PF12729 Four helix bundle sensory module for signal transduction FR741_10310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FR741_10310 PF00672 HAMP domain FR741_10320 PF03372 Endonuclease/Exonuclease/phosphatase family FR741_10330 PF00579 tRNA synthetases class I (W and Y) FR741_10345 PF00873 AcrB/AcrD/AcrF family FR741_10350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR741_10350 PF00529 HlyD membrane-fusion protein of T1SS FR741_10355 PF00672 HAMP domain FR741_10355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FR741_10365 PF06610 L-alanine exporter FR741_10370 PF00072 Response regulator receiver domain FR741_10370 PF00512 His Kinase A (phospho-acceptor) domain FR741_10370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_10370 PF09308 LuxQ, periplasmic FR741_10380 PF03738 Glutathionylspermidine synthase preATP-grasp FR741_10390 PF03994 Domain of Unknown Function (DUF350) FR741_10400 PF02445 Quinolinate synthetase A protein FR741_10405 PF16331 TolA binding protein trimerisation FR741_10405 PF13174 Tetratricopeptide repeat FR741_10410 PF00691 OmpA family FR741_10415 PF04052 TolB amino-terminal domain FR741_10415 PF07676 WD40-like Beta Propeller Repeat FR741_10425 PF02472 Biopolymer transport protein ExbD/TolR FR741_10430 PF01618 MotA/TolQ/ExbB proton channel family FR741_10435 PF03061 Thioesterase superfamily FR741_10445 PF08173 Membrane bound YbgT-like protein FR741_10450 PF02322 Cytochrome bd terminal oxidase subunit II FR741_10455 PF01654 Cytochrome bd terminal oxidase subunit I FR741_10460 PF17864 RuvB AAA lid domain FR741_10460 PF05496 Holliday junction DNA helicase RuvB P-loop domain FR741_10460 PF05491 RuvB C-terminal winged helix domain FR741_10465 PF07499 RuvA, C-terminal domain FR741_10465 PF01330 RuvA N terminal domain FR741_10470 PF02075 Crossover junction endodeoxyribonuclease RuvC FR741_10475 PF01709 Transcriptional regulator FR741_10480 PF00152 tRNA synthetases class II (D, K and N) FR741_10480 PF02938 GAD domain FR741_10480 PF01336 OB-fold nucleic acid binding domain FR741_10485 PF01904 Protein of unknown function DUF72 FR741_10490 PF13649 Methyltransferase domain FR741_10495 PF08003 Protein of unknown function (DUF1698) FR741_10505 PF08443 RimK-like ATP-grasp domain FR741_10505 PF18030 RimK PreATP-grasp domain FR741_10525 PF16330 MukB hinge domain FR741_10525 PF04310 MukB N-terminal FR741_10530 PF04288 MukE-like family FR741_10535 PF03882 MukF winged-helix domain FR741_10535 PF17193 MukF C-terminal domain FR741_10535 PF17192 MukF middle domain FR741_10540 PF13847 Methyltransferase domain FR741_10545 PF02698 DUF218 domain FR741_10550 PF00486 Transcriptional regulatory protein, C terminal FR741_10550 PF00072 Response regulator receiver domain FR741_10555 PF02613 Nitrate reductase delta subunit FR741_10560 PF00356 Bacterial regulatory proteins, lacI family FR741_10565 PF04993 TfoX N-terminal domain FR741_10565 PF04994 TfoX C-terminal domain FR741_10585 PF00534 Glycosyl transferases group 1 FR741_10585 PF08323 Starch synthase catalytic domain FR741_10590 PF00483 Nucleotidyl transferase FR741_10595 PF08272 Topoisomerase I zinc-ribbon-like FR741_10595 PF01131 DNA topoisomerase FR741_10595 PF01751 Toprim domain FR741_10595 PF01396 Topoisomerase DNA binding C4 zinc finger FR741_10600 PF10692 Protein of unknown function (DUF2498) FR741_10605 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FR741_10615 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FR741_10620 PF04376 Arginine-tRNA-protein transferase, N terminus FR741_10620 PF04377 Arginine-tRNA-protein transferase, C terminus FR741_10625 PF01176 Translation initiation factor 1A / IF-1 FR741_10630 PF17871 AAA lid domain FR741_10630 PF10431 C-terminal, D2-small domain, of ClpB protein FR741_10630 PF07724 AAA domain (Cdc48 subfamily) FR741_10630 PF02861 Clp amino terminal domain, pathogenicity island component FR741_10630 PF00004 ATPase family associated with various cellular activities (AAA) FR741_10635 PF02617 ATP-dependent Clp protease adaptor protein ClpS FR741_10640 PF00313 'Cold-shock' DNA-binding domain FR741_10645 PF03971 Monomeric isocitrate dehydrogenase FR741_10650 PF00849 RNA pseudouridylate synthase FR741_10655 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FR741_10665 PF13307 Helicase C-terminal domain FR741_10665 PF06733 DEAD_2 FR741_10670 PF01925 Sulfite exporter TauE/SafE FR741_10675 PF07445 Primosomal replication protein priC FR741_10680 PF10689 Protein of unknown function (DUF2496) FR741_10685 PF03372 Endonuclease/Exonuclease/phosphatase family FR741_10695 PF00528 Binding-protein-dependent transport system inner membrane component FR741_10700 PF00528 Binding-protein-dependent transport system inner membrane component FR741_10705 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR741_10710 PF00005 ABC transporter FR741_10730 PF01228 Glycine radical FR741_10730 PF02901 Pyruvate formate lyase-like FR741_10740 PF04055 Radical SAM superfamily FR741_10750 PF03887 YfbU domain FR741_10760 PF06798 PrkA serine protein kinase C-terminal domain FR741_10760 PF08298 PrkA AAA domain FR741_10765 PF04285 Protein of unknown function (DUF444) FR741_10770 PF04293 SpoVR like protein FR741_10775 PF02348 Cytidylyltransferase FR741_10780 PF03966 Trm112p-like protein FR741_10785 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FR741_10790 PF00664 ABC transporter transmembrane region FR741_10790 PF00005 ABC transporter FR741_10795 PF00753 Metallo-beta-lactamase superfamily FR741_10795 PF03772 Competence protein FR741_10795 PF13567 Domain of unknown function (DUF4131) FR741_10805 PF12704 MacB-like periplasmic core domain FR741_10805 PF02687 FtsX-like permease family FR741_10810 PF00005 ABC transporter FR741_10815 PF12704 MacB-like periplasmic core domain FR741_10815 PF02687 FtsX-like permease family FR741_10825 PF00271 Helicase conserved C-terminal domain FR741_10825 PF17757 UvrB interaction domain FR741_10825 PF02559 CarD-like/TRCF domain FR741_10825 PF03461 TRCF domain FR741_10825 PF00270 DEAD/DEAH box helicase FR741_10840 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR741_10845 PF05728 Uncharacterised protein family (UPF0227) FR741_10850 PF01636 Phosphotransferase enzyme family FR741_10855 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FR741_10855 PF13036 Peptidoglycan-synthase activator LpoB FR741_10870 PF01230 HIT domain FR741_10875 PF00672 HAMP domain FR741_10875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FR741_10885 PF01048 Phosphorylase superfamily FR741_10890 PF00403 Heavy-metal-associated domain FR741_10895 PF00478 IMP dehydrogenase / GMP reductase domain FR741_10895 PF00571 CBS domain FR741_10900 PF00588 SpoU rRNA Methylase family FR741_10900 PF08032 RNA 2'-O ribose methyltransferase substrate binding FR741_10910 PF00990 Diguanylate cyclase, GGDEF domain FR741_10910 PF00072 Response regulator receiver domain FR741_10920 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FR741_10940 PF01037 Lrp/AsnC ligand binding domain FR741_10940 PF13404 AsnC-type helix-turn-helix domain FR741_10945 PF00291 Pyridoxal-phosphate dependent enzyme FR741_10965 PF00873 AcrB/AcrD/AcrF family FR741_10970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR741_10970 PF00529 HlyD membrane-fusion protein of T1SS FR741_11015 PF07690 Major Facilitator Superfamily FR741_11020 PF03601 Conserved hypothetical protein 698 FR741_11030 PF13193 AMP-binding enzyme C-terminal domain FR741_11030 PF00501 AMP-binding enzyme FR741_11035 PF13378 Enolase C-terminal domain-like FR741_11040 PF00378 Enoyl-CoA hydratase/isomerase FR741_11045 PF12697 Alpha/beta hydrolase family FR741_11050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FR741_11050 PF16582 Middle domain of thiamine pyrophosphate FR741_11050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FR741_11055 PF00425 chorismate binding enzyme FR741_11060 PF00155 Aminotransferase class I and II FR741_11070 PF13286 Phosphohydrolase-associated domain FR741_11070 PF01966 HD domain FR741_11090 PF13145 PPIC-type PPIASE domain FR741_11095 PF00216 Bacterial DNA-binding protein FR741_11100 PF05362 Lon protease (S16) C-terminal proteolytic domain FR741_11100 PF00004 ATPase family associated with various cellular activities (AAA) FR741_11100 PF02190 ATP-dependent protease La (LON) substrate-binding domain FR741_11105 PF06689 ClpX C4-type zinc finger FR741_11105 PF10431 C-terminal, D2-small domain, of ClpB protein FR741_11105 PF07724 AAA domain (Cdc48 subfamily) FR741_11110 PF00574 Clp protease FR741_11115 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FR741_11115 PF05698 Bacterial trigger factor protein (TF) C-terminus FR741_11115 PF05697 Bacterial trigger factor protein (TF) FR741_11125 PF02743 Cache domain FR741_11125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_11125 PF00512 His Kinase A (phospho-acceptor) domain FR741_11130 PF00072 Response regulator receiver domain FR741_11130 PF02954 Bacterial regulatory protein, Fis family FR741_11130 PF00158 Sigma-54 interaction domain FR741_11140 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FR741_11145 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FR741_11150 PF03480 Bacterial extracellular solute-binding protein, family 7 FR741_11155 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FR741_11170 PF02386 Cation transport protein FR741_11175 PF02080 TrkA-C domain FR741_11175 PF02254 TrkA-N domain FR741_11180 PF00271 Helicase conserved C-terminal domain FR741_11180 PF00270 DEAD/DEAH box helicase FR741_11185 PF00571 CBS domain FR741_11185 PF03471 Transporter associated domain FR741_11185 PF01595 Cyclin M transmembrane N-terminal domain FR741_11195 PF04820 Tryptophan halogenase FR741_11220 PF00550 Phosphopantetheine attachment site FR741_11225 PF00550 Phosphopantetheine attachment site FR741_11235 PF13193 AMP-binding enzyme C-terminal domain FR741_11235 PF00501 AMP-binding enzyme FR741_11240 PF07977 FabA-like domain FR741_11245 PF00535 Glycosyl transferase family 2 FR741_11250 PF00221 Aromatic amino acid lyase FR741_11275 PF00109 Beta-ketoacyl synthase, N-terminal domain FR741_11275 PF02801 Beta-ketoacyl synthase, C-terminal domain FR741_11280 PF07977 FabA-like domain FR741_11290 PF02801 Beta-ketoacyl synthase, C-terminal domain FR741_11290 PF00109 Beta-ketoacyl synthase, N-terminal domain FR741_11305 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FR741_11305 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FR741_11310 PF07670 Nucleoside recognition FR741_11310 PF07662 Na+ dependent nucleoside transporter C-terminus FR741_11310 PF01773 Na+ dependent nucleoside transporter N-terminus FR741_11315 PF03466 LysR substrate binding domain FR741_11315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_11320 PF13406 Transglycosylase SLT domain FR741_11325 PF05166 YcgL domain FR741_11330 PF03775 Septum formation inhibitor MinC, C-terminal domain FR741_11330 PF05209 Septum formation inhibitor MinC, N-terminal domain FR741_11335 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FR741_11340 PF03776 Septum formation topological specificity factor MinE FR741_11345 PF00570 HRDC domain FR741_11345 PF01612 3'-5' exonuclease FR741_11350 PF00501 AMP-binding enzyme FR741_11350 PF13193 AMP-binding enzyme C-terminal domain FR741_11355 PF00561 alpha/beta hydrolase fold FR741_11360 PF03843 Outer membrane lipoprotein Slp family FR741_11370 PF00814 Glycoprotease family FR741_11375 PF04851 Type III restriction enzyme, res subunit FR741_11375 PF13307 Helicase C-terminal domain FR741_11380 PF00551 Formyl transferase FR741_11380 PF01842 ACT domain FR741_11385 PF06185 YecM protein FR741_11395 PF00750 tRNA synthetases class I (R) FR741_11395 PF03485 Arginyl tRNA synthetase N terminal domain FR741_11395 PF05746 DALR anticodon binding domain FR741_11410 PF17910 FeoB cytosolic helical domain FR741_11410 PF02421 Ferrous iron transport protein B FR741_11410 PF07670 Nucleoside recognition FR741_11410 PF07664 Ferrous iron transport protein B C terminus FR741_11415 PF04023 FeoA domain FR741_11425 PF12833 Helix-turn-helix domain FR741_11425 PF02311 AraC-like ligand binding domain FR741_11430 PF01297 Zinc-uptake complex component A periplasmic FR741_11435 PF00005 ABC transporter FR741_11440 PF00950 ABC 3 transport family FR741_11445 PF00549 CoA-ligase FR741_11445 PF02629 CoA binding domain FR741_11450 PF00549 CoA-ligase FR741_11450 PF08442 ATP-grasp domain FR741_11455 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FR741_11455 PF00364 Biotin-requiring enzyme FR741_11455 PF02817 e3 binding domain FR741_11460 PF02779 Transketolase, pyrimidine binding domain FR741_11460 PF16870 2-oxoglutarate dehydrogenase C-terminal FR741_11460 PF16078 2-oxoglutarate dehydrogenase N-terminus FR741_11460 PF00676 Dehydrogenase E1 component FR741_11465 PF13085 2Fe-2S iron-sulfur cluster binding domain FR741_11470 PF02910 Fumarate reductase flavoprotein C-term FR741_11470 PF00890 FAD binding domain FR741_11475 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FR741_11480 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FR741_11485 PF00285 Citrate synthase, C-terminal domain FR741_11490 PF01784 NIF3 (NGG1p interacting factor 3) FR741_11500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FR741_11500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FR741_11500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FR741_11500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FR741_11505 PF17206 SeqA protein N-terminal domain FR741_11505 PF03925 SeqA protein C-terminal domain FR741_11510 PF12697 Alpha/beta hydrolase family FR741_11520 PF00258 Flavodoxin FR741_11530 PF01475 Ferric uptake regulator family FR741_11535 PF00749 tRNA synthetases class I (E and Q), catalytic domain FR741_11535 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FR741_11540 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FR741_11540 PF02378 Phosphotransferase system, EIIC FR741_11540 PF00367 phosphotransferase system, EIIB FR741_11550 PF01979 Amidohydrolase family FR741_11555 PF01047 MarR family FR741_11555 PF00480 ROK family FR741_11560 PF02254 TrkA-N domain FR741_11560 PF00999 Sodium/hydrogen exchanger family FR741_11565 PF13537 Glutamine amidotransferase domain FR741_11565 PF00733 Asparagine synthase FR741_11570 PF02357 Transcription termination factor nusG FR741_11575 PF00854 POT family FR741_11580 PF00762 Ferrochelatase FR741_11585 PF05191 Adenylate kinase, active site lid FR741_11590 PF00183 Hsp90 protein FR741_11590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_11595 PF00486 Transcriptional regulatory protein, C terminal FR741_11600 PF17323 Trans-membrane regulatory protein ToxS FR741_11615 PF12850 Calcineurin-like phosphoesterase superfamily domain FR741_11635 PF07556 Protein of unknown function (DUF1538) FR741_11640 PF07556 Protein of unknown function (DUF1538) FR741_11645 PF01370 NAD dependent epimerase/dehydratase family FR741_11645 PF08338 Domain of unknown function (DUF1731) FR741_11650 PF00106 short chain dehydrogenase FR741_11660 PF00085 Thioredoxin FR741_11665 PF01145 SPFH domain / Band 7 family FR741_11665 PF16200 C-terminal region of band_7 FR741_11685 PF03573 outer membrane porin, OprD family FR741_11690 PF00533 BRCA1 C Terminus (BRCT) domain FR741_11690 PF12826 Helix-hairpin-helix motif FR741_11690 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FR741_11690 PF03120 NAD-dependent DNA ligase OB-fold domain FR741_11690 PF01653 NAD-dependent DNA ligase adenylation domain FR741_11695 PF04354 ZipA, C-terminal FtsZ-binding domain FR741_11705 PF00291 Pyridoxal-phosphate dependent enzyme FR741_11715 PF00381 PTS HPr component phosphorylation site FR741_11720 PF05524 PEP-utilising enzyme, N-terminal FR741_11720 PF00391 PEP-utilising enzyme, mobile domain FR741_11720 PF02896 PEP-utilising enzyme, TIM barrel domain FR741_11725 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FR741_11730 PF07196 Flagellin hook IN motif FR741_11730 PF00669 Bacterial flagellin N-terminal helical region FR741_11730 PF00700 Bacterial flagellin C-terminal helical region FR741_11735 PF00700 Bacterial flagellin C-terminal helical region FR741_11735 PF07196 Flagellin hook IN motif FR741_11735 PF00669 Bacterial flagellin N-terminal helical region FR741_11745 PF00700 Bacterial flagellin C-terminal helical region FR741_11745 PF07196 Flagellin hook IN motif FR741_11745 PF00669 Bacterial flagellin N-terminal helical region FR741_11750 PF00669 Bacterial flagellin N-terminal helical region FR741_11755 PF07196 Flagellin hook IN motif FR741_11755 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FR741_11760 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FR741_11760 PF10135 Rod binding protein FR741_11765 PF02119 Flagellar P-ring protein FR741_11770 PF02107 Flagellar L-ring protein FR741_11775 PF00460 Flagella basal body rod protein FR741_11775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FR741_11780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FR741_11780 PF00460 Flagella basal body rod protein FR741_11785 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FR741_11785 PF07559 Flagellar basal body protein FlaE FR741_11785 PF00460 Flagella basal body rod protein FR741_11790 PF13860 FlgD Ig-like domain FR741_11790 PF03963 Flagellar hook capping protein - N-terminal region FR741_11790 PF13861 FlgD Tudor-like domain FR741_11795 PF00460 Flagella basal body rod protein FR741_11795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FR741_11800 PF00460 Flagella basal body rod protein FR741_11805 PF01739 CheR methyltransferase, SAM binding domain FR741_11805 PF03705 CheR methyltransferase, all-alpha domain FR741_11810 PF00072 Response regulator receiver domain FR741_11810 PF01584 CheW-like domain FR741_11855 PF01389 OmpA-like transmembrane domain FR741_11855 PF00691 OmpA family FR741_11860 PF00749 tRNA synthetases class I (E and Q), catalytic domain FR741_11865 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FR741_11870 PF13609 Gram-negative porin FR741_11885 PF00403 Heavy-metal-associated domain FR741_11900 PF00728 Glycosyl hydrolase family 20, catalytic domain FR741_11900 PF02838 Glycosyl hydrolase family 20, domain 2 FR741_11900 PF03173 Putative carbohydrate binding domain FR741_11900 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain FR741_11925 PF01713 Smr domain FR741_11930 PF01479 S4 domain FR741_11930 PF00849 RNA pseudouridylate synthase FR741_11935 PF04073 Aminoacyl-tRNA editing domain FR741_11940 PF00149 Calcineurin-like phosphoesterase FR741_11940 PF02872 5'-nucleotidase, C-terminal domain FR741_11945 PF00793 DAHP synthetase I family FR741_11950 PF13369 Transglutaminase-like superfamily FR741_11955 PF04247 Invasion gene expression up-regulator, SirB FR741_11960 PF13847 Methyltransferase domain FR741_11960 PF17827 PrmC N-terminal domain FR741_11965 PF00472 RF-1 domain FR741_11965 PF03462 PCRF domain FR741_11970 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FR741_11970 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FR741_11970 PF01488 Shikimate / quinate 5-dehydrogenase FR741_11975 PF03550 Outer membrane lipoprotein LolB FR741_11980 PF08544 GHMP kinases C terminal FR741_11980 PF00288 GHMP kinases N terminal domain FR741_11985 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FR741_11985 PF14572 Phosphoribosyl synthetase-associated domain FR741_11990 PF01195 Peptidyl-tRNA hydrolase FR741_11995 PF06071 Protein of unknown function (DUF933) FR741_11995 PF01926 50S ribosome-binding GTPase FR741_12100 PF01494 FAD binding domain FR741_12110 PF00919 Uncharacterized protein family UPF0004 FR741_12110 PF01938 TRAM domain FR741_12110 PF04055 Radical SAM superfamily FR741_12115 PF02562 PhoH-like protein FR741_12120 PF02130 Uncharacterized protein family UPF0054 FR741_12125 PF03471 Transporter associated domain FR741_12125 PF00571 CBS domain FR741_12130 PF00795 Carbon-nitrogen hydrolase FR741_12135 PF07295 Zinc-ribbon containing domain FR741_12140 PF00133 tRNA synthetases class I (I, L, M and V) FR741_12140 PF13603 Leucyl-tRNA synthetase, Domain 2 FR741_12140 PF08264 Anticodon-binding domain of tRNA FR741_12145 PF04390 Lipopolysaccharide-assembly FR741_12150 PF14840 Processivity clamp loader gamma complex DNA pol III C-term FR741_12150 PF06144 DNA polymerase III, delta subunit FR741_12160 PF02590 Predicted SPOUT methyltransferase FR741_12165 PF00905 Penicillin binding protein transpeptidase domain FR741_12165 PF03717 Penicillin-binding Protein dimerisation domain FR741_12170 PF01098 Cell cycle protein FR741_12175 PF03330 Lytic transglycolase FR741_12175 PF05036 Sporulation related domain FR741_12180 PF07943 Penicillin-binding protein 5, C-terminal domain FR741_12180 PF00768 D-alanyl-D-alanine carboxypeptidase FR741_12185 PF04359 Protein of unknown function (DUF493) FR741_12190 PF03099 Biotin/lipoate A/B protein ligase family FR741_12195 PF04055 Radical SAM superfamily FR741_12195 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FR741_12200 PF00464 Serine hydroxymethyltransferase FR741_12205 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FR741_12205 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FR741_12220 PF16657 Maltogenic Amylase, C-terminal domain FR741_12220 PF00128 Alpha amylase, catalytic domain FR741_12225 PF02378 Phosphotransferase system, EIIC FR741_12225 PF00367 phosphotransferase system, EIIB FR741_12230 PF00356 Bacterial regulatory proteins, lacI family FR741_12240 PF09383 NIL domain FR741_12240 PF00005 ABC transporter FR741_12245 PF00528 Binding-protein-dependent transport system inner membrane component FR741_12250 PF03180 NLPA lipoprotein FR741_12255 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) FR741_12260 PF07348 Syd protein (SUKH-2) FR741_12265 PF14489 QueF-like protein FR741_12265 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FR741_12275 PF00990 Diguanylate cyclase, GGDEF domain FR741_12275 PF00072 Response regulator receiver domain FR741_12280 PF03641 Possible lysine decarboxylase FR741_12280 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases FR741_12280 PF11892 Domain of unknown function (DUF3412) FR741_12285 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FR741_12285 PF01367 5'-3' exonuclease, C-terminal SAM fold FR741_12290 PF01728 FtsJ-like methyltransferase FR741_12290 PF18125 RlmM ferredoxin-like domain FR741_12295 PF04241 Protein of unknown function (DUF423) FR741_12305 PF03466 LysR substrate binding domain FR741_12305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_12310 PF02926 THUMP domain FR741_12310 PF02568 Thiamine biosynthesis protein (ThiI) FR741_12315 PF13677 Membrane MotB of proton-channel complex MotA/MotB FR741_12315 PF00691 OmpA family FR741_12320 PF01618 MotA/TolQ/ExbB proton channel family FR741_12325 PF02609 Exonuclease VII small subunit FR741_12330 PF00348 Polyprenyl synthetase FR741_12335 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FR741_12335 PF02780 Transketolase, C-terminal domain FR741_12335 PF02779 Transketolase, pyrimidine binding domain FR741_12340 PF04608 Phosphatidylglycerophosphatase A FR741_12345 PF02769 AIR synthase related protein, C-terminal domain FR741_12345 PF00586 AIR synthase related protein, N-terminal domain FR741_12350 PF01029 NusB family FR741_12355 PF00885 6,7-dimethyl-8-ribityllumazine synthase FR741_12360 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FR741_12360 PF00925 GTP cyclohydrolase II FR741_12365 PF00677 Lumazine binding domain FR741_12370 PF01872 RibD C-terminal domain FR741_12370 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FR741_12375 PF03477 ATP cone domain FR741_12380 PF00171 Aldehyde dehydrogenase family FR741_12385 PF01472 PUA domain FR741_12385 PF00696 Amino acid kinase family FR741_12390 PF07417 Sigma factor-binding transcriptional regulator Crl FR741_12400 PF00156 Phosphoribosyl transferase domain FR741_12405 PF00860 Permease family FR741_12410 PF07687 Peptidase dimerisation domain FR741_12410 PF01546 Peptidase family M20/M25/M40 FR741_12425 PF00593 TonB dependent receptor FR741_12425 PF07715 TonB-dependent Receptor Plug Domain FR741_12440 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FR741_12440 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FR741_12440 PF02769 AIR synthase related protein, C-terminal domain FR741_12445 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR741_12445 PF01464 Transglycosylase SLT domain FR741_12455 PF14437 MafB19-like deaminase FR741_12460 PF03806 AbgT putative transporter family FR741_12485 PF00114 Pilin (bacterial filament) FR741_12485 PF07963 Prokaryotic N-terminal methylation motif FR741_12490 PF00114 Pilin (bacterial filament) FR741_12490 PF07963 Prokaryotic N-terminal methylation motif FR741_12495 PF00684 DnaJ central domain FR741_12495 PF01556 DnaJ C terminal domain FR741_12495 PF00226 DnaJ domain FR741_12500 PF00012 Hsp70 protein FR741_12505 PF00375 Sodium:dicarboxylate symporter family FR741_12510 PF01025 GrpE FR741_12515 PF01513 ATP-NAD kinase FR741_12525 PF02463 RecF/RecN/SMC N terminal domain FR741_12530 PF04355 SmpA / OmlA family FR741_12535 PF03658 RnfH family Ubiquitin FR741_12540 PF03364 Polyketide cyclase / dehydrase and lipid transport FR741_12545 PF01668 SmpB protein FR741_12555 PF00589 Phage integrase family FR741_12555 PF13356 Arm DNA-binding domain FR741_12565 PF12833 Helix-turn-helix domain FR741_12590 PF03466 LysR substrate binding domain FR741_12590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_12595 PF00583 Acetyltransferase (GNAT) family FR741_12595 PF00795 Carbon-nitrogen hydrolase FR741_12615 PF00202 Aminotransferase class-III FR741_12620 PF01053 Cys/Met metabolism PLP-dependent enzyme FR741_12625 PF07969 Amidohydrolase family FR741_12635 PF01266 FAD dependent oxidoreductase FR741_12640 PF01235 Sodium:alanine symporter family FR741_12645 PF01184 GPR1/FUN34/yaaH family FR741_12650 PF06483 Chitinase C FR741_12650 PF00704 Glycosyl hydrolases family 18 FR741_12655 PF03553 Na+/H+ antiporter family FR741_12720 PF00589 Phage integrase family FR741_12720 PF13356 Arm DNA-binding domain FR741_12725 PF02540 NAD synthase FR741_12725 PF00958 GMP synthase C terminal domain FR741_12725 PF00117 Glutamine amidotransferase class-I FR741_12730 PF00478 IMP dehydrogenase / GMP reductase domain FR741_12730 PF00571 CBS domain FR741_12735 PF13742 OB-fold nucleic acid binding domain FR741_12735 PF02601 Exonuclease VII, large subunit FR741_12750 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FR741_12750 PF01926 50S ribosome-binding GTPase FR741_12755 PF13360 PQQ-like domain FR741_12760 PF09976 Tetratricopeptide repeat-like domain FR741_12765 PF03129 Anticodon binding domain FR741_12765 PF13393 Histidyl-tRNA synthetase FR741_12770 PF04551 GcpE protein FR741_12775 PF13464 Domain of unknown function (DUF4115) FR741_12785 PF04055 Radical SAM superfamily FR741_12790 PF00334 Nucleoside diphosphate kinase FR741_12795 PF12404 Peptidase FR741_12795 PF00883 Cytosol aminopeptidase family, catalytic domain FR741_12800 PF04384 Iron-sulphur cluster assembly FR741_12805 PF00111 2Fe-2S iron-sulfur cluster binding domain FR741_12810 PF00012 Hsp70 protein FR741_12815 PF07743 HSCB C-terminal oligomerisation domain FR741_12815 PF00226 DnaJ domain FR741_12820 PF01521 Iron-sulphur cluster biosynthesis FR741_12825 PF01592 NifU-like N terminal domain FR741_12830 PF00266 Aminotransferase class-V FR741_12835 PF02082 Transcriptional regulator FR741_12840 PF00588 SpoU rRNA Methylase family FR741_12845 PF00459 Inositol monophosphatase family FR741_12850 PF07549 SecD/SecF GG Motif FR741_12850 PF02355 Protein export membrane protein FR741_12855 PF02355 Protein export membrane protein FR741_12855 PF13721 SecD export protein N-terminal TM region FR741_12855 PF07549 SecD/SecF GG Motif FR741_12860 PF02699 Preprotein translocase subunit FR741_12865 PF01702 Queuine tRNA-ribosyltransferase FR741_12870 PF02547 Queuosine biosynthesis protein FR741_12885 PF00571 CBS domain FR741_12890 PF00463 Isocitrate lyase family FR741_12895 PF01274 Malate synthase FR741_12900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_12900 PF03466 LysR substrate binding domain FR741_12905 PF00578 AhpC/TSA family FR741_12905 PF10417 C-terminal domain of 1-Cys peroxiredoxin FR741_12910 PF03932 CutC family FR741_12915 PF03976 Polyphosphate kinase 2 (PPK2) FR741_12920 PF01895 PhoU domain FR741_12925 PF00005 ABC transporter FR741_12930 PF00528 Binding-protein-dependent transport system inner membrane component FR741_12935 PF00528 Binding-protein-dependent transport system inner membrane component FR741_12940 PF17941 Polyphosphate kinase C-terminal domain 1 FR741_12940 PF02503 Polyphosphate kinase middle domain FR741_12940 PF13089 Polyphosphate kinase N-terminal domain FR741_12940 PF13090 Polyphosphate kinase C-terminal domain 2 FR741_12945 PF02541 Ppx/GppA phosphatase family FR741_12950 PF12849 PBP superfamily domain FR741_12955 PF11808 Phosphate regulon sensor protein PhoR FR741_12955 PF00989 PAS fold FR741_12955 PF00512 His Kinase A (phospho-acceptor) domain FR741_12955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_12960 PF00486 Transcriptional regulatory protein, C terminal FR741_12960 PF00072 Response regulator receiver domain FR741_12970 PF04381 Putative exonuclease, RdgC FR741_12980 PF00037 4Fe-4S binding domain FR741_12990 PF03411 Penicillin-insensitive murein endopeptidase FR741_13040 PF02861 Clp amino terminal domain, pathogenicity island component FR741_13040 PF07724 AAA domain (Cdc48 subfamily) FR741_13040 PF00004 ATPase family associated with various cellular activities (AAA) FR741_13040 PF10431 C-terminal, D2-small domain, of ClpB protein FR741_13040 PF17871 AAA lid domain FR741_13050 PF01479 S4 domain FR741_13050 PF00849 RNA pseudouridylate synthase FR741_13055 PF13525 Outer membrane lipoprotein FR741_13060 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR741_13060 PF01464 Transglycosylase SLT domain FR741_13065 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FR741_13070 PF00800 Prephenate dehydratase FR741_13070 PF01817 Chorismate mutase type II FR741_13075 PF01931 Protein of unknown function DUF84 FR741_13080 PF01371 Trp repressor protein FR741_13085 PF01464 Transglycosylase SLT domain FR741_13085 PF14718 Soluble lytic murein transglycosylase L domain FR741_13090 PF00005 ABC transporter FR741_13090 PF12848 ABC transporter FR741_13095 PF07238 PilZ domain FR741_13100 PF01551 Peptidase family M23 FR741_13100 PF01464 Transglycosylase SLT domain FR741_13100 PF10145 Phage-related minor tail protein FR741_13105 PF01817 Chorismate mutase type II FR741_13105 PF02153 Prephenate dehydrogenase FR741_13110 PF00793 DAHP synthetase I family FR741_13115 PF00933 Glycosyl hydrolase family 3 N terminal domain FR741_13120 PF03702 Anhydro-N-acetylmuramic acid kinase FR741_13125 PF01380 SIS domain FR741_13140 PF02554 Carbon starvation protein CstA FR741_13145 PF07694 5TMR of 5TMR-LYT FR741_13145 PF06580 Histidine kinase FR741_13150 PF00072 Response regulator receiver domain FR741_13150 PF04397 LytTr DNA-binding domain FR741_13160 PF02401 LytB protein FR741_13165 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FR741_13170 PF01252 Signal peptidase (SPase) II FR741_13175 PF08264 Anticodon-binding domain of tRNA FR741_13175 PF06827 Zinc finger found in FPG and IleRS FR741_13175 PF00133 tRNA synthetases class I (I, L, M and V) FR741_13180 PF06574 FAD synthetase FR741_13180 PF01687 Riboflavin kinase FR741_13185 PF03023 Lipid II flippase MurJ FR741_13190 PF01649 Ribosomal protein S20 FR741_13195 PF01022 Bacterial regulatory protein, arsR family FR741_13200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_13200 PF03466 LysR substrate binding domain FR741_13205 PF02690 Na+/Pi-cotransporter FR741_13215 PF00303 Thymidylate synthase FR741_13225 PF01925 Sulfite exporter TauE/SafE FR741_13230 PF01590 GAF domain FR741_13230 PF02896 PEP-utilising enzyme, TIM barrel domain FR741_13230 PF05524 PEP-utilising enzyme, N-terminal FR741_13230 PF00391 PEP-utilising enzyme, mobile domain FR741_13235 PF00293 NUDIX domain FR741_13240 PF02976 DNA mismatch repair enzyme MutH FR741_13250 PF00248 Aldo/keto reductase family FR741_13260 PF00158 Sigma-54 interaction domain FR741_13260 PF00072 Response regulator receiver domain FR741_13260 PF02954 Bacterial regulatory protein, Fis family FR741_13265 PF01336 OB-fold nucleic acid binding domain FR741_13265 PF00152 tRNA synthetases class II (D, K and N) FR741_13275 PF01368 DHH family FR741_13275 PF17768 RecJ OB domain FR741_13275 PF02272 DHHA1 domain FR741_13280 PF10411 Disulfide bond isomerase protein N-terminus FR741_13280 PF13098 Thioredoxin-like domain FR741_13285 PF00589 Phage integrase family FR741_13285 PF02899 Phage integrase, N-terminal SAM-like domain FR741_13290 PF00258 Flavodoxin FR741_13295 PF05525 Branched-chain amino acid transport protein FR741_13300 PF05175 Methyltransferase small domain FR741_13305 PF00270 DEAD/DEAH box helicase FR741_13305 PF00271 Helicase conserved C-terminal domain FR741_13310 PF03883 Peroxide stress protein YaaA FR741_13315 PF01235 Sodium:alanine symporter family FR741_13330 PF03167 Uracil DNA glycosylase superfamily FR741_13340 PF01261 Xylose isomerase-like TIM barrel FR741_13345 PF01228 Glycine radical FR741_13355 PF00291 Pyridoxal-phosphate dependent enzyme FR741_13355 PF14821 Threonine synthase N terminus FR741_13360 PF08544 GHMP kinases C terminal FR741_13360 PF00288 GHMP kinases N terminal domain FR741_13365 PF00696 Amino acid kinase family FR741_13365 PF00742 Homoserine dehydrogenase FR741_13365 PF01842 ACT domain FR741_13365 PF03447 Homoserine dehydrogenase, NAD binding domain FR741_13365 PF13840 ACT domain FR741_13380 PF03737 Aldolase/RraA FR741_13395 PF00072 Response regulator receiver domain FR741_13395 PF00486 Transcriptional regulatory protein, C terminal FR741_13405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_13405 PF00072 Response regulator receiver domain FR741_13405 PF01627 Hpt domain FR741_13405 PF00512 His Kinase A (phospho-acceptor) domain FR741_13405 PF18415 Histidine kinase receptor ArcB trans-membrane domain FR741_13405 PF00989 PAS fold FR741_13410 PF00563 EAL domain FR741_13410 PF01590 GAF domain FR741_13410 PF00990 Diguanylate cyclase, GGDEF domain FR741_13410 PF00360 Phytochrome region FR741_13415 PF04055 Radical SAM superfamily FR741_13415 PF16199 Radical_SAM C-terminal domain FR741_13420 PF00310 Glutamine amidotransferases class-II FR741_13420 PF04898 Glutamate synthase central domain FR741_13420 PF01645 Conserved region in glutamate synthase FR741_13420 PF01493 GXGXG motif FR741_13425 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FR741_13425 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR741_13430 PF01493 GXGXG motif FR741_13430 PF00310 Glutamine amidotransferases class-II FR741_13430 PF01645 Conserved region in glutamate synthase FR741_13430 PF04898 Glutamate synthase central domain FR741_13435 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FR741_13435 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR741_13445 PF01048 Phosphorylase superfamily FR741_13450 PF03186 CobD/Cbib protein FR741_13450 PF17113 Regulatory signalling modulator protein AmpE FR741_13455 PF01497 Periplasmic binding protein FR741_13460 PF03458 UPF0126 domain FR741_13465 PF03466 LysR substrate binding domain FR741_13465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_13470 PF01925 Sulfite exporter TauE/SafE FR741_13490 PF02142 MGS-like domain FR741_13490 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FR741_13490 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FR741_13495 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FR741_13495 PF00117 Glutamine amidotransferase class-I FR741_13500 PF01113 Dihydrodipicolinate reductase, N-terminus FR741_13500 PF05173 Dihydrodipicolinate reductase, C-terminus FR741_13505 PF00293 NUDIX domain FR741_13510 PF07516 SecA Wing and Scaffold domain FR741_13510 PF07517 SecA DEAD-like domain FR741_13510 PF01043 SecA preprotein cross-linking domain FR741_13510 PF02810 SEC-C motif FR741_13520 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FR741_13525 PF00091 Tubulin/FtsZ family, GTPase domain FR741_13525 PF12327 FtsZ family, C-terminal domain FR741_13530 PF02491 SHS2 domain inserted in FTSA FR741_13535 PF03799 Cell division protein FtsQ FR741_13535 PF08478 POTRA domain, FtsQ-type FR741_13540 PF01225 Mur ligase family, catalytic domain FR741_13540 PF02875 Mur ligase family, glutamate ligase domain FR741_13540 PF08245 Mur ligase middle domain FR741_13545 PF04101 Glycosyltransferase family 28 C-terminal domain FR741_13545 PF03033 Glycosyltransferase family 28 N-terminal domain FR741_13550 PF01098 Cell cycle protein FR741_13555 PF08245 Mur ligase middle domain FR741_13555 PF02875 Mur ligase family, glutamate ligase domain FR741_13560 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FR741_13560 PF00953 Glycosyl transferase family 4 FR741_13565 PF08245 Mur ligase middle domain FR741_13565 PF01225 Mur ligase family, catalytic domain FR741_13565 PF02875 Mur ligase family, glutamate ligase domain FR741_13570 PF01225 Mur ligase family, catalytic domain FR741_13570 PF08245 Mur ligase middle domain FR741_13570 PF02875 Mur ligase family, glutamate ligase domain FR741_13575 PF03717 Penicillin-binding Protein dimerisation domain FR741_13575 PF00905 Penicillin binding protein transpeptidase domain FR741_13580 PF04999 Cell division protein FtsL FR741_13585 PF01795 MraW methylase family FR741_13595 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FR741_13600 PF04348 LppC putative lipoprotein FR741_13605 PF02021 Uncharacterised protein family UPF0102 FR741_13610 PF13580 SIS domain FR741_13615 PF04972 BON domain FR741_13620 PF04386 Stringent starvation protein B FR741_13625 PF02798 Glutathione S-transferase, N-terminal domain FR741_13625 PF00043 Glutathione S-transferase, C-terminal domain FR741_13630 PF02167 Cytochrome C1 family FR741_13635 PF00033 Cytochrome b/b6/petB FR741_13635 PF00032 Cytochrome b(C-terminal)/b6/petD FR741_13640 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FR741_13640 PF00355 Rieske [2Fe-2S] domain FR741_13645 PF00380 Ribosomal protein S9/S16 FR741_13650 PF00572 Ribosomal protein L13 FR741_13660 PF03969 AFG1-like ATPase FR741_13670 PF06295 Protein of unknown function (DUF1043) FR741_13675 PF00595 PDZ domain FR741_13680 PF13180 PDZ domain FR741_13685 PF00521 DNA gyrase/topoisomerase IV, subunit A FR741_13685 PF03989 DNA gyrase C-terminal domain, beta-propeller FR741_13690 PF00204 DNA gyrase B FR741_13690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_13690 PF00986 DNA gyrase B subunit, carboxyl terminus FR741_13690 PF01751 Toprim domain FR741_13695 PF05728 Uncharacterised protein family (UPF0227) FR741_13700 PF00149 Calcineurin-like phosphoesterase FR741_13705 PF06853 Protein of unknown function (DUF1249) FR741_13710 PF00293 NUDIX domain FR741_13715 PF02321 Outer membrane efflux protein FR741_13720 PF00294 pfkB family carbohydrate kinase FR741_13720 PF01467 Cytidylyltransferase-like FR741_13725 PF08335 GlnD PII-uridylyltransferase FR741_13725 PF03710 Glutamate-ammonia ligase adenylyltransferase FR741_13730 PF00672 HAMP domain FR741_13730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FR741_13730 PF02743 Cache domain FR741_13740 PF01928 CYTH domain FR741_13745 PF01865 Protein of unknown function DUF47 FR741_13750 PF01384 Phosphate transporter family FR741_13755 PF08239 Bacterial SH3 domain FR741_13770 PF13401 AAA domain FR741_13770 PF01471 Putative peptidoglycan binding domain FR741_13775 PF01743 Poly A polymerase head domain FR741_13775 PF01966 HD domain FR741_13775 PF12627 Probable RNA and SrmB- binding site of polymerase A FR741_13780 PF02673 Bacitracin resistance protein BacA FR741_13785 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FR741_13790 PF02152 Dihydroneopterin aldolase FR741_13795 PF02660 Glycerol-3-phosphate acyltransferase FR741_13800 PF00561 alpha/beta hydrolase fold FR741_13805 PF00814 Glycoprotease family FR741_13810 PF01165 Ribosomal protein S21 FR741_13815 PF09424 Yqey-like protein FR741_13820 PF01807 CHC2 zinc finger FR741_13820 PF08275 DNA primase catalytic core, N-terminal domain FR741_13820 PF08278 DNA primase DnaG DnaB-binding FR741_13820 PF10410 DnaB-helicase binding domain of primase FR741_13825 PF04539 Sigma-70 region 3 FR741_13825 PF04545 Sigma-70, region 4 FR741_13825 PF04542 Sigma-70 region 2 FR741_13825 PF00140 Sigma-70 factor, region 1.2 FR741_13825 PF03979 Sigma-70 factor, region 1.1 FR741_13825 PF04546 Sigma-70, non-essential region FR741_13855 PF02463 RecF/RecN/SMC N terminal domain FR741_13900 PF01695 IstB-like ATP binding protein FR741_13940 PF13356 Arm DNA-binding domain FR741_13940 PF14659 Phage integrase, N-terminal SAM-like domain FR741_13940 PF00589 Phage integrase family FR741_13965 PF00589 Phage integrase family FR741_13965 PF02899 Phage integrase, N-terminal SAM-like domain FR741_14020 PF03180 NLPA lipoprotein FR741_14055 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FR741_14055 PF02378 Phosphotransferase system, EIIC FR741_14055 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FR741_14060 PF08125 Mannitol dehydrogenase C-terminal domain FR741_14060 PF01232 Mannitol dehydrogenase Rossmann domain FR741_14065 PF05068 Mannitol repressor FR741_14070 PF00989 PAS fold FR741_14070 PF00158 Sigma-54 interaction domain FR741_14070 PF02954 Bacterial regulatory protein, Fis family FR741_14075 PF05524 PEP-utilising enzyme, N-terminal FR741_14075 PF00391 PEP-utilising enzyme, mobile domain FR741_14075 PF02896 PEP-utilising enzyme, TIM barrel domain FR741_14080 PF02734 DAK2 domain FR741_14085 PF02733 Dak1 domain FR741_14090 PF00465 Iron-containing alcohol dehydrogenase FR741_14095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_14095 PF00512 His Kinase A (phospho-acceptor) domain FR741_14095 PF00672 HAMP domain FR741_14100 PF00072 Response regulator receiver domain FR741_14100 PF00486 Transcriptional regulatory protein, C terminal FR741_14110 PF01380 SIS domain FR741_14115 PF08220 DeoR-like helix-turn-helix domain FR741_14115 PF00455 DeoR C terminal sensor domain FR741_14120 PF00224 Pyruvate kinase, barrel domain FR741_14120 PF02887 Pyruvate kinase, alpha/beta domain FR741_14130 PF00990 Diguanylate cyclase, GGDEF domain FR741_14130 PF07694 5TMR of 5TMR-LYT FR741_14135 PF10369 Small subunit of acetolactate synthase FR741_14140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FR741_14140 PF00205 Thiamine pyrophosphate enzyme, central domain FR741_14140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FR741_14145 PF00501 AMP-binding enzyme FR741_14150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_14150 PF03466 LysR substrate binding domain FR741_14160 PF01569 PAP2 superfamily FR741_14175 PF00682 HMGL-like FR741_14175 PF08502 LeuA allosteric (dimerisation) domain FR741_14180 PF00180 Isocitrate/isopropylmalate dehydrogenase FR741_14185 PF00330 Aconitase family (aconitate hydratase) FR741_14190 PF00694 Aconitase C-terminal domain FR741_14200 PF05099 Tellurite resistance protein TerB FR741_14200 PF00226 DnaJ domain FR741_14205 PF03968 OstA-like protein FR741_14205 PF04453 LPS transport system D FR741_14210 PF09312 SurA N-terminal domain FR741_14215 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FR741_14220 PF00398 Ribosomal RNA adenine dimethylase FR741_14225 PF04379 ApaG domain FR741_14230 PF00149 Calcineurin-like phosphoesterase FR741_14235 PF00186 Dihydrofolate reductase FR741_14240 PF12821 Threonine/Serine exporter, ThrE FR741_14245 PF06738 Putative threonine/serine exporter FR741_14250 PF01018 GTP1/OBG FR741_14250 PF01926 50S ribosome-binding GTPase FR741_14255 PF01016 Ribosomal L27 protein FR741_14260 PF00829 Ribosomal prokaryotic L21 protein FR741_14265 PF00348 Polyprenyl synthetase FR741_14275 PF00056 lactate/malate dehydrogenase, NAD binding domain FR741_14275 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FR741_14280 PF02863 Arginine repressor, C-terminal domain FR741_14280 PF01316 Arginine repressor, DNA binding domain FR741_14290 PF16868 NMT1-like family FR741_14310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FR741_14315 PF03466 LysR substrate binding domain FR741_14315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_14320 PF00005 ABC transporter FR741_14325 PF00528 Binding-protein-dependent transport system inner membrane component FR741_14335 PF02441 Flavoprotein FR741_14340 PF02875 Mur ligase family, glutamate ligase domain FR741_14340 PF08245 Mur ligase middle domain FR741_14340 PF01225 Mur ligase family, catalytic domain FR741_14350 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FR741_14355 PF00719 Inorganic pyrophosphatase FR741_14365 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like FR741_14370 PF04357 TamB, inner membrane protein subunit of TAM complex FR741_14375 PF17243 POTRA domain TamA domain 1 FR741_14375 PF01103 Surface antigen FR741_14380 PF01625 Peptide methionine sulfoxide reductase FR741_14385 PF06526 Protein of unknown function (DUF1107) FR741_14390 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) FR741_14395 PF10795 Protein of unknown function (DUF2607) FR741_14405 PF00005 ABC transporter FR741_14430 PF03600 Citrate transporter FR741_14430 PF02080 TrkA-C domain FR741_14435 PF00009 Elongation factor Tu GTP binding domain FR741_14440 PF01507 Phosphoadenosine phosphosulfate reductase family FR741_14445 PF14824 Sirohaem biosynthesis protein central FR741_14445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FR741_14445 PF10414 Sirohaem synthase dimerisation region FR741_14450 PF02872 5'-nucleotidase, C-terminal domain FR741_14450 PF00149 Calcineurin-like phosphoesterase FR741_14460 PF03880 DbpA RNA binding domain FR741_14460 PF00271 Helicase conserved C-terminal domain FR741_14460 PF00270 DEAD/DEAH box helicase FR741_14465 PF13673 Acetyltransferase (GNAT) domain FR741_14475 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FR741_14475 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FR741_14485 PF01196 Ribosomal protein L17 FR741_14490 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FR741_14490 PF01000 RNA polymerase Rpb3/RpoA insert domain FR741_14490 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FR741_14495 PF01479 S4 domain FR741_14495 PF00163 Ribosomal protein S4/S9 N-terminal domain FR741_14500 PF00411 Ribosomal protein S11 FR741_14505 PF00416 Ribosomal protein S13/S18 FR741_14510 PF00444 Ribosomal protein L36 FR741_14515 PF00344 SecY translocase FR741_14525 PF00327 Ribosomal protein L30p/L7e FR741_14530 PF00333 Ribosomal protein S5, N-terminal domain FR741_14530 PF03719 Ribosomal protein S5, C-terminal domain FR741_14535 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FR741_14540 PF00347 Ribosomal protein L6 FR741_14545 PF00410 Ribosomal protein S8 FR741_14550 PF00253 Ribosomal protein S14p/S29e FR741_14555 PF00673 ribosomal L5P family C-terminus FR741_14555 PF00281 Ribosomal protein L5 FR741_14560 PF00467 KOW motif FR741_14560 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FR741_14565 PF00238 Ribosomal protein L14p/L23e FR741_14570 PF00366 Ribosomal protein S17 FR741_14575 PF00831 Ribosomal L29 protein FR741_14580 PF00252 Ribosomal protein L16p/L10e FR741_14585 PF07650 KH domain FR741_14585 PF00189 Ribosomal protein S3, C-terminal domain FR741_14590 PF00237 Ribosomal protein L22p/L17e FR741_14595 PF00203 Ribosomal protein S19 FR741_14600 PF03947 Ribosomal Proteins L2, C-terminal domain FR741_14600 PF00181 Ribosomal Proteins L2, RNA binding domain FR741_14605 PF00276 Ribosomal protein L23 FR741_14610 PF00573 Ribosomal protein L4/L1 family FR741_14615 PF00297 Ribosomal protein L3 FR741_14620 PF00338 Ribosomal protein S10p/S20e FR741_14625 PF01197 Ribosomal protein L31 FR741_14635 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FR741_14635 PF00270 DEAD/DEAH box helicase FR741_14635 PF00271 Helicase conserved C-terminal domain FR741_14635 PF17764 3′ DNA-binding domain (3′BD) FR741_14635 PF18074 Primosomal protein N C-terminal domain FR741_14640 PF00356 Bacterial regulatory proteins, lacI family FR741_14650 PF00227 Proteasome subunit FR741_14655 PF00004 ATPase family associated with various cellular activities (AAA) FR741_14655 PF07724 AAA domain (Cdc48 subfamily) FR741_14660 PF01040 UbiA prenyltransferase family FR741_14665 PF03737 Aldolase/RraA FR741_14670 PF06005 Cell division protein ZapB FR741_14680 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded FR741_14685 PF00455 DeoR C terminal sensor domain FR741_14685 PF08220 DeoR-like helix-turn-helix domain FR741_14710 PF00121 Triosephosphate isomerase FR741_14715 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FR741_14715 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FR741_14715 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FR741_14725 PF02719 Polysaccharide biosynthesis protein FR741_14730 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FR741_14740 PF02397 Bacterial sugar transferase FR741_14745 PF00534 Glycosyl transferases group 1 FR741_14745 PF13477 Glycosyl transferase 4-like FR741_14755 PF00535 Glycosyl transferase family 2 FR741_14770 PF01370 NAD dependent epimerase/dehydratase family FR741_14780 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FR741_14780 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FR741_14780 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FR741_14785 PF10996 Beta-Casp domain FR741_14785 PF00753 Metallo-beta-lactamase superfamily FR741_14785 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FR741_14790 PF00953 Glycosyl transferase family 4 FR741_14795 PF00793 DAHP synthetase I family FR741_14800 PF02348 Cytidylyltransferase FR741_14805 PF05159 Capsule polysaccharide biosynthesis protein FR741_14820 PF00005 ABC transporter FR741_14825 PF01061 ABC-2 type transporter FR741_14830 PF01380 SIS domain FR741_14830 PF00571 CBS domain FR741_14840 PF10531 SLBB domain FR741_14840 PF02563 Polysaccharide biosynthesis/export protein FR741_14855 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF FR741_14865 PF06082 Exopolysaccharide biosynthesis protein YbjH FR741_14870 PF01370 NAD dependent epimerase/dehydratase family FR741_14875 PF03279 Bacterial lipid A biosynthesis acyltransferase FR741_14880 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FR741_14885 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FR741_14890 PF07922 Glycosyltransferase family 52 FR741_14895 PF02348 Cytidylyltransferase FR741_14900 PF00483 Nucleotidyl transferase FR741_14910 PF03102 NeuB family FR741_14910 PF08666 SAF domain FR741_14915 PF02350 UDP-N-acetylglucosamine 2-epimerase FR741_14920 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FR741_14925 PF02719 Polysaccharide biosynthesis protein FR741_14935 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FR741_14945 PF00483 Nucleotidyl transferase FR741_14950 PF16363 GDP-mannose 4,6 dehydratase FR741_14960 PF01219 Prokaryotic diacylglycerol kinase FR741_14965 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FR741_14970 PF00535 Glycosyl transferase family 2 FR741_14975 PF00535 Glycosyl transferase family 2 FR741_14980 PF01467 Cytidylyltransferase-like FR741_14985 PF05686 Glycosyl transferase family 90 FR741_14995 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FR741_14995 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FR741_14995 PF06827 Zinc finger found in FPG and IleRS FR741_15005 PF00471 Ribosomal protein L33 FR741_15010 PF00830 Ribosomal L28 family FR741_15015 PF04002 RadC-like JAB domain FR741_15020 PF17200 Single Cache domain 2 FR741_15020 PF00672 HAMP domain FR741_15020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FR741_15030 PF04127 DNA / pantothenate metabolism flavoprotein FR741_15030 PF02441 Flavoprotein FR741_15035 PF00440 Bacterial regulatory proteins, tetR family FR741_15040 PF03279 Bacterial lipid A biosynthesis acyltransferase FR741_15045 PF00156 Phosphoribosyl transferase domain FR741_15050 PF01138 3' exoribonuclease family, domain 1 FR741_15050 PF03725 3' exoribonuclease family, domain 2 FR741_15060 PF08340 Domain of unknown function (DUF1732) FR741_15060 PF03755 YicC-like family, N-terminal region FR741_15075 PF02423 Ornithine cyclodeaminase/mu-crystallin family FR741_15095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR741_15095 PF00005 ABC transporter FR741_15100 PF00005 ABC transporter FR741_15100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR741_15105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR741_15110 PF12911 N-terminal TM domain of oligopeptide transport permease C FR741_15110 PF00528 Binding-protein-dependent transport system inner membrane component FR741_15115 PF00528 Binding-protein-dependent transport system inner membrane component FR741_15125 PF00593 TonB dependent receptor FR741_15125 PF07715 TonB-dependent Receptor Plug Domain FR741_15140 PF01618 MotA/TolQ/ExbB proton channel family FR741_15145 PF02472 Biopolymer transport protein ExbD/TolR FR741_15160 PF00625 Guanylate kinase FR741_15165 PF01192 RNA polymerase Rpb6 FR741_15170 PF02824 TGS domain FR741_15170 PF04607 Region found in RelA / SpoT proteins FR741_15170 PF13291 ACT domain FR741_15175 PF12105 SpoU, rRNA methylase, C-terminal FR741_15175 PF00588 SpoU rRNA Methylase family FR741_15180 PF17191 RecG wedge domain FR741_15180 PF00271 Helicase conserved C-terminal domain FR741_15180 PF00270 DEAD/DEAH box helicase FR741_15185 PF00860 Permease family FR741_15190 PF00672 HAMP domain FR741_15190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_15190 PF00512 His Kinase A (phospho-acceptor) domain FR741_15195 PF00072 Response regulator receiver domain FR741_15195 PF00486 Transcriptional regulatory protein, C terminal FR741_15205 PF03449 Transcription elongation factor, N-terminal FR741_15205 PF01272 Transcription elongation factor, GreA/GreB, C-term FR741_15215 PF17674 HHH domain FR741_15215 PF00575 S1 RNA binding domain FR741_15215 PF16921 Tex protein YqgF-like domain FR741_15215 PF09371 Tex-like protein N-terminal domain FR741_15225 PF00561 alpha/beta hydrolase fold FR741_15230 PF00156 Phosphoribosyl transferase domain FR741_15235 PF01521 Iron-sulphur cluster biosynthesis FR741_15235 PF01106 NifU-like domain FR741_15240 PF00293 NUDIX domain FR741_15245 PF00459 Inositol monophosphatase family FR741_15250 PF01203 Type II secretion system (T2SS), protein N FR741_15255 PF04612 Type II secretion system (T2SS), protein M FR741_15260 PF05134 Type II secretion system (T2SS), protein L FR741_15260 PF12693 GspL periplasmic domain FR741_15265 PF03934 Type II secretion system (T2SS), protein K FR741_15270 PF11612 Type II secretion system (T2SS), protein J FR741_15270 PF07963 Prokaryotic N-terminal methylation motif FR741_15275 PF07963 Prokaryotic N-terminal methylation motif FR741_15275 PF02501 Type II secretion system (T2SS), protein I FR741_15280 PF12019 Type II transport protein GspH FR741_15285 PF08334 Type II secretion system (T2SS), protein G FR741_15285 PF07963 Prokaryotic N-terminal methylation motif FR741_15290 PF00482 Type II secretion system (T2SS), protein F FR741_15295 PF00437 Type II/IV secretion system protein FR741_15300 PF00263 Bacterial type II and III secretion system protein FR741_15300 PF03958 Bacterial type II/III secretion system short domain FR741_15305 PF11356 Type II secretion system protein C FR741_15310 PF01479 S4 domain FR741_15315 PF01430 Hsp33 protein FR741_15320 PF01293 Phosphoenolpyruvate carboxykinase FR741_15330 PF00583 Acetyltransferase (GNAT) family FR741_15330 PF09500 Putative thioesterase (yiiD_Cterm) FR741_15335 PF02580 D-Tyr-tRNA(Tyr) deacylase FR741_15340 PF03631 Virulence factor BrkB FR741_15365 PF03951 Glutamine synthetase, beta-Grasp domain FR741_15365 PF00120 Glutamine synthetase, catalytic domain FR741_15375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_15375 PF00512 His Kinase A (phospho-acceptor) domain FR741_15375 PF00989 PAS fold FR741_15380 PF02954 Bacterial regulatory protein, Fis family FR741_15380 PF00158 Sigma-54 interaction domain FR741_15380 PF00072 Response regulator receiver domain FR741_15385 PF03707 Bacterial signalling protein N terminal repeat FR741_15385 PF00990 Diguanylate cyclase, GGDEF domain FR741_15385 PF00563 EAL domain FR741_15390 PF00962 Adenosine/AMP deaminase FR741_15395 PF04055 Radical SAM superfamily FR741_15395 PF06969 HemN C-terminal domain FR741_15400 PF10675 Protein of unknown function (DUF2489) FR741_15405 PF04220 Der GTPase activator (YihI) FR741_15420 PF00034 Cytochrome c FR741_15425 PF01926 50S ribosome-binding GTPase FR741_15430 PF01612 3'-5' exonuclease FR741_15430 PF01367 5'-3' exonuclease, C-terminal SAM fold FR741_15430 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FR741_15430 PF00476 DNA polymerase family A FR741_15440 PF00583 Acetyltransferase (GNAT) family FR741_15445 PF00490 Delta-aminolevulinic acid dehydratase FR741_15455 PF01026 TatD related DNase FR741_15465 PF00902 Sec-independent protein translocase protein (TatC) FR741_15470 PF02416 mttA/Hcf106 family FR741_15475 PF02416 mttA/Hcf106 family FR741_15480 PF03109 ABC1 family FR741_15485 PF02036 SCP-2 sterol transfer family FR741_15490 PF01209 ubiE/COQ5 methyltransferase family FR741_15495 PF02646 RmuC family FR741_15505 PF00563 EAL domain FR741_15505 PF03707 Bacterial signalling protein N terminal repeat FR741_15505 PF00990 Diguanylate cyclase, GGDEF domain FR741_15510 PF01594 AI-2E family transporter FR741_15540 PF00781 Diacylglycerol kinase catalytic domain FR741_15565 PF01590 GAF domain FR741_15565 PF02954 Bacterial regulatory protein, Fis family FR741_15565 PF00158 Sigma-54 interaction domain FR741_15575 PF10625 Universal stress protein B (UspB) FR741_15580 PF00210 Ferritin-like domain FR741_15585 PF00582 Universal stress protein family FR741_15590 PF00892 EamA-like transporter family FR741_15600 PF04445 Putative SAM-dependent methyltransferase FR741_15605 PF00563 EAL domain FR741_15605 PF08448 PAS fold FR741_15605 PF00990 Diguanylate cyclase, GGDEF domain FR741_15610 PF01037 Lrp/AsnC ligand binding domain FR741_15615 PF01432 Peptidase family M3 FR741_15625 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FR741_15630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FR741_15630 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR741_15635 PF03466 LysR substrate binding domain FR741_15635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_15640 PF01048 Phosphorylase superfamily FR741_15645 PF01081 KDPG and KHG aldolase FR741_15650 PF02447 GntP family permease FR741_15655 PF01202 Shikimate kinase FR741_15660 PF00920 Dehydratase family FR741_15665 PF00893 Small Multidrug Resistance protein FR741_15670 PF00893 Small Multidrug Resistance protein FR741_15675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_15675 PF03466 LysR substrate binding domain FR741_15680 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FR741_15680 PF00356 Bacterial regulatory proteins, lacI family FR741_15720 PF12911 N-terminal TM domain of oligopeptide transport permease C FR741_15720 PF00528 Binding-protein-dependent transport system inner membrane component FR741_15730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR741_15735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR741_15735 PF00005 ABC transporter FR741_15745 PF13419 Haloacid dehalogenase-like hydrolase FR741_15775 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FR741_15780 PF13361 UvrD-like helicase C-terminal domain FR741_15780 PF00580 UvrD/REP helicase N-terminal domain FR741_15785 PF00440 Bacterial regulatory proteins, tetR family FR741_15785 PF16295 Tetracyclin repressor-like, C-terminal domain FR741_15790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR741_15795 PF00873 AcrB/AcrD/AcrF family FR741_15800 PF04380 Membrane fusogenic activity FR741_15805 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FR741_15805 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FR741_15810 PF03466 LysR substrate binding domain FR741_15810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_15855 PF12724 Flavodoxin domain FR741_15860 PF02386 Cation transport protein FR741_15865 PF01205 Uncharacterized protein family UPF0029 FR741_15865 PF09186 Domain of unknown function (DUF1949) FR741_15870 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FR741_15870 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FR741_15870 PF00378 Enoyl-CoA hydratase/isomerase FR741_15875 PF00108 Thiolase, N-terminal domain FR741_15875 PF02803 Thiolase, C-terminal domain FR741_15880 PF08240 Alcohol dehydrogenase GroES-like domain FR741_15880 PF00107 Zinc-binding dehydrogenase FR741_15885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_15885 PF03466 LysR substrate binding domain FR741_15895 PF01206 Sulfurtransferase TusA FR741_15905 PF01169 Uncharacterized protein family UPF0016 FR741_15910 PF02091 Glycyl-tRNA synthetase alpha subunit FR741_15915 PF05746 DALR anticodon binding domain FR741_15915 PF02092 Glycyl-tRNA synthetase beta subunit FR741_15920 PF00128 Alpha amylase, catalytic domain FR741_15925 PF00155 Aminotransferase class I and II FR741_15930 PF00011 Hsp20/alpha crystallin family FR741_15945 PF18053 DNA gyrase B subunit insert domain FR741_15945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_15945 PF00986 DNA gyrase B subunit, carboxyl terminus FR741_15945 PF00204 DNA gyrase B FR741_15945 PF01751 Toprim domain FR741_15950 PF02463 RecF/RecN/SMC N terminal domain FR741_15955 PF00712 DNA polymerase III beta subunit, N-terminal domain FR741_15955 PF02768 DNA polymerase III beta subunit, C-terminal domain FR741_15955 PF02767 DNA polymerase III beta subunit, central domain FR741_15965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR741_15965 PF00005 ABC transporter FR741_15970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR741_15970 PF00005 ABC transporter FR741_15980 PF00925 GTP cyclohydrolase II FR741_15980 PF08719 Domain of unknown function (DUF1768) FR741_15990 PF00072 Response regulator receiver domain FR741_15990 PF00512 His Kinase A (phospho-acceptor) domain FR741_15990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_15990 PF01627 Hpt domain FR741_15990 PF00672 HAMP domain FR741_15990 PF17149 Periplasmic sensor domain found in signal transduction proteins FR741_16000 PF01709 Transcriptional regulator FR741_16005 PF01098 Cell cycle protein FR741_16015 PF00005 ABC transporter FR741_16035 PF07694 5TMR of 5TMR-LYT FR741_16035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_16035 PF06580 Histidine kinase FR741_16035 PF13492 GAF domain FR741_16040 PF04397 LytTr DNA-binding domain FR741_16040 PF00072 Response regulator receiver domain FR741_16050 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FR741_16070 PF03616 Sodium/glutamate symporter FR741_16080 PF00005 ABC transporter FR741_16085 PF00392 Bacterial regulatory proteins, gntR family FR741_16085 PF00155 Aminotransferase class I and II FR741_16090 PF03616 Sodium/glutamate symporter FR741_16100 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FR741_16115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_16115 PF03466 LysR substrate binding domain FR741_16120 PF02678 Pirin FR741_16120 PF17954 Quercetinase C-terminal cupin domain FR741_16125 PF07681 DoxX FR741_16135 PF00730 HhH-GPD superfamily base excision DNA repair protein FR741_16135 PF06029 AlkA N-terminal domain FR741_16140 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FR741_16140 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FR741_16150 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FR741_16160 PF03600 Citrate transporter FR741_16175 PF12697 Alpha/beta hydrolase family FR741_16180 PF08329 Chitinase A, N-terminal domain FR741_16180 PF00704 Glycosyl hydrolases family 18 FR741_16190 PF06865 Pyrimidine/purine nucleoside phosphorylase FR741_16200 PF00563 EAL domain FR741_16200 PF00990 Diguanylate cyclase, GGDEF domain FR741_16200 PF03707 Bacterial signalling protein N terminal repeat FR741_16210 PF01554 MatE FR741_16215 PF00849 RNA pseudouridylate synthase FR741_16230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_16230 PF03466 LysR substrate binding domain FR741_16245 PF00990 Diguanylate cyclase, GGDEF domain FR741_16245 PF17152 Periplasmic sensor domain FR741_16255 PF00756 Putative esterase FR741_16260 PF00107 Zinc-binding dehydrogenase FR741_16260 PF08240 Alcohol dehydrogenase GroES-like domain FR741_16265 PF00797 N-acetyltransferase FR741_16270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_16270 PF03466 LysR substrate binding domain FR741_16285 PF01614 Bacterial transcriptional regulator FR741_16285 PF09339 IclR helix-turn-helix domain FR741_16295 PF10688 Bacterial inner membrane protein FR741_16300 PF07883 Cupin domain FR741_16315 PF00294 pfkB family carbohydrate kinase FR741_16320 PF01081 KDPG and KHG aldolase FR741_16335 PF13229 Right handed beta helix region FR741_16340 PF00474 Sodium:solute symporter family FR741_16345 PF14583 Oligogalacturonate lyase FR741_16350 PF04954 Siderophore-interacting protein FR741_16350 PF08021 Siderophore-interacting FAD-binding domain FR741_16355 PF00326 Prolyl oligopeptidase family FR741_16360 PF01810 LysE type translocator FR741_16365 PF01037 Lrp/AsnC ligand binding domain FR741_16370 PF18416 N-acetylglucosamine binding protein domain 2 FR741_16370 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading FR741_16385 PF13599 Pentapeptide repeats (9 copies) FR741_16390 PF03922 OmpW family FR741_16395 PF13533 Biotin-lipoyl like FR741_16400 PF07690 Major Facilitator Superfamily FR741_16410 PF12706 Beta-lactamase superfamily domain FR741_16420 PF01204 Trehalase FR741_16425 PF01661 Macro domain FR741_16430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FR741_16435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_16435 PF03466 LysR substrate binding domain FR741_16445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_16445 PF03466 LysR substrate binding domain FR741_16460 PF13419 Haloacid dehalogenase-like hydrolase FR741_16485 PF13556 PucR C-terminal helix-turn-helix domain FR741_16485 PF05651 Putative sugar diacid recognition FR741_16485 PF17853 GGDEF-like domain FR741_16490 PF02447 GntP family permease FR741_16495 PF02595 Glycerate kinase family FR741_16500 PF00155 Aminotransferase class I and II FR741_16500 PF00392 Bacterial regulatory proteins, gntR family FR741_16520 PF00583 Acetyltransferase (GNAT) family FR741_16540 PF13302 Acetyltransferase (GNAT) domain FR741_16545 PF03264 NapC/NirT cytochrome c family, N-terminal region FR741_16550 PF00384 Molybdopterin oxidoreductase FR741_16550 PF18364 Molybdopterin oxidoreductase N-terminal domain FR741_16550 PF01568 Molydopterin dinucleotide binding domain FR741_16560 PF02581 Thiamine monophosphate synthase FR741_16565 PF02110 Hydroxyethylthiazole kinase family FR741_16570 PF03070 TENA/THI-4/PQQC family FR741_16575 PF09084 NMT1/THI5 like FR741_16580 PF00528 Binding-protein-dependent transport system inner membrane component FR741_16585 PF00005 ABC transporter FR741_16590 PF08543 Phosphomethylpyrimidine kinase FR741_16595 PF01523 Putative modulator of DNA gyrase FR741_16600 PF01523 Putative modulator of DNA gyrase FR741_16605 PF04013 Putative SAM-dependent RNA methyltransferase FR741_16660 PF10928 Protein of unknown function (DUF2810) FR741_16665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FR741_16665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FR741_16675 PF03009 Glycerophosphoryl diester phosphodiesterase family FR741_16680 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FR741_16680 PF00056 lactate/malate dehydrogenase, NAD binding domain FR741_16685 PF00486 Transcriptional regulatory protein, C terminal FR741_16685 PF00072 Response regulator receiver domain FR741_16690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_16690 PF00512 His Kinase A (phospho-acceptor) domain FR741_16690 PF16750 Sensor domain of 2-component histidine kinase FR741_16690 PF00672 HAMP domain FR741_16695 PF00593 TonB dependent receptor FR741_16695 PF07715 TonB-dependent Receptor Plug Domain FR741_16705 PF01618 MotA/TolQ/ExbB proton channel family FR741_16710 PF01618 MotA/TolQ/ExbB proton channel family FR741_16715 PF02472 Biopolymer transport protein ExbD/TolR FR741_16760 PF01297 Zinc-uptake complex component A periplasmic FR741_16765 PF00005 ABC transporter FR741_16770 PF00950 ABC 3 transport family FR741_16785 PF00326 Prolyl oligopeptidase family FR741_16785 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FR741_16790 PF07690 Major Facilitator Superfamily FR741_16795 PF00491 Arginase family FR741_16800 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FR741_16800 PF17944 Arginine decarboxylase C-terminal helical extension FR741_16800 PF17810 Arginine decarboxylase helical bundle domain FR741_16805 PF00753 Metallo-beta-lactamase superfamily FR741_16810 PF18030 RimK PreATP-grasp domain FR741_16810 PF08443 RimK-like ATP-grasp domain FR741_16815 PF18030 RimK PreATP-grasp domain FR741_16815 PF08443 RimK-like ATP-grasp domain FR741_16825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_16825 PF03466 LysR substrate binding domain FR741_16850 PF00232 Glycosyl hydrolase family 1 FR741_16860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_16860 PF00512 His Kinase A (phospho-acceptor) domain FR741_16865 PF00072 Response regulator receiver domain FR741_16865 PF02954 Bacterial regulatory protein, Fis family FR741_16865 PF00158 Sigma-54 interaction domain FR741_16870 PF00990 Diguanylate cyclase, GGDEF domain FR741_16875 PF05525 Branched-chain amino acid transport protein FR741_16895 PF01266 FAD dependent oxidoreductase FR741_16910 PF02322 Cytochrome bd terminal oxidase subunit II FR741_16915 PF01654 Cytochrome bd terminal oxidase subunit I FR741_16920 PF03116 NQR2, RnfD, RnfE family FR741_16925 PF01212 Beta-eliminating lyase FR741_16945 PF07662 Na+ dependent nucleoside transporter C-terminus FR741_16945 PF01773 Na+ dependent nucleoside transporter N-terminus FR741_16945 PF07670 Nucleoside recognition FR741_16960 PF00990 Diguanylate cyclase, GGDEF domain FR741_16960 PF05230 MASE2 domain FR741_16975 PF00990 Diguanylate cyclase, GGDEF domain FR741_16980 PF00875 DNA photolyase FR741_16980 PF03441 FAD binding domain of DNA photolyase FR741_16985 PF04244 Deoxyribodipyrimidine photo-lyase-related protein FR741_17000 PF01625 Peptide methionine sulfoxide reductase FR741_17000 PF01641 SelR domain FR741_17005 PF02566 OsmC-like protein FR741_17010 PF14602 Hexapeptide repeat of succinyl-transferase FR741_17010 PF12464 Maltose acetyltransferase FR741_17045 PF03466 LysR substrate binding domain FR741_17045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_17050 PF13419 Haloacid dehalogenase-like hydrolase FR741_17065 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) FR741_17070 PF00194 Eukaryotic-type carbonic anhydrase FR741_17075 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FR741_17080 PF00657 GDSL-like Lipase/Acylhydrolase FR741_17085 PF00082 Subtilase family FR741_17085 PF05922 Peptidase inhibitor I9 FR741_17095 PF03611 PTS system sugar-specific permease component FR741_17105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FR741_17110 PF00356 Bacterial regulatory proteins, lacI family FR741_17115 PF13419 Haloacid dehalogenase-like hydrolase FR741_17125 PF00266 Aminotransferase class-V FR741_17135 PF00005 ABC transporter FR741_17140 PF00528 Binding-protein-dependent transport system inner membrane component FR741_17145 PF07702 UTRA domain FR741_17145 PF00392 Bacterial regulatory proteins, gntR family FR741_17160 PF04393 Protein of unknown function (DUF535) FR741_17170 PF01266 FAD dependent oxidoreductase FR741_17175 PF18027 Cytosolic carboxypeptidase N-terminal domain FR741_17175 PF00246 Zinc carboxypeptidase FR741_17180 PF00691 OmpA family FR741_17180 PF01389 OmpA-like transmembrane domain FR741_17185 PF03466 LysR substrate binding domain FR741_17185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_17195 PF03466 LysR substrate binding domain FR741_17195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_17205 PF00854 POT family FR741_17210 PF03313 Serine dehydratase alpha chain FR741_17210 PF03315 Serine dehydratase beta chain FR741_17230 PF08264 Anticodon-binding domain of tRNA FR741_17230 PF00133 tRNA synthetases class I (I, L, M and V) FR741_17235 PF01464 Transglycosylase SLT domain FR741_17255 PF00460 Flagella basal body rod protein FR741_17260 PF00460 Flagella basal body rod protein FR741_17260 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FR741_17265 PF13860 FlgD Ig-like domain FR741_17265 PF03963 Flagellar hook capping protein - N-terminal region FR741_17265 PF13861 FlgD Tudor-like domain FR741_17270 PF07559 Flagellar basal body protein FlaE FR741_17270 PF00460 Flagella basal body rod protein FR741_17270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FR741_17275 PF00460 Flagella basal body rod protein FR741_17275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FR741_17280 PF00460 Flagella basal body rod protein FR741_17280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FR741_17285 PF02107 Flagellar L-ring protein FR741_17290 PF02119 Flagellar P-ring protein FR741_17295 PF10135 Rod binding protein FR741_17295 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FR741_17300 PF00460 Flagella basal body rod protein FR741_17300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FR741_17305 PF00669 Bacterial flagellin N-terminal helical region FR741_17325 PF01070 FMN-dependent dehydrogenase FR741_17340 PF00581 Rhodanese-like domain FR741_17345 PF00166 Chaperonin 10 Kd subunit FR741_17350 PF00118 TCP-1/cpn60 chaperonin family FR741_17380 PF00440 Bacterial regulatory proteins, tetR family FR741_17380 PF08359 YsiA-like protein, C-terminal region FR741_17385 PF12833 Helix-turn-helix domain FR741_17390 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FR741_17395 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FR741_17400 PF13520 Amino acid permease FR741_17405 PF03060 Nitronate monooxygenase FR741_17410 PF07971 Glycosyl hydrolase family 92 FR741_17410 PF17678 Glycosyl hydrolase family 92 N-terminal domain FR741_17415 PF17678 Glycosyl hydrolase family 92 N-terminal domain FR741_17415 PF07971 Glycosyl hydrolase family 92 FR741_17425 PF07971 Glycosyl hydrolase family 92 FR741_17425 PF17678 Glycosyl hydrolase family 92 N-terminal domain FR741_17430 PF17678 Glycosyl hydrolase family 92 N-terminal domain FR741_17430 PF07971 Glycosyl hydrolase family 92 FR741_17445 PF01625 Peptide methionine sulfoxide reductase FR741_17445 PF01641 SelR domain FR741_17450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FR741_17455 PF00455 DeoR C terminal sensor domain FR741_17455 PF08220 DeoR-like helix-turn-helix domain FR741_17465 PF00857 Isochorismatase family FR741_17475 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FR741_17475 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FR741_17500 PF03466 LysR substrate binding domain FR741_17500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_17515 PF06629 MltA-interacting protein MipA FR741_17520 PF17185 NlpE C-terminal OB domain FR741_17520 PF04170 NlpE N-terminal domain FR741_17525 PF00005 ABC transporter FR741_17525 PF00571 CBS domain FR741_17530 PF00528 Binding-protein-dependent transport system inner membrane component FR741_17540 PF02001 Protein of unknown function DUF134 FR741_17565 PF03144 Elongation factor Tu domain 2 FR741_17565 PF00009 Elongation factor Tu GTP binding domain FR741_17565 PF03764 Elongation factor G, domain IV FR741_17565 PF14492 Elongation Factor G, domain II FR741_17565 PF00679 Elongation factor G C-terminus FR741_17575 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FR741_17575 PF13378 Enolase C-terminal domain-like FR741_17585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_17585 PF03466 LysR substrate binding domain FR741_17605 PF00376 MerR family regulatory protein FR741_17605 PF09278 MerR, DNA binding FR741_17630 PF13091 PLD-like domain FR741_17640 PF00873 AcrB/AcrD/AcrF family FR741_17660 PF00005 ABC transporter FR741_17660 PF08402 TOBE domain FR741_17685 PF00392 Bacterial regulatory proteins, gntR family FR741_17685 PF07702 UTRA domain FR741_17690 PF02028 BCCT, betaine/carnitine/choline family transporter FR741_17695 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 FR741_17695 PF00703 Glycosyl hydrolases family 2 FR741_17695 PF02837 Glycosyl hydrolases family 2, sugar binding domain FR741_17695 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FR741_17710 PF00873 AcrB/AcrD/AcrF family FR741_17715 PF13533 Biotin-lipoyl like FR741_17720 PF03466 LysR substrate binding domain FR741_17720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_17730 PF00579 tRNA synthetases class I (W and Y) FR741_17735 PF00196 Bacterial regulatory proteins, luxR family FR741_17735 PF00072 Response regulator receiver domain FR741_17745 PF00391 PEP-utilising enzyme, mobile domain FR741_17745 PF02896 PEP-utilising enzyme, TIM barrel domain FR741_17745 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FR741_17750 PF03618 Kinase/pyrophosphorylase FR741_17755 PF00710 Asparaginase, N-terminal FR741_17755 PF17763 Glutaminase/Asparaginase C-terminal domain FR741_17765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_17765 PF03466 LysR substrate binding domain FR741_17780 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) FR741_17790 PF02423 Ornithine cyclodeaminase/mu-crystallin family FR741_17795 PF00291 Pyridoxal-phosphate dependent enzyme FR741_17800 PF00202 Aminotransferase class-III FR741_17805 PF00171 Aldehyde dehydrogenase family FR741_17810 PF01037 Lrp/AsnC ligand binding domain FR741_17815 PF03480 Bacterial extracellular solute-binding protein, family 7 FR741_17820 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FR741_17825 PF01321 Creatinase/Prolidase N-terminal domain FR741_17825 PF00557 Metallopeptidase family M24 FR741_17830 PF00392 Bacterial regulatory proteins, gntR family FR741_17830 PF00155 Aminotransferase class I and II FR741_17835 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FR741_17840 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FR741_17860 PF08240 Alcohol dehydrogenase GroES-like domain FR741_17860 PF00107 Zinc-binding dehydrogenase FR741_17865 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FR741_17875 PF03466 LysR substrate binding domain FR741_17875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_17880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_17880 PF03466 LysR substrate binding domain FR741_17890 PF00270 DEAD/DEAH box helicase FR741_17890 PF00271 Helicase conserved C-terminal domain FR741_17900 PF00535 Glycosyl transferase family 2 FR741_17930 PF00155 Aminotransferase class I and II FR741_17935 PF12833 Helix-turn-helix domain FR741_17935 PF01497 Periplasmic binding protein FR741_17990 PF11471 Maltoporin periplasmic N-terminal extension FR741_17990 PF02264 LamB porin FR741_17995 PF00356 Bacterial regulatory proteins, lacI family FR741_18000 PF00367 phosphotransferase system, EIIB FR741_18000 PF02378 Phosphotransferase system, EIIC FR741_18005 PF00294 pfkB family carbohydrate kinase FR741_18010 PF00251 Glycosyl hydrolases family 32 N-terminal domain FR741_18010 PF08244 Glycosyl hydrolases family 32 C terminal FR741_18020 PF02798 Glutathione S-transferase, N-terminal domain FR741_18030 PF00768 D-alanyl-D-alanine carboxypeptidase FR741_18030 PF07943 Penicillin-binding protein 5, C-terminal domain FR741_18040 PF08534 Redoxin FR741_18040 PF00462 Glutaredoxin FR741_18045 PF00962 Adenosine/AMP deaminase FR741_18060 PF00313 'Cold-shock' DNA-binding domain FR741_18065 PF05726 Pirin C-terminal cupin domain FR741_18065 PF02678 Pirin FR741_18070 PF01734 Patatin-like phospholipase FR741_18085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FR741_18090 PF00884 Sulfatase FR741_18090 PF08019 Phosphoethanolamine transferase EptA/EptB FR741_18095 PF01219 Prokaryotic diacylglycerol kinase FR741_18105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_18105 PF00672 HAMP domain FR741_18105 PF16527 Two-component sensor protein CpxA, periplasmic domain FR741_18105 PF00512 His Kinase A (phospho-acceptor) domain FR741_18110 PF00072 Response regulator receiver domain FR741_18110 PF00486 Transcriptional regulatory protein, C terminal FR741_18125 PF01323 DSBA-like thioredoxin domain FR741_18140 PF00255 Glutathione peroxidase FR741_18145 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FR741_18155 PF07690 Major Facilitator Superfamily FR741_18170 PF01966 HD domain FR741_18175 PF07969 Amidohydrolase family FR741_18180 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FR741_18185 PF03448 MgtE intracellular N domain FR741_18185 PF01769 Divalent cation transporter FR741_18185 PF00571 CBS domain FR741_18190 PF03109 ABC1 family FR741_18195 PF00529 HlyD membrane-fusion protein of T1SS FR741_18195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR741_18220 PF00486 Transcriptional regulatory protein, C terminal FR741_18220 PF00072 Response regulator receiver domain FR741_18225 PF16527 Two-component sensor protein CpxA, periplasmic domain FR741_18225 PF00672 HAMP domain FR741_18225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_18225 PF00512 His Kinase A (phospho-acceptor) domain FR741_18235 PF00155 Aminotransferase class I and II FR741_18235 PF00392 Bacterial regulatory proteins, gntR family FR741_18240 PF13520 Amino acid permease FR741_18255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_18255 PF03466 LysR substrate binding domain FR741_18270 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FR741_18270 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FR741_18275 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FR741_18275 PF01627 Hpt domain FR741_18275 PF00672 HAMP domain FR741_18275 PF00512 His Kinase A (phospho-acceptor) domain FR741_18275 PF00072 Response regulator receiver domain FR741_18275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_18280 PF01554 MatE FR741_18285 PF04363 Protein of unknown function (DUF496) FR741_18295 PF04337 Protein of unknown function, DUF480 FR741_18300 PF01541 GIY-YIG catalytic domain FR741_18310 PF13407 Periplasmic binding protein domain FR741_18315 PF00512 His Kinase A (phospho-acceptor) domain FR741_18315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_18315 PF09308 LuxQ, periplasmic FR741_18315 PF00072 Response regulator receiver domain FR741_18325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR741_18325 PF00529 HlyD membrane-fusion protein of T1SS FR741_18345 PF01037 Lrp/AsnC ligand binding domain FR741_18375 PF07549 SecD/SecF GG Motif FR741_18375 PF13721 SecD export protein N-terminal TM region FR741_18375 PF02355 Protein export membrane protein FR741_18380 PF02355 Protein export membrane protein FR741_18380 PF07549 SecD/SecF GG Motif FR741_18390 PF01810 LysE type translocator FR741_18400 PF00106 short chain dehydrogenase FR741_18405 PF02803 Thiolase, C-terminal domain FR741_18405 PF00108 Thiolase, N-terminal domain FR741_18415 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FR741_18425 PF03264 NapC/NirT cytochrome c family, N-terminal region FR741_18430 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FR741_18435 PF00384 Molybdopterin oxidoreductase FR741_18435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FR741_18435 PF01568 Molydopterin dinucleotide binding domain FR741_18445 PF13187 4Fe-4S dicluster domain FR741_18445 PF12838 4Fe-4S dicluster domain FR741_18450 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FR741_18450 PF07730 Histidine kinase FR741_18450 PF00672 HAMP domain FR741_18450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_18455 PF00196 Bacterial regulatory proteins, luxR family FR741_18455 PF00072 Response regulator receiver domain FR741_18470 PF01546 Peptidase family M20/M25/M40 FR741_18470 PF07687 Peptidase dimerisation domain FR741_18475 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FR741_18480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR741_18485 PF00873 AcrB/AcrD/AcrF family FR741_18490 PF17200 Single Cache domain 2 FR741_18490 PF00672 HAMP domain FR741_18490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FR741_18495 PF00472 RF-1 domain FR741_18500 PF13419 Haloacid dehalogenase-like hydrolase FR741_18505 PF00691 OmpA family FR741_18505 PF01389 OmpA-like transmembrane domain FR741_18515 PF00793 DAHP synthetase I family FR741_18520 PF07690 Major Facilitator Superfamily FR741_18525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FR741_18525 PF08447 PAS fold FR741_18530 PF02779 Transketolase, pyrimidine binding domain FR741_18530 PF00456 Transketolase, thiamine diphosphate binding domain FR741_18530 PF02780 Transketolase, C-terminal domain FR741_18535 PF00923 Transaldolase/Fructose-6-phosphate aldolase FR741_18555 PF08329 Chitinase A, N-terminal domain FR741_18555 PF00704 Glycosyl hydrolases family 18 FR741_18560 PF00563 EAL domain FR741_18560 PF00990 Diguanylate cyclase, GGDEF domain FR741_18560 PF03707 Bacterial signalling protein N terminal repeat FR741_18565 PF00581 Rhodanese-like domain FR741_18585 PF00899 ThiF family FR741_18590 PF03454 MoeA C-terminal region (domain IV) FR741_18590 PF00994 Probable molybdopterin binding domain FR741_18590 PF03453 MoeA N-terminal region (domain I and II) FR741_18595 PF01227 GTP cyclohydrolase I FR741_18600 PF01566 Natural resistance-associated macrophage protein FR741_18610 PF00654 Voltage gated chloride channel FR741_18625 PF00248 Aldo/keto reductase family FR741_18630 PF00072 Response regulator receiver domain FR741_18640 PF03853 YjeF-related protein N-terminus FR741_18640 PF01256 Carbohydrate kinase FR741_18645 PF00478 IMP dehydrogenase / GMP reductase domain FR741_18660 PF08031 Berberine and berberine like FR741_18660 PF01565 FAD binding domain FR741_18690 PF00392 Bacterial regulatory proteins, gntR family FR741_18695 PF00144 Beta-lactamase FR741_18700 PF00132 Bacterial transferase hexapeptide (six repeats) FR741_18705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FR741_18710 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FR741_18710 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FR741_18710 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FR741_18715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_18715 PF03466 LysR substrate binding domain FR741_18720 PF08525 Opacity-associated protein A N-terminal motif FR741_18720 PF01551 Peptidase family M23 FR741_18720 PF01476 LysM domain FR741_18745 PF02954 Bacterial regulatory protein, Fis family FR741_18745 PF00072 Response regulator receiver domain FR741_18745 PF00158 Sigma-54 interaction domain FR741_18750 PF07724 AAA domain (Cdc48 subfamily) FR741_18750 PF00004 ATPase family associated with various cellular activities (AAA) FR741_18750 PF17871 AAA lid domain FR741_18750 PF10431 C-terminal, D2-small domain, of ClpB protein FR741_18755 PF05638 Type VI secretion system effector, Hcp FR741_18760 PF04717 Type VI secretion system, phage-baseplate injector FR741_18785 PF00069 Protein kinase domain FR741_18820 PF01037 Lrp/AsnC ligand binding domain FR741_18865 PF00182 Chitinase class I FR741_18885 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FR741_18890 PF07690 Major Facilitator Superfamily FR741_18900 PF03466 LysR substrate binding domain FR741_18900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_18905 PF00106 short chain dehydrogenase FR741_18910 PF00582 Universal stress protein family FR741_18920 PF13244 Domain of unknown function (DUF4040) FR741_18920 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FR741_18920 PF00361 Proton-conducting membrane transporter FR741_18920 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FR741_18940 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FR741_18945 PF03334 Na+/H+ antiporter subunit FR741_18950 PF13193 AMP-binding enzyme C-terminal domain FR741_18950 PF00501 AMP-binding enzyme FR741_18955 PF00766 Electron transfer flavoprotein FAD-binding domain FR741_18955 PF01012 Electron transfer flavoprotein domain FR741_18960 PF01012 Electron transfer flavoprotein domain FR741_18975 PF00005 ABC transporter FR741_18975 PF12399 Branched-chain amino acid ATP-binding cassette transporter FR741_19000 PF00005 ABC transporter FR741_19005 PF00501 AMP-binding enzyme FR741_19005 PF14535 AMP-binding enzyme C-terminal domain FR741_19015 PF02028 BCCT, betaine/carnitine/choline family transporter FR741_19025 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FR741_19025 PF00205 Thiamine pyrophosphate enzyme, central domain FR741_19025 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FR741_19030 PF03306 Alpha-acetolactate decarboxylase FR741_19035 PF03466 LysR substrate binding domain FR741_19035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_19040 PF13419 Haloacid dehalogenase-like hydrolase FR741_19055 PF02322 Cytochrome bd terminal oxidase subunit II FR741_19060 PF01654 Cytochrome bd terminal oxidase subunit I FR741_19065 PF00155 Aminotransferase class I and II FR741_19065 PF00392 Bacterial regulatory proteins, gntR family FR741_19070 PF12464 Maltose acetyltransferase FR741_19070 PF14602 Hexapeptide repeat of succinyl-transferase FR741_19085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_19085 PF00672 HAMP domain FR741_19085 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FR741_19085 PF01627 Hpt domain FR741_19085 PF00512 His Kinase A (phospho-acceptor) domain FR741_19085 PF00072 Response regulator receiver domain FR741_19090 PF00682 HMGL-like FR741_19095 PF00289 Biotin carboxylase, N-terminal domain FR741_19095 PF00364 Biotin-requiring enzyme FR741_19095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FR741_19095 PF18140 Propionyl-coenzyme A carboxylase BT domain FR741_19095 PF02785 Biotin carboxylase C-terminal domain FR741_19100 PF00378 Enoyl-CoA hydratase/isomerase FR741_19105 PF01039 Carboxyl transferase domain FR741_19110 PF02770 Acyl-CoA dehydrogenase, middle domain FR741_19110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FR741_19110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FR741_19115 PF00376 MerR family regulatory protein FR741_19115 PF09278 MerR, DNA binding FR741_19120 PF02803 Thiolase, C-terminal domain FR741_19120 PF00108 Thiolase, N-terminal domain FR741_19125 PF00171 Aldehyde dehydrogenase family FR741_19130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FR741_19130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FR741_19130 PF02770 Acyl-CoA dehydrogenase, middle domain FR741_19135 PF00378 Enoyl-CoA hydratase/isomerase FR741_19145 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FR741_19145 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FR741_19155 PF00990 Diguanylate cyclase, GGDEF domain FR741_19155 PF00072 Response regulator receiver domain FR741_19160 PF13977 BetI-type transcriptional repressor, C-terminal FR741_19160 PF00440 Bacterial regulatory proteins, tetR family FR741_19165 PF00171 Aldehyde dehydrogenase family FR741_19170 PF05199 GMC oxidoreductase FR741_19170 PF00732 GMC oxidoreductase FR741_19175 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FR741_19180 PF00528 Binding-protein-dependent transport system inner membrane component FR741_19185 PF00571 CBS domain FR741_19185 PF00005 ABC transporter FR741_19190 PF00881 Nitroreductase family FR741_19200 PF01145 SPFH domain / Band 7 family FR741_19200 PF16200 C-terminal region of band_7 FR741_19210 PF13188 PAS domain FR741_19210 PF00563 EAL domain FR741_19210 PF00990 Diguanylate cyclase, GGDEF domain FR741_19210 PF03707 Bacterial signalling protein N terminal repeat FR741_19215 PF00034 Cytochrome c FR741_19215 PF03150 Di-haem cytochrome c peroxidase FR741_19220 PF00512 His Kinase A (phospho-acceptor) domain FR741_19220 PF09308 LuxQ, periplasmic FR741_19220 PF00072 Response regulator receiver domain FR741_19220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_19230 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FR741_19230 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FR741_19240 PF04116 Fatty acid hydroxylase superfamily FR741_19280 PF00990 Diguanylate cyclase, GGDEF domain FR741_19280 PF00563 EAL domain FR741_19285 PF05025 RbsD / FucU transport protein family FR741_19290 PF00005 ABC transporter FR741_19295 PF02653 Branched-chain amino acid transport system / permease component FR741_19300 PF13407 Periplasmic binding protein domain FR741_19305 PF00294 pfkB family carbohydrate kinase FR741_19310 PF00356 Bacterial regulatory proteins, lacI family FR741_19320 PF04973 Nicotinamide mononucleotide transporter FR741_19325 PF01048 Phosphorylase superfamily FR741_19335 PF01497 Periplasmic binding protein FR741_19340 PF01032 FecCD transport family FR741_19345 PF01032 FecCD transport family FR741_19350 PF00005 ABC transporter FR741_19355 PF13411 MerR HTH family regulatory protein FR741_19360 PF12833 Helix-turn-helix domain FR741_19365 PF07715 TonB-dependent Receptor Plug Domain FR741_19365 PF00593 TonB dependent receptor FR741_19395 PF12805 FUSC-like inner membrane protein yccS FR741_19400 PF00580 UvrD/REP helicase N-terminal domain FR741_19400 PF13361 UvrD-like helicase C-terminal domain FR741_19400 PF12462 DNA helicase IV / RNA helicase N terminal FR741_19405 PF02142 MGS-like domain FR741_19410 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FR741_19415 PF01627 Hpt domain FR741_19415 PF00072 Response regulator receiver domain FR741_19415 PF00672 HAMP domain FR741_19415 PF00512 His Kinase A (phospho-acceptor) domain FR741_19415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_19430 PF00486 Transcriptional regulatory protein, C terminal FR741_19430 PF00072 Response regulator receiver domain FR741_19435 PF00884 Sulfatase FR741_19440 PF03466 LysR substrate binding domain FR741_19440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_19445 PF16385 Domain of unknown function FR741_19445 PF00884 Sulfatase FR741_19450 PF13186 Iron-sulfur cluster-binding domain FR741_19450 PF04055 Radical SAM superfamily FR741_19455 PF07726 ATPase family associated with various cellular activities (AAA) FR741_19455 PF17863 AAA lid domain FR741_19470 PF00092 von Willebrand factor type A domain FR741_19485 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FR741_19485 PF01872 RibD C-terminal domain FR741_19490 PF03466 LysR substrate binding domain FR741_19490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_19495 PF00781 Diacylglycerol kinase catalytic domain FR741_19500 PF04076 Bacterial OB fold (BOF) protein FR741_19510 PF18081 Fanconi anemia-associated nuclease SAP domain FR741_19510 PF08774 VRR-NUC domain FR741_19515 PF07690 Major Facilitator Superfamily FR741_19525 PF01435 Peptidase family M48 FR741_19530 PF04011 LemA family FR741_19535 PF03606 C4-dicarboxylate anaerobic carrier FR741_19545 PF00583 Acetyltransferase (GNAT) family FR741_19545 PF00814 Glycoprotease family FR741_19555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_19555 PF00072 Response regulator receiver domain FR741_19560 PF00155 Aminotransferase class I and II FR741_19565 PF01926 50S ribosome-binding GTPase FR741_19570 PF03707 Bacterial signalling protein N terminal repeat FR741_19570 PF00990 Diguanylate cyclase, GGDEF domain FR741_19570 PF00563 EAL domain FR741_19575 PF00990 Diguanylate cyclase, GGDEF domain FR741_19575 PF08448 PAS fold FR741_19585 PF00196 Bacterial regulatory proteins, luxR family FR741_19585 PF00072 Response regulator receiver domain FR741_19590 PF00072 Response regulator receiver domain FR741_19590 PF01584 CheW-like domain FR741_19595 PF08334 Type II secretion system (T2SS), protein G FR741_19595 PF07963 Prokaryotic N-terminal methylation motif FR741_19605 PF00892 EamA-like transporter family FR741_19630 PF01447 Thermolysin metallopeptidase, catalytic domain FR741_19630 PF04151 Bacterial pre-peptidase C-terminal domain FR741_19630 PF02868 Thermolysin metallopeptidase, alpha-helical domain FR741_19630 PF03413 Peptidase propeptide and YPEB domain FR741_19630 PF07504 Fungalysin/Thermolysin Propeptide Motif FR741_19635 PF00893 Small Multidrug Resistance protein FR741_19640 PF00892 EamA-like transporter family FR741_19655 PF00171 Aldehyde dehydrogenase family FR741_19665 PF01645 Conserved region in glutamate synthase FR741_19665 PF13187 4Fe-4S dicluster domain FR741_19670 PF00141 Peroxidase FR741_19675 PF09722 Protein of unknown function (DUF2384) FR741_19685 PF01757 Acyltransferase family FR741_19695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FR741_19700 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FR741_19720 PF00571 CBS domain FR741_19720 PF03448 MgtE intracellular N domain FR741_19720 PF01769 Divalent cation transporter FR741_19750 PF01327 Polypeptide deformylase FR741_19755 PF00376 MerR family regulatory protein FR741_19755 PF09278 MerR, DNA binding FR741_19765 PF02253 Phospholipase A1 FR741_19785 PF00005 ABC transporter FR741_19785 PF00664 ABC transporter transmembrane region FR741_19790 PF07733 Bacterial DNA polymerase III alpha NTPase domain FR741_19790 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FR741_19790 PF11490 DNA polymerase III polC-type N-terminus II FR741_19790 PF00929 Exonuclease FR741_19790 PF02811 PHP domain FR741_19790 PF14579 Helix-hairpin-helix motif FR741_19810 PF12833 Helix-turn-helix domain FR741_19815 PF02627 Carboxymuconolactone decarboxylase family FR741_19825 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FR741_19830 PF02347 Glycine cleavage system P-protein FR741_19835 PF01597 Glycine cleavage H-protein FR741_19840 PF00464 Serine hydroxymethyltransferase FR741_19850 PF08669 Glycine cleavage T-protein C-terminal barrel domain FR741_19850 PF01571 Aminomethyltransferase folate-binding domain FR741_19860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR741_19870 PF00873 AcrB/AcrD/AcrF family FR741_19880 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FR741_19880 PF02378 Phosphotransferase system, EIIC FR741_19885 PF00294 pfkB family carbohydrate kinase FR741_19890 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FR741_19890 PF00381 PTS HPr component phosphorylation site FR741_19895 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FR741_19895 PF00356 Bacterial regulatory proteins, lacI family FR741_19910 PF00990 Diguanylate cyclase, GGDEF domain FR741_19910 PF00989 PAS fold FR741_19910 PF00563 EAL domain FR741_19910 PF01590 GAF domain FR741_19915 PF00528 Binding-protein-dependent transport system inner membrane component FR741_19920 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR741_19925 PF00528 Binding-protein-dependent transport system inner membrane component FR741_19930 PF00005 ABC transporter FR741_19940 PF00465 Iron-containing alcohol dehydrogenase FR741_19945 PF12833 Helix-turn-helix domain FR741_19945 PF06719 AraC-type transcriptional regulator N-terminus FR741_19955 PF06483 Chitinase C FR741_19955 PF00704 Glycosyl hydrolases family 18 FR741_19960 PF00483 Nucleotidyl transferase FR741_19965 PF01268 Formate--tetrahydrofolate ligase FR741_19970 PF00294 pfkB family carbohydrate kinase FR741_19985 PF13419 Haloacid dehalogenase-like hydrolase FR741_19995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FR741_19995 PF00672 HAMP domain FR741_19995 PF12729 Four helix bundle sensory module for signal transduction FR741_20005 PF04336 Acyl carrier protein phosphodiesterase FR741_20010 PF00270 DEAD/DEAH box helicase FR741_20010 PF00271 Helicase conserved C-terminal domain FR741_20015 PF12792 CSS motif domain associated with EAL FR741_20015 PF00563 EAL domain FR741_20030 PF01292 Prokaryotic cytochrome b561 FR741_20035 PF04264 YceI-like domain FR741_20040 PF01226 Formate/nitrite transporter FR741_20050 PF03466 LysR substrate binding domain FR741_20050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_20055 PF06496 Protein of unknown function (DUF1097) FR741_20060 PF11398 Protein of unknown function (DUF2813) FR741_20065 PF02872 5'-nucleotidase, C-terminal domain FR741_20065 PF00149 Calcineurin-like phosphoesterase FR741_20070 PF03741 Integral membrane protein TerC family FR741_20090 PF12262 Bacterial virulence factor lipase N-terminal FR741_20095 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FR741_20110 PF03061 Thioesterase superfamily FR741_20120 PF12793 Sugar transport-related sRNA regulator N-term FR741_20120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR741_20145 PF00684 DnaJ central domain FR741_20145 PF01556 DnaJ C terminal domain FR741_20145 PF00226 DnaJ domain FR741_20155 PF00563 EAL domain FR741_20155 PF00990 Diguanylate cyclase, GGDEF domain FR741_20155 PF00498 FHA domain FR741_20160 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FR741_20160 PF12241 Trans-2-enoyl-CoA reductase catalytic region FR741_20160 PF07055 Enoyl reductase FAD binding domain FR741_20165 PF13472 GDSL-like Lipase/Acylhydrolase family FR741_20170 PF00005 ABC transporter FR741_20185 PF02626 Carboxyltransferase domain, subdomain A and B FR741_20190 PF02682 Carboxyltransferase domain, subdomain C and D FR741_20195 PF03746 LamB/YcsF family FR741_20200 PF00990 Diguanylate cyclase, GGDEF domain FR741_20200 PF13426 PAS domain FR741_20200 PF08448 PAS fold FR741_20200 PF05231 MASE1 FR741_20200 PF00563 EAL domain FR741_20200 PF08447 PAS fold FR741_20205 PF16363 GDP-mannose 4,6 dehydratase FR741_20215 PF00593 TonB dependent receptor FR741_20215 PF07715 TonB-dependent Receptor Plug Domain FR741_20220 PF03466 LysR substrate binding domain FR741_20220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_20225 PF13607 Succinyl-CoA ligase like flavodoxin domain FR741_20225 PF13380 CoA binding domain FR741_20225 PF00583 Acetyltransferase (GNAT) family FR741_20230 PF05036 Sporulation related domain FR741_20235 PF01820 D-ala D-ala ligase N-terminus FR741_20235 PF07478 D-ala D-ala ligase C-terminus FR741_20245 PF01253 Translation initiation factor SUI1 FR741_20350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_20350 PF03466 LysR substrate binding domain FR741_20360 PF00582 Universal stress protein family FR741_20365 PF03701 Uncharacterised protein family (UPF0181) FR741_20380 PF00072 Response regulator receiver domain FR741_20380 PF00486 Transcriptional regulatory protein, C terminal FR741_20390 PF02233 NAD(P) transhydrogenase beta subunit FR741_20395 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FR741_20395 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FR741_20395 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FR741_20410 PF00072 Response regulator receiver domain FR741_20410 PF00990 Diguanylate cyclase, GGDEF domain FR741_20420 PF00360 Phytochrome region FR741_20420 PF00990 Diguanylate cyclase, GGDEF domain FR741_20420 PF01590 GAF domain FR741_20420 PF00563 EAL domain FR741_20430 PF00005 ABC transporter FR741_20430 PF03459 TOBE domain FR741_20435 PF00528 Binding-protein-dependent transport system inner membrane component FR741_20445 PF07685 CobB/CobQ-like glutamine amidotransferase domain FR741_20445 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FR741_20460 PF18030 RimK PreATP-grasp domain FR741_20460 PF08443 RimK-like ATP-grasp domain FR741_20465 PF00155 Aminotransferase class I and II FR741_20470 PF12833 Helix-turn-helix domain FR741_20470 PF12852 Cupin FR741_20475 PF01554 MatE FR741_20485 PF03477 ATP cone domain FR741_20485 PF13597 Anaerobic ribonucleoside-triphosphate reductase FR741_20495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR741_20500 PF00873 AcrB/AcrD/AcrF family FR741_20510 PF04143 Sulphur transport FR741_20525 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FR741_20525 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR741_20530 PF01177 Asp/Glu/Hydantoin racemase FR741_20535 PF02567 Phenazine biosynthesis-like protein FR741_20545 PF00384 Molybdopterin oxidoreductase FR741_20555 PF03466 LysR substrate binding domain FR741_20555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_20560 PF02634 FdhD/NarQ family FR741_20565 PF07690 Major Facilitator Superfamily FR741_20570 PF00072 Response regulator receiver domain FR741_20570 PF00196 Bacterial regulatory proteins, luxR family FR741_20575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_20575 PF05231 MASE1 FR741_20575 PF07730 Histidine kinase FR741_20580 PF07690 Major Facilitator Superfamily FR741_20585 PF01238 Phosphomannose isomerase type I FR741_20605 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FR741_20605 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FR741_20610 PF00085 Thioredoxin FR741_20615 PF07690 Major Facilitator Superfamily FR741_20620 PF11756 Nitrous oxide-stimulated promoter FR741_20635 PF00593 TonB dependent receptor FR741_20635 PF07715 TonB-dependent Receptor Plug Domain FR741_20645 PF03605 Anaerobic c4-dicarboxylate membrane transporter FR741_20660 PF10414 Sirohaem synthase dimerisation region FR741_20660 PF14824 Sirohaem biosynthesis protein central FR741_20660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FR741_20665 PF01226 Formate/nitrite transporter FR741_20670 PF13806 Rieske-like [2Fe-2S] domain FR741_20675 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR741_20675 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FR741_20675 PF18267 Rubredoxin NAD+ reductase C-terminal domain FR741_20675 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FR741_20675 PF04324 BFD-like [2Fe-2S] binding domain FR741_20680 PF01272 Transcription elongation factor, GreA/GreB, C-term FR741_20680 PF14760 Rnk N-terminus FR741_20690 PF00563 EAL domain FR741_20690 PF00990 Diguanylate cyclase, GGDEF domain FR741_20690 PF13426 PAS domain FR741_20745 PF00128 Alpha amylase, catalytic domain FR741_20745 PF09154 Domain of unknown function (DUF1939) FR741_20765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FR741_20765 PF00672 HAMP domain FR741_20770 PF01168 Alanine racemase, N-terminal domain FR741_20770 PF00842 Alanine racemase, C-terminal domain FR741_20785 PF03466 LysR substrate binding domain FR741_20785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_20790 PF14031 Putative serine dehydratase domain FR741_20790 PF01168 Alanine racemase, N-terminal domain FR741_20795 PF02423 Ornithine cyclodeaminase/mu-crystallin family FR741_20805 PF01565 FAD binding domain FR741_20805 PF09330 D-lactate dehydrogenase, membrane binding FR741_20810 PF03466 LysR substrate binding domain FR741_20810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_20825 PF05762 VWA domain containing CoxE-like protein FR741_20830 PF17868 AAA lid domain FR741_20830 PF07728 AAA domain (dynein-related subfamily) FR741_20830 PF12592 Protein of unknown function (DUF3763) FR741_20840 PF01212 Beta-eliminating lyase FR741_20845 PF00034 Cytochrome c FR741_20850 PF03606 C4-dicarboxylate anaerobic carrier FR741_20860 PF08212 Lipocalin-like domain FR741_20870 PF13476 AAA domain FR741_20875 PF00149 Calcineurin-like phosphoesterase FR741_20875 PF12320 Type 5 capsule protein repressor C-terminal domain FR741_20890 PF16671 Actin cross-linking domain FR741_20890 PF04717 Type VI secretion system, phage-baseplate injector FR741_20900 PF10431 C-terminal, D2-small domain, of ClpB protein FR741_20900 PF00004 ATPase family associated with various cellular activities (AAA) FR741_20900 PF07724 AAA domain (Cdc48 subfamily) FR741_20900 PF17871 AAA lid domain FR741_20960 PF00691 OmpA family FR741_20960 PF13677 Membrane MotB of proton-channel complex MotA/MotB FR741_20980 PF00069 Protein kinase domain FR741_20980 PF03793 PASTA domain FR741_21000 PF00072 Response regulator receiver domain FR741_21000 PF00211 Adenylate and Guanylate cyclase catalytic domain FR741_21010 PF00043 Glutathione S-transferase, C-terminal domain FR741_21010 PF13417 Glutathione S-transferase, N-terminal domain FR741_21015 PF08361 MAATS-type transcriptional repressor, C-terminal region FR741_21015 PF00440 Bacterial regulatory proteins, tetR family FR741_21030 PF18267 Rubredoxin NAD+ reductase C-terminal domain FR741_21030 PF04324 BFD-like [2Fe-2S] binding domain FR741_21030 PF13806 Rieske-like [2Fe-2S] domain FR741_21030 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FR741_21030 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FR741_21030 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR741_21035 PF00005 ABC transporter FR741_21040 PF00528 Binding-protein-dependent transport system inner membrane component FR741_21045 PF00005 ABC transporter FR741_21055 PF00072 Response regulator receiver domain FR741_21055 PF03861 ANTAR domain FR741_21060 PF01738 Dienelactone hydrolase family FR741_21065 PF02885 Glycosyl transferase family, helical bundle domain FR741_21065 PF00591 Glycosyl transferase family, a/b domain FR741_21070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FR741_21070 PF10414 Sirohaem synthase dimerisation region FR741_21070 PF14824 Sirohaem biosynthesis protein central FR741_21075 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FR741_21075 PF00384 Molybdopterin oxidoreductase FR741_21075 PF01568 Molydopterin dinucleotide binding domain FR741_21085 PF03222 Tryptophan/tyrosine permease family FR741_21095 PF07694 5TMR of 5TMR-LYT FR741_21095 PF00990 Diguanylate cyclase, GGDEF domain FR741_21105 PF00082 Subtilase family FR741_21105 PF01483 Proprotein convertase P-domain FR741_21125 PF00072 Response regulator receiver domain FR741_21125 PF00486 Transcriptional regulatory protein, C terminal FR741_21145 PF04314 Copper chaperone PCu(A)C FR741_21150 PF00012 Hsp70 protein FR741_21165 PF00676 Dehydrogenase E1 component FR741_21170 PF02780 Transketolase, C-terminal domain FR741_21170 PF02779 Transketolase, pyrimidine binding domain FR741_21175 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FR741_21175 PF02817 e3 binding domain FR741_21175 PF00364 Biotin-requiring enzyme FR741_21180 PF00766 Electron transfer flavoprotein FAD-binding domain FR741_21180 PF01012 Electron transfer flavoprotein domain FR741_21200 PF00691 OmpA family FR741_21200 PF01389 OmpA-like transmembrane domain FR741_21215 PF04444 Catechol dioxygenase N terminus FR741_21215 PF00775 Dioxygenase FR741_21220 PF00528 Binding-protein-dependent transport system inner membrane component FR741_21225 PF00528 Binding-protein-dependent transport system inner membrane component FR741_21230 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR741_21235 PF00005 ABC transporter FR741_21265 PF02028 BCCT, betaine/carnitine/choline family transporter FR741_21275 PF00171 Aldehyde dehydrogenase family FR741_21290 PF01565 FAD binding domain FR741_21290 PF08031 Berberine and berberine like FR741_21295 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FR741_21295 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR741_21300 PF01040 UbiA prenyltransferase family FR741_21310 PF00510 Cytochrome c oxidase subunit III FR741_21315 PF00115 Cytochrome C and Quinol oxidase polypeptide I FR741_21320 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FR741_21320 PF06481 COX Aromatic Rich Motif FR741_21330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FR741_21330 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FR741_21335 PF00378 Enoyl-CoA hydratase/isomerase FR741_21340 PF00378 Enoyl-CoA hydratase/isomerase FR741_21345 PF02770 Acyl-CoA dehydrogenase, middle domain FR741_21345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FR741_21345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FR741_21350 PF00171 Aldehyde dehydrogenase family FR741_21355 PF00108 Thiolase, N-terminal domain FR741_21355 PF02803 Thiolase, C-terminal domain FR741_21360 PF09278 MerR, DNA binding FR741_21360 PF00376 MerR family regulatory protein FR741_21365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FR741_21365 PF02770 Acyl-CoA dehydrogenase, middle domain FR741_21365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FR741_21370 PF01039 Carboxyl transferase domain FR741_21375 PF00378 Enoyl-CoA hydratase/isomerase FR741_21380 PF00682 HMGL-like FR741_21385 PF10063 Uncharacterized integral membrane protein (DUF2301) FR741_21400 PF04909 Amidohydrolase FR741_21405 PF00561 alpha/beta hydrolase fold FR741_21410 PF01965 DJ-1/PfpI family FR741_21410 PF12833 Helix-turn-helix domain FR741_21425 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FR741_21430 PF00528 Binding-protein-dependent transport system inner membrane component FR741_21435 PF00571 CBS domain FR741_21435 PF00005 ABC transporter FR741_21440 PF00528 Binding-protein-dependent transport system inner membrane component FR741_21445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FR741_21445 PF08447 PAS fold FR741_21445 PF13426 PAS domain FR741_21450 PF00871 Acetokinase family FR741_21460 PF00563 EAL domain FR741_21460 PF03707 Bacterial signalling protein N terminal repeat FR741_21460 PF00990 Diguanylate cyclase, GGDEF domain FR741_21465 PF03880 DbpA RNA binding domain FR741_21465 PF00270 DEAD/DEAH box helicase FR741_21465 PF00271 Helicase conserved C-terminal domain FR741_21470 PF08206 Ribonuclease B OB domain FR741_21470 PF00773 RNB domain FR741_21470 PF00575 S1 RNA binding domain FR741_21475 PF12833 Helix-turn-helix domain FR741_21485 PF12849 PBP superfamily domain FR741_21490 PF01575 MaoC like domain FR741_21500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FR741_21500 PF08447 PAS fold FR741_21505 PF00005 ABC transporter FR741_21510 PF12792 CSS motif domain associated with EAL FR741_21510 PF00563 EAL domain FR741_21530 PF00270 DEAD/DEAH box helicase FR741_21530 PF00271 Helicase conserved C-terminal domain FR741_21535 PF02492 CobW/HypB/UreG, nucleotide-binding domain FR741_21535 PF07683 Cobalamin synthesis protein cobW C-terminal domain FR741_21545 PF01470 Pyroglutamyl peptidase FR741_21555 PF00313 'Cold-shock' DNA-binding domain FR741_21560 PF17876 Cold shock domain FR741_21560 PF00575 S1 RNA binding domain FR741_21560 PF00773 RNB domain FR741_21560 PF08206 Ribonuclease B OB domain FR741_21560 PF08461 Ribonuclease R winged-helix domain FR741_21565 PF00291 Pyridoxal-phosphate dependent enzyme FR741_21575 PF09905 DNA-binding protein VF530 FR741_21580 PF00270 DEAD/DEAH box helicase FR741_21580 PF00271 Helicase conserved C-terminal domain FR741_21585 PF07690 Major Facilitator Superfamily FR741_21590 PF03466 LysR substrate binding domain FR741_21590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_21600 PF01925 Sulfite exporter TauE/SafE FR741_21650 PF04151 Bacterial pre-peptidase C-terminal domain FR741_21650 PF05922 Peptidase inhibitor I9 FR741_21650 PF00082 Subtilase family FR741_21670 PF12843 Putative quorum-sensing-regulated virulence factor FR741_21690 PF01329 Pterin 4 alpha carbinolamine dehydratase FR741_21695 PF00351 Biopterin-dependent aromatic amino acid hydroxylase FR741_21700 PF13193 AMP-binding enzyme C-terminal domain FR741_21700 PF00501 AMP-binding enzyme FR741_21710 PF03466 LysR substrate binding domain FR741_21710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_21720 PF00892 EamA-like transporter family FR741_21735 PF00465 Iron-containing alcohol dehydrogenase FR741_21740 PF07995 Glucose / Sorbosone dehydrogenase FR741_21750 PF00210 Ferritin-like domain FR741_21755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FR741_21755 PF00672 HAMP domain FR741_21755 PF17200 Single Cache domain 2 FR741_21765 PF00005 ABC transporter FR741_21765 PF02687 FtsX-like permease family FR741_21765 PF12704 MacB-like periplasmic core domain FR741_21770 PF00005 ABC transporter FR741_21770 PF02687 FtsX-like permease family FR741_21770 PF12704 MacB-like periplasmic core domain FR741_21785 PF00990 Diguanylate cyclase, GGDEF domain FR741_21790 PF03889 Alternative ribosome-rescue factor A FR741_21795 PF00313 'Cold-shock' DNA-binding domain FR741_21815 PF13488 Glycine zipper FR741_21815 PF00691 OmpA family FR741_21825 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FR741_21825 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FR741_21830 PF01040 UbiA prenyltransferase family FR741_21835 PF02628 Cytochrome oxidase assembly protein FR741_21855 PF00510 Cytochrome c oxidase subunit III FR741_21860 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FR741_21865 PF00115 Cytochrome C and Quinol oxidase polypeptide I FR741_21870 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FR741_21870 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FR741_21875 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FR741_21875 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FR741_21875 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FR741_21875 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FR741_21885 PF01810 LysE type translocator FR741_21890 PF12833 Helix-turn-helix domain FR741_21905 PF01557 Fumarylacetoacetate (FAA) hydrolase family FR741_21925 PF00892 EamA-like transporter family FR741_21930 PF00462 Glutaredoxin FR741_21945 PF07690 Major Facilitator Superfamily FR741_21950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_21950 PF03466 LysR substrate binding domain FR741_21955 PF08447 PAS fold FR741_21955 PF00563 EAL domain FR741_21955 PF00990 Diguanylate cyclase, GGDEF domain FR741_21955 PF08448 PAS fold FR741_21960 PF01551 Peptidase family M23 FR741_21960 PF08525 Opacity-associated protein A N-terminal motif FR741_21960 PF01476 LysM domain FR741_21990 PF00672 HAMP domain FR741_21990 PF02743 Cache domain FR741_21990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FR741_22000 PF03222 Tryptophan/tyrosine permease family FR741_22030 PF00107 Zinc-binding dehydrogenase FR741_22030 PF08240 Alcohol dehydrogenase GroES-like domain FR741_22035 PF02378 Phosphotransferase system, EIIC FR741_22035 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FR741_22040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FR741_22060 PF01758 Sodium Bile acid symporter family FR741_22070 PF01161 Phosphatidylethanolamine-binding protein FR741_22075 PF02567 Phenazine biosynthesis-like protein FR741_22080 PF10282 Lactonase, 7-bladed beta-propeller FR741_22090 PF00005 ABC transporter FR741_22110 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FR741_22110 PF01568 Molydopterin dinucleotide binding domain FR741_22110 PF12838 4Fe-4S dicluster domain FR741_22110 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FR741_22110 PF00384 Molybdopterin oxidoreductase FR741_22135 PF00873 AcrB/AcrD/AcrF family FR741_22155 PF17151 Periplasmic sensor domain FR741_22155 PF00990 Diguanylate cyclase, GGDEF domain FR741_22165 PF13302 Acetyltransferase (GNAT) domain FR741_22180 PF00873 AcrB/AcrD/AcrF family FR741_22185 PF13533 Biotin-lipoyl like FR741_22195 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FR741_22195 PF00326 Prolyl oligopeptidase family FR741_22200 PF16326 ABC transporter C-terminal domain FR741_22200 PF00005 ABC transporter FR741_22200 PF12848 ABC transporter FR741_22205 PF00582 Universal stress protein family FR741_22210 PF02525 Flavodoxin-like fold FR741_22215 PF00999 Sodium/hydrogen exchanger family FR741_22215 PF02254 TrkA-N domain FR741_22230 PF00128 Alpha amylase, catalytic domain FR741_22235 PF13411 MerR HTH family regulatory protein FR741_22240 PF02627 Carboxymuconolactone decarboxylase family FR741_22250 PF08453 Peptidase family M9 N-terminal FR741_22250 PF04151 Bacterial pre-peptidase C-terminal domain FR741_22250 PF01752 Collagenase FR741_22260 PF17848 Acetyl-coA carboxylase zinc finger domain FR741_22260 PF01039 Carboxyl transferase domain FR741_22265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_22265 PF03466 LysR substrate binding domain FR741_22270 PF02743 Cache domain FR741_22270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FR741_22270 PF00672 HAMP domain FR741_22280 PF03824 High-affinity nickel-transport protein FR741_22285 PF02583 Metal-sensitive transcriptional repressor FR741_22305 PF01584 CheW-like domain FR741_22305 PF00072 Response regulator receiver domain FR741_22315 PF01243 Pyridoxamine 5'-phosphate oxidase FR741_22320 PF06228 Haem utilisation ChuX/HutX FR741_22325 PF04055 Radical SAM superfamily FR741_22330 PF03544 Gram-negative bacterial TonB protein C-terminal FR741_22335 PF01618 MotA/TolQ/ExbB proton channel family FR741_22340 PF02472 Biopolymer transport protein ExbD/TolR FR741_22350 PF01032 FecCD transport family FR741_22355 PF00005 ABC transporter FR741_22395 PF01467 Cytidylyltransferase-like FR741_22400 PF02540 NAD synthase FR741_22405 PF03473 MOSC domain FR741_22405 PF00111 2Fe-2S iron-sulfur cluster binding domain FR741_22405 PF03476 MOSC N-terminal beta barrel domain FR741_22405 PF03476 MOSC N-terminal beta barrel domain FR741_22405 PF03473 MOSC domain FR741_22405 PF00111 2Fe-2S iron-sulfur cluster binding domain FR741_22410 PF01679 Proteolipid membrane potential modulator FR741_22420 PF01979 Amidohydrolase family FR741_22425 PF05661 Protein of unknown function (DUF808) FR741_22455 PF00528 Binding-protein-dependent transport system inner membrane component FR741_22460 PF00528 Binding-protein-dependent transport system inner membrane component FR741_22460 PF14785 Maltose transport system permease protein MalF P2 domain FR741_22465 PF01547 Bacterial extracellular solute-binding protein FR741_22470 PF00005 ABC transporter FR741_22470 PF08402 TOBE domain FR741_22475 PF02397 Bacterial sugar transferase FR741_22490 PF02706 Chain length determinant protein FR741_22490 PF13807 G-rich domain on putative tyrosine kinase FR741_22490 PF13614 AAA domain FR741_22500 PF13439 Glycosyltransferase Family 4 FR741_22500 PF00534 Glycosyl transferases group 1 FR741_22535 PF00440 Bacterial regulatory proteins, tetR family FR741_22535 PF16925 Tetracyclin repressor-like, C-terminal domain FR741_22540 PF16884 N-terminal domain of oxidoreductase FR741_22540 PF00107 Zinc-binding dehydrogenase FR741_22545 PF13417 Glutathione S-transferase, N-terminal domain FR741_22550 PF06628 Catalase-related immune-responsive FR741_22550 PF00199 Catalase FR741_22555 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FR741_22555 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FR741_22565 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FR741_22575 PF12833 Helix-turn-helix domain FR741_22580 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FR741_22580 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FR741_22585 PF01238 Phosphomannose isomerase type I FR741_22595 PF18113 Rubredoxin binding C-terminal domain FR741_22595 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR741_22600 PF00753 Metallo-beta-lactamase superfamily FR741_22600 PF00301 Rubredoxin FR741_22600 PF00258 Flavodoxin FR741_22605 PF01590 GAF domain FR741_22605 PF00158 Sigma-54 interaction domain FR741_22610 PF13419 Haloacid dehalogenase-like hydrolase FR741_22615 PF00127 Copper binding proteins, plastocyanin/azurin family FR741_22620 PF02378 Phosphotransferase system, EIIC FR741_22630 PF01266 FAD dependent oxidoreductase FR741_22635 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR741_22635 PF18113 Rubredoxin binding C-terminal domain FR741_22640 PF00171 Aldehyde dehydrogenase family FR741_22645 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FR741_22645 PF00355 Rieske [2Fe-2S] domain FR741_22650 PF02028 BCCT, betaine/carnitine/choline family transporter FR741_22655 PF03466 LysR substrate binding domain FR741_22655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_22660 PF02386 Cation transport protein FR741_22665 PF02254 TrkA-N domain FR741_22665 PF02080 TrkA-C domain FR741_22670 PF00486 Transcriptional regulatory protein, C terminal FR741_22670 PF00072 Response regulator receiver domain FR741_22675 PF13493 Domain of unknown function (DUF4118) FR741_22675 PF02702 Osmosensitive K+ channel His kinase sensor domain FR741_22675 PF00512 His Kinase A (phospho-acceptor) domain FR741_22675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_22680 PF00664 ABC transporter transmembrane region FR741_22680 PF00005 ABC transporter FR741_22685 PF00593 TonB dependent receptor FR741_22685 PF07715 TonB-dependent Receptor Plug Domain FR741_22690 PF00005 ABC transporter FR741_22695 PF01497 Periplasmic binding protein FR741_22700 PF01032 FecCD transport family FR741_22710 PF00529 HlyD membrane-fusion protein of T1SS FR741_22715 PF00664 ABC transporter transmembrane region FR741_22715 PF00005 ABC transporter FR741_22725 PF00196 Bacterial regulatory proteins, luxR family FR741_22730 PF00196 Bacterial regulatory proteins, luxR family FR741_22740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FR741_22740 PF00672 HAMP domain FR741_22740 PF02743 Cache domain FR741_22750 PF17863 AAA lid domain FR741_22750 PF07726 ATPase family associated with various cellular activities (AAA) FR741_22755 PF01882 Protein of unknown function DUF58 FR741_22765 PF13519 von Willebrand factor type A domain FR741_22770 PF13519 von Willebrand factor type A domain FR741_22785 PF00005 ABC transporter FR741_22790 PF00528 Binding-protein-dependent transport system inner membrane component FR741_22795 PF00528 Binding-protein-dependent transport system inner membrane component FR741_22800 PF12849 PBP superfamily domain FR741_22805 PF12729 Four helix bundle sensory module for signal transduction FR741_22805 PF00672 HAMP domain FR741_22805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FR741_22825 PF07715 TonB-dependent Receptor Plug Domain FR741_22825 PF00593 TonB dependent receptor FR741_22830 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FR741_22830 PF00326 Prolyl oligopeptidase family FR741_22835 PF00271 Helicase conserved C-terminal domain FR741_22835 PF00270 DEAD/DEAH box helicase FR741_22845 PF00132 Bacterial transferase hexapeptide (six repeats) FR741_22915 PF01258 Prokaryotic dksA/traR C4-type zinc finger FR741_22985 PF05840 Bacteriophage replication gene A protein (GPA) FR741_23040 PF02899 Phage integrase, N-terminal SAM-like domain FR741_23040 PF00589 Phage integrase family FR741_23045 PF01476 LysM domain FR741_23045 PF17969 L,D-transpeptidase C-terminal domain FR741_23045 PF03734 L,D-transpeptidase catalytic domain FR741_23050 PF03441 FAD binding domain of DNA photolyase FR741_23050 PF00875 DNA photolyase FR741_23055 PF13411 MerR HTH family regulatory protein FR741_23060 PF08349 Protein of unknown function (DUF1722) FR741_23065 PF01048 Phosphorylase superfamily FR741_23080 PF00990 Diguanylate cyclase, GGDEF domain FR741_23085 PF11742 Protein of unknown function (DUF3302) FR741_23090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FR741_23090 PF00529 HlyD membrane-fusion protein of T1SS FR741_23095 PF07155 ECF-type riboflavin transporter, S component FR741_23100 PF12558 ATP-binding cassette cobalt transporter FR741_23100 PF00005 ABC transporter FR741_23120 PF13237 4Fe-4S dicluster domain FR741_23120 PF12801 4Fe-4S binding domain FR741_23125 PF12838 4Fe-4S dicluster domain FR741_23125 PF12800 4Fe-4S binding domain FR741_23130 PF00583 Acetyltransferase (GNAT) family FR741_23145 PF12945 Flagellar protein YcgR FR741_23145 PF07238 PilZ domain FR741_23150 PF13609 Gram-negative porin FR741_23155 PF00672 HAMP domain FR741_23155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FR741_23155 PF17200 Single Cache domain 2 FR741_23160 PF05362 Lon protease (S16) C-terminal proteolytic domain FR741_23160 PF13654 AAA domain FR741_23170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FR741_23170 PF00005 ABC transporter FR741_23175 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FR741_23175 PF00326 Prolyl oligopeptidase family FR741_23180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_23180 PF03466 LysR substrate binding domain FR741_23185 PF02652 L-lactate permease FR741_23190 PF01070 FMN-dependent dehydrogenase FR741_23200 PF00924 Mechanosensitive ion channel FR741_23205 PF00194 Eukaryotic-type carbonic anhydrase FR741_23235 PF00107 Zinc-binding dehydrogenase FR741_23235 PF08240 Alcohol dehydrogenase GroES-like domain FR741_23240 PF00155 Aminotransferase class I and II FR741_23245 PF00563 EAL domain FR741_23245 PF00990 Diguanylate cyclase, GGDEF domain FR741_23245 PF03707 Bacterial signalling protein N terminal repeat FR741_23245 PF13188 PAS domain FR741_23250 PF00497 Bacterial extracellular solute-binding proteins, family 3 FR741_23260 PF00080 Copper/zinc superoxide dismutase (SODC) FR741_23265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_23265 PF00512 His Kinase A (phospho-acceptor) domain FR741_23270 PF00072 Response regulator receiver domain FR741_23270 PF00486 Transcriptional regulatory protein, C terminal FR741_23290 PF03466 LysR substrate binding domain FR741_23290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_23295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FR741_23325 PF03466 LysR substrate binding domain FR741_23325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_23340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FR741_23340 PF18269 T3SS EscN ATPase C-terminal domain FR741_23350 PF01706 FliG C-terminal domain FR741_23350 PF14842 FliG N-terminal domain FR741_23350 PF14841 FliG middle domain FR741_23355 PF08345 Flagellar M-ring protein C-terminal FR741_23355 PF01514 Secretory protein of YscJ/FliF family FR741_23360 PF02049 Flagellar hook-basal body complex protein FliE FR741_23365 PF02954 Bacterial regulatory protein, Fis family FR741_23365 PF00072 Response regulator receiver domain FR741_23365 PF00158 Sigma-54 interaction domain FR741_23380 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FR741_23385 PF00813 FliP family FR741_23390 PF01313 Bacterial export proteins, family 3 FR741_23395 PF01311 Bacterial export proteins, family 1 FR741_23400 PF01312 FlhB HrpN YscU SpaS Family FR741_23405 PF00771 FHIPEP family FR741_23415 PF00669 Bacterial flagellin N-terminal helical region FR741_23415 PF00700 Bacterial flagellin C-terminal helical region FR741_23430 PF07195 Flagellar hook-associated protein 2 C-terminus FR741_23430 PF07196 Flagellin hook IN motif FR741_23430 PF02465 Flagellar hook-associated protein 2 N-terminus FR741_23435 PF02561 Flagellar protein FliS FR741_23450 PF03748 Flagellar basal body-associated protein FliL FR741_23455 PF04545 Sigma-70, region 4 FR741_23455 PF04542 Sigma-70 region 2 FR741_23460 PF01618 MotA/TolQ/ExbB proton channel family FR741_23465 PF00691 OmpA family FR741_23465 PF13677 Membrane MotB of proton-channel complex MotA/MotB FR741_23480 PF08000 Bacterial PH domain FR741_23520 PF01228 Glycine radical FR741_23520 PF02901 Pyruvate formate lyase-like FR741_23525 PF04055 Radical SAM superfamily FR741_23530 PF00923 Transaldolase/Fructose-6-phosphate aldolase FR741_23540 PF00583 Acetyltransferase (GNAT) family FR741_23550 PF07690 Major Facilitator Superfamily FR741_23555 PF03466 LysR substrate binding domain FR741_23555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_23560 PF00892 EamA-like transporter family FR741_23585 PF13533 Biotin-lipoyl like FR741_23595 PF01594 AI-2E family transporter FR741_23600 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FR741_23605 PF00970 Oxidoreductase FAD-binding domain FR741_23605 PF00175 Oxidoreductase NAD-binding domain FR741_23615 PF09905 DNA-binding protein VF530 FR741_23620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_23620 PF03466 LysR substrate binding domain FR741_23630 PF00881 Nitroreductase family FR741_23635 PF12833 Helix-turn-helix domain FR741_23635 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FR741_23640 PF00686 Starch binding domain FR741_23640 PF00128 Alpha amylase, catalytic domain FR741_23645 PF00768 D-alanyl-D-alanine carboxypeptidase FR741_23645 PF07943 Penicillin-binding protein 5, C-terminal domain FR741_23650 PF00561 alpha/beta hydrolase fold FR741_23665 PF00875 DNA photolyase FR741_23665 PF03441 FAD binding domain of DNA photolyase FR741_23670 PF02469 Fasciclin domain FR741_23675 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading FR741_23675 PF18416 N-acetylglucosamine binding protein domain 2 FR741_23680 PF01734 Patatin-like phospholipase FR741_23685 PF01914 MarC family integral membrane protein FR741_23690 PF00881 Nitroreductase family FR741_23700 PF10531 SLBB domain FR741_23700 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FR741_23700 PF02563 Polysaccharide biosynthesis/export protein FR741_23705 PF01451 Low molecular weight phosphotyrosine protein phosphatase FR741_23710 PF02706 Chain length determinant protein FR741_23710 PF13807 G-rich domain on putative tyrosine kinase FR741_23710 PF13614 AAA domain FR741_23720 PF00375 Sodium:dicarboxylate symporter family FR741_23735 PF06803 Protein of unknown function (DUF1232) FR741_23740 PF01546 Peptidase family M20/M25/M40 FR741_23740 PF07687 Peptidase dimerisation domain FR741_23745 PF07670 Nucleoside recognition FR741_23750 PF07670 Nucleoside recognition FR741_23765 PF00128 Alpha amylase, catalytic domain FR741_23770 PF00912 Transglycosylase FR741_23775 PF00128 Alpha amylase, catalytic domain FR741_23775 PF02806 Alpha amylase, C-terminal all-beta domain FR741_23775 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FR741_23780 PF02446 4-alpha-glucanotransferase FR741_23785 PF00343 Carbohydrate phosphorylase FR741_23795 PF17874 MalT-like TPR region FR741_23795 PF00196 Bacterial regulatory proteins, luxR family FR741_23810 PF02630 SCO1/SenC FR741_23815 PF02378 Phosphotransferase system, EIIC FR741_23815 PF00367 phosphotransferase system, EIIB FR741_23820 PF03193 RsgA GTPase FR741_23825 PF00375 Sodium:dicarboxylate symporter family FR741_23830 PF08543 Phosphomethylpyrimidine kinase FR741_23840 PF13520 Amino acid permease FR741_23845 PF01276 Orn/Lys/Arg decarboxylase, major domain FR741_23845 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FR741_23845 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FR741_23860 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FR741_23860 PF11852 Domain of unknown function (DUF3372) FR741_23860 PF17967 Pullulanase N2 domain FR741_23860 PF03714 Bacterial pullanase-associated domain FR741_23860 PF18494 Pullulanase Ins domain FR741_23865 PF04231 Endonuclease I FR741_23870 PF00128 Alpha amylase, catalytic domain FR741_23870 PF02903 Alpha amylase, N-terminal ig-like domain FR741_23870 PF16657 Maltogenic Amylase, C-terminal domain FR741_23885 PF02264 LamB porin FR741_23890 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FR741_23890 PF00128 Alpha amylase, catalytic domain FR741_23900 PF07690 Major Facilitator Superfamily FR741_23925 PF04225 Opacity-associated protein A LysM-like domain FR741_23925 PF01551 Peptidase family M23 FR741_23935 PF00675 Insulinase (Peptidase family M16) FR741_23935 PF05193 Peptidase M16 inactive domain FR741_23940 PF00672 HAMP domain FR741_23940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FR741_23940 PF17200 Single Cache domain 2 FR741_23945 PF00005 ABC transporter FR741_23950 PF01032 FecCD transport family FR741_23955 PF01032 FecCD transport family FR741_23960 PF01497 Periplasmic binding protein FR741_23965 PF07715 TonB-dependent Receptor Plug Domain FR741_23965 PF07660 Secretin and TonB N terminus short domain FR741_23965 PF00593 TonB dependent receptor FR741_23970 PF00593 TonB dependent receptor FR741_23970 PF07715 TonB-dependent Receptor Plug Domain FR741_23975 PF00206 Lyase FR741_23975 PF02655 ATP-grasp domain FR741_23980 PF06276 Ferric iron reductase FhuF-like transporter FR741_23980 PF04183 IucA / IucC family FR741_23990 PF04183 IucA / IucC family FR741_23990 PF06276 Ferric iron reductase FhuF-like transporter FR741_23995 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FR741_23995 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FR741_24000 PF01547 Bacterial extracellular solute-binding protein FR741_24005 PF08521 Two-component sensor kinase N-terminal FR741_24005 PF00512 His Kinase A (phospho-acceptor) domain FR741_24005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_24010 PF00486 Transcriptional regulatory protein, C terminal FR741_24010 PF00072 Response regulator receiver domain FR741_24020 PF02378 Phosphotransferase system, EIIC FR741_24020 PF00367 phosphotransferase system, EIIB FR741_24035 PF13847 Methyltransferase domain FR741_24045 PF00535 Glycosyl transferase family 2 FR741_24060 PF00005 ABC transporter FR741_24080 PF02566 OsmC-like protein FR741_24085 PF01047 MarR family FR741_24090 PF10417 C-terminal domain of 1-Cys peroxiredoxin FR741_24090 PF00578 AhpC/TSA family FR741_24095 PF07992 Pyridine nucleotide-disulphide oxidoreductase FR741_24095 PF13192 Thioredoxin domain FR741_24115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FR741_24115 PF03466 LysR substrate binding domain FR741_24125 PF01965 DJ-1/PfpI family FR741_24125 PF12833 Helix-turn-helix domain FR741_24130 PF04542 Sigma-70 region 2 FR741_24130 PF08281 Sigma-70, region 4 FR741_24150 PF03475 3-alpha domain FR741_24150 PF03473 MOSC domain FR741_24175 PF12833 Helix-turn-helix domain FR741_24175 PF06719 AraC-type transcriptional regulator N-terminus FR741_24185 PF00664 ABC transporter transmembrane region FR741_24185 PF00005 ABC transporter FR741_24195 PF01037 Lrp/AsnC ligand binding domain FR741_24205 PF13302 Acetyltransferase (GNAT) domain FR741_24220 PF00474 Sodium:solute symporter family FR741_24230 PF14850 DNA-binding domain of Proline dehydrogenase FR741_24230 PF00171 Aldehyde dehydrogenase family FR741_24230 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FR741_24230 PF01619 Proline dehydrogenase FR741_24235 PF12833 Helix-turn-helix domain FR741_24245 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FR741_24245 PF01243 Pyridoxamine 5'-phosphate oxidase FR741_24250 PF02743 Cache domain FR741_24250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FR741_24250 PF00512 His Kinase A (phospho-acceptor) domain FR741_24255 PF02954 Bacterial regulatory protein, Fis family FR741_24255 PF00072 Response regulator receiver domain FR741_24255 PF00158 Sigma-54 interaction domain FR741_24260 PF00529 HlyD membrane-fusion protein of T1SS FR741_24275 PF03412 Peptidase C39 family FR741_24275 PF00005 ABC transporter FR741_24275 PF00664 ABC transporter transmembrane region FR741_24295 PF03358 NADPH-dependent FMN reductase FR741_24300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FR741_24305 PF00246 Zinc carboxypeptidase FR741_24310 PF01380 SIS domain FR741_24310 PF01418 Helix-turn-helix domain, rpiR family FR741_24320 PF01380 SIS domain FR741_24325 PF02378 Phosphotransferase system, EIIC FR741_24325 PF00367 phosphotransferase system, EIIB FR741_24330 PF00267 Gram-negative porin FR741_24335 PF03575 Peptidase family S51 FR741_24345 PF00132 Bacterial transferase hexapeptide (six repeats) FR741_24355 PF13718 GNAT acetyltransferase 2 FR741_24355 PF05127 Helicase FR741_24360 PF08775 ParB family FR741_24360 PF02195 ParB-like nuclease domain FR741_24365 PF13614 AAA domain FR741_24365 PF18607 ParA helix turn helix domain