AL552_00060 SM00822 AL552_00060 AL552_00095 SM00422 helix_turn_helix, mercury resistance AL552_00145 SM00342 helix_turn_helix, arabinose operon control protein AL552_00170 SM00382 ATPases associated with a variety of cellular activities AL552_00180 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL552_00180 SM00091 PAS domain AL552_00180 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_00195 SM00052 Putative diguanylate phosphodiesterase AL552_00195 SM00267 diguanylate cyclase AL552_00200 SM00487 DEAD-like helicases superfamily AL552_00200 SM00490 helicase superfamily c-terminal domain AL552_00205 SM00357 Cold shock protein domain AL552_00205 SM00955 AL552_00205 AL552_00210 SM00342 helix_turn_helix, arabinose operon control protein AL552_00265 SM00530 Helix-turn-helix XRE-family like proteins AL552_00285 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_00290 SM00382 ATPases associated with a variety of cellular activities AL552_00295 SM00052 Putative diguanylate phosphodiesterase AL552_00300 SM00346 helix_turn_helix isocitrate lyase regulation AL552_00315 SM00487 DEAD-like helicases superfamily AL552_00315 SM00490 helicase superfamily c-terminal domain AL552_00320 SM00833 Cobalamin synthesis protein cobW C-terminal domain AL552_00340 SM00357 Cold shock protein domain AL552_00345 SM00316 Ribosomal protein S1-like RNA-binding domain AL552_00345 SM00357 Cold shock protein domain AL552_00345 SM00955 AL552_00345 AL552_00365 SM00487 DEAD-like helicases superfamily AL552_00365 SM00490 helicase superfamily c-terminal domain AL552_00405 SM00829 Enoylreductase AL552_00445 SM00342 helix_turn_helix, arabinose operon control protein AL552_00460 SM00382 ATPases associated with a variety of cellular activities AL552_00480 SM00862 Transcriptional regulatory protein, C terminal AL552_00615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_00615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_00625 SM00382 ATPases associated with a variety of cellular activities AL552_00645 SM00062 Bacterial periplasmic substrate-binding proteins AL552_00645 SM00267 diguanylate cyclase AL552_00655 SM00357 Cold shock protein domain AL552_00660 SM01322 AL552_00660 AL552_00750 SM00342 helix_turn_helix, arabinose operon control protein AL552_00810 SM00052 Putative diguanylate phosphodiesterase AL552_00810 SM00267 diguanylate cyclase AL552_00850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_00850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_00875 SM00530 Helix-turn-helix XRE-family like proteins AL552_00880 SM00481 DNA polymerase alpha chain like domain AL552_00920 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL552_00930 SM00342 helix_turn_helix, arabinose operon control protein AL552_00955 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_00955 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_00965 SM00382 ATPases associated with a variety of cellular activities AL552_00985 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL552_01030 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL552_01030 SM00267 diguanylate cyclase AL552_01075 SM00382 ATPases associated with a variety of cellular activities AL552_01100 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL552_01105 SM00642 Alpha-amylase domain AL552_01110 SM00422 helix_turn_helix, mercury resistance AL552_01145 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_01145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_01180 SM00260 Two component signalling adaptor domain AL552_01180 SM00448 cheY-homologous receiver domain AL552_01230 SM00382 ATPases associated with a variety of cellular activities AL552_01315 SM00342 helix_turn_helix, arabinose operon control protein AL552_01350 SM00382 ATPases associated with a variety of cellular activities AL552_01410 SM01022 AL552_01410 AL552_01420 SM00829 Enoylreductase AL552_01430 SM01060 AL552_01430 AL552_01455 SM00342 helix_turn_helix, arabinose operon control protein AL552_01480 SM00849 Metallo-beta-lactamase superfamily AL552_01500 SM00052 Putative diguanylate phosphodiesterase AL552_01550 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_01550 SM00866 AL552_01550 AL552_01575 SM00382 ATPases associated with a variety of cellular activities AL552_01610 SM00155 Phospholipase D. Active site motifs. AL552_01620 SM01022 AL552_01620 AL552_01625 SM00028 Tetratricopeptide repeats AL552_01635 SM00422 helix_turn_helix, mercury resistance AL552_01660 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AL552_01670 SM00838 Elongation factor G C-terminus AL552_01670 SM00889 Elongation factor G, domain IV AL552_01710 SM00382 ATPases associated with a variety of cellular activities AL552_01780 SM00420 helix_turn_helix, Deoxyribose operon repressor AL552_01780 SM01134 AL552_01780 AL552_01825 SM00342 helix_turn_helix, arabinose operon control protein AL552_01870 SM00883 Chaperonin 10 Kd subunit AL552_01875 SM00450 Rhodanese Homology Domain AL552_01890 SM01240 AL552_01890 AL552_01965 SM00858 AL552_01965 AL552_02040 SM00631 AL552_02040 AL552_02070 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_02070 SM00866 AL552_02070 AL552_02080 SM00382 ATPases associated with a variety of cellular activities AL552_02105 SM00354 helix_turn _helix lactose operon repressor AL552_02145 SM01057 Eukaryotic-type carbonic anhydrase AL552_02205 SM01266 AL552_02205 AL552_02240 SM00267 diguanylate cyclase AL552_02250 SM00530 Helix-turn-helix XRE-family like proteins AL552_02255 SM00267 diguanylate cyclase AL552_02255 SM01079 AL552_02255 AL552_02345 SM00267 diguanylate cyclase AL552_02355 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL552_02355 SM00387 Histidine kinase-like ATPases AL552_02380 SM00342 helix_turn_helix, arabinose operon control protein AL552_02405 SM00849 Metallo-beta-lactamase superfamily AL552_02445 SM00382 ATPases associated with a variety of cellular activities AL552_02520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_02520 SM00387 Histidine kinase-like ATPases AL552_02520 SM00388 His Kinase A (phosphoacceptor) domain AL552_02525 SM00448 cheY-homologous receiver domain AL552_02525 SM00862 Transcriptional regulatory protein, C terminal AL552_02625 SM00382 ATPases associated with a variety of cellular activities AL552_02655 SM00014 Acid phosphatase homologues AL552_02705 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_02780 SM00506 Appr-1"-p processing enzyme AL552_02835 SM00495 Chitin-binding domain type 3 AL552_02840 SM00344 helix_turn_helix ASNC type AL552_02870 SM00829 Enoylreductase AL552_02885 SM00267 diguanylate cyclase AL552_02905 SM00849 Metallo-beta-lactamase superfamily AL552_02930 SM00267 diguanylate cyclase AL552_02950 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AL552_02950 SM00495 Chitin-binding domain type 3 AL552_02950 SM00636 AL552_02950 AL552_02995 SM00342 helix_turn_helix, arabinose operon control protein AL552_02995 SM01009 AlkA N-terminal domain AL552_03045 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_03080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_03080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_03080 SM01049 AL552_03080 AL552_03095 SM00448 cheY-homologous receiver domain AL552_03095 SM00850 LytTr DNA-binding domain AL552_03100 SM00387 Histidine kinase-like ATPases AL552_03120 SM00382 ATPases associated with a variety of cellular activities AL552_03150 SM00387 Histidine kinase-like ATPases AL552_03150 SM00388 His Kinase A (phosphoacceptor) domain AL552_03150 SM00448 cheY-homologous receiver domain AL552_03170 SM00382 ATPases associated with a variety of cellular activities AL552_03175 SM00382 ATPases associated with a variety of cellular activities AL552_03195 SM00470 ParB-like nuclease domain AL552_03275 SM00382 ATPases associated with a variety of cellular activities AL552_03280 SM00052 Putative diguanylate phosphodiesterase AL552_03280 SM00267 diguanylate cyclase AL552_03295 SM00448 cheY-homologous receiver domain AL552_03300 SM00387 Histidine kinase-like ATPases AL552_03310 SM00421 helix_turn_helix, Lux Regulon AL552_03315 SM00342 helix_turn_helix, arabinose operon control protein AL552_03340 SM00360 RNA recognition motif AL552_03355 SM00344 helix_turn_helix ASNC type AL552_03365 SM00382 ATPases associated with a variety of cellular activities AL552_03375 SM00342 helix_turn_helix, arabinose operon control protein AL552_03405 SM00342 helix_turn_helix, arabinose operon control protein AL552_03410 SM00829 Enoylreductase AL552_03465 SM00347 helix_turn_helix multiple antibiotic resistance protein AL552_03475 SM00342 helix_turn_helix, arabinose operon control protein AL552_03475 SM00871 Bacterial transcription activator, effector binding domain AL552_03490 SM00382 ATPases associated with a variety of cellular activities AL552_03545 SM00448 cheY-homologous receiver domain AL552_03545 SM00862 Transcriptional regulatory protein, C terminal AL552_03550 SM00387 Histidine kinase-like ATPases AL552_03610 SM00382 ATPases associated with a variety of cellular activities AL552_03660 SM00857 Resolvase, N terminal domain AL552_03665 SM00354 helix_turn _helix lactose operon repressor AL552_03715 SM00642 Alpha-amylase domain AL552_03725 SM00642 Alpha-amylase domain AL552_03730 SM00671 Sel1-like repeats. AL552_03750 SM00966 SpoVT / AbrB like domain AL552_03790 SM00421 helix_turn_helix, Lux Regulon AL552_03810 SM00642 Alpha-amylase domain AL552_03820 SM00642 Alpha-amylase domain AL552_03870 SM00226 Low molecular weight phosphatase family AL552_03905 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AL552_03920 SM00450 Rhodanese Homology Domain AL552_03935 SM00936 Penicillin-binding protein 5, C-terminal domain AL552_03940 SM00642 Alpha-amylase domain AL552_03945 SM00342 helix_turn_helix, arabinose operon control protein AL552_04080 SM00422 helix_turn_helix, mercury resistance AL552_04210 SM00382 ATPases associated with a variety of cellular activities AL552_04245 SM00020 Trypsin-like serine protease AL552_04265 SM00481 DNA polymerase alpha chain like domain AL552_04305 SM00448 cheY-homologous receiver domain AL552_04305 SM00862 Transcriptional regulatory protein, C terminal AL552_04310 SM00388 His Kinase A (phosphoacceptor) domain AL552_04325 SM00062 Bacterial periplasmic substrate-binding proteins AL552_04330 SM00052 Putative diguanylate phosphodiesterase AL552_04330 SM00267 diguanylate cyclase AL552_04340 SM00829 Enoylreductase AL552_04345 SM01057 Eukaryotic-type carbonic anhydrase AL552_04380 SM00382 ATPases associated with a variety of cellular activities AL552_04415 SM00587 ZnF_C4 abd HLH domain containing kinases domain AL552_04450 SM00382 ATPases associated with a variety of cellular activities AL552_04470 SM00267 diguanylate cyclase AL552_04475 SM00028 Tetratricopeptide repeats AL552_04500 SM00422 helix_turn_helix, mercury resistance AL552_04510 SM00257 Lysin motif AL552_04520 SM00487 DEAD-like helicases superfamily AL552_04520 SM00490 helicase superfamily c-terminal domain AL552_04550 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_04550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_04570 SM00382 ATPases associated with a variety of cellular activities AL552_04575 SM00267 diguanylate cyclase AL552_04585 SM00028 Tetratricopeptide repeats AL552_04585 SM00327 von Willebrand factor (vWF) type A domain AL552_04590 SM00327 von Willebrand factor (vWF) type A domain AL552_04615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_04615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_04630 SM00421 helix_turn_helix, Lux Regulon AL552_04640 SM00382 ATPases associated with a variety of cellular activities AL552_04665 SM00382 ATPases associated with a variety of cellular activities AL552_04675 SM00382 ATPases associated with a variety of cellular activities AL552_04720 SM00421 helix_turn_helix, Lux Regulon AL552_04740 SM00870 AL552_04740 AL552_04745 SM00788 Adenylosuccinate synthetase AL552_04795 SM00344 helix_turn_helix ASNC type AL552_04820 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_04835 SM00342 helix_turn_helix, arabinose operon control protein AL552_04850 SM00829 Enoylreductase AL552_04880 SM00487 DEAD-like helicases superfamily AL552_04880 SM00490 helicase superfamily c-terminal domain AL552_04925 SM00342 helix_turn_helix, arabinose operon control protein AL552_04925 SM00871 Bacterial transcription activator, effector binding domain AL552_04960 SM00822 AL552_04960 AL552_04980 SM00354 helix_turn _helix lactose operon repressor AL552_04995 SM00640 Glycosyl hydrolases family 32 AL552_05015 SM00936 Penicillin-binding protein 5, C-terminal domain AL552_05045 SM00357 Cold shock protein domain AL552_05090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_05090 SM00387 Histidine kinase-like ATPases AL552_05090 SM00388 His Kinase A (phosphoacceptor) domain AL552_05095 SM00448 cheY-homologous receiver domain AL552_05095 SM00862 Transcriptional regulatory protein, C terminal AL552_05100 SM01065 Starch binding domain AL552_05140 SM00563 Phosphate acyltransferases AL552_05150 SM00530 Helix-turn-helix XRE-family like proteins AL552_05155 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL552_05170 SM00924 MgtE intracellular N domain AL552_05190 SM00342 helix_turn_helix, arabinose operon control protein AL552_05205 SM00448 cheY-homologous receiver domain AL552_05205 SM00862 Transcriptional regulatory protein, C terminal AL552_05210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_05210 SM00387 Histidine kinase-like ATPases AL552_05210 SM00388 His Kinase A (phosphoacceptor) domain AL552_05220 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_05235 SM00344 helix_turn_helix ASNC type AL552_05260 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL552_05265 SM00387 Histidine kinase-like ATPases AL552_05265 SM00388 His Kinase A (phosphoacceptor) domain AL552_05265 SM00448 cheY-homologous receiver domain AL552_05290 SM00465 GIY-YIG type nucleases (URI domain) AL552_05305 SM00387 Histidine kinase-like ATPases AL552_05305 SM00388 His Kinase A (phosphoacceptor) domain AL552_05305 SM00448 cheY-homologous receiver domain AL552_05310 SM00347 helix_turn_helix multiple antibiotic resistance protein AL552_05335 SM00344 helix_turn_helix ASNC type AL552_05390 SM00822 AL552_05390 AL552_05425 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL552_05440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_05440 SM00387 Histidine kinase-like ATPases AL552_05445 SM00421 helix_turn_helix, Lux Regulon AL552_05445 SM00448 cheY-homologous receiver domain AL552_05480 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_05515 SM00091 PAS domain AL552_05515 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_05520 SM00861 Transketolase, pyrimidine binding domain AL552_05545 SM00636 AL552_05545 AL552_05550 SM00052 Putative diguanylate phosphodiesterase AL552_05550 SM00267 diguanylate cyclase AL552_05555 SM00450 Rhodanese Homology Domain AL552_05580 SM00852 Probable molybdopterin binding domain AL552_05620 SM00448 cheY-homologous receiver domain AL552_05635 SM01240 AL552_05635 AL552_05660 SM00028 Tetratricopeptide repeats AL552_05660 SM00530 Helix-turn-helix XRE-family like proteins AL552_05685 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_05735 SM00342 helix_turn_helix, arabinose operon control protein AL552_05790 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_05790 SM00866 AL552_05790 AL552_05810 SM00893 Electron transfer flavoprotein domain AL552_05815 SM00893 Electron transfer flavoprotein domain AL552_05830 SM00382 ATPases associated with a variety of cellular activities AL552_05855 SM00382 ATPases associated with a variety of cellular activities AL552_05940 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_05945 SM01266 AL552_05945 AL552_05960 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL552_05960 SM00091 PAS domain AL552_05960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_05960 SM00387 Histidine kinase-like ATPases AL552_05960 SM00388 His Kinase A (phosphoacceptor) domain AL552_05960 SM00448 cheY-homologous receiver domain AL552_05970 SM00878 Biotin carboxylase C-terminal domain AL552_05990 SM00422 helix_turn_helix, mercury resistance AL552_06025 SM00822 AL552_06025 AL552_06060 SM00382 ATPases associated with a variety of cellular activities AL552_06075 SM00244 prohibitin homologues AL552_06085 SM00052 Putative diguanylate phosphodiesterase AL552_06085 SM00091 PAS domain AL552_06085 SM00267 diguanylate cyclase AL552_06170 SM00382 ATPases associated with a variety of cellular activities AL552_06190 SM00354 helix_turn _helix lactose operon repressor AL552_06230 SM00382 ATPases associated with a variety of cellular activities AL552_06235 SM00422 helix_turn_helix, mercury resistance AL552_06240 SM00342 helix_turn_helix, arabinose operon control protein AL552_06285 SM00851 MGS-like domain AL552_06310 SM00862 Transcriptional regulatory protein, C terminal AL552_06350 SM00327 von Willebrand factor (vWF) type A domain AL552_06355 SM00327 von Willebrand factor (vWF) type A domain AL552_06375 SM00046 Diacylglycerol kinase catalytic domain (presumed) AL552_06390 SM00990 AL552_06390 AL552_06435 SM00387 Histidine kinase-like ATPases AL552_06435 SM00448 cheY-homologous receiver domain AL552_06450 SM00052 Putative diguanylate phosphodiesterase AL552_06450 SM00448 cheY-homologous receiver domain AL552_06455 SM00267 diguanylate cyclase AL552_06465 SM00421 helix_turn_helix, Lux Regulon AL552_06465 SM00448 cheY-homologous receiver domain AL552_06470 SM00260 Two component signalling adaptor domain AL552_06470 SM00448 cheY-homologous receiver domain AL552_06545 SM00704 CDGSH-type zinc finger. Function unknown. AL552_06560 SM00953 AL552_06560 AL552_06605 SM00924 MgtE intracellular N domain AL552_06640 SM00422 helix_turn_helix, mercury resistance AL552_06670 SM00382 ATPases associated with a variety of cellular activities AL552_06675 SM00479 AL552_06675 AL552_06730 SM00530 Helix-turn-helix XRE-family like proteins AL552_06780 SM00354 helix_turn _helix lactose operon repressor AL552_06795 SM00052 Putative diguanylate phosphodiesterase AL552_06805 SM00062 Bacterial periplasmic substrate-binding proteins AL552_06805 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL552_06815 SM00382 ATPases associated with a variety of cellular activities AL552_06835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_06835 SM00387 Histidine kinase-like ATPases AL552_06835 SM00388 His Kinase A (phosphoacceptor) domain AL552_06840 SM00448 cheY-homologous receiver domain AL552_06860 SM00495 Chitin-binding domain type 3 AL552_06860 SM00636 AL552_06860 AL552_06900 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_06915 SM00487 DEAD-like helicases superfamily AL552_06915 SM00490 helicase superfamily c-terminal domain AL552_06920 SM00052 Putative diguanylate phosphodiesterase AL552_06940 SM00867 YceI-like domain AL552_06945 SM00116 Domain in cystathionine beta-synthase and other proteins. AL552_06985 SM00782 PhnA Zinc-Ribbon AL552_07050 SM00271 DnaJ molecular chaperone homology domain AL552_07060 SM00052 Putative diguanylate phosphodiesterase AL552_07060 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL552_07060 SM00267 diguanylate cyclase AL552_07075 SM00382 ATPases associated with a variety of cellular activities AL552_07090 SM00797 Allophanate hydrolase subunit 2 AL552_07095 SM00796 Allophanate hydrolase subunit 1 AL552_07105 SM00091 PAS domain AL552_07105 SM00267 diguanylate cyclase AL552_07105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_07130 SM00881 CoA binding domain AL552_07260 SM00448 cheY-homologous receiver domain AL552_07260 SM00862 Transcriptional regulatory protein, C terminal AL552_07265 SM00387 Histidine kinase-like ATPases AL552_07265 SM00388 His Kinase A (phosphoacceptor) domain AL552_07275 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AL552_07275 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AL552_07290 SM00267 diguanylate cyclase AL552_07300 SM00267 diguanylate cyclase AL552_07300 SM00448 cheY-homologous receiver domain AL552_07310 SM00382 ATPases associated with a variety of cellular activities AL552_07350 SM00342 helix_turn_helix, arabinose operon control protein AL552_07395 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL552_07405 SM00450 Rhodanese Homology Domain AL552_07450 SM00421 helix_turn_helix, Lux Regulon AL552_07450 SM00448 cheY-homologous receiver domain AL552_07455 SM00387 Histidine kinase-like ATPases AL552_07575 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL552_07575 SM00267 diguanylate cyclase AL552_07615 SM00880 AL552_07615 AL552_07630 SM00642 Alpha-amylase domain AL552_07645 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_07645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_07650 SM01005 Alanine racemase, C-terminal domain AL552_07670 SM01119 AL552_07670 AL552_07710 SM00382 ATPases associated with a variety of cellular activities AL552_07780 SM00382 ATPases associated with a variety of cellular activities AL552_07780 SM01086 C-terminal, D2-small domain, of ClpB protein AL552_07825 SM00331 Sigma factor PP2C-like phosphatases AL552_07825 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AL552_07855 SM00240 Forkhead associated domain AL552_07865 SM00220 Serine/Threonine protein kinases, catalytic domain AL552_07885 SM00331 Sigma factor PP2C-like phosphatases AL552_07885 SM00448 cheY-homologous receiver domain AL552_07920 SM00382 ATPases associated with a variety of cellular activities AL552_07940 SM01012 AL552_07940 AL552_08000 SM00871 Bacterial transcription activator, effector binding domain AL552_08005 SM00388 His Kinase A (phosphoacceptor) domain AL552_08010 SM00448 cheY-homologous receiver domain AL552_08010 SM00862 Transcriptional regulatory protein, C terminal AL552_08070 SM00861 Transketolase, pyrimidine binding domain AL552_08090 SM00112 Cadherin repeats. AL552_08090 SM00327 von Willebrand factor (vWF) type A domain AL552_08135 SM00062 Bacterial periplasmic substrate-binding proteins AL552_08135 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL552_08140 SM00382 ATPases associated with a variety of cellular activities AL552_08240 SM00470 ParB-like nuclease domain AL552_08260 SM00487 DEAD-like helicases superfamily AL552_08305 SM00530 Helix-turn-helix XRE-family like proteins AL552_08325 SM00990 AL552_08325 AL552_08340 SM00411 bacterial (prokaryotic) histone like domain AL552_08345 SM00411 bacterial (prokaryotic) histone like domain AL552_08370 SM00966 SpoVT / AbrB like domain AL552_08435 SM00357 Cold shock protein domain AL552_08510 SM00267 diguanylate cyclase AL552_08545 SM01321 AL552_08545 AL552_08555 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL552_08575 SM00357 Cold shock protein domain AL552_08590 SM00244 prohibitin homologues AL552_08605 SM00357 Cold shock protein domain AL552_08785 SM00646 AL552_08785 AL552_08930 SM00363 S4 RNA-binding domain AL552_08945 SM00382 ATPases associated with a variety of cellular activities AL552_09025 SM00316 Ribosomal protein S1-like RNA-binding domain AL552_09025 SM00732 Likely ribonuclease with RNase H fold. AL552_09045 SM00448 cheY-homologous receiver domain AL552_09045 SM00862 Transcriptional regulatory protein, C terminal AL552_09050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_09050 SM00387 Histidine kinase-like ATPases AL552_09050 SM00388 His Kinase A (phosphoacceptor) domain AL552_09060 SM00487 DEAD-like helicases superfamily AL552_09060 SM00490 helicase superfamily c-terminal domain AL552_09070 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL552_09070 SM00954 Region found in RelA / SpoT proteins AL552_09075 SM01409 AL552_09075 AL552_09080 SM00072 Guanylate kinase homologues. AL552_09085 SM00028 Tetratricopeptide repeats AL552_09140 SM00382 ATPases associated with a variety of cellular activities AL552_09145 SM00382 ATPases associated with a variety of cellular activities AL552_09160 SM00342 helix_turn_helix, arabinose operon control protein AL552_09275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_09275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_09275 SM01049 AL552_09275 AL552_09300 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AL552_09300 SM01232 AL552_09300 AL552_09305 SM00672 Putative lipopolysaccharide-modifying enzyme. AL552_09445 SM00382 ATPases associated with a variety of cellular activities AL552_09600 SM00984 UDP binding domain AL552_09665 SM00382 ATPases associated with a variety of cellular activities AL552_09665 SM01086 C-terminal, D2-small domain, of ClpB protein AL552_09680 SM00354 helix_turn _helix lactose operon repressor AL552_09685 SM00487 DEAD-like helicases superfamily AL552_09685 SM00490 helicase superfamily c-terminal domain AL552_09700 SM01403 AL552_09700 AL552_09720 SM01382 AL552_09720 AL552_09720 SM01383 AL552_09720 AL552_09735 SM00322 K homology RNA-binding domain AL552_09755 SM01374 AL552_09755 AL552_09760 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AL552_09825 SM00363 S4 RNA-binding domain AL552_09825 SM01390 AL552_09825 AL552_09830 SM00662 RNA polymerases D AL552_09860 SM00487 DEAD-like helicases superfamily AL552_09860 SM00490 helicase superfamily c-terminal domain AL552_09915 SM00382 ATPases associated with a variety of cellular activities AL552_10000 SM00382 ATPases associated with a variety of cellular activities AL552_10095 SM00650 Ribosomal RNA adenine dimethylases AL552_10115 SM00271 DnaJ molecular chaperone homology domain AL552_10135 SM01329 AL552_10135 AL552_10140 SM00917 LeuA allosteric (dimerisation) domain AL552_10155 SM00014 Acid phosphatase homologues AL552_10185 SM00267 diguanylate cyclase AL552_10190 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_10205 SM00420 helix_turn_helix, Deoxyribose operon repressor AL552_10205 SM01134 AL552_10205 AL552_10220 SM00448 cheY-homologous receiver domain AL552_10220 SM00862 Transcriptional regulatory protein, C terminal AL552_10225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_10225 SM00387 Histidine kinase-like ATPases AL552_10225 SM00388 His Kinase A (phosphoacceptor) domain AL552_10240 SM01120 AL552_10240 AL552_10275 SM00563 Phosphate acyltransferases AL552_10315 SM00400 zinc finger AL552_10315 SM00493 AL552_10315 AL552_10315 SM00766 DNA primase DnaG DnaB-binding AL552_10340 SM01207 AL552_10340 AL552_10345 SM00905 Dihydroneopterin aldolase AL552_10365 SM00382 ATPases associated with a variety of cellular activities AL552_10380 SM00287 Bacterial SH3 domain homologues AL552_10395 SM00880 AL552_10395 AL552_10395 SM01118 AL552_10395 AL552_10405 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_10445 SM00387 Histidine kinase-like ATPases AL552_10445 SM00433 TopoisomeraseII AL552_10450 SM00434 DNA Topoisomerase IV AL552_10455 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL552_10460 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL552_10520 SM00749 bacterial OsmY and nodulation domain AL552_10610 SM00842 Cell division protein FtsA AL552_10615 SM00864 Tubulin/FtsZ family, GTPase domain AL552_10615 SM00865 Tubulin/FtsZ family, C-terminal domain AL552_10630 SM00957 SecA DEAD-like domain AL552_10630 SM00958 SecA preprotein cross-linking domain AL552_10645 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AL552_10650 SM00851 MGS-like domain AL552_10650 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AL552_10735 SM00729 Elongator protein 3, MiaB family, Radical SAM AL552_10740 SM00091 PAS domain AL552_10740 SM00267 diguanylate cyclase AL552_10745 SM00073 Histidine Phosphotransfer domain AL552_10745 SM00091 PAS domain AL552_10745 SM00387 Histidine kinase-like ATPases AL552_10745 SM00388 His Kinase A (phosphoacceptor) domain AL552_10745 SM00448 cheY-homologous receiver domain AL552_10755 SM00448 cheY-homologous receiver domain AL552_10755 SM00862 Transcriptional regulatory protein, C terminal AL552_10810 SM00518 AP endonuclease family 2 AL552_10820 SM00986 Uracil DNA glycosylase superfamily AL552_10820 SM00987 UreE urease accessory protein, C-terminal domain AL552_10845 SM00487 DEAD-like helicases superfamily AL552_10845 SM00490 helicase superfamily c-terminal domain AL552_10890 SM00382 ATPases associated with a variety of cellular activities AL552_10910 SM00927 DNA mismatch repair enzyme MutH AL552_10925 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL552_10945 SM01154 AL552_10945 AL552_10960 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL552_10975 SM00904 Riboflavin kinase AL552_11000 SM00226 Low molecular weight phosphatase family AL552_11005 SM00448 cheY-homologous receiver domain AL552_11005 SM00850 LytTr DNA-binding domain AL552_11050 SM00830 Chorismate mutase type II AL552_11065 SM00382 ATPases associated with a variety of cellular activities AL552_11085 SM00830 Chorismate mutase type II AL552_11095 SM00062 Bacterial periplasmic substrate-binding proteins AL552_11105 SM00363 S4 RNA-binding domain AL552_11115 SM00382 ATPases associated with a variety of cellular activities AL552_11115 SM01086 C-terminal, D2-small domain, of ClpB protein AL552_11195 SM00448 cheY-homologous receiver domain AL552_11195 SM00862 Transcriptional regulatory protein, C terminal AL552_11200 SM00091 PAS domain AL552_11200 SM00387 Histidine kinase-like ATPases AL552_11200 SM00388 His Kinase A (phosphoacceptor) domain AL552_11230 SM00382 ATPases associated with a variety of cellular activities AL552_11275 SM00116 Domain in cystathionine beta-synthase and other proteins. AL552_11285 SM00020 Trypsin-like serine protease AL552_11300 SM01323 AL552_11300 AL552_11345 SM00271 DnaJ molecular chaperone homology domain AL552_11370 SM00562 AL552_11370 AL552_11385 SM00530 Helix-turn-helix XRE-family like proteins AL552_11405 SM00564 beta-propeller repeat AL552_11410 SM00382 ATPases associated with a variety of cellular activities AL552_11430 SM00116 Domain in cystathionine beta-synthase and other proteins. AL552_11430 SM01240 AL552_11430 AL552_11445 SM00495 Chitin-binding domain type 3 AL552_11580 SM00271 DnaJ molecular chaperone homology domain AL552_11625 SM00062 Bacterial periplasmic substrate-binding proteins AL552_11630 SM01211 AL552_11630 AL552_11685 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AL552_11735 SM00861 Transketolase, pyrimidine binding domain AL552_11760 SM00981 AL552_11760 AL552_11785 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AL552_11785 SM00475 5'-3' exonuclease AL552_11795 SM00267 diguanylate cyclase AL552_11800 SM00028 Tetratricopeptide repeats AL552_11830 SM00382 ATPases associated with a variety of cellular activities AL552_11830 SM00930 AL552_11830 AL552_11840 SM00354 helix_turn _helix lactose operon repressor AL552_11850 SM00642 Alpha-amylase domain AL552_11860 SM00862 Transcriptional regulatory protein, C terminal AL552_11880 SM00729 Elongator protein 3, MiaB family, Radical SAM AL552_11895 SM00936 Penicillin-binding protein 5, C-terminal domain AL552_11950 SM00116 Domain in cystathionine beta-synthase and other proteins. AL552_11950 SM01091 Transporter associated domain AL552_11965 SM00729 Elongator protein 3, MiaB family, Radical SAM AL552_12095 SM01400 AL552_12095 AL552_12115 SM00937 AL552_12115 AL552_12150 SM00363 S4 RNA-binding domain AL552_12155 SM00463 Small MutS-related domain AL552_12180 SM01081 Putative carbohydrate binding domain AL552_12265 SM00858 AL552_12265 AL552_12270 SM00260 Two component signalling adaptor domain AL552_12270 SM00448 cheY-homologous receiver domain AL552_12275 SM00138 Methyltransferase, chemotaxis proteins AL552_12320 SM00047 Lysozyme subfamily 2 AL552_12390 SM00771 ZipA, C-terminal domain (FtsZ-binding) AL552_12420 SM00244 prohibitin homologues AL552_12455 SM00938 Nitrogen regulatory protein P-II AL552_12460 SM00116 Domain in cystathionine beta-synthase and other proteins. AL552_12490 SM00862 Transcriptional regulatory protein, C terminal AL552_12495 SM00387 Histidine kinase-like ATPases AL552_12515 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AL552_12625 SM00861 Transketolase, pyrimidine binding domain AL552_12640 SM00881 CoA binding domain AL552_12660 SM00342 helix_turn_helix, arabinose operon control protein AL552_12670 SM00899 AL552_12670 AL552_12690 SM00836 DALR anticodon binding domain AL552_12690 SM01016 Arginyl tRNA synthetase N terminal dom AL552_12740 SM00474 3'-5' exonuclease AL552_12795 SM00825 Beta-ketoacyl synthase AL552_12800 SM00822 AL552_12800 AL552_12810 SM00825 Beta-ketoacyl synthase AL552_12870 SM00563 Phosphate acyltransferases AL552_12900 SM01091 Transporter associated domain AL552_12905 SM00487 DEAD-like helicases superfamily AL552_12905 SM00490 helicase superfamily c-terminal domain AL552_12920 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AL552_12955 SM00382 ATPases associated with a variety of cellular activities AL552_12955 SM00448 cheY-homologous receiver domain AL552_12960 SM00387 Histidine kinase-like ATPases AL552_12960 SM00388 His Kinase A (phosphoacceptor) domain AL552_12980 SM00382 ATPases associated with a variety of cellular activities AL552_12980 SM00994 ClpX C4-type zinc finger AL552_12980 SM01086 C-terminal, D2-small domain, of ClpB protein AL552_12985 SM00382 ATPases associated with a variety of cellular activities AL552_12985 SM00464 Found in ATP-dependent protease La (LON) AL552_12990 SM00411 bacterial (prokaryotic) histone like domain AL552_13000 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL552_13010 SM01144 AL552_13010 AL552_13015 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL552_13020 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL552_13050 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AL552_13070 SM00563 Phosphate acyltransferases AL552_13080 SM00978 AL552_13080 AL552_13150 SM00344 helix_turn_helix ASNC type AL552_13180 SM00062 Bacterial periplasmic substrate-binding proteins AL552_13180 SM00267 diguanylate cyclase AL552_13195 SM00116 Domain in cystathionine beta-synthase and other proteins. AL552_13215 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_13215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_13270 SM00487 DEAD-like helicases superfamily AL552_13270 SM00490 helicase superfamily c-terminal domain AL552_13270 SM00982 AL552_13270 AL552_13270 SM01058 CarD-like/TRCF domain AL552_13285 SM00382 ATPases associated with a variety of cellular activities AL552_13300 SM00849 Metallo-beta-lactamase superfamily AL552_13305 SM00382 ATPases associated with a variety of cellular activities AL552_13335 SM00763 PrkA AAA domain AL552_13385 SM00382 ATPases associated with a variety of cellular activities AL552_13390 SM00062 Bacterial periplasmic substrate-binding proteins AL552_13390 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL552_13405 SM01276 AL552_13405 AL552_13455 SM00357 Cold shock protein domain AL552_13465 SM00382 ATPases associated with a variety of cellular activities AL552_13465 SM01086 C-terminal, D2-small domain, of ClpB protein AL552_13470 SM00316 Ribosomal protein S1-like RNA-binding domain AL552_13500 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AL552_13500 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AL552_13500 SM00493 AL552_13500 AL552_13535 SM00354 helix_turn _helix lactose operon repressor AL552_13545 SM00448 cheY-homologous receiver domain AL552_13545 SM00862 Transcriptional regulatory protein, C terminal AL552_13630 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL552_13635 SM00382 ATPases associated with a variety of cellular activities AL552_13690 SM00028 Tetratricopeptide repeats AL552_13725 SM00387 Histidine kinase-like ATPases AL552_13725 SM00388 His Kinase A (phosphoacceptor) domain AL552_13725 SM00448 cheY-homologous receiver domain AL552_13740 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_13740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_13785 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_13810 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AL552_13810 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AL552_13815 SM00344 helix_turn_helix ASNC type AL552_13820 SM00843 AL552_13820 AL552_13830 SM00382 ATPases associated with a variety of cellular activities AL552_13855 SM00729 Elongator protein 3, MiaB family, Radical SAM AL552_13855 SM00876 Biotin and Thiamin Synthesis associated domain AL552_13950 SM00528 Domain in histone-like proteins of HNS family AL552_13960 SM00382 ATPases associated with a variety of cellular activities AL552_14010 SM00052 Putative diguanylate phosphodiesterase AL552_14025 SM00840 AL552_14025 AL552_14100 SM01131 AL552_14100 AL552_14110 SM00382 ATPases associated with a variety of cellular activities AL552_14115 SM00382 ATPases associated with a variety of cellular activities AL552_14135 SM00382 ATPases associated with a variety of cellular activities AL552_14190 SM00155 Phospholipase D. Active site motifs. AL552_14220 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL552_14220 SM00382 ATPases associated with a variety of cellular activities AL552_14240 SM00382 ATPases associated with a variety of cellular activities AL552_14290 SM00387 Histidine kinase-like ATPases AL552_14295 SM00448 cheY-homologous receiver domain AL552_14295 SM00862 Transcriptional regulatory protein, C terminal AL552_14305 SM00487 DEAD-like helicases superfamily AL552_14305 SM00490 helicase superfamily c-terminal domain AL552_14310 SM00363 S4 RNA-binding domain AL552_14365 SM00382 ATPases associated with a variety of cellular activities AL552_14465 SM00448 cheY-homologous receiver domain AL552_14470 SM00387 Histidine kinase-like ATPases AL552_14490 SM00382 ATPases associated with a variety of cellular activities AL552_14495 SM00382 ATPases associated with a variety of cellular activities AL552_14535 SM00919 Malic enzyme, NAD binding domain AL552_14535 SM01274 AL552_14535 AL552_14625 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_14625 SM00866 AL552_14625 AL552_14640 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AL552_14665 SM00530 Helix-turn-helix XRE-family like proteins AL552_14695 SM00873 B3/4 domain AL552_14695 SM00874 tRNA synthetase B5 domain AL552_14695 SM00896 Ferredoxin-fold anticodon binding domain AL552_14705 SM00411 bacterial (prokaryotic) histone like domain AL552_14740 SM00479 AL552_14740 AL552_14790 SM00382 ATPases associated with a variety of cellular activities AL552_14835 SM00245 tail specific protease AL552_14845 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_14845 SM00895 AL552_14845 AL552_14875 SM01130 AL552_14875 AL552_14880 SM00382 ATPases associated with a variety of cellular activities AL552_14900 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AL552_14910 SM00382 ATPases associated with a variety of cellular activities AL552_14915 SM00382 ATPases associated with a variety of cellular activities AL552_14990 SM00052 Putative diguanylate phosphodiesterase AL552_15000 SM00347 helix_turn_helix multiple antibiotic resistance protein AL552_15020 SM01266 AL552_15020 AL552_15035 SM00387 Histidine kinase-like ATPases AL552_15035 SM00388 His Kinase A (phosphoacceptor) domain AL552_15035 SM00448 cheY-homologous receiver domain AL552_15040 SM00052 Putative diguanylate phosphodiesterase AL552_15040 SM00267 diguanylate cyclase AL552_15050 SM00028 Tetratricopeptide repeats AL552_15130 SM00387 Histidine kinase-like ATPases AL552_15130 SM00388 His Kinase A (phosphoacceptor) domain AL552_15135 SM00448 cheY-homologous receiver domain AL552_15135 SM00862 Transcriptional regulatory protein, C terminal AL552_15145 SM00822 AL552_15145 AL552_15150 SM01236 AL552_15150 AL552_15175 SM00382 ATPases associated with a variety of cellular activities AL552_15180 SM00100 Cyclic nucleotide-monophosphate binding domain AL552_15180 SM00116 Domain in cystathionine beta-synthase and other proteins. AL552_15185 SM00479 AL552_15185 AL552_15245 SM00091 PAS domain AL552_15245 SM00387 Histidine kinase-like ATPases AL552_15250 SM00448 cheY-homologous receiver domain AL552_15260 SM00342 helix_turn_helix, arabinose operon control protein AL552_15260 SM00871 Bacterial transcription activator, effector binding domain AL552_15275 SM01350 AL552_15275 AL552_15300 SM00382 ATPases associated with a variety of cellular activities AL552_15325 SM00342 helix_turn_helix, arabinose operon control protein AL552_15430 SM00347 helix_turn_helix multiple antibiotic resistance protein AL552_15485 SM00382 ATPases associated with a variety of cellular activities AL552_15590 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_15590 SM00895 AL552_15590 AL552_15625 SM00020 Trypsin-like serine protease AL552_15625 SM00495 Chitin-binding domain type 3 AL552_15650 SM00028 Tetratricopeptide repeats AL552_15650 SM00267 diguanylate cyclase AL552_15700 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AL552_15705 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_15735 SM00382 ATPases associated with a variety of cellular activities AL552_15750 SM00062 Bacterial periplasmic substrate-binding proteins AL552_15785 SM00316 Ribosomal protein S1-like RNA-binding domain AL552_15805 SM00382 ATPases associated with a variety of cellular activities AL552_15815 SM00945 ProQ/FINO family AL552_15820 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL552_15820 SM00245 tail specific protease AL552_15855 SM00981 AL552_15855 AL552_15865 SM00382 ATPases associated with a variety of cellular activities AL552_15910 SM00387 Histidine kinase-like ATPases AL552_15910 SM00388 His Kinase A (phosphoacceptor) domain AL552_15910 SM00448 cheY-homologous receiver domain AL552_15915 SM00897 FIST N domain AL552_15915 SM01204 AL552_15915 AL552_15965 SM00100 Cyclic nucleotide-monophosphate binding domain AL552_15965 SM00419 helix_turn_helix, cAMP Regulatory protein AL552_15995 SM00382 ATPases associated with a variety of cellular activities AL552_16030 SM00248 ankyrin repeats AL552_16045 SM00860 SMI1 / KNR4 family AL552_16190 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL552_16225 SM00382 ATPases associated with a variety of cellular activities AL552_16235 SM00387 Histidine kinase-like ATPases AL552_16235 SM00388 His Kinase A (phosphoacceptor) domain AL552_16240 SM00382 ATPases associated with a variety of cellular activities AL552_16240 SM00448 cheY-homologous receiver domain AL552_16255 SM00382 ATPases associated with a variety of cellular activities AL552_16265 SM00852 Probable molybdopterin binding domain AL552_16280 SM01144 AL552_16280 AL552_16310 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_16325 SM00267 diguanylate cyclase AL552_16330 SM00448 cheY-homologous receiver domain AL552_16465 SM00382 ATPases associated with a variety of cellular activities AL552_16465 SM00487 DEAD-like helicases superfamily AL552_16465 SM00490 helicase superfamily c-terminal domain AL552_16465 SM00847 Helicase associated domain (HA2) Add an annotation AL552_16500 SM00479 AL552_16500 AL552_16505 SM00267 diguanylate cyclase AL552_16505 SM01079 AL552_16505 AL552_16545 SM00382 ATPases associated with a variety of cellular activities AL552_16550 SM00382 ATPases associated with a variety of cellular activities AL552_16575 SM00382 ATPases associated with a variety of cellular activities AL552_16600 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL552_16605 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AL552_16635 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL552_16645 SM00448 cheY-homologous receiver domain AL552_16650 SM00100 Cyclic nucleotide-monophosphate binding domain AL552_16650 SM00387 Histidine kinase-like ATPases AL552_16675 SM00267 diguanylate cyclase AL552_16690 SM00420 helix_turn_helix, Deoxyribose operon repressor AL552_16690 SM01134 AL552_16690 AL552_17095 SM00901 AL552_17095 AL552_17580 SM00255 Toll - interleukin 1 - resistance AL552_17690 SM00901 AL552_17690 AL552_18055 SM00091 PAS domain AL552_18055 SM00382 ATPases associated with a variety of cellular activities AL552_18090 SM00387 Histidine kinase-like ATPases AL552_18090 SM00388 His Kinase A (phosphoacceptor) domain AL552_18090 SM00448 cheY-homologous receiver domain AL552_18115 SM00052 Putative diguanylate phosphodiesterase AL552_18130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_18130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_18145 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_18170 SM00100 Cyclic nucleotide-monophosphate binding domain AL552_18170 SM00116 Domain in cystathionine beta-synthase and other proteins. AL552_18175 SM00479 AL552_18175 AL552_18180 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_18180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_18190 SM00347 helix_turn_helix multiple antibiotic resistance protein AL552_18195 SM00421 helix_turn_helix, Lux Regulon AL552_18195 SM00448 cheY-homologous receiver domain AL552_18200 SM00387 Histidine kinase-like ATPases AL552_18200 SM01049 AL552_18200 AL552_18230 SM00849 Metallo-beta-lactamase superfamily AL552_18320 SM00434 DNA Topoisomerase IV AL552_18345 SM00852 Probable molybdopterin binding domain AL552_18400 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL552_18400 SM00465 GIY-YIG type nucleases (URI domain) AL552_18405 SM00421 helix_turn_helix, Lux Regulon AL552_18405 SM00448 cheY-homologous receiver domain AL552_18410 SM00486 DNA polymerase type-B family AL552_18420 SM00841 Elongation factor P, C-terminal AL552_18420 SM01185 AL552_18420 AL552_18430 SM00363 S4 RNA-binding domain AL552_18445 SM00481 DNA polymerase alpha chain like domain AL552_18485 SM00100 Cyclic nucleotide-monophosphate binding domain AL552_18485 SM00419 helix_turn_helix, cAMP Regulatory protein AL552_18510 SM00387 Histidine kinase-like ATPases AL552_18510 SM00388 His Kinase A (phosphoacceptor) domain AL552_18510 SM00448 cheY-homologous receiver domain AL552_18560 SM00052 Putative diguanylate phosphodiesterase AL552_18560 SM00091 PAS domain AL552_18565 SM00729 Elongator protein 3, MiaB family, Radical SAM AL552_18570 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_18570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_18580 SM00448 cheY-homologous receiver domain AL552_18580 SM00862 Transcriptional regulatory protein, C terminal AL552_18585 SM00387 Histidine kinase-like ATPases AL552_18585 SM00388 His Kinase A (phosphoacceptor) domain AL552_18635 SM00382 ATPases associated with a variety of cellular activities AL552_18700 SM00421 helix_turn_helix, Lux Regulon AL552_18700 SM00448 cheY-homologous receiver domain AL552_18705 SM00387 Histidine kinase-like ATPases AL552_18705 SM00388 His Kinase A (phosphoacceptor) domain AL552_18720 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL552_18760 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AL552_18765 SM00028 Tetratricopeptide repeats AL552_18775 SM00411 bacterial (prokaryotic) histone like domain AL552_18780 SM00316 Ribosomal protein S1-like RNA-binding domain AL552_18795 SM00822 AL552_18795 AL552_18810 SM00481 DNA polymerase alpha chain like domain AL552_18815 SM00260 Two component signalling adaptor domain AL552_18815 SM00448 cheY-homologous receiver domain AL552_18885 SM00825 Beta-ketoacyl synthase AL552_18895 SM00822 AL552_18895 AL552_18900 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AL552_18930 SM00363 S4 RNA-binding domain AL552_18935 SM00316 Ribosomal protein S1-like RNA-binding domain AL552_18950 SM00226 Low molecular weight phosphatase family AL552_19000 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_19025 SM00267 diguanylate cyclase AL552_19030 SM00642 Alpha-amylase domain AL552_19035 SM00382 ATPases associated with a variety of cellular activities AL552_19080 SM00382 ATPases associated with a variety of cellular activities AL552_19085 SM00382 ATPases associated with a variety of cellular activities AL552_19120 SM00852 Probable molybdopterin binding domain AL552_19125 SM00729 Elongator protein 3, MiaB family, Radical SAM AL552_19140 SM00382 ATPases associated with a variety of cellular activities AL552_19140 SM00448 cheY-homologous receiver domain AL552_19145 SM00487 DEAD-like helicases superfamily AL552_19145 SM00490 helicase superfamily c-terminal domain AL552_19175 SM00900 AL552_19175 AL552_19185 SM00478 endonuclease III AL552_19185 SM00525 AL552_19185 AL552_19210 SM00479 AL552_19210 AL552_19260 SM00859 Semialdehyde dehydrogenase, NAD binding domain AL552_19315 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AL552_19315 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AL552_19315 SM00493 AL552_19315 AL552_19340 SM00870 AL552_19340 AL552_19360 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL552_19370 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_19370 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_19395 SM00098 Alkaline phosphatase homologues AL552_19460 SM00493 AL552_19460 AL552_19470 SM00382 ATPases associated with a variety of cellular activities AL552_19490 SM00448 cheY-homologous receiver domain AL552_19540 SM00859 Semialdehyde dehydrogenase, NAD binding domain AL552_19550 SM00825 Beta-ketoacyl synthase AL552_19600 SM00463 Small MutS-related domain AL552_19605 SM00855 Phosphoglycerate mutase family AL552_19695 SM00382 ATPases associated with a variety of cellular activities AL552_19705 SM00260 Two component signalling adaptor domain AL552_19710 SM00260 Two component signalling adaptor domain AL552_19720 SM00448 cheY-homologous receiver domain AL552_19725 SM00073 Histidine Phosphotransfer domain AL552_19725 SM00260 Two component signalling adaptor domain AL552_19725 SM00387 Histidine kinase-like ATPases AL552_19725 SM01231 AL552_19725 AL552_19735 SM00448 cheY-homologous receiver domain AL552_19750 SM00382 ATPases associated with a variety of cellular activities AL552_19750 SM00962 SRP54-type protein, GTPase domain AL552_19810 SM00382 ATPases associated with a variety of cellular activities AL552_19835 SM00382 ATPases associated with a variety of cellular activities AL552_19835 SM00448 cheY-homologous receiver domain AL552_19840 SM00387 Histidine kinase-like ATPases AL552_19840 SM00388 His Kinase A (phosphoacceptor) domain AL552_19845 SM00382 ATPases associated with a variety of cellular activities AL552_19940 SM01130 AL552_19940 AL552_19965 SM00028 Tetratricopeptide repeats AL552_20050 SM00479 AL552_20050 AL552_20065 SM00849 Metallo-beta-lactamase superfamily AL552_20070 SM00257 Lysin motif AL552_20085 SM00938 Nitrogen regulatory protein P-II AL552_20095 SM00977 TilS substrate C-terminal domain AL552_20105 SM00481 DNA polymerase alpha chain like domain AL552_20135 SM00935 Outer membrane protein (OmpH-like) AL552_20145 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL552_20245 SM00849 Metallo-beta-lactamase superfamily AL552_20310 SM00495 Chitin-binding domain type 3 AL552_20310 SM00636 AL552_20310 AL552_20325 SM00487 DEAD-like helicases superfamily AL552_20325 SM00490 helicase superfamily c-terminal domain AL552_20365 SM00900 AL552_20365 AL552_20425 SM00464 Found in ATP-dependent protease La (LON) AL552_20455 SM00267 diguanylate cyclase AL552_20470 SM00925 MltA specific insert domain AL552_20575 SM00420 helix_turn_helix, Deoxyribose operon repressor AL552_20575 SM01134 AL552_20575 AL552_20605 SM00354 helix_turn _helix lactose operon repressor AL552_20610 SM00479 AL552_20610 AL552_20615 SM00116 Domain in cystathionine beta-synthase and other proteins. AL552_20650 SM00354 helix_turn _helix lactose operon repressor AL552_20655 SM01038 Beta galactosidase small chain AL552_20685 SM00028 Tetratricopeptide repeats AL552_20735 SM00858 AL552_20735 AL552_20740 SM00382 ATPases associated with a variety of cellular activities AL552_20755 SM00342 helix_turn_helix, arabinose operon control protein AL552_20775 SM00838 Elongation factor G C-terminus AL552_20775 SM00889 Elongation factor G, domain IV AL552_20780 SM00382 ATPases associated with a variety of cellular activities AL552_20810 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AL552_20815 SM01133 AL552_20815 AL552_20875 SM00052 Putative diguanylate phosphodiesterase AL552_20875 SM00091 PAS domain AL552_20875 SM00267 diguanylate cyclase AL552_20895 SM00347 helix_turn_helix multiple antibiotic resistance protein AL552_20905 SM00316 Ribosomal protein S1-like RNA-binding domain AL552_20905 SM00322 K homology RNA-binding domain AL552_20910 SM01387 AL552_20910 AL552_20930 SM00316 Ribosomal protein S1-like RNA-binding domain AL552_20970 SM00382 ATPases associated with a variety of cellular activities AL552_20980 SM01103 AL552_20980 AL552_21005 SM00363 S4 RNA-binding domain AL552_21045 SM00091 PAS domain AL552_21045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_21045 SM00387 Histidine kinase-like ATPases AL552_21045 SM00388 His Kinase A (phosphoacceptor) domain AL552_21045 SM00448 cheY-homologous receiver domain AL552_21065 SM00382 ATPases associated with a variety of cellular activities AL552_21070 SM00382 ATPases associated with a variety of cellular activities AL552_21090 SM01068 Putative carbohydrate binding domain AL552_21100 SM00382 ATPases associated with a variety of cellular activities AL552_21120 SM00938 Nitrogen regulatory protein P-II AL552_21145 SM00487 DEAD-like helicases superfamily AL552_21145 SM00490 helicase superfamily c-terminal domain AL552_21145 SM00847 Helicase associated domain (HA2) Add an annotation AL552_21200 SM00382 ATPases associated with a variety of cellular activities AL552_21210 SM00947 Carbonic anhydrase AL552_21240 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_21240 SM00895 AL552_21240 AL552_21245 SM00644 AL552_21245 AL552_21310 SM00382 ATPases associated with a variety of cellular activities AL552_21310 SM00962 SRP54-type protein, GTPase domain AL552_21310 SM00963 SRP54-type protein, helical bundle domain AL552_21320 SM01091 Transporter associated domain AL552_21350 SM00829 Enoylreductase AL552_21435 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AL552_21445 SM00382 ATPases associated with a variety of cellular activities AL552_21455 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AL552_21455 SM00534 ATPase domain of DNA mismatch repair MUTS family AL552_21465 SM00257 Lysin motif AL552_21500 SM01192 AL552_21500 AL552_21500 SM01193 AL552_21500 AL552_21515 SM00954 Region found in RelA / SpoT proteins AL552_21535 SM00073 Histidine Phosphotransfer domain AL552_21535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_21535 SM00387 Histidine kinase-like ATPases AL552_21535 SM00388 His Kinase A (phosphoacceptor) domain AL552_21535 SM00448 cheY-homologous receiver domain AL552_21560 SM00358 Double-stranded RNA binding motif AL552_21560 SM00535 Ribonuclease III family AL552_21570 SM00838 Elongation factor G C-terminus AL552_21710 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL552_21725 SM00861 Transketolase, pyrimidine binding domain AL552_21745 SM00731 SprT homologues. AL552_21770 SM00732 Likely ribonuclease with RNase H fold. AL552_21780 SM00382 ATPases associated with a variety of cellular activities AL552_21800 SM01152 AL552_21800 AL552_21815 SM00729 Elongator protein 3, MiaB family, Radical SAM AL552_21835 SM00478 endonuclease III AL552_21835 SM00525 AL552_21835 AL552_21885 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_21885 SM01049 AL552_21885 AL552_21955 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL552_21990 SM00495 Chitin-binding domain type 3 AL552_22045 SM00347 helix_turn_helix multiple antibiotic resistance protein AL552_22090 SM00563 Phosphate acyltransferases AL552_22125 SM00382 ATPases associated with a variety of cellular activities AL552_22135 SM00116 Domain in cystathionine beta-synthase and other proteins. AL552_22150 SM00382 ATPases associated with a variety of cellular activities AL552_22180 SM00116 Domain in cystathionine beta-synthase and other proteins. AL552_22180 SM00924 MgtE intracellular N domain AL552_22210 SM00487 DEAD-like helicases superfamily AL552_22210 SM00490 helicase superfamily c-terminal domain AL552_22215 SM00670 Large family of predicted nucleotide-binding domains AL552_22235 SM00316 Ribosomal protein S1-like RNA-binding domain AL552_22305 SM00382 ATPases associated with a variety of cellular activities AL552_22310 SM00028 Tetratricopeptide repeats AL552_22320 SM00965 Secretin and TonB N terminus short domain AL552_22340 SM00052 Putative diguanylate phosphodiesterase AL552_22340 SM00267 diguanylate cyclase AL552_22350 SM00421 helix_turn_helix, Lux Regulon AL552_22575 SM00965 Secretin and TonB N terminus short domain AL552_22645 SM00859 Semialdehyde dehydrogenase, NAD binding domain AL552_22685 SM00919 Malic enzyme, NAD binding domain AL552_22685 SM01274 AL552_22685 AL552_22705 SM00838 Elongation factor G C-terminus AL552_22705 SM00889 Elongation factor G, domain IV AL552_22745 SM00320 WD40 repeats AL552_22785 SM00382 ATPases associated with a variety of cellular activities AL552_22810 SM00100 Cyclic nucleotide-monophosphate binding domain AL552_22810 SM00419 helix_turn_helix, cAMP Regulatory protein AL552_22815 SM01150 AL552_22815 AL552_22860 SM00967 RNA 2'-O ribose methyltransferase substrate binding AL552_22865 SM00316 Ribosomal protein S1-like RNA-binding domain AL552_22865 SM00357 Cold shock protein domain AL552_22865 SM00955 AL552_22865 AL552_22880 SM00671 Sel1-like repeats. AL552_22890 SM00788 Adenylosuccinate synthetase AL552_22900 SM00244 prohibitin homologues AL552_22905 SM00244 prohibitin homologues AL552_22925 SM00853 MutL C terminal dimerisation domain AL552_22925 SM01340 AL552_22925 AL552_22930 SM00257 Lysin motif AL552_22930 SM00646 AL552_22930 AL552_23010 SM00479 AL552_23010 AL552_23040 SM00450 Rhodanese Homology Domain AL552_23055 SM00971 Serine acetyltransferase, N-terminal AL552_23110 SM00841 Elongation factor P, C-terminal AL552_23110 SM01185 AL552_23110 AL552_23135 SM00883 Chaperonin 10 Kd subunit AL552_23160 SM00448 cheY-homologous receiver domain AL552_23160 SM00862 Transcriptional regulatory protein, C terminal AL552_23165 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_23165 SM00387 Histidine kinase-like ATPases AL552_23165 SM00388 His Kinase A (phosphoacceptor) domain AL552_23200 SM00421 helix_turn_helix, Lux Regulon AL552_23200 SM00448 cheY-homologous receiver domain AL552_23205 SM01091 Transporter associated domain AL552_23235 SM00387 Histidine kinase-like ATPases AL552_23235 SM00388 His Kinase A (phosphoacceptor) domain AL552_23235 SM00448 cheY-homologous receiver domain AL552_23250 SM00479 AL552_23250 AL552_23270 SM00878 Biotin carboxylase C-terminal domain AL552_23300 SM00382 ATPases associated with a variety of cellular activities AL552_23375 SM00862 Transcriptional regulatory protein, C terminal AL552_23380 SM00422 helix_turn_helix, mercury resistance AL552_23390 SM00798 AICARFT/IMPCHase bienzyme AL552_23390 SM00851 MGS-like domain AL552_23400 SM01209 AL552_23400 AL552_23400 SM01210 AL552_23400 AL552_23410 SM00411 bacterial (prokaryotic) histone like domain AL552_23415 SM00116 Domain in cystathionine beta-synthase and other proteins. AL552_23430 SM00986 Uracil DNA glycosylase superfamily AL552_23430 SM00987 UreE urease accessory protein, C-terminal domain AL552_23450 SM00663 RNA polymerase I subunit A N-terminus AL552_23475 SM00649 Ribosomal protein L11/L12 AL552_23480 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AL552_23480 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AL552_23540 SM00155 Phospholipase D. Active site motifs. AL552_23605 SM00360 RNA recognition motif AL552_23670 SM00487 DEAD-like helicases superfamily AL552_23705 SM00052 Putative diguanylate phosphodiesterase AL552_23705 SM00267 diguanylate cyclase AL552_23720 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL552_23735 SM00267 diguanylate cyclase AL552_23785 SM00563 Phosphate acyltransferases AL552_23810 SM00450 Rhodanese Homology Domain AL552_23825 SM00382 ATPases associated with a variety of cellular activities AL552_23830 SM00382 ATPases associated with a variety of cellular activities AL552_23830 SM00962 SRP54-type protein, GTPase domain AL552_23830 SM00963 SRP54-type protein, helical bundle domain AL552_23895 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL552_23900 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL552_23905 SM00052 Putative diguanylate phosphodiesterase AL552_23935 SM01144 AL552_23935 AL552_23940 SM00052 Putative diguanylate phosphodiesterase AL552_23940 SM00267 diguanylate cyclase AL552_23940 SM00897 FIST N domain AL552_23940 SM01204 AL552_23940 AL552_23975 SM01219 AL552_23975 AL552_24000 SM00028 Tetratricopeptide repeats AL552_24065 SM00357 Cold shock protein domain AL552_24065 SM00382 ATPases associated with a variety of cellular activities AL552_24065 SM00959 Rho termination factor, N-terminal domain AL552_24075 SM00487 DEAD-like helicases superfamily AL552_24075 SM00490 helicase superfamily c-terminal domain AL552_24095 SM00341 Helicase and RNase D C-terminal AL552_24095 SM00487 DEAD-like helicases superfamily AL552_24095 SM00490 helicase superfamily c-terminal domain AL552_24095 SM00956 AL552_24095 AL552_24105 SM00342 helix_turn_helix, arabinose operon control protein AL552_24170 SM00876 Biotin and Thiamin Synthesis associated domain AL552_24280 SM00829 Enoylreductase AL552_24315 SM00836 DALR anticodon binding domain AL552_24320 SM00642 Alpha-amylase domain AL552_24345 SM00387 Histidine kinase-like ATPases AL552_24345 SM00433 TopoisomeraseII AL552_24355 SM00480 DNA polymerase III beta subunit AL552_24360 SM00382 ATPases associated with a variety of cellular activities AL552_24360 SM00760 Bacterial dnaA protein helix-turn-helix domain AL552_24370 SM00062 Bacterial periplasmic substrate-binding proteins AL552_24370 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL552_24380 SM00382 ATPases associated with a variety of cellular activities AL552_24395 SM01234 AL552_24395 AL552_24505 SM00530 Helix-turn-helix XRE-family like proteins AL552_24520 SM01228 AL552_24520 AL552_24535 SM00470 ParB-like nuclease domain AL552_24575 SM00382 ATPases associated with a variety of cellular activities AL552_24595 SM00062 Bacterial periplasmic substrate-binding proteins AL552_24635 SM00382 ATPases associated with a variety of cellular activities AL552_24645 SM00563 Phosphate acyltransferases AL552_24715 SM00257 Lysin motif AL552_24740 SM01001 AIR carboxylase AL552_24880 SM00382 ATPases associated with a variety of cellular activities AL552_24915 SM00736 Dystroglycan-type cadherin-like domains. AL552_24935 SM00220 Serine/Threonine protein kinases, catalytic domain AL552_24940 SM00354 helix_turn _helix lactose operon repressor AL552_25005 SM00344 helix_turn_helix ASNC type AL552_25010 SM00052 Putative diguanylate phosphodiesterase AL552_25010 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL552_25010 SM00091 PAS domain AL552_25010 SM00267 diguanylate cyclase AL552_25050 SM00382 ATPases associated with a variety of cellular activities AL552_25055 SM00749 bacterial OsmY and nodulation domain AL552_25075 SM00046 Diacylglycerol kinase catalytic domain (presumed) AL552_25075 SM00195 Dual specificity phosphatase, catalytic domain AL552_25075 SM00404 Protein tyrosine phosphatase, catalytic domain motif AL552_25110 SM00052 Putative diguanylate phosphodiesterase AL552_25110 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL552_25110 SM00091 PAS domain AL552_25110 SM00267 diguanylate cyclase AL552_25170 SM01004 Delta-aminolevulinic acid dehydratase AL552_25185 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AL552_25185 SM00474 3'-5' exonuclease AL552_25185 SM00475 5'-3' exonuclease AL552_25185 SM00482 DNA polymerase A domain AL552_25225 SM00729 Elongator protein 3, MiaB family, Radical SAM AL552_25235 SM00052 Putative diguanylate phosphodiesterase AL552_25235 SM00267 diguanylate cyclase AL552_25235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_25240 SM00382 ATPases associated with a variety of cellular activities AL552_25240 SM00448 cheY-homologous receiver domain AL552_25245 SM00091 PAS domain AL552_25245 SM00387 Histidine kinase-like ATPases AL552_25245 SM00388 His Kinase A (phosphoacceptor) domain AL552_25255 SM01230 AL552_25255