AL552_00010	PF00171	Aldehyde dehydrogenase family
AL552_00015	PF01042	Endoribonuclease L-PSP
AL552_00020	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_00020	PF03466	LysR substrate binding domain
AL552_00025	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AL552_00035	PF01040	UbiA prenyltransferase family
AL552_00040	PF03626	AL552_00040
AL552_00045	PF00510	Cytochrome c oxidase subunit III
AL552_00050	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AL552_00055	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
AL552_00055	PF06481	COX Aromatic Rich Motif
AL552_00060	PF13561	Enoyl-(Acyl carrier protein) reductase
AL552_00065	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL552_00065	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AL552_00070	PF16113	AL552_00070
AL552_00075	PF00378	Enoyl-CoA hydratase/isomerase family
AL552_00080	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL552_00080	PF02770	Acyl-CoA dehydrogenase, middle domain
AL552_00080	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL552_00085	PF00171	Aldehyde dehydrogenase family
AL552_00090	PF00108	Thiolase, N-terminal domain
AL552_00090	PF02803	Thiolase, C-terminal domain
AL552_00095	PF00376	MerR family regulatory protein
AL552_00095	PF09278	MerR, DNA binding
AL552_00100	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL552_00100	PF02770	Acyl-CoA dehydrogenase, middle domain
AL552_00100	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL552_00105	PF01039	Carboxyl transferase domain
AL552_00110	PF00378	Enoyl-CoA hydratase/isomerase family
AL552_00115	PF00682	HMGL-like
AL552_00120	PF10063	AL552_00120
AL552_00125	PF00892	EamA-like transporter family
AL552_00130	PF01565	FAD binding domain
AL552_00130	PF02913	FAD linked oxidases, C-terminal domain
AL552_00130	PF13183	4Fe-4S dicluster domain
AL552_00135	PF04909	Amidohydrolase
AL552_00140	PF12146	Putative lysophospholipase
AL552_00145	PF01965	DJ-1/PfpI family
AL552_00145	PF12833	Helix-turn-helix domain
AL552_00150	PF03972	MmgE/PrpD family
AL552_00155	PF00795	Carbon-nitrogen hydrolase
AL552_00160	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
AL552_00165	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_00170	PF00005	ABC transporter
AL552_00170	PF00571	CBS domain
AL552_00180	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL552_00180	PF08447	PAS fold
AL552_00180	PF13426	PAS domain
AL552_00185	PF00871	Acetokinase family
AL552_00195	PF00563	EAL domain
AL552_00195	PF00990	GGDEF domain
AL552_00200	PF00270	DEAD/DEAH box helicase
AL552_00200	PF00271	Helicase conserved C-terminal domain
AL552_00200	PF03880	DbpA RNA binding domain
AL552_00205	PF00575	S1 RNA binding domain
AL552_00205	PF00773	RNB domain
AL552_00205	PF08206	Ribonuclease B OB domain
AL552_00210	PF12833	Helix-turn-helix domain
AL552_00215	PF11225	AL552_00215
AL552_00220	PF12849	PBP superfamily domain
AL552_00225	PF01575	MaoC like domain
AL552_00235	PF00589	Phage integrase family
AL552_00245	PF00589	Phage integrase family
AL552_00265	PF01381	Helix-turn-helix
AL552_00270	PF14516	AL552_00270
AL552_00275	PF13365	Trypsin-like peptidase domain
AL552_00280	PF00753	Metallo-beta-lactamase superfamily
AL552_00285	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL552_00285	PF08447	PAS fold
AL552_00290	PF00005	ABC transporter
AL552_00295	PF00563	EAL domain
AL552_00295	PF12792	AL552_00295
AL552_00300	PF01614	Bacterial transcriptional regulator
AL552_00300	PF09339	IclR helix-turn-helix domain
AL552_00305	PF00491	Arginase family
AL552_00315	PF00270	DEAD/DEAH box helicase
AL552_00315	PF00271	Helicase conserved C-terminal domain
AL552_00320	PF02492	CobW/HypB/UreG, nucleotide-binding domain
AL552_00330	PF01470	Pyroglutamyl peptidase
AL552_00340	PF00313	'Cold-shock' DNA-binding domain
AL552_00345	PF00575	S1 RNA binding domain
AL552_00345	PF00773	RNB domain
AL552_00345	PF08206	Ribonuclease B OB domain
AL552_00350	PF00291	Pyridoxal-phosphate dependent enzyme
AL552_00355	PF11840	AL552_00355
AL552_00360	PF09905	Uncharacterized conserved protein (DUF2132)
AL552_00365	PF00270	DEAD/DEAH box helicase
AL552_00365	PF00271	Helicase conserved C-terminal domain
AL552_00375	PF01925	AL552_00375
AL552_00395	PF12680	SnoaL-like domain
AL552_00405	PF00107	Zinc-binding dehydrogenase
AL552_00405	PF08240	Alcohol dehydrogenase GroES-like domain
AL552_00410	PF13474	SnoaL-like domain
AL552_00415	PF01638	HxlR-like helix-turn-helix
AL552_00425	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_00425	PF03466	LysR substrate binding domain
AL552_00435	PF13354	Beta-lactamase enzyme family
AL552_00440	PF04892	AL552_00440
AL552_00445	PF01965	DJ-1/PfpI family
AL552_00445	PF12833	Helix-turn-helix domain
AL552_00450	PF13483	Beta-lactamase superfamily domain
AL552_00460	PF00005	ABC transporter
AL552_00465	PF01032	FecCD transport family
AL552_00470	PF01497	Periplasmic binding protein
AL552_00480	PF00486	Transcriptional regulatory protein, C terminal
AL552_00485	PF13505	Outer membrane protein beta-barrel domain
AL552_00500	PF07308	AL552_00500
AL552_00515	PF00082	Subtilase family
AL552_00515	PF04151	Bacterial pre-peptidase C-terminal domain
AL552_00515	PF05922	Peptidase inhibitor I9
AL552_00535	PF12843	AL552_00535
AL552_00540	PF06945	AL552_00540
AL552_00540	PF14375	AL552_00540
AL552_00545	PF08888	HopJ type III effector protein
AL552_00555	PF01329	Pterin 4 alpha carbinolamine dehydratase
AL552_00560	PF00351	Biopterin-dependent aromatic amino acid hydroxylase
AL552_00565	PF00501	AMP-binding enzyme
AL552_00565	PF13193	AMP-binding enzyme C-terminal domain
AL552_00565	PF16177	AL552_00565
AL552_00570	PF13489	Methyltransferase domain
AL552_00575	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_00575	PF03466	LysR substrate binding domain
AL552_00580	PF01545	Cation efflux family
AL552_00585	PF00892	EamA-like transporter family
AL552_00595	PF00465	Iron-containing alcohol dehydrogenase
AL552_00600	PF07995	Glucose / Sorbosone dehydrogenase
AL552_00605	PF13419	Haloacid dehalogenase-like hydrolase
AL552_00610	PF00210	Ferritin-like domain
AL552_00615	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL552_00615	PF00672	HAMP domain
AL552_00615	PF12729	AL552_00615
AL552_00625	PF00005	ABC transporter
AL552_00635	PF02687	AL552_00635
AL552_00635	PF12704	MacB-like periplasmic core domain
AL552_00640	PF17131	AL552_00640
AL552_00645	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL552_00645	PF00990	GGDEF domain
AL552_00650	PF03889	AL552_00650
AL552_00655	PF00313	'Cold-shock' DNA-binding domain
AL552_00660	PF07152	YaeQ protein
AL552_00670	PF00462	Glutaredoxin
AL552_00675	PF00691	OmpA family
AL552_00680	PF13462	Thioredoxin
AL552_00685	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL552_00685	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
AL552_00690	PF01040	UbiA prenyltransferase family
AL552_00695	PF02628	AL552_00695
AL552_00705	PF02104	AL552_00705
AL552_00710	PF11137	AL552_00710
AL552_00715	PF00510	Cytochrome c oxidase subunit III
AL552_00720	PF04442	Cytochrome c oxidase assembly protein CtaG/Cox11
AL552_00725	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AL552_00730	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
AL552_00730	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
AL552_00730	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
AL552_00735	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL552_00735	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL552_00735	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL552_00735	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL552_00740	PF00583	Acetyltransferase (GNAT) family
AL552_00745	PF01810	AL552_00745
AL552_00750	PF02311	AraC-like ligand binding domain
AL552_00750	PF12833	Helix-turn-helix domain
AL552_00760	PF05437	AL552_00760
AL552_00765	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL552_00770	PF13609	Gram-negative porin
AL552_00775	PF13609	Gram-negative porin
AL552_00780	PF00892	EamA-like transporter family
AL552_00785	PF00462	Glutaredoxin
AL552_00800	PF07690	Major Facilitator Superfamily
AL552_00805	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_00805	PF03466	LysR substrate binding domain
AL552_00810	PF00563	EAL domain
AL552_00810	PF00990	GGDEF domain
AL552_00815	PF01551	Peptidase family M23
AL552_00815	PF04225	Opacity-associated protein A LysM-like domain
AL552_00825	PF04828	Glutathione-dependent formaldehyde-activating enzyme
AL552_00830	PF06912	AL552_00830
AL552_00845	PF07670	Nucleoside recognition
AL552_00850	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL552_00850	PF00672	HAMP domain
AL552_00850	PF02743	Cache domain
AL552_00860	PF03222	Tryptophan/tyrosine permease family
AL552_00875	PF13560	Helix-turn-helix domain
AL552_00885	PF00485	Phosphoribulokinase / Uridine kinase family
AL552_00890	PF05068	Mannitol repressor
AL552_00895	PF00107	Zinc-binding dehydrogenase
AL552_00895	PF08240	Alcohol dehydrogenase GroES-like domain
AL552_00900	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL552_00900	PF02378	Phosphotransferase system, EIIC
AL552_00905	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL552_00915	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL552_00915	PF12793	AL552_00915
AL552_00920	PF01022	Bacterial regulatory protein, arsR family
AL552_00925	PF01758	Sodium Bile acid symporter family
AL552_00930	PF12833	Helix-turn-helix domain
AL552_00935	PF01161	Phosphatidylethanolamine-binding protein
AL552_00940	PF02567	Phenazine biosynthesis-like protein
AL552_00945	PF10282	Lactonase, 7-bladed beta-propeller
AL552_00955	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL552_00955	PF12729	AL552_00955
AL552_00960	PF13437	HlyD family secretion protein
AL552_00965	PF00005	ABC transporter
AL552_00970	PF12698	ABC-2 family transporter protein
AL552_00980	PF03372	Endonuclease/Exonuclease/phosphatase family
AL552_00985	PF00037	4Fe-4S binding domain
AL552_00985	PF00384	Molybdopterin oxidoreductase
AL552_00985	PF01568	Molydopterin dinucleotide binding domain
AL552_00985	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL552_00985	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL552_00985	PF13510	2Fe-2S iron-sulfur cluster binding domain
AL552_00985	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
AL552_01000	PF02321	Outer membrane efflux protein
AL552_01005	PF11604	Copper binding periplasmic protein CusF
AL552_01005	PF16576	AL552_01005
AL552_01010	PF00873	AcrB/AcrD/AcrF family
AL552_01020	PF00175	Oxidoreductase NAD-binding domain
AL552_01020	PF01794	AL552_01020
AL552_01020	PF08022	AL552_01020
AL552_01025	PF13354	Beta-lactamase enzyme family
AL552_01030	PF00990	GGDEF domain
AL552_01030	PF01590	GAF domain
AL552_01040	PF13302	Acetyltransferase (GNAT) domain
AL552_01050	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
AL552_01055	PF00873	AcrB/AcrD/AcrF family
AL552_01060	PF13437	HlyD family secretion protein
AL552_01060	PF13533	Biotin-lipoyl like
AL552_01070	PF00326	Prolyl oligopeptidase family
AL552_01070	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
AL552_01075	PF00005	ABC transporter
AL552_01080	PF00582	Universal stress protein family
AL552_01085	PF02525	Flavodoxin-like fold
AL552_01090	PF00999	Sodium/hydrogen exchanger family
AL552_01090	PF02254	TrkA-N domain
AL552_01100	PF12840	Helix-turn-helix domain
AL552_01105	PF00128	Alpha amylase, catalytic domain
AL552_01110	PF13411	MerR HTH family regulatory protein
AL552_01115	PF02627	Carboxymuconolactone decarboxylase family
AL552_01120	PF09016	Pas factor saposin fold
AL552_01125	PF01752	Collagenase
AL552_01125	PF04151	Bacterial pre-peptidase C-terminal domain
AL552_01125	PF08453	Peptidase family M9 N-terminal
AL552_01140	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_01140	PF03466	LysR substrate binding domain
AL552_01145	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL552_01145	PF00672	HAMP domain
AL552_01145	PF17203	AL552_01145
AL552_01155	PF03824	AL552_01155
AL552_01160	PF02583	Metal-sensitive transcriptional repressor
AL552_01165	PF00882	Zinc dependent phospholipase C
AL552_01175	PF13616	PPIC-type PPIASE domain
AL552_01180	PF00072	Response regulator receiver domain
AL552_01180	PF01584	CheW-like domain
AL552_01185	PF01923	Cobalamin adenosyltransferase
AL552_01190	PF01243	Pyridoxamine 5'-phosphate oxidase
AL552_01195	PF06228	Haem utilisation ChuX/HutX
AL552_01205	PF03544	Gram-negative bacterial TonB protein C-terminal
AL552_01210	PF01618	AL552_01210
AL552_01215	PF02472	Biopolymer transport protein ExbD/TolR
AL552_01220	PF01497	Periplasmic binding protein
AL552_01225	PF01032	FecCD transport family
AL552_01230	PF00005	ABC transporter
AL552_01240	PF04175	Protein of unknown function (DUF406)
AL552_01245	PF07383	AL552_01245
AL552_01255	PF01553	Acyltransferase
AL552_01275	PF01467	Cytidylyltransferase
AL552_01280	PF02540	NAD synthase
AL552_01290	PF01679	AL552_01290
AL552_01300	PF01979	Amidohydrolase family
AL552_01305	PF05661	AL552_01305
AL552_01310	PF00246	Zinc carboxypeptidase
AL552_01315	PF12833	Helix-turn-helix domain
AL552_01320	PF00892	EamA-like transporter family
AL552_01325	PF03061	Thioesterase superfamily
AL552_01335	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_01340	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_01340	PF14785	Maltose transport system permease protein MalF P2 domain
AL552_01345	PF13416	Bacterial extracellular solute-binding protein
AL552_01350	PF00005	ABC transporter
AL552_01350	PF08402	TOBE domain
AL552_01360	PF10082	AL552_01360
AL552_01365	PF02563	Polysaccharide biosynthesis/export protein
AL552_01365	PF10531	SLBB domain
AL552_01370	PF02706	Chain length determinant protein
AL552_01370	PF13614	AAA domain
AL552_01370	PF13807	AL552_01370
AL552_01375	PF10364	AL552_01375
AL552_01380	PF00534	Glycosyl transferases group 1
AL552_01380	PF13439	Glycosyltransferase Family 4
AL552_01385	PF04932	AL552_01385
AL552_01390	PF10364	AL552_01390
AL552_01395	PF13579	Glycosyl transferase 4-like domain
AL552_01395	PF13692	Glycosyl transferases group 1
AL552_01400	PF01943	AL552_01400
AL552_01400	PF14667	Polysaccharide biosynthesis C-terminal domain
AL552_01405	PF04892	AL552_01405
AL552_01410	PF04266	ASCH domain
AL552_01415	PF00440	Bacterial regulatory proteins, tetR family
AL552_01415	PF16925	AL552_01415
AL552_01420	PF00107	Zinc-binding dehydrogenase
AL552_01420	PF16884	AL552_01420
AL552_01425	PF00043	Glutathione S-transferase, C-terminal domain
AL552_01425	PF02798	Glutathione S-transferase, N-terminal domain
AL552_01430	PF00199	Catalase
AL552_01430	PF06628	Catalase-related immune-responsive
AL552_01435	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL552_01435	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AL552_01440	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL552_01440	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL552_01440	PF02378	Phosphotransferase system, EIIC
AL552_01445	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL552_01450	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL552_01450	PF00381	PTS HPr component phosphorylation site
AL552_01455	PF12833	Helix-turn-helix domain
AL552_01460	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL552_01460	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL552_01460	PF02378	Phosphotransferase system, EIIC
AL552_01465	PF01238	Phosphomannose isomerase type I
AL552_01470	PF09313	Domain of unknown function (DUF1971)
AL552_01475	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL552_01480	PF00258	Flavodoxin
AL552_01480	PF00301	Rubredoxin
AL552_01480	PF00753	Metallo-beta-lactamase superfamily
AL552_01490	PF13419	Haloacid dehalogenase-like hydrolase
AL552_01495	PF00127	Copper binding proteins, plastocyanin/azurin family
AL552_01500	PF00563	EAL domain
AL552_01500	PF02378	Phosphotransferase system, EIIC
AL552_01505	PF06249	Ethanolamine utilisation protein EutQ
AL552_01510	PF01266	FAD dependent oxidoreductase
AL552_01515	PF00301	Rubredoxin
AL552_01515	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL552_01520	PF00171	Aldehyde dehydrogenase family
AL552_01525	PF00355	Rieske [2Fe-2S] domain
AL552_01525	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
AL552_01530	PF02028	BCCT family transporter
AL552_01535	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_01535	PF03466	LysR substrate binding domain
AL552_01545	PF02028	BCCT family transporter
AL552_01550	PF00392	Bacterial regulatory proteins, gntR family
AL552_01550	PF07702	UTRA domain
AL552_01555	PF13343	Bacterial extracellular solute-binding protein
AL552_01560	PF01663	Type I phosphodiesterase / nucleotide pyrophosphatase
AL552_01565	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_01570	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_01575	PF00005	ABC transporter
AL552_01575	PF08402	TOBE domain
AL552_01580	PF12710	haloacid dehalogenase-like hydrolase
AL552_01600	PF00873	AcrB/AcrD/AcrF family
AL552_01605	PF13437	HlyD family secretion protein
AL552_01605	PF13533	Biotin-lipoyl like
AL552_01610	PF13091	PLD-like domain
AL552_01615	PF13649	Methyltransferase domain
AL552_01620	PF04266	ASCH domain
AL552_01625	PF13181	Tetratricopeptide repeat
AL552_01630	PF09622	AL552_01630
AL552_01635	PF00376	MerR family regulatory protein
AL552_01635	PF09278	MerR, DNA binding
AL552_01640	PF07690	Major Facilitator Superfamily
AL552_01650	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_01650	PF03466	LysR substrate binding domain
AL552_01655	PF07755	Protein of unknown function (DUF1611)
AL552_01655	PF17396	AL552_01655
AL552_01660	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
AL552_01660	PF13378	Enolase C-terminal domain-like
AL552_01670	PF00009	Elongation factor Tu GTP binding domain
AL552_01670	PF00679	Elongation factor G C-terminus
AL552_01670	PF03764	Elongation factor G, domain IV
AL552_01670	PF14492	Elongation Factor G, domain II
AL552_01685	PF04400	AL552_01685
AL552_01690	PF02579	Dinitrogenase iron-molybdenum cofactor
AL552_01695	PF02001	AL552_01695
AL552_01705	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_01710	PF00005	ABC transporter
AL552_01715	PF04170	NlpE N-terminal domain
AL552_01720	PF06629	AL552_01720
AL552_01725	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL552_01725	PF12793	AL552_01725
AL552_01730	PF01389	OmpA-like transmembrane domain
AL552_01735	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_01735	PF03466	LysR substrate binding domain
AL552_01740	PF00892	EamA-like transporter family
AL552_01750	PF05433	AL552_01750
AL552_01760	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
AL552_01765	PF00293	NUDIX domain
AL552_01770	PF00857	Isochorismatase family
AL552_01775	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL552_01780	PF00455	AL552_01780
AL552_01780	PF08220	DeoR-like helix-turn-helix domain
AL552_01785	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL552_01790	PF01625	Peptide methionine sulfoxide reductase
AL552_01795	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL552_01800	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL552_01805	PF03060	Nitronate monooxygenase
AL552_01810	PF13520	Amino acid permease
AL552_01820	PF06751	Ethanolamine ammonia lyase large subunit (EutB)
AL552_01825	PF12833	Helix-turn-helix domain
AL552_01830	PF00440	Bacterial regulatory proteins, tetR family
AL552_01840	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL552_01845	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_01845	PF03466	LysR substrate binding domain
AL552_01850	PF01810	AL552_01850
AL552_01855	PF07968	Leukocidin/Hemolysin toxin family
AL552_01865	PF00118	TCP-1/cpn60 chaperonin family
AL552_01870	PF00166	Chaperonin 10 Kd subunit
AL552_01875	PF00581	Rhodanese-like domain
AL552_01880	PF04828	Glutathione-dependent formaldehyde-activating enzyme
AL552_01885	PF11216	AL552_01885
AL552_01890	PF01070	FMN-dependent dehydrogenase
AL552_01895	PF00999	Sodium/hydrogen exchanger family
AL552_01895	PF02254	TrkA-N domain
AL552_01900	PF10101	AL552_01900
AL552_01910	PF00669	Bacterial flagellin N-terminal helical region
AL552_01920	PF10135	AL552_01920
AL552_01925	PF02119	AL552_01925
AL552_01930	PF02107	AL552_01930
AL552_01935	PF00460	Flagella basal body rod protein
AL552_01935	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL552_01940	PF00460	Flagella basal body rod protein
AL552_01940	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL552_01945	PF00460	Flagella basal body rod protein
AL552_01945	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL552_01945	PF07559	Flagellar basal body protein FlaE
AL552_01950	PF03963	AL552_01950
AL552_01950	PF13860	FlgD Ig-like domain
AL552_01950	PF13861	FlgD Tudor-like domain
AL552_01955	PF00460	Flagella basal body rod protein
AL552_01955	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL552_01960	PF00460	Flagella basal body rod protein
AL552_01965	PF13144	SAF-like
AL552_01970	PF04316	Anti-sigma-28 factor, FlgM
AL552_01975	PF05130	FlgN protein
AL552_01980	PF01464	Transglycosylase SLT domain
AL552_01985	PF00293	NUDIX domain
AL552_01990	PF03891	AL552_01990
AL552_02000	PF02698	DUF218 domain
AL552_02005	PF03313	AL552_02005
AL552_02005	PF03315	Serine dehydratase beta chain
AL552_02010	PF07690	Major Facilitator Superfamily
AL552_02020	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_02020	PF03466	LysR substrate binding domain
AL552_02025	PF01636	Phosphotransferase enzyme family
AL552_02030	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_02030	PF03466	LysR substrate binding domain
AL552_02035	PF00691	OmpA family
AL552_02035	PF01389	OmpA-like transmembrane domain
AL552_02040	PF00246	Zinc carboxypeptidase
AL552_02045	PF01266	FAD dependent oxidoreductase
AL552_02050	PF11777	AL552_02050
AL552_02055	PF04393	AL552_02055
AL552_02060	PF13505	Outer membrane protein beta-barrel domain
AL552_02065	PF00892	EamA-like transporter family
AL552_02070	PF00392	Bacterial regulatory proteins, gntR family
AL552_02070	PF07702	UTRA domain
AL552_02075	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_02080	PF00005	ABC transporter
AL552_02080	PF08402	TOBE domain
AL552_02085	PF13343	Bacterial extracellular solute-binding protein
AL552_02090	PF00266	Aminotransferase class-V
AL552_02095	PF00202	Aminotransferase class-III
AL552_02100	PF13419	Haloacid dehalogenase-like hydrolase
AL552_02105	PF00356	Bacterial regulatory proteins, lacI family
AL552_02105	PF13377	Periplasmic binding protein-like domain
AL552_02110	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL552_02115	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL552_02120	PF03611	AL552_02120
AL552_02130	PF00082	Subtilase family
AL552_02130	PF01483	Proprotein convertase P-domain
AL552_02130	PF02225	PA domain
AL552_02135	PF00657	GDSL-like Lipase/Acylhydrolase
AL552_02140	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
AL552_02145	PF00194	Eukaryotic-type carbonic anhydrase
AL552_02150	PF09695	AL552_02150
AL552_02160	PF00293	NUDIX domain
AL552_02165	PF13419	Haloacid dehalogenase-like hydrolase
AL552_02170	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_02170	PF03466	LysR substrate binding domain
AL552_02180	PF08279	HTH domain
AL552_02180	PF13280	AL552_02180
AL552_02205	PF12464	Maltose acetyltransferase
AL552_02205	PF14602	Hexapeptide repeat of succinyl-transferase
AL552_02210	PF02566	OsmC-like protein
AL552_02215	PF01625	Peptide methionine sulfoxide reductase
AL552_02215	PF01641	SelR domain
AL552_02220	PF10013	AL552_02220
AL552_02225	PF00106	short chain dehydrogenase
AL552_02230	PF04244	Deoxyribodipyrimidine photo-lyase-related protein
AL552_02235	PF00875	DNA photolyase
AL552_02235	PF03441	FAD binding domain of DNA photolyase
AL552_02240	PF00990	GGDEF domain
AL552_02250	PF01381	Helix-turn-helix
AL552_02250	PF06114	Domain of unknown function (DUF955)
AL552_02250	PF12268	AL552_02250
AL552_02255	PF00990	GGDEF domain
AL552_02255	PF03924	CHASE domain
AL552_02260	PF13532	2OG-Fe(II) oxygenase superfamily
AL552_02265	PF12060	AL552_02265
AL552_02270	PF01773	Na+ dependent nucleoside transporter N-terminus
AL552_02270	PF07662	Na+ dependent nucleoside transporter C-terminus
AL552_02270	PF07670	Nucleoside recognition
AL552_02285	PF11140	AL552_02285
AL552_02290	PF01212	Beta-eliminating lyase
AL552_02295	PF03116	AL552_02295
AL552_02300	PF01654	AL552_02300
AL552_02305	PF02322	AL552_02305
AL552_02310	PF10617	AL552_02310
AL552_02320	PF01266	FAD dependent oxidoreductase
AL552_02325	PF06808	AL552_02325
AL552_02330	PF16868	AL552_02330
AL552_02340	PF05525	AL552_02340
AL552_02345	PF00990	GGDEF domain
AL552_02355	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_02355	PF13426	PAS domain
AL552_02360	PF13729	AL552_02360
AL552_02365	PF00232	Glycosyl hydrolase family 1
AL552_02370	PF05787	Bacterial protein of unknown function (DUF839)
AL552_02375	PF04320	AL552_02375
AL552_02380	PF02311	AraC-like ligand binding domain
AL552_02380	PF12833	Helix-turn-helix domain
AL552_02390	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_02390	PF03466	LysR substrate binding domain
AL552_02395	PF08443	RimK-like ATP-grasp domain
AL552_02400	PF05618	Putative ATP-dependant zinc protease
AL552_02405	PF00753	Metallo-beta-lactamase superfamily
AL552_02410	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AL552_02415	PF00491	Arginase family
AL552_02420	PF07690	Major Facilitator Superfamily
AL552_02425	PF00326	Prolyl oligopeptidase family
AL552_02425	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
AL552_02440	PF00950	AL552_02440
AL552_02445	PF00005	ABC transporter
AL552_02465	PF10670	AL552_02465
AL552_02470	PF10029	AL552_02470
AL552_02475	PF16357	AL552_02475
AL552_02490	PF03544	Gram-negative bacterial TonB protein C-terminal
AL552_02495	PF02472	Biopolymer transport protein ExbD/TolR
AL552_02500	PF01618	AL552_02500
AL552_02505	PF01618	AL552_02505
AL552_02510	PF11932	AL552_02510
AL552_02515	PF00593	TonB dependent receptor
AL552_02515	PF07715	TonB-dependent Receptor Plug Domain
AL552_02520	PF00512	His Kinase A (phospho-acceptor) domain
AL552_02520	PF00672	HAMP domain
AL552_02520	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_02520	PF16750	AL552_02520
AL552_02525	PF00072	Response regulator receiver domain
AL552_02525	PF00486	Transcriptional regulatory protein, C terminal
AL552_02530	PF00056	lactate/malate dehydrogenase, NAD binding domain
AL552_02530	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
AL552_02535	PF03009	Glycerophosphoryl diester phosphodiesterase family
AL552_02540	PF03734	L,D-transpeptidase catalytic domain
AL552_02545	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL552_02545	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL552_02550	PF10928	Protein of unknown function (DUF2810)
AL552_02600	PF11286	AL552_02600
AL552_02605	PF04013	Putative SAM-dependent RNA methyltransferase
AL552_02610	PF01523	Putative modulator of DNA gyrase
AL552_02615	PF01523	Putative modulator of DNA gyrase
AL552_02620	PF08543	Phosphomethylpyrimidine kinase
AL552_02625	PF00005	ABC transporter
AL552_02630	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_02635	PF09084	NMT1/THI5 like
AL552_02640	PF03070	TENA/THI-4/PQQC family
AL552_02645	PF02110	Hydroxyethylthiazole kinase family
AL552_02650	PF02581	Thiamine monophosphate synthase/TENI
AL552_02655	PF01569	PAP2 superfamily
AL552_02660	PF00384	Molybdopterin oxidoreductase
AL552_02660	PF01568	Molydopterin dinucleotide binding domain
AL552_02665	PF03264	NapC/NirT cytochrome c family, N-terminal region
AL552_02670	PF13302	Acetyltransferase (GNAT) domain
AL552_02675	PF13561	Enoyl-(Acyl carrier protein) reductase
AL552_02680	PF00583	Acetyltransferase (GNAT) family
AL552_02685	PF13419	Haloacid dehalogenase-like hydrolase
AL552_02690	PF00583	Acetyltransferase (GNAT) family
AL552_02705	PF00155	Aminotransferase class I and II
AL552_02705	PF00392	Bacterial regulatory proteins, gntR family
AL552_02710	PF02595	Glycerate kinase family
AL552_02715	PF02447	AL552_02715
AL552_02720	PF05651	AL552_02720
AL552_02720	PF13556	PucR C-terminal helix-turn-helix domain
AL552_02735	PF01432	Peptidase family M3
AL552_02740	PF06041	Bacterial protein of unknown function (DUF924)
AL552_02745	PF13419	Haloacid dehalogenase-like hydrolase
AL552_02750	PF13642	protein structure with unknown function
AL552_02755	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL552_02760	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_02760	PF03466	LysR substrate binding domain
AL552_02765	PF06742	Protein of unknown function (DUF1214)
AL552_02765	PF06863	Protein of unknown function (DUF1254)
AL552_02770	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_02770	PF03466	LysR substrate binding domain
AL552_02775	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL552_02780	PF01661	Macro domain
AL552_02795	PF12706	Beta-lactamase superfamily domain
AL552_02800	PF07073	Modulator of Rho-dependent transcription termination (ROF)
AL552_02805	PF07690	Major Facilitator Superfamily
AL552_02810	PF16576	AL552_02810
AL552_02815	PF03922	OmpW family
AL552_02820	PF00805	Pentapeptide repeats (8 copies)
AL552_02820	PF13599	Pentapeptide repeats (9 copies)
AL552_02825	PF07883	Cupin domain
AL552_02830	PF12710	haloacid dehalogenase-like hydrolase
AL552_02835	PF03067	Chitin binding domain
AL552_02840	PF01037	AsnC family
AL552_02840	PF13412	Winged helix-turn-helix DNA-binding
AL552_02845	PF01810	AL552_02845
AL552_02850	PF00326	Prolyl oligopeptidase family
AL552_02855	PF04954	Siderophore-interacting protein
AL552_02855	PF08021	Siderophore-interacting FAD-binding domain
AL552_02860	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_02860	PF03466	LysR substrate binding domain
AL552_02865	PF00797	N-acetyltransferase
AL552_02870	PF00107	Zinc-binding dehydrogenase
AL552_02870	PF08240	Alcohol dehydrogenase GroES-like domain
AL552_02875	PF00756	Putative esterase
AL552_02885	PF00990	GGDEF domain
AL552_02895	PF08282	haloacid dehalogenase-like hydrolase
AL552_02900	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_02900	PF03466	LysR substrate binding domain
AL552_02905	PF00753	Metallo-beta-lactamase superfamily
AL552_02910	PF01323	DSBA-like thioredoxin domain
AL552_02915	PF00849	RNA pseudouridylate synthase
AL552_02920	PF01554	MatE
AL552_02930	PF00990	GGDEF domain
AL552_02940	PF06865	Protein of unknown function (DUF1255)
AL552_02945	PF11012	AL552_02945
AL552_02950	PF00704	Glycosyl hydrolases family 18
AL552_02950	PF02839	Carbohydrate binding domain
AL552_02950	PF08329	Chitinase A, N-terminal domain
AL552_02955	PF08386	TAP-like protein
AL552_02955	PF12146	Putative lysophospholipase
AL552_02960	PF00440	Bacterial regulatory proteins, tetR family
AL552_02965	PF01757	AL552_02965
AL552_02970	PF03600	Citrate transporter
AL552_02975	PF04828	Glutathione-dependent formaldehyde-activating enzyme
AL552_02980	PF02588	AL552_02980
AL552_02990	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AL552_02990	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
AL552_02995	PF02805	Metal binding domain of Ada
AL552_02995	PF06029	AlkA N-terminal domain
AL552_02995	PF12833	Helix-turn-helix domain
AL552_03005	PF07681	AL552_03005
AL552_03010	PF02678	Pirin
AL552_03015	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_03015	PF03466	LysR substrate binding domain
AL552_03020	PF04219	AL552_03020
AL552_03025	PF11280	AL552_03025
AL552_03030	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
AL552_03040	PF03616	AL552_03040
AL552_03045	PF00392	Bacterial regulatory proteins, gntR family
AL552_03060	PF03616	AL552_03060
AL552_03070	PF14247	AL552_03070
AL552_03075	PF04134	AL552_03075
AL552_03080	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL552_03080	PF17200	AL552_03080
AL552_03085	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
AL552_03090	PF10026	AL552_03090
AL552_03095	PF00072	Response regulator receiver domain
AL552_03095	PF04397	LytTr DNA-binding domain
AL552_03100	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_03100	PF06580	AL552_03100
AL552_03110	PF17131	AL552_03110
AL552_03115	PF02687	AL552_03115
AL552_03115	PF12704	MacB-like periplasmic core domain
AL552_03120	PF00005	ABC transporter
AL552_03135	PF01098	AL552_03135
AL552_03140	PF01709	Transcriptional regulator
AL552_03145	PF11686	AL552_03145
AL552_03150	PF00072	Response regulator receiver domain
AL552_03150	PF00512	His Kinase A (phospho-acceptor) domain
AL552_03150	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_03150	PF17149	AL552_03150
AL552_03155	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL552_03160	PF00925	GTP cyclohydrolase II
AL552_03160	PF08719	Domain of unknown function (DUF1768)
AL552_03170	PF00005	ABC transporter
AL552_03175	PF00005	ABC transporter
AL552_03175	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL552_03185	PF11826	AL552_03185
AL552_03190	PF13614	AAA domain
AL552_03195	PF02195	ParB-like nuclease domain
AL552_03200	PF05127	Helicase
AL552_03200	PF08351	Domain of unknown function (DUF1726)
AL552_03200	PF13718	GNAT acetyltransferase 2
AL552_03205	PF03961	AL552_03205
AL552_03215	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_03215	PF03466	LysR substrate binding domain
AL552_03230	PF00367	phosphotransferase system, EIIB
AL552_03230	PF02378	Phosphotransferase system, EIIC
AL552_03235	PF13580	SIS domain
AL552_03245	PF01380	SIS domain
AL552_03245	PF01418	Helix-turn-helix domain, rpiR family
AL552_03250	PF00246	Zinc carboxypeptidase
AL552_03255	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL552_03260	PF03358	NADPH-dependent FMN reductase
AL552_03270	PF00924	Mechanosensitive ion channel
AL552_03275	PF00005	ABC transporter
AL552_03275	PF00664	ABC transporter transmembrane region
AL552_03275	PF03412	Peptidase C39 family
AL552_03280	PF00563	EAL domain
AL552_03280	PF00990	GGDEF domain
AL552_03280	PF16448	AL552_03280
AL552_03285	PF06035	Bacterial transglutaminase-like cysteine proteinase BTLCP
AL552_03290	PF13437	HlyD family secretion protein
AL552_03290	PF13533	Biotin-lipoyl like
AL552_03295	PF00072	Response regulator receiver domain
AL552_03295	PF02954	Bacterial regulatory protein, Fis family
AL552_03300	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_03300	PF02743	Cache domain
AL552_03305	PF01243	Pyridoxamine 5'-phosphate oxidase
AL552_03305	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
AL552_03310	PF00196	Bacterial regulatory proteins, luxR family
AL552_03310	PF08448	PAS fold
AL552_03315	PF12833	Helix-turn-helix domain
AL552_03320	PF00171	Aldehyde dehydrogenase family
AL552_03320	PF01619	Proline dehydrogenase
AL552_03320	PF14850	DNA-binding domain of Proline dehydrogenase
AL552_03330	PF00474	Sodium:solute symporter family
AL552_03335	PF13302	Acetyltransferase (GNAT) domain
AL552_03340	PF00076	RNA recognition motif
AL552_03345	PF13302	Acetyltransferase (GNAT) domain
AL552_03355	PF01037	AsnC family
AL552_03355	PF13412	Winged helix-turn-helix DNA-binding
AL552_03365	PF00005	ABC transporter
AL552_03365	PF00664	ABC transporter transmembrane region
AL552_03370	PF02274	Amidinotransferase
AL552_03375	PF06719	AL552_03375
AL552_03375	PF12833	Helix-turn-helix domain
AL552_03380	PF07883	Cupin domain
AL552_03390	PF02627	Carboxymuconolactone decarboxylase family
AL552_03395	PF07883	Cupin domain
AL552_03400	PF03473	MOSC domain
AL552_03400	PF03475	3-alpha domain
AL552_03405	PF12833	Helix-turn-helix domain
AL552_03410	PF08240	Alcohol dehydrogenase GroES-like domain
AL552_03410	PF13602	Zinc-binding dehydrogenase
AL552_03420	PF04542	Sigma-70 region 2
AL552_03420	PF08281	Sigma-70, region 4
AL552_03425	PF01965	DJ-1/PfpI family
AL552_03435	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_03435	PF03466	LysR substrate binding domain
AL552_03440	PF00188	Cysteine-rich secretory protein family
AL552_03445	PF13669	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL552_03455	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL552_03455	PF13192	Thioredoxin domain
AL552_03460	PF00578	AhpC/TSA family
AL552_03460	PF10417	C-terminal domain of 1-Cys peroxiredoxin
AL552_03465	PF01047	MarR family
AL552_03470	PF02566	OsmC-like protein
AL552_03475	PF06445	GyrI-like small molecule binding domain
AL552_03475	PF12833	Helix-turn-helix domain
AL552_03480	PF07143	Hydroxyneurosporene synthase (CrtC)
AL552_03480	PF17186	AL552_03480
AL552_03485	PF02687	AL552_03485
AL552_03490	PF00005	ABC transporter
AL552_03495	PF11730	AL552_03495
AL552_03505	PF13231	AL552_03505
AL552_03510	PF00535	Glycosyl transferase family 2
AL552_03520	PF13847	Methyltransferase domain
AL552_03525	PF01136	AL552_03525
AL552_03530	PF03625	Domain of unknown function DUF302
AL552_03535	PF00367	phosphotransferase system, EIIB
AL552_03535	PF02378	Phosphotransferase system, EIIC
AL552_03545	PF00072	Response regulator receiver domain
AL552_03545	PF00486	Transcriptional regulatory protein, C terminal
AL552_03550	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_03555	PF13416	Bacterial extracellular solute-binding protein
AL552_03560	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
AL552_03560	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AL552_03565	PF04183	IucA / IucC family
AL552_03565	PF06276	Ferric iron reductase FhuF-like transporter
AL552_03570	PF07690	Major Facilitator Superfamily
AL552_03575	PF04183	IucA / IucC family
AL552_03575	PF06276	Ferric iron reductase FhuF-like transporter
AL552_03585	PF00593	TonB dependent receptor
AL552_03585	PF07715	TonB-dependent Receptor Plug Domain
AL552_03590	PF00593	TonB dependent receptor
AL552_03590	PF07715	TonB-dependent Receptor Plug Domain
AL552_03595	PF01497	Periplasmic binding protein
AL552_03600	PF01032	FecCD transport family
AL552_03605	PF01032	FecCD transport family
AL552_03610	PF00005	ABC transporter
AL552_03620	PF00675	Insulinase (Peptidase family M16)
AL552_03620	PF05193	Peptidase M16 inactive domain
AL552_03625	PF04519	AL552_03625
AL552_03630	PF01551	Peptidase family M23
AL552_03640	PF13620	Carboxypeptidase regulatory-like domain
AL552_03645	PF13127	AL552_03645
AL552_03650	PF01852	START domain
AL552_03655	PF07690	Major Facilitator Superfamily
AL552_03660	PF00239	Resolvase, N terminal domain
AL552_03660	PF13384	Homeodomain-like domain
AL552_03665	PF00356	Bacterial regulatory proteins, lacI family
AL552_03665	PF13377	Periplasmic binding protein-like domain
AL552_03675	PF12680	SnoaL-like domain
AL552_03680	PF07690	Major Facilitator Superfamily
AL552_03685	PF00474	Sodium:solute symporter family
AL552_03690	PF03313	AL552_03690
AL552_03690	PF03315	Serine dehydratase beta chain
AL552_03700	PF02264	LamB porin
AL552_03705	PF07148	AL552_03705
AL552_03715	PF00128	Alpha amylase, catalytic domain
AL552_03720	PF02018	Carbohydrate binding domain
AL552_03720	PF04231	Endonuclease I
AL552_03725	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AL552_03725	PF03714	Bacterial pullanase-associated domain
AL552_03725	PF11852	Domain of unknown function (DUF3372)
AL552_03730	PF08238	Sel1 repeat
AL552_03740	PF01276	Orn/Lys/Arg decarboxylase, major domain
AL552_03740	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
AL552_03740	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
AL552_03745	PF13520	Amino acid permease
AL552_03750	PF04014	Antidote-toxin recognition MazE
AL552_03755	PF08543	Phosphomethylpyrimidine kinase
AL552_03760	PF00375	Sodium:dicarboxylate symporter family
AL552_03765	PF03193	Protein of unknown function, DUF258
AL552_03770	PF00367	phosphotransferase system, EIIB
AL552_03775	PF02630	SCO1/SenC
AL552_03785	PF04018	AL552_03785
AL552_03790	PF00196	Bacterial regulatory proteins, luxR family
AL552_03800	PF00343	Carbohydrate phosphorylase
AL552_03805	PF02446	4-alpha-glucanotransferase
AL552_03810	PF00128	Alpha amylase, catalytic domain
AL552_03810	PF02806	Alpha amylase, C-terminal all-beta domain
AL552_03810	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AL552_03815	PF00912	Transglycosylase
AL552_03820	PF00128	Alpha amylase, catalytic domain
AL552_03825	PF13462	Thioredoxin
AL552_03835	PF07670	Nucleoside recognition
AL552_03840	PF07670	Nucleoside recognition
AL552_03845	PF01546	Peptidase family M20/M25/M40
AL552_03845	PF07687	Peptidase dimerisation domain
AL552_03850	PF06803	AL552_03850
AL552_03855	PF00375	Sodium:dicarboxylate symporter family
AL552_03860	PF08874	AL552_03860
AL552_03865	PF02706	Chain length determinant protein
AL552_03865	PF13614	AAA domain
AL552_03865	PF13807	AL552_03865
AL552_03870	PF01451	Low molecular weight phosphotyrosine protein phosphatase
AL552_03875	PF02563	Polysaccharide biosynthesis/export protein
AL552_03875	PF10531	SLBB domain
AL552_03885	PF00881	Nitroreductase family
AL552_03890	PF01914	AL552_03890
AL552_03895	PF01734	Patatin-like phospholipase
AL552_03900	PF03067	Chitin binding domain
AL552_03905	PF02469	Fasciclin domain
AL552_03910	PF00875	DNA photolyase
AL552_03910	PF03441	FAD binding domain of DNA photolyase
AL552_03920	PF00581	Rhodanese-like domain
AL552_03925	PF00583	Acetyltransferase (GNAT) family
AL552_03930	PF00561	alpha/beta hydrolase fold
AL552_03935	PF00768	D-alanyl-D-alanine carboxypeptidase
AL552_03935	PF07943	Penicillin-binding protein 5, C-terminal domain
AL552_03940	PF00128	Alpha amylase, catalytic domain
AL552_03940	PF09985	Domain of unknown function (DUF2223)
AL552_03945	PF12833	Helix-turn-helix domain
AL552_03950	PF00881	Nitroreductase family
AL552_03955	PF03992	Antibiotic biosynthesis monooxygenase
AL552_03960	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_03960	PF03466	LysR substrate binding domain
AL552_03965	PF09905	Uncharacterized conserved protein (DUF2132)
AL552_03970	PF13279	Thioesterase-like superfamily
AL552_03975	PF00175	Oxidoreductase NAD-binding domain
AL552_03975	PF00970	Oxidoreductase FAD-binding domain
AL552_03980	PF09829	AL552_03980
AL552_03985	PF01594	AL552_03985
AL552_03990	PF07885	Ion channel
AL552_03995	PF16576	AL552_03995
AL552_04000	PF07869	AL552_04000
AL552_04010	PF04632	AL552_04010
AL552_04020	PF00892	EamA-like transporter family
AL552_04025	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_04025	PF03466	LysR substrate binding domain
AL552_04030	PF07690	Major Facilitator Superfamily
AL552_04035	PF00583	Acetyltransferase (GNAT) family
AL552_04040	PF00583	Acetyltransferase (GNAT) family
AL552_04045	PF10973	AL552_04045
AL552_04050	PF00923	Transaldolase
AL552_04055	PF04055	Radical SAM superfamily
AL552_04055	PF13353	4Fe-4S single cluster domain
AL552_04060	PF01228	Glycine radical
AL552_04060	PF02901	Pyruvate formate lyase
AL552_04065	PF03435	Saccharopine dehydrogenase
AL552_04070	PF01370	NAD dependent epimerase/dehydratase family
AL552_04080	PF00376	MerR family regulatory protein
AL552_04080	PF09278	MerR, DNA binding
AL552_04085	PF00440	Bacterial regulatory proteins, tetR family
AL552_04090	PF04982	AL552_04090
AL552_04095	PF09493	AL552_04095
AL552_04100	PF08000	Bacterial PH domain
AL552_04115	PF00691	OmpA family
AL552_04115	PF13677	AL552_04115
AL552_04120	PF01618	AL552_04120
AL552_04125	PF04542	Sigma-70 region 2
AL552_04125	PF04545	Sigma-70, region 4
AL552_04130	PF03748	AL552_04130
AL552_04135	PF02120	Flagellar hook-length control protein FliK
AL552_04145	PF02561	Flagellar protein FliS
AL552_04150	PF02465	AL552_04150
AL552_04150	PF07195	AL552_04150
AL552_04150	PF07196	Flagellin hook IN motif
AL552_04160	PF00669	Bacterial flagellin N-terminal helical region
AL552_04160	PF00700	Bacterial flagellin C-terminal helical region
AL552_04165	PF00563	EAL domain
AL552_04170	PF00771	FHIPEP family
AL552_04175	PF01312	FlhB HrpN YscU SpaS Family
AL552_04180	PF01311	AL552_04180
AL552_04185	PF01313	AL552_04185
AL552_04190	PF00813	AL552_04190
AL552_04195	PF01052	Surface presentation of antigens (SPOA)
AL552_04200	PF01052	Surface presentation of antigens (SPOA)
AL552_04205	PF00691	OmpA family
AL552_04210	PF00158	Sigma-54 interaction domain
AL552_04210	PF02954	Bacterial regulatory protein, Fis family
AL552_04215	PF02049	AL552_04215
AL552_04220	PF01514	Secretory protein of YscJ/FliF family
AL552_04220	PF08345	AL552_04220
AL552_04225	PF01706	FliG C-terminal domain
AL552_04225	PF14841	FliG middle domain
AL552_04225	PF14842	FliG N-terminal domain
AL552_04230	PF02108	AL552_04230
AL552_04245	PF00089	Trypsin
AL552_04250	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_04250	PF03466	LysR substrate binding domain
AL552_04255	PF00892	EamA-like transporter family
AL552_04260	PF08327	Activator of Hsp90 ATPase homolog 1-like protein
AL552_04270	PF07361	Cytochrome b562
AL552_04280	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL552_04285	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_04285	PF03466	LysR substrate binding domain
AL552_04295	PF06468	Spondin_N
AL552_04300	PF06468	Spondin_N
AL552_04305	PF00072	Response regulator receiver domain
AL552_04305	PF00486	Transcriptional regulatory protein, C terminal
AL552_04310	PF00512	His Kinase A (phospho-acceptor) domain
AL552_04315	PF00080	Copper/zinc superoxide dismutase (SODC)
AL552_04320	PF00266	Aminotransferase class-V
AL552_04325	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL552_04330	PF00563	EAL domain
AL552_04330	PF00990	GGDEF domain
AL552_04335	PF00155	Aminotransferase class I and II
AL552_04340	PF00107	Zinc-binding dehydrogenase
AL552_04340	PF08240	Alcohol dehydrogenase GroES-like domain
AL552_04345	PF00194	Eukaryotic-type carbonic anhydrase
AL552_04350	PF00924	Mechanosensitive ion channel
AL552_04360	PF01070	FMN-dependent dehydrogenase
AL552_04365	PF02652	AL552_04365
AL552_04370	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_04370	PF03466	LysR substrate binding domain
AL552_04375	PF00326	Prolyl oligopeptidase family
AL552_04375	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
AL552_04380	PF00005	ABC transporter
AL552_04380	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL552_04400	PF13609	Gram-negative porin
AL552_04405	PF07238	PilZ domain
AL552_04405	PF12945	Flagellar protein YcgR
AL552_04410	PF14542	GCN5-related N-acetyl-transferase
AL552_04415	PF02958	Ecdysteroid kinase
AL552_04420	PF00583	Acetyltransferase (GNAT) family
AL552_04425	PF12800	4Fe-4S binding domain
AL552_04425	PF12838	4Fe-4S dicluster domain
AL552_04430	PF12801	AL552_04430
AL552_04430	PF13187	4Fe-4S dicluster domain
AL552_04435	PF07690	Major Facilitator Superfamily
AL552_04440	PF14145	AL552_04440
AL552_04445	PF02361	Cobalt transport protein
AL552_04450	PF00005	ABC transporter
AL552_04450	PF12558	AL552_04450
AL552_04455	PF07155	ECF-type riboflavin transporter, S component
AL552_04460	PF13533	Biotin-lipoyl like
AL552_04465	PF11742	AL552_04465
AL552_04470	PF00990	GGDEF domain
AL552_04485	PF01048	Phosphorylase superfamily
AL552_04495	PF04463	AL552_04495
AL552_04495	PF08349	AL552_04495
AL552_04500	PF13411	MerR HTH family regulatory protein
AL552_04505	PF00875	DNA photolyase
AL552_04505	PF03441	FAD binding domain of DNA photolyase
AL552_04510	PF01476	LysM domain
AL552_04510	PF03734	L,D-transpeptidase catalytic domain
AL552_04515	PF04728	Lipoprotein leucine-zipper
AL552_04520	PF00270	DEAD/DEAH box helicase
AL552_04520	PF00271	Helicase conserved C-terminal domain
AL552_04525	PF00326	Prolyl oligopeptidase family
AL552_04525	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
AL552_04530	PF00593	TonB dependent receptor
AL552_04530	PF07715	TonB-dependent Receptor Plug Domain
AL552_04535	PF01483	Proprotein convertase P-domain
AL552_04540	PF07603	AL552_04540
AL552_04545	PF07603	AL552_04545
AL552_04550	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL552_04550	PF00672	HAMP domain
AL552_04555	PF12849	PBP superfamily domain
AL552_04560	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_04565	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_04570	PF00005	ABC transporter
AL552_04575	PF00990	GGDEF domain
AL552_04580	PF13584	AL552_04580
AL552_04585	PF07719	Tetratricopeptide repeat
AL552_04585	PF13519	von Willebrand factor type A domain
AL552_04590	PF00092	von Willebrand factor type A domain
AL552_04595	PF14316	AL552_04595
AL552_04600	PF01882	AL552_04600
AL552_04605	PF07726	ATPase family associated with various cellular activities (AAA)
AL552_04615	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL552_04615	PF00672	HAMP domain
AL552_04630	PF00196	Bacterial regulatory proteins, luxR family
AL552_04635	PF00353	Hemolysin-type calcium-binding repeat (2 copies)
AL552_04640	PF00005	ABC transporter
AL552_04650	PF00924	Mechanosensitive ion channel
AL552_04655	PF01032	FecCD transport family
AL552_04660	PF01497	Periplasmic binding protein
AL552_04665	PF00005	ABC transporter
AL552_04670	PF00593	TonB dependent receptor
AL552_04670	PF07715	TonB-dependent Receptor Plug Domain
AL552_04675	PF00005	ABC transporter
AL552_04675	PF00664	ABC transporter transmembrane region
AL552_04690	PF02321	Outer membrane efflux protein
AL552_04695	PF00873	AcrB/AcrD/AcrF family
AL552_04700	PF16576	AL552_04700
AL552_04705	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_04705	PF03466	LysR substrate binding domain
AL552_04715	PF00579	tRNA synthetases class I (W and Y)
AL552_04720	PF00196	Bacterial regulatory proteins, luxR family
AL552_04730	PF00391	PEP-utilising enzyme, mobile domain
AL552_04730	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
AL552_04730	PF02896	PEP-utilising enzyme, TIM barrel domain
AL552_04735	PF03618	AL552_04735
AL552_04740	PF00710	Asparaginase
AL552_04745	PF00709	Adenylosuccinate synthetase
AL552_04750	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_04750	PF03466	LysR substrate binding domain
AL552_04755	PF12614	AL552_04755
AL552_04760	PF01810	AL552_04760
AL552_04765	PF09831	AL552_04765
AL552_04775	PF02423	Ornithine cyclodeaminase/mu-crystallin family
AL552_04780	PF00291	Pyridoxal-phosphate dependent enzyme
AL552_04785	PF00202	Aminotransferase class-III
AL552_04790	PF00171	Aldehyde dehydrogenase family
AL552_04795	PF01037	AsnC family
AL552_04795	PF13412	Winged helix-turn-helix DNA-binding
AL552_04800	PF03480	Bacterial extracellular solute-binding protein, family 7
AL552_04810	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AL552_04820	PF00155	Aminotransferase class I and II
AL552_04820	PF00392	Bacterial regulatory proteins, gntR family
AL552_04825	PF04290	AL552_04825
AL552_04830	PF06808	AL552_04830
AL552_04835	PF12625	AL552_04835
AL552_04835	PF12833	Helix-turn-helix domain
AL552_04840	PF13561	Enoyl-(Acyl carrier protein) reductase
AL552_04845	PF12973	ChrR Cupin-like domain
AL552_04850	PF00107	Zinc-binding dehydrogenase
AL552_04850	PF08240	Alcohol dehydrogenase GroES-like domain
AL552_04855	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AL552_04860	PF04399	Glutaredoxin 2, C terminal domain
AL552_04860	PF13417	Glutathione S-transferase, N-terminal domain
AL552_04865	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_04865	PF03466	LysR substrate binding domain
AL552_04870	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_04870	PF03466	LysR substrate binding domain
AL552_04875	PF17389	AL552_04875
AL552_04880	PF00270	DEAD/DEAH box helicase
AL552_04880	PF00271	Helicase conserved C-terminal domain
AL552_04885	PF00990	GGDEF domain
AL552_04890	PF13641	Glycosyltransferase like family 2
AL552_04895	PF13437	HlyD family secretion protein
AL552_04905	PF13698	AL552_04905
AL552_04920	PF00155	Aminotransferase class I and II
AL552_04925	PF06445	GyrI-like small molecule binding domain
AL552_04925	PF12833	Helix-turn-helix domain
AL552_04930	PF14321	AL552_04930
AL552_04935	PF04325	Protein of unknown function (DUF465)
AL552_04940	PF12973	ChrR Cupin-like domain
AL552_04950	PF01297	Periplasmic solute binding protein family
AL552_04955	PF00950	AL552_04955
AL552_04960	PF13561	Enoyl-(Acyl carrier protein) reductase
AL552_04965	PF14412	AL552_04965
AL552_04975	PF02264	LamB porin
AL552_04975	PF11471	AL552_04975
AL552_04980	PF00356	Bacterial regulatory proteins, lacI family
AL552_04980	PF13377	Periplasmic binding protein-like domain
AL552_04985	PF00367	phosphotransferase system, EIIB
AL552_04985	PF02378	Phosphotransferase system, EIIC
AL552_04990	PF00294	pfkB family carbohydrate kinase
AL552_04995	PF00251	Glycosyl hydrolases family 32 N-terminal domain
AL552_04995	PF08244	Glycosyl hydrolases family 32 C terminal
AL552_05005	PF02798	Glutathione S-transferase, N-terminal domain
AL552_05005	PF13410	Glutathione S-transferase, C-terminal domain
AL552_05015	PF00768	D-alanyl-D-alanine carboxypeptidase
AL552_05015	PF07943	Penicillin-binding protein 5, C-terminal domain
AL552_05020	PF05036	Sporulation related domain
AL552_05025	PF08534	Redoxin
AL552_05030	PF00962	Adenosine/AMP deaminase
AL552_05045	PF00313	'Cold-shock' DNA-binding domain
AL552_05050	PF02678	Pirin
AL552_05050	PF05726	Pirin C-terminal cupin domain
AL552_05055	PF01734	Patatin-like phospholipase
AL552_05065	PF03733	AL552_05065
AL552_05070	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL552_05080	PF01219	Prokaryotic diacylglycerol kinase
AL552_05090	PF00512	His Kinase A (phospho-acceptor) domain
AL552_05090	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_05095	PF00072	Response regulator receiver domain
AL552_05095	PF00486	Transcriptional regulatory protein, C terminal
AL552_05110	PF01323	DSBA-like thioredoxin domain
AL552_05120	PF11911	AL552_05120
AL552_05125	PF00255	Glutathione peroxidase
AL552_05130	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
AL552_05140	PF01553	Acyltransferase
AL552_05140	PF07690	Major Facilitator Superfamily
AL552_05150	PF13443	Cro/C1-type HTH DNA-binding domain
AL552_05155	PF01966	HD domain
AL552_05160	PF07969	Amidohydrolase family
AL552_05165	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
AL552_05170	PF01769	Divalent cation transporter
AL552_05170	PF03448	MgtE intracellular N domain
AL552_05175	PF03109	AL552_05175
AL552_05180	PF13533	Biotin-lipoyl like
AL552_05190	PF12625	AL552_05190
AL552_05190	PF12833	Helix-turn-helix domain
AL552_05205	PF00072	Response regulator receiver domain
AL552_05205	PF00486	Transcriptional regulatory protein, C terminal
AL552_05210	PF00512	His Kinase A (phospho-acceptor) domain
AL552_05210	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_05215	PF12900	Pyridoxamine 5'-phosphate oxidase
AL552_05220	PF00155	Aminotransferase class I and II
AL552_05220	PF00392	Bacterial regulatory proteins, gntR family
AL552_05225	PF13520	Amino acid permease
AL552_05235	PF01037	AsnC family
AL552_05235	PF13404	AsnC-type helix-turn-helix domain
AL552_05245	PF01810	AL552_05245
AL552_05260	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL552_05260	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AL552_05265	PF00072	Response regulator receiver domain
AL552_05265	PF00512	His Kinase A (phospho-acceptor) domain
AL552_05265	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_05275	PF04363	AL552_05275
AL552_05290	PF01541	GIY-YIG catalytic domain
AL552_05300	PF13407	Periplasmic binding protein domain
AL552_05305	PF00072	Response regulator receiver domain
AL552_05305	PF00512	His Kinase A (phospho-acceptor) domain
AL552_05305	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_05305	PF09308	LuxQ, periplasmic
AL552_05310	PF13463	Winged helix DNA-binding domain
AL552_05315	PF13437	HlyD family secretion protein
AL552_05315	PF13533	Biotin-lipoyl like
AL552_05320	PF11168	AL552_05320
AL552_05325	PF07238	PilZ domain
AL552_05325	PF12945	Flagellar protein YcgR
AL552_05330	PF00892	EamA-like transporter family
AL552_05335	PF01037	AsnC family
AL552_05335	PF13412	Winged helix-turn-helix DNA-binding
AL552_05340	PF13649	Methyltransferase domain
AL552_05355	PF08239	Bacterial SH3 domain
AL552_05365	PF02355	Protein export membrane protein
AL552_05365	PF07549	SecD/SecF GG Motif
AL552_05365	PF13721	SecD export protein N-terminal TM region
AL552_05380	PF01810	AL552_05380
AL552_05390	PF13561	Enoyl-(Acyl carrier protein) reductase
AL552_05395	PF00108	Thiolase, N-terminal domain
AL552_05395	PF02803	Thiolase, C-terminal domain
AL552_05400	PF09361	AL552_05400
AL552_05405	PF07167	AL552_05405
AL552_05410	PF09574	AL552_05410
AL552_05415	PF03264	NapC/NirT cytochrome c family, N-terminal region
AL552_05420	PF03892	Nitrate reductase cytochrome c-type subunit (NapB)
AL552_05425	PF00384	Molybdopterin oxidoreductase
AL552_05425	PF01568	Molydopterin dinucleotide binding domain
AL552_05425	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL552_05430	PF03927	NapD protein
AL552_05435	PF12838	4Fe-4S dicluster domain
AL552_05440	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_05440	PF07730	Histidine kinase
AL552_05440	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
AL552_05445	PF00072	Response regulator receiver domain
AL552_05445	PF00196	Bacterial regulatory proteins, luxR family
AL552_05465	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AL552_05475	PF00873	AcrB/AcrD/AcrF family
AL552_05480	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL552_05485	PF00472	RF-1 domain
AL552_05490	PF13419	Haloacid dehalogenase-like hydrolase
AL552_05495	PF00691	OmpA family
AL552_05495	PF13505	Outer membrane protein beta-barrel domain
AL552_05505	PF00793	DAHP synthetase I family
AL552_05510	PF07690	Major Facilitator Superfamily
AL552_05515	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL552_05515	PF08447	PAS fold
AL552_05520	PF00456	Transketolase, thiamine diphosphate binding domain
AL552_05520	PF02779	Transketolase, pyrimidine binding domain
AL552_05520	PF02780	Transketolase, C-terminal domain
AL552_05525	PF00923	Transaldolase
AL552_05540	PF04198	Putative sugar-binding domain
AL552_05545	PF00704	Glycosyl hydrolases family 18
AL552_05550	PF00563	EAL domain
AL552_05550	PF00990	GGDEF domain
AL552_05550	PF02743	Cache domain
AL552_05555	PF00581	Rhodanese-like domain
AL552_05575	PF00899	ThiF family
AL552_05580	PF00994	Probable molybdopterin binding domain
AL552_05580	PF03453	MoeA N-terminal region (domain I and II)
AL552_05580	PF03454	MoeA C-terminal region (domain IV)
AL552_05585	PF01227	GTP cyclohydrolase I
AL552_05590	PF01566	AL552_05590
AL552_05595	PF03595	Voltage-dependent anion channel
AL552_05600	PF00654	Voltage gated chloride channel
AL552_05615	PF00248	Aldo/keto reductase family
AL552_05620	PF00072	Response regulator receiver domain
AL552_05625	PF00989	PAS fold
AL552_05630	PF01256	Carbohydrate kinase
AL552_05630	PF03853	YjeF-related protein N-terminus
AL552_05635	PF00478	IMP dehydrogenase / GMP reductase domain
AL552_05640	PF02275	Linear amide C-N hydrolases, choloylglycine hydrolase family
AL552_05650	PF01565	FAD binding domain
AL552_05655	PF08896	AL552_05655
AL552_05660	PF13191	AAA ATPase domain
AL552_05670	PF00551	Formyl transferase
AL552_05670	PF02911	Formyl transferase, C-terminal domain
AL552_05675	PF07484	Phage Tail Collar Domain
AL552_05685	PF00155	Aminotransferase class I and II
AL552_05685	PF00392	Bacterial regulatory proteins, gntR family
AL552_05690	PF00144	Beta-lactamase
AL552_05700	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL552_05710	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_05710	PF03466	LysR substrate binding domain
AL552_05725	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
AL552_05730	PF07690	Major Facilitator Superfamily
AL552_05735	PF02311	AraC-like ligand binding domain
AL552_05735	PF12833	Helix-turn-helix domain
AL552_05750	PF00582	Universal stress protein family
AL552_05760	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
AL552_05760	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
AL552_05760	PF04039	AL552_05760
AL552_05760	PF13244	AL552_05760
AL552_05765	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
AL552_05770	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
AL552_05775	PF01899	AL552_05775
AL552_05780	PF04066	AL552_05780
AL552_05785	PF03334	AL552_05785
AL552_05790	PF00392	Bacterial regulatory proteins, gntR family
AL552_05790	PF07702	UTRA domain
AL552_05795	PF02056	Family 4 glycosyl hydrolase
AL552_05795	PF11975	Family 4 glycosyl hydrolase C-terminal domain
AL552_05800	PF00367	phosphotransferase system, EIIB
AL552_05800	PF02378	Phosphotransferase system, EIIC
AL552_05805	PF00501	AMP-binding enzyme
AL552_05810	PF00766	Electron transfer flavoprotein FAD-binding domain
AL552_05810	PF01012	Electron transfer flavoprotein domain
AL552_05815	PF01012	Electron transfer flavoprotein domain
AL552_05820	PF05187	Electron transfer flavoprotein-ubiquinone oxidoreductase
AL552_05820	PF13450	NAD(P)-binding Rossmann-like domain
AL552_05830	PF00005	ABC transporter
AL552_05830	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL552_05835	PF00501	AMP-binding enzyme
AL552_05840	PF02653	AL552_05840
AL552_05845	PF02653	AL552_05845
AL552_05850	PF13458	Periplasmic binding protein
AL552_05855	PF00005	ABC transporter
AL552_05860	PF00501	AMP-binding enzyme
AL552_05865	PF05724	Thiopurine S-methyltransferase (TPMT)
AL552_05885	PF05724	Thiopurine S-methyltransferase (TPMT)
AL552_05890	PF02028	BCCT family transporter
AL552_05895	PF13561	Enoyl-(Acyl carrier protein) reductase
AL552_05900	PF00205	Thiamine pyrophosphate enzyme, central domain
AL552_05900	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL552_05900	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL552_05905	PF03306	Alpha-acetolactate decarboxylase
AL552_05910	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_05910	PF03466	LysR substrate binding domain
AL552_05915	PF13419	Haloacid dehalogenase-like hydrolase
AL552_05925	PF10617	AL552_05925
AL552_05930	PF02322	AL552_05930
AL552_05935	PF01654	AL552_05935
AL552_05940	PF00155	Aminotransferase class I and II
AL552_05940	PF00392	Bacterial regulatory proteins, gntR family
AL552_05945	PF12464	Maltose acetyltransferase
AL552_05945	PF14602	Hexapeptide repeat of succinyl-transferase
AL552_05950	PF08895	AL552_05950
AL552_05955	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
AL552_05960	PF00072	Response regulator receiver domain
AL552_05960	PF00512	His Kinase A (phospho-acceptor) domain
AL552_05960	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_05960	PF13426	PAS domain
AL552_05965	PF00682	HMGL-like
AL552_05970	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
AL552_05970	PF00364	Biotin-requiring enzyme
AL552_05970	PF02785	Biotin carboxylase C-terminal domain
AL552_05970	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AL552_05975	PF00378	Enoyl-CoA hydratase/isomerase family
AL552_05980	PF01039	Carboxyl transferase domain
AL552_05985	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL552_05985	PF02770	Acyl-CoA dehydrogenase, middle domain
AL552_05985	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL552_05990	PF00376	MerR family regulatory protein
AL552_05990	PF09278	MerR, DNA binding
AL552_05995	PF00108	Thiolase, N-terminal domain
AL552_05995	PF02803	Thiolase, C-terminal domain
AL552_06000	PF00171	Aldehyde dehydrogenase family
AL552_06005	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL552_06005	PF02770	Acyl-CoA dehydrogenase, middle domain
AL552_06005	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL552_06010	PF00378	Enoyl-CoA hydratase/isomerase family
AL552_06015	PF16113	AL552_06015
AL552_06020	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL552_06020	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AL552_06025	PF13561	Enoyl-(Acyl carrier protein) reductase
AL552_06035	PF00440	Bacterial regulatory proteins, tetR family
AL552_06035	PF13977	Bacterial transcriptional repressor
AL552_06040	PF00171	Aldehyde dehydrogenase family
AL552_06045	PF00732	GMC oxidoreductase
AL552_06045	PF05199	GMC oxidoreductase
AL552_06050	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
AL552_06055	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_06060	PF00005	ABC transporter
AL552_06065	PF00881	Nitroreductase family
AL552_06075	PF01145	SPFH domain / Band 7 family
AL552_06080	PF01957	NfeD-like C-terminal, partner-binding
AL552_06085	PF00563	EAL domain
AL552_06085	PF00990	GGDEF domain
AL552_06085	PF05228	AL552_06085
AL552_06085	PF13426	PAS domain
AL552_06090	PF00034	Cytochrome c
AL552_06090	PF03150	Di-haem cytochrome c peroxidase
AL552_06100	PF02566	OsmC-like protein
AL552_06110	PF10974	AL552_06110
AL552_06115	PF04116	AL552_06115
AL552_06125	PF13590	Domain of unknown function (DUF4136)
AL552_06135	PF09335	AL552_06135
AL552_06150	PF13645	AL552_06150
AL552_06165	PF05025	RbsD / FucU transport protein family
AL552_06170	PF00005	ABC transporter
AL552_06175	PF02653	AL552_06175
AL552_06180	PF13407	Periplasmic binding protein domain
AL552_06185	PF00294	pfkB family carbohydrate kinase
AL552_06190	PF00356	Bacterial regulatory proteins, lacI family
AL552_06190	PF13377	Periplasmic binding protein-like domain
AL552_06200	PF04973	AL552_06200
AL552_06210	PF00027	Cyclic nucleotide-binding domain
AL552_06215	PF01497	Periplasmic binding protein
AL552_06220	PF01032	FecCD transport family
AL552_06225	PF01032	FecCD transport family
AL552_06230	PF00005	ABC transporter
AL552_06235	PF13411	MerR HTH family regulatory protein
AL552_06240	PF12833	Helix-turn-helix domain
AL552_06250	PF09981	Uncharacterized protein conserved in bacteria (DUF2218)
AL552_06255	PF10688	AL552_06255
AL552_06275	PF12805	AL552_06275
AL552_06275	PF13515	AL552_06275
AL552_06280	PF00580	UvrD/REP helicase N-terminal domain
AL552_06280	PF12462	AL552_06280
AL552_06280	PF13361	UvrD-like helicase C-terminal domain
AL552_06285	PF02142	MGS-like domain
AL552_06290	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AL552_06305	PF06934	AL552_06305
AL552_06310	PF00486	Transcriptional regulatory protein, C terminal
AL552_06315	PF00884	Sulfatase
AL552_06315	PF14707	C-terminal region of aryl-sulfatase
AL552_06320	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_06320	PF03466	LysR substrate binding domain
AL552_06325	PF00884	Sulfatase
AL552_06325	PF14707	C-terminal region of aryl-sulfatase
AL552_06330	PF04055	Radical SAM superfamily
AL552_06330	PF13186	Iron-sulfur cluster-binding domain
AL552_06330	PF13353	4Fe-4S single cluster domain
AL552_06335	PF07726	ATPase family associated with various cellular activities (AAA)
AL552_06340	PF01882	AL552_06340
AL552_06345	PF14316	AL552_06345
AL552_06350	PF00092	von Willebrand factor type A domain
AL552_06355	PF13519	von Willebrand factor type A domain
AL552_06360	PF13584	AL552_06360
AL552_06365	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AL552_06370	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_06370	PF03466	LysR substrate binding domain
AL552_06375	PF00781	Diacylglycerol kinase catalytic domain
AL552_06380	PF04076	Bacterial OB fold (BOF) protein
AL552_06385	PF13505	Outer membrane protein beta-barrel domain
AL552_06390	PF08774	VRR-NUC domain
AL552_06395	PF07690	Major Facilitator Superfamily
AL552_06405	PF01435	Peptidase family M48
AL552_06410	PF04011	LemA family
AL552_06415	PF03606	AL552_06415
AL552_06420	PF00487	AL552_06420
AL552_06430	PF13419	Haloacid dehalogenase-like hydrolase
AL552_06435	PF00072	Response regulator receiver domain
AL552_06435	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_06440	PF00155	Aminotransferase class I and II
AL552_06445	PF01926	50S ribosome-binding GTPase
AL552_06450	PF00072	Response regulator receiver domain
AL552_06450	PF00563	EAL domain
AL552_06455	PF00990	GGDEF domain
AL552_06460	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_06465	PF00072	Response regulator receiver domain
AL552_06465	PF00196	Bacterial regulatory proteins, luxR family
AL552_06470	PF00072	Response regulator receiver domain
AL552_06470	PF01584	CheW-like domain
AL552_06475	PF07963	Prokaryotic N-terminal methylation motif
AL552_06480	PF01925	AL552_06480
AL552_06485	PF00892	EamA-like transporter family
AL552_06490	PF01124	MAPEG family
AL552_06500	PF03372	Endonuclease/Exonuclease/phosphatase family
AL552_06510	PF01447	Thermolysin metallopeptidase, catalytic domain
AL552_06510	PF02868	Thermolysin metallopeptidase, alpha-helical domain
AL552_06510	PF03413	Peptidase propeptide and YPEB domain
AL552_06510	PF04151	Bacterial pre-peptidase C-terminal domain
AL552_06510	PF07504	Fungalysin/Thermolysin Propeptide Motif
AL552_06515	PF00893	Small Multidrug Resistance protein
AL552_06520	PF00892	EamA-like transporter family
AL552_06525	PF00293	NUDIX domain
AL552_06530	PF13302	Acetyltransferase (GNAT) domain
AL552_06535	PF00171	Aldehyde dehydrogenase family
AL552_06540	PF04073	Aminoacyl-tRNA editing domain
AL552_06545	PF01645	Conserved region in glutamate synthase
AL552_06545	PF09360	Iron-binding zinc finger CDGSH type
AL552_06550	PF00141	Peroxidase
AL552_06555	PF09722	AL552_06555
AL552_06560	PF08808	AL552_06560
AL552_06565	PF01757	AL552_06565
AL552_06570	PF03206	AL552_06570
AL552_06575	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AL552_06580	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL552_06590	PF03061	Thioesterase superfamily
AL552_06595	PF03819	MazG nucleotide pyrophosphohydrolase domain
AL552_06600	PF00582	Universal stress protein family
AL552_06605	PF01769	Divalent cation transporter
AL552_06605	PF03448	MgtE intracellular N domain
AL552_06610	PF13521	AAA domain
AL552_06620	PF11212	AL552_06620
AL552_06625	PF07119	AL552_06625
AL552_06635	PF01327	Polypeptide deformylase
AL552_06640	PF13411	MerR HTH family regulatory protein
AL552_06645	PF11158	AL552_06645
AL552_06650	PF02253	Phospholipase A1
AL552_06660	PF04307	AL552_06660
AL552_06670	PF00005	ABC transporter
AL552_06670	PF00664	ABC transporter transmembrane region
AL552_06675	PF00929	Exonuclease
AL552_06680	PF15575	AL552_06680
AL552_06685	PF16691	AL552_06685
AL552_06690	PF14317	AL552_06690
AL552_06700	PF02627	Carboxymuconolactone decarboxylase family
AL552_06710	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL552_06715	PF02347	Glycine cleavage system P-protein
AL552_06720	PF01597	Glycine cleavage H-protein
AL552_06725	PF00464	Serine hydroxymethyltransferase
AL552_06730	PF01381	Helix-turn-helix
AL552_06730	PF07883	Cupin domain
AL552_06735	PF01571	Aminomethyltransferase folate-binding domain
AL552_06735	PF08669	Glycine cleavage T-protein C-terminal barrel domain
AL552_06740	PF00440	Bacterial regulatory proteins, tetR family
AL552_06745	PF13437	HlyD family secretion protein
AL552_06745	PF13533	Biotin-lipoyl like
AL552_06750	PF13437	HlyD family secretion protein
AL552_06750	PF13533	Biotin-lipoyl like
AL552_06755	PF00873	AcrB/AcrD/AcrF family
AL552_06765	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL552_06765	PF02378	Phosphotransferase system, EIIC
AL552_06775	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL552_06775	PF00381	PTS HPr component phosphorylation site
AL552_06780	PF00356	Bacterial regulatory proteins, lacI family
AL552_06780	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AL552_06785	PF03372	Endonuclease/Exonuclease/phosphatase family
AL552_06790	PF13275	S4 domain
AL552_06795	PF00563	EAL domain
AL552_06800	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_06805	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL552_06810	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_06815	PF00005	ABC transporter
AL552_06820	PF00224	Pyruvate kinase, barrel domain
AL552_06820	PF02887	Pyruvate kinase, alpha/beta domain
AL552_06825	PF07690	Major Facilitator Superfamily
AL552_06830	PF13343	Bacterial extracellular solute-binding protein
AL552_06835	PF00512	His Kinase A (phospho-acceptor) domain
AL552_06835	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_06840	PF00072	Response regulator receiver domain
AL552_06840	PF02954	Bacterial regulatory protein, Fis family
AL552_06840	PF14532	Sigma-54 interaction domain
AL552_06845	PF07947	AL552_06845
AL552_06850	PF00465	Iron-containing alcohol dehydrogenase
AL552_06860	PF00704	Glycosyl hydrolases family 18
AL552_06860	PF06483	AL552_06860
AL552_06860	PF14600	Cellulose-binding domain
AL552_06865	PF00483	Nucleotidyl transferase
AL552_06870	PF01268	Formate--tetrahydrofolate ligase
AL552_06875	PF00294	pfkB family carbohydrate kinase
AL552_06880	PF05981	AL552_06880
AL552_06890	PF13419	Haloacid dehalogenase-like hydrolase
AL552_06900	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL552_06910	PF04336	AL552_06910
AL552_06915	PF00270	DEAD/DEAH box helicase
AL552_06915	PF00271	Helicase conserved C-terminal domain
AL552_06920	PF00563	EAL domain
AL552_06930	PF09932	AL552_06930
AL552_06935	PF01292	Prokaryotic cytochrome b561
AL552_06940	PF04264	YceI-like domain
AL552_06945	PF00571	CBS domain
AL552_06945	PF01226	Formate/nitrite transporter
AL552_06955	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_06955	PF03466	LysR substrate binding domain
AL552_06960	PF06496	AL552_06960
AL552_06965	PF11398	Protein of unknown function (DUF2813)
AL552_06970	PF00149	Calcineurin-like phosphoesterase
AL552_06970	PF02872	5'-nucleotidase, C-terminal domain
AL552_06975	PF03741	AL552_06975
AL552_06985	PF03831	PhnA protein
AL552_06985	PF08274	PhnA Zinc-Ribbon
AL552_06990	PF06004	Bacterial protein of unknown function (DUF903)
AL552_07000	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
AL552_07010	PF01435	Peptidase family M48
AL552_07015	PF03061	Thioesterase superfamily
AL552_07020	PF11869	AL552_07020
AL552_07025	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL552_07025	PF12793	AL552_07025
AL552_07035	PF03091	CutA1 divalent ion tolerance protein
AL552_07040	PF09997	AL552_07040
AL552_07045	PF03171	2OG-Fe(II) oxygenase superfamily
AL552_07045	PF14226	non-haem dioxygenase in morphine synthesis N-terminal
AL552_07050	PF00226	DnaJ domain
AL552_07050	PF12339	AL552_07050
AL552_07055	PF09818	Predicted ATPase of the ABC class
AL552_07060	PF00563	EAL domain
AL552_07060	PF00990	GGDEF domain
AL552_07060	PF13185	GAF domain
AL552_07065	PF07055	Enoyl reductase FAD binding domain
AL552_07065	PF12241	Trans-2-enoyl-CoA reductase catalytic region
AL552_07065	PF12242	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
AL552_07070	PF13472	GDSL-like Lipase/Acylhydrolase family
AL552_07075	PF00005	ABC transporter
AL552_07085	PF01266	FAD dependent oxidoreductase
AL552_07090	PF02626	Allophanate hydrolase subunit 2
AL552_07095	PF02682	Allophanate hydrolase subunit 1
AL552_07100	PF03746	LamB/YcsF family
AL552_07105	PF00672	HAMP domain
AL552_07105	PF00989	PAS fold
AL552_07105	PF00990	GGDEF domain
AL552_07105	PF17152	AL552_07105
AL552_07110	PF16363	AL552_07110
AL552_07120	PF00593	TonB dependent receptor
AL552_07120	PF07715	TonB-dependent Receptor Plug Domain
AL552_07125	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_07125	PF03466	LysR substrate binding domain
AL552_07130	PF00583	Acetyltransferase (GNAT) family
AL552_07130	PF13380	CoA binding domain
AL552_07130	PF13549	ATP-grasp domain
AL552_07130	PF13607	Succinyl-CoA ligase like flavodoxin domain
AL552_07140	PF05036	Sporulation related domain
AL552_07145	PF01820	D-ala D-ala ligase N-terminus
AL552_07145	PF07478	D-ala D-ala ligase C-terminus
AL552_07150	PF11782	AL552_07150
AL552_07155	PF01253	Translation initiation factor SUI1
AL552_07170	PF06950	AL552_07170
AL552_07190	PF10734	AL552_07190
AL552_07195	PF05707	Zonular occludens toxin (Zot)
AL552_07200	PF13304	AAA domain
AL552_07205	PF13707	AL552_07205
AL552_07230	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_07230	PF03466	LysR substrate binding domain
AL552_07240	PF00582	Universal stress protein family
AL552_07245	PF03701	AL552_07245
AL552_07250	PF13729	AL552_07250
AL552_07255	PF11060	AL552_07255
AL552_07260	PF00072	Response regulator receiver domain
AL552_07260	PF00486	Transcriptional regulatory protein, C terminal
AL552_07265	PF00512	His Kinase A (phospho-acceptor) domain
AL552_07265	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_07265	PF11884	Domain of unknown function (DUF3404)
AL552_07270	PF02233	NAD(P) transhydrogenase beta subunit
AL552_07275	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
AL552_07275	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
AL552_07275	PF12769	Domain of unknown function (DUF3814)
AL552_07280	PF10115	AL552_07280
AL552_07285	PF10719	AL552_07285
AL552_07290	PF00990	GGDEF domain
AL552_07295	PF11557	AL552_07295
AL552_07300	PF00072	Response regulator receiver domain
AL552_07300	PF00990	GGDEF domain
AL552_07305	PF11269	Protein of unknown function (DUF3069)
AL552_07310	PF00005	ABC transporter
AL552_07310	PF03459	TOBE domain
AL552_07315	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_07320	PF13531	Bacterial extracellular solute-binding protein
AL552_07325	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
AL552_07325	PF07685	CobB/CobQ-like glutamine amidotransferase domain
AL552_07340	PF05618	Putative ATP-dependant zinc protease
AL552_07345	PF00155	Aminotransferase class I and II
AL552_07350	PF02311	AraC-like ligand binding domain
AL552_07350	PF12833	Helix-turn-helix domain
AL552_07355	PF01554	MatE
AL552_07360	PF13353	4Fe-4S single cluster domain
AL552_07365	PF03477	ATP cone domain
AL552_07365	PF13597	Anaerobic ribonucleoside-triphosphate reductase
AL552_07370	PF03372	Endonuclease/Exonuclease/phosphatase family
AL552_07375	PF16576	AL552_07375
AL552_07380	PF00873	AcrB/AcrD/AcrF family
AL552_07390	PF04143	AL552_07390
AL552_07395	PF01022	Bacterial regulatory protein, arsR family
AL552_07400	PF11127	Protein of unknown function (DUF2892)
AL552_07405	PF00581	Rhodanese-like domain
AL552_07405	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL552_07405	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL552_07410	PF01177	Asp/Glu/Hydantoin racemase
AL552_07415	PF02567	Phenazine biosynthesis-like protein
AL552_07420	PF10517	AL552_07420
AL552_07425	PF00384	Molybdopterin oxidoreductase
AL552_07425	PF01568	Molydopterin dinucleotide binding domain
AL552_07435	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_07435	PF03466	LysR substrate binding domain
AL552_07440	PF02634	FdhD/NarQ family
AL552_07445	PF07690	Major Facilitator Superfamily
AL552_07450	PF00072	Response regulator receiver domain
AL552_07450	PF00196	Bacterial regulatory proteins, luxR family
AL552_07455	PF05231	AL552_07455
AL552_07455	PF07730	Histidine kinase
AL552_07460	PF07690	Major Facilitator Superfamily
AL552_07465	PF01238	Phosphomannose isomerase type I
AL552_07475	PF00368	Hydroxymethylglutaryl-coenzyme A reductase
AL552_07480	PF08811	AL552_07480
AL552_07485	PF07394	AL552_07485
AL552_07490	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
AL552_07490	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AL552_07495	PF00085	Thioredoxin
AL552_07500	PF07690	Major Facilitator Superfamily
AL552_07505	PF11756	AL552_07505
AL552_07510	PF13302	Acetyltransferase (GNAT) domain
AL552_07515	PF11661	AL552_07515
AL552_07520	PF00593	TonB dependent receptor
AL552_07520	PF07715	TonB-dependent Receptor Plug Domain
AL552_07525	PF11575	AL552_07525
AL552_07530	PF03605	AL552_07530
AL552_07535	PF01936	NYN domain
AL552_07540	PF13778	AL552_07540
AL552_07545	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AL552_07550	PF01226	Formate/nitrite transporter
AL552_07555	PF13806	Rieske-like [2Fe-2S] domain
AL552_07560	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AL552_07560	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AL552_07560	PF04324	BFD-like [2Fe-2S] binding domain
AL552_07560	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL552_07565	PF01272	Transcription elongation factor, GreA/GreB, C-term
AL552_07565	PF14760	Rnk N-terminus
AL552_07575	PF00990	GGDEF domain
AL552_07575	PF08447	PAS fold
AL552_07580	PF10633	NPCBM-associated, NEW3 domain of alpha-galactosidase
AL552_07580	PF13583	Metallo-peptidase family M12B Reprolysin-like
AL552_07595	PF05548	AL552_07595
AL552_07595	PF10633	NPCBM-associated, NEW3 domain of alpha-galactosidase
AL552_07615	PF05235	CHAD domain
AL552_07620	PF01764	Lipase (class 3)
AL552_07630	PF00128	Alpha amylase, catalytic domain
AL552_07645	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL552_07645	PF12729	AL552_07645
AL552_07650	PF00842	Alanine racemase, C-terminal domain
AL552_07650	PF01168	Alanine racemase, N-terminal domain
AL552_07655	PF03591	AL552_07655
AL552_07660	PF05437	AL552_07660
AL552_07665	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_07665	PF03466	LysR substrate binding domain
AL552_07670	PF01168	Alanine racemase, N-terminal domain
AL552_07670	PF14031	Putative serine dehydratase domain
AL552_07675	PF02423	Ornithine cyclodeaminase/mu-crystallin family
AL552_07680	PF00583	Acetyltransferase (GNAT) family
AL552_07685	PF01565	FAD binding domain
AL552_07685	PF09330	D-lactate dehydrogenase, membrane binding
AL552_07690	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_07690	PF03466	LysR substrate binding domain
AL552_07705	PF05762	VWA domain containing CoxE-like protein
AL552_07710	PF07728	AAA domain (dynein-related subfamily)
AL552_07710	PF12592	Protein of unknown function (DUF3763)
AL552_07715	PF00293	NUDIX domain
AL552_07720	PF01212	Beta-eliminating lyase
AL552_07725	PF00034	Cytochrome c
AL552_07730	PF03606	AL552_07730
AL552_07740	PF08212	Lipocalin-like domain
AL552_07745	PF00031	Cystatin domain
AL552_07750	PF13476	AAA domain
AL552_07750	PF13558	Putative exonuclease SbcCD, C subunit
AL552_07755	PF00149	Calcineurin-like phosphoesterase
AL552_07755	PF12320	Type 5 capsule protein repressor C-terminal domain
AL552_07765	PF05488	PAAR motif
AL552_07770	PF05954	Phage late control gene D protein (GPD)
AL552_07775	PF05638	Protein of unknown function (DUF796)
AL552_07780	PF00004	ATPase family associated with various cellular activities (AAA)
AL552_07780	PF07724	AAA domain (Cdc48 subfamily)
AL552_07780	PF10431	C-terminal, D2-small domain, of ClpB protein
AL552_07785	PF06996	AL552_07785
AL552_07790	PF05947	AL552_07790
AL552_07795	PF04965	Gene 25-like lysozyme
AL552_07800	PF07024	ImpE protein
AL552_07805	PF05943	AL552_07805
AL552_07810	PF05943	AL552_07810
AL552_07815	PF05591	AL552_07815
AL552_07820	PF06812	AL552_07820
AL552_07825	PF13672	Protein phosphatase 2C
AL552_07830	PF09867	Uncharacterized protein conserved in bacteria (DUF2094)
AL552_07835	PF06744	AL552_07835
AL552_07835	PF06761	AL552_07835
AL552_07835	PF14331	AL552_07835
AL552_07850	PF12790	Type VI secretion lipoprotein
AL552_07855	PF00498	FHA domain
AL552_07865	PF00069	Protein kinase domain
AL552_07880	PF13581	Histidine kinase-like ATPase domain
AL552_07885	PF00072	Response regulator receiver domain
AL552_07885	PF07228	Stage II sporulation protein E (SpoIIE)
AL552_07895	PF13410	Glutathione S-transferase, C-terminal domain
AL552_07895	PF13417	Glutathione S-transferase, N-terminal domain
AL552_07900	PF00440	Bacterial regulatory proteins, tetR family
AL552_07905	PF03479	Domain of unknown function (DUF296)
AL552_07910	PF13806	Rieske-like [2Fe-2S] domain
AL552_07915	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AL552_07915	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AL552_07915	PF04324	BFD-like [2Fe-2S] binding domain
AL552_07915	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL552_07920	PF00005	ABC transporter
AL552_07925	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_07930	PF13379	NMT1-like family
AL552_07940	PF03861	ANTAR domain
AL552_07945	PF01738	Dienelactone hydrolase family
AL552_07950	PF00591	Glycosyl transferase family, a/b domain
AL552_07950	PF02885	Glycosyl transferase family, helical bundle domain
AL552_07965	PF00583	Acetyltransferase (GNAT) family
AL552_07970	PF03222	Tryptophan/tyrosine permease family
AL552_07990	PF00082	Subtilase family
AL552_07990	PF01483	Proprotein convertase P-domain
AL552_08000	PF06445	GyrI-like small molecule binding domain
AL552_08000	PF10604	Polyketide cyclase / dehydrase and lipid transport
AL552_08005	PF00512	His Kinase A (phospho-acceptor) domain
AL552_08010	PF00072	Response regulator receiver domain
AL552_08010	PF00486	Transcriptional regulatory protein, C terminal
AL552_08045	PF04314	Protein of unknown function (DUF461)
AL552_08050	PF00012	Hsp70 protein
AL552_08060	PF08883	Dopa 4,5-dioxygenase family
AL552_08065	PF00676	Dehydrogenase E1 component
AL552_08070	PF02779	Transketolase, pyrimidine binding domain
AL552_08070	PF02780	Transketolase, C-terminal domain
AL552_08085	PF05187	Electron transfer flavoprotein-ubiquinone oxidoreductase
AL552_08085	PF13450	NAD(P)-binding Rossmann-like domain
AL552_08090	PF00028	Cadherin domain
AL552_08090	PF13519	von Willebrand factor type A domain
AL552_08100	PF02321	Outer membrane efflux protein
AL552_08105	PF00691	OmpA family
AL552_08115	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL552_08115	PF12793	AL552_08115
AL552_08120	PF00775	Dioxygenase
AL552_08125	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_08130	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_08135	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL552_08140	PF00005	ABC transporter
AL552_08150	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
AL552_08155	PF12680	SnoaL-like domain
AL552_08160	PF12525	AL552_08160
AL552_08170	PF02028	BCCT family transporter
AL552_08200	PF16084	AL552_08200
AL552_08210	PF01385	AL552_08210
AL552_08210	PF07282	AL552_08210
AL552_08210	PF12323	AL552_08210
AL552_08240	PF02195	ParB-like nuclease domain
AL552_08245	PF13614	AAA domain
AL552_08260	PF00176	SNF2 family N-terminal domain
AL552_08260	PF02384	N-6 DNA Methylase
AL552_08290	PF01051	Initiator Replication protein
AL552_08305	PF01381	Helix-turn-helix
AL552_08325	PF08774	VRR-NUC domain
AL552_08340	PF00216	Bacterial DNA-binding protein
AL552_08345	PF00216	Bacterial DNA-binding protein
AL552_08355	PF05869	AL552_08355
AL552_08370	PF04014	Antidote-toxin recognition MazE
AL552_08375	PF02452	PemK-like protein
AL552_08415	PF00589	Phage integrase family
AL552_08430	PF13437	HlyD family secretion protein
AL552_08430	PF13533	Biotin-lipoyl like
AL552_08435	PF00313	'Cold-shock' DNA-binding domain
AL552_08450	PF07693	AL552_08450
AL552_08470	PF03551	Transcriptional regulator PadR-like family
AL552_08480	PF16786	AL552_08480
AL552_08510	PF00990	GGDEF domain
AL552_08510	PF02743	Cache domain
AL552_08515	PF03692	AL552_08515
AL552_08520	PF07362	Post-segregation antitoxin CcdA
AL552_08525	PF01845	CcdB protein
AL552_08540	PF01385	AL552_08540
AL552_08540	PF07282	AL552_08540
AL552_08540	PF12323	AL552_08540
AL552_08545	PF01797	Transposase IS200 like
AL552_08550	PF00805	Pentapeptide repeats (8 copies)
AL552_08555	PF12840	Helix-turn-helix domain
AL552_08560	PF03773	AL552_08560
AL552_08575	PF00313	'Cold-shock' DNA-binding domain
AL552_08585	PF06965	Na+/H+ antiporter 1
AL552_08590	PF01145	SPFH domain / Band 7 family
AL552_08605	PF00313	'Cold-shock' DNA-binding domain
AL552_08620	PF00583	Acetyltransferase (GNAT) family
AL552_08625	PF11665	AL552_08625
AL552_08630	PF02566	OsmC-like protein
AL552_08645	PF13673	Acetyltransferase (GNAT) domain
AL552_08655	PF11665	AL552_08655
AL552_08665	PF00665	Integrase core domain
AL552_08665	PF13936	Helix-turn-helix domain
AL552_08670	PF11665	AL552_08670
AL552_08675	PF14082	AL552_08675
AL552_08695	PF00665	Integrase core domain
AL552_08695	PF13936	Helix-turn-helix domain
AL552_08705	PF11665	AL552_08705
AL552_08720	PF11665	AL552_08720
AL552_08735	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AL552_08775	PF05488	PAAR motif
AL552_08785	PF01520	N-acetylmuramoyl-L-alanine amidase
AL552_08800	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
AL552_08825	PF02661	Fic/DOC family
AL552_08900	PF03631	AL552_08900
AL552_08905	PF02580	D-Tyr-tRNA(Tyr) deacylase
AL552_08910	PF09500	Putative thioesterase (yiiD_Cterm)
AL552_08910	PF13673	Acetyltransferase (GNAT) domain
AL552_08915	PF05170	AL552_08915
AL552_08920	PF01293	Phosphoenolpyruvate carboxykinase
AL552_08925	PF01430	Hsp33 protein
AL552_08930	PF01479	S4 domain
AL552_08935	PF11356	Type IV pilus biogenesis
AL552_08940	PF00263	AL552_08940
AL552_08940	PF03958	Bacterial type II/III secretion system short domain
AL552_08945	PF00437	Type II/IV secretion system protein
AL552_08950	PF00482	Type II secretion system (T2SS), protein F
AL552_08955	PF07963	Prokaryotic N-terminal methylation motif
AL552_08955	PF08334	Type II secretion system (T2SS), protein G
AL552_08960	PF07963	Prokaryotic N-terminal methylation motif
AL552_08960	PF12019	Type II transport protein GspH
AL552_08965	PF02501	Type II secretion system (T2SS), protein I
AL552_08975	PF03934	Type II secretion system (T2SS), protein K
AL552_08980	PF05134	Type II secretion system (T2SS), protein L
AL552_08980	PF12693	GspL periplasmic domain
AL552_08985	PF04612	Type II secretion system (T2SS), protein M
AL552_08990	PF01203	AL552_08990
AL552_08995	PF00459	Inositol monophosphatase family
AL552_09000	PF00293	NUDIX domain
AL552_09005	PF01106	NifU-like domain
AL552_09005	PF01521	Iron-sulphur cluster biosynthesis
AL552_09010	PF00156	Phosphoribosyl transferase domain
AL552_09015	PF00561	alpha/beta hydrolase fold
AL552_09025	PF00575	S1 RNA binding domain
AL552_09025	PF09371	Tex-like protein N-terminal domain
AL552_09025	PF12836	Helix-hairpin-helix motif
AL552_09025	PF16921	AL552_09025
AL552_09030	PF05618	Putative ATP-dependant zinc protease
AL552_09035	PF01272	Transcription elongation factor, GreA/GreB, C-term
AL552_09035	PF03449	Transcription elongation factor, N-terminal
AL552_09040	PF06476	AL552_09040
AL552_09045	PF00072	Response regulator receiver domain
AL552_09045	PF00486	Transcriptional regulatory protein, C terminal
AL552_09050	PF00512	His Kinase A (phospho-acceptor) domain
AL552_09050	PF00672	HAMP domain
AL552_09050	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_09055	PF00860	Permease family
AL552_09060	PF00270	DEAD/DEAH box helicase
AL552_09060	PF00271	Helicase conserved C-terminal domain
AL552_09060	PF17191	AL552_09060
AL552_09065	PF00588	SpoU rRNA Methylase family
AL552_09065	PF12105	SpoU, rRNA methylase, C-terminal
AL552_09070	PF02824	TGS domain
AL552_09070	PF04607	Region found in RelA / SpoT proteins
AL552_09070	PF13291	ACT domain
AL552_09070	PF13328	HD domain
AL552_09075	PF01192	RNA polymerase Rpb6
AL552_09080	PF00625	Guanylate kinase
AL552_09085	PF13181	Tetratricopeptide repeat
AL552_09090	PF03544	Gram-negative bacterial TonB protein C-terminal
AL552_09095	PF02472	Biopolymer transport protein ExbD/TolR
AL552_09100	PF01618	AL552_09100
AL552_09105	PF01618	AL552_09105
AL552_09110	PF11932	AL552_09110
AL552_09115	PF00593	TonB dependent receptor
AL552_09115	PF07715	TonB-dependent Receptor Plug Domain
AL552_09125	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_09140	PF00005	ABC transporter
AL552_09140	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL552_09145	PF00005	ABC transporter
AL552_09150	PF06146	AL552_09150
AL552_09160	PF12833	Helix-turn-helix domain
AL552_09165	PF02423	Ornithine cyclodeaminase/mu-crystallin family
AL552_09170	PF03553	AL552_09170
AL552_09200	PF00350	Dynamin family
AL552_09210	PF11726	AL552_09210
AL552_09225	PF05930	Prophage CP4-57 regulatory protein (AlpA)
AL552_09230	PF00589	Phage integrase family
AL552_09230	PF13356	Domain of unknown function (DUF4102)
AL552_09235	PF03755	AL552_09235
AL552_09235	PF08340	AL552_09235
AL552_09245	PF01138	3' exoribonuclease family, domain 1
AL552_09245	PF03725	3' exoribonuclease family, domain 2
AL552_09250	PF00156	Phosphoribosyl transferase domain
AL552_09255	PF03279	AL552_09255
AL552_09260	PF00440	Bacterial regulatory proteins, tetR family
AL552_09265	PF02441	Flavoprotein
AL552_09265	PF04127	DNA / pantothenate metabolism flavoprotein
AL552_09275	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL552_09275	PF00672	HAMP domain
AL552_09275	PF17200	AL552_09275
AL552_09280	PF04002	RadC-like JAB domain
AL552_09285	PF00830	Ribosomal L28 family
AL552_09290	PF00471	Ribosomal protein L33
AL552_09300	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
AL552_09300	PF06827	Zinc finger found in FPG and IleRS
AL552_09300	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
AL552_09305	PF05686	AL552_09305
AL552_09310	PF01467	Cytidylyltransferase
AL552_09315	PF00534	Glycosyl transferases group 1
AL552_09320	PF00535	Glycosyl transferase family 2
AL552_09325	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AL552_09330	PF01219	Prokaryotic diacylglycerol kinase
AL552_09335	PF06293	Lipopolysaccharide kinase (Kdo/WaaP) family
AL552_09340	PF16363	AL552_09340
AL552_09345	PF00483	Nucleotidyl transferase
AL552_09350	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
AL552_09355	PF08889	AL552_09355
AL552_09360	PF00685	Sulfotransferase domain
AL552_09365	PF00535	Glycosyl transferase family 2
AL552_09370	PF00009	Elongation factor Tu GTP binding domain
AL552_09370	PF03143	Elongation factor Tu C-terminal domain
AL552_09375	PF01583	Adenylylsulphate kinase
AL552_09380	PF01507	Phosphoadenosine phosphosulfate reductase family
AL552_09385	PF02080	TrkA-C domain
AL552_09385	PF03600	Citrate transporter
AL552_09390	PF00534	Glycosyl transferases group 1
AL552_09390	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
AL552_09395	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AL552_09400	PF01755	AL552_09400
AL552_09405	PF03279	AL552_09405
AL552_09410	PF01370	NAD dependent epimerase/dehydratase family
AL552_09415	PF06082	AL552_09415
AL552_09420	PF06251	Capsule biosynthesis GfcC
AL552_09425	PF11102	Group 4 capsule polysaccharide formation lipoprotein gfcB
AL552_09440	PF07963	Prokaryotic N-terminal methylation motif
AL552_09440	PF08334	Type II secretion system (T2SS), protein G
AL552_09445	PF00437	Type II/IV secretion system protein
AL552_09445	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
AL552_09450	PF00482	Type II secretion system (T2SS), protein F
AL552_09455	PF07963	Prokaryotic N-terminal methylation motif
AL552_09460	PF00263	AL552_09460
AL552_09460	PF03958	Bacterial type II/III secretion system short domain
AL552_09465	PF07963	Prokaryotic N-terminal methylation motif
AL552_09470	PF07963	Prokaryotic N-terminal methylation motif
AL552_09495	PF13505	Outer membrane protein beta-barrel domain
AL552_09500	PF02563	Polysaccharide biosynthesis/export protein
AL552_09500	PF06251	Capsule biosynthesis GfcC
AL552_09500	PF10531	SLBB domain
AL552_09505	PF02706	Chain length determinant protein
AL552_09505	PF13807	AL552_09505
AL552_09515	PF00535	Glycosyl transferase family 2
AL552_09520	PF00535	Glycosyl transferase family 2
AL552_09525	PF01943	AL552_09525
AL552_09525	PF14667	Polysaccharide biosynthesis C-terminal domain
AL552_09530	PF00881	Nitroreductase family
AL552_09535	PF04230	AL552_09535
AL552_09540	PF00535	Glycosyl transferase family 2
AL552_09545	PF02397	AL552_09545
AL552_09555	PF00953	Glycosyl transferase family 4
AL552_09565	PF13440	AL552_09565
AL552_09575	PF00534	Glycosyl transferases group 1
AL552_09575	PF13439	Glycosyltransferase Family 4
AL552_09580	PF14305	AL552_09580
AL552_09585	PF16363	AL552_09585
AL552_09590	PF00534	Glycosyl transferases group 1
AL552_09590	PF13477	Glycosyl transferase 4-like
AL552_09595	PF06082	AL552_09595
AL552_09600	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AL552_09600	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
AL552_09600	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AL552_09605	PF00483	Nucleotidyl transferase
AL552_09610	PF00121	Triosephosphate isomerase
AL552_09615	PF02962	5-carboxymethyl-2-hydroxymuconate isomerase
AL552_09620	PF05656	AL552_09620
AL552_09625	PF01541	GIY-YIG catalytic domain
AL552_09630	PF11333	AL552_09630
AL552_09635	PF13412	Winged helix-turn-helix DNA-binding
AL552_09640	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
AL552_09650	PF06005	Protein of unknown function (DUF904)
AL552_09655	PF03737	Demethylmenaquinone methyltransferase
AL552_09660	PF01040	UbiA prenyltransferase family
AL552_09665	PF00004	ATPase family associated with various cellular activities (AAA)
AL552_09665	PF07724	AAA domain (Cdc48 subfamily)
AL552_09670	PF00227	Proteasome subunit
AL552_09675	PF05036	Sporulation related domain
AL552_09680	PF00356	Bacterial regulatory proteins, lacI family
AL552_09680	PF13377	Periplasmic binding protein-like domain
AL552_09685	PF00270	DEAD/DEAH box helicase
AL552_09685	PF00271	Helicase conserved C-terminal domain
AL552_09695	PF01197	Ribosomal protein L31
AL552_09700	PF00338	Ribosomal protein S10p/S20e
AL552_09705	PF00297	Ribosomal protein L3
AL552_09710	PF00573	Ribosomal protein L4/L1 family
AL552_09715	PF00276	Ribosomal protein L23
AL552_09720	PF00181	Ribosomal Proteins L2, RNA binding domain
AL552_09720	PF03947	Ribosomal Proteins L2, C-terminal domain
AL552_09725	PF00203	Ribosomal protein S19
AL552_09730	PF00237	Ribosomal protein L22p/L17e
AL552_09735	PF00189	Ribosomal protein S3, C-terminal domain
AL552_09735	PF07650	KH domain
AL552_09740	PF00252	Ribosomal protein L16p/L10e
AL552_09745	PF00831	Ribosomal L29 protein
AL552_09750	PF00366	Ribosomal protein S17
AL552_09755	PF00238	Ribosomal protein L14p/L23e
AL552_09760	PF00467	KOW motif
AL552_09760	PF17136	AL552_09760
AL552_09765	PF00281	Ribosomal protein L5
AL552_09765	PF00673	ribosomal L5P family C-terminus
AL552_09770	PF00253	Ribosomal protein S14p/S29e
AL552_09775	PF00410	Ribosomal protein S8
AL552_09780	PF00347	Ribosomal protein L6
AL552_09785	PF00861	Ribosomal L18p/L5e family
AL552_09790	PF00333	Ribosomal protein S5, N-terminal domain
AL552_09790	PF03719	Ribosomal protein S5, C-terminal domain
AL552_09795	PF00327	Ribosomal protein L30p/L7e
AL552_09800	PF00828	Ribosomal protein L18e/L15
AL552_09805	PF00344	SecY translocase
AL552_09810	PF00444	Ribosomal protein L36
AL552_09815	PF00416	Ribosomal protein S13/S18
AL552_09820	PF00411	Ribosomal protein S11
AL552_09825	PF00163	Ribosomal protein S4/S9 N-terminal domain
AL552_09825	PF01479	S4 domain
AL552_09830	PF01000	RNA polymerase Rpb3/RpoA insert domain
AL552_09830	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
AL552_09830	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
AL552_09835	PF01196	Ribosomal protein L17
AL552_09840	PF11075	AL552_09840
AL552_09845	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL552_09845	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
AL552_09850	PF04225	Opacity-associated protein A LysM-like domain
AL552_09850	PF08525	AL552_09850
AL552_09855	PF13673	Acetyltransferase (GNAT) domain
AL552_09860	PF00270	DEAD/DEAH box helicase
AL552_09860	PF00271	Helicase conserved C-terminal domain
AL552_09860	PF03880	DbpA RNA binding domain
AL552_09865	PF00027	Cyclic nucleotide-binding domain
AL552_09870	PF00149	Calcineurin-like phosphoesterase
AL552_09870	PF02872	5'-nucleotidase, C-terminal domain
AL552_09880	PF01507	Phosphoadenosine phosphosulfate reductase family
AL552_09885	PF00009	Elongation factor Tu GTP binding domain
AL552_09890	PF02080	TrkA-C domain
AL552_09890	PF03600	Citrate transporter
AL552_09895	PF01583	Adenylylsulphate kinase
AL552_09900	PF10987	AL552_09900
AL552_09905	PF11736	Protein of unknown function (DUF3299)
AL552_09910	PF02687	AL552_09910
AL552_09910	PF12704	MacB-like periplasmic core domain
AL552_09915	PF00005	ABC transporter
AL552_09920	PF10986	AL552_09920
AL552_09925	PF10795	AL552_09925
AL552_09930	PF09695	AL552_09930
AL552_09935	PF06526	Protein of unknown function (DUF1107)
AL552_09940	PF01625	Peptide methionine sulfoxide reductase
AL552_09945	PF01103	Surface antigen
AL552_09945	PF07244	Surface antigen variable number repeat
AL552_09945	PF17243	AL552_09945
AL552_09950	PF04357	AL552_09950
AL552_09955	PF06094	AIG2-like family
AL552_09960	PF10973	AL552_09960
AL552_09965	PF00719	Inorganic pyrophosphatase
AL552_09970	PF00316	Fructose-1-6-bisphosphatase
AL552_09980	PF01225	Mur ligase family, catalytic domain
AL552_09980	PF02875	Mur ligase family, glutamate ligase domain
AL552_09980	PF08245	Mur ligase middle domain
AL552_09985	PF02441	Flavoprotein
AL552_09990	PF13343	Bacterial extracellular solute-binding protein
AL552_09995	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_10000	PF00005	ABC transporter
AL552_10005	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_10005	PF03466	LysR substrate binding domain
AL552_10015	PF00582	Universal stress protein family
AL552_10020	PF06808	AL552_10020
AL552_10020	PF11874	AL552_10020
AL552_10025	PF16868	AL552_10025
AL552_10035	PF01316	Arginine repressor, DNA binding domain
AL552_10035	PF02863	Arginine repressor, C-terminal domain
AL552_10040	PF00056	lactate/malate dehydrogenase, NAD binding domain
AL552_10040	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
AL552_10050	PF00348	Polyprenyl synthetase
AL552_10055	PF00829	Ribosomal prokaryotic L21 protein
AL552_10060	PF01016	Ribosomal L27 protein
AL552_10065	PF01018	GTP1/OBG
AL552_10065	PF01926	50S ribosome-binding GTPase
AL552_10070	PF06738	AL552_10070
AL552_10075	PF12821	AL552_10075
AL552_10080	PF00186	Dihydrofolate reductase
AL552_10085	PF00149	Calcineurin-like phosphoesterase
AL552_10090	PF04379	Protein of unknown function (DUF525)
AL552_10095	PF00398	Ribosomal RNA adenine dimethylase
AL552_10100	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
AL552_10105	PF09312	SurA N-terminal domain
AL552_10105	PF13616	PPIC-type PPIASE domain
AL552_10110	PF03968	OstA-like protein
AL552_10110	PF04453	Organic solvent tolerance protein
AL552_10115	PF00226	DnaJ domain
AL552_10115	PF05099	Tellurite resistance protein TerB
AL552_10120	PF04784	AL552_10120
AL552_10125	PF00694	Aconitase C-terminal domain
AL552_10130	PF00330	Aconitase family (aconitate hydratase)
AL552_10135	PF00180	Isocitrate/isopropylmalate dehydrogenase
AL552_10140	PF00682	HMGL-like
AL552_10140	PF08502	LeuA allosteric (dimerisation) domain
AL552_10150	PF08239	Bacterial SH3 domain
AL552_10155	PF01569	PAP2 superfamily
AL552_10160	PF13528	Glycosyl transferase family 1
AL552_10165	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_10165	PF03466	LysR substrate binding domain
AL552_10175	PF00205	Thiamine pyrophosphate enzyme, central domain
AL552_10175	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL552_10175	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL552_10180	PF10369	Small subunit of acetolactate synthase
AL552_10180	PF13710	ACT domain
AL552_10185	PF00990	GGDEF domain
AL552_10185	PF02743	Cache domain
AL552_10185	PF13426	PAS domain
AL552_10190	PF00392	Bacterial regulatory proteins, gntR family
AL552_10195	PF00224	Pyruvate kinase, barrel domain
AL552_10195	PF02887	Pyruvate kinase, alpha/beta domain
AL552_10205	PF00455	AL552_10205
AL552_10205	PF08220	DeoR-like helix-turn-helix domain
AL552_10210	PF01380	SIS domain
AL552_10210	PF13522	Glutamine amidotransferase domain
AL552_10215	PF11777	AL552_10215
AL552_10220	PF00072	Response regulator receiver domain
AL552_10220	PF00486	Transcriptional regulatory protein, C terminal
AL552_10225	PF00512	His Kinase A (phospho-acceptor) domain
AL552_10225	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_10230	PF00465	Iron-containing alcohol dehydrogenase
AL552_10235	PF02733	Dak1 domain
AL552_10240	PF02734	DAK2 domain
AL552_10245	PF00381	PTS HPr component phosphorylation site
AL552_10245	PF00391	PEP-utilising enzyme, mobile domain
AL552_10245	PF02896	PEP-utilising enzyme, TIM barrel domain
AL552_10245	PF03610	PTS system fructose IIA component
AL552_10245	PF05524	PEP-utilising enzyme, N-terminal
AL552_10250	PF00158	Sigma-54 interaction domain
AL552_10250	PF00989	PAS fold
AL552_10250	PF02954	Bacterial regulatory protein, Fis family
AL552_10255	PF05068	Mannitol repressor
AL552_10260	PF01232	Mannitol dehydrogenase Rossmann domain
AL552_10260	PF08125	Mannitol dehydrogenase C-terminal domain
AL552_10265	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL552_10265	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL552_10265	PF02378	Phosphotransferase system, EIIC
AL552_10275	PF13444	Acetyltransferase (GNAT) domain
AL552_10285	PF04402	Protein of unknown function (DUF541)
AL552_10290	PF14321	AL552_10290
AL552_10300	PF03180	NLPA lipoprotein
AL552_10310	PF00140	Sigma-70 factor, region 1
AL552_10310	PF03979	Sigma-70 factor, region 1
AL552_10310	PF04539	Sigma-70 region 3
AL552_10310	PF04542	Sigma-70 region 2
AL552_10310	PF04545	Sigma-70, region 4
AL552_10310	PF04546	Sigma-70, non-essential region
AL552_10315	PF01807	CHC2 zinc finger
AL552_10315	PF08275	DNA primase catalytic core, N-terminal domain
AL552_10315	PF08278	DNA primase DnaG DnaB-binding
AL552_10315	PF10410	DnaB-helicase binding domain of primase
AL552_10315	PF13155	Toprim-like
AL552_10320	PF09424	Yqey-like protein
AL552_10325	PF01165	Ribosomal protein S21
AL552_10330	PF00814	Glycoprotease family
AL552_10335	PF00561	alpha/beta hydrolase fold
AL552_10340	PF02660	AL552_10340
AL552_10345	PF02152	Dihydroneopterin aldolase
AL552_10350	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
AL552_10355	PF02673	AL552_10355
AL552_10360	PF01743	Poly A polymerase head domain
AL552_10360	PF01966	HD domain
AL552_10360	PF12627	Probable RNA and SrmB- binding site of polymerase A
AL552_10365	PF01471	Putative peptidoglycan binding domain
AL552_10365	PF13401	AAA domain
AL552_10370	PF16537	AL552_10370
AL552_10375	PF01019	Gamma-glutamyltranspeptidase
AL552_10380	PF08239	Bacterial SH3 domain
AL552_10385	PF01384	AL552_10385
AL552_10390	PF01865	Protein of unknown function DUF47
AL552_10395	PF01928	CYTH domain
AL552_10395	PF05235	CHAD domain
AL552_10400	PF07885	Ion channel
AL552_10405	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL552_10415	PF00294	pfkB family carbohydrate kinase
AL552_10415	PF01467	Cytidylyltransferase
AL552_10420	PF02321	Outer membrane efflux protein
AL552_10425	PF00293	NUDIX domain
AL552_10430	PF06853	AL552_10430
AL552_10435	PF00149	Calcineurin-like phosphoesterase
AL552_10440	PF05728	Uncharacterised protein family (UPF0227)
AL552_10445	PF00204	DNA gyrase B
AL552_10445	PF00986	DNA gyrase B subunit, carboxyl terminus
AL552_10445	PF01751	Toprim domain
AL552_10445	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_10450	PF00521	DNA gyrase/topoisomerase IV, subunit A
AL552_10450	PF03989	DNA gyrase C-terminal domain, beta-propeller
AL552_10455	PF13180	PDZ domain
AL552_10455	PF13365	Trypsin-like peptidase domain
AL552_10460	PF00595	PDZ domain (Also known as DHR or GLGF)
AL552_10460	PF13180	PDZ domain
AL552_10460	PF13365	Trypsin-like peptidase domain
AL552_10465	PF06295	AL552_10465
AL552_10475	PF03969	AFG1-like ATPase
AL552_10485	PF00572	Ribosomal protein L13
AL552_10490	PF00380	Ribosomal protein S9/S16
AL552_10495	PF00355	Rieske [2Fe-2S] domain
AL552_10495	PF10399	Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
AL552_10500	PF00032	Cytochrome b(C-terminal)/b6/petD
AL552_10500	PF00033	Cytochrome b(N-terminal)/b6/petB
AL552_10505	PF02167	Cytochrome C1 family
AL552_10510	PF00043	Glutathione S-transferase, C-terminal domain
AL552_10510	PF13417	Glutathione S-transferase, N-terminal domain
AL552_10515	PF04386	Stringent starvation protein B
AL552_10520	PF04972	BON domain
AL552_10525	PF13580	SIS domain
AL552_10530	PF02021	Uncharacterised protein family UPF0102
AL552_10535	PF04348	LppC putative lipoprotein
AL552_10540	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AL552_10555	PF01795	MraW methylase family
AL552_10560	PF04999	AL552_10560
AL552_10565	PF00905	Penicillin binding protein transpeptidase domain
AL552_10565	PF03717	Penicillin-binding Protein dimerisation domain
AL552_10570	PF01225	Mur ligase family, catalytic domain
AL552_10570	PF02875	Mur ligase family, glutamate ligase domain
AL552_10570	PF08245	Mur ligase middle domain
AL552_10575	PF01225	Mur ligase family, catalytic domain
AL552_10575	PF02875	Mur ligase family, glutamate ligase domain
AL552_10575	PF08245	Mur ligase middle domain
AL552_10580	PF00953	Glycosyl transferase family 4
AL552_10580	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
AL552_10585	PF02875	Mur ligase family, glutamate ligase domain
AL552_10585	PF08245	Mur ligase middle domain
AL552_10590	PF01098	AL552_10590
AL552_10595	PF03033	Glycosyltransferase family 28 N-terminal domain
AL552_10595	PF04101	Glycosyltransferase family 28 C-terminal domain
AL552_10600	PF01225	Mur ligase family, catalytic domain
AL552_10600	PF02875	Mur ligase family, glutamate ligase domain
AL552_10600	PF08245	Mur ligase middle domain
AL552_10605	PF03799	Cell division protein FtsQ
AL552_10605	PF08478	POTRA domain, FtsQ-type
AL552_10610	PF02491	SHS2 domain inserted in FTSA
AL552_10610	PF14450	Cell division protein FtsA
AL552_10615	PF00091	Tubulin/FtsZ family, GTPase domain
AL552_10615	PF12327	FtsZ family, C-terminal domain
AL552_10620	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
AL552_10625	PF05258	AL552_10625
AL552_10630	PF01043	SecA preprotein cross-linking domain
AL552_10630	PF02810	SEC-C motif
AL552_10630	PF07516	SecA Wing and Scaffold domain
AL552_10630	PF07517	SecA DEAD-like domain
AL552_10635	PF00293	NUDIX domain
AL552_10640	PF01113	Dihydrodipicolinate reductase, N-terminus
AL552_10640	PF05173	Dihydrodipicolinate reductase, C-terminus
AL552_10645	PF00117	Glutamine amidotransferase class-I
AL552_10645	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
AL552_10650	PF02142	MGS-like domain
AL552_10650	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AL552_10650	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AL552_10670	PF01925	AL552_10670
AL552_10685	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_10685	PF03466	LysR substrate binding domain
AL552_10690	PF03458	AL552_10690
AL552_10695	PF01497	Periplasmic binding protein
AL552_10700	PF03186	AL552_10700
AL552_10705	PF01048	Phosphorylase superfamily
AL552_10710	PF07386	AL552_10710
AL552_10715	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL552_10715	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
AL552_10720	PF00310	Glutamine amidotransferases class-II
AL552_10720	PF01493	GXGXG motif
AL552_10720	PF01645	Conserved region in glutamate synthase
AL552_10720	PF04898	Glutamate synthase central domain
AL552_10725	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL552_10725	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
AL552_10730	PF00310	Glutamine amidotransferases class-II
AL552_10730	PF01493	GXGXG motif
AL552_10730	PF01645	Conserved region in glutamate synthase
AL552_10730	PF04898	Glutamate synthase central domain
AL552_10735	PF04055	Radical SAM superfamily
AL552_10735	PF16199	AL552_10735
AL552_10740	PF00990	GGDEF domain
AL552_10740	PF08448	PAS fold
AL552_10740	PF13188	PAS domain
AL552_10745	PF00072	Response regulator receiver domain
AL552_10745	PF00512	His Kinase A (phospho-acceptor) domain
AL552_10745	PF01627	Hpt domain
AL552_10745	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_10745	PF08448	PAS fold
AL552_10755	PF00072	Response regulator receiver domain
AL552_10755	PF00486	Transcriptional regulatory protein, C terminal
AL552_10765	PF11697	AL552_10765
AL552_10770	PF03737	Demethylmenaquinone methyltransferase
AL552_10785	PF00696	Amino acid kinase family
AL552_10785	PF00742	Homoserine dehydrogenase
AL552_10785	PF01842	ACT domain
AL552_10785	PF03447	Homoserine dehydrogenase, NAD binding domain
AL552_10785	PF13840	ACT domain
AL552_10790	PF00288	GHMP kinases N terminal domain
AL552_10790	PF08544	GHMP kinases C terminal
AL552_10795	PF00291	Pyridoxal-phosphate dependent enzyme
AL552_10795	PF14821	Threonine synthase N terminus
AL552_10800	PF03358	NADPH-dependent FMN reductase
AL552_10805	PF01228	Glycine radical
AL552_10810	PF01261	Xylose isomerase-like TIM barrel
AL552_10820	PF03167	Uracil DNA glycosylase superfamily
AL552_10825	PF01814	Hemerythrin HHE cation binding domain
AL552_10830	PF12065	AL552_10830
AL552_10835	PF01235	AL552_10835
AL552_10840	PF03883	AL552_10840
AL552_10845	PF00270	DEAD/DEAH box helicase
AL552_10845	PF00271	Helicase conserved C-terminal domain
AL552_10850	PF05175	Methyltransferase small domain
AL552_10855	PF05525	AL552_10855
AL552_10860	PF00258	Flavodoxin
AL552_10865	PF00589	Phage integrase family
AL552_10865	PF02899	Phage integrase, N-terminal SAM-like domain
AL552_10870	PF10411	Disulfide bond isomerase protein N-terminus
AL552_10870	PF13098	Thioredoxin-like domain
AL552_10885	PF00152	tRNA synthetases class II (D, K and N)
AL552_10885	PF01336	OB-fold nucleic acid binding domain
AL552_10890	PF00158	Sigma-54 interaction domain
AL552_10890	PF02954	Bacterial regulatory protein, Fis family
AL552_10900	PF00248	Aldo/keto reductase family
AL552_10910	PF02976	DNA mismatch repair enzyme MutH
AL552_10920	PF00293	NUDIX domain
AL552_10925	PF00391	PEP-utilising enzyme, mobile domain
AL552_10925	PF01590	GAF domain
AL552_10925	PF02896	PEP-utilising enzyme, TIM barrel domain
AL552_10925	PF05524	PEP-utilising enzyme, N-terminal
AL552_10930	PF01925	AL552_10930
AL552_10935	PF01790	AL552_10935
AL552_10940	PF00303	Thymidylate synthase
AL552_10945	PF08014	AL552_10945
AL552_10950	PF02690	AL552_10950
AL552_10955	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_10955	PF03466	LysR substrate binding domain
AL552_10960	PF01022	Bacterial regulatory protein, arsR family
AL552_10965	PF01649	Ribosomal protein S20
AL552_10970	PF03023	AL552_10970
AL552_10975	PF01687	Riboflavin kinase
AL552_10975	PF06574	FAD synthetase
AL552_10980	PF00133	tRNA synthetases class I (I, L, M and V)
AL552_10980	PF06827	Zinc finger found in FPG and IleRS
AL552_10980	PF08264	Anticodon-binding domain of tRNA
AL552_10985	PF01252	AL552_10985
AL552_10990	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL552_10995	PF02401	LytB protein
AL552_11000	PF01451	Low molecular weight phosphotyrosine protein phosphatase
AL552_11005	PF00072	Response regulator receiver domain
AL552_11005	PF04397	LytTr DNA-binding domain
AL552_11010	PF06580	AL552_11010
AL552_11010	PF07694	5TMR of 5TMR-LYT
AL552_11010	PF13492	GAF domain
AL552_11015	PF02554	AL552_11015
AL552_11015	PF13722	AL552_11015
AL552_11020	PF10973	AL552_11020
AL552_11030	PF13580	SIS domain
AL552_11035	PF03702	Uncharacterised protein family (UPF0075)
AL552_11040	PF00933	Glycosyl hydrolase family 3 N terminal domain
AL552_11045	PF00793	DAHP synthetase I family
AL552_11050	PF01817	Chorismate mutase type II
AL552_11050	PF02153	Prephenate dehydrogenase
AL552_11055	PF01551	Peptidase family M23
AL552_11060	PF07238	PilZ domain
AL552_11065	PF00005	ABC transporter
AL552_11065	PF12848	ABC transporter
AL552_11070	PF01464	Transglycosylase SLT domain
AL552_11070	PF14718	Soluble lytic murein transglycosylase L domain
AL552_11075	PF01371	Trp repressor protein
AL552_11080	PF01931	Protein of unknown function DUF84
AL552_11085	PF00800	Prephenate dehydratase
AL552_11085	PF01817	Chorismate mutase type II
AL552_11090	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
AL552_11095	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL552_11095	PF01464	Transglycosylase SLT domain
AL552_11100	PF13525	Outer membrane lipoprotein
AL552_11105	PF00849	RNA pseudouridylate synthase
AL552_11105	PF01479	S4 domain
AL552_11110	PF02578	Multi-copper polyphenol oxidoreductase laccase
AL552_11115	PF00004	ATPase family associated with various cellular activities (AAA)
AL552_11115	PF02861	Clp amino terminal domain
AL552_11115	PF07724	AAA domain (Cdc48 subfamily)
AL552_11115	PF10431	C-terminal, D2-small domain, of ClpB protein
AL552_11160	PF08921	Domain of unknown function (DUF1904)
AL552_11165	PF03411	Penicillin-insensitive murein endopeptidase
AL552_11175	PF00037	4Fe-4S binding domain
AL552_11180	PF01136	AL552_11180
AL552_11180	PF16325	AL552_11180
AL552_11185	PF04381	Putative exonuclease, RdgC
AL552_11195	PF00072	Response regulator receiver domain
AL552_11195	PF00486	Transcriptional regulatory protein, C terminal
AL552_11200	PF00512	His Kinase A (phospho-acceptor) domain
AL552_11200	PF00989	PAS fold
AL552_11200	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_11200	PF11808	AL552_11200
AL552_11210	PF02541	Ppx/GppA phosphatase family
AL552_11215	PF02503	Polyphosphate kinase middle domain
AL552_11215	PF13089	Polyphosphate kinase N-terminal domain
AL552_11215	PF13090	Polyphosphate kinase C-terminal domain
AL552_11220	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_11225	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_11230	PF00005	ABC transporter
AL552_11235	PF01895	PhoU domain
AL552_11240	PF03976	Polyphosphate kinase 2 (PPK2)
AL552_11245	PF03932	CutC family
AL552_11255	PF00578	AhpC/TSA family
AL552_11255	PF10417	C-terminal domain of 1-Cys peroxiredoxin
AL552_11260	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_11260	PF03466	LysR substrate binding domain
AL552_11265	PF01274	Malate synthase
AL552_11270	PF00463	Isocitrate lyase family
AL552_11275	PF00571	CBS domain
AL552_11285	PF00089	Trypsin
AL552_11290	PF02547	Queuosine biosynthesis protein
AL552_11295	PF01702	Queuine tRNA-ribosyltransferase
AL552_11300	PF02699	Preprotein translocase subunit
AL552_11305	PF02355	Protein export membrane protein
AL552_11305	PF07549	SecD/SecF GG Motif
AL552_11305	PF13721	SecD export protein N-terminal TM region
AL552_11310	PF02355	Protein export membrane protein
AL552_11310	PF07549	SecD/SecF GG Motif
AL552_11315	PF00459	Inositol monophosphatase family
AL552_11325	PF02082	Transcriptional regulator
AL552_11330	PF00266	Aminotransferase class-V
AL552_11335	PF01592	NifU-like N terminal domain
AL552_11340	PF01521	Iron-sulphur cluster biosynthesis
AL552_11345	PF00226	DnaJ domain
AL552_11345	PF07743	HSCB C-terminal oligomerisation domain
AL552_11350	PF00012	Hsp70 protein
AL552_11355	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL552_11360	PF04384	Iron-sulphur cluster assembly
AL552_11365	PF00883	Cytosol aminopeptidase family, catalytic domain
AL552_11365	PF12404	AL552_11365
AL552_11370	PF00334	Nucleoside diphosphate kinase
AL552_11375	PF04055	Radical SAM superfamily
AL552_11385	PF13413	Helix-turn-helix domain
AL552_11385	PF13464	AL552_11385
AL552_11390	PF04551	GcpE protein
AL552_11395	PF03129	Anticodon binding domain
AL552_11395	PF13393	Histidyl-tRNA synthetase
AL552_11400	PF09976	Tetratricopeptide repeat
AL552_11405	PF13360	PQQ-like domain
AL552_11410	PF01926	50S ribosome-binding GTPase
AL552_11410	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
AL552_11420	PF07191	zinc-ribbons
AL552_11425	PF02601	AL552_11425
AL552_11425	PF13742	AL552_11425
AL552_11430	PF00478	IMP dehydrogenase / GMP reductase domain
AL552_11430	PF00571	CBS domain
AL552_11435	PF00117	Glutamine amidotransferase class-I
AL552_11435	PF00958	GMP synthase C terminal domain
AL552_11435	PF02540	NAD synthase
AL552_11440	PF03553	AL552_11440
AL552_11445	PF00182	Chitinase class I
AL552_11450	PF01184	AL552_11450
AL552_11455	PF01235	AL552_11455
AL552_11460	PF01266	FAD dependent oxidoreductase
AL552_11465	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_11465	PF03466	LysR substrate binding domain
AL552_11470	PF07969	Amidohydrolase family
AL552_11475	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL552_11480	PF00202	Aminotransferase class-III
AL552_11485	PF05853	Prokaryotic protein of unknown function (DUF849)
AL552_11490	PF03553	AL552_11490
AL552_11495	PF09335	AL552_11495
AL552_11500	PF00583	Acetyltransferase (GNAT) family
AL552_11500	PF00795	Carbon-nitrogen hydrolase
AL552_11505	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_11505	PF03466	LysR substrate binding domain
AL552_11510	PF13505	Outer membrane protein beta-barrel domain
AL552_11515	PF01764	Lipase (class 3)
AL552_11530	PF01668	SmpB protein
AL552_11535	PF03364	Polyketide cyclase / dehydrase and lipid transport
AL552_11540	PF03658	RnfH family Ubiquitin
AL552_11545	PF04355	SmpA / OmlA family
AL552_11550	PF02463	RecF/RecN/SMC N terminal domain
AL552_11555	PF11301	AL552_11555
AL552_11560	PF01513	ATP-NAD kinase
AL552_11565	PF01025	GrpE
AL552_11570	PF00375	Sodium:dicarboxylate symporter family
AL552_11575	PF00012	Hsp70 protein
AL552_11580	PF00226	DnaJ domain
AL552_11580	PF00684	DnaJ central domain
AL552_11580	PF01556	DnaJ C terminal domain
AL552_11585	PF07963	Prokaryotic N-terminal methylation motif
AL552_11585	PF16732	AL552_11585
AL552_11590	PF07963	Prokaryotic N-terminal methylation motif
AL552_11590	PF12019	Type II transport protein GspH
AL552_11605	PF07963	Prokaryotic N-terminal methylation motif
AL552_11610	PF03806	AL552_11610
AL552_11625	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL552_11625	PF01464	Transglycosylase SLT domain
AL552_11630	PF02769	AIR synthase related protein, C-terminal domain
AL552_11630	PF13507	CobB/CobQ-like glutamine amidotransferase domain
AL552_11635	PF12286	AL552_11635
AL552_11645	PF00593	TonB dependent receptor
AL552_11645	PF07715	TonB-dependent Receptor Plug Domain
AL552_11650	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AL552_11655	PF11810	AL552_11655
AL552_11660	PF01546	Peptidase family M20/M25/M40
AL552_11660	PF07687	Peptidase dimerisation domain
AL552_11665	PF00860	Permease family
AL552_11670	PF00156	Phosphoribosyl transferase domain
AL552_11675	PF06500	Alpha/beta hydrolase of unknown function (DUF1100)
AL552_11680	PF07417	Transcriptional regulator Crl
AL552_11685	PF00696	Amino acid kinase family
AL552_11685	PF01472	PUA domain
AL552_11690	PF00171	Aldehyde dehydrogenase family
AL552_11695	PF03477	ATP cone domain
AL552_11700	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AL552_11700	PF01872	RibD C-terminal domain
AL552_11705	PF00677	Lumazine binding domain
AL552_11710	PF00925	GTP cyclohydrolase II
AL552_11710	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
AL552_11715	PF00885	6,7-dimethyl-8-ribityllumazine synthase
AL552_11720	PF01029	NusB family
AL552_11725	PF00586	AIR synthase related protein, N-terminal domain
AL552_11725	PF02769	AIR synthase related protein, C-terminal domain
AL552_11730	PF04608	Phosphatidylglycerophosphatase A
AL552_11735	PF02779	Transketolase, pyrimidine binding domain
AL552_11735	PF02780	Transketolase, C-terminal domain
AL552_11735	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
AL552_11740	PF00348	Polyprenyl synthetase
AL552_11745	PF02609	Exonuclease VII small subunit
AL552_11750	PF01618	AL552_11750
AL552_11755	PF00691	OmpA family
AL552_11755	PF13677	AL552_11755
AL552_11760	PF02568	Thiamine biosynthesis protein (ThiI)
AL552_11760	PF02926	THUMP domain
AL552_11765	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_11765	PF03466	LysR substrate binding domain
AL552_11770	PF01738	Dienelactone hydrolase family
AL552_11775	PF04241	AL552_11775
AL552_11780	PF01728	FtsJ-like methyltransferase
AL552_11785	PF01367	5'-3' exonuclease, C-terminal SAM fold
AL552_11785	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
AL552_11790	PF03641	Possible lysine decarboxylase
AL552_11790	PF11892	Domain of unknown function (DUF3412)
AL552_11790	PF14793	Domain of unknown function (DUF4478)
AL552_11795	PF00990	GGDEF domain
AL552_11805	PF14489	QueF-like protein
AL552_11805	PF14819	Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
AL552_11810	PF07348	Syd protein (SUKH-2)
AL552_11815	PF10071	AL552_11815
AL552_11820	PF03180	NLPA lipoprotein
AL552_11825	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_11830	PF00005	ABC transporter
AL552_11830	PF09383	NIL domain
AL552_11835	PF13242	HAD-hyrolase-like
AL552_11840	PF00356	Bacterial regulatory proteins, lacI family
AL552_11840	PF13377	Periplasmic binding protein-like domain
AL552_11845	PF00367	phosphotransferase system, EIIB
AL552_11845	PF02378	Phosphotransferase system, EIIC
AL552_11850	PF00128	Alpha amylase, catalytic domain
AL552_11850	PF16657	AL552_11850
AL552_11860	PF00486	Transcriptional regulatory protein, C terminal
AL552_11865	PF02588	AL552_11865
AL552_11870	PF00464	Serine hydroxymethyltransferase
AL552_11880	PF04055	Radical SAM superfamily
AL552_11880	PF16881	AL552_11880
AL552_11885	PF03099	Biotin/lipoate A/B protein ligase family
AL552_11890	PF04359	Protein of unknown function (DUF493)
AL552_11895	PF00768	D-alanyl-D-alanine carboxypeptidase
AL552_11895	PF07943	Penicillin-binding protein 5, C-terminal domain
AL552_11900	PF03330	Rare lipoprotein A (RlpA)-like double-psi beta-barrel
AL552_11900	PF05036	Sporulation related domain
AL552_11905	PF01098	AL552_11905
AL552_11910	PF00905	Penicillin binding protein transpeptidase domain
AL552_11910	PF03717	Penicillin-binding Protein dimerisation domain
AL552_11915	PF02590	Predicted SPOUT methyltransferase
AL552_11920	PF02410	Oligomerisation domain
AL552_11930	PF04390	Lipopolysaccharide-assembly
AL552_11935	PF00133	tRNA synthetases class I (I, L, M and V)
AL552_11935	PF08264	Anticodon-binding domain of tRNA
AL552_11935	PF13603	Leucyl-tRNA synthetase, Domain 2
AL552_11940	PF07295	AL552_11940
AL552_11945	PF00795	Carbon-nitrogen hydrolase
AL552_11950	PF00571	CBS domain
AL552_11950	PF03471	Transporter associated domain
AL552_11955	PF02130	Uncharacterized protein family UPF0054
AL552_11960	PF02562	PhoH-like protein
AL552_11965	PF00919	Uncharacterized protein family UPF0004
AL552_11965	PF01938	TRAM domain
AL552_11965	PF04055	Radical SAM superfamily
AL552_11975	PF01494	FAD binding domain
AL552_12085	PF01926	50S ribosome-binding GTPase
AL552_12085	PF06071	Protein of unknown function (DUF933)
AL552_12090	PF01195	Peptidyl-tRNA hydrolase
AL552_12095	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
AL552_12095	PF14572	Phosphoribosyl synthetase-associated domain
AL552_12100	PF00288	GHMP kinases N terminal domain
AL552_12100	PF08544	GHMP kinases C terminal
AL552_12105	PF03550	Outer membrane lipoprotein LolB
AL552_12110	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
AL552_12110	PF01488	Shikimate / quinate 5-dehydrogenase
AL552_12110	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
AL552_12115	PF00472	RF-1 domain
AL552_12115	PF03462	PCRF domain
AL552_12120	PF13847	Methyltransferase domain
AL552_12125	PF04247	AL552_12125
AL552_12130	PF13369	AL552_12130
AL552_12130	PF13371	Tetratricopeptide repeat
AL552_12135	PF00793	DAHP synthetase I family
AL552_12140	PF00149	Calcineurin-like phosphoesterase
AL552_12140	PF02872	5'-nucleotidase, C-terminal domain
AL552_12145	PF04073	Aminoacyl-tRNA editing domain
AL552_12150	PF00849	RNA pseudouridylate synthase
AL552_12150	PF01479	S4 domain
AL552_12155	PF01713	Smr domain
AL552_12160	PF11346	AL552_12160
AL552_12175	PF01963	AL552_12175
AL552_12180	PF00728	Glycosyl hydrolase family 20, catalytic domain
AL552_12180	PF02838	Glycosyl hydrolase family 20, domain 2
AL552_12180	PF03173	Putative carbohydrate binding domain
AL552_12180	PF03174	Chitobiase/beta-hexosaminidase C-terminal domain
AL552_12185	PF06178	Oligogalacturonate-specific porin protein (KdgM)
AL552_12190	PF04214	AL552_12190
AL552_12195	PF00122	E1-E2 ATPase
AL552_12195	PF00403	Heavy-metal-associated domain
AL552_12195	PF00702	haloacid dehalogenase-like hydrolase
AL552_12210	PF13609	Gram-negative porin
AL552_12215	PF09829	AL552_12215
AL552_12220	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AL552_12225	PF00691	OmpA family
AL552_12225	PF01389	OmpA-like transmembrane domain
AL552_12240	PF16538	AL552_12240
AL552_12240	PF16539	AL552_12240
AL552_12240	PF16548	AL552_12240
AL552_12250	PF02169	LPP20 lipoprotein
AL552_12255	PF05130	FlgN protein
AL552_12260	PF04316	Anti-sigma-28 factor, FlgM
AL552_12265	PF13144	SAF-like
AL552_12270	PF00072	Response regulator receiver domain
AL552_12270	PF01584	CheW-like domain
AL552_12275	PF01739	CheR methyltransferase, SAM binding domain
AL552_12275	PF03705	CheR methyltransferase, all-alpha domain
AL552_12285	PF00460	Flagella basal body rod protein
AL552_12285	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL552_12290	PF03963	AL552_12290
AL552_12290	PF13860	FlgD Ig-like domain
AL552_12290	PF13861	FlgD Tudor-like domain
AL552_12295	PF00460	Flagella basal body rod protein
AL552_12295	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL552_12295	PF07559	Flagellar basal body protein FlaE
AL552_12300	PF00460	Flagella basal body rod protein
AL552_12300	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL552_12305	PF00460	Flagella basal body rod protein
AL552_12305	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL552_12310	PF02107	AL552_12310
AL552_12315	PF02119	AL552_12315
AL552_12320	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AL552_12320	PF10135	AL552_12320
AL552_12330	PF00669	Bacterial flagellin N-terminal helical region
AL552_12335	PF00669	Bacterial flagellin N-terminal helical region
AL552_12335	PF00700	Bacterial flagellin C-terminal helical region
AL552_12335	PF07196	Flagellin hook IN motif
AL552_12350	PF00669	Bacterial flagellin N-terminal helical region
AL552_12350	PF00700	Bacterial flagellin C-terminal helical region
AL552_12350	PF07196	Flagellin hook IN motif
AL552_12355	PF00669	Bacterial flagellin N-terminal helical region
AL552_12355	PF00700	Bacterial flagellin C-terminal helical region
AL552_12355	PF07196	Flagellin hook IN motif
AL552_12360	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
AL552_12365	PF00391	PEP-utilising enzyme, mobile domain
AL552_12365	PF02896	PEP-utilising enzyme, TIM barrel domain
AL552_12365	PF05524	PEP-utilising enzyme, N-terminal
AL552_12370	PF00381	PTS HPr component phosphorylation site
AL552_12380	PF00291	Pyridoxal-phosphate dependent enzyme
AL552_12385	PF07264	Etoposide-induced protein 2
AL552_12390	PF04354	ZipA, C-terminal FtsZ-binding domain
AL552_12415	PF01957	NfeD-like C-terminal, partner-binding
AL552_12420	PF01145	SPFH domain / Band 7 family
AL552_12420	PF16200	AL552_12420
AL552_12425	PF00085	Thioredoxin
AL552_12425	PF14559	Tetratricopeptide repeat
AL552_12425	PF14561	Tetratricopeptide repeat
AL552_12435	PF00106	short chain dehydrogenase
AL552_12440	PF01370	NAD dependent epimerase/dehydratase family
AL552_12440	PF08338	Domain of unknown function (DUF1731)
AL552_12445	PF07556	AL552_12445
AL552_12450	PF07556	AL552_12450
AL552_12460	PF00571	CBS domain
AL552_12470	PF12850	Calcineurin-like phosphoesterase superfamily domain
AL552_12475	PF10262	Rdx family
AL552_12480	PF01925	AL552_12480
AL552_12485	PF17323	AL552_12485
AL552_12490	PF00486	Transcriptional regulatory protein, C terminal
AL552_12495	PF00183	Hsp90 protein
AL552_12495	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_12500	PF00406	Adenylate kinase
AL552_12500	PF05191	Adenylate kinase, active site lid
AL552_12505	PF00762	Ferrochelatase
AL552_12510	PF00854	POT family
AL552_12515	PF02357	Transcription termination factor nusG
AL552_12520	PF00733	Asparagine synthase
AL552_12520	PF13537	Glutamine amidotransferase domain
AL552_12525	PF00999	Sodium/hydrogen exchanger family
AL552_12525	PF02254	TrkA-N domain
AL552_12530	PF00480	ROK family
AL552_12535	PF01979	Amidohydrolase family
AL552_12550	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AL552_12550	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
AL552_12555	PF01475	Ferric uptake regulator family
AL552_12560	PF14539	Domain of unknown function (DUF4442)
AL552_12565	PF00258	Flavodoxin
AL552_12570	PF10981	AL552_12570
AL552_12575	PF00561	alpha/beta hydrolase fold
AL552_12580	PF03925	SeqA protein
AL552_12580	PF17206	AL552_12580
AL552_12585	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL552_12585	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL552_12585	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL552_12585	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL552_12590	PF08907	AL552_12590
AL552_12595	PF01784	NIF3 (NGG1p interacting factor 3)
AL552_12600	PF00285	Citrate synthase
AL552_12605	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
AL552_12615	PF00890	FAD binding domain
AL552_12615	PF02910	Fumarate reductase flavoprotein C-term
AL552_12620	PF13085	2Fe-2S iron-sulfur cluster binding domain
AL552_12620	PF13534	4Fe-4S dicluster domain
AL552_12625	PF00676	Dehydrogenase E1 component
AL552_12625	PF02779	Transketolase, pyrimidine binding domain
AL552_12625	PF16078	AL552_12625
AL552_12625	PF16870	AL552_12625
AL552_12630	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AL552_12630	PF00364	Biotin-requiring enzyme
AL552_12630	PF02817	e3 binding domain
AL552_12635	PF00549	CoA-ligase
AL552_12635	PF08442	ATP-grasp domain
AL552_12640	PF00549	CoA-ligase
AL552_12640	PF02629	CoA binding domain
AL552_12645	PF00950	AL552_12645
AL552_12655	PF01297	Periplasmic solute binding protein family
AL552_12660	PF12833	Helix-turn-helix domain
AL552_12670	PF04023	FeoA domain
AL552_12675	PF02421	Ferrous iron transport protein B
AL552_12675	PF07664	AL552_12675
AL552_12675	PF07670	Nucleoside recognition
AL552_12680	PF09012	FeoC like transcriptional regulator
AL552_12685	PF01230	HIT domain
AL552_12690	PF00750	tRNA synthetases class I (R)
AL552_12690	PF03485	Arginyl tRNA synthetase N terminal domain
AL552_12690	PF05746	DALR anticodon binding domain
AL552_12700	PF06185	YecM protein
AL552_12705	PF00551	Formyl transferase
AL552_12705	PF01842	ACT domain
AL552_12715	PF00814	Glycoprotease family
AL552_12730	PF00561	alpha/beta hydrolase fold
AL552_12740	PF00570	HRDC domain
AL552_12740	PF01612	3'-5' exonuclease
AL552_12745	PF03776	Septum formation topological specificity factor MinE
AL552_12750	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
AL552_12755	PF03775	Septum formation inhibitor MinC, C-terminal domain
AL552_12755	PF05209	Septum formation inhibitor MinC, N-terminal domain
AL552_12760	PF05166	YcgL domain
AL552_12765	PF13406	Transglycosylase SLT domain
AL552_12770	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_12770	PF03466	LysR substrate binding domain
AL552_12775	PF01773	Na+ dependent nucleoside transporter N-terminus
AL552_12775	PF07662	Na+ dependent nucleoside transporter C-terminus
AL552_12775	PF07670	Nucleoside recognition
AL552_12780	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
AL552_12780	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
AL552_12790	PF13395	HNH endonuclease
AL552_12790	PF13489	Methyltransferase domain
AL552_12795	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL552_12795	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL552_12800	PF13561	Enoyl-(Acyl carrier protein) reductase
AL552_12805	PF07977	FabA-like domain
AL552_12810	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL552_12810	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL552_12815	PF11659	AL552_12815
AL552_12820	PF03176	MMPL family
AL552_12825	PF03548	Outer membrane lipoprotein carrier protein LolA
AL552_12830	PF13279	Thioesterase-like superfamily
AL552_12835	PF00221	Aromatic amino acid lyase
AL552_12840	PF00535	Glycosyl transferase family 2
AL552_12840	PF03279	AL552_12840
AL552_12850	PF00501	AMP-binding enzyme
AL552_12850	PF13193	AMP-binding enzyme C-terminal domain
AL552_12855	PF04279	AL552_12855
AL552_12860	PF00550	Phosphopantetheine attachment site
AL552_12865	PF00550	Phosphopantetheine attachment site
AL552_12870	PF01553	Acyltransferase
AL552_12875	PF13723	AL552_12875
AL552_12885	PF00891	O-methyltransferase
AL552_12890	PF01494	FAD binding domain
AL552_12895	PF01464	Transglycosylase SLT domain
AL552_12900	PF01595	AL552_12900
AL552_12900	PF03471	Transporter associated domain
AL552_12905	PF00270	DEAD/DEAH box helicase
AL552_12905	PF00271	Helicase conserved C-terminal domain
AL552_12910	PF02080	TrkA-C domain
AL552_12910	PF02254	TrkA-N domain
AL552_12915	PF02386	Cation transport protein
AL552_12920	PF05547	AL552_12920
AL552_12930	PF02696	AL552_12930
AL552_12935	PF03480	Bacterial extracellular solute-binding protein, family 7
AL552_12940	PF04290	AL552_12940
AL552_12945	PF06808	AL552_12945
AL552_12955	PF00072	Response regulator receiver domain
AL552_12955	PF00158	Sigma-54 interaction domain
AL552_12955	PF02954	Bacterial regulatory protein, Fis family
AL552_12960	PF00512	His Kinase A (phospho-acceptor) domain
AL552_12960	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_12960	PF02743	Cache domain
AL552_12970	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL552_12970	PF05697	Bacterial trigger factor protein (TF)
AL552_12970	PF05698	Bacterial trigger factor protein (TF) C-terminus
AL552_12975	PF00574	Clp protease
AL552_12980	PF06689	ClpX C4-type zinc finger
AL552_12980	PF07724	AAA domain (Cdc48 subfamily)
AL552_12980	PF10431	C-terminal, D2-small domain, of ClpB protein
AL552_12985	PF00004	ATPase family associated with various cellular activities (AAA)
AL552_12985	PF02190	ATP-dependent protease La (LON) domain
AL552_12985	PF05362	Lon protease (S16) C-terminal proteolytic domain
AL552_12990	PF00216	Bacterial DNA-binding protein
AL552_12995	PF13616	PPIC-type PPIASE domain
AL552_12995	PF13624	SurA N-terminal domain
AL552_13000	PF12836	Helix-hairpin-helix motif
AL552_13005	PF01694	Rhomboid family
AL552_13010	PF03942	AL552_13010
AL552_13015	PF01966	HD domain
AL552_13015	PF13286	Phosphohydrolase-associated domain
AL552_13020	PF13023	HD domain
AL552_13025	PF00155	Aminotransferase class I and II
AL552_13030	PF00425	chorismate binding enzyme
AL552_13035	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL552_13035	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL552_13035	PF16582	AL552_13035
AL552_13040	PF12697	Alpha/beta hydrolase family
AL552_13045	PF00378	Enoyl-CoA hydratase/isomerase family
AL552_13050	PF13378	Enolase C-terminal domain-like
AL552_13055	PF00501	AMP-binding enzyme
AL552_13065	PF03601	AL552_13065
AL552_13070	PF01553	Acyltransferase
AL552_13070	PF07690	Major Facilitator Superfamily
AL552_13075	PF13305	WHG domain
AL552_13080	PF04280	Tim44-like domain
AL552_13120	PF16576	AL552_13120
AL552_13125	PF00873	AcrB/AcrD/AcrF family
AL552_13135	PF13505	Outer membrane protein beta-barrel domain
AL552_13140	PF06844	Protein of unknown function (DUF1244)
AL552_13145	PF00291	Pyridoxal-phosphate dependent enzyme
AL552_13150	PF01037	AsnC family
AL552_13150	PF13412	Winged helix-turn-helix DNA-binding
AL552_13160	PF13622	Thioesterase-like superfamily
AL552_13165	PF09619	Type III secretion system lipoprotein chaperone (YscW)
AL552_13170	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AL552_13180	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL552_13180	PF00990	GGDEF domain
AL552_13190	PF00588	SpoU rRNA Methylase family
AL552_13195	PF00571	CBS domain
AL552_13200	PF00122	E1-E2 ATPase
AL552_13200	PF00403	Heavy-metal-associated domain
AL552_13200	PF00702	haloacid dehalogenase-like hydrolase
AL552_13205	PF01048	Phosphorylase superfamily
AL552_13210	PF09002	Domain of unknown function (DUF1887)
AL552_13215	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL552_13225	PF01230	HIT domain
AL552_13235	PF07233	Protein of unknown function (DUF1425)
AL552_13240	PF13036	Protein of unknown function (DUF3897)
AL552_13245	PF01636	Phosphotransferase enzyme family
AL552_13250	PF05728	Uncharacterised protein family (UPF0227)
AL552_13255	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL552_13260	PF13302	Acetyltransferase (GNAT) domain
AL552_13265	PF10972	AL552_13265
AL552_13270	PF00270	DEAD/DEAH box helicase
AL552_13270	PF00271	Helicase conserved C-terminal domain
AL552_13270	PF02559	CarD-like/TRCF domain
AL552_13270	PF03461	TRCF domain
AL552_13280	PF02687	AL552_13280
AL552_13280	PF12704	MacB-like periplasmic core domain
AL552_13285	PF00005	ABC transporter
AL552_13290	PF02687	AL552_13290
AL552_13290	PF12704	MacB-like periplasmic core domain
AL552_13295	PF09835	AL552_13295
AL552_13300	PF00753	Metallo-beta-lactamase superfamily
AL552_13300	PF03772	AL552_13300
AL552_13305	PF00005	ABC transporter
AL552_13305	PF00664	ABC transporter transmembrane region
AL552_13310	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
AL552_13315	PF03966	Trm112p-like protein
AL552_13320	PF02348	Cytidylyltransferase
AL552_13325	PF04293	AL552_13325
AL552_13330	PF04285	AL552_13330
AL552_13335	PF06798	AL552_13335
AL552_13335	PF08298	PrkA AAA domain
AL552_13345	PF03887	YfbU domain
AL552_13350	PF01891	Cobalt uptake substrate-specific transmembrane region
AL552_13355	PF04055	Radical SAM superfamily
AL552_13355	PF13353	4Fe-4S single cluster domain
AL552_13360	PF09982	Uncharacterized protein conserved in bacteria (DUF2219)
AL552_13365	PF01228	Glycine radical
AL552_13365	PF02901	Pyruvate formate lyase
AL552_13370	PF11840	AL552_13370
AL552_13385	PF00005	ABC transporter
AL552_13390	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL552_13395	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_13400	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_13405	PF17291	AL552_13405
AL552_13410	PF03372	Endonuclease/Exonuclease/phosphatase family
AL552_13415	PF10689	AL552_13415
AL552_13420	PF07445	Primosomal replication protein priB and priC
AL552_13425	PF01925	AL552_13425
AL552_13435	PF13609	Gram-negative porin
AL552_13440	PF09829	AL552_13440
AL552_13445	PF00849	RNA pseudouridylate synthase
AL552_13450	PF03971	Monomeric isocitrate dehydrogenase
AL552_13455	PF00313	'Cold-shock' DNA-binding domain
AL552_13460	PF02617	ATP-dependent Clp protease adaptor protein ClpS
AL552_13465	PF00004	ATPase family associated with various cellular activities (AAA)
AL552_13465	PF02861	Clp amino terminal domain
AL552_13465	PF07724	AAA domain (Cdc48 subfamily)
AL552_13465	PF10431	C-terminal, D2-small domain, of ClpB protein
AL552_13470	PF01176	Translation initiation factor 1A / IF-1
AL552_13475	PF04376	AL552_13475
AL552_13475	PF04377	AL552_13475
AL552_13485	PF05433	AL552_13485
AL552_13490	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AL552_13495	PF10692	Protein of unknown function (DUF2498)
AL552_13500	PF01131	DNA topoisomerase
AL552_13500	PF01396	AL552_13500
AL552_13500	PF01751	Toprim domain
AL552_13500	PF08272	Topoisomerase I zinc-ribbon-like
AL552_13505	PF00483	Nucleotidyl transferase
AL552_13510	PF00534	Glycosyl transferases group 1
AL552_13510	PF08323	Starch synthase catalytic domain
AL552_13515	PF00561	alpha/beta hydrolase fold
AL552_13525	PF09335	AL552_13525
AL552_13530	PF04993	TfoX N-terminal domain
AL552_13530	PF04994	TfoX C-terminal domain
AL552_13535	PF00356	Bacterial regulatory proteins, lacI family
AL552_13535	PF13377	Periplasmic binding protein-like domain
AL552_13540	PF02613	Nitrate reductase delta subunit
AL552_13545	PF00072	Response regulator receiver domain
AL552_13545	PF00486	Transcriptional regulatory protein, C terminal
AL552_13550	PF02698	DUF218 domain
AL552_13555	PF08241	Methyltransferase domain
AL552_13560	PF03882	KicB killing factor
AL552_13560	PF17192	AL552_13560
AL552_13560	PF17193	AL552_13560
AL552_13565	PF04288	MukE-like family
AL552_13570	PF04310	MukB N-terminal
AL552_13570	PF13558	Putative exonuclease SbcCD, C subunit
AL552_13570	PF16330	AL552_13570
AL552_13580	PF14397	AL552_13580
AL552_13585	PF14400	AL552_13585
AL552_13585	PF14402	AL552_13585
AL552_13590	PF05618	Putative ATP-dependant zinc protease
AL552_13600	PF08003	Protein of unknown function (DUF1698)
AL552_13605	PF13649	Methyltransferase domain
AL552_13610	PF01904	Protein of unknown function DUF72
AL552_13615	PF00152	tRNA synthetases class II (D, K and N)
AL552_13615	PF01336	OB-fold nucleic acid binding domain
AL552_13615	PF02938	GAD domain
AL552_13620	PF01709	Transcriptional regulator
AL552_13625	PF02075	Crossover junction endodeoxyribonuclease RuvC
AL552_13630	PF01330	RuvA N terminal domain
AL552_13630	PF07499	RuvA, C-terminal domain
AL552_13630	PF14520	Helix-hairpin-helix domain
AL552_13635	PF05491	Holliday junction DNA helicase ruvB C-terminus
AL552_13635	PF05496	Holliday junction DNA helicase ruvB N-terminus
AL552_13640	PF01654	AL552_13640
AL552_13645	PF02322	AL552_13645
AL552_13650	PF08173	AL552_13650
AL552_13655	PF09600	AL552_13655
AL552_13660	PF03061	Thioesterase superfamily
AL552_13665	PF01618	AL552_13665
AL552_13670	PF02472	Biopolymer transport protein ExbD/TolR
AL552_13675	PF06519	TolA C-terminal
AL552_13680	PF04052	TolB amino-terminal domain
AL552_13680	PF07676	WD40-like Beta Propeller Repeat
AL552_13685	PF00691	OmpA family
AL552_13690	PF13174	Tetratricopeptide repeat
AL552_13690	PF13432	Tetratricopeptide repeat
AL552_13690	PF16331	AL552_13690
AL552_13695	PF02445	Quinolinate synthetase A protein
AL552_13705	PF03994	AL552_13705
AL552_13720	PF03695	Uncharacterised protein family (UPF0149)
AL552_13725	PF00072	Response regulator receiver domain
AL552_13725	PF00512	His Kinase A (phospho-acceptor) domain
AL552_13725	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_13730	PF06610	AL552_13730
AL552_13740	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL552_13740	PF00672	HAMP domain
AL552_13745	PF16576	AL552_13745
AL552_13750	PF00873	AcrB/AcrD/AcrF family
AL552_13760	PF03547	AL552_13760
AL552_13765	PF00579	tRNA synthetases class I (W and Y)
AL552_13775	PF03372	Endonuclease/Exonuclease/phosphatase family
AL552_13785	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL552_13785	PF12729	AL552_13785
AL552_13790	PF06175	tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)
AL552_13800	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_13800	PF03466	LysR substrate binding domain
AL552_13805	PF13679	AL552_13805
AL552_13810	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
AL552_13810	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
AL552_13815	PF01037	AsnC family
AL552_13815	PF13412	Winged helix-turn-helix DNA-binding
AL552_13820	PF01580	FtsK/SpoIIIE family
AL552_13820	PF09397	Ftsk gamma domain
AL552_13820	PF13491	AL552_13820
AL552_13825	PF03548	Outer membrane lipoprotein carrier protein LolA
AL552_13830	PF00004	ATPase family associated with various cellular activities (AAA)
AL552_13830	PF12002	MgsA AAA+ ATPase C terminal
AL552_13830	PF16193	AL552_13830
AL552_13835	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AL552_13835	PF02403	Seryl-tRNA synthetase N-terminal domain
AL552_13850	PF00202	Aminotransferase class-III
AL552_13855	PF04055	Radical SAM superfamily
AL552_13855	PF06968	Biotin and Thiamin Synthesis associated domain
AL552_13860	PF00155	Aminotransferase class I and II
AL552_13865	PF08241	Methyltransferase domain
AL552_13870	PF13500	AAA domain
AL552_13880	PF01435	Peptidase family M48
AL552_13885	PF12680	SnoaL-like domain
AL552_13890	PF00106	short chain dehydrogenase
AL552_13895	PF01593	Flavin containing amine oxidoreductase
AL552_13900	PF07103	AL552_13900
AL552_13905	PF02353	Mycolic acid cyclopropane synthetase
AL552_13910	PF11086	AL552_13910
AL552_13915	PF16036	AL552_13915
AL552_13920	PF12915	AL552_13920
AL552_13925	PF00206	Lyase
AL552_13925	PF08328	Adenylosuccinate lyase C-terminal
AL552_13930	PF04356	Protein of unknown function (DUF489)
AL552_13935	PF03054	tRNA methyl transferase
AL552_13945	PF00294	pfkB family carbohydrate kinase
AL552_13950	PF00816	H-NS histone family
AL552_13955	PF03553	AL552_13955
AL552_13960	PF00158	Sigma-54 interaction domain
AL552_13960	PF02954	Bacterial regulatory protein, Fis family
AL552_13965	PF01634	ATP phosphoribosyltransferase
AL552_13965	PF08029	HisG, C-terminal domain
AL552_13970	PF00815	Histidinol dehydrogenase
AL552_13975	PF00155	Aminotransferase class I and II
AL552_13980	PF00475	Imidazoleglycerol-phosphate dehydratase
AL552_13980	PF08645	Polynucleotide kinase 3 phosphatase
AL552_13985	PF00117	Glutamine amidotransferase class-I
AL552_13990	PF00977	Histidine biosynthesis protein
AL552_13995	PF00977	Histidine biosynthesis protein
AL552_14000	PF01502	Phosphoribosyl-AMP cyclohydrolase
AL552_14000	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
AL552_14005	PF02810	SEC-C motif
AL552_14010	PF00563	EAL domain
AL552_14010	PF08668	HDOD domain
AL552_14015	PF00149	Calcineurin-like phosphoesterase
AL552_14020	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
AL552_14025	PF01406	tRNA synthetases class I (C) catalytic domain
AL552_14025	PF09190	DALR domain
AL552_14030	PF00265	Thymidine kinase
AL552_14035	PF02698	DUF218 domain
AL552_14040	PF01370	NAD dependent epimerase/dehydratase family
AL552_14045	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_14045	PF03466	LysR substrate binding domain
AL552_14050	PF05232	AL552_14050
AL552_14055	PF06146	AL552_14055
AL552_14060	PF01226	Formate/nitrite transporter
AL552_14070	PF03649	AL552_14070
AL552_14075	PF06796	AL552_14075
AL552_14080	PF03264	NapC/NirT cytochrome c family, N-terminal region
AL552_14085	PF00384	Molybdopterin oxidoreductase
AL552_14085	PF01568	Molydopterin dinucleotide binding domain
AL552_14090	PF02065	Melibiase
AL552_14095	PF11449	AL552_14095
AL552_14100	PF01368	DHH family
AL552_14100	PF02833	DHHA2 domain
AL552_14105	PF11042	AL552_14105
AL552_14110	PF00005	ABC transporter
AL552_14115	PF00005	ABC transporter
AL552_14115	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL552_14120	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_14120	PF12911	AL552_14120
AL552_14125	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_14130	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL552_14135	PF00158	Sigma-54 interaction domain
AL552_14135	PF02954	Bacterial regulatory protein, Fis family
AL552_14140	PF04012	AL552_14140
AL552_14145	PF06667	AL552_14145
AL552_14150	PF04024	AL552_14150
AL552_14155	PF16576	AL552_14155
AL552_14160	PF13437	HlyD family secretion protein
AL552_14160	PF13533	Biotin-lipoyl like
AL552_14165	PF00873	AcrB/AcrD/AcrF family
AL552_14170	PF03352	Methyladenine glycosylase
AL552_14175	PF03280	Proteobacterial lipase chaperone protein
AL552_14180	PF00561	alpha/beta hydrolase fold
AL552_14185	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL552_14190	PF13091	PLD-like domain
AL552_14190	PF13396	AL552_14190
AL552_14195	PF00209	Sodium:neurotransmitter symporter family
AL552_14200	PF00849	RNA pseudouridylate synthase
AL552_14205	PF10672	S-adenosylmethionine-dependent methyltransferase
AL552_14210	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL552_14210	PF00175	Oxidoreductase NAD-binding domain
AL552_14210	PF00970	Oxidoreductase FAD-binding domain
AL552_14215	PF03063	Prismane/CO dehydrogenase family
AL552_14220	PF00158	Sigma-54 interaction domain
AL552_14220	PF02954	Bacterial regulatory protein, Fis family
AL552_14230	PF05433	AL552_14230
AL552_14235	PF01066	CDP-alcohol phosphatidyltransferase
AL552_14240	PF00005	ABC transporter
AL552_14250	PF13416	Bacterial extracellular solute-binding protein
AL552_14255	PF03724	META domain
AL552_14260	PF06945	AL552_14260
AL552_14270	PF00149	Calcineurin-like phosphoesterase
AL552_14270	PF02872	5'-nucleotidase, C-terminal domain
AL552_14275	PF00583	Acetyltransferase (GNAT) family
AL552_14280	PF01386	Ribosomal L25p family
AL552_14290	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_14295	PF00072	Response regulator receiver domain
AL552_14295	PF00486	Transcriptional regulatory protein, C terminal
AL552_14305	PF00271	Helicase conserved C-terminal domain
AL552_14305	PF04851	Type III restriction enzyme, res subunit
AL552_14310	PF00849	RNA pseudouridylate synthase
AL552_14310	PF01479	S4 domain
AL552_14320	PF07690	Major Facilitator Superfamily
AL552_14325	PF11140	AL552_14325
AL552_14330	PF11854	AL552_14330
AL552_14335	PF09699	Doubled CXXCH motif (Paired_CXXCH_1)
AL552_14340	PF14522	Cytochrome c7
AL552_14345	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
AL552_14350	PF03264	NapC/NirT cytochrome c family, N-terminal region
AL552_14355	PF11066	AL552_14355
AL552_14355	PF13460	NADH(P)-binding
AL552_14360	PF01554	MatE
AL552_14365	PF00005	ABC transporter
AL552_14370	PF02687	AL552_14370
AL552_14370	PF12704	MacB-like periplasmic core domain
AL552_14375	PF07143	Hydroxyneurosporene synthase (CrtC)
AL552_14375	PF17186	AL552_14375
AL552_14380	PF06965	Na+/H+ antiporter 1
AL552_14385	PF00440	Bacterial regulatory proteins, tetR family
AL552_14390	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL552_14390	PF02770	Acyl-CoA dehydrogenase, middle domain
AL552_14390	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL552_14390	PF09317	AL552_14390
AL552_14395	PF07055	Enoyl reductase FAD binding domain
AL552_14395	PF12241	Trans-2-enoyl-CoA reductase catalytic region
AL552_14395	PF12242	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
AL552_14400	PF02080	TrkA-C domain
AL552_14400	PF06826	AL552_14400
AL552_14405	PF00462	Glutaredoxin
AL552_14420	PF00465	Iron-containing alcohol dehydrogenase
AL552_14425	PF01380	SIS domain
AL552_14425	PF01418	Helix-turn-helix domain, rpiR family
AL552_14430	PF00282	Pyridoxal-dependent decarboxylase conserved domain
AL552_14440	PF03956	AL552_14440
AL552_14445	PF08668	HDOD domain
AL552_14455	PF04993	TfoX N-terminal domain
AL552_14455	PF04994	TfoX C-terminal domain
AL552_14465	PF00072	Response regulator receiver domain
AL552_14470	PF00027	Cyclic nucleotide-binding domain
AL552_14470	PF00512	His Kinase A (phospho-acceptor) domain
AL552_14470	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_14475	PF06097	AL552_14475
AL552_14480	PF00266	Aminotransferase class-V
AL552_14485	PF00291	Pyridoxal-phosphate dependent enzyme
AL552_14490	PF00005	ABC transporter
AL552_14490	PF00664	ABC transporter transmembrane region
AL552_14495	PF00005	ABC transporter
AL552_14495	PF00664	ABC transporter transmembrane region
AL552_14500	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL552_14505	PF10014	2OG-Fe dioxygenase
AL552_14510	PF00266	Aminotransferase class-V
AL552_14515	PF10977	AL552_14515
AL552_14525	PF00939	Sodium:sulfate symporter transmembrane region
AL552_14530	PF02698	DUF218 domain
AL552_14535	PF00390	Malic enzyme, N-terminal domain
AL552_14535	PF03949	Malic enzyme, NAD binding domain
AL552_14550	PF09423	PhoD-like phosphatase
AL552_14550	PF16655	AL552_14550
AL552_14555	PF01259	SAICAR synthetase
AL552_14560	PF03846	Cell division inhibitor SulA
AL552_14575	PF00691	OmpA family
AL552_14575	PF13488	AL552_14575
AL552_14580	PF10979	AL552_14580
AL552_14585	PF11813	AL552_14585
AL552_14590	PF01565	FAD binding domain
AL552_14590	PF02913	FAD linked oxidases, C-terminal domain
AL552_14590	PF13183	4Fe-4S dicluster domain
AL552_14595	PF04191	Phospholipid methyltransferase
AL552_14600	PF12119	AL552_14600
AL552_14605	PF00221	Aromatic amino acid lyase
AL552_14610	PF01175	Urocanase
AL552_14610	PF17391	AL552_14610
AL552_14610	PF17392	AL552_14610
AL552_14615	PF00491	Arginase family
AL552_14620	PF01979	Amidohydrolase family
AL552_14625	PF00392	Bacterial regulatory proteins, gntR family
AL552_14625	PF07702	UTRA domain
AL552_14630	PF07070	AL552_14630
AL552_14635	PF11383	AL552_14635
AL552_14640	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AL552_14640	PF02824	TGS domain
AL552_14640	PF03129	Anticodon binding domain
AL552_14640	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AL552_14650	PF01632	Ribosomal protein L35
AL552_14655	PF00453	Ribosomal protein L20
AL552_14660	PF01906	Putative heavy-metal-binding
AL552_14665	PF13443	Cro/C1-type HTH DNA-binding domain
AL552_14670	PF00440	Bacterial regulatory proteins, tetR family
AL552_14675	PF03176	MMPL family
AL552_14680	PF17131	AL552_14680
AL552_14690	PF01409	tRNA synthetases class II core domain (F)
AL552_14690	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
AL552_14695	PF01588	Putative tRNA binding domain
AL552_14695	PF03147	Ferredoxin-fold anticodon binding domain
AL552_14695	PF03483	B3/4 domain
AL552_14695	PF03484	tRNA synthetase B5 domain
AL552_14700	PF03547	AL552_14700
AL552_14705	PF00216	Bacterial DNA-binding protein
AL552_14715	PF05724	Thiopurine S-methyltransferase (TPMT)
AL552_14720	PF01370	NAD dependent epimerase/dehydratase family
AL552_14720	PF02222	ATP-grasp domain
AL552_14725	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AL552_14725	PF08211	Cytidine and deoxycytidylate deaminase zinc-binding region
AL552_14730	PF04172	AL552_14730
AL552_14735	PF03788	AL552_14735
AL552_14740	PF00929	Exonuclease
AL552_14740	PF08411	Exonuclease C-terminal
AL552_14745	PF00375	Sodium:dicarboxylate symporter family
AL552_14750	PF08732	AL552_14750
AL552_14755	PF02277	Phosphoribosyltransferase
AL552_14760	PF02654	AL552_14760
AL552_14765	PF02283	Cobinamide kinase / cobinamide phosphate guanyltransferase
AL552_14775	PF01432	Peptidase family M3
AL552_14775	PF08439	Oligopeptidase F
AL552_14780	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AL552_14785	PF01032	FecCD transport family
AL552_14790	PF00005	ABC transporter
AL552_14795	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
AL552_14800	PF07209	AL552_14800
AL552_14805	PF07690	Major Facilitator Superfamily
AL552_14810	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_14810	PF03466	LysR substrate binding domain
AL552_14815	PF00462	Glutaredoxin
AL552_14820	PF01863	Protein of unknown function DUF45
AL552_14825	PF05971	Protein of unknown function (DUF890)
AL552_14835	PF03572	Peptidase family S41
AL552_14845	PF00392	Bacterial regulatory proteins, gntR family
AL552_14845	PF07729	FCD domain
AL552_14850	PF00171	Aldehyde dehydrogenase family
AL552_14855	PF05544	Proline racemase
AL552_14860	PF01266	FAD dependent oxidoreductase
AL552_14865	PF13416	Bacterial extracellular solute-binding protein
AL552_14870	PF02423	Ornithine cyclodeaminase/mu-crystallin family
AL552_14875	PF00701	Dihydrodipicolinate synthetase family
AL552_14880	PF00005	ABC transporter
AL552_14880	PF08402	TOBE domain
AL552_14890	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_14900	PF00801	PKD domain
AL552_14900	PF01752	Collagenase
AL552_14900	PF08453	Peptidase family M9 N-terminal
AL552_14905	PF00557	Metallopeptidase family M24
AL552_14905	PF01321	Creatinase/Prolidase N-terminal domain
AL552_14905	PF16188	AL552_14905
AL552_14905	PF16189	AL552_14905
AL552_14910	PF00005	ABC transporter
AL552_14910	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL552_14915	PF00005	ABC transporter
AL552_14915	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL552_14920	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_14920	PF12911	AL552_14920
AL552_14925	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_14935	PF01546	Peptidase family M20/M25/M40
AL552_14935	PF07687	Peptidase dimerisation domain
AL552_14940	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL552_14940	PF14696	Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal
AL552_14945	PF04209	homogentisate 1,2-dioxygenase
AL552_14950	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL552_14955	PF13417	Glutathione S-transferase, N-terminal domain
AL552_14960	PF10881	AL552_14960
AL552_14980	PF03692	AL552_14980
AL552_14985	PF11695	AL552_14985
AL552_14990	PF00563	EAL domain
AL552_14995	PF00892	EamA-like transporter family
AL552_15000	PF01047	MarR family
AL552_15005	PF04237	YjbR
AL552_15010	PF06127	AL552_15010
AL552_15020	PF12464	Maltose acetyltransferase
AL552_15020	PF14602	Hexapeptide repeat of succinyl-transferase
AL552_15035	PF00072	Response regulator receiver domain
AL552_15035	PF00512	His Kinase A (phospho-acceptor) domain
AL552_15035	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_15040	PF00563	EAL domain
AL552_15040	PF00990	GGDEF domain
AL552_15050	PF13431	Tetratricopeptide repeat
AL552_15050	PF14559	Tetratricopeptide repeat
AL552_15055	PF04204	Homoserine O-succinyltransferase
AL552_15065	PF00893	Small Multidrug Resistance protein
AL552_15070	PF13520	Amino acid permease
AL552_15075	PF03279	AL552_15075
AL552_15080	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
AL552_15085	PF01810	AL552_15085
AL552_15095	PF01235	AL552_15095
AL552_15115	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL552_15125	PF00884	Sulfatase
AL552_15130	PF00512	His Kinase A (phospho-acceptor) domain
AL552_15130	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_15130	PF08521	AL552_15130
AL552_15135	PF00072	Response regulator receiver domain
AL552_15135	PF00486	Transcriptional regulatory protein, C terminal
AL552_15140	PF13181	Tetratricopeptide repeat
AL552_15145	PF00106	short chain dehydrogenase
AL552_15150	PF14518	Iron-containing redox enzyme
AL552_15155	PF00501	AMP-binding enzyme
AL552_15160	PF12261	AL552_15160
AL552_15165	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
AL552_15170	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_15175	PF00005	ABC transporter
AL552_15175	PF00571	CBS domain
AL552_15180	PF00027	Cyclic nucleotide-binding domain
AL552_15180	PF00571	CBS domain
AL552_15180	PF03445	AL552_15180
AL552_15180	PF10335	AL552_15180
AL552_15185	PF00929	Exonuclease
AL552_15190	PF02028	BCCT family transporter
AL552_15195	PF00583	Acetyltransferase (GNAT) family
AL552_15200	PF00202	Aminotransferase class-III
AL552_15205	PF06339	AL552_15205
AL552_15210	PF00696	Amino acid kinase family
AL552_15220	PF12698	ABC-2 family transporter protein
AL552_15225	PF12698	ABC-2 family transporter protein
AL552_15230	PF16576	AL552_15230
AL552_15235	PF02321	Outer membrane efflux protein
AL552_15245	PF00989	PAS fold
AL552_15245	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_15245	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
AL552_15245	PF17203	AL552_15245
AL552_15250	PF00072	Response regulator receiver domain
AL552_15250	PF12431	AL552_15250
AL552_15255	PF00593	TonB dependent receptor
AL552_15255	PF07715	TonB-dependent Receptor Plug Domain
AL552_15260	PF12833	Helix-turn-helix domain
AL552_15260	PF14526	Integron-associated effector binding protein
AL552_15265	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
AL552_15265	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
AL552_15270	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
AL552_15275	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
AL552_15275	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL552_15300	PF00158	Sigma-54 interaction domain
AL552_15300	PF01590	GAF domain
AL552_15300	PF02954	Bacterial regulatory protein, Fis family
AL552_15305	PF00171	Aldehyde dehydrogenase family
AL552_15315	PF05932	Tir chaperone protein (CesT) family
AL552_15320	PF09619	Type III secretion system lipoprotein chaperone (YscW)
AL552_15325	PF12833	Helix-turn-helix domain
AL552_15330	PF16806	AL552_15330
AL552_15335	PF05932	Tir chaperone protein (CesT) family
AL552_15340	PF00263	AL552_15340
AL552_15340	PF03958	Bacterial type II/III secretion system short domain
AL552_15345	PF16693	AL552_15345
AL552_15345	PF16697	AL552_15345
AL552_15350	PF08988	Protein of unknown function (DUF1895)
AL552_15355	PF09392	Type III secretion needle MxiH like
AL552_15360	PF09477	Bacterial type II secretion system chaperone protein (type_III_yscG)
AL552_15365	PF09025	YopR Core
AL552_15370	PF17001	AL552_15370
AL552_15375	PF01514	Secretory protein of YscJ/FliF family
AL552_15380	PF06578	AL552_15380
AL552_15385	PF02108	AL552_15385
AL552_15390	PF05932	Tir chaperone protein (CesT) family
AL552_15395	PF02661	Fic/DOC family
AL552_15400	PF05932	Tir chaperone protein (CesT) family
AL552_15410	PF05932	Tir chaperone protein (CesT) family
AL552_15425	PF13561	Enoyl-(Acyl carrier protein) reductase
AL552_15430	PF01047	MarR family
AL552_15445	PF00440	Bacterial regulatory proteins, tetR family
AL552_15445	PF14246	AefR-like transcriptional repressor, C-terminal region
AL552_15450	PF01312	FlhB HrpN YscU SpaS Family
AL552_15455	PF01311	AL552_15455
AL552_15460	PF01313	AL552_15460
AL552_15465	PF00813	AL552_15465
AL552_15480	PF07321	Type III secretion protein YscO
AL552_15485	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL552_15485	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AL552_15490	PF07201	HrpJ-like domain
AL552_15495	PF09059	TyeA
AL552_15500	PF05932	Tir chaperone protein (CesT) family
AL552_15505	PF09474	AL552_15505
AL552_15510	PF14559	Tetratricopeptide repeat
AL552_15515	PF00771	FHIPEP family
AL552_15520	PF09621	AL552_15520
AL552_15525	PF07216	AL552_15525
AL552_15530	PF04792	V antigen (LcrV) protein
AL552_15535	PF07720	Tetratricopeptide repeat
AL552_15540	PF04888	AL552_15540
AL552_15545	PF05844	YopD protein
AL552_15555	PF16868	AL552_15555
AL552_15560	PF01925	AL552_15560
AL552_15570	PF01970	AL552_15570
AL552_15575	PF07331	AL552_15575
AL552_15580	PF03401	Tripartite tricarboxylate transporter family receptor
AL552_15585	PF04828	Glutathione-dependent formaldehyde-activating enzyme
AL552_15590	PF00392	Bacterial regulatory proteins, gntR family
AL552_15590	PF07729	FCD domain
AL552_15595	PF13714	Phosphoenolpyruvate phosphomutase
AL552_15600	PF00285	Citrate synthase
AL552_15605	PF00330	Aconitase family (aconitate hydratase)
AL552_15605	PF00694	Aconitase C-terminal domain
AL552_15610	PF04303	PrpF protein
AL552_15615	PF00501	AMP-binding enzyme
AL552_15615	PF13193	AMP-binding enzyme C-terminal domain
AL552_15615	PF16177	AL552_15615
AL552_15620	PF00583	Acetyltransferase (GNAT) family
AL552_15625	PF00089	Trypsin
AL552_15625	PF02839	Carbohydrate binding domain
AL552_15630	PF00293	NUDIX domain
AL552_15635	PF08282	haloacid dehalogenase-like hydrolase
AL552_15640	PF13394	4Fe-4S single cluster domain
AL552_15645	PF06508	Queuosine biosynthesis protein QueC
AL552_15650	PF00990	GGDEF domain
AL552_15650	PF13374	Tetratricopeptide repeat
AL552_15650	PF13424	Tetratricopeptide repeat
AL552_15655	PF11042	AL552_15655
AL552_15660	PF00691	OmpA family
AL552_15665	PF02321	Outer membrane efflux protein
AL552_15685	PF00691	OmpA family
AL552_15700	PF10672	S-adenosylmethionine-dependent methyltransferase
AL552_15705	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL552_15710	PF00708	Acylphosphatase
AL552_15715	PF04358	DsrC like protein
AL552_15730	PF01027	Inhibitor of apoptosis-promoting Bax1
AL552_15735	PF00005	ABC transporter
AL552_15740	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_15745	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_15750	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL552_15760	PF10414	Sirohaem synthase dimerisation region
AL552_15760	PF13241	Putative NAD(P)-binding
AL552_15760	PF14824	Sirohaem biosynthesis protein central
AL552_15765	PF04461	Protein of unknown function (DUF520)
AL552_15770	PF00793	DAHP synthetase I family
AL552_15775	PF14539	Domain of unknown function (DUF4442)
AL552_15785	PF13509	S1 domain
AL552_15790	PF01189	NOL1/NOP2/sun family
AL552_15790	PF13636	pre-rRNA processing and ribosome biogenesis
AL552_15790	PF17125	AL552_15790
AL552_15795	PF02470	AL552_15795
AL552_15800	PF04403	AL552_15800
AL552_15805	PF00005	ABC transporter
AL552_15805	PF00664	ABC transporter transmembrane region
AL552_15810	PF13185	GAF domain
AL552_15815	PF04352	ProQ/FINO family
AL552_15815	PF17516	AL552_15815
AL552_15820	PF00595	PDZ domain (Also known as DHR or GLGF)
AL552_15820	PF03572	Peptidase family S41
AL552_15820	PF08180	AL552_15820
AL552_15820	PF11818	AL552_15820
AL552_15830	PF01433	Peptidase family M1
AL552_15830	PF11940	Domain of unknown function (DUF3458)
AL552_15830	PF17432	AL552_15830
AL552_15835	PF11197	AL552_15835
AL552_15845	PF01180	Dihydroorotate dehydrogenase
AL552_15855	PF01170	Putative RNA methylase family UPF0020
AL552_15855	PF02926	THUMP domain
AL552_15855	PF10672	S-adenosylmethionine-dependent methyltransferase
AL552_15860	PF05768	Glutaredoxin-like domain (DUF836)
AL552_15865	PF00005	ABC transporter
AL552_15865	PF12848	ABC transporter
AL552_15865	PF16326	AL552_15865
AL552_15870	PF11949	AL552_15870
AL552_15875	PF04957	Ribosome modulation factor
AL552_15880	PF07977	FabA-like domain
AL552_15885	PF05362	Lon protease (S16) C-terminal proteolytic domain
AL552_15885	PF13654	AAA domain
AL552_15890	PF06303	Organiser of macrodomain of Terminus of chromosome
AL552_15890	PF17414	AL552_15890
AL552_15895	PF12321	AL552_15895
AL552_15910	PF00072	Response regulator receiver domain
AL552_15910	PF00512	His Kinase A (phospho-acceptor) domain
AL552_15910	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_15915	PF08495	AL552_15915
AL552_15915	PF10442	AL552_15915
AL552_15925	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AL552_15930	PF02433	Cytochrome C oxidase, mono-heme subunit/FixO
AL552_15935	PF05545	AL552_15935
AL552_15940	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
AL552_15940	PF14715	N-terminal domain of cytochrome oxidase-cbb3, FixP
AL552_15945	PF05751	AL552_15945
AL552_15950	PF00122	E1-E2 ATPase
AL552_15950	PF00403	Heavy-metal-associated domain
AL552_15950	PF00702	haloacid dehalogenase-like hydrolase
AL552_15950	PF12156	AL552_15950
AL552_15955	PF03597	AL552_15955
AL552_15960	PF13386	AL552_15960
AL552_15965	PF00027	Cyclic nucleotide-binding domain
AL552_15965	PF13545	Crp-like helix-turn-helix domain
AL552_15970	PF00582	Universal stress protein family
AL552_15975	PF01171	PP-loop family
AL552_15980	PF11205	AL552_15980
AL552_15985	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AL552_15995	PF00005	ABC transporter
AL552_15995	PF08402	TOBE domain
AL552_16000	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_16005	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_16010	PF13416	Bacterial extracellular solute-binding protein
AL552_16015	PF13416	Bacterial extracellular solute-binding protein
AL552_16020	PF02146	Sir2 family
AL552_16025	PF00909	Ammonium Transporter Family
AL552_16030	PF12796	Ankyrin repeats (3 copies)
AL552_16040	PF15575	AL552_16040
AL552_16045	PF14567	SMI1-KNR4 cell-wall
AL552_16055	PF14412	AL552_16055
AL552_16060	PF15575	AL552_16060
AL552_16065	PF15575	AL552_16065
AL552_16080	PF15575	AL552_16080
AL552_16090	PF15575	AL552_16090
AL552_16095	PF15575	AL552_16095
AL552_16110	PF15575	AL552_16110
AL552_16120	PF15575	AL552_16120
AL552_16140	PF15575	AL552_16140
AL552_16160	PF15575	AL552_16160
AL552_16180	PF01292	Prokaryotic cytochrome b561
AL552_16185	PF13247	4Fe-4S dicluster domain
AL552_16190	PF00384	Molybdopterin oxidoreductase
AL552_16190	PF01568	Molydopterin dinucleotide binding domain
AL552_16190	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL552_16200	PF02613	Nitrate reductase delta subunit
AL552_16205	PF00037	4Fe-4S binding domain
AL552_16205	PF12838	4Fe-4S dicluster domain
AL552_16210	PF11748	AL552_16210
AL552_16215	PF11749	AL552_16215
AL552_16220	PF02634	FdhD/NarQ family
AL552_16225	PF00005	ABC transporter
AL552_16225	PF12848	ABC transporter
AL552_16235	PF00512	His Kinase A (phospho-acceptor) domain
AL552_16235	PF00672	HAMP domain
AL552_16235	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_16235	PF17202	AL552_16235
AL552_16240	PF00072	Response regulator receiver domain
AL552_16240	PF00158	Sigma-54 interaction domain
AL552_16240	PF02954	Bacterial regulatory protein, Fis family
AL552_16245	PF12849	PBP superfamily domain
AL552_16250	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_16255	PF00005	ABC transporter
AL552_16260	PF12804	MobA-like NTP transferase domain
AL552_16265	PF00994	Probable molybdopterin binding domain
AL552_16265	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
AL552_16265	PF03453	MoeA N-terminal region (domain I and II)
AL552_16265	PF03454	MoeA C-terminal region (domain IV)
AL552_16270	PF11173	AL552_16270
AL552_16275	PF00480	ROK family
AL552_16280	PF03942	AL552_16280
AL552_16285	PF04116	AL552_16285
AL552_16300	PF00293	NUDIX domain
AL552_16310	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL552_16315	PF00877	NlpC/P60 family
AL552_16320	PF12290	AL552_16320
AL552_16325	PF00990	GGDEF domain
AL552_16330	PF00072	Response regulator receiver domain
AL552_16335	PF03881	Fructosamine kinase
AL552_16340	PF14255	AL552_16340
AL552_16345	PF00677	Lumazine binding domain
AL552_16350	PF01554	MatE
AL552_16355	PF11279	AL552_16355
AL552_16360	PF01068	ATP dependent DNA ligase domain
AL552_16360	PF14743	DNA ligase OB-like domain
AL552_16365	PF13466	STAS domain
AL552_16370	PF00691	OmpA family
AL552_16375	PF02563	Polysaccharide biosynthesis/export protein
AL552_16375	PF10531	SLBB domain
AL552_16385	PF01627	Hpt domain
AL552_16395	PF00534	Glycosyl transferases group 1
AL552_16395	PF13439	Glycosyltransferase Family 4
AL552_16400	PF00534	Glycosyl transferases group 1
AL552_16400	PF13439	Glycosyltransferase Family 4
AL552_16405	PF00534	Glycosyl transferases group 1
AL552_16410	PF01943	AL552_16410
AL552_16415	PF04932	AL552_16415
AL552_16420	PF13692	Glycosyl transferases group 1
AL552_16430	PF00534	Glycosyl transferases group 1
AL552_16430	PF13439	Glycosyltransferase Family 4
AL552_16435	PF13641	Glycosyltransferase like family 2
AL552_16440	PF02397	AL552_16440
AL552_16445	PF13671	AAA domain
AL552_16450	PF02028	BCCT family transporter
AL552_16455	PF13505	Outer membrane protein beta-barrel domain
AL552_16460	PF13505	Outer membrane protein beta-barrel domain
AL552_16465	PF00270	DEAD/DEAH box helicase
AL552_16465	PF00271	Helicase conserved C-terminal domain
AL552_16465	PF04408	Helicase associated domain (HA2)
AL552_16465	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
AL552_16465	PF11898	AL552_16465
AL552_16470	PF02525	Flavodoxin-like fold
AL552_16480	PF06629	AL552_16480
AL552_16495	PF05099	Tellurite resistance protein TerB
AL552_16500	PF00929	Exonuclease
AL552_16505	PF00990	GGDEF domain
AL552_16505	PF03924	CHASE domain
AL552_16510	PF10816	AL552_16510
AL552_16515	PF00012	Hsp70 protein
AL552_16520	PF00012	Hsp70 protein
AL552_16520	PF12531	AL552_16520
AL552_16540	PF07963	Prokaryotic N-terminal methylation motif
AL552_16545	PF00005	ABC transporter
AL552_16545	PF00664	ABC transporter transmembrane region
AL552_16550	PF00005	ABC transporter
AL552_16550	PF00664	ABC transporter transmembrane region
AL552_16560	PF00593	TonB dependent receptor
AL552_16560	PF07715	TonB-dependent Receptor Plug Domain
AL552_16565	PF01032	FecCD transport family
AL552_16570	PF01497	Periplasmic binding protein
AL552_16575	PF00005	ABC transporter
AL552_16585	PF13487	HD domain
AL552_16590	PF03222	Tryptophan/tyrosine permease family
AL552_16595	PF00465	Iron-containing alcohol dehydrogenase
AL552_16600	PF01966	HD domain
AL552_16605	PF13640	2OG-Fe(II) oxygenase superfamily
AL552_16610	PF03741	AL552_16610
AL552_16615	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_16615	PF03466	LysR substrate binding domain
AL552_16620	PF04055	Radical SAM superfamily
AL552_16620	PF13353	4Fe-4S single cluster domain
AL552_16625	PF11230	AL552_16625
AL552_16630	PF01810	AL552_16630
AL552_16635	PF01966	HD domain
AL552_16635	PF11871	AL552_16635
AL552_16645	PF00072	Response regulator receiver domain
AL552_16650	PF00027	Cyclic nucleotide-binding domain
AL552_16650	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_16660	PF13673	Acetyltransferase (GNAT) domain
AL552_16670	PF12570	AL552_16670
AL552_16675	PF00990	GGDEF domain
AL552_16675	PF02743	Cache domain
AL552_16680	PF03928	Domain of unknown function (DUF336)
AL552_16685	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL552_16685	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
AL552_16690	PF00455	AL552_16690
AL552_16690	PF08220	DeoR-like helix-turn-helix domain
AL552_16695	PF12710	haloacid dehalogenase-like hydrolase
AL552_16705	PF04055	Radical SAM superfamily
AL552_16705	PF13186	Iron-sulfur cluster-binding domain
AL552_16710	PF03781	Sulfatase-modifying factor enzyme 1
AL552_16720	PF00884	Sulfatase
AL552_16720	PF14707	C-terminal region of aryl-sulfatase
AL552_16725	PF00529	HlyD family secretion protein
AL552_16725	PF16576	AL552_16725
AL552_16730	PF11168	AL552_16730
AL552_16735	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_16735	PF03466	LysR substrate binding domain
AL552_16740	PF07869	AL552_16740
AL552_16745	PF16576	AL552_16745
AL552_16750	PF04632	AL552_16750
AL552_16760	PF01810	AL552_16760
AL552_16770	PF07237	Protein of unknown function (DUF1428)
AL552_16800	PF11665	AL552_16800
AL552_16815	PF00665	Integrase core domain
AL552_16830	PF14113	Domain of unknown function (DUF4285)
AL552_16835	PF11665	AL552_16835
AL552_16840	PF10387	Protein of unknown function (DUF2442)
AL552_16845	PF13711	AL552_16845
AL552_16860	PF11665	AL552_16860
AL552_16885	PF11665	AL552_16885
AL552_16910	PF11665	AL552_16910
AL552_16915	PF05488	PAAR motif
AL552_16930	PF06042	Bacterial protein of unknown function (DUF925)
AL552_16940	PF11665	AL552_16940
AL552_16950	PF11665	AL552_16950
AL552_16965	PF13957	AL552_16965
AL552_16985	PF11665	AL552_16985
AL552_17000	PF11665	AL552_17000
AL552_17005	PF13302	Acetyltransferase (GNAT) domain
AL552_17010	PF00293	NUDIX domain
AL552_17015	PF11665	AL552_17015
AL552_17045	PF11665	AL552_17045
AL552_17055	PF11665	AL552_17055
AL552_17070	PF05168	HEPN domain
AL552_17075	PF11665	AL552_17075
AL552_17090	PF11665	AL552_17090
AL552_17095	PF08867	AL552_17095
AL552_17100	PF11665	AL552_17100
AL552_17145	PF16695	AL552_17145
AL552_17150	PF14113	Domain of unknown function (DUF4285)
AL552_17155	PF14300	Domain of unknown function (DUF4375)
AL552_17160	PF11665	AL552_17160
AL552_17170	PF13527	Acetyltransferase (GNAT) domain
AL552_17175	PF11665	AL552_17175
AL552_17180	PF13508	Acetyltransferase (GNAT) domain
AL552_17185	PF11665	AL552_17185
AL552_17200	PF00293	NUDIX domain
AL552_17210	PF10881	AL552_17210
AL552_17215	PF11665	AL552_17215
AL552_17220	PF13420	Acetyltransferase (GNAT) domain
AL552_17225	PF11665	AL552_17225
AL552_17230	PF11665	AL552_17230
AL552_17240	PF11665	AL552_17240
AL552_17250	PF11665	AL552_17250
AL552_17260	PF13673	Acetyltransferase (GNAT) domain
AL552_17275	PF11665	AL552_17275
AL552_17290	PF02566	OsmC-like protein
AL552_17295	PF11665	AL552_17295
AL552_17300	PF13527	Acetyltransferase (GNAT) domain
AL552_17310	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AL552_17315	PF05016	Plasmid stabilisation system protein
AL552_17330	PF11665	AL552_17330
AL552_17340	PF13302	Acetyltransferase (GNAT) domain
AL552_17345	PF11665	AL552_17345
AL552_17365	PF11665	AL552_17365
AL552_17370	PF13643	AL552_17370
AL552_17375	PF11665	AL552_17375
AL552_17400	PF11665	AL552_17400
AL552_17430	PF11665	AL552_17430
AL552_17450	PF11665	AL552_17450
AL552_17475	PF11665	AL552_17475
AL552_17490	PF00293	NUDIX domain
AL552_17495	PF07653	Variant SH3 domain
AL552_17500	PF03091	CutA1 divalent ion tolerance protein
AL552_17520	PF11665	AL552_17520
AL552_17530	PF11665	AL552_17530
AL552_17540	PF04221	RelB antitoxin
AL552_17545	PF05016	Plasmid stabilisation system protein
AL552_17550	PF11665	AL552_17550
AL552_17560	PF13508	Acetyltransferase (GNAT) domain
AL552_17565	PF11665	AL552_17565
AL552_17570	PF04463	AL552_17570
AL552_17575	PF11665	AL552_17575
AL552_17580	PF13676	TIR domain
AL552_17590	PF11665	AL552_17590
AL552_17595	PF04973	AL552_17595
AL552_17600	PF11665	AL552_17600
AL552_17620	PF11665	AL552_17620
AL552_17630	PF13673	Acetyltransferase (GNAT) domain
AL552_17635	PF11665	AL552_17635
AL552_17655	PF11665	AL552_17655
AL552_17675	PF11665	AL552_17675
AL552_17680	PF00583	Acetyltransferase (GNAT) family
AL552_17685	PF11665	AL552_17685
AL552_17690	PF08867	AL552_17690
AL552_17700	PF11665	AL552_17700
AL552_17725	PF11665	AL552_17725
AL552_17730	PF00583	Acetyltransferase (GNAT) family
AL552_17735	PF11665	AL552_17735
AL552_17750	PF01965	DJ-1/PfpI family
AL552_17765	PF11665	AL552_17765
AL552_17770	PF11665	AL552_17770
AL552_17780	PF11665	AL552_17780
AL552_17790	PF11665	AL552_17790
AL552_17800	PF11665	AL552_17800
AL552_17820	PF11665	AL552_17820
AL552_17830	PF11665	AL552_17830
AL552_17840	PF11665	AL552_17840
AL552_17860	PF11665	AL552_17860
AL552_17885	PF01965	DJ-1/PfpI family
AL552_17895	PF11665	AL552_17895
AL552_17905	PF11665	AL552_17905
AL552_17920	PF11665	AL552_17920
AL552_17930	PF11665	AL552_17930
AL552_17940	PF00583	Acetyltransferase (GNAT) family
AL552_17945	PF11665	AL552_17945
AL552_17965	PF11665	AL552_17965
AL552_17975	PF11665	AL552_17975
AL552_17985	PF11665	AL552_17985
AL552_18000	PF14082	AL552_18000
AL552_18005	PF11665	AL552_18005
AL552_18015	PF11665	AL552_18015
AL552_18020	PF11665	AL552_18020
AL552_18035	PF00589	Phage integrase family
AL552_18035	PF13495	Phage integrase, N-terminal SAM-like domain
AL552_18040	PF11163	AL552_18040
AL552_18045	PF13023	HD domain
AL552_18050	PF13302	Acetyltransferase (GNAT) domain
AL552_18055	PF00158	Sigma-54 interaction domain
AL552_18055	PF00989	PAS fold
AL552_18060	PF05128	AL552_18060
AL552_18065	PF04317	AL552_18065
AL552_18075	PF05681	AL552_18075
AL552_18075	PF05683	Fumarase C-terminus
AL552_18085	PF00425	chorismate binding enzyme
AL552_18085	PF04715	Anthranilate synthase component I, N terminal region
AL552_18090	PF00072	Response regulator receiver domain
AL552_18090	PF00512	His Kinase A (phospho-acceptor) domain
AL552_18090	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_18095	PF07700	Heme NO binding
AL552_18100	PF00293	NUDIX domain
AL552_18105	PF03222	Tryptophan/tyrosine permease family
AL552_18110	PF03313	AL552_18110
AL552_18110	PF03315	Serine dehydratase beta chain
AL552_18115	PF00563	EAL domain
AL552_18120	PF00583	Acetyltransferase (GNAT) family
AL552_18125	PF01242	6-pyruvoyl tetrahydropterin synthase
AL552_18130	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL552_18135	PF00152	tRNA synthetases class II (D, K and N)
AL552_18135	PF01336	OB-fold nucleic acid binding domain
AL552_18145	PF00155	Aminotransferase class I and II
AL552_18145	PF00392	Bacterial regulatory proteins, gntR family
AL552_18160	PF00155	Aminotransferase class I and II
AL552_18165	PF13505	Outer membrane protein beta-barrel domain
AL552_18170	PF00027	Cyclic nucleotide-binding domain
AL552_18170	PF00571	CBS domain
AL552_18170	PF03445	AL552_18170
AL552_18170	PF10335	AL552_18170
AL552_18175	PF00929	Exonuclease
AL552_18180	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL552_18180	PF00672	HAMP domain
AL552_18180	PF02743	Cache domain
AL552_18185	PF02028	BCCT family transporter
AL552_18190	PF01047	MarR family
AL552_18195	PF00072	Response regulator receiver domain
AL552_18195	PF00196	Bacterial regulatory proteins, luxR family
AL552_18200	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_18200	PF07730	Histidine kinase
AL552_18200	PF17200	AL552_18200
AL552_18205	PF06808	AL552_18205
AL552_18210	PF04290	AL552_18210
AL552_18215	PF03480	Bacterial extracellular solute-binding protein, family 7
AL552_18225	PF11201	AL552_18225
AL552_18230	PF00753	Metallo-beta-lactamase superfamily
AL552_18235	PF05951	AL552_18235
AL552_18240	PF01471	Putative peptidoglycan binding domain
AL552_18240	PF03734	L,D-transpeptidase catalytic domain
AL552_18245	PF07433	AL552_18245
AL552_18250	PF09375	Imelysin
AL552_18255	PF06537	AL552_18255
AL552_18260	PF09375	Imelysin
AL552_18265	PF00925	GTP cyclohydrolase II
AL552_18275	PF03918	Cytochrome C biogenesis protein
AL552_18280	PF08534	Redoxin
AL552_18285	PF01578	AL552_18285
AL552_18285	PF16327	AL552_18285
AL552_18290	PF03916	AL552_18290
AL552_18295	PF12800	4Fe-4S binding domain
AL552_18295	PF13247	4Fe-4S dicluster domain
AL552_18300	PF09699	Doubled CXXCH motif (Paired_CXXCH_1)
AL552_18305	PF02335	Cytochrome c552
AL552_18320	PF00521	DNA gyrase/topoisomerase IV, subunit A
AL552_18320	PF03989	DNA gyrase C-terminal domain, beta-propeller
AL552_18325	PF13489	Methyltransferase domain
AL552_18330	PF00317	Ribonucleotide reductase, all-alpha domain
AL552_18330	PF02867	Ribonucleotide reductase, barrel domain
AL552_18330	PF03477	ATP cone domain
AL552_18335	PF00268	Ribonucleotide reductase, small chain
AL552_18340	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL552_18345	PF00994	Probable molybdopterin binding domain
AL552_18350	PF13084	AL552_18350
AL552_18355	PF13740	ACT domain
AL552_18360	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
AL552_18365	PF03435	Saccharopine dehydrogenase
AL552_18365	PF16653	AL552_18365
AL552_18370	PF00202	Aminotransferase class-III
AL552_18370	PF00282	Pyridoxal-dependent decarboxylase conserved domain
AL552_18395	PF01066	CDP-alcohol phosphatidyltransferase
AL552_18400	PF01541	GIY-YIG catalytic domain
AL552_18400	PF02151	UvrB/uvrC motif
AL552_18400	PF08459	UvrC Helix-hairpin-helix N-terminal
AL552_18400	PF14520	Helix-hairpin-helix domain
AL552_18405	PF00072	Response regulator receiver domain
AL552_18405	PF00196	Bacterial regulatory proteins, luxR family
AL552_18410	PF00136	DNA polymerase family B
AL552_18410	PF03104	DNA polymerase family B, exonuclease domain
AL552_18420	PF01132	Elongation factor P (EF-P) OB domain
AL552_18420	PF08207	Elongation factor P (EF-P) KOW-like domain
AL552_18420	PF09285	Elongation factor P, C-terminal
AL552_18425	PF04269	Protein of unknown function, DUF440
AL552_18430	PF00849	RNA pseudouridylate synthase
AL552_18430	PF01479	S4 domain
AL552_18435	PF00353	Hemolysin-type calcium-binding repeat (2 copies)
AL552_18440	PF01300	Telomere recombination
AL552_18445	PF02811	PHP domain
AL552_18450	PF08056	AL552_18450
AL552_18455	PF00425	chorismate binding enzyme
AL552_18455	PF04715	Anthranilate synthase component I, N terminal region
AL552_18460	PF00117	Glutamine amidotransferase class-I
AL552_18465	PF00591	Glycosyl transferase family, a/b domain
AL552_18465	PF02885	Glycosyl transferase family, helical bundle domain
AL552_18470	PF00218	Indole-3-glycerol phosphate synthase
AL552_18470	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
AL552_18475	PF00291	Pyridoxal-phosphate dependent enzyme
AL552_18480	PF00290	Tryptophan synthase alpha chain
AL552_18485	PF00027	Cyclic nucleotide-binding domain
AL552_18485	PF13545	Crp-like helix-turn-helix domain
AL552_18490	PF00501	AMP-binding enzyme
AL552_18490	PF13193	AMP-binding enzyme C-terminal domain
AL552_18500	PF00375	Sodium:dicarboxylate symporter family
AL552_18505	PF17327	AL552_18505
AL552_18510	PF00072	Response regulator receiver domain
AL552_18510	PF00512	His Kinase A (phospho-acceptor) domain
AL552_18510	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_18520	PF04279	AL552_18520
AL552_18525	PF03061	Thioesterase superfamily
AL552_18530	PF03795	YCII-related domain
AL552_18535	PF16549	AL552_18535
AL552_18540	PF01717	Cobalamin-independent synthase, Catalytic domain
AL552_18540	PF08267	Cobalamin-independent synthase, N-terminal domain
AL552_18550	PF14056	AL552_18550
AL552_18560	PF00563	EAL domain
AL552_18560	PF00571	CBS domain
AL552_18560	PF00989	PAS fold
AL552_18565	PF04055	Radical SAM superfamily
AL552_18565	PF08497	AL552_18565
AL552_18565	PF11842	AL552_18565
AL552_18570	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL552_18580	PF00072	Response regulator receiver domain
AL552_18580	PF00486	Transcriptional regulatory protein, C terminal
AL552_18585	PF00512	His Kinase A (phospho-acceptor) domain
AL552_18585	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_18595	PF00857	Isochorismatase family
AL552_18600	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_18600	PF03466	LysR substrate binding domain
AL552_18605	PF13437	HlyD family secretion protein
AL552_18605	PF13533	Biotin-lipoyl like
AL552_18610	PF11168	AL552_18610
AL552_18610	PF13515	AL552_18610
AL552_18615	PF01717	Cobalamin-independent synthase, Catalytic domain
AL552_18620	PF08908	AL552_18620
AL552_18625	PF07968	Leukocidin/Hemolysin toxin family
AL552_18635	PF00005	ABC transporter
AL552_18640	PF02687	AL552_18640
AL552_18640	PF12704	MacB-like periplasmic core domain
AL552_18645	PF02687	AL552_18645
AL552_18645	PF12704	MacB-like periplasmic core domain
AL552_18650	PF02321	Outer membrane efflux protein
AL552_18655	PF16576	AL552_18655
AL552_18660	PF13302	Acetyltransferase (GNAT) domain
AL552_18665	PF00583	Acetyltransferase (GNAT) family
AL552_18670	PF13649	Methyltransferase domain
AL552_18685	PF00085	Thioredoxin
AL552_18690	PF02683	AL552_18690
AL552_18690	PF11412	Disulphide bond corrector protein DsbC
AL552_18690	PF13899	Thioredoxin-like
AL552_18700	PF00072	Response regulator receiver domain
AL552_18700	PF00196	Bacterial regulatory proteins, luxR family
AL552_18705	PF00512	His Kinase A (phospho-acceptor) domain
AL552_18705	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_18705	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
AL552_18710	PF13247	4Fe-4S dicluster domain
AL552_18715	PF03916	AL552_18715
AL552_18720	PF00384	Molybdopterin oxidoreductase
AL552_18720	PF01568	Molydopterin dinucleotide binding domain
AL552_18725	PF00034	Cytochrome c
AL552_18730	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
AL552_18735	PF04403	AL552_18735
AL552_18740	PF02470	AL552_18740
AL552_18745	PF03886	Protein of unknown function (DUF330)
AL552_18755	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL552_18760	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
AL552_18765	PF13176	Tetratricopeptide repeat
AL552_18765	PF14559	Tetratricopeptide repeat
AL552_18770	PF06305	AL552_18770
AL552_18775	PF00216	Bacterial DNA-binding protein
AL552_18780	PF00575	S1 RNA binding domain
AL552_18785	PF02224	Cytidylate kinase
AL552_18790	PF01343	Peptidase family S49
AL552_18790	PF08496	AL552_18790
AL552_18795	PF00106	short chain dehydrogenase
AL552_18800	PF00154	recA bacterial DNA recombination protein
AL552_18810	PF01336	OB-fold nucleic acid binding domain
AL552_18810	PF02811	PHP domain
AL552_18810	PF07733	Bacterial DNA polymerase III alpha subunit
AL552_18810	PF14579	Helix-hairpin-helix motif
AL552_18815	PF00072	Response regulator receiver domain
AL552_18815	PF01584	CheW-like domain
AL552_18820	PF00480	ROK family
AL552_18825	PF00224	Pyruvate kinase, barrel domain
AL552_18825	PF02887	Pyruvate kinase, alpha/beta domain
AL552_18830	PF01734	Patatin-like phospholipase
AL552_18845	PF00209	Sodium:neurotransmitter symporter family
AL552_18855	PF00367	phosphotransferase system, EIIB
AL552_18855	PF02378	Phosphotransferase system, EIIC
AL552_18860	PF01026	TatD related DNase
AL552_18865	PF09115	DNA polymerase III, delta subunit, C terminal
AL552_18865	PF13177	DNA polymerase III, delta subunit
AL552_18870	PF02223	Thymidylate kinase
AL552_18875	PF02618	YceG-like family
AL552_18880	PF01063	Aminotransferase class IV
AL552_18885	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL552_18885	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL552_18890	PF00550	Phosphopantetheine attachment site
AL552_18895	PF13561	Enoyl-(Acyl carrier protein) reductase
AL552_18900	PF00698	Acyl transferase domain
AL552_18905	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
AL552_18905	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AL552_18910	PF02504	Fatty acid synthesis protein
AL552_18915	PF01783	Ribosomal L32p protein family
AL552_18920	PF02620	AL552_18920
AL552_18925	PF02545	Maf-like protein
AL552_18930	PF00849	RNA pseudouridylate synthase
AL552_18930	PF01479	S4 domain
AL552_18935	PF00575	S1 RNA binding domain
AL552_18935	PF10150	Ribonuclease E/G family
AL552_18945	PF00916	AL552_18945
AL552_18945	PF01740	STAS domain
AL552_18950	PF01451	Low molecular weight phosphotyrosine protein phosphatase
AL552_18955	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
AL552_18955	PF12557	Cob(I)alamin adenosyltransferase N terminal
AL552_18965	PF00485	Phosphoribulokinase / Uridine kinase family
AL552_18970	PF10609	ParA/MinD ATPase like
AL552_18975	PF01588	Putative tRNA binding domain
AL552_18975	PF09334	tRNA synthetases class I (M)
AL552_19000	PF00392	Bacterial regulatory proteins, gntR family
AL552_19000	PF07840	FadR C-terminal domain
AL552_19005	PF06450	AL552_19005
AL552_19010	PF02600	Disulfide bond formation protein DsbB
AL552_19015	PF02810	SEC-C motif
AL552_19015	PF03695	Uncharacterised protein family (UPF0149)
AL552_19020	PF01207	Dihydrouridine synthase (Dus)
AL552_19025	PF00990	GGDEF domain
AL552_19030	PF00128	Alpha amylase, catalytic domain
AL552_19030	PF02903	Alpha amylase, N-terminal ig-like domain
AL552_19030	PF16657	AL552_19030
AL552_19035	PF00005	ABC transporter
AL552_19040	PF02653	AL552_19040
AL552_19045	PF04392	ABC transporter substrate binding protein
AL552_19050	PF04217	AL552_19050
AL552_19055	PF00871	Acetokinase family
AL552_19065	PF02308	AL552_19065
AL552_19065	PF13194	AL552_19065
AL552_19075	PF13409	Glutathione S-transferase, N-terminal domain
AL552_19075	PF13410	Glutathione S-transferase, C-terminal domain
AL552_19080	PF00005	ABC transporter
AL552_19080	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL552_19085	PF00005	ABC transporter
AL552_19085	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL552_19090	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_19090	PF12911	AL552_19090
AL552_19095	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_19100	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL552_19105	PF02391	MoaE protein
AL552_19110	PF02597	ThiS family
AL552_19115	PF01967	MoaC family
AL552_19120	PF00994	Probable molybdopterin binding domain
AL552_19125	PF04055	Radical SAM superfamily
AL552_19125	PF06463	Molybdenum Cofactor Synthesis C
AL552_19125	PF13353	4Fe-4S single cluster domain
AL552_19130	PF01933	Uncharacterised protein family UPF0052
AL552_19135	PF01627	Hpt domain
AL552_19140	PF00072	Response regulator receiver domain
AL552_19140	PF00158	Sigma-54 interaction domain
AL552_19140	PF02954	Bacterial regulatory protein, Fis family
AL552_19145	PF00271	Helicase conserved C-terminal domain
AL552_19145	PF02151	UvrB/uvrC motif
AL552_19145	PF04851	Type III restriction enzyme, res subunit
AL552_19145	PF12344	Ultra-violet resistance protein B
AL552_19155	PF02508	AL552_19155
AL552_19160	PF04060	Putative Fe-S cluster
AL552_19160	PF14697	4Fe-4S dicluster domain
AL552_19165	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
AL552_19165	PF10531	SLBB domain
AL552_19165	PF12838	4Fe-4S dicluster domain
AL552_19165	PF13375	RnfC Barrel sandwich hybrid domain
AL552_19170	PF03116	AL552_19170
AL552_19175	PF04205	FMN-binding domain
AL552_19180	PF02508	AL552_19180
AL552_19185	PF00633	Helix-hairpin-helix motif
AL552_19185	PF00730	HhH-GPD superfamily base excision DNA repair protein
AL552_19185	PF10576	Iron-sulfur binding domain of endonuclease III
AL552_19190	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL552_19195	PF10952	AL552_19195
AL552_19200	PF00691	OmpA family
AL552_19210	PF00929	Exonuclease
AL552_19215	PF03553	AL552_19215
AL552_19215	PF13726	AL552_19215
AL552_19220	PF13743	Thioredoxin
AL552_19225	PF00462	Glutaredoxin
AL552_19230	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
AL552_19230	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AL552_19235	PF11993	AL552_19235
AL552_19240	PF00106	short chain dehydrogenase
AL552_19245	PF00171	Aldehyde dehydrogenase family
AL552_19245	PF00465	Iron-containing alcohol dehydrogenase
AL552_19250	PF01914	AL552_19250
AL552_19255	PF00520	Ion transport protein
AL552_19260	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AL552_19260	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AL552_19265	PF03553	AL552_19265
AL552_19275	PF01627	Hpt domain
AL552_19280	PF04245	AL552_19280
AL552_19285	PF07208	Protein of unknown function (DUF1414)
AL552_19290	PF00884	Sulfatase
AL552_19290	PF11893	AL552_19290
AL552_19300	PF00850	Histone deacetylase domain
AL552_19305	PF00106	short chain dehydrogenase
AL552_19315	PF01131	DNA topoisomerase
AL552_19315	PF01751	Toprim domain
AL552_19320	PF00881	Nitroreductase family
AL552_19325	PF07690	Major Facilitator Superfamily
AL552_19330	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AL552_19330	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL552_19335	PF01343	Peptidase family S49
AL552_19340	PF00710	Asparaginase
AL552_19345	PF07023	AL552_19345
AL552_19350	PF11207	AL552_19350
AL552_19355	PF01641	SelR domain
AL552_19360	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL552_19360	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AL552_19365	PF01263	Aldose 1-epimerase
AL552_19370	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL552_19370	PF17201	AL552_19370
AL552_19375	PF13847	Methyltransferase domain
AL552_19380	PF04187	Protein of unknown function, DUF399
AL552_19395	PF00245	Alkaline phosphatase
AL552_19400	PF13467	Ribbon-helix-helix domain
AL552_19405	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL552_19410	PF03992	Antibiotic biosynthesis monooxygenase
AL552_19415	PF00924	Mechanosensitive ion channel
AL552_19420	PF03692	AL552_19420
AL552_19425	PF04226	AL552_19425
AL552_19430	PF03692	AL552_19430
AL552_19435	PF08348	AL552_19435
AL552_19435	PF13309	AL552_19435
AL552_19440	PF03313	AL552_19440
AL552_19445	PF01042	Endoribonuclease L-PSP
AL552_19455	PF00230	Major intrinsic protein
AL552_19460	PF02132	RecR protein
AL552_19460	PF13662	Toprim domain
AL552_19465	PF02575	YbaB/EbfC DNA-binding family
AL552_19470	PF12168	AL552_19470
AL552_19470	PF12169	DNA polymerase III subunits gamma and tau domain III
AL552_19470	PF12170	DNA polymerase III tau subunit V interacting with alpha
AL552_19470	PF13177	DNA polymerase III, delta subunit
AL552_19475	PF00156	Phosphoribosyl transferase domain
AL552_19490	PF00072	Response regulator receiver domain
AL552_19495	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_19495	PF03466	LysR substrate binding domain
AL552_19500	PF00156	Phosphoribosyl transferase domain
AL552_19500	PF13522	Glutamine amidotransferase domain
AL552_19505	PF02674	AL552_19505
AL552_19510	PF05036	Sporulation related domain
AL552_19515	PF08245	Mur ligase middle domain
AL552_19520	PF01039	Carboxyl transferase domain
AL552_19530	PF01416	tRNA pseudouridine synthase
AL552_19540	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AL552_19540	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AL552_19545	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL552_19545	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL552_19545	PF11890	Domain of unknown function (DUF3410)
AL552_19550	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL552_19550	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL552_19555	PF01266	FAD dependent oxidoreductase
AL552_19555	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
AL552_19560	PF03358	NADPH-dependent FMN reductase
AL552_19570	PF08891	AL552_19570
AL552_19575	PF04315	AL552_19575
AL552_19585	PF03458	AL552_19585
AL552_19590	PF01264	Chorismate synthase
AL552_19595	PF05175	Methyltransferase small domain
AL552_19600	PF01713	Smr domain
AL552_19605	PF00300	Histidine phosphatase superfamily (branch 1)
AL552_19610	PF00675	Insulinase (Peptidase family M16)
AL552_19610	PF05193	Peptidase M16 inactive domain
AL552_19610	PF16187	AL552_19610
AL552_19620	PF00378	Enoyl-CoA hydratase/isomerase family
AL552_19620	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AL552_19620	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AL552_19625	PF00108	Thiolase, N-terminal domain
AL552_19625	PF02803	Thiolase, C-terminal domain
AL552_19630	PF04542	Sigma-70 region 2
AL552_19630	PF08281	Sigma-70, region 4
AL552_19635	PF11859	AL552_19635
AL552_19640	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
AL552_19645	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
AL552_19655	PF14559	Tetratricopeptide repeat
AL552_19660	PF03918	Cytochrome C biogenesis protein
AL552_19665	PF08534	Redoxin
AL552_19670	PF01578	AL552_19670
AL552_19670	PF16327	AL552_19670
AL552_19675	PF03100	CcmE
AL552_19680	PF04995	AL552_19680
AL552_19685	PF01578	AL552_19685
AL552_19690	PF03379	AL552_19690
AL552_19695	PF00005	ABC transporter
AL552_19700	PF10975	AL552_19700
AL552_19705	PF01584	CheW-like domain
AL552_19710	PF01584	CheW-like domain
AL552_19715	PF13614	AAA domain
AL552_19720	PF00072	Response regulator receiver domain
AL552_19720	PF01339	CheB methylesterase
AL552_19725	PF01584	CheW-like domain
AL552_19725	PF01627	Hpt domain
AL552_19725	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_19725	PF02895	Signal transducing histidine kinase, homodimeric domain
AL552_19730	PF04344	Chemotaxis phosphatase, CheZ
AL552_19735	PF00072	Response regulator receiver domain
AL552_19740	PF04539	Sigma-70 region 3
AL552_19740	PF04542	Sigma-70 region 2
AL552_19740	PF04545	Sigma-70, region 4
AL552_19745	PF10609	ParA/MinD ATPase like
AL552_19750	PF00448	SRP54-type protein, GTPase domain
AL552_19755	PF00771	FHIPEP family
AL552_19760	PF01312	FlhB HrpN YscU SpaS Family
AL552_19765	PF01311	AL552_19765
AL552_19770	PF01313	AL552_19770
AL552_19775	PF00813	AL552_19775
AL552_19780	PF04347	AL552_19780
AL552_19785	PF01052	Surface presentation of antigens (SPOA)
AL552_19790	PF01052	Surface presentation of antigens (SPOA)
AL552_19790	PF02154	Flagellar motor switch protein FliM
AL552_19795	PF03748	AL552_19795
AL552_19800	PF02120	Flagellar hook-length control protein FliK
AL552_19805	PF02050	Flagellar FliJ protein
AL552_19810	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL552_19815	PF02108	AL552_19815
AL552_19820	PF01706	FliG C-terminal domain
AL552_19820	PF14841	FliG middle domain
AL552_19820	PF14842	FliG N-terminal domain
AL552_19825	PF01514	Secretory protein of YscJ/FliF family
AL552_19825	PF08345	AL552_19825
AL552_19830	PF02049	AL552_19830
AL552_19835	PF00072	Response regulator receiver domain
AL552_19835	PF00158	Sigma-54 interaction domain
AL552_19835	PF02954	Bacterial regulatory protein, Fis family
AL552_19840	PF00512	His Kinase A (phospho-acceptor) domain
AL552_19840	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_19840	PF13188	PAS domain
AL552_19845	PF00158	Sigma-54 interaction domain
AL552_19845	PF02954	Bacterial regulatory protein, Fis family
AL552_19845	PF06490	AL552_19845
AL552_19850	PF02561	Flagellar protein FliS
AL552_19860	PF02465	AL552_19860
AL552_19860	PF07195	AL552_19860
AL552_19860	PF07196	Flagellin hook IN motif
AL552_19865	PF03646	FlaG protein
AL552_19870	PF00669	Bacterial flagellin N-terminal helical region
AL552_19870	PF00700	Bacterial flagellin C-terminal helical region
AL552_19870	PF07196	Flagellin hook IN motif
AL552_19875	PF00669	Bacterial flagellin N-terminal helical region
AL552_19875	PF00700	Bacterial flagellin C-terminal helical region
AL552_19875	PF07196	Flagellin hook IN motif
AL552_19885	PF00669	Bacterial flagellin N-terminal helical region
AL552_19885	PF00700	Bacterial flagellin C-terminal helical region
AL552_19885	PF07196	Flagellin hook IN motif
AL552_19890	PF04261	Dyp-type peroxidase family
AL552_19895	PF11143	AL552_19895
AL552_19900	PF11169	AL552_19900
AL552_19905	PF13698	AL552_19905
AL552_19910	PF09904	Winged helix-turn helix
AL552_19915	PF03960	ArsC family
AL552_19920	PF01546	Peptidase family M20/M25/M40
AL552_19920	PF07687	Peptidase dimerisation domain
AL552_19925	PF02557	D-alanyl-D-alanine carboxypeptidase
AL552_19930	PF11446	AL552_19930
AL552_19935	PF06804	NlpB/DapX lipoprotein
AL552_19940	PF00701	Dihydrodipicolinate synthetase family
AL552_19945	PF13740	ACT domain
AL552_19950	PF00578	AhpC/TSA family
AL552_19955	PF01594	AL552_19955
AL552_19965	PF01435	Peptidase family M48
AL552_19965	PF14559	Tetratricopeptide repeat
AL552_19970	PF03960	ArsC family
AL552_19975	PF03358	NADPH-dependent FMN reductase
AL552_19980	PF09842	AL552_19980
AL552_19985	PF09839	AL552_19985
AL552_19990	PF00860	Permease family
AL552_19995	PF14681	Uracil phosphoribosyltransferase
AL552_20000	PF00586	AIR synthase related protein, N-terminal domain
AL552_20000	PF02769	AIR synthase related protein, C-terminal domain
AL552_20005	PF00551	Formyl transferase
AL552_20010	PF13230	Glutamine amidotransferases class-II
AL552_20015	PF13580	SIS domain
AL552_20020	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL552_20020	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL552_20020	PF09317	AL552_20020
AL552_20025	PF00916	AL552_20025
AL552_20025	PF01740	STAS domain
AL552_20030	PF13508	Acetyltransferase (GNAT) domain
AL552_20035	PF07087	AL552_20035
AL552_20050	PF00929	Exonuclease
AL552_20055	PF00075	RNase H
AL552_20060	PF08241	Methyltransferase domain
AL552_20065	PF16123	AL552_20065
AL552_20070	PF01464	Transglycosylase SLT domain
AL552_20070	PF01476	LysM domain
AL552_20075	PF06930	AL552_20075
AL552_20080	PF03372	Endonuclease/Exonuclease/phosphatase family
AL552_20085	PF00543	Nitrogen regulatory protein P-II
AL552_20090	PF00034	Cytochrome c
AL552_20095	PF01171	PP-loop family
AL552_20095	PF09179	TilS substrate binding domain
AL552_20095	PF11734	TilS substrate C-terminal domain
AL552_20100	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
AL552_20105	PF01336	OB-fold nucleic acid binding domain
AL552_20105	PF02811	PHP domain
AL552_20105	PF07733	Bacterial DNA polymerase III alpha subunit
AL552_20105	PF14579	Helix-hairpin-helix motif
AL552_20110	PF01351	Ribonuclease HII
AL552_20115	PF02684	AL552_20115
AL552_20120	PF00132	Bacterial transferase hexapeptide (six repeats)
AL552_20120	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
AL552_20125	PF07977	FabA-like domain
AL552_20130	PF00132	Bacterial transferase hexapeptide (six repeats)
AL552_20130	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD
AL552_20130	PF14602	Hexapeptide repeat of succinyl-transferase
AL552_20135	PF03938	Outer membrane protein (OmpH-like)
AL552_20145	PF02163	Peptidase family M50
AL552_20145	PF13180	PDZ domain
AL552_20150	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
AL552_20150	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
AL552_20150	PF13288	DXP reductoisomerase C-terminal domain
AL552_20155	PF01148	Cytidylyltransferase family
AL552_20160	PF01255	Putative undecaprenyl diphosphate synthase
AL552_20165	PF01765	Ribosome recycling factor
AL552_20170	PF00696	Amino acid kinase family
AL552_20175	PF00889	Elongation factor TS
AL552_20180	PF00318	Ribosomal protein S2
AL552_20185	PF00557	Metallopeptidase family M24
AL552_20195	PF11944	AL552_20195
AL552_20200	PF00849	RNA pseudouridylate synthase
AL552_20205	PF04287	tRNA pseudouridine synthase C
AL552_20210	PF12069	AL552_20210
AL552_20215	PF11743	AL552_20215
AL552_20220	PF13302	Acetyltransferase (GNAT) domain
AL552_20230	PF02639	AL552_20230
AL552_20235	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
AL552_20235	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AL552_20240	PF01370	NAD dependent epimerase/dehydratase family
AL552_20245	PF00753	Metallo-beta-lactamase superfamily
AL552_20255	PF02655	ATP-grasp domain
AL552_20265	PF03806	AL552_20265
AL552_20270	PF00444	Ribosomal protein L36
AL552_20275	PF01197	Ribosomal protein L31
AL552_20280	PF01980	Uncharacterised protein family UPF0066
AL552_20285	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AL552_20285	PF03129	Anticodon binding domain
AL552_20285	PF04073	Aminoacyl-tRNA editing domain
AL552_20290	PF04391	AL552_20290
AL552_20295	PF06786	AL552_20295
AL552_20300	PF14056	AL552_20300
AL552_20305	PF00209	Sodium:neurotransmitter symporter family
AL552_20310	PF00704	Glycosyl hydrolases family 18
AL552_20320	PF01272	Transcription elongation factor, GreA/GreB, C-term
AL552_20325	PF00270	DEAD/DEAH box helicase
AL552_20325	PF00271	Helicase conserved C-terminal domain
AL552_20325	PF16124	AL552_20325
AL552_20335	PF10982	Protein of unknown function (DUF2789)
AL552_20340	PF04400	AL552_20340
AL552_20345	PF02424	ApbE family
AL552_20350	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL552_20350	PF00175	Oxidoreductase NAD-binding domain
AL552_20350	PF00970	Oxidoreductase FAD-binding domain
AL552_20355	PF02508	AL552_20355
AL552_20360	PF02508	AL552_20360
AL552_20365	PF04205	FMN-binding domain
AL552_20370	PF03116	AL552_20370
AL552_20375	PF05896	AL552_20375
AL552_20375	PF11973	AL552_20375
AL552_20385	PF01722	BolA-like protein
AL552_20390	PF05175	Methyltransferase small domain
AL552_20395	PF03923	AL552_20395
AL552_20400	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
AL552_20405	PF07690	Major Facilitator Superfamily
AL552_20410	PF12973	ChrR Cupin-like domain
AL552_20415	PF04542	Sigma-70 region 2
AL552_20415	PF04545	Sigma-70, region 4
AL552_20420	PF14344	AL552_20420
AL552_20425	PF02190	ATP-dependent protease La (LON) domain
AL552_20435	PF03502	Nucleoside-specific channel-forming protein, Tsx
AL552_20440	PF02558	Ketopantoate reductase PanE/ApbA
AL552_20440	PF08546	Ketopantoate reductase PanE/ApbA C terminal
AL552_20445	PF01965	DJ-1/PfpI family
AL552_20450	PF00266	Aminotransferase class-V
AL552_20455	PF00990	GGDEF domain
AL552_20460	PF02657	Fe-S metabolism associated domain
AL552_20465	PF00899	ThiF family
AL552_20470	PF03562	MltA specific insert domain
AL552_20470	PF06725	3D domain
AL552_20480	PF11012	AL552_20480
AL552_20485	PF00583	Acetyltransferase (GNAT) family
AL552_20485	PF00696	Amino acid kinase family
AL552_20505	PF13538	UvrD-like helicase C-terminal domain
AL552_20505	PF13604	AAA domain
AL552_20510	PF00580	UvrD/REP helicase N-terminal domain
AL552_20510	PF12705	PD-(D/E)XK nuclease superfamily
AL552_20510	PF13361	UvrD-like helicase C-terminal domain
AL552_20520	PF04257	Exodeoxyribonuclease V, gamma subunit
AL552_20525	PF00884	Sulfatase
AL552_20525	PF11893	AL552_20525
AL552_20530	PF03595	Voltage-dependent anion channel
AL552_20535	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_20535	PF03466	LysR substrate binding domain
AL552_20540	PF07130	YebG protein
AL552_20545	PF14602	Hexapeptide repeat of succinyl-transferase
AL552_20545	PF14789	Tetrahydrodipicolinate N-succinyltransferase middle
AL552_20550	PF03009	Glycerophosphoryl diester phosphodiesterase family
AL552_20555	PF07690	Major Facilitator Superfamily
AL552_20565	PF00230	Major intrinsic protein
AL552_20570	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AL552_20570	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AL552_20575	PF00455	AL552_20575
AL552_20575	PF08220	DeoR-like helix-turn-helix domain
AL552_20580	PF01266	FAD dependent oxidoreductase
AL552_20580	PF16901	AL552_20580
AL552_20585	PF01544	CorA-like Mg2+ transporter protein
AL552_20590	PF05940	AL552_20590
AL552_20595	PF06094	AIG2-like family
AL552_20600	PF01588	Putative tRNA binding domain
AL552_20605	PF00356	Bacterial regulatory proteins, lacI family
AL552_20605	PF13377	Periplasmic binding protein-like domain
AL552_20610	PF00929	Exonuclease
AL552_20615	PF00571	CBS domain
AL552_20615	PF03445	AL552_20615
AL552_20615	PF10335	AL552_20615
AL552_20620	PF00474	Sodium:solute symporter family
AL552_20625	PF01263	Aldose 1-epimerase
AL552_20630	PF00288	GHMP kinases N terminal domain
AL552_20630	PF08544	GHMP kinases C terminal
AL552_20630	PF10509	Galactokinase galactose-binding signature
AL552_20635	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
AL552_20635	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
AL552_20640	PF16363	AL552_20640
AL552_20650	PF00356	Bacterial regulatory proteins, lacI family
AL552_20650	PF13377	Periplasmic binding protein-like domain
AL552_20655	PF00703	Glycosyl hydrolases family 2
AL552_20655	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
AL552_20655	PF02837	Glycosyl hydrolases family 2, sugar binding domain
AL552_20655	PF02929	Beta galactosidase small chain
AL552_20655	PF16353	AL552_20655
AL552_20660	PF04074	Domain of unknown function (DUF386)
AL552_20665	PF13520	Amino acid permease
AL552_20670	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_20670	PF03466	LysR substrate binding domain
AL552_20675	PF02417	AL552_20675
AL552_20680	PF14378	AL552_20680
AL552_20685	PF13181	Tetratricopeptide repeat
AL552_20685	PF13432	Tetratricopeptide repeat
AL552_20695	PF00482	Type II secretion system (T2SS), protein F
AL552_20700	PF00437	Type II/IV secretion system protein
AL552_20705	PF13614	AAA domain
AL552_20710	PF07811	AL552_20710
AL552_20715	PF07811	AL552_20715
AL552_20720	PF13400	AL552_20720
AL552_20730	PF00263	AL552_20730
AL552_20730	PF04972	BON domain
AL552_20730	PF13629	AL552_20730
AL552_20735	PF08666	SAF domain
AL552_20735	PF16976	AL552_20735
AL552_20745	PF01478	Type IV leader peptidase family
AL552_20755	PF12833	Helix-turn-helix domain
AL552_20760	PF00501	AMP-binding enzyme
AL552_20765	PF06568	AL552_20765
AL552_20775	PF00009	Elongation factor Tu GTP binding domain
AL552_20775	PF00679	Elongation factor G C-terminus
AL552_20775	PF03144	Elongation factor Tu domain 2
AL552_20775	PF03764	Elongation factor G, domain IV
AL552_20775	PF14492	Elongation Factor G, domain II
AL552_20780	PF13481	AAA domain
AL552_20780	PF13541	Subunit ChlI of Mg-chelatase
AL552_20785	PF07238	PilZ domain
AL552_20790	PF00702	haloacid dehalogenase-like hydrolase
AL552_20795	PF10144	AL552_20795
AL552_20800	PF01048	Phosphorylase superfamily
AL552_20805	PF01676	Metalloenzyme superfamily
AL552_20810	PF00591	Glycosyl transferase family, a/b domain
AL552_20810	PF02885	Glycosyl transferase family, helical bundle domain
AL552_20810	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
AL552_20815	PF01791	DeoC/LacD family aldolase
AL552_20825	PF01773	Na+ dependent nucleoside transporter N-terminus
AL552_20825	PF07662	Na+ dependent nucleoside transporter C-terminus
AL552_20825	PF07670	Nucleoside recognition
AL552_20830	PF01026	TatD related DNase
AL552_20835	PF17320	AL552_20835
AL552_20840	PF00009	Elongation factor Tu GTP binding domain
AL552_20840	PF03144	Elongation factor Tu domain 2
AL552_20840	PF16658	AL552_20840
AL552_20845	PF00583	Acetyltransferase (GNAT) family
AL552_20850	PF03603	DNA polymerase III psi subunit
AL552_20860	PF13527	Acetyltransferase (GNAT) domain
AL552_20865	PF02036	SCP-2 sterol transfer family
AL552_20875	PF00563	EAL domain
AL552_20875	PF00990	GGDEF domain
AL552_20875	PF08448	PAS fold
AL552_20875	PF13188	PAS domain
AL552_20880	PF01136	AL552_20880
AL552_20885	PF01136	AL552_20885
AL552_20895	PF01047	MarR family
AL552_20905	PF00013	KH domain
AL552_20905	PF00575	S1 RNA binding domain
AL552_20905	PF01138	3' exoribonuclease family, domain 1
AL552_20905	PF03725	3' exoribonuclease family, domain 2
AL552_20905	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
AL552_20910	PF00312	Ribosomal protein S15
AL552_20915	PF01509	TruB family pseudouridylate synthase (N terminal domain)
AL552_20915	PF09157	Pseudouridine synthase II TruB, C-terminal
AL552_20915	PF16198	AL552_20915
AL552_20920	PF02033	Ribosome-binding factor A
AL552_20925	PF00009	Elongation factor Tu GTP binding domain
AL552_20925	PF03144	Elongation factor Tu domain 2
AL552_20925	PF04760	Translation initiation factor IF-2, N-terminal region
AL552_20925	PF08364	AL552_20925
AL552_20925	PF11987	Translation-initiation factor 2
AL552_20930	PF08529	NusA N-terminal domain
AL552_20930	PF13184	NusA-like KH domain
AL552_20930	PF14520	Helix-hairpin-helix domain
AL552_20935	PF02576	Uncharacterised BCR, YhbC family COG0779
AL552_20935	PF17384	AL552_20935
AL552_20950	PF03840	Preprotein translocase SecG subunit
AL552_20960	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL552_20960	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL552_20960	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL552_20960	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL552_20965	PF00809	Pterin binding enzyme
AL552_20970	PF00004	ATPase family associated with various cellular activities (AAA)
AL552_20970	PF01434	Peptidase family M41
AL552_20970	PF06480	FtsH Extracellular
AL552_20975	PF01728	FtsJ-like methyltransferase
AL552_20980	PF01985	CRS1 / YhbY (CRM) domain
AL552_20985	PF01272	Transcription elongation factor, GreA/GreB, C-term
AL552_20985	PF03449	Transcription elongation factor, N-terminal
AL552_20990	PF13609	Gram-negative porin
AL552_20995	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
AL552_21000	PF01769	Divalent cation transporter
AL552_21005	PF00579	tRNA synthetases class I (W and Y)
AL552_21005	PF01479	S4 domain
AL552_21015	PF00873	AcrB/AcrD/AcrF family
AL552_21025	PF01521	Iron-sulphur cluster biosynthesis
AL552_21030	PF00202	Aminotransferase class-III
AL552_21035	PF01594	AL552_21035
AL552_21040	PF05175	Methyltransferase small domain
AL552_21040	PF08468	Methyltransferase small domain N-terminal
AL552_21045	PF00072	Response regulator receiver domain
AL552_21045	PF00512	His Kinase A (phospho-acceptor) domain
AL552_21045	PF00672	HAMP domain
AL552_21045	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_21050	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL552_21055	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_21060	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_21065	PF00005	ABC transporter
AL552_21065	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL552_21070	PF00005	ABC transporter
AL552_21070	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL552_21075	PF00759	Glycosyl hydrolase family 9
AL552_21075	PF02927	N-terminal ig-like domain of cellulase
AL552_21080	PF01869	BadF/BadG/BcrA/BcrD ATPase family
AL552_21085	PF00728	Glycosyl hydrolase family 20, catalytic domain
AL552_21085	PF02838	Glycosyl hydrolase family 20, domain 2
AL552_21090	PF06165	Glycosyltransferase family 36
AL552_21090	PF17167	AL552_21090
AL552_21095	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL552_21095	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL552_21095	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL552_21095	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL552_21100	PF00005	ABC transporter
AL552_21100	PF08402	TOBE domain
AL552_21105	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_21110	PF13343	Bacterial extracellular solute-binding protein
AL552_21115	PF00909	Ammonium Transporter Family
AL552_21120	PF00543	Nitrogen regulatory protein P-II
AL552_21125	PF06062	AL552_21125
AL552_21130	PF00330	Aconitase family (aconitate hydratase)
AL552_21130	PF06434	Aconitate hydratase 2 N-terminus
AL552_21130	PF11791	Aconitate B N-terminal domain
AL552_21135	PF01734	Patatin-like phospholipase
AL552_21135	PF07244	Surface antigen variable number repeat
AL552_21140	PF00905	Penicillin binding protein transpeptidase domain
AL552_21140	PF00912	Transglycosylase
AL552_21140	PF14814	Bifunctional transglycosylase second domain
AL552_21145	PF00270	DEAD/DEAH box helicase
AL552_21145	PF00271	Helicase conserved C-terminal domain
AL552_21145	PF04408	Helicase associated domain (HA2)
AL552_21145	PF08482	AL552_21145
AL552_21150	PF03749	Sugar fermentation stimulation protein
AL552_21155	PF01258	Prokaryotic dksA/traR C4-type zinc finger
AL552_21160	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AL552_21165	PF01743	Poly A polymerase head domain
AL552_21165	PF12626	Polymerase A arginine-rich C-terminus
AL552_21165	PF12627	Probable RNA and SrmB- binding site of polymerase A
AL552_21170	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
AL552_21175	PF02548	Ketopantoate hydroxymethyltransferase
AL552_21180	PF02569	Pantoate-beta-alanine ligase
AL552_21185	PF03279	AL552_21185
AL552_21195	PF01061	AL552_21195
AL552_21200	PF00005	ABC transporter
AL552_21205	PF00916	AL552_21205
AL552_21205	PF01740	STAS domain
AL552_21210	PF00484	Carbonic anhydrase
AL552_21215	PF00156	Phosphoribosyl transferase domain
AL552_21220	PF00440	Bacterial regulatory proteins, tetR family
AL552_21225	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL552_21225	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL552_21230	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AL552_21230	PF00364	Biotin-requiring enzyme
AL552_21230	PF02817	e3 binding domain
AL552_21235	PF00456	Transketolase, thiamine diphosphate binding domain
AL552_21240	PF00392	Bacterial regulatory proteins, gntR family
AL552_21240	PF07729	FCD domain
AL552_21245	PF01510	N-acetylmuramoyl-L-alanine amidase
AL552_21250	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
AL552_21250	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
AL552_21255	PF00114	Pilin (bacterial filament)
AL552_21255	PF07963	Prokaryotic N-terminal methylation motif
AL552_21260	PF00437	Type II/IV secretion system protein
AL552_21260	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
AL552_21265	PF00482	Type II secretion system (T2SS), protein F
AL552_21270	PF01478	Type IV leader peptidase family
AL552_21270	PF06750	AL552_21270
AL552_21275	PF01121	Dephospho-CoA kinase
AL552_21280	PF07072	Protein of unknown function (DUF1342)
AL552_21285	PF03884	Domain of unknown function (DUF329)
AL552_21290	PF01245	Ribosomal protein L19
AL552_21295	PF01746	tRNA (Guanine-1)-methyltransferase
AL552_21300	PF01782	RimM N-terminal domain
AL552_21300	PF05239	PRC-barrel domain
AL552_21305	PF00886	Ribosomal protein S16
AL552_21310	PF00448	SRP54-type protein, GTPase domain
AL552_21310	PF02881	SRP54-type protein, helical bundle domain
AL552_21310	PF02978	Signal peptide binding domain
AL552_21315	PF01578	AL552_21315
AL552_21320	PF00571	CBS domain
AL552_21320	PF01595	AL552_21320
AL552_21320	PF03471	Transporter associated domain
AL552_21325	PF02664	S-Ribosylhomocysteinase (LuxS)
AL552_21335	PF04262	Glutamate-cysteine ligase
AL552_21340	PF00675	Insulinase (Peptidase family M16)
AL552_21340	PF05193	Peptidase M16 inactive domain
AL552_21345	PF09335	AL552_21345
AL552_21350	PF08240	Alcohol dehydrogenase GroES-like domain
AL552_21350	PF13602	Zinc-binding dehydrogenase
AL552_21355	PF03977	AL552_21355
AL552_21360	PF00364	Biotin-requiring enzyme
AL552_21360	PF00682	HMGL-like
AL552_21360	PF02436	Conserved carboxylase domain
AL552_21365	PF04277	AL552_21365
AL552_21425	PF02599	Global regulator protein family
AL552_21430	PF00696	Amino acid kinase family
AL552_21435	PF01411	tRNA synthetases class II (A)
AL552_21435	PF02272	DHHA1 domain
AL552_21435	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AL552_21440	PF02631	RecX family
AL552_21445	PF00154	recA bacterial DNA recombination protein
AL552_21455	PF00488	MutS domain V
AL552_21455	PF01624	MutS domain I
AL552_21455	PF05188	MutS domain II
AL552_21455	PF05190	MutS family domain IV
AL552_21455	PF05192	MutS domain III
AL552_21460	PF00140	Sigma-70 factor, region 1
AL552_21460	PF04539	Sigma-70 region 3
AL552_21460	PF04542	Sigma-70 region 2
AL552_21460	PF04545	Sigma-70, region 4
AL552_21465	PF01476	LysM domain
AL552_21465	PF01551	Peptidase family M23
AL552_21470	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
AL552_21475	PF01975	Survival protein SurE
AL552_21480	PF01142	tRNA pseudouridine synthase D (TruD)
AL552_21485	PF02542	YgbB family
AL552_21490	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
AL552_21495	PF04977	Septum formation initiator
AL552_21500	PF00113	Enolase, C-terminal TIM barrel domain
AL552_21500	PF03952	Enolase, N-terminal domain
AL552_21505	PF00117	Glutamine amidotransferase class-I
AL552_21505	PF06418	CTP synthase N-terminus
AL552_21510	PF03819	MazG nucleotide pyrophosphohydrolase domain
AL552_21515	PF02824	TGS domain
AL552_21515	PF04607	Region found in RelA / SpoT proteins
AL552_21515	PF13291	ACT domain
AL552_21515	PF13328	HD domain
AL552_21525	PF01938	TRAM domain
AL552_21525	PF05958	tRNA (Uracil-5-)-methyltransferase
AL552_21535	PF00072	Response regulator receiver domain
AL552_21535	PF00512	His Kinase A (phospho-acceptor) domain
AL552_21535	PF01627	Hpt domain
AL552_21535	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_21535	PF09984	AL552_21535
AL552_21540	PF01648	4'-phosphopantetheinyl transferase superfamily
AL552_21545	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
AL552_21550	PF02565	Recombination protein O C terminal
AL552_21550	PF11967	Recombination protein O N terminal
AL552_21555	PF01926	50S ribosome-binding GTPase
AL552_21555	PF07650	KH domain
AL552_21560	PF00035	Double-stranded RNA binding motif
AL552_21560	PF14622	Ribonuclease-III-like
AL552_21565	PF00717	Peptidase S24-like
AL552_21565	PF10502	Signal peptidase, peptidase S26
AL552_21570	PF00009	Elongation factor Tu GTP binding domain
AL552_21570	PF00679	Elongation factor G C-terminus
AL552_21570	PF03144	Elongation factor Tu domain 2
AL552_21570	PF06421	GTP-binding protein LepA C-terminus
AL552_21575	PF04246	AL552_21575
AL552_21580	PF03888	MucB/RseB family
AL552_21580	PF17188	AL552_21580
AL552_21585	PF03872	Anti sigma-E protein RseA, N-terminal domain
AL552_21585	PF03873	Anti sigma-E protein RseA, C-terminal domain
AL552_21590	PF04542	Sigma-70 region 2
AL552_21590	PF08281	Sigma-70, region 4
AL552_21600	PF00890	FAD binding domain
AL552_21600	PF02910	Fumarate reductase flavoprotein C-term
AL552_21610	PF03937	Flavinator of succinate dehydrogenase
AL552_21615	PF01571	Aminomethyltransferase folate-binding domain
AL552_21620	PF04073	Aminoacyl-tRNA editing domain
AL552_21625	PF06526	Protein of unknown function (DUF1107)
AL552_21630	PF01494	FAD binding domain
AL552_21635	PF01494	FAD binding domain
AL552_21640	PF03695	Uncharacterised protein family (UPF0149)
AL552_21650	PF05164	Cell division protein ZapA
AL552_21660	PF01812	5-formyltetrahydrofolate cyclo-ligase family
AL552_21665	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
AL552_21670	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL552_21670	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL552_21675	PF04402	Protein of unknown function (DUF541)
AL552_21680	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_21680	PF03466	LysR substrate binding domain
AL552_21685	PF01810	AL552_21685
AL552_21690	PF04073	Aminoacyl-tRNA editing domain
AL552_21695	PF00924	Mechanosensitive ion channel
AL552_21695	PF05552	Conserved TM helix
AL552_21700	PF01116	Fructose-bisphosphate aldolase class-II
AL552_21705	PF00162	Phosphoglycerate kinase
AL552_21710	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL552_21710	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AL552_21715	PF00593	TonB dependent receptor
AL552_21715	PF07715	TonB-dependent Receptor Plug Domain
AL552_21720	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_21720	PF03466	LysR substrate binding domain
AL552_21725	PF00456	Transketolase, thiamine diphosphate binding domain
AL552_21725	PF02779	Transketolase, pyrimidine binding domain
AL552_21725	PF02780	Transketolase, C-terminal domain
AL552_21735	PF00438	S-adenosylmethionine synthetase, N-terminal domain
AL552_21735	PF02772	S-adenosylmethionine synthetase, central domain
AL552_21735	PF02773	S-adenosylmethionine synthetase, C-terminal domain
AL552_21740	PF09955	AL552_21740
AL552_21745	PF10263	AL552_21745
AL552_21745	PF17283	AL552_21745
AL552_21750	PF04231	Endonuclease I
AL552_21755	PF04452	RNA methyltransferase
AL552_21760	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
AL552_21760	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
AL552_21765	PF02622	Uncharacterized ACR, COG1678
AL552_21770	PF03652	Uncharacterised protein family (UPF0081)
AL552_21775	PF00437	Type II/IV secretion system protein
AL552_21780	PF00437	Type II/IV secretion system protein
AL552_21785	PF01168	Alanine racemase, N-terminal domain
AL552_21790	PF03807	NADP oxidoreductase coenzyme F420-dependent
AL552_21790	PF14748	Pyrroline-5-carboxylate reductase dimerisation
AL552_21795	PF02325	AL552_21795
AL552_21800	PF02594	Uncharacterised ACR, YggU family COG1872
AL552_21805	PF14467	Domain of unknown function (DUF4426)
AL552_21810	PF01725	Ham1 family
AL552_21815	PF04055	Radical SAM superfamily
AL552_21815	PF06969	HemN C-terminal domain
AL552_21820	PF04960	Glutaminase
AL552_21825	PF01170	Putative RNA methylase family UPF0020
AL552_21830	PF02390	Putative methyltransferase
AL552_21835	PF00633	Helix-hairpin-helix motif
AL552_21835	PF00730	HhH-GPD superfamily base excision DNA repair protein
AL552_21835	PF10576	Iron-sulfur binding domain of endonuclease III
AL552_21835	PF14815	NUDIX domain
AL552_21840	PF04362	Bacterial Fe(2+) trafficking
AL552_21845	PF01464	Transglycosylase SLT domain
AL552_21845	PF11873	Domain of unknown function (DUF3393)
AL552_21885	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL552_21885	PF17200	AL552_21885
AL552_21915	PF00171	Aldehyde dehydrogenase family
AL552_21955	PF01966	HD domain
AL552_21955	PF11871	AL552_21955
AL552_21965	PF04794	YdjC-like protein
AL552_21970	PF02056	Family 4 glycosyl hydrolase
AL552_21970	PF11975	Family 4 glycosyl hydrolase C-terminal domain
AL552_21975	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
AL552_21980	PF02378	Phosphotransferase system, EIIC
AL552_21985	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL552_21990	PF01522	Polysaccharide deacetylase
AL552_22000	PF00106	short chain dehydrogenase
AL552_22005	PF10011	Predicted membrane protein (DUF2254)
AL552_22010	PF06271	AL552_22010
AL552_22015	PF03739	AL552_22015
AL552_22020	PF03739	AL552_22020
AL552_22025	PF00883	Cytosol aminopeptidase family, catalytic domain
AL552_22025	PF02789	Cytosol aminopeptidase family, N-terminal domain
AL552_22030	PF04364	DNA polymerase III chi subunit, HolC
AL552_22035	PF00133	tRNA synthetases class I (I, L, M and V)
AL552_22035	PF08264	Anticodon-binding domain of tRNA
AL552_22035	PF10458	Valyl tRNA synthetase tRNA binding arm
AL552_22040	PF09834	AL552_22040
AL552_22045	PF00583	Acetyltransferase (GNAT) family
AL552_22045	PF12802	MarR family
AL552_22055	PF06877	Regulator of ribonuclease activity B
AL552_22060	PF02274	Amidinotransferase
AL552_22065	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AL552_22065	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AL552_22075	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AL552_22075	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AL552_22080	PF01948	Aspartate carbamoyltransferase regulatory chain, allosteric domain
AL552_22080	PF02748	Aspartate carbamoyltransferase regulatory chain, metal binding domain
AL552_22085	PF01042	Endoribonuclease L-PSP
AL552_22090	PF01553	Acyltransferase
AL552_22095	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AL552_22100	PF01722	BolA-like protein
AL552_22105	PF13466	STAS domain
AL552_22110	PF05494	Toluene tolerance, Ttg2
AL552_22115	PF02470	AL552_22115
AL552_22120	PF02405	AL552_22120
AL552_22125	PF00005	ABC transporter
AL552_22130	PF01699	Sodium/calcium exchanger protein
AL552_22135	PF00571	CBS domain
AL552_22135	PF01380	SIS domain
AL552_22140	PF06835	Lipopolysaccharide-assembly, LptC-related
AL552_22145	PF03968	OstA-like protein
AL552_22150	PF00005	ABC transporter
AL552_22150	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL552_22155	PF00309	AL552_22155
AL552_22155	PF04552	Sigma-54, DNA binding domain
AL552_22155	PF04963	Sigma-54 factor, core binding domain
AL552_22160	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
AL552_22165	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL552_22170	PF03668	AL552_22170
AL552_22175	PF00381	PTS HPr component phosphorylation site
AL552_22180	PF00571	CBS domain
AL552_22180	PF01769	Divalent cation transporter
AL552_22180	PF03448	MgtE intracellular N domain
AL552_22185	PF01523	Putative modulator of DNA gyrase
AL552_22190	PF04751	Protein of unknown function (DUF615)
AL552_22195	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL552_22195	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL552_22200	PF00849	RNA pseudouridylate synthase
AL552_22210	PF00176	SNF2 family N-terminal domain
AL552_22210	PF00271	Helicase conserved C-terminal domain
AL552_22210	PF12137	RNA polymerase recycling family C-terminal
AL552_22215	PF02562	PhoH-like protein
AL552_22215	PF13638	PIN domain
AL552_22220	PF01523	Putative modulator of DNA gyrase
AL552_22225	PF00795	Carbon-nitrogen hydrolase
AL552_22230	PF13116	AL552_22230
AL552_22230	PF13502	AL552_22230
AL552_22235	PF00575	S1 RNA binding domain
AL552_22235	PF10150	Ribonuclease E/G family
AL552_22240	PF02545	Maf-like protein
AL552_22245	PF04093	AL552_22245
AL552_22250	PF04085	rod shape-determining protein MreC
AL552_22255	PF06723	MreB/Mbl protein
AL552_22270	PF07963	Prokaryotic N-terminal methylation motif
AL552_22275	PF07963	Prokaryotic N-terminal methylation motif
AL552_22280	PF07963	Prokaryotic N-terminal methylation motif
AL552_22290	PF07963	Prokaryotic N-terminal methylation motif
AL552_22300	PF00482	Type II secretion system (T2SS), protein F
AL552_22305	PF00437	Type II/IV secretion system protein
AL552_22305	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
AL552_22315	PF13401	AAA domain
AL552_22320	PF00263	AL552_22320
AL552_22320	PF07655	AL552_22320
AL552_22330	PF04612	Type II secretion system (T2SS), protein M
AL552_22340	PF00563	EAL domain
AL552_22340	PF00990	GGDEF domain
AL552_22340	PF17157	AL552_22340
AL552_22345	PF00436	Single-strand binding protein family
AL552_22350	PF00196	Bacterial regulatory proteins, luxR family
AL552_22355	PF00483	Nucleotidyl transferase
AL552_22360	PF00005	ABC transporter
AL552_22365	PF04932	AL552_22365
AL552_22365	PF11846	AL552_22365
AL552_22365	PF15864	AL552_22365
AL552_22370	PF00266	Aminotransferase class-V
AL552_22385	PF00696	Amino acid kinase family
AL552_22395	PF00999	Sodium/hydrogen exchanger family
AL552_22460	PF01507	Phosphoadenosine phosphosulfate reductase family
AL552_22465	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AL552_22465	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AL552_22470	PF00175	Oxidoreductase NAD-binding domain
AL552_22470	PF00258	Flavodoxin
AL552_22470	PF00667	FAD binding domain
AL552_22480	PF13505	Outer membrane protein beta-barrel domain
AL552_22485	PF09583	AL552_22485
AL552_22490	PF01207	Dihydrouridine synthase (Dus)
AL552_22495	PF01475	Ferric uptake regulator family
AL552_22500	PF13690	Chemotaxis phosphatase CheX
AL552_22505	PF00342	Phosphoglucose isomerase
AL552_22510	PF01894	Uncharacterised protein family UPF0047
AL552_22520	PF00772	DnaB-like helicase N terminal domain
AL552_22520	PF03796	DnaB-like helicase C terminal domain
AL552_22525	PF04338	Protein of unknown function, DUF481
AL552_22530	PF01281	Ribosomal protein L9, N-terminal domain
AL552_22530	PF03948	Ribosomal protein L9, C-terminal domain
AL552_22535	PF01084	Ribosomal protein S18
AL552_22540	PF00436	Single-strand binding protein family
AL552_22545	PF01250	Ribosomal protein S6
AL552_22550	PF00834	Ribulose-phosphate 3 epimerase family
AL552_22555	PF02086	D12 class N6 adenine-specific DNA methyltransferase
AL552_22560	PF05036	Sporulation related domain
AL552_22560	PF13401	AAA domain
AL552_22565	PF01761	3-dehydroquinate synthase
AL552_22570	PF01202	Shikimate kinase
AL552_22575	PF00263	AL552_22575
AL552_22575	PF03958	Bacterial type II/III secretion system short domain
AL552_22580	PF04351	Pilus assembly protein, PilP
AL552_22585	PF04350	Pilus assembly protein, PilO
AL552_22590	PF05137	AL552_22590
AL552_22595	PF11104	Type IV pilus assembly protein PilM;
AL552_22600	PF00905	Penicillin binding protein transpeptidase domain
AL552_22600	PF00912	Transglycosylase
AL552_22600	PF17092	AL552_22600
AL552_22605	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_22605	PF03466	LysR substrate binding domain
AL552_22610	PF00462	Glutaredoxin
AL552_22610	PF08534	Redoxin
AL552_22615	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL552_22615	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL552_22625	PF12292	AL552_22625
AL552_22630	PF00206	Lyase
AL552_22630	PF00583	Acetyltransferase (GNAT) family
AL552_22630	PF14698	Argininosuccinate lyase C-terminal
AL552_22635	PF00764	Arginosuccinate synthase
AL552_22640	PF00696	Amino acid kinase family
AL552_22645	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AL552_22645	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AL552_22650	PF01546	Peptidase family M20/M25/M40
AL552_22650	PF07687	Peptidase dimerisation domain
AL552_22655	PF00311	Phosphoenolpyruvate carboxylase
AL552_22660	PF03551	Transcriptional regulator PadR-like family
AL552_22660	PF10400	Virulence activator alpha C-term
AL552_22665	PF02219	Methylenetetrahydrofolate reductase
AL552_22670	PF00696	Amino acid kinase family
AL552_22670	PF00742	Homoserine dehydrogenase
AL552_22670	PF03447	Homoserine dehydrogenase, NAD binding domain
AL552_22675	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL552_22685	PF00390	Malic enzyme, N-terminal domain
AL552_22685	PF03949	Malic enzyme, NAD binding domain
AL552_22690	PF00210	Ferritin-like domain
AL552_22695	PF04324	BFD-like [2Fe-2S] binding domain
AL552_22700	PF00009	Elongation factor Tu GTP binding domain
AL552_22700	PF03143	Elongation factor Tu C-terminal domain
AL552_22700	PF03144	Elongation factor Tu domain 2
AL552_22705	PF00009	Elongation factor Tu GTP binding domain
AL552_22705	PF00679	Elongation factor G C-terminus
AL552_22705	PF03144	Elongation factor Tu domain 2
AL552_22705	PF03764	Elongation factor G, domain IV
AL552_22705	PF14492	Elongation Factor G, domain II
AL552_22710	PF00177	Ribosomal protein S7p/S5e
AL552_22715	PF00164	Ribosomal protein S12/S23
AL552_22720	PF04077	DsrH like protein
AL552_22725	PF02635	DsrE/DsrF-like family
AL552_22730	PF02635	DsrE/DsrF-like family
AL552_22735	PF08348	AL552_22735
AL552_22735	PF13309	AL552_22735
AL552_22740	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL552_22740	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
AL552_22745	PF13360	PQQ-like domain
AL552_22750	PF04102	SlyX
AL552_22755	PF01112	Asparaginase
AL552_22760	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL552_22765	PF09526	AL552_22765
AL552_22770	PF00999	Sodium/hydrogen exchanger family
AL552_22770	PF02254	TrkA-N domain
AL552_22775	PF02525	Flavodoxin-like fold
AL552_22785	PF00005	ABC transporter
AL552_22785	PF12848	ABC transporter
AL552_22790	PF09523	AL552_22790
AL552_22795	PF00561	alpha/beta hydrolase fold
AL552_22800	PF06794	Uncharacterised protein family (UPF0270)
AL552_22805	PF00485	Phosphoribulokinase / Uridine kinase family
AL552_22810	PF00027	Cyclic nucleotide-binding domain
AL552_22810	PF00325	Bacterial regulatory proteins, crp family
AL552_22815	PF07063	Domain of unknown function (DUF1338)
AL552_22820	PF00171	Aldehyde dehydrogenase family
AL552_22825	PF04958	Arginine N-succinyltransferase beta subunit
AL552_22830	PF00202	Aminotransferase class-III
AL552_22835	PF00117	Glutamine amidotransferase class-I
AL552_22840	PF00932	Lamin Tail Domain
AL552_22840	PF03372	Endonuclease/Exonuclease/phosphatase family
AL552_22850	PF00579	tRNA synthetases class I (W and Y)
AL552_22855	PF13419	Haloacid dehalogenase-like hydrolase
AL552_22860	PF00588	SpoU rRNA Methylase family
AL552_22860	PF08032	RNA 2'-O ribose methyltransferase substrate binding
AL552_22865	PF00575	S1 RNA binding domain
AL552_22865	PF00773	RNB domain
AL552_22865	PF08206	Ribonuclease B OB domain
AL552_22865	PF08461	Ribonuclease R winged-helix domain
AL552_22870	PF02082	Transcriptional regulator
AL552_22875	PF00042	Globin
AL552_22875	PF00175	Oxidoreductase NAD-binding domain
AL552_22875	PF00970	Oxidoreductase FAD-binding domain
AL552_22880	PF08238	Sel1 repeat
AL552_22890	PF00709	Adenylosuccinate synthetase
AL552_22895	PF09838	AL552_22895
AL552_22900	PF01145	SPFH domain / Band 7 family
AL552_22905	PF01145	SPFH domain / Band 7 family
AL552_22905	PF12221	AL552_22905
AL552_22910	PF01926	50S ribosome-binding GTPase
AL552_22910	PF13167	AL552_22910
AL552_22910	PF16360	AL552_22910
AL552_22915	PF17209	AL552_22915
AL552_22920	PF01715	IPP transferase
AL552_22925	PF01119	DNA mismatch repair protein, C-terminal domain
AL552_22925	PF08676	MutL C terminal dimerisation domain
AL552_22925	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_22930	PF01476	LysM domain
AL552_22930	PF01520	N-acetylmuramoyl-L-alanine amidase
AL552_22930	PF11741	AMIN domain
AL552_22935	PF02367	Uncharacterised P-loop hydrolase UPF0079
AL552_22945	PF08331	AL552_22945
AL552_22945	PF13484	AL552_22945
AL552_23010	PF00929	Exonuclease
AL552_23015	PF03193	Protein of unknown function, DUF258
AL552_23020	PF02666	AL552_23020
AL552_23025	PF00939	Sodium:sulfate symporter transmembrane region
AL552_23030	PF00892	EamA-like transporter family
AL552_23035	PF01676	Metalloenzyme superfamily
AL552_23035	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
AL552_23040	PF00581	Rhodanese-like domain
AL552_23045	PF02556	Preprotein translocase subunit SecB
AL552_23050	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
AL552_23050	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
AL552_23055	PF00132	Bacterial transferase hexapeptide (six repeats)
AL552_23055	PF06426	Serine acetyltransferase, N-terminal
AL552_23060	PF01551	Peptidase family M23
AL552_23070	PF00440	Bacterial regulatory proteins, tetR family
AL552_23070	PF13972	Bacterial transcriptional repressor
AL552_23075	PF04892	AL552_23075
AL552_23080	PF00152	tRNA synthetases class II (D, K and N)
AL552_23085	PF00890	FAD binding domain
AL552_23085	PF02910	Fumarate reductase flavoprotein C-term
AL552_23090	PF13085	2Fe-2S iron-sulfur cluster binding domain
AL552_23090	PF13183	4Fe-4S dicluster domain
AL552_23095	PF02300	Fumarate reductase subunit C
AL552_23100	PF02313	Fumarate reductase subunit D
AL552_23105	PF01145	SPFH domain / Band 7 family
AL552_23110	PF01132	Elongation factor P (EF-P) OB domain
AL552_23110	PF08207	Elongation factor P (EF-P) KOW-like domain
AL552_23110	PF09285	Elongation factor P, C-terminal
AL552_23115	PF04055	Radical SAM superfamily
AL552_23115	PF13353	4Fe-4S single cluster domain
AL552_23120	PF02308	AL552_23120
AL552_23130	PF00118	TCP-1/cpn60 chaperonin family
AL552_23135	PF00166	Chaperonin 10 Kd subunit
AL552_23140	PF01554	MatE
AL552_23145	PF00365	Phosphofructokinase
AL552_23150	PF01545	Cation efflux family
AL552_23150	PF16916	AL552_23150
AL552_23155	PF07813	LTXXQ motif family protein
AL552_23160	PF00072	Response regulator receiver domain
AL552_23160	PF00486	Transcriptional regulatory protein, C terminal
AL552_23165	PF00512	His Kinase A (phospho-acceptor) domain
AL552_23165	PF00672	HAMP domain
AL552_23165	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_23165	PF16527	AL552_23165
AL552_23170	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
AL552_23170	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AL552_23175	PF00588	SpoU rRNA Methylase family
AL552_23180	PF04186	AL552_23180
AL552_23185	PF00206	Lyase
AL552_23185	PF10415	Fumarase C C-terminus
AL552_23190	PF03605	AL552_23190
AL552_23195	PF02683	AL552_23195
AL552_23195	PF11412	Disulphide bond corrector protein DsbC
AL552_23195	PF13899	Thioredoxin-like
AL552_23200	PF00072	Response regulator receiver domain
AL552_23200	PF00196	Bacterial regulatory proteins, luxR family
AL552_23205	PF00999	Sodium/hydrogen exchanger family
AL552_23205	PF02080	TrkA-C domain
AL552_23205	PF03471	Transporter associated domain
AL552_23210	PF13937	AL552_23210
AL552_23215	PF00474	Sodium:solute symporter family
AL552_23230	PF00206	Lyase
AL552_23230	PF10415	Fumarase C C-terminus
AL552_23235	PF00072	Response regulator receiver domain
AL552_23235	PF00512	His Kinase A (phospho-acceptor) domain
AL552_23235	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_23235	PF12860	AL552_23235
AL552_23240	PF12832	MFS_1 like family
AL552_23245	PF00027	Cyclic nucleotide-binding domain
AL552_23245	PF03445	AL552_23245
AL552_23245	PF10335	AL552_23245
AL552_23250	PF00929	Exonuclease
AL552_23255	PF00501	AMP-binding enzyme
AL552_23255	PF13193	AMP-binding enzyme C-terminal domain
AL552_23255	PF16177	AL552_23255
AL552_23260	PF01220	Dehydroquinase class II
AL552_23265	PF00364	Biotin-requiring enzyme
AL552_23270	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
AL552_23270	PF02785	Biotin carboxylase C-terminal domain
AL552_23270	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AL552_23280	PF06325	Ribosomal protein L11 methyltransferase (PrmA)
AL552_23285	PF01207	Dihydrouridine synthase (Dus)
AL552_23290	PF02954	Bacterial regulatory protein, Fis family
AL552_23300	PF00005	ABC transporter
AL552_23300	PF12848	ABC transporter
AL552_23360	PF01276	Orn/Lys/Arg decarboxylase, major domain
AL552_23360	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
AL552_23360	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
AL552_23365	PF13520	Amino acid permease
AL552_23375	PF00486	Transcriptional regulatory protein, C terminal
AL552_23380	PF00376	MerR family regulatory protein
AL552_23380	PF09278	MerR, DNA binding
AL552_23390	PF01808	AICARFT/IMPCHase bienzyme
AL552_23390	PF02142	MGS-like domain
AL552_23400	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
AL552_23400	PF02843	Phosphoribosylglycinamide synthetase, C domain
AL552_23400	PF02844	Phosphoribosylglycinamide synthetase, N domain
AL552_23405	PF07356	AL552_23405
AL552_23410	PF00216	Bacterial DNA-binding protein
AL552_23415	PF00571	CBS domain
AL552_23415	PF01595	AL552_23415
AL552_23420	PF04222	Protein of unknown function (DUF416)
AL552_23425	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL552_23430	PF03167	Uracil DNA glycosylase superfamily
AL552_23435	PF01208	Uroporphyrinogen decarboxylase (URO-D)
AL552_23440	PF00293	NUDIX domain
AL552_23440	PF09297	NADH pyrophosphatase zinc ribbon domain
AL552_23445	PF04353	Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
AL552_23450	PF00623	RNA polymerase Rpb1, domain 2
AL552_23450	PF04983	RNA polymerase Rpb1, domain 3
AL552_23450	PF04997	RNA polymerase Rpb1, domain 1
AL552_23450	PF04998	RNA polymerase Rpb1, domain 5
AL552_23450	PF05000	RNA polymerase Rpb1, domain 4
AL552_23455	PF00562	RNA polymerase Rpb2, domain 6
AL552_23455	PF04560	RNA polymerase Rpb2, domain 7
AL552_23455	PF04561	RNA polymerase Rpb2, domain 2
AL552_23455	PF04563	RNA polymerase beta subunit
AL552_23455	PF04565	RNA polymerase Rpb2, domain 3
AL552_23455	PF10385	RNA polymerase beta subunit external 1 domain
AL552_23460	PF00542	Ribosomal protein L7/L12 C-terminal domain
AL552_23460	PF16320	AL552_23460
AL552_23465	PF00466	Ribosomal protein L10
AL552_23470	PF00687	Ribosomal protein L1p/L10e family
AL552_23475	PF00298	Ribosomal protein L11, RNA binding domain
AL552_23475	PF03946	Ribosomal protein L11, N-terminal domain
AL552_23480	PF00467	KOW motif
AL552_23480	PF02357	Transcription termination factor nusG
AL552_23485	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
AL552_23495	PF00009	Elongation factor Tu GTP binding domain
AL552_23495	PF03143	Elongation factor Tu C-terminal domain
AL552_23495	PF03144	Elongation factor Tu domain 2
AL552_23525	PF02237	Biotin protein ligase C terminal domain
AL552_23525	PF03099	Biotin/lipoate A/B protein ligase family
AL552_23525	PF08279	HTH domain
AL552_23530	PF01565	FAD binding domain
AL552_23530	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
AL552_23535	PF13508	Acetyltransferase (GNAT) domain
AL552_23540	PF13091	PLD-like domain
AL552_23605	PF00076	RNA recognition motif
AL552_23610	PF01177	Asp/Glu/Hydantoin racemase
AL552_23615	PF01902	ATP-binding region
AL552_23620	PF00593	TonB dependent receptor
AL552_23620	PF07715	TonB-dependent Receptor Plug Domain
AL552_23625	PF05958	tRNA (Uracil-5-)-methyltransferase
AL552_23635	PF11726	AL552_23635
AL552_23645	PF01926	50S ribosome-binding GTPase
AL552_23650	PF05930	Prophage CP4-57 regulatory protein (AlpA)
AL552_23655	PF10980	Protein of unknown function (DUF2787)
AL552_23660	PF10980	Protein of unknown function (DUF2787)
AL552_23665	PF04002	RadC-like JAB domain
AL552_23670	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
AL552_23670	PF04851	Type III restriction enzyme, res subunit
AL552_23670	PF11867	AL552_23670
AL552_23680	PF01420	Type I restriction modification DNA specificity domain
AL552_23685	PF02384	N-6 DNA Methylase
AL552_23685	PF12161	HsdM N-terminal domain
AL552_23705	PF00563	EAL domain
AL552_23705	PF00990	GGDEF domain
AL552_23710	PF04976	AL552_23710
AL552_23715	PF13247	4Fe-4S dicluster domain
AL552_23720	PF00384	Molybdopterin oxidoreductase
AL552_23720	PF01568	Molydopterin dinucleotide binding domain
AL552_23720	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL552_23725	PF02613	Nitrate reductase delta subunit
AL552_23730	PF00037	4Fe-4S binding domain
AL552_23730	PF12800	4Fe-4S binding domain
AL552_23730	PF12838	4Fe-4S dicluster domain
AL552_23735	PF00990	GGDEF domain
AL552_23735	PF08448	PAS fold
AL552_23740	PF00589	Phage integrase family
AL552_23740	PF13356	Domain of unknown function (DUF4102)
AL552_23745	PF07226	AL552_23745
AL552_23750	PF00440	Bacterial regulatory proteins, tetR family
AL552_23755	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL552_23755	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL552_23760	PF01554	MatE
AL552_23765	PF04072	Leucine carboxyl methyltransferase
AL552_23775	PF00717	Peptidase S24-like
AL552_23775	PF01726	LexA DNA binding domain
AL552_23785	PF01553	Acyltransferase
AL552_23790	PF01040	UbiA prenyltransferase family
AL552_23795	PF04345	Chorismate lyase
AL552_23800	PF03748	AL552_23800
AL552_23805	PF01694	Rhomboid family
AL552_23805	PF12122	Protein of unknown function (DUF3582)
AL552_23810	PF00581	Rhodanese-like domain
AL552_23815	PF00140	Sigma-70 factor, region 1
AL552_23815	PF04542	Sigma-70 region 2
AL552_23815	PF04545	Sigma-70, region 4
AL552_23825	PF00005	ABC transporter
AL552_23830	PF00448	SRP54-type protein, GTPase domain
AL552_23830	PF02881	SRP54-type protein, helical bundle domain
AL552_23835	PF03602	Conserved hypothetical protein 95
AL552_23840	PF06611	AL552_23840
AL552_23845	PF01914	AL552_23845
AL552_23850	PF10678	AL552_23850
AL552_23855	PF07947	AL552_23855
AL552_23870	PF13643	AL552_23870
AL552_23875	PF10694	Protein of unknown function (DUF2500)
AL552_23880	PF01757	AL552_23880
AL552_23885	PF07690	Major Facilitator Superfamily
AL552_23890	PF05706	Cyclin-dependent kinase inhibitor 3 (CDKN3)
AL552_23895	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL552_23895	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AL552_23900	PF01022	Bacterial regulatory protein, arsR family
AL552_23905	PF00563	EAL domain
AL552_23905	PF08668	HDOD domain
AL552_23910	PF01810	AL552_23910
AL552_23915	PF12146	Putative lysophospholipase
AL552_23920	PF08282	haloacid dehalogenase-like hydrolase
AL552_23925	PF01878	EVE domain
AL552_23935	PF03942	AL552_23935
AL552_23940	PF00563	EAL domain
AL552_23940	PF00990	GGDEF domain
AL552_23940	PF08495	AL552_23940
AL552_23940	PF10442	AL552_23940
AL552_23945	PF13419	Haloacid dehalogenase-like hydrolase
AL552_23950	PF00589	Phage integrase family
AL552_23950	PF02899	Phage integrase, N-terminal SAM-like domain
AL552_23955	PF04340	Protein of unknown function, DUF484
AL552_23960	PF01678	Diaminopimelate epimerase
AL552_23965	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
AL552_23965	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AL552_23975	PF01491	Frataxin-like domain
AL552_23980	PF01295	AL552_23980
AL552_23980	PF12633	AL552_23980
AL552_23985	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
AL552_23985	PF03900	Porphobilinogen deaminase, C-terminal domain
AL552_23990	PF02602	Uroporphyrinogen-III synthase HemD
AL552_23995	PF04375	AL552_23995
AL552_24000	PF07219	AL552_24000
AL552_24040	PF00175	Oxidoreductase NAD-binding domain
AL552_24045	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL552_24050	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
AL552_24065	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL552_24065	PF07497	Rho termination factor, RNA-binding domain
AL552_24065	PF07498	Rho termination factor, N-terminal domain
AL552_24070	PF00085	Thioredoxin
AL552_24075	PF00270	DEAD/DEAH box helicase
AL552_24075	PF00271	Helicase conserved C-terminal domain
AL552_24080	PF02541	Ppx/GppA phosphatase family
AL552_24085	PF02592	AL552_24085
AL552_24090	PF12305	AL552_24090
AL552_24095	PF00270	DEAD/DEAH box helicase
AL552_24095	PF00271	Helicase conserved C-terminal domain
AL552_24095	PF00570	HRDC domain
AL552_24095	PF09382	RQC domain
AL552_24095	PF16124	AL552_24095
AL552_24100	PF00892	EamA-like transporter family
AL552_24105	PF02311	AraC-like ligand binding domain
AL552_24105	PF12833	Helix-turn-helix domain
AL552_24125	PF00580	UvrD/REP helicase N-terminal domain
AL552_24125	PF13361	UvrD-like helicase C-terminal domain
AL552_24130	PF10048	AL552_24130
AL552_24135	PF05114	Protein of unknown function (DUF692)
AL552_24140	PF09836	Uncharacterized protein conserved in bacteria (DUF2063)
AL552_24145	PF07681	AL552_24145
AL552_24155	PF07690	Major Facilitator Superfamily
AL552_24160	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_24160	PF03466	LysR substrate binding domain
AL552_24165	PF00557	Metallopeptidase family M24
AL552_24165	PF01321	Creatinase/Prolidase N-terminal domain
AL552_24165	PF16188	AL552_24165
AL552_24165	PF16189	AL552_24165
AL552_24170	PF04055	Radical SAM superfamily
AL552_24170	PF06968	Biotin and Thiamin Synthesis associated domain
AL552_24175	PF05690	Thiazole biosynthesis protein ThiG
AL552_24180	PF02597	ThiS family
AL552_24185	PF00899	ThiF family
AL552_24190	PF02581	Thiamine monophosphate synthase/TENI
AL552_24195	PF01964	ThiC family
AL552_24195	PF13667	ThiC-associated domain
AL552_24200	PF02537	AL552_24200
AL552_24205	PF00394	Multicopper oxidase
AL552_24205	PF07731	Multicopper oxidase
AL552_24205	PF07732	Multicopper oxidase
AL552_24205	PF10518	TAT (twin-arginine translocation) pathway signal sequence
AL552_24255	PF12724	Flavodoxin domain
AL552_24260	PF02386	Cation transport protein
AL552_24265	PF01205	Uncharacterized protein family UPF0029
AL552_24265	PF09186	Domain of unknown function (DUF1949)
AL552_24270	PF00378	Enoyl-CoA hydratase/isomerase family
AL552_24270	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AL552_24270	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AL552_24275	PF00108	Thiolase, N-terminal domain
AL552_24275	PF02803	Thiolase, C-terminal domain
AL552_24280	PF00107	Zinc-binding dehydrogenase
AL552_24280	PF08240	Alcohol dehydrogenase GroES-like domain
AL552_24285	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_24285	PF03466	LysR substrate binding domain
AL552_24295	PF01206	Sulfurtransferase TusA
AL552_24305	PF01169	AL552_24305
AL552_24310	PF02091	Glycyl-tRNA synthetase alpha subunit
AL552_24315	PF02092	AL552_24315
AL552_24315	PF05746	DALR anticodon binding domain
AL552_24320	PF00128	Alpha amylase, catalytic domain
AL552_24325	PF00155	Aminotransferase class I and II
AL552_24330	PF00011	Hsp20/alpha crystallin family
AL552_24340	PF01272	Transcription elongation factor, GreA/GreB, C-term
AL552_24345	PF00204	DNA gyrase B
AL552_24345	PF00986	DNA gyrase B subunit, carboxyl terminus
AL552_24345	PF01751	Toprim domain
AL552_24345	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_24350	PF02463	RecF/RecN/SMC N terminal domain
AL552_24355	PF00712	DNA polymerase III beta subunit, N-terminal domain
AL552_24355	PF02767	DNA polymerase III beta subunit, central domain
AL552_24355	PF02768	DNA polymerase III beta subunit, C-terminal domain
AL552_24360	PF00308	Bacterial dnaA  protein
AL552_24360	PF08299	Bacterial dnaA protein helix-turn-helix
AL552_24360	PF11638	DnaA N-terminal domain
AL552_24370	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL552_24375	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_24380	PF00005	ABC transporter
AL552_24385	PF00468	Ribosomal protein L34
AL552_24390	PF00825	Ribonuclease P
AL552_24395	PF01809	AL552_24395
AL552_24400	PF02096	60Kd inner membrane protein
AL552_24400	PF14849	YidC periplasmic domain
AL552_24405	PF01926	50S ribosome-binding GTPase
AL552_24405	PF10396	GTP-binding protein TrmE N-terminus
AL552_24405	PF12631	Catalytic cysteine-containing C-terminus of GTPase, MnmE
AL552_24410	PF00589	Phage integrase family
AL552_24410	PF13102	Phage integrase SAM-like domain
AL552_24410	PF17293	AL552_24410
AL552_24415	PF12728	Helix-turn-helix domain
AL552_24420	PF06048	AL552_24420
AL552_24425	PF05930	Prophage CP4-57 regulatory protein (AlpA)
AL552_24430	PF13280	AL552_24430
AL552_24435	PF08849	Putative inner membrane protein (DUF1819)
AL552_24440	PF08747	Domain of unknown function (DUF1788)
AL552_24450	PF13304	AAA domain
AL552_24460	PF07669	Eco57I restriction-modification methylase
AL552_24465	PF08665	AL552_24465
AL552_24470	PF05362	Lon protease (S16) C-terminal proteolytic domain
AL552_24470	PF13337	AL552_24470
AL552_24505	PF12844	Helix-turn-helix domain
AL552_24515	PF00258	Flavodoxin
AL552_24520	PF01134	Glucose inhibited division protein A
AL552_24520	PF13932	GidA associated domain 3
AL552_24525	PF02527	rRNA small subunit methyltransferase G
AL552_24530	PF13614	AAA domain
AL552_24535	PF02195	ParB-like nuclease domain
AL552_24540	PF03899	AL552_24540
AL552_24545	PF00119	ATP synthase A chain
AL552_24550	PF00137	ATP synthase subunit C
AL552_24555	PF00430	ATP synthase B/B' CF(0)
AL552_24565	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL552_24565	PF00306	ATP synthase alpha/beta chain, C terminal domain
AL552_24565	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AL552_24570	PF00231	ATP synthase
AL552_24575	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL552_24575	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AL552_24580	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
AL552_24580	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
AL552_24585	PF00132	Bacterial transferase hexapeptide (six repeats)
AL552_24585	PF12804	MobA-like NTP transferase domain
AL552_24590	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_24595	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL552_24600	PF07690	Major Facilitator Superfamily
AL552_24605	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_24605	PF03466	LysR substrate binding domain
AL552_24610	PF00291	Pyridoxal-phosphate dependent enzyme
AL552_24610	PF00585	C-terminal regulatory domain of Threonine dehydratase
AL552_24615	PF00920	Dehydratase family
AL552_24620	PF01063	Aminotransferase class IV
AL552_24625	PF13710	ACT domain
AL552_24630	PF00205	Thiamine pyrophosphate enzyme, central domain
AL552_24630	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL552_24630	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL552_24635	PF01078	Magnesium chelatase, subunit ChlI
AL552_24635	PF13335	AL552_24635
AL552_24635	PF13541	Subunit ChlI of Mg-chelatase
AL552_24640	PF11059	AL552_24640
AL552_24645	PF01553	Acyltransferase
AL552_24650	PF01323	DSBA-like thioredoxin domain
AL552_24655	PF01636	Phosphotransferase enzyme family
AL552_24660	PF11614	IG-like fold at C-terminal of FixG, putative oxidoreductase
AL552_24660	PF12801	AL552_24660
AL552_24660	PF13746	4Fe-4S dicluster domain
AL552_24665	PF06288	Protein of unknown function (DUF1040)
AL552_24675	PF07070	AL552_24675
AL552_24680	PF03006	AL552_24680
AL552_24685	PF11355	AL552_24685
AL552_24690	PF02386	Cation transport protein
AL552_24695	PF02080	TrkA-C domain
AL552_24695	PF02254	TrkA-N domain
AL552_24700	PF01029	NusB family
AL552_24700	PF01189	NOL1/NOP2/sun family
AL552_24705	PF00551	Formyl transferase
AL552_24705	PF02911	Formyl transferase, C-terminal domain
AL552_24710	PF01327	Polypeptide deformylase
AL552_24715	PF01476	LysM domain
AL552_24720	PF02481	DNA recombination-mediator protein A
AL552_24725	PF04361	AL552_24725
AL552_24730	PF01396	AL552_24730
AL552_24735	PF02222	ATP-grasp domain
AL552_24740	PF00731	AIR carboxylase
AL552_24745	PF01300	Telomere recombination
AL552_24750	PF01218	Coproporphyrinogen III oxidase
AL552_24755	PF01488	Shikimate / quinate 5-dehydrogenase
AL552_24755	PF08501	Shikimate dehydrogenase substrate binding domain
AL552_24760	PF07369	Protein of unknown function (DUF1488)
AL552_24765	PF00132	Bacterial transferase hexapeptide (six repeats)
AL552_24805	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_24805	PF03466	LysR substrate binding domain
AL552_24810	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
AL552_24810	PF07991	Acetohydroxy acid isomeroreductase, catalytic domain
AL552_24815	PF04380	AL552_24815
AL552_24820	PF00873	AcrB/AcrD/AcrF family
AL552_24825	PF16576	AL552_24825
AL552_24830	PF00440	Bacterial regulatory proteins, tetR family
AL552_24830	PF16295	AL552_24830
AL552_24840	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
AL552_24870	PF13419	Haloacid dehalogenase-like hydrolase
AL552_24880	PF00005	ABC transporter
AL552_24880	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL552_24885	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL552_24890	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_24895	PF00528	Binding-protein-dependent transport system inner membrane component
AL552_24895	PF12911	AL552_24895
AL552_24915	PF05345	Putative Ig domain
AL552_24925	PF07638	ECF sigma factor
AL552_24935	PF00069	Protein kinase domain
AL552_24940	PF00356	Bacterial regulatory proteins, lacI family
AL552_24940	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AL552_24945	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_24945	PF03466	LysR substrate binding domain
AL552_24950	PF00893	Small Multidrug Resistance protein
AL552_24955	PF00893	Small Multidrug Resistance protein
AL552_24960	PF00920	Dehydratase family
AL552_24965	PF01202	Shikimate kinase
AL552_24970	PF02447	AL552_24970
AL552_24975	PF01081	KDPG and KHG aldolase
AL552_24980	PF01048	Phosphorylase superfamily
AL552_24985	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL552_24985	PF03466	LysR substrate binding domain
AL552_24990	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL552_24990	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL552_24995	PF04378	Ribosomal RNA small subunit methyltransferase D, RsmJ
AL552_25000	PF01432	Peptidase family M3
AL552_25005	PF01037	AsnC family
AL552_25005	PF13404	AsnC-type helix-turn-helix domain
AL552_25010	PF00563	EAL domain
AL552_25010	PF00990	GGDEF domain
AL552_25010	PF13426	PAS domain
AL552_25015	PF04445	Putative SAM-dependent methyltransferase
AL552_25025	PF00892	EamA-like transporter family
AL552_25030	PF00582	Universal stress protein family
AL552_25035	PF00210	Ferritin-like domain
AL552_25040	PF10625	AL552_25040
AL552_25045	PF03486	HI0933-like protein
AL552_25050	PF00158	Sigma-54 interaction domain
AL552_25050	PF02954	Bacterial regulatory protein, Fis family
AL552_25055	PF04972	BON domain
AL552_25060	PF07043	AL552_25060
AL552_25070	PF01814	Hemerythrin HHE cation binding domain
AL552_25075	PF00781	Diacylglycerol kinase catalytic domain
AL552_25075	PF00782	Dual specificity phosphatase, catalytic domain
AL552_25085	PF09537	Domain of unknown function (DUF2383)
AL552_25105	PF01594	AL552_25105
AL552_25110	PF00563	EAL domain
AL552_25110	PF00990	GGDEF domain
AL552_25110	PF08448	PAS fold
AL552_25110	PF13426	PAS domain
AL552_25115	PF00892	EamA-like transporter family
AL552_25120	PF02646	AL552_25120
AL552_25125	PF01209	ubiE/COQ5 methyltransferase family
AL552_25130	PF02036	SCP-2 sterol transfer family
AL552_25135	PF03109	AL552_25135
AL552_25140	PF02416	mttA/Hcf106 family
AL552_25145	PF02416	mttA/Hcf106 family
AL552_25150	PF00902	Sec-independent protein translocase protein (TatC)
AL552_25160	PF01026	TatD related DNase
AL552_25170	PF00490	Delta-aminolevulinic acid dehydratase
AL552_25175	PF00583	Acetyltransferase (GNAT) family
AL552_25185	PF00476	DNA polymerase family A
AL552_25185	PF01367	5'-3' exonuclease, C-terminal SAM fold
AL552_25185	PF01612	3'-5' exonuclease
AL552_25185	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
AL552_25195	PF01926	50S ribosome-binding GTPase
AL552_25200	PF00034	Cytochrome c
AL552_25210	PF13489	Methyltransferase domain
AL552_25215	PF04220	AL552_25215
AL552_25220	PF10675	AL552_25220
AL552_25225	PF04055	Radical SAM superfamily
AL552_25225	PF06969	HemN C-terminal domain
AL552_25230	PF00962	Adenosine/AMP deaminase
AL552_25235	PF00563	EAL domain
AL552_25235	PF00990	GGDEF domain
AL552_25235	PF02743	Cache domain
AL552_25240	PF00072	Response regulator receiver domain
AL552_25240	PF00158	Sigma-54 interaction domain
AL552_25240	PF02954	Bacterial regulatory protein, Fis family
AL552_25245	PF00512	His Kinase A (phospho-acceptor) domain
AL552_25245	PF00989	PAS fold
AL552_25245	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL552_25250	PF13511	AL552_25250
AL552_25255	PF00120	Glutamine synthetase, catalytic domain
AL552_25255	PF03951	Glutamine synthetase, beta-Grasp domain
AL552_25260	PF00009	Elongation factor Tu GTP binding domain
AL552_25260	PF00679	Elongation factor G C-terminus
AL552_25260	PF03144	Elongation factor Tu domain 2
AL552_25265	PF13521	AAA domain
AL552_25270	PF11172	AL552_25270