locus-tag class description AL468_00010 PF00155 Aminotransferase class I and II AL468_00025 PF00155 Aminotransferase class I and II AL468_00025 PF00392 Bacterial regulatory proteins, gntR family AL468_00035 PF01336 OB-fold nucleic acid binding domain AL468_00035 PF00152 tRNA synthetases class II (D, K and N) AL468_00040 PF17200 Single Cache domain 2 AL468_00040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL468_00040 PF00672 HAMP domain AL468_00045 PF01242 6-pyruvoyl tetrahydropterin synthase AL468_00055 PF00563 EAL domain AL468_00055 PF04940 Sensors of blue-light using FAD AL468_00060 PF03315 Serine dehydratase beta chain AL468_00060 PF03313 Serine dehydratase alpha chain AL468_00065 PF03222 Tryptophan/tyrosine permease family AL468_00070 PF00293 NUDIX domain AL468_00080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_00080 PF00072 Response regulator receiver domain AL468_00080 PF00512 His Kinase A (phospho-acceptor) domain AL468_00080 PF09308 LuxQ, periplasmic AL468_00085 PF04715 Anthranilate synthase component I, N terminal region AL468_00085 PF00425 chorismate binding enzyme AL468_00105 PF04317 YcjX-like family, DUF463 AL468_00110 PF05128 Domain of unknown function (DUF697) AL468_00115 PF18024 Helix-turn-helix domain AL468_00115 PF00158 Sigma-54 interaction domain AL468_00120 PF13302 Acetyltransferase (GNAT) domain AL468_00135 PF00589 Phage integrase family AL468_00135 PF13495 Phage integrase, N-terminal SAM-like domain AL468_00210 PF03544 Gram-negative bacterial TonB protein C-terminal AL468_00330 PF03544 Gram-negative bacterial TonB protein C-terminal AL468_00440 PF02016 LD-carboxypeptidase N-terminal domain AL468_00440 PF17676 LD-carboxypeptidase C-terminal domain AL468_00675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL468_00840 PF10609 NUBPL iron-transfer P-loop NTPase AL468_00850 PF04229 GrpB protein AL468_00850 PF13673 Acetyltransferase (GNAT) domain AL468_01135 PF00677 Lumazine binding domain AL468_01255 PF13333 Integrase core domain AL468_01255 PF00665 Integrase core domain AL468_01255 PF13276 HTH-like domain AL468_01260 PF13333 Integrase core domain AL468_01260 PF00665 Integrase core domain AL468_01260 PF13276 HTH-like domain AL468_01310 PF02798 Glutathione S-transferase, N-terminal domain AL468_01350 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AL468_01350 PF01411 tRNA synthetases class II (A) AL468_01380 PF07237 Protein of unknown function (DUF1428) AL468_01390 PF01810 LysE type translocator AL468_01405 PF13533 Biotin-lipoyl like AL468_01415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_01415 PF03466 LysR substrate binding domain AL468_01425 PF13533 Biotin-lipoyl like AL468_01440 PF13533 Biotin-lipoyl like AL468_01455 PF17203 Single cache domain 3 AL468_01455 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AL468_01455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_01455 PF00989 PAS fold AL468_01460 PF12431 Transcriptional regulator AL468_01460 PF00072 Response regulator receiver domain AL468_01465 PF07715 TonB-dependent Receptor Plug Domain AL468_01465 PF00593 TonB dependent receptor AL468_01470 PF12833 Helix-turn-helix domain AL468_01475 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AL468_01475 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AL468_01480 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AL468_01485 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AL468_01485 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL468_01505 PF01590 GAF domain AL468_01505 PF02954 Bacterial regulatory protein, Fis family AL468_01505 PF00158 Sigma-54 interaction domain AL468_01510 PF00171 Aldehyde dehydrogenase family AL468_01530 PF12833 Helix-turn-helix domain AL468_01550 PF16697 Inner membrane component of T3SS, cytoplasmic domain AL468_01550 PF16693 Inner membrane component of T3SS, periplasmic domain AL468_01560 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF AL468_01565 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) AL468_01575 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI AL468_01580 PF01514 Secretory protein of YscJ/FliF family AL468_01590 PF02108 Flagellar assembly protein FliH AL468_01600 PF02661 Fic/DOC family AL468_01645 PF13533 Biotin-lipoyl like AL468_01655 PF00440 Bacterial regulatory proteins, tetR family AL468_01655 PF08360 QacR-like protein, C-terminal region AL468_01660 PF01312 FlhB HrpN YscU SpaS Family AL468_01665 PF01311 Bacterial export proteins, family 1 AL468_01670 PF01313 Bacterial export proteins, family 3 AL468_01675 PF00813 FliP family AL468_01680 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AL468_01695 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL468_01695 PF18269 T3SS EscN ATPase C-terminal domain AL468_01695 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL468_01705 PF09059 TyeA AL468_01725 PF00771 FHIPEP family AL468_01730 PF09621 Type III secretion system regulator (LcrR) AL468_01740 PF04792 V antigen (LcrV) protein AL468_01745 PF07720 Tetratricopeptide repeat AL468_01755 PF05844 YopD protein AL468_01765 PF16868 NMT1-like family AL468_01770 PF01925 Sulfite exporter TauE/SafE AL468_01780 PF01970 Tripartite tricarboxylate transporter TctA family AL468_01810 PF00285 Citrate synthase, C-terminal domain AL468_01815 PF00694 Aconitase C-terminal domain AL468_01815 PF00330 Aconitase family (aconitate hydratase) AL468_01820 PF04303 PrpF protein AL468_01825 PF00501 AMP-binding enzyme AL468_01825 PF13193 AMP-binding enzyme C-terminal domain AL468_01825 PF16177 Acetyl-coenzyme A synthetase N-terminus AL468_01835 PF00089 Trypsin AL468_01850 PF04055 Radical SAM superfamily AL468_01855 PF06508 Queuosine biosynthesis protein QueC AL468_01860 PF07694 5TMR of 5TMR-LYT AL468_01860 PF00990 Diguanylate cyclase, GGDEF domain AL468_01870 PF00691 OmpA family AL468_01870 PF05736 OprF membrane domain AL468_01885 PF05736 OprF membrane domain AL468_01885 PF00691 OmpA family AL468_01900 PF10672 S-adenosylmethionine-dependent methyltransferase AL468_01900 PF17785 PUA-like domain AL468_01905 PF00672 HAMP domain AL468_01905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL468_01905 PF02743 Cache domain AL468_01910 PF00708 Acylphosphatase AL468_01915 PF04358 DsrC like protein AL468_01925 PF01027 Inhibitor of apoptosis-promoting Bax1 AL468_01930 PF00005 ABC transporter AL468_01935 PF00528 Binding-protein-dependent transport system inner membrane component AL468_01940 PF00528 Binding-protein-dependent transport system inner membrane component AL468_01945 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL468_01955 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL468_01955 PF14824 Sirohaem biosynthesis protein central AL468_01955 PF10414 Sirohaem synthase dimerisation region AL468_01960 PF04461 Protein of unknown function (DUF520) AL468_01965 PF00793 DAHP synthetase I family AL468_01985 PF01189 16S rRNA methyltransferase RsmB/F AL468_01985 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AL468_01985 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AL468_01990 PF02470 MlaD protein AL468_01995 PF04403 Paraquat-inducible protein A AL468_02000 PF00005 ABC transporter AL468_02000 PF00664 ABC transporter transmembrane region AL468_02005 PF13185 GAF domain AL468_02010 PF17516 ProQ C-terminal domain AL468_02010 PF04352 ProQ/FINO family AL468_02015 PF03572 Peptidase family S41 AL468_02015 PF00595 PDZ domain AL468_02015 PF17804 Tail specific protease N-terminal domain AL468_02015 PF11818 C-terminal domain of tail specific protease (DUF3340) AL468_02025 PF01433 Peptidase family M1 domain AL468_02025 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AL468_02025 PF11940 Domain of unknown function (DUF3458) Ig-like fold AL468_02035 PF05088 Bacterial NAD-glutamate dehydrogenase AL468_02040 PF01180 Dihydroorotate dehydrogenase AL468_02045 PF07126 Cell-division protein ZapC AL468_02050 PF01170 Putative RNA methylase family UPF0020 AL468_02050 PF02926 THUMP domain AL468_02050 PF10672 S-adenosylmethionine-dependent methyltransferase AL468_02070 PF04957 Ribosome modulation factor AL468_02075 PF07977 FabA-like domain AL468_02080 PF05362 Lon protease (S16) C-terminal proteolytic domain AL468_02080 PF13654 AAA domain AL468_02085 PF17414 MatP C-terminal ribbon-helix-helix domain AL468_02085 PF06303 MatP N-terminal domain AL468_02115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_02115 PF00072 Response regulator receiver domain AL468_02115 PF09308 LuxQ, periplasmic AL468_02115 PF00512 His Kinase A (phospho-acceptor) domain AL468_02130 PF00115 Cytochrome C and Quinol oxidase polypeptide I AL468_02145 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AL468_02145 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AL468_02155 PF00403 Heavy-metal-associated domain AL468_02170 PF00027 Cyclic nucleotide-binding domain AL468_02170 PF13545 Crp-like helix-turn-helix domain AL468_02175 PF00582 Universal stress protein family AL468_02180 PF01171 PP-loop family AL468_02200 PF08402 TOBE domain AL468_02200 PF00005 ABC transporter AL468_02205 PF00528 Binding-protein-dependent transport system inner membrane component AL468_02210 PF00528 Binding-protein-dependent transport system inner membrane component AL468_02215 PF13416 Bacterial extracellular solute-binding protein AL468_02220 PF13416 Bacterial extracellular solute-binding protein AL468_02225 PF02146 Sir2 family AL468_02230 PF00909 Ammonium Transporter Family AL468_02260 PF13247 4Fe-4S dicluster domain AL468_02265 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL468_02265 PF00384 Molybdopterin oxidoreductase AL468_02265 PF01568 Molydopterin dinucleotide binding domain AL468_02275 PF02613 Nitrate reductase delta subunit AL468_02295 PF02634 FdhD/NarQ family AL468_02300 PF12848 ABC transporter AL468_02300 PF00005 ABC transporter AL468_02310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_02310 PF00512 His Kinase A (phospho-acceptor) domain AL468_02315 PF00158 Sigma-54 interaction domain AL468_02315 PF00072 Response regulator receiver domain AL468_02315 PF02954 Bacterial regulatory protein, Fis family AL468_02320 PF12849 PBP superfamily domain AL468_02325 PF00528 Binding-protein-dependent transport system inner membrane component AL468_02330 PF08402 TOBE domain AL468_02330 PF00005 ABC transporter AL468_02335 PF12804 MobA-like NTP transferase domain AL468_02340 PF03454 MoeA C-terminal region (domain IV) AL468_02340 PF03453 MoeA N-terminal region (domain I and II) AL468_02340 PF00994 Probable molybdopterin binding domain AL468_02350 PF00480 ROK family AL468_02390 PF00877 NlpC/P60 family AL468_02400 PF05230 MASE2 domain AL468_02400 PF00990 Diguanylate cyclase, GGDEF domain AL468_02405 PF00072 Response regulator receiver domain AL468_02405 PF01339 CheB methylesterase AL468_02420 PF00677 Lumazine binding domain AL468_02425 PF01554 MatE AL468_02435 PF01068 ATP dependent DNA ligase domain AL468_02435 PF14743 DNA ligase OB-like domain AL468_02440 PF01740 STAS domain AL468_02450 PF10531 SLBB domain AL468_02450 PF02563 Polysaccharide biosynthesis/export protein AL468_02465 PF00072 Response regulator receiver domain AL468_02465 PF02954 Bacterial regulatory protein, Fis family AL468_02465 PF00158 Sigma-54 interaction domain AL468_02470 PF13439 Glycosyltransferase Family 4 AL468_02470 PF00534 Glycosyl transferases group 1 AL468_02475 PF13439 Glycosyltransferase Family 4 AL468_02475 PF00534 Glycosyl transferases group 1 AL468_02505 PF13439 Glycosyltransferase Family 4 AL468_02505 PF00534 Glycosyl transferases group 1 AL468_02515 PF02397 Bacterial sugar transferase AL468_02525 PF02028 BCCT, betaine/carnitine/choline family transporter AL468_02540 PF00270 DEAD/DEAH box helicase AL468_02540 PF11898 Domain of unknown function (DUF3418) AL468_02540 PF04408 Helicase associated domain (HA2) AL468_02540 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AL468_02540 PF00271 Helicase conserved C-terminal domain AL468_02545 PF02525 Flavodoxin-like fold AL468_02580 PF00990 Diguanylate cyclase, GGDEF domain AL468_02590 PF00012 Hsp70 protein AL468_02595 PF00012 Hsp70 protein AL468_02615 PF14245 Type IV pilin PilA AL468_02615 PF07963 Prokaryotic N-terminal methylation motif AL468_02620 PF00005 ABC transporter AL468_02620 PF00664 ABC transporter transmembrane region AL468_02625 PF00664 ABC transporter transmembrane region AL468_02625 PF00005 ABC transporter AL468_02635 PF07715 TonB-dependent Receptor Plug Domain AL468_02635 PF00593 TonB dependent receptor AL468_02640 PF01032 FecCD transport family AL468_02645 PF01497 Periplasmic binding protein AL468_02650 PF00005 ABC transporter AL468_02665 PF03222 Tryptophan/tyrosine permease family AL468_02670 PF00465 Iron-containing alcohol dehydrogenase AL468_02675 PF01966 HD domain AL468_02685 PF03741 Integral membrane protein TerC family AL468_02695 PF04055 Radical SAM superfamily AL468_02700 PF11230 Protein of unknown function (DUF3029) AL468_02705 PF01810 LysE type translocator AL468_02710 PF01966 HD domain AL468_02710 PF11871 Domain of unknown function (DUF3391) AL468_02715 PF03707 Bacterial signalling protein N terminal repeat AL468_02715 PF00563 EAL domain AL468_02715 PF00990 Diguanylate cyclase, GGDEF domain AL468_02720 PF00072 Response regulator receiver domain AL468_02720 PF02954 Bacterial regulatory protein, Fis family AL468_02720 PF00158 Sigma-54 interaction domain AL468_02725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_02725 PF00512 His Kinase A (phospho-acceptor) domain AL468_02730 PF00939 Sodium:sulfate symporter transmembrane region AL468_02750 PF00072 Response regulator receiver domain AL468_02750 PF00990 Diguanylate cyclase, GGDEF domain AL468_02755 PF03928 Haem-degrading AL468_02760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AL468_02760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AL468_02765 PF00455 DeoR C terminal sensor domain AL468_02765 PF08220 DeoR-like helix-turn-helix domain AL468_02780 PF04055 Radical SAM superfamily AL468_02780 PF13186 Iron-sulfur cluster-binding domain AL468_02785 PF03781 Sulfatase-modifying factor enzyme 1 AL468_02795 PF00884 Sulfatase AL468_02800 PF00696 Amino acid kinase family AL468_02800 PF13840 ACT domain AL468_02805 PF06339 Ectoine synthase AL468_02810 PF00202 Aminotransferase class-III AL468_02815 PF00583 Acetyltransferase (GNAT) family AL468_02820 PF02028 BCCT, betaine/carnitine/choline family transporter AL468_02835 PF00571 CBS domain AL468_02835 PF00005 ABC transporter AL468_02840 PF00528 Binding-protein-dependent transport system inner membrane component AL468_02845 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AL468_02855 PF00501 AMP-binding enzyme AL468_02875 PF00072 Response regulator receiver domain AL468_02875 PF00486 Transcriptional regulatory protein, C terminal AL468_02880 PF08521 Two-component sensor kinase N-terminal AL468_02880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_02880 PF00512 His Kinase A (phospho-acceptor) domain AL468_02885 PF00884 Sulfatase AL468_02910 PF01235 Sodium:alanine symporter family AL468_02920 PF01810 LysE type translocator AL468_02925 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AL468_02930 PF03279 Bacterial lipid A biosynthesis acyltransferase AL468_02935 PF13520 Amino acid permease AL468_02940 PF00893 Small Multidrug Resistance protein AL468_02950 PF04204 Homoserine O-succinyltransferase AL468_02965 PF00990 Diguanylate cyclase, GGDEF domain AL468_02965 PF03707 Bacterial signalling protein N terminal repeat AL468_02965 PF00563 EAL domain AL468_02970 PF00672 HAMP domain AL468_02970 PF00072 Response regulator receiver domain AL468_02970 PF01627 Hpt domain AL468_02970 PF00512 His Kinase A (phospho-acceptor) domain AL468_02970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_02970 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL468_02985 PF00132 Bacterial transferase hexapeptide (six repeats) AL468_02985 PF12464 Maltose acetyltransferase AL468_03000 PF04237 YjbR AL468_03005 PF01047 MarR family AL468_03015 PF00196 Bacterial regulatory proteins, luxR family AL468_03015 PF00563 EAL domain AL468_03050 PF14497 Glutathione S-transferase, C-terminal domain AL468_03050 PF02798 Glutathione S-transferase, N-terminal domain AL468_03060 PF04209 homogentisate 1,2-dioxygenase AL468_03065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL468_03070 PF07687 Peptidase dimerisation domain AL468_03070 PF01546 Peptidase family M20/M25/M40 AL468_03075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL468_03080 PF00528 Binding-protein-dependent transport system inner membrane component AL468_03085 PF12911 N-terminal TM domain of oligopeptide transport permease C AL468_03085 PF00528 Binding-protein-dependent transport system inner membrane component AL468_03090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL468_03090 PF00005 ABC transporter AL468_03095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL468_03095 PF00005 ABC transporter AL468_03105 PF08453 Peptidase family M9 N-terminal AL468_03105 PF01752 Collagenase AL468_03115 PF00528 Binding-protein-dependent transport system inner membrane component AL468_03120 PF00528 Binding-protein-dependent transport system inner membrane component AL468_03125 PF00005 ABC transporter AL468_03125 PF08402 TOBE domain AL468_03130 PF00701 Dihydrodipicolinate synthetase family AL468_03135 PF02423 Ornithine cyclodeaminase/mu-crystallin family AL468_03145 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AL468_03145 PF01266 FAD dependent oxidoreductase AL468_03150 PF05544 Proline racemase AL468_03155 PF00171 Aldehyde dehydrogenase family AL468_03160 PF00392 Bacterial regulatory proteins, gntR family AL468_03180 PF05971 RNA methyltransferase AL468_03185 PF01863 Protein of unknown function DUF45 AL468_03195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_03195 PF03466 LysR substrate binding domain AL468_03215 PF00005 ABC transporter AL468_03220 PF01032 FecCD transport family AL468_03225 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AL468_03240 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AL468_03245 PF02654 Cobalamin-5-phosphate synthase AL468_03250 PF02277 Phosphoribosyltransferase AL468_03255 PF13460 NAD(P)H-binding AL468_03265 PF00929 Exonuclease AL468_03265 PF08411 Exonuclease C-terminal AL468_03270 PF03788 LrgA family AL468_03275 PF04172 LrgB-like family AL468_03280 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region AL468_03280 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AL468_03285 PF02222 ATP-grasp domain AL468_03290 PF05724 Thiopurine S-methyltransferase (TPMT) AL468_03300 PF00216 Bacterial DNA-binding protein AL468_03310 PF01588 Putative tRNA binding domain AL468_03310 PF03484 tRNA synthetase B5 domain AL468_03310 PF03483 B3/4 domain AL468_03310 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AL468_03310 PF03147 Ferredoxin-fold anticodon binding domain AL468_03315 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AL468_03315 PF01409 tRNA synthetases class II core domain (F) AL468_03345 PF01906 Putative heavy-metal-binding AL468_03350 PF00453 Ribosomal protein L20 AL468_03355 PF01632 Ribosomal protein L35 AL468_03360 PF00707 Translation initiation factor IF-3, C-terminal domain AL468_03360 PF05198 Translation initiation factor IF-3, N-terminal domain AL468_03365 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AL468_03365 PF03129 Anticodon binding domain AL468_03365 PF02824 TGS domain AL468_03365 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AL468_03380 PF07702 UTRA domain AL468_03380 PF00392 Bacterial regulatory proteins, gntR family AL468_03385 PF01979 Amidohydrolase family AL468_03390 PF00491 Arginase family AL468_03395 PF17391 Urocanase N-terminal domain AL468_03395 PF17392 Urocanase C-terminal domain AL468_03395 PF01175 Urocanase Rossmann-like domain AL468_03400 PF00221 Aromatic amino acid lyase AL468_03415 PF02913 FAD linked oxidases, C-terminal domain AL468_03415 PF01565 FAD binding domain AL468_03415 PF13183 4Fe-4S dicluster domain AL468_03430 PF05736 OprF membrane domain AL468_03430 PF00691 OmpA family AL468_03450 PF01259 SAICAR synthetase AL468_03455 PF16655 PhoD-like phosphatase, N-terminal domain AL468_03455 PF09423 PhoD-like phosphatase AL468_03465 PF08482 ATP-dependent helicase C-terminal AL468_03465 PF00271 Helicase conserved C-terminal domain AL468_03465 PF04408 Helicase associated domain (HA2) AL468_03465 PF00270 DEAD/DEAH box helicase AL468_03470 PF03949 Malic enzyme, NAD binding domain AL468_03470 PF00390 Malic enzyme, N-terminal domain AL468_03475 PF02698 DUF218 domain AL468_03480 PF00939 Sodium:sulfate symporter transmembrane region AL468_03485 PF00990 Diguanylate cyclase, GGDEF domain AL468_03485 PF00072 Response regulator receiver domain AL468_03495 PF00266 Aminotransferase class-V AL468_03505 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL468_03510 PF00005 ABC transporter AL468_03510 PF00664 ABC transporter transmembrane region AL468_03515 PF00664 ABC transporter transmembrane region AL468_03515 PF00005 ABC transporter AL468_03520 PF00291 Pyridoxal-phosphate dependent enzyme AL468_03525 PF00266 Aminotransferase class-V AL468_03535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_03535 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL468_03535 PF00512 His Kinase A (phospho-acceptor) domain AL468_03550 PF04994 TfoX C-terminal domain AL468_03550 PF04993 TfoX N-terminal domain AL468_03565 PF03956 Lysine exporter LysO AL468_03575 PF00282 Pyridoxal-dependent decarboxylase conserved domain AL468_03580 PF01380 SIS domain AL468_03580 PF01418 Helix-turn-helix domain, rpiR family AL468_03585 PF00465 Iron-containing alcohol dehydrogenase AL468_03595 PF00462 Glutaredoxin AL468_03600 PF02080 TrkA-C domain AL468_03600 PF06826 Predicted Permease Membrane Region AL468_03605 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AL468_03605 PF12241 Trans-2-enoyl-CoA reductase catalytic region AL468_03605 PF07055 Enoyl reductase FAD binding domain AL468_03610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL468_03610 PF02770 Acyl-CoA dehydrogenase, middle domain AL468_03610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL468_03610 PF09317 Domain of unknown function (DUF1974) AL468_03615 PF16295 Tetracyclin repressor-like, C-terminal domain AL468_03615 PF00440 Bacterial regulatory proteins, tetR family AL468_03625 PF06965 Na+/H+ antiporter 1 AL468_03640 PF00005 ABC transporter AL468_03650 PF11066 Protein of unknown function (DUF2867) AL468_03650 PF13460 NAD(P)H-binding AL468_03655 PF03264 NapC/NirT cytochrome c family, N-terminal region AL468_03670 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) AL468_03685 PF07690 Major Facilitator Superfamily AL468_03695 PF00849 RNA pseudouridylate synthase AL468_03695 PF01479 S4 domain AL468_03700 PF00271 Helicase conserved C-terminal domain AL468_03700 PF04851 Type III restriction enzyme, res subunit AL468_03710 PF00072 Response regulator receiver domain AL468_03710 PF00486 Transcriptional regulatory protein, C terminal AL468_03715 PF00672 HAMP domain AL468_03715 PF00512 His Kinase A (phospho-acceptor) domain AL468_03715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_03725 PF01386 Ribosomal L25p family AL468_03730 PF00583 Acetyltransferase (GNAT) family AL468_03735 PF00149 Calcineurin-like phosphoesterase AL468_03735 PF02872 5'-nucleotidase, C-terminal domain AL468_03745 PF06945 Protein of unknown function (DUF1289) AL468_03755 PF13416 Bacterial extracellular solute-binding protein AL468_03760 PF00528 Binding-protein-dependent transport system inner membrane component AL468_03765 PF00005 ABC transporter AL468_03770 PF01066 CDP-alcohol phosphatidyltransferase AL468_03785 PF00158 Sigma-54 interaction domain AL468_03785 PF01590 GAF domain AL468_03790 PF03063 Prismane/CO dehydrogenase family AL468_03795 PF00111 2Fe-2S iron-sulfur cluster binding domain AL468_03795 PF00970 Oxidoreductase FAD-binding domain AL468_03795 PF00175 Oxidoreductase NAD-binding domain AL468_03805 PF00849 RNA pseudouridylate synthase AL468_03810 PF00209 Sodium:neurotransmitter symporter family AL468_03815 PF13396 Phospholipase_D-nuclease N-terminal AL468_03815 PF13091 PLD-like domain AL468_03820 PF01053 Cys/Met metabolism PLP-dependent enzyme AL468_03825 PF00561 alpha/beta hydrolase fold AL468_03830 PF03280 Proteobacterial lipase chaperone protein AL468_03835 PF03352 Methyladenine glycosylase AL468_03840 PF00873 AcrB/AcrD/AcrF family AL468_03845 PF13533 Biotin-lipoyl like AL468_03855 PF04024 PspC domain AL468_03860 PF06667 Phage shock protein B AL468_03865 PF04012 PspA/IM30 family AL468_03870 PF02954 Bacterial regulatory protein, Fis family AL468_03870 PF00158 Sigma-54 interaction domain AL468_03875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL468_03880 PF00528 Binding-protein-dependent transport system inner membrane component AL468_03885 PF00528 Binding-protein-dependent transport system inner membrane component AL468_03885 PF12911 N-terminal TM domain of oligopeptide transport permease C AL468_03890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL468_03890 PF00005 ABC transporter AL468_03895 PF00005 ABC transporter AL468_03905 PF02833 DHHA2 domain AL468_03905 PF01368 DHH family AL468_03915 PF16874 Glycosyl hydrolase family 36 C-terminal domain AL468_03915 PF16875 Glycosyl hydrolase family 36 N-terminal domain AL468_03920 PF18364 Molybdopterin oxidoreductase N-terminal domain AL468_03920 PF00384 Molybdopterin oxidoreductase AL468_03920 PF01568 Molydopterin dinucleotide binding domain AL468_03925 PF03264 NapC/NirT cytochrome c family, N-terminal region AL468_03930 PF06796 Periplasmic nitrate reductase protein NapE AL468_03935 PF03649 Uncharacterised protein family (UPF0014) AL468_03945 PF01226 Formate/nitrite transporter AL468_03970 PF02698 DUF218 domain AL468_03975 PF00265 Thymidine kinase AL468_03980 PF09190 DALR domain AL468_03980 PF01406 tRNA synthetases class I (C) catalytic domain AL468_03985 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AL468_03990 PF00149 Calcineurin-like phosphoesterase AL468_03995 PF08668 HDOD domain AL468_03995 PF00563 EAL domain AL468_04000 PF02810 SEC-C motif AL468_04005 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AL468_04005 PF01502 Phosphoribosyl-AMP cyclohydrolase AL468_04010 PF00977 Histidine biosynthesis protein AL468_04015 PF00977 Histidine biosynthesis protein AL468_04020 PF00117 Glutamine amidotransferase class-I AL468_04025 PF08645 Polynucleotide kinase 3 phosphatase AL468_04025 PF00475 Imidazoleglycerol-phosphate dehydratase AL468_04030 PF00155 Aminotransferase class I and II AL468_04035 PF00815 Histidinol dehydrogenase AL468_04040 PF08029 HisG, C-terminal domain AL468_04040 PF01634 ATP phosphoribosyltransferase AL468_04045 PF02954 Bacterial regulatory protein, Fis family AL468_04045 PF00158 Sigma-54 interaction domain AL468_04045 PF00072 Response regulator receiver domain AL468_04050 PF03553 Na+/H+ antiporter family AL468_04055 PF00816 H-NS histone family AL468_04060 PF00294 pfkB family carbohydrate kinase AL468_04075 PF04356 Protein of unknown function (DUF489) AL468_04080 PF08328 Adenylosuccinate lyase C-terminal AL468_04080 PF00206 Lyase AL468_04090 PF16036 Chalcone isomerase-like AL468_04115 PF00106 short chain dehydrogenase AL468_04125 PF01435 Peptidase family M48 AL468_04140 PF08241 Methyltransferase domain AL468_04145 PF00155 Aminotransferase class I and II AL468_04150 PF06968 Biotin and Thiamin Synthesis associated domain AL468_04150 PF04055 Radical SAM superfamily AL468_04170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AL468_04170 PF02403 Seryl-tRNA synthetase N-terminal domain AL468_04175 PF00004 ATPase family associated with various cellular activities (AAA) AL468_04175 PF16193 AAA C-terminal domain AL468_04175 PF12002 MgsA AAA+ ATPase C terminal AL468_04180 PF03548 Outer membrane lipoprotein carrier protein LolA AL468_04185 PF01580 FtsK/SpoIIIE family AL468_04185 PF17854 FtsK alpha domain AL468_04185 PF09397 Ftsk gamma domain AL468_04185 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AL468_04190 PF01037 Lrp/AsnC ligand binding domain AL468_04195 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AL468_04195 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AL468_04205 PF03466 LysR substrate binding domain AL468_04205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_04215 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AL468_04220 PF00672 HAMP domain AL468_04220 PF12729 Four helix bundle sensory module for signal transduction AL468_04220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL468_04230 PF03372 Endonuclease/Exonuclease/phosphatase family AL468_04240 PF00579 tRNA synthetases class I (W and Y) AL468_04255 PF00873 AcrB/AcrD/AcrF family AL468_04260 PF00529 HlyD membrane-fusion protein of T1SS AL468_04260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL468_04265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL468_04265 PF00672 HAMP domain AL468_04275 PF06610 L-alanine exporter AL468_04280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_04280 PF09308 LuxQ, periplasmic AL468_04280 PF00072 Response regulator receiver domain AL468_04280 PF00512 His Kinase A (phospho-acceptor) domain AL468_04290 PF03738 Glutathionylspermidine synthase preATP-grasp AL468_04300 PF03994 Domain of Unknown Function (DUF350) AL468_04310 PF02445 Quinolinate synthetase A protein AL468_04315 PF16331 TolA binding protein trimerisation AL468_04315 PF13174 Tetratricopeptide repeat AL468_04320 PF00691 OmpA family AL468_04325 PF07676 WD40-like Beta Propeller Repeat AL468_04325 PF04052 TolB amino-terminal domain AL468_04335 PF02472 Biopolymer transport protein ExbD/TolR AL468_04340 PF01618 MotA/TolQ/ExbB proton channel family AL468_04345 PF03061 Thioesterase superfamily AL468_04355 PF08173 Membrane bound YbgT-like protein AL468_04360 PF02322 Cytochrome bd terminal oxidase subunit II AL468_04365 PF01654 Cytochrome bd terminal oxidase subunit I AL468_04370 PF05496 Holliday junction DNA helicase RuvB P-loop domain AL468_04370 PF17864 RuvB AAA lid domain AL468_04370 PF05491 RuvB C-terminal winged helix domain AL468_04375 PF07499 RuvA, C-terminal domain AL468_04375 PF01330 RuvA N terminal domain AL468_04380 PF02075 Crossover junction endodeoxyribonuclease RuvC AL468_04385 PF01709 Transcriptional regulator AL468_04390 PF01336 OB-fold nucleic acid binding domain AL468_04390 PF00152 tRNA synthetases class II (D, K and N) AL468_04390 PF02938 GAD domain AL468_04395 PF01904 Protein of unknown function DUF72 AL468_04400 PF13649 Methyltransferase domain AL468_04405 PF08003 Protein of unknown function (DUF1698) AL468_04415 PF18030 RimK PreATP-grasp domain AL468_04415 PF08443 RimK-like ATP-grasp domain AL468_04435 PF16330 MukB hinge domain AL468_04435 PF04310 MukB N-terminal AL468_04440 PF04288 MukE-like family AL468_04445 PF17192 MukF middle domain AL468_04445 PF03882 MukF winged-helix domain AL468_04445 PF17193 MukF C-terminal domain AL468_04455 PF02698 DUF218 domain AL468_04460 PF00072 Response regulator receiver domain AL468_04460 PF00486 Transcriptional regulatory protein, C terminal AL468_04465 PF02613 Nitrate reductase delta subunit AL468_04470 PF00356 Bacterial regulatory proteins, lacI family AL468_04475 PF04994 TfoX C-terminal domain AL468_04475 PF04993 TfoX N-terminal domain AL468_04495 PF00534 Glycosyl transferases group 1 AL468_04495 PF08323 Starch synthase catalytic domain AL468_04500 PF00483 Nucleotidyl transferase AL468_04505 PF01131 DNA topoisomerase AL468_04505 PF01396 Topoisomerase DNA binding C4 zinc finger AL468_04505 PF08272 Topoisomerase I zinc-ribbon-like AL468_04505 PF01751 Toprim domain AL468_04510 PF10692 Protein of unknown function (DUF2498) AL468_04515 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AL468_04525 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AL468_04530 PF04376 Arginine-tRNA-protein transferase, N terminus AL468_04530 PF04377 Arginine-tRNA-protein transferase, C terminus AL468_04535 PF01176 Translation initiation factor 1A / IF-1 AL468_04540 PF00004 ATPase family associated with various cellular activities (AAA) AL468_04540 PF17871 AAA lid domain AL468_04540 PF02861 Clp amino terminal domain, pathogenicity island component AL468_04540 PF10431 C-terminal, D2-small domain, of ClpB protein AL468_04540 PF07724 AAA domain (Cdc48 subfamily) AL468_04545 PF02617 ATP-dependent Clp protease adaptor protein ClpS AL468_04550 PF00313 'Cold-shock' DNA-binding domain AL468_04555 PF03971 Monomeric isocitrate dehydrogenase AL468_04560 PF00849 RNA pseudouridylate synthase AL468_04565 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AL468_04575 PF13307 Helicase C-terminal domain AL468_04575 PF06733 DEAD_2 AL468_04580 PF01925 Sulfite exporter TauE/SafE AL468_04585 PF07445 Primosomal replication protein priC AL468_04590 PF10689 Protein of unknown function (DUF2496) AL468_04595 PF03372 Endonuclease/Exonuclease/phosphatase family AL468_04605 PF00528 Binding-protein-dependent transport system inner membrane component AL468_04610 PF00528 Binding-protein-dependent transport system inner membrane component AL468_04615 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL468_04620 PF00005 ABC transporter AL468_04640 PF02901 Pyruvate formate lyase-like AL468_04640 PF01228 Glycine radical AL468_04650 PF04055 Radical SAM superfamily AL468_04660 PF03887 YfbU domain AL468_04670 PF06798 PrkA serine protein kinase C-terminal domain AL468_04670 PF08298 PrkA AAA domain AL468_04675 PF04285 Protein of unknown function (DUF444) AL468_04680 PF04293 SpoVR like protein AL468_04685 PF02348 Cytidylyltransferase AL468_04690 PF03966 Trm112p-like protein AL468_04695 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AL468_04700 PF00005 ABC transporter AL468_04700 PF00664 ABC transporter transmembrane region AL468_04705 PF00753 Metallo-beta-lactamase superfamily AL468_04705 PF13567 Domain of unknown function (DUF4131) AL468_04705 PF03772 Competence protein AL468_04715 PF12704 MacB-like periplasmic core domain AL468_04715 PF02687 FtsX-like permease family AL468_04720 PF00005 ABC transporter AL468_04725 PF02687 FtsX-like permease family AL468_04725 PF12704 MacB-like periplasmic core domain AL468_04735 PF02559 CarD-like/TRCF domain AL468_04735 PF17757 UvrB interaction domain AL468_04735 PF00270 DEAD/DEAH box helicase AL468_04735 PF00271 Helicase conserved C-terminal domain AL468_04735 PF03461 TRCF domain AL468_04750 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL468_04755 PF05728 Uncharacterised protein family (UPF0227) AL468_04760 PF01636 Phosphotransferase enzyme family AL468_04765 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AL468_04765 PF13036 Peptidoglycan-synthase activator LpoB AL468_04780 PF01230 HIT domain AL468_04785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL468_04785 PF00672 HAMP domain AL468_04795 PF01048 Phosphorylase superfamily AL468_04800 PF00403 Heavy-metal-associated domain AL468_04805 PF00571 CBS domain AL468_04805 PF00478 IMP dehydrogenase / GMP reductase domain AL468_04810 PF00588 SpoU rRNA Methylase family AL468_04810 PF08032 RNA 2'-O ribose methyltransferase substrate binding AL468_04820 PF00072 Response regulator receiver domain AL468_04820 PF00990 Diguanylate cyclase, GGDEF domain AL468_04830 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AL468_04835 PF09619 Type III secretion system lipoprotein chaperone (YscW) AL468_04850 PF01037 Lrp/AsnC ligand binding domain AL468_04850 PF13404 AsnC-type helix-turn-helix domain AL468_04855 PF00291 Pyridoxal-phosphate dependent enzyme AL468_04875 PF00873 AcrB/AcrD/AcrF family AL468_04880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL468_04880 PF00529 HlyD membrane-fusion protein of T1SS AL468_04925 PF07690 Major Facilitator Superfamily AL468_04930 PF03601 Conserved hypothetical protein 698 AL468_04940 PF13193 AMP-binding enzyme C-terminal domain AL468_04940 PF00501 AMP-binding enzyme AL468_04945 PF13378 Enolase C-terminal domain-like AL468_04950 PF00378 Enoyl-CoA hydratase/isomerase AL468_04955 PF12697 Alpha/beta hydrolase family AL468_04960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL468_04960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL468_04960 PF16582 Middle domain of thiamine pyrophosphate AL468_04965 PF00425 chorismate binding enzyme AL468_04970 PF00155 Aminotransferase class I and II AL468_04980 PF01966 HD domain AL468_04980 PF13286 Phosphohydrolase-associated domain AL468_05000 PF13145 PPIC-type PPIASE domain AL468_05005 PF00216 Bacterial DNA-binding protein AL468_05010 PF02190 ATP-dependent protease La (LON) substrate-binding domain AL468_05010 PF00004 ATPase family associated with various cellular activities (AAA) AL468_05010 PF05362 Lon protease (S16) C-terminal proteolytic domain AL468_05015 PF07724 AAA domain (Cdc48 subfamily) AL468_05015 PF10431 C-terminal, D2-small domain, of ClpB protein AL468_05015 PF06689 ClpX C4-type zinc finger AL468_05020 PF00574 Clp protease AL468_05025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL468_05025 PF05698 Bacterial trigger factor protein (TF) C-terminus AL468_05025 PF05697 Bacterial trigger factor protein (TF) AL468_05035 PF02743 Cache domain AL468_05035 PF00512 His Kinase A (phospho-acceptor) domain AL468_05035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_05040 PF00158 Sigma-54 interaction domain AL468_05040 PF02954 Bacterial regulatory protein, Fis family AL468_05040 PF00072 Response regulator receiver domain AL468_05050 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL468_05055 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AL468_05060 PF03480 Bacterial extracellular solute-binding protein, family 7 AL468_05065 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AL468_05080 PF02386 Cation transport protein AL468_05085 PF02254 TrkA-N domain AL468_05085 PF02080 TrkA-C domain AL468_05090 PF00271 Helicase conserved C-terminal domain AL468_05090 PF00270 DEAD/DEAH box helicase AL468_05095 PF00571 CBS domain AL468_05095 PF03471 Transporter associated domain AL468_05095 PF01595 Cyclin M transmembrane N-terminal domain AL468_05105 PF04820 Tryptophan halogenase AL468_05130 PF00550 Phosphopantetheine attachment site AL468_05135 PF00550 Phosphopantetheine attachment site AL468_05145 PF13193 AMP-binding enzyme C-terminal domain AL468_05145 PF00501 AMP-binding enzyme AL468_05145 PF16177 Acetyl-coenzyme A synthetase N-terminus AL468_05150 PF07977 FabA-like domain AL468_05155 PF00535 Glycosyl transferase family 2 AL468_05160 PF00221 Aromatic amino acid lyase AL468_05185 PF00109 Beta-ketoacyl synthase, N-terminal domain AL468_05185 PF02801 Beta-ketoacyl synthase, C-terminal domain AL468_05190 PF07977 FabA-like domain AL468_05200 PF02801 Beta-ketoacyl synthase, C-terminal domain AL468_05200 PF00109 Beta-ketoacyl synthase, N-terminal domain AL468_05265 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AL468_05265 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AL468_05270 PF07670 Nucleoside recognition AL468_05270 PF07662 Na+ dependent nucleoside transporter C-terminus AL468_05270 PF01773 Na+ dependent nucleoside transporter N-terminus AL468_05275 PF03466 LysR substrate binding domain AL468_05275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_05280 PF13406 Transglycosylase SLT domain AL468_05285 PF05166 YcgL domain AL468_05290 PF03775 Septum formation inhibitor MinC, C-terminal domain AL468_05290 PF05209 Septum formation inhibitor MinC, N-terminal domain AL468_05295 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AL468_05300 PF03776 Septum formation topological specificity factor MinE AL468_05305 PF01612 3'-5' exonuclease AL468_05305 PF00570 HRDC domain AL468_05310 PF00501 AMP-binding enzyme AL468_05310 PF13193 AMP-binding enzyme C-terminal domain AL468_05315 PF00561 alpha/beta hydrolase fold AL468_05320 PF03843 Outer membrane lipoprotein Slp family AL468_05330 PF00814 Glycoprotease family AL468_05335 PF13307 Helicase C-terminal domain AL468_05335 PF04851 Type III restriction enzyme, res subunit AL468_05340 PF00551 Formyl transferase AL468_05340 PF01842 ACT domain AL468_05345 PF00089 Trypsin AL468_05355 PF06185 YecM protein AL468_05365 PF03485 Arginyl tRNA synthetase N terminal domain AL468_05365 PF00750 tRNA synthetases class I (R) AL468_05365 PF05746 DALR anticodon binding domain AL468_05380 PF17910 FeoB cytosolic helical domain AL468_05380 PF02421 Ferrous iron transport protein B AL468_05380 PF07670 Nucleoside recognition AL468_05380 PF07664 Ferrous iron transport protein B C terminus AL468_05385 PF04023 FeoA domain AL468_05390 PF02311 AraC-like ligand binding domain AL468_05390 PF12833 Helix-turn-helix domain AL468_05395 PF01297 Zinc-uptake complex component A periplasmic AL468_05400 PF00005 ABC transporter AL468_05405 PF00950 ABC 3 transport family AL468_05410 PF00549 CoA-ligase AL468_05410 PF02629 CoA binding domain AL468_05415 PF00549 CoA-ligase AL468_05415 PF08442 ATP-grasp domain AL468_05420 PF02817 e3 binding domain AL468_05420 PF00364 Biotin-requiring enzyme AL468_05420 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AL468_05425 PF16870 2-oxoglutarate dehydrogenase C-terminal AL468_05425 PF02779 Transketolase, pyrimidine binding domain AL468_05425 PF00676 Dehydrogenase E1 component AL468_05425 PF16078 2-oxoglutarate dehydrogenase N-terminus AL468_05430 PF13085 2Fe-2S iron-sulfur cluster binding domain AL468_05435 PF02910 Fumarate reductase flavoprotein C-term AL468_05435 PF00890 FAD binding domain AL468_05440 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AL468_05445 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AL468_05450 PF00285 Citrate synthase, C-terminal domain AL468_05455 PF01784 NIF3 (NGG1p interacting factor 3) AL468_05465 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL468_05465 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL468_05465 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL468_05465 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL468_05470 PF17206 SeqA protein N-terminal domain AL468_05470 PF03925 SeqA protein C-terminal domain AL468_05475 PF12697 Alpha/beta hydrolase family AL468_05485 PF00258 Flavodoxin AL468_05495 PF01475 Ferric uptake regulator family AL468_05500 PF00749 tRNA synthetases class I (E and Q), catalytic domain AL468_05500 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AL468_05505 PF02378 Phosphotransferase system, EIIC AL468_05505 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AL468_05505 PF00367 phosphotransferase system, EIIB AL468_05515 PF01979 Amidohydrolase family AL468_05520 PF01047 MarR family AL468_05520 PF00480 ROK family AL468_05525 PF00999 Sodium/hydrogen exchanger family AL468_05525 PF02254 TrkA-N domain AL468_05530 PF00733 Asparagine synthase AL468_05530 PF13537 Glutamine amidotransferase domain AL468_05535 PF02357 Transcription termination factor nusG AL468_05540 PF00854 POT family AL468_05545 PF00762 Ferrochelatase AL468_05550 PF05191 Adenylate kinase, active site lid AL468_05555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_05555 PF00183 Hsp90 protein AL468_05560 PF00486 Transcriptional regulatory protein, C terminal AL468_05565 PF17323 Trans-membrane regulatory protein ToxS AL468_05580 PF12850 Calcineurin-like phosphoesterase superfamily domain AL468_05600 PF07556 Protein of unknown function (DUF1538) AL468_05605 PF07556 Protein of unknown function (DUF1538) AL468_05610 PF08338 Domain of unknown function (DUF1731) AL468_05610 PF01370 NAD dependent epimerase/dehydratase family AL468_05615 PF00106 short chain dehydrogenase AL468_05625 PF00085 Thioredoxin AL468_05630 PF01145 SPFH domain / Band 7 family AL468_05630 PF16200 C-terminal region of band_7 AL468_05650 PF03573 outer membrane porin, OprD family AL468_05655 PF01653 NAD-dependent DNA ligase adenylation domain AL468_05655 PF00533 BRCA1 C Terminus (BRCT) domain AL468_05655 PF03120 NAD-dependent DNA ligase OB-fold domain AL468_05655 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AL468_05655 PF12826 Helix-hairpin-helix motif AL468_05660 PF04354 ZipA, C-terminal FtsZ-binding domain AL468_05670 PF00291 Pyridoxal-phosphate dependent enzyme AL468_05680 PF00381 PTS HPr component phosphorylation site AL468_05685 PF00391 PEP-utilising enzyme, mobile domain AL468_05685 PF02896 PEP-utilising enzyme, TIM barrel domain AL468_05685 PF05524 PEP-utilising enzyme, N-terminal AL468_05690 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AL468_05695 PF00669 Bacterial flagellin N-terminal helical region AL468_05695 PF07196 Flagellin hook IN motif AL468_05695 PF00700 Bacterial flagellin C-terminal helical region AL468_05700 PF00700 Bacterial flagellin C-terminal helical region AL468_05700 PF07196 Flagellin hook IN motif AL468_05700 PF00669 Bacterial flagellin N-terminal helical region AL468_05710 PF07196 Flagellin hook IN motif AL468_05710 PF00700 Bacterial flagellin C-terminal helical region AL468_05710 PF00669 Bacterial flagellin N-terminal helical region AL468_05715 PF00669 Bacterial flagellin N-terminal helical region AL468_05720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL468_05720 PF07196 Flagellin hook IN motif AL468_05725 PF10135 Rod binding protein AL468_05725 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AL468_05730 PF02119 Flagellar P-ring protein AL468_05735 PF02107 Flagellar L-ring protein AL468_05740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL468_05740 PF00460 Flagella basal body rod protein AL468_05745 PF00460 Flagella basal body rod protein AL468_05745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL468_05750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL468_05750 PF00460 Flagella basal body rod protein AL468_05750 PF07559 Flagellar basal body protein FlaE AL468_05755 PF13861 FlgD Tudor-like domain AL468_05755 PF13860 FlgD Ig-like domain AL468_05755 PF03963 Flagellar hook capping protein - N-terminal region AL468_05760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL468_05760 PF00460 Flagella basal body rod protein AL468_05765 PF00460 Flagella basal body rod protein AL468_05770 PF01739 CheR methyltransferase, SAM binding domain AL468_05770 PF03705 CheR methyltransferase, all-alpha domain AL468_05775 PF01584 CheW-like domain AL468_05775 PF00072 Response regulator receiver domain AL468_05820 PF00691 OmpA family AL468_05820 PF01389 OmpA-like transmembrane domain AL468_05825 PF00749 tRNA synthetases class I (E and Q), catalytic domain AL468_05830 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AL468_05835 PF13609 Gram-negative porin AL468_05850 PF00403 Heavy-metal-associated domain AL468_05865 PF03173 Putative carbohydrate binding domain AL468_05865 PF02838 Glycosyl hydrolase family 20, domain 2 AL468_05865 PF00728 Glycosyl hydrolase family 20, catalytic domain AL468_05865 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain AL468_05890 PF01713 Smr domain AL468_05895 PF01479 S4 domain AL468_05895 PF00849 RNA pseudouridylate synthase AL468_05900 PF04073 Aminoacyl-tRNA editing domain AL468_05905 PF02872 5'-nucleotidase, C-terminal domain AL468_05905 PF00149 Calcineurin-like phosphoesterase AL468_05910 PF00793 DAHP synthetase I family AL468_05915 PF13369 Transglutaminase-like superfamily AL468_05920 PF04247 Invasion gene expression up-regulator, SirB AL468_05925 PF13847 Methyltransferase domain AL468_05925 PF17827 PrmC N-terminal domain AL468_05930 PF00472 RF-1 domain AL468_05930 PF03462 PCRF domain AL468_05935 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AL468_05935 PF01488 Shikimate / quinate 5-dehydrogenase AL468_05935 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AL468_05940 PF03550 Outer membrane lipoprotein LolB AL468_05945 PF08544 GHMP kinases C terminal AL468_05945 PF00288 GHMP kinases N terminal domain AL468_05950 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AL468_05950 PF14572 Phosphoribosyl synthetase-associated domain AL468_05955 PF01195 Peptidyl-tRNA hydrolase AL468_05960 PF06071 Protein of unknown function (DUF933) AL468_05960 PF01926 50S ribosome-binding GTPase AL468_06070 PF01494 FAD binding domain AL468_06080 PF01938 TRAM domain AL468_06080 PF04055 Radical SAM superfamily AL468_06080 PF00919 Uncharacterized protein family UPF0004 AL468_06085 PF02562 PhoH-like protein AL468_06090 PF02130 Uncharacterized protein family UPF0054 AL468_06095 PF03471 Transporter associated domain AL468_06095 PF00571 CBS domain AL468_06100 PF00795 Carbon-nitrogen hydrolase AL468_06105 PF07295 Zinc-ribbon containing domain AL468_06110 PF08264 Anticodon-binding domain of tRNA AL468_06110 PF13603 Leucyl-tRNA synthetase, Domain 2 AL468_06110 PF00133 tRNA synthetases class I (I, L, M and V) AL468_06115 PF04390 Lipopolysaccharide-assembly AL468_06120 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AL468_06120 PF06144 DNA polymerase III, delta subunit AL468_06130 PF02590 Predicted SPOUT methyltransferase AL468_06135 PF03717 Penicillin-binding Protein dimerisation domain AL468_06135 PF00905 Penicillin binding protein transpeptidase domain AL468_06140 PF01098 Cell cycle protein AL468_06145 PF03330 Lytic transglycolase AL468_06145 PF05036 Sporulation related domain AL468_06150 PF00768 D-alanyl-D-alanine carboxypeptidase AL468_06150 PF07943 Penicillin-binding protein 5, C-terminal domain AL468_06155 PF04359 Protein of unknown function (DUF493) AL468_06160 PF03099 Biotin/lipoate A/B protein ligase family AL468_06165 PF04055 Radical SAM superfamily AL468_06165 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AL468_06170 PF00464 Serine hydroxymethyltransferase AL468_06175 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AL468_06175 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AL468_06190 PF16657 Maltogenic Amylase, C-terminal domain AL468_06190 PF00128 Alpha amylase, catalytic domain AL468_06195 PF02378 Phosphotransferase system, EIIC AL468_06195 PF00367 phosphotransferase system, EIIB AL468_06200 PF00356 Bacterial regulatory proteins, lacI family AL468_06210 PF00005 ABC transporter AL468_06210 PF09383 NIL domain AL468_06215 PF00528 Binding-protein-dependent transport system inner membrane component AL468_06220 PF03180 NLPA lipoprotein AL468_06225 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) AL468_06230 PF07348 Syd protein (SUKH-2) AL468_06235 PF14489 QueF-like protein AL468_06235 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AL468_06245 PF00072 Response regulator receiver domain AL468_06245 PF00990 Diguanylate cyclase, GGDEF domain AL468_06250 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AL468_06250 PF11892 Domain of unknown function (DUF3412) AL468_06250 PF03641 Possible lysine decarboxylase AL468_06255 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AL468_06255 PF01367 5'-3' exonuclease, C-terminal SAM fold AL468_06260 PF18125 RlmM ferredoxin-like domain AL468_06260 PF01728 FtsJ-like methyltransferase AL468_06265 PF04241 Protein of unknown function (DUF423) AL468_06275 PF03466 LysR substrate binding domain AL468_06275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_06280 PF02568 Thiamine biosynthesis protein (ThiI) AL468_06280 PF02926 THUMP domain AL468_06285 PF00691 OmpA family AL468_06285 PF13677 Membrane MotB of proton-channel complex MotA/MotB AL468_06290 PF01618 MotA/TolQ/ExbB proton channel family AL468_06295 PF02609 Exonuclease VII small subunit AL468_06300 PF00348 Polyprenyl synthetase AL468_06305 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AL468_06305 PF02780 Transketolase, C-terminal domain AL468_06305 PF02779 Transketolase, pyrimidine binding domain AL468_06310 PF04608 Phosphatidylglycerophosphatase A AL468_06315 PF02769 AIR synthase related protein, C-terminal domain AL468_06315 PF00586 AIR synthase related protein, N-terminal domain AL468_06320 PF01029 NusB family AL468_06325 PF00885 6,7-dimethyl-8-ribityllumazine synthase AL468_06330 PF00925 GTP cyclohydrolase II AL468_06330 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AL468_06335 PF00677 Lumazine binding domain AL468_06340 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AL468_06340 PF01872 RibD C-terminal domain AL468_06345 PF03477 ATP cone domain AL468_06350 PF00171 Aldehyde dehydrogenase family AL468_06355 PF01472 PUA domain AL468_06355 PF00696 Amino acid kinase family AL468_06360 PF07417 Sigma factor-binding transcriptional regulator Crl AL468_06370 PF00156 Phosphoribosyl transferase domain AL468_06380 PF00860 Permease family AL468_06385 PF01546 Peptidase family M20/M25/M40 AL468_06385 PF07687 Peptidase dimerisation domain AL468_06400 PF07715 TonB-dependent Receptor Plug Domain AL468_06400 PF00593 TonB dependent receptor AL468_06415 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AL468_06415 PF02769 AIR synthase related protein, C-terminal domain AL468_06415 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AL468_06420 PF01464 Transglycosylase SLT domain AL468_06420 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL468_06430 PF14437 MafB19-like deaminase AL468_06435 PF03806 AbgT putative transporter family AL468_06460 PF07963 Prokaryotic N-terminal methylation motif AL468_06460 PF00114 Pilin (bacterial filament) AL468_06465 PF07963 Prokaryotic N-terminal methylation motif AL468_06465 PF00114 Pilin (bacterial filament) AL468_06470 PF00226 DnaJ domain AL468_06470 PF00684 DnaJ central domain AL468_06470 PF01556 DnaJ C terminal domain AL468_06475 PF00012 Hsp70 protein AL468_06480 PF00375 Sodium:dicarboxylate symporter family AL468_06485 PF01025 GrpE AL468_06490 PF01513 ATP-NAD kinase AL468_06500 PF02463 RecF/RecN/SMC N terminal domain AL468_06505 PF04355 SmpA / OmlA family AL468_06510 PF03658 RnfH family Ubiquitin AL468_06515 PF03364 Polyketide cyclase / dehydrase and lipid transport AL468_06520 PF01668 SmpB protein AL468_06535 PF03466 LysR substrate binding domain AL468_06535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_06540 PF00795 Carbon-nitrogen hydrolase AL468_06540 PF00583 Acetyltransferase (GNAT) family AL468_06560 PF00202 Aminotransferase class-III AL468_06565 PF01053 Cys/Met metabolism PLP-dependent enzyme AL468_06570 PF07969 Amidohydrolase family AL468_06585 PF01266 FAD dependent oxidoreductase AL468_06590 PF01235 Sodium:alanine symporter family AL468_06595 PF01184 GPR1/FUN34/yaaH family AL468_06600 PF00704 Glycosyl hydrolases family 18 AL468_06600 PF06483 Chitinase C AL468_06605 PF03553 Na+/H+ antiporter family AL468_06685 PF00589 Phage integrase family AL468_06685 PF13356 Arm DNA-binding domain AL468_06690 PF02540 NAD synthase AL468_06690 PF00117 Glutamine amidotransferase class-I AL468_06690 PF00958 GMP synthase C terminal domain AL468_06695 PF00478 IMP dehydrogenase / GMP reductase domain AL468_06695 PF00571 CBS domain AL468_06700 PF02601 Exonuclease VII, large subunit AL468_06700 PF13742 OB-fold nucleic acid binding domain AL468_06715 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AL468_06715 PF01926 50S ribosome-binding GTPase AL468_06720 PF13360 PQQ-like domain AL468_06725 PF09976 Tetratricopeptide repeat-like domain AL468_06730 PF03129 Anticodon binding domain AL468_06730 PF13393 Histidyl-tRNA synthetase AL468_06735 PF04551 GcpE protein AL468_06740 PF13464 Domain of unknown function (DUF4115) AL468_06750 PF04055 Radical SAM superfamily AL468_06755 PF00334 Nucleoside diphosphate kinase AL468_06760 PF00883 Cytosol aminopeptidase family, catalytic domain AL468_06760 PF12404 Peptidase AL468_06765 PF04384 Iron-sulphur cluster assembly AL468_06770 PF00111 2Fe-2S iron-sulfur cluster binding domain AL468_06775 PF00012 Hsp70 protein AL468_06780 PF07743 HSCB C-terminal oligomerisation domain AL468_06780 PF00226 DnaJ domain AL468_06785 PF01521 Iron-sulphur cluster biosynthesis AL468_06790 PF01592 NifU-like N terminal domain AL468_06795 PF00266 Aminotransferase class-V AL468_06800 PF02082 Transcriptional regulator AL468_06805 PF00588 SpoU rRNA Methylase family AL468_06810 PF00459 Inositol monophosphatase family AL468_06815 PF02355 Protein export membrane protein AL468_06815 PF07549 SecD/SecF GG Motif AL468_06820 PF13721 SecD export protein N-terminal TM region AL468_06820 PF02355 Protein export membrane protein AL468_06820 PF07549 SecD/SecF GG Motif AL468_06825 PF02699 Preprotein translocase subunit AL468_06830 PF01702 Queuine tRNA-ribosyltransferase AL468_06835 PF02547 Queuosine biosynthesis protein AL468_06850 PF00571 CBS domain AL468_06855 PF00463 Isocitrate lyase family AL468_06860 PF01274 Malate synthase AL468_06865 PF03466 LysR substrate binding domain AL468_06865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_06870 PF00578 AhpC/TSA family AL468_06870 PF10417 C-terminal domain of 1-Cys peroxiredoxin AL468_06875 PF03932 CutC family AL468_06880 PF03976 Polyphosphate kinase 2 (PPK2) AL468_06885 PF01895 PhoU domain AL468_06890 PF00005 ABC transporter AL468_06895 PF00528 Binding-protein-dependent transport system inner membrane component AL468_06900 PF00528 Binding-protein-dependent transport system inner membrane component AL468_06905 PF13089 Polyphosphate kinase N-terminal domain AL468_06905 PF02503 Polyphosphate kinase middle domain AL468_06905 PF13090 Polyphosphate kinase C-terminal domain 2 AL468_06905 PF17941 Polyphosphate kinase C-terminal domain 1 AL468_06910 PF02541 Ppx/GppA phosphatase family AL468_06915 PF12849 PBP superfamily domain AL468_06920 PF00512 His Kinase A (phospho-acceptor) domain AL468_06920 PF00989 PAS fold AL468_06920 PF11808 Phosphate regulon sensor protein PhoR AL468_06920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_06925 PF00486 Transcriptional regulatory protein, C terminal AL468_06925 PF00072 Response regulator receiver domain AL468_06935 PF04381 Putative exonuclease, RdgC AL468_06945 PF00037 4Fe-4S binding domain AL468_06955 PF03411 Penicillin-insensitive murein endopeptidase AL468_07005 PF00004 ATPase family associated with various cellular activities (AAA) AL468_07005 PF07724 AAA domain (Cdc48 subfamily) AL468_07005 PF17871 AAA lid domain AL468_07005 PF02861 Clp amino terminal domain, pathogenicity island component AL468_07005 PF10431 C-terminal, D2-small domain, of ClpB protein AL468_07015 PF00849 RNA pseudouridylate synthase AL468_07015 PF01479 S4 domain AL468_07020 PF13525 Outer membrane lipoprotein AL468_07025 PF01464 Transglycosylase SLT domain AL468_07025 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL468_07030 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AL468_07035 PF01817 Chorismate mutase type II AL468_07035 PF00800 Prephenate dehydratase AL468_07040 PF01931 Protein of unknown function DUF84 AL468_07045 PF01371 Trp repressor protein AL468_07050 PF01464 Transglycosylase SLT domain AL468_07050 PF14718 Soluble lytic murein transglycosylase L domain AL468_07055 PF12848 ABC transporter AL468_07055 PF00005 ABC transporter AL468_07060 PF07238 PilZ domain AL468_07065 PF01464 Transglycosylase SLT domain AL468_07065 PF10145 Phage-related minor tail protein AL468_07065 PF01551 Peptidase family M23 AL468_07070 PF01817 Chorismate mutase type II AL468_07070 PF02153 Prephenate dehydrogenase AL468_07075 PF00793 DAHP synthetase I family AL468_07080 PF00933 Glycosyl hydrolase family 3 N terminal domain AL468_07085 PF03702 Anhydro-N-acetylmuramic acid kinase AL468_07090 PF01380 SIS domain AL468_07105 PF02554 Carbon starvation protein CstA AL468_07110 PF06580 Histidine kinase AL468_07110 PF07694 5TMR of 5TMR-LYT AL468_07115 PF04397 LytTr DNA-binding domain AL468_07115 PF00072 Response regulator receiver domain AL468_07125 PF02401 LytB protein AL468_07130 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL468_07135 PF01252 Signal peptidase (SPase) II AL468_07140 PF06827 Zinc finger found in FPG and IleRS AL468_07140 PF00133 tRNA synthetases class I (I, L, M and V) AL468_07140 PF08264 Anticodon-binding domain of tRNA AL468_07145 PF06574 FAD synthetase AL468_07145 PF01687 Riboflavin kinase AL468_07150 PF03023 Lipid II flippase MurJ AL468_07155 PF01649 Ribosomal protein S20 AL468_07160 PF01022 Bacterial regulatory protein, arsR family AL468_07165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_07165 PF03466 LysR substrate binding domain AL468_07170 PF02690 Na+/Pi-cotransporter AL468_07180 PF00303 Thymidylate synthase AL468_07190 PF01925 Sulfite exporter TauE/SafE AL468_07195 PF02896 PEP-utilising enzyme, TIM barrel domain AL468_07195 PF00391 PEP-utilising enzyme, mobile domain AL468_07195 PF05524 PEP-utilising enzyme, N-terminal AL468_07195 PF01590 GAF domain AL468_07200 PF00293 NUDIX domain AL468_07205 PF02976 DNA mismatch repair enzyme MutH AL468_07215 PF00248 Aldo/keto reductase family AL468_07225 PF00072 Response regulator receiver domain AL468_07225 PF00158 Sigma-54 interaction domain AL468_07225 PF02954 Bacterial regulatory protein, Fis family AL468_07230 PF00152 tRNA synthetases class II (D, K and N) AL468_07230 PF01336 OB-fold nucleic acid binding domain AL468_07240 PF17768 RecJ OB domain AL468_07240 PF02272 DHHA1 domain AL468_07240 PF01368 DHH family AL468_07245 PF10411 Disulfide bond isomerase protein N-terminus AL468_07245 PF13098 Thioredoxin-like domain AL468_07250 PF00589 Phage integrase family AL468_07250 PF02899 Phage integrase, N-terminal SAM-like domain AL468_07255 PF00258 Flavodoxin AL468_07260 PF05525 Branched-chain amino acid transport protein AL468_07265 PF05175 Methyltransferase small domain AL468_07270 PF00270 DEAD/DEAH box helicase AL468_07270 PF00271 Helicase conserved C-terminal domain AL468_07275 PF03883 Peroxide stress protein YaaA AL468_07280 PF01235 Sodium:alanine symporter family AL468_07295 PF03167 Uracil DNA glycosylase superfamily AL468_07305 PF01261 Xylose isomerase-like TIM barrel AL468_07310 PF01228 Glycine radical AL468_07315 PF03358 NADPH-dependent FMN reductase AL468_07320 PF14821 Threonine synthase N terminus AL468_07320 PF00291 Pyridoxal-phosphate dependent enzyme AL468_07325 PF08544 GHMP kinases C terminal AL468_07325 PF00288 GHMP kinases N terminal domain AL468_07330 PF13840 ACT domain AL468_07330 PF00696 Amino acid kinase family AL468_07330 PF01842 ACT domain AL468_07330 PF03447 Homoserine dehydrogenase, NAD binding domain AL468_07330 PF00742 Homoserine dehydrogenase AL468_07345 PF03737 Aldolase/RraA AL468_07360 PF00072 Response regulator receiver domain AL468_07360 PF00486 Transcriptional regulatory protein, C terminal AL468_07370 PF01627 Hpt domain AL468_07370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_07370 PF18415 Histidine kinase receptor ArcB trans-membrane domain AL468_07370 PF00989 PAS fold AL468_07370 PF00512 His Kinase A (phospho-acceptor) domain AL468_07370 PF00072 Response regulator receiver domain AL468_07375 PF00563 EAL domain AL468_07375 PF01590 GAF domain AL468_07375 PF00990 Diguanylate cyclase, GGDEF domain AL468_07375 PF00360 Phytochrome region AL468_07380 PF16199 Radical_SAM C-terminal domain AL468_07380 PF04055 Radical SAM superfamily AL468_07385 PF01493 GXGXG motif AL468_07385 PF01645 Conserved region in glutamate synthase AL468_07385 PF04898 Glutamate synthase central domain AL468_07385 PF00310 Glutamine amidotransferases class-II AL468_07390 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AL468_07390 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL468_07400 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AL468_07400 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL468_07410 PF01048 Phosphorylase superfamily AL468_07415 PF17113 Regulatory signalling modulator protein AmpE AL468_07415 PF03186 CobD/Cbib protein AL468_07420 PF01497 Periplasmic binding protein AL468_07425 PF03458 UPF0126 domain AL468_07430 PF03466 LysR substrate binding domain AL468_07430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_07445 PF01925 Sulfite exporter TauE/SafE AL468_07465 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AL468_07465 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AL468_07465 PF02142 MGS-like domain AL468_07470 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AL468_07470 PF00117 Glutamine amidotransferase class-I AL468_07475 PF05173 Dihydrodipicolinate reductase, C-terminus AL468_07475 PF01113 Dihydrodipicolinate reductase, N-terminus AL468_07480 PF00293 NUDIX domain AL468_07485 PF01043 SecA preprotein cross-linking domain AL468_07485 PF07517 SecA DEAD-like domain AL468_07485 PF02810 SEC-C motif AL468_07485 PF07516 SecA Wing and Scaffold domain AL468_07495 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AL468_07500 PF12327 FtsZ family, C-terminal domain AL468_07500 PF00091 Tubulin/FtsZ family, GTPase domain AL468_07505 PF02491 SHS2 domain inserted in FTSA AL468_07510 PF03799 Cell division protein FtsQ AL468_07510 PF08478 POTRA domain, FtsQ-type AL468_07515 PF02875 Mur ligase family, glutamate ligase domain AL468_07515 PF08245 Mur ligase middle domain AL468_07515 PF01225 Mur ligase family, catalytic domain AL468_07520 PF03033 Glycosyltransferase family 28 N-terminal domain AL468_07520 PF04101 Glycosyltransferase family 28 C-terminal domain AL468_07525 PF01098 Cell cycle protein AL468_07530 PF02875 Mur ligase family, glutamate ligase domain AL468_07530 PF08245 Mur ligase middle domain AL468_07535 PF00953 Glycosyl transferase family 4 AL468_07535 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AL468_07540 PF01225 Mur ligase family, catalytic domain AL468_07540 PF02875 Mur ligase family, glutamate ligase domain AL468_07540 PF08245 Mur ligase middle domain AL468_07545 PF08245 Mur ligase middle domain AL468_07545 PF02875 Mur ligase family, glutamate ligase domain AL468_07545 PF01225 Mur ligase family, catalytic domain AL468_07550 PF00905 Penicillin binding protein transpeptidase domain AL468_07550 PF03717 Penicillin-binding Protein dimerisation domain AL468_07555 PF04999 Cell division protein FtsL AL468_07560 PF01795 MraW methylase family AL468_07570 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL468_07575 PF04348 LppC putative lipoprotein AL468_07580 PF02021 Uncharacterised protein family UPF0102 AL468_07585 PF13580 SIS domain AL468_07590 PF04972 BON domain AL468_07595 PF04386 Stringent starvation protein B AL468_07600 PF02798 Glutathione S-transferase, N-terminal domain AL468_07600 PF00043 Glutathione S-transferase, C-terminal domain AL468_07605 PF02167 Cytochrome C1 family AL468_07610 PF00033 Cytochrome b/b6/petB AL468_07610 PF00032 Cytochrome b(C-terminal)/b6/petD AL468_07615 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AL468_07615 PF00355 Rieske [2Fe-2S] domain AL468_07620 PF00380 Ribosomal protein S9/S16 AL468_07625 PF00572 Ribosomal protein L13 AL468_07635 PF03969 AFG1-like ATPase AL468_07645 PF06295 Protein of unknown function (DUF1043) AL468_07650 PF00595 PDZ domain AL468_07655 PF13180 PDZ domain AL468_07660 PF03989 DNA gyrase C-terminal domain, beta-propeller AL468_07660 PF00521 DNA gyrase/topoisomerase IV, subunit A AL468_07665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_07665 PF00204 DNA gyrase B AL468_07665 PF00986 DNA gyrase B subunit, carboxyl terminus AL468_07665 PF01751 Toprim domain AL468_07670 PF05728 Uncharacterised protein family (UPF0227) AL468_07675 PF00149 Calcineurin-like phosphoesterase AL468_07680 PF06853 Protein of unknown function (DUF1249) AL468_07685 PF00293 NUDIX domain AL468_07690 PF02321 Outer membrane efflux protein AL468_07695 PF01467 Cytidylyltransferase-like AL468_07695 PF00294 pfkB family carbohydrate kinase AL468_07700 PF08335 GlnD PII-uridylyltransferase AL468_07700 PF03710 Glutamate-ammonia ligase adenylyltransferase AL468_07705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL468_07705 PF00672 HAMP domain AL468_07705 PF02743 Cache domain AL468_07715 PF01928 CYTH domain AL468_07720 PF01865 Protein of unknown function DUF47 AL468_07725 PF01384 Phosphate transporter family AL468_07730 PF08239 Bacterial SH3 domain AL468_07745 PF01471 Putative peptidoglycan binding domain AL468_07745 PF13401 AAA domain AL468_07750 PF01743 Poly A polymerase head domain AL468_07750 PF12627 Probable RNA and SrmB- binding site of polymerase A AL468_07750 PF01966 HD domain AL468_07755 PF02673 Bacitracin resistance protein BacA AL468_07760 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AL468_07765 PF02152 Dihydroneopterin aldolase AL468_07770 PF02660 Glycerol-3-phosphate acyltransferase AL468_07775 PF00561 alpha/beta hydrolase fold AL468_07780 PF00814 Glycoprotease family AL468_07785 PF01165 Ribosomal protein S21 AL468_07790 PF09424 Yqey-like protein AL468_07795 PF08275 DNA primase catalytic core, N-terminal domain AL468_07795 PF01807 CHC2 zinc finger AL468_07795 PF08278 DNA primase DnaG DnaB-binding AL468_07795 PF10410 DnaB-helicase binding domain of primase AL468_07800 PF03979 Sigma-70 factor, region 1.1 AL468_07800 PF04545 Sigma-70, region 4 AL468_07800 PF04539 Sigma-70 region 3 AL468_07800 PF04542 Sigma-70 region 2 AL468_07800 PF00140 Sigma-70 factor, region 1.2 AL468_07800 PF04546 Sigma-70, non-essential region AL468_07810 PF03180 NLPA lipoprotein AL468_07845 PF02378 Phosphotransferase system, EIIC AL468_07845 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL468_07845 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL468_07850 PF08125 Mannitol dehydrogenase C-terminal domain AL468_07850 PF01232 Mannitol dehydrogenase Rossmann domain AL468_07855 PF05068 Mannitol repressor AL468_07860 PF02954 Bacterial regulatory protein, Fis family AL468_07860 PF00158 Sigma-54 interaction domain AL468_07860 PF00989 PAS fold AL468_07865 PF02896 PEP-utilising enzyme, TIM barrel domain AL468_07865 PF00391 PEP-utilising enzyme, mobile domain AL468_07865 PF05524 PEP-utilising enzyme, N-terminal AL468_07870 PF02734 DAK2 domain AL468_07875 PF02733 Dak1 domain AL468_07880 PF00465 Iron-containing alcohol dehydrogenase AL468_07885 PF00672 HAMP domain AL468_07885 PF00512 His Kinase A (phospho-acceptor) domain AL468_07885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_07890 PF00072 Response regulator receiver domain AL468_07890 PF00486 Transcriptional regulatory protein, C terminal AL468_07900 PF01380 SIS domain AL468_07905 PF08220 DeoR-like helix-turn-helix domain AL468_07905 PF00455 DeoR C terminal sensor domain AL468_07915 PF00224 Pyruvate kinase, barrel domain AL468_07915 PF02887 Pyruvate kinase, alpha/beta domain AL468_07925 PF07694 5TMR of 5TMR-LYT AL468_07925 PF00990 Diguanylate cyclase, GGDEF domain AL468_07930 PF10369 Small subunit of acetolactate synthase AL468_07935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL468_07935 PF00205 Thiamine pyrophosphate enzyme, central domain AL468_07935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL468_07940 PF00501 AMP-binding enzyme AL468_07945 PF03466 LysR substrate binding domain AL468_07945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_07955 PF01569 PAP2 superfamily AL468_07970 PF08502 LeuA allosteric (dimerisation) domain AL468_07970 PF00682 HMGL-like AL468_07975 PF00180 Isocitrate/isopropylmalate dehydrogenase AL468_07980 PF00330 Aconitase family (aconitate hydratase) AL468_07985 PF00694 Aconitase C-terminal domain AL468_07995 PF05099 Tellurite resistance protein TerB AL468_07995 PF00226 DnaJ domain AL468_08000 PF04453 LPS transport system D AL468_08000 PF03968 OstA-like protein AL468_08005 PF09312 SurA N-terminal domain AL468_08010 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AL468_08015 PF00398 Ribosomal RNA adenine dimethylase AL468_08020 PF04379 ApaG domain AL468_08025 PF00149 Calcineurin-like phosphoesterase AL468_08030 PF00186 Dihydrofolate reductase AL468_08035 PF12821 Threonine/Serine exporter, ThrE AL468_08040 PF06738 Putative threonine/serine exporter AL468_08045 PF01926 50S ribosome-binding GTPase AL468_08045 PF01018 GTP1/OBG AL468_08050 PF01016 Ribosomal L27 protein AL468_08055 PF00829 Ribosomal prokaryotic L21 protein AL468_08060 PF00348 Polyprenyl synthetase AL468_08070 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AL468_08070 PF00056 lactate/malate dehydrogenase, NAD binding domain AL468_08075 PF01316 Arginine repressor, DNA binding domain AL468_08075 PF02863 Arginine repressor, C-terminal domain AL468_08085 PF16868 NMT1-like family AL468_08105 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL468_08110 PF03466 LysR substrate binding domain AL468_08110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_08115 PF00005 ABC transporter AL468_08120 PF00528 Binding-protein-dependent transport system inner membrane component AL468_08130 PF02441 Flavoprotein AL468_08135 PF01225 Mur ligase family, catalytic domain AL468_08135 PF02875 Mur ligase family, glutamate ligase domain AL468_08135 PF08245 Mur ligase middle domain AL468_08145 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AL468_08150 PF00719 Inorganic pyrophosphatase AL468_08160 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like AL468_08165 PF04357 TamB, inner membrane protein subunit of TAM complex AL468_08170 PF01103 Surface antigen AL468_08170 PF17243 POTRA domain TamA domain 1 AL468_08175 PF01625 Peptide methionine sulfoxide reductase AL468_08180 PF06526 Protein of unknown function (DUF1107) AL468_08185 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AL468_08190 PF10795 Protein of unknown function (DUF2607) AL468_08200 PF00005 ABC transporter AL468_08225 PF03600 Citrate transporter AL468_08225 PF02080 TrkA-C domain AL468_08230 PF00009 Elongation factor Tu GTP binding domain AL468_08235 PF01507 Phosphoadenosine phosphosulfate reductase family AL468_08240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL468_08240 PF10414 Sirohaem synthase dimerisation region AL468_08240 PF14824 Sirohaem biosynthesis protein central AL468_08245 PF00149 Calcineurin-like phosphoesterase AL468_08245 PF02872 5'-nucleotidase, C-terminal domain AL468_08255 PF03880 DbpA RNA binding domain AL468_08255 PF00270 DEAD/DEAH box helicase AL468_08255 PF00271 Helicase conserved C-terminal domain AL468_08260 PF13673 Acetyltransferase (GNAT) domain AL468_08270 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AL468_08270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL468_08280 PF01196 Ribosomal protein L17 AL468_08285 PF01000 RNA polymerase Rpb3/RpoA insert domain AL468_08285 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AL468_08285 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AL468_08290 PF00163 Ribosomal protein S4/S9 N-terminal domain AL468_08290 PF01479 S4 domain AL468_08295 PF00411 Ribosomal protein S11 AL468_08300 PF00416 Ribosomal protein S13/S18 AL468_08305 PF00444 Ribosomal protein L36 AL468_08310 PF00344 SecY translocase AL468_08320 PF00327 Ribosomal protein L30p/L7e AL468_08325 PF03719 Ribosomal protein S5, C-terminal domain AL468_08325 PF00333 Ribosomal protein S5, N-terminal domain AL468_08330 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AL468_08335 PF00347 Ribosomal protein L6 AL468_08340 PF00410 Ribosomal protein S8 AL468_08345 PF00253 Ribosomal protein S14p/S29e AL468_08350 PF00673 ribosomal L5P family C-terminus AL468_08350 PF00281 Ribosomal protein L5 AL468_08355 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AL468_08355 PF00467 KOW motif AL468_08360 PF00238 Ribosomal protein L14p/L23e AL468_08365 PF00366 Ribosomal protein S17 AL468_08370 PF00831 Ribosomal L29 protein AL468_08375 PF00252 Ribosomal protein L16p/L10e AL468_08380 PF00189 Ribosomal protein S3, C-terminal domain AL468_08380 PF07650 KH domain AL468_08385 PF00237 Ribosomal protein L22p/L17e AL468_08390 PF00203 Ribosomal protein S19 AL468_08395 PF03947 Ribosomal Proteins L2, C-terminal domain AL468_08395 PF00181 Ribosomal Proteins L2, RNA binding domain AL468_08400 PF00276 Ribosomal protein L23 AL468_08405 PF00573 Ribosomal protein L4/L1 family AL468_08410 PF00297 Ribosomal protein L3 AL468_08415 PF00338 Ribosomal protein S10p/S20e AL468_08420 PF01197 Ribosomal protein L31 AL468_08430 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AL468_08430 PF00270 DEAD/DEAH box helicase AL468_08430 PF17764 3′ DNA-binding domain (3′BD) AL468_08430 PF00271 Helicase conserved C-terminal domain AL468_08430 PF18074 Primosomal protein N C-terminal domain AL468_08435 PF00356 Bacterial regulatory proteins, lacI family AL468_08445 PF00227 Proteasome subunit AL468_08450 PF00004 ATPase family associated with various cellular activities (AAA) AL468_08450 PF07724 AAA domain (Cdc48 subfamily) AL468_08455 PF01040 UbiA prenyltransferase family AL468_08460 PF03737 Aldolase/RraA AL468_08465 PF06005 Cell division protein ZapB AL468_08475 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AL468_08480 PF00455 DeoR C terminal sensor domain AL468_08480 PF08220 DeoR-like helix-turn-helix domain AL468_08505 PF00121 Triosephosphate isomerase AL468_08510 PF00483 Nucleotidyl transferase AL468_08515 PF01370 NAD dependent epimerase/dehydratase family AL468_08520 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AL468_08520 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AL468_08520 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AL468_08530 PF00535 Glycosyl transferase family 2 AL468_08545 PF00535 Glycosyl transferase family 2 AL468_08565 PF00953 Glycosyl transferase family 4 AL468_08575 PF02397 Bacterial sugar transferase AL468_08580 PF00535 Glycosyl transferase family 2 AL468_08585 PF01501 Glycosyl transferase family 8 AL468_08585 PF00535 Glycosyl transferase family 2 AL468_08615 PF02563 Polysaccharide biosynthesis/export protein AL468_08615 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AL468_08615 PF10531 SLBB domain AL468_08630 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF AL468_08640 PF06082 Exopolysaccharide biosynthesis protein YbjH AL468_08645 PF01370 NAD dependent epimerase/dehydratase family AL468_08650 PF03279 Bacterial lipid A biosynthesis acyltransferase AL468_08660 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AL468_08665 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AL468_08670 PF07836 DmpG-like communication domain AL468_08670 PF00682 HMGL-like AL468_08695 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AL468_08705 PF05523 WxcM-like, C-terminal AL468_08710 PF00483 Nucleotidyl transferase AL468_08715 PF16363 GDP-mannose 4,6 dehydratase AL468_08725 PF01219 Prokaryotic diacylglycerol kinase AL468_08730 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AL468_08735 PF00535 Glycosyl transferase family 2 AL468_08740 PF00535 Glycosyl transferase family 2 AL468_08745 PF05686 Glycosyl transferase family 90 AL468_08750 PF01467 Cytidylyltransferase-like AL468_08755 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AL468_08755 PF06827 Zinc finger found in FPG and IleRS AL468_08755 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AL468_08765 PF00471 Ribosomal protein L33 AL468_08770 PF00830 Ribosomal L28 family AL468_08775 PF04002 RadC-like JAB domain AL468_08780 PF17200 Single Cache domain 2 AL468_08780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL468_08780 PF00672 HAMP domain AL468_08790 PF02441 Flavoprotein AL468_08790 PF04127 DNA / pantothenate metabolism flavoprotein AL468_08795 PF00440 Bacterial regulatory proteins, tetR family AL468_08800 PF03279 Bacterial lipid A biosynthesis acyltransferase AL468_08810 PF03725 3' exoribonuclease family, domain 2 AL468_08810 PF01138 3' exoribonuclease family, domain 1 AL468_08820 PF03755 YicC-like family, N-terminal region AL468_08820 PF08340 Domain of unknown function (DUF1732) AL468_08835 PF02423 Ornithine cyclodeaminase/mu-crystallin family AL468_08855 PF00005 ABC transporter AL468_08855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL468_08860 PF00005 ABC transporter AL468_08860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL468_08865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL468_08870 PF12911 N-terminal TM domain of oligopeptide transport permease C AL468_08870 PF00528 Binding-protein-dependent transport system inner membrane component AL468_08875 PF00528 Binding-protein-dependent transport system inner membrane component AL468_08885 PF07715 TonB-dependent Receptor Plug Domain AL468_08885 PF00593 TonB dependent receptor AL468_08900 PF01618 MotA/TolQ/ExbB proton channel family AL468_08905 PF02472 Biopolymer transport protein ExbD/TolR AL468_08920 PF00625 Guanylate kinase AL468_08925 PF01192 RNA polymerase Rpb6 AL468_08930 PF04607 Region found in RelA / SpoT proteins AL468_08930 PF13291 ACT domain AL468_08930 PF02824 TGS domain AL468_08935 PF00588 SpoU rRNA Methylase family AL468_08935 PF12105 SpoU, rRNA methylase, C-terminal AL468_08940 PF17191 RecG wedge domain AL468_08940 PF00271 Helicase conserved C-terminal domain AL468_08940 PF00270 DEAD/DEAH box helicase AL468_08945 PF00860 Permease family AL468_08950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_08950 PF00672 HAMP domain AL468_08950 PF00512 His Kinase A (phospho-acceptor) domain AL468_08955 PF00486 Transcriptional regulatory protein, C terminal AL468_08955 PF00072 Response regulator receiver domain AL468_08965 PF03449 Transcription elongation factor, N-terminal AL468_08965 PF01272 Transcription elongation factor, GreA/GreB, C-term AL468_08975 PF17674 HHH domain AL468_08975 PF16921 Tex protein YqgF-like domain AL468_08975 PF09371 Tex-like protein N-terminal domain AL468_08975 PF00575 S1 RNA binding domain AL468_08985 PF00561 alpha/beta hydrolase fold AL468_08990 PF00156 Phosphoribosyl transferase domain AL468_08995 PF01521 Iron-sulphur cluster biosynthesis AL468_08995 PF01106 NifU-like domain AL468_09000 PF00293 NUDIX domain AL468_09005 PF00459 Inositol monophosphatase family AL468_09010 PF01203 Type II secretion system (T2SS), protein N AL468_09015 PF04612 Type II secretion system (T2SS), protein M AL468_09020 PF05134 Type II secretion system (T2SS), protein L AL468_09020 PF12693 GspL periplasmic domain AL468_09025 PF03934 Type II secretion system (T2SS), protein K AL468_09030 PF11612 Type II secretion system (T2SS), protein J AL468_09030 PF07963 Prokaryotic N-terminal methylation motif AL468_09035 PF02501 Type II secretion system (T2SS), protein I AL468_09035 PF07963 Prokaryotic N-terminal methylation motif AL468_09040 PF12019 Type II transport protein GspH AL468_09045 PF07963 Prokaryotic N-terminal methylation motif AL468_09045 PF08334 Type II secretion system (T2SS), protein G AL468_09050 PF00482 Type II secretion system (T2SS), protein F AL468_09055 PF00437 Type II/IV secretion system protein AL468_09060 PF03958 Bacterial type II/III secretion system short domain AL468_09060 PF00263 Bacterial type II and III secretion system protein AL468_09065 PF11356 Type II secretion system protein C AL468_09070 PF01479 S4 domain AL468_09075 PF01430 Hsp33 protein AL468_09080 PF01293 Phosphoenolpyruvate carboxykinase AL468_09090 PF00583 Acetyltransferase (GNAT) family AL468_09090 PF09500 Putative thioesterase (yiiD_Cterm) AL468_09095 PF02580 D-Tyr-tRNA(Tyr) deacylase AL468_09100 PF03631 Virulence factor BrkB AL468_09125 PF00120 Glutamine synthetase, catalytic domain AL468_09125 PF03951 Glutamine synthetase, beta-Grasp domain AL468_09135 PF00989 PAS fold AL468_09135 PF00512 His Kinase A (phospho-acceptor) domain AL468_09135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_09140 PF00072 Response regulator receiver domain AL468_09140 PF02954 Bacterial regulatory protein, Fis family AL468_09140 PF00158 Sigma-54 interaction domain AL468_09145 PF03707 Bacterial signalling protein N terminal repeat AL468_09145 PF00990 Diguanylate cyclase, GGDEF domain AL468_09145 PF00563 EAL domain AL468_09150 PF00962 Adenosine/AMP deaminase AL468_09155 PF06969 HemN C-terminal domain AL468_09155 PF04055 Radical SAM superfamily AL468_09160 PF10675 Protein of unknown function (DUF2489) AL468_09165 PF04220 Der GTPase activator (YihI) AL468_09180 PF00034 Cytochrome c AL468_09185 PF01926 50S ribosome-binding GTPase AL468_09190 PF01612 3'-5' exonuclease AL468_09190 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AL468_09190 PF01367 5'-3' exonuclease, C-terminal SAM fold AL468_09190 PF00476 DNA polymerase family A AL468_09200 PF00583 Acetyltransferase (GNAT) family AL468_09205 PF00490 Delta-aminolevulinic acid dehydratase AL468_09215 PF01026 TatD related DNase AL468_09225 PF00902 Sec-independent protein translocase protein (TatC) AL468_09230 PF02416 mttA/Hcf106 family AL468_09235 PF02416 mttA/Hcf106 family AL468_09240 PF03109 ABC1 family AL468_09245 PF02036 SCP-2 sterol transfer family AL468_09250 PF01209 ubiE/COQ5 methyltransferase family AL468_09255 PF02646 RmuC family AL468_09265 PF03707 Bacterial signalling protein N terminal repeat AL468_09265 PF00563 EAL domain AL468_09265 PF00990 Diguanylate cyclase, GGDEF domain AL468_09270 PF01594 AI-2E family transporter AL468_09305 PF00781 Diacylglycerol kinase catalytic domain AL468_09330 PF01590 GAF domain AL468_09330 PF02954 Bacterial regulatory protein, Fis family AL468_09330 PF00158 Sigma-54 interaction domain AL468_09340 PF10625 Universal stress protein B (UspB) AL468_09345 PF00210 Ferritin-like domain AL468_09350 PF00582 Universal stress protein family AL468_09355 PF00892 EamA-like transporter family AL468_09365 PF04445 Putative SAM-dependent methyltransferase AL468_09370 PF00990 Diguanylate cyclase, GGDEF domain AL468_09370 PF08448 PAS fold AL468_09370 PF00563 EAL domain AL468_09375 PF01037 Lrp/AsnC ligand binding domain AL468_09380 PF01432 Peptidase family M3 AL468_09385 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AL468_09390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL468_09390 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL468_09395 PF03466 LysR substrate binding domain AL468_09395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_09400 PF01048 Phosphorylase superfamily AL468_09405 PF01081 KDPG and KHG aldolase AL468_09410 PF02447 GntP family permease AL468_09415 PF01202 Shikimate kinase AL468_09420 PF00920 Dehydratase family AL468_09425 PF00893 Small Multidrug Resistance protein AL468_09430 PF00893 Small Multidrug Resistance protein AL468_09435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_09435 PF03466 LysR substrate binding domain AL468_09440 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AL468_09440 PF00356 Bacterial regulatory proteins, lacI family AL468_09480 PF00528 Binding-protein-dependent transport system inner membrane component AL468_09480 PF12911 N-terminal TM domain of oligopeptide transport permease C AL468_09490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL468_09495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL468_09495 PF00005 ABC transporter AL468_09505 PF13419 Haloacid dehalogenase-like hydrolase AL468_09535 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AL468_09540 PF00580 UvrD/REP helicase N-terminal domain AL468_09540 PF13361 UvrD-like helicase C-terminal domain AL468_09545 PF16295 Tetracyclin repressor-like, C-terminal domain AL468_09545 PF00440 Bacterial regulatory proteins, tetR family AL468_09550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL468_09555 PF00873 AcrB/AcrD/AcrF family AL468_09560 PF04380 Membrane fusogenic activity AL468_09565 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AL468_09565 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AL468_09570 PF03466 LysR substrate binding domain AL468_09570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_09610 PF00132 Bacterial transferase hexapeptide (six repeats) AL468_09615 PF07369 Protein of unknown function (DUF1488) AL468_09620 PF08501 Shikimate dehydrogenase substrate binding domain AL468_09620 PF01488 Shikimate / quinate 5-dehydrogenase AL468_09620 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AL468_09625 PF01218 Coproporphyrinogen III oxidase AL468_09630 PF01300 Telomere recombination AL468_09635 PF00731 AIR carboxylase AL468_09640 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AL468_09640 PF02222 ATP-grasp domain AL468_09645 PF01396 Topoisomerase DNA binding C4 zinc finger AL468_09650 PF04361 Protein of unknown function (DUF494) AL468_09655 PF02481 DNA recombination-mediator protein A AL468_09655 PF17782 DprA winged helix domain AL468_09665 PF01327 Polypeptide deformylase AL468_09670 PF00551 Formyl transferase AL468_09670 PF02911 Formyl transferase, C-terminal domain AL468_09675 PF01189 16S rRNA methyltransferase RsmB/F AL468_09675 PF01029 NusB family AL468_09680 PF02254 TrkA-N domain AL468_09680 PF02080 TrkA-C domain AL468_09685 PF02386 Cation transport protein AL468_09695 PF03006 Haemolysin-III related AL468_09700 PF07070 SpoOM protein AL468_09710 PF06288 Protein of unknown function (DUF1040) AL468_09715 PF13746 4Fe-4S dicluster domain AL468_09715 PF12801 4Fe-4S binding domain AL468_09715 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AL468_09720 PF01636 Phosphotransferase enzyme family AL468_09725 PF01323 DSBA-like thioredoxin domain AL468_09730 PF01553 Acyltransferase AL468_09740 PF13335 Magnesium chelatase, subunit ChlI C-terminal AL468_09740 PF01078 Magnesium chelatase, subunit ChlI AL468_09745 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL468_09745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL468_09745 PF00205 Thiamine pyrophosphate enzyme, central domain AL468_09755 PF01063 Amino-transferase class IV AL468_09760 PF00920 Dehydratase family AL468_09765 PF00291 Pyridoxal-phosphate dependent enzyme AL468_09765 PF00585 C-terminal regulatory domain of Threonine dehydratase AL468_09770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_09770 PF03466 LysR substrate binding domain AL468_09775 PF07690 Major Facilitator Superfamily AL468_09780 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL468_09785 PF00528 Binding-protein-dependent transport system inner membrane component AL468_09790 PF12804 MobA-like NTP transferase domain AL468_09790 PF00132 Bacterial transferase hexapeptide (six repeats) AL468_09795 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AL468_09795 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AL468_09800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL468_09800 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL468_09805 PF00231 ATP synthase AL468_09810 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL468_09810 PF00306 ATP synthase alpha/beta chain, C terminal domain AL468_09810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL468_09815 PF00213 ATP synthase delta (OSCP) subunit AL468_09820 PF00430 ATP synthase B/B' CF(0) AL468_09825 PF00137 ATP synthase subunit C AL468_09830 PF00119 ATP synthase A chain AL468_09835 PF03899 ATP synthase I chain AL468_09840 PF02195 ParB-like nuclease domain AL468_09840 PF17762 HTH domain found in ParB protein AL468_09845 PF13614 AAA domain AL468_09850 PF02527 rRNA small subunit methyltransferase G AL468_09855 PF13932 GidA associated domain AL468_09855 PF01134 Glucose inhibited division protein A AL468_09860 PF00258 Flavodoxin AL468_09865 PF12631 MnmE helical domain AL468_09865 PF10396 GTP-binding protein TrmE N-terminus AL468_09865 PF01926 50S ribosome-binding GTPase AL468_09870 PF14849 YidC periplasmic domain AL468_09870 PF02096 60Kd inner membrane protein AL468_09875 PF01809 Putative membrane protein insertion efficiency factor AL468_09880 PF00825 Ribonuclease P AL468_09885 PF00468 Ribosomal protein L34 AL468_09890 PF00005 ABC transporter AL468_09895 PF00528 Binding-protein-dependent transport system inner membrane component AL468_09900 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL468_09910 PF11638 DnaA N-terminal domain AL468_09910 PF08299 Bacterial dnaA protein helix-turn-helix AL468_09910 PF00308 Bacterial dnaA protein AL468_09915 PF02768 DNA polymerase III beta subunit, C-terminal domain AL468_09915 PF02767 DNA polymerase III beta subunit, central domain AL468_09915 PF00712 DNA polymerase III beta subunit, N-terminal domain AL468_09920 PF02463 RecF/RecN/SMC N terminal domain AL468_09925 PF00204 DNA gyrase B AL468_09925 PF18053 DNA gyrase B subunit insert domain AL468_09925 PF00986 DNA gyrase B subunit, carboxyl terminus AL468_09925 PF01751 Toprim domain AL468_09925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_09940 PF00011 Hsp20/alpha crystallin family AL468_09945 PF00155 Aminotransferase class I and II AL468_09950 PF00128 Alpha amylase, catalytic domain AL468_09955 PF02092 Glycyl-tRNA synthetase beta subunit AL468_09955 PF05746 DALR anticodon binding domain AL468_09960 PF02091 Glycyl-tRNA synthetase alpha subunit AL468_09965 PF01169 Uncharacterized protein family UPF0016 AL468_09975 PF01206 Sulfurtransferase TusA AL468_09985 PF03466 LysR substrate binding domain AL468_09985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_09990 PF08240 Alcohol dehydrogenase GroES-like domain AL468_09990 PF00107 Zinc-binding dehydrogenase AL468_09995 PF02803 Thiolase, C-terminal domain AL468_09995 PF00108 Thiolase, N-terminal domain AL468_10000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL468_10000 PF00378 Enoyl-CoA hydratase/isomerase AL468_10000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL468_10005 PF09186 Domain of unknown function (DUF1949) AL468_10005 PF01205 Uncharacterized protein family UPF0029 AL468_10010 PF02386 Cation transport protein AL468_10015 PF12724 Flavodoxin domain AL468_10065 PF00394 Multicopper oxidase AL468_10065 PF07732 Multicopper oxidase AL468_10065 PF07731 Multicopper oxidase AL468_10070 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AL468_10075 PF13667 ThiC-associated domain AL468_10075 PF01964 Radical SAM ThiC family AL468_10080 PF02581 Thiamine monophosphate synthase AL468_10085 PF00899 ThiF family AL468_10095 PF05690 Thiazole biosynthesis protein ThiG AL468_10100 PF06968 Biotin and Thiamin Synthesis associated domain AL468_10100 PF04055 Radical SAM superfamily AL468_10105 PF01321 Creatinase/Prolidase N-terminal domain AL468_10105 PF00557 Metallopeptidase family M24 AL468_10105 PF01321 Creatinase/Prolidase N-terminal domain AL468_10105 PF00557 Metallopeptidase family M24 AL468_10110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_10110 PF03466 LysR substrate binding domain AL468_10115 PF07690 Major Facilitator Superfamily AL468_10135 PF05114 Protein of unknown function (DUF692) AL468_10145 PF00580 UvrD/REP helicase N-terminal domain AL468_10145 PF13361 UvrD-like helicase C-terminal domain AL468_10160 PF01810 LysE type translocator AL468_10170 PF00892 EamA-like transporter family AL468_10175 PF09382 RQC domain AL468_10175 PF16124 RecQ zinc-binding AL468_10175 PF00570 HRDC domain AL468_10175 PF00271 Helicase conserved C-terminal domain AL468_10175 PF00270 DEAD/DEAH box helicase AL468_10185 PF02592 Putative vitamin uptake transporter AL468_10190 PF02541 Ppx/GppA phosphatase family AL468_10195 PF00270 DEAD/DEAH box helicase AL468_10195 PF00271 Helicase conserved C-terminal domain AL468_10200 PF00085 Thioredoxin AL468_10205 PF07497 Rho termination factor, RNA-binding domain AL468_10205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL468_10205 PF07498 Rho termination factor, N-terminal domain AL468_10220 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AL468_10230 PF00175 Oxidoreductase NAD-binding domain AL468_10270 PF07219 HemY protein N-terminus AL468_10275 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AL468_10280 PF02602 Uroporphyrinogen-III synthase HemD AL468_10285 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AL468_10285 PF03900 Porphobilinogen deaminase, C-terminal domain AL468_10290 PF01295 Adenylate cyclase, class-I AL468_10290 PF12633 Adenylate cyclase NT domain AL468_10295 PF01491 Frataxin-like domain AL468_10305 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AL468_10305 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AL468_10310 PF01678 Diaminopimelate epimerase AL468_10320 PF00589 Phage integrase family AL468_10320 PF02899 Phage integrase, N-terminal SAM-like domain AL468_10325 PF13419 Haloacid dehalogenase-like hydrolase AL468_10330 PF00990 Diguanylate cyclase, GGDEF domain AL468_10330 PF10442 FIST C domain AL468_10330 PF00563 EAL domain AL468_10330 PF08495 FIST N domain AL468_10355 PF12146 Serine aminopeptidase, S33 AL468_10360 PF01810 LysE type translocator AL468_10365 PF00563 EAL domain AL468_10365 PF08668 HDOD domain AL468_10370 PF01022 Bacterial regulatory protein, arsR family AL468_10375 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL468_10375 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AL468_10395 PF10694 Protein of unknown function (DUF2500) AL468_10425 PF01914 MarC family integral membrane protein AL468_10440 PF02881 SRP54-type protein, helical bundle domain AL468_10440 PF00448 SRP54-type protein, GTPase domain AL468_10445 PF00005 ABC transporter AL468_10450 PF18075 FtsX extracellular domain AL468_10455 PF00140 Sigma-70 factor, region 1.2 AL468_10455 PF04545 Sigma-70, region 4 AL468_10455 PF04542 Sigma-70 region 2 AL468_10465 PF00581 Rhodanese-like domain AL468_10470 PF01694 Rhomboid family AL468_10470 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AL468_10475 PF03748 Flagellar basal body-associated protein FliL AL468_10480 PF04345 Chorismate lyase AL468_10485 PF01040 UbiA prenyltransferase family AL468_10490 PF01553 Acyltransferase AL468_10500 PF00717 Peptidase S24-like AL468_10500 PF01726 LexA DNA binding domain AL468_10510 PF04072 Leucine carboxyl methyltransferase AL468_10515 PF01554 MatE AL468_10520 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL468_10520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL468_10525 PF00440 Bacterial regulatory proteins, tetR family AL468_10535 PF05958 tRNA (Uracil-5-)-methyltransferase AL468_10540 PF00593 TonB dependent receptor AL468_10540 PF07715 TonB-dependent Receptor Plug Domain AL468_10550 PF01177 Asp/Glu/Hydantoin racemase AL468_10585 PF13091 PLD-like domain AL468_10595 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AL468_10595 PF01565 FAD binding domain AL468_10600 PF08279 HTH domain AL468_10600 PF03099 Biotin/lipoate A/B protein ligase family AL468_10600 PF02237 Biotin protein ligase C terminal domain AL468_10605 PF00485 Phosphoribulokinase / Uridine kinase family AL468_10635 PF03143 Elongation factor Tu C-terminal domain AL468_10635 PF03144 Elongation factor Tu domain 2 AL468_10635 PF00009 Elongation factor Tu GTP binding domain AL468_10645 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AL468_10650 PF02357 Transcription termination factor nusG AL468_10650 PF00467 KOW motif AL468_10655 PF00298 Ribosomal protein L11, RNA binding domain AL468_10655 PF03946 Ribosomal protein L11, N-terminal domain AL468_10660 PF00687 Ribosomal protein L1p/L10e family AL468_10665 PF00466 Ribosomal protein L10 AL468_10670 PF00542 Ribosomal protein L7/L12 C-terminal domain AL468_10670 PF16320 Ribosomal protein L7/L12 dimerisation domain AL468_10675 PF04561 RNA polymerase Rpb2, domain 2 AL468_10675 PF10385 RNA polymerase beta subunit external 1 domain AL468_10675 PF04560 RNA polymerase Rpb2, domain 7 AL468_10675 PF04565 RNA polymerase Rpb2, domain 3 AL468_10675 PF00562 RNA polymerase Rpb2, domain 6 AL468_10675 PF04563 RNA polymerase beta subunit AL468_10680 PF04998 RNA polymerase Rpb1, domain 5 AL468_10680 PF05000 RNA polymerase Rpb1, domain 4 AL468_10680 PF00623 RNA polymerase Rpb1, domain 2 AL468_10680 PF04997 RNA polymerase Rpb1, domain 1 AL468_10680 PF04983 RNA polymerase Rpb1, domain 3 AL468_10685 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AL468_10690 PF00293 NUDIX domain AL468_10690 PF09297 NADH pyrophosphatase zinc ribbon domain AL468_10695 PF01208 Uroporphyrinogen decarboxylase (URO-D) AL468_10700 PF03167 Uracil DNA glycosylase superfamily AL468_10705 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL468_10710 PF04222 Protein of unknown function (DUF416) AL468_10715 PF01595 Cyclin M transmembrane N-terminal domain AL468_10715 PF00571 CBS domain AL468_10720 PF00216 Bacterial DNA-binding protein AL468_10730 PF02844 Phosphoribosylglycinamide synthetase, N domain AL468_10730 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AL468_10730 PF02843 Phosphoribosylglycinamide synthetase, C domain AL468_10740 PF01808 AICARFT/IMPCHase bienzyme AL468_10740 PF02142 MGS-like domain AL468_10750 PF13411 MerR HTH family regulatory protein AL468_10755 PF00486 Transcriptional regulatory protein, C terminal AL468_10755 PF18500 CadC C-terminal domain 1 AL468_10765 PF13520 Amino acid permease AL468_10770 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AL468_10770 PF01276 Orn/Lys/Arg decarboxylase, major domain AL468_10770 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AL468_10825 PF00005 ABC transporter AL468_10825 PF12848 ABC transporter AL468_10835 PF02954 Bacterial regulatory protein, Fis family AL468_10840 PF01207 Dihydrouridine synthase (Dus) AL468_10855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AL468_10855 PF00289 Biotin carboxylase, N-terminal domain AL468_10855 PF02785 Biotin carboxylase C-terminal domain AL468_10860 PF00364 Biotin-requiring enzyme AL468_10865 PF01220 Dehydroquinase class II AL468_10870 PF16177 Acetyl-coenzyme A synthetase N-terminus AL468_10870 PF00501 AMP-binding enzyme AL468_10870 PF13193 AMP-binding enzyme C-terminal domain AL468_10885 PF12832 MFS_1 like family AL468_10890 PF09308 LuxQ, periplasmic AL468_10890 PF00072 Response regulator receiver domain AL468_10890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_10890 PF00512 His Kinase A (phospho-acceptor) domain AL468_10895 PF00206 Lyase AL468_10895 PF10415 Fumarase C C-terminus AL468_10910 PF00474 Sodium:solute symporter family AL468_10920 PF00999 Sodium/hydrogen exchanger family AL468_10920 PF03471 Transporter associated domain AL468_10920 PF02080 TrkA-C domain AL468_10925 PF00072 Response regulator receiver domain AL468_10925 PF00196 Bacterial regulatory proteins, luxR family AL468_10930 PF11412 Disulphide bond corrector protein DsbC AL468_10930 PF02683 Cytochrome C biogenesis protein transmembrane region AL468_10935 PF03605 Anaerobic c4-dicarboxylate membrane transporter AL468_10940 PF00206 Lyase AL468_10940 PF10415 Fumarase C C-terminus AL468_10945 PF04186 FxsA cytoplasmic membrane protein AL468_10950 PF00588 SpoU rRNA Methylase family AL468_10955 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AL468_10955 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AL468_10960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_10960 PF00512 His Kinase A (phospho-acceptor) domain AL468_10960 PF16527 Two-component sensor protein CpxA, periplasmic domain AL468_10960 PF00672 HAMP domain AL468_10965 PF00486 Transcriptional regulatory protein, C terminal AL468_10965 PF00072 Response regulator receiver domain AL468_10970 PF07813 LTXXQ motif family protein AL468_10975 PF16916 Dimerisation domain of Zinc Transporter AL468_10975 PF01545 Cation efflux family AL468_10980 PF00365 Phosphofructokinase AL468_10985 PF01554 MatE AL468_10990 PF00166 Chaperonin 10 Kd subunit AL468_10995 PF00118 TCP-1/cpn60 chaperonin family AL468_11005 PF02308 MgtC family AL468_11010 PF04055 Radical SAM superfamily AL468_11015 PF08207 Elongation factor P (EF-P) KOW-like domain AL468_11015 PF09285 Elongation factor P, C-terminal AL468_11015 PF01132 Elongation factor P (EF-P) OB domain AL468_11025 PF02313 Fumarate reductase subunit D AL468_11030 PF02300 Fumarate reductase subunit C AL468_11035 PF13085 2Fe-2S iron-sulfur cluster binding domain AL468_11035 PF13183 4Fe-4S dicluster domain AL468_11040 PF00890 FAD binding domain AL468_11040 PF02910 Fumarate reductase flavoprotein C-term AL468_11045 PF00152 tRNA synthetases class II (D, K and N) AL468_11055 PF08360 QacR-like protein, C-terminal region AL468_11055 PF00440 Bacterial regulatory proteins, tetR family AL468_11065 PF01551 Peptidase family M23 AL468_11070 PF06426 Serine acetyltransferase, N-terminal AL468_11070 PF00132 Bacterial transferase hexapeptide (six repeats) AL468_11075 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AL468_11075 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AL468_11080 PF02556 Preprotein translocase subunit SecB AL468_11085 PF00581 Rhodanese-like domain AL468_11090 PF01676 Metalloenzyme superfamily AL468_11090 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AL468_11100 PF00939 Sodium:sulfate symporter transmembrane region AL468_11105 PF02666 Phosphatidylserine decarboxylase AL468_11110 PF03193 RsgA GTPase AL468_11115 PF00929 Exonuclease AL468_11180 PF08331 Domain of unknown function (DUF1730) AL468_11190 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AL468_11195 PF01520 N-acetylmuramoyl-L-alanine amidase AL468_11200 PF01119 DNA mismatch repair protein, C-terminal domain AL468_11200 PF08676 MutL C terminal dimerisation domain AL468_11210 PF17209 Hfq protein AL468_11215 PF16360 GTP-binding GTPase Middle Region AL468_11215 PF01926 50S ribosome-binding GTPase AL468_11215 PF13167 GTP-binding GTPase N-terminal AL468_11220 PF01145 SPFH domain / Band 7 family AL468_11220 PF12221 Bacterial membrane protein N terminal AL468_11225 PF01145 SPFH domain / Band 7 family AL468_11230 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AL468_11235 PF00709 Adenylosuccinate synthetase AL468_11245 PF08238 Sel1 repeat AL468_11250 PF00970 Oxidoreductase FAD-binding domain AL468_11250 PF00042 Globin AL468_11250 PF00175 Oxidoreductase NAD-binding domain AL468_11255 PF02082 Transcriptional regulator AL468_11260 PF08206 Ribonuclease B OB domain AL468_11260 PF08461 Ribonuclease R winged-helix domain AL468_11260 PF17876 Cold shock domain AL468_11260 PF00773 RNB domain AL468_11260 PF00575 S1 RNA binding domain AL468_11265 PF00588 SpoU rRNA Methylase family AL468_11265 PF08032 RNA 2'-O ribose methyltransferase substrate binding AL468_11270 PF13419 Haloacid dehalogenase-like hydrolase AL468_11275 PF00579 tRNA synthetases class I (W and Y) AL468_11290 PF00117 Glutamine amidotransferase class-I AL468_11295 PF00202 Aminotransferase class-III AL468_11300 PF04958 Arginine N-succinyltransferase beta subunit AL468_11305 PF00171 Aldehyde dehydrogenase family AL468_11315 PF13545 Crp-like helix-turn-helix domain AL468_11315 PF00027 Cyclic nucleotide-binding domain AL468_11320 PF00485 Phosphoribulokinase / Uridine kinase family AL468_11325 PF06794 Uncharacterised protein family (UPF0270) AL468_11330 PF00561 alpha/beta hydrolase fold AL468_11340 PF00005 ABC transporter AL468_11340 PF12848 ABC transporter AL468_11345 PF02525 Flavodoxin-like fold AL468_11350 PF00999 Sodium/hydrogen exchanger family AL468_11350 PF02254 TrkA-N domain AL468_11360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL468_11365 PF01112 Asparaginase AL468_11370 PF04102 SlyX AL468_11380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL468_11380 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AL468_11385 PF13309 HTH domain AL468_11385 PF08348 YheO-like PAS domain AL468_11390 PF02635 DsrE/DsrF-like family AL468_11395 PF02635 DsrE/DsrF-like family AL468_11400 PF04077 DsrH like protein AL468_11405 PF00164 Ribosomal protein S12/S23 AL468_11410 PF00177 Ribosomal protein S7p/S5e AL468_11415 PF00679 Elongation factor G C-terminus AL468_11415 PF14492 Elongation Factor G, domain II AL468_11415 PF03764 Elongation factor G, domain IV AL468_11415 PF00009 Elongation factor Tu GTP binding domain AL468_11415 PF03144 Elongation factor Tu domain 2 AL468_11420 PF03143 Elongation factor Tu C-terminal domain AL468_11420 PF03144 Elongation factor Tu domain 2 AL468_11420 PF00009 Elongation factor Tu GTP binding domain AL468_11425 PF04324 BFD-like [2Fe-2S] binding domain AL468_11430 PF00210 Ferritin-like domain AL468_11435 PF03949 Malic enzyme, NAD binding domain AL468_11435 PF00390 Malic enzyme, N-terminal domain AL468_11445 PF01053 Cys/Met metabolism PLP-dependent enzyme AL468_11450 PF00696 Amino acid kinase family AL468_11450 PF00742 Homoserine dehydrogenase AL468_11450 PF03447 Homoserine dehydrogenase, NAD binding domain AL468_11455 PF02219 Methylenetetrahydrofolate reductase AL468_11465 PF00311 Phosphoenolpyruvate carboxylase AL468_11470 PF07687 Peptidase dimerisation domain AL468_11470 PF01546 Peptidase family M20/M25/M40 AL468_11475 PF02774 Semialdehyde dehydrogenase, dimerisation domain AL468_11475 PF01118 Semialdehyde dehydrogenase, NAD binding domain AL468_11480 PF00696 Amino acid kinase family AL468_11485 PF00764 Arginosuccinate synthase AL468_11490 PF14698 Argininosuccinate lyase C-terminal AL468_11490 PF00583 Acetyltransferase (GNAT) family AL468_11490 PF00206 Lyase AL468_11505 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL468_11505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL468_11510 PF00462 Glutaredoxin AL468_11510 PF08534 Redoxin AL468_11520 PF03466 LysR substrate binding domain AL468_11520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_11525 PF00905 Penicillin binding protein transpeptidase domain AL468_11525 PF00912 Transglycosylase AL468_11525 PF17092 Penicillin-binding protein OB-like domain AL468_11550 PF07660 Secretin and TonB N terminus short domain AL468_11550 PF03958 Bacterial type II/III secretion system short domain AL468_11550 PF00263 Bacterial type II and III secretion system protein AL468_11550 PF11741 AMIN domain AL468_11555 PF01202 Shikimate kinase AL468_11560 PF01761 3-dehydroquinate synthase AL468_11570 PF02086 D12 class N6 adenine-specific DNA methyltransferase AL468_11575 PF00834 Ribulose-phosphate 3 epimerase family AL468_11580 PF01250 Ribosomal protein S6 AL468_11585 PF00436 Single-strand binding protein family AL468_11590 PF01084 Ribosomal protein S18 AL468_11595 PF03948 Ribosomal protein L9, C-terminal domain AL468_11595 PF01281 Ribosomal protein L9, N-terminal domain AL468_11605 PF00772 DnaB-like helicase N terminal domain AL468_11605 PF03796 DnaB-like helicase C terminal domain AL468_11610 PF01168 Alanine racemase, N-terminal domain AL468_11610 PF00842 Alanine racemase, C-terminal domain AL468_11615 PF01894 Uncharacterised protein family UPF0047 AL468_11620 PF00342 Phosphoglucose isomerase AL468_11630 PF01475 Ferric uptake regulator family AL468_11635 PF01207 Dihydrouridine synthase (Dus) AL468_11655 PF00667 FAD binding domain AL468_11655 PF00258 Flavodoxin AL468_11655 PF00175 Oxidoreductase NAD-binding domain AL468_11660 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AL468_11660 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AL468_11665 PF01507 Phosphoadenosine phosphosulfate reductase family AL468_11725 PF00999 Sodium/hydrogen exchanger family AL468_11730 PF02574 Homocysteine S-methyltransferase AL468_11730 PF02965 Vitamin B12 dependent methionine synthase, activation domain AL468_11730 PF02607 B12 binding domain AL468_11730 PF02310 B12 binding domain AL468_11730 PF00809 Pterin binding enzyme AL468_11735 PF01842 ACT domain AL468_11735 PF00696 Amino acid kinase family AL468_11745 PF00266 Aminotransferase class-V AL468_11755 PF00005 ABC transporter AL468_11755 PF17760 UvrA interaction domain AL468_11755 PF17755 UvrA DNA-binding domain AL468_11760 PF00483 Nucleotidyl transferase AL468_11765 PF00196 Bacterial regulatory proteins, luxR family AL468_11770 PF00436 Single-strand binding protein family AL468_11800 PF13538 UvrD-like helicase C-terminal domain AL468_11825 PF00563 EAL domain AL468_11825 PF00990 Diguanylate cyclase, GGDEF domain AL468_11825 PF17157 Gammaproteobacterial periplasmic sensor domain AL468_11845 PF00263 Bacterial type II and III secretion system protein AL468_11845 PF03958 Bacterial type II/III secretion system short domain AL468_11850 PF13401 AAA domain AL468_11850 PF01471 Putative peptidoglycan binding domain AL468_11860 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AL468_11860 PF00437 Type II/IV secretion system protein AL468_11865 PF00482 Type II secretion system (T2SS), protein F AL468_11875 PF07963 Prokaryotic N-terminal methylation motif AL468_11875 PF00114 Pilin (bacterial filament) AL468_11915 PF04085 rod shape-determining protein MreC AL468_11920 PF04093 rod shape-determining protein MreD AL468_11925 PF02545 Maf-like protein AL468_11930 PF00575 S1 RNA binding domain AL468_11930 PF10150 Ribonuclease E/G family AL468_11935 PF13116 Protein of unknown function AL468_11935 PF13502 AsmA-like C-terminal region AL468_11940 PF00795 Carbon-nitrogen hydrolase AL468_11945 PF01523 Putative modulator of DNA gyrase AL468_11950 PF13638 PIN domain AL468_11950 PF02562 PhoH-like protein AL468_11955 PF12137 RNA polymerase recycling family C-terminal AL468_11955 PF00176 SNF2 family N-terminal domain AL468_11955 PF00271 Helicase conserved C-terminal domain AL468_11955 PF18339 RapA N-terminal Tudor like domain 1 AL468_11955 PF18337 RapA N-terminal Tudor like domain AL468_11965 PF00849 RNA pseudouridylate synthase AL468_11970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL468_11970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL468_11975 PF04751 Protein of unknown function (DUF615) AL468_11980 PF01523 Putative modulator of DNA gyrase AL468_11985 PF03448 MgtE intracellular N domain AL468_11985 PF01769 Divalent cation transporter AL468_11985 PF00571 CBS domain AL468_11990 PF00381 PTS HPr component phosphorylation site AL468_11995 PF03668 P-loop ATPase protein family AL468_12000 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL468_12005 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AL468_12010 PF00309 Sigma-54 factor, Activator interacting domain (AID) AL468_12010 PF04963 Sigma-54 factor, core binding domain AL468_12010 PF04552 Sigma-54, DNA binding domain AL468_12015 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL468_12015 PF00005 ABC transporter AL468_12020 PF03968 OstA-like protein AL468_12030 PF00571 CBS domain AL468_12030 PF01380 SIS domain AL468_12035 PF01699 Sodium/calcium exchanger protein AL468_12040 PF00005 ABC transporter AL468_12045 PF02405 Permease MlaE AL468_12050 PF02470 MlaD protein AL468_12055 PF05494 MlaC protein AL468_12065 PF01722 BolA-like protein AL468_12070 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AL468_12075 PF01553 Acyltransferase AL468_12080 PF01042 Endoribonuclease L-PSP AL468_12085 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AL468_12085 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AL468_12090 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AL468_12090 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AL468_12100 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AL468_12100 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AL468_12110 PF06877 Regulator of ribonuclease activity B AL468_12120 PF00583 Acetyltransferase (GNAT) family AL468_12130 PF10458 Valyl tRNA synthetase tRNA binding arm AL468_12130 PF08264 Anticodon-binding domain of tRNA AL468_12130 PF00133 tRNA synthetases class I (I, L, M and V) AL468_12135 PF04364 DNA polymerase III chi subunit, HolC AL468_12145 PF03739 Lipopolysaccharide export system permease LptF/LptG AL468_12150 PF03739 Lipopolysaccharide export system permease LptF/LptG AL468_12160 PF10011 Predicted membrane protein (DUF2254) AL468_12175 PF01522 Polysaccharide deacetylase AL468_12180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL468_12185 PF02378 Phosphotransferase system, EIIC AL468_12190 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AL468_12195 PF02056 Family 4 glycosyl hydrolase AL468_12195 PF11975 Family 4 glycosyl hydrolase C-terminal domain AL468_12200 PF04794 YdjC-like protein AL468_12205 PF00356 Bacterial regulatory proteins, lacI family AL468_12205 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AL468_12255 PF00171 Aldehyde dehydrogenase family AL468_12285 PF17200 Single Cache domain 2 AL468_12285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL468_12285 PF00672 HAMP domain AL468_12325 PF01464 Transglycosylase SLT domain AL468_12325 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AL468_12330 PF04362 Bacterial Fe(2+) trafficking AL468_12335 PF00730 HhH-GPD superfamily base excision DNA repair protein AL468_12335 PF14815 NUDIX domain AL468_12335 PF00633 Helix-hairpin-helix motif AL468_12340 PF02390 Putative methyltransferase AL468_12345 PF02086 D12 class N6 adenine-specific DNA methyltransferase AL468_12350 PF04960 Glutaminase AL468_12355 PF06969 HemN C-terminal domain AL468_12355 PF04055 Radical SAM superfamily AL468_12360 PF01725 Ham1 family AL468_12370 PF02594 Uncharacterised ACR, YggU family COG1872 AL468_12375 PF02325 YGGT family AL468_12380 PF14748 Pyrroline-5-carboxylate reductase dimerisation AL468_12380 PF03807 NADP oxidoreductase coenzyme F420-dependent AL468_12385 PF01168 Alanine racemase, N-terminal domain AL468_12390 PF00437 Type II/IV secretion system protein AL468_12395 PF00437 Type II/IV secretion system protein AL468_12400 PF03652 Holliday junction resolvase AL468_12405 PF02622 Uncharacterized ACR, COG1678 AL468_12410 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AL468_12410 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AL468_12415 PF04452 RNA methyltransferase AL468_12420 PF04231 Endonuclease I AL468_12425 PF10263 SprT-like family AL468_12425 PF17283 SprT-like zinc ribbon domain AL468_12435 PF02773 S-adenosylmethionine synthetase, C-terminal domain AL468_12435 PF02772 S-adenosylmethionine synthetase, central domain AL468_12435 PF00438 S-adenosylmethionine synthetase, N-terminal domain AL468_12445 PF00456 Transketolase, thiamine diphosphate binding domain AL468_12445 PF02779 Transketolase, pyrimidine binding domain AL468_12445 PF02780 Transketolase, C-terminal domain AL468_12450 PF03466 LysR substrate binding domain AL468_12450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_12455 PF00593 TonB dependent receptor AL468_12455 PF07715 TonB-dependent Receptor Plug Domain AL468_12460 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AL468_12460 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL468_12465 PF00162 Phosphoglycerate kinase AL468_12470 PF01116 Fructose-bisphosphate aldolase class-II AL468_12475 PF00924 Mechanosensitive ion channel AL468_12475 PF05552 Conserved TM helix AL468_12485 PF01810 LysE type translocator AL468_12490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_12490 PF03466 LysR substrate binding domain AL468_12495 PF04402 Protein of unknown function (DUF541) AL468_12500 PF01842 ACT domain AL468_12500 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL468_12500 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL468_12505 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AL468_12510 PF01812 5-formyltetrahydrofolate cyclo-ligase family AL468_12520 PF05164 Cell division protein ZapA AL468_12530 PF03695 Uncharacterised protein family (UPF0149) AL468_12535 PF01494 FAD binding domain AL468_12540 PF01494 FAD binding domain AL468_12555 PF01571 Aminomethyltransferase folate-binding domain AL468_12560 PF03937 Flavinator of succinate dehydrogenase AL468_12570 PF00890 FAD binding domain AL468_12570 PF02910 Fumarate reductase flavoprotein C-term AL468_12580 PF08281 Sigma-70, region 4 AL468_12580 PF04542 Sigma-70 region 2 AL468_12585 PF03872 Anti sigma-E protein RseA, N-terminal domain AL468_12585 PF03873 Anti sigma-E protein RseA, C-terminal domain AL468_12590 PF17188 MucB/RseB C-terminal domain AL468_12590 PF03888 MucB/RseB N-terminal domain AL468_12600 PF00679 Elongation factor G C-terminus AL468_12600 PF00009 Elongation factor Tu GTP binding domain AL468_12600 PF06421 GTP-binding protein LepA C-terminus AL468_12600 PF03144 Elongation factor Tu domain 2 AL468_12605 PF10502 Signal peptidase, peptidase S26 AL468_12610 PF14622 Ribonuclease-III-like AL468_12610 PF00035 Double-stranded RNA binding motif AL468_12615 PF07650 KH domain AL468_12615 PF01926 50S ribosome-binding GTPase AL468_12620 PF11967 Recombination protein O N terminal AL468_12620 PF02565 Recombination protein O C terminal AL468_12625 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AL468_12630 PF01648 4'-phosphopantetheinyl transferase superfamily AL468_12635 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL468_12635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_12635 PF00072 Response regulator receiver domain AL468_12635 PF00512 His Kinase A (phospho-acceptor) domain AL468_12635 PF01627 Hpt domain AL468_12635 PF00672 HAMP domain AL468_12645 PF01938 TRAM domain AL468_12645 PF05958 tRNA (Uracil-5-)-methyltransferase AL468_12655 PF04607 Region found in RelA / SpoT proteins AL468_12655 PF13291 ACT domain AL468_12655 PF02824 TGS domain AL468_12660 PF03819 MazG nucleotide pyrophosphohydrolase domain AL468_12665 PF06418 CTP synthase N-terminus AL468_12665 PF00117 Glutamine amidotransferase class-I AL468_12670 PF03952 Enolase, N-terminal domain AL468_12670 PF00113 Enolase, C-terminal TIM barrel domain AL468_12675 PF04977 Septum formation initiator AL468_12680 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AL468_12685 PF02542 YgbB family AL468_12690 PF01142 tRNA pseudouridine synthase D (TruD) AL468_12695 PF01975 Survival protein SurE AL468_12705 PF01551 Peptidase family M23 AL468_12705 PF01476 LysM domain AL468_12710 PF04542 Sigma-70 region 2 AL468_12710 PF00140 Sigma-70 factor, region 1.2 AL468_12710 PF04545 Sigma-70, region 4 AL468_12710 PF04539 Sigma-70 region 3 AL468_12715 PF01624 MutS domain I AL468_12715 PF05190 MutS family domain IV AL468_12715 PF05188 MutS domain II AL468_12715 PF05192 MutS domain III AL468_12715 PF00488 MutS domain V AL468_12720 PF02464 Competence-damaged protein AL468_12725 PF00154 recA bacterial DNA recombination protein AL468_12730 PF02631 RecX family AL468_12735 PF01411 tRNA synthetases class II (A) AL468_12735 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AL468_12735 PF02272 DHHA1 domain AL468_12740 PF01842 ACT domain AL468_12740 PF13840 ACT domain AL468_12740 PF00696 Amino acid kinase family AL468_12745 PF02599 Global regulator protein family AL468_12805 PF04277 Oxaloacetate decarboxylase, gamma chain AL468_12810 PF00364 Biotin-requiring enzyme AL468_12810 PF02436 Conserved carboxylase domain AL468_12810 PF00682 HMGL-like AL468_12815 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AL468_12825 PF09335 SNARE associated Golgi protein AL468_12830 PF00675 Insulinase (Peptidase family M16) AL468_12830 PF05193 Peptidase M16 inactive domain AL468_12835 PF04262 Glutamate-cysteine ligase AL468_12845 PF02664 S-Ribosylhomocysteinase (LuxS) AL468_12850 PF01595 Cyclin M transmembrane N-terminal domain AL468_12850 PF00571 CBS domain AL468_12850 PF03471 Transporter associated domain AL468_12855 PF01578 Cytochrome C assembly protein AL468_12860 PF02881 SRP54-type protein, helical bundle domain AL468_12860 PF00448 SRP54-type protein, GTPase domain AL468_12860 PF02978 Signal peptide binding domain AL468_12865 PF00886 Ribosomal protein S16 AL468_12870 PF05239 PRC-barrel domain AL468_12870 PF01782 RimM N-terminal domain AL468_12875 PF01746 tRNA (Guanine-1)-methyltransferase AL468_12880 PF01245 Ribosomal protein L19 AL468_12885 PF03884 DNA gyrase inhibitor YacG AL468_12890 PF07072 Cell division protein AL468_12895 PF01121 Dephospho-CoA kinase AL468_12900 PF01478 Type IV leader peptidase family AL468_12900 PF06750 Bacterial Peptidase A24 N-terminal domain AL468_12905 PF00482 Type II secretion system (T2SS), protein F AL468_12910 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AL468_12910 PF00437 Type II/IV secretion system protein AL468_12915 PF07963 Prokaryotic N-terminal methylation motif AL468_12925 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AL468_12925 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AL468_12930 PF01510 N-acetylmuramoyl-L-alanine amidase AL468_12935 PF00392 Bacterial regulatory proteins, gntR family AL468_12935 PF07729 FCD domain AL468_12940 PF17831 Pyruvate dehydrogenase E1 component middle domain AL468_12940 PF00456 Transketolase, thiamine diphosphate binding domain AL468_12945 PF02817 e3 binding domain AL468_12945 PF00364 Biotin-requiring enzyme AL468_12945 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AL468_12950 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL468_12950 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL468_12955 PF00440 Bacterial regulatory proteins, tetR family AL468_12960 PF00156 Phosphoribosyl transferase domain AL468_12965 PF00484 Carbonic anhydrase AL468_12970 PF00916 Sulfate permease family AL468_12970 PF01740 STAS domain AL468_12975 PF00005 ABC transporter AL468_12980 PF01061 ABC-2 type transporter AL468_12990 PF03279 Bacterial lipid A biosynthesis acyltransferase AL468_12995 PF02569 Pantoate-beta-alanine ligase AL468_13000 PF02548 Ketopantoate hydroxymethyltransferase AL468_13005 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AL468_13010 PF01743 Poly A polymerase head domain AL468_13010 PF12627 Probable RNA and SrmB- binding site of polymerase A AL468_13010 PF12626 Polymerase A arginine-rich C-terminus AL468_13015 PF00749 tRNA synthetases class I (E and Q), catalytic domain AL468_13020 PF01258 Prokaryotic dksA/traR C4-type zinc finger AL468_13025 PF17746 SfsA N-terminal OB domain AL468_13025 PF03749 Sugar fermentation stimulation protein RE domain AL468_13030 PF04408 Helicase associated domain (HA2) AL468_13030 PF08482 ATP-dependent helicase C-terminal AL468_13030 PF00270 DEAD/DEAH box helicase AL468_13030 PF00271 Helicase conserved C-terminal domain AL468_13035 PF00905 Penicillin binding protein transpeptidase domain AL468_13035 PF00912 Transglycosylase AL468_13035 PF14814 Bifunctional transglycosylase second domain AL468_13040 PF01734 Patatin-like phospholipase AL468_13045 PF00330 Aconitase family (aconitate hydratase) AL468_13045 PF11791 Aconitate B N-terminal domain AL468_13045 PF06434 Aconitate hydratase 2 N-terminus AL468_13050 PF06062 Uncharacterised protein family (UPF0231) AL468_13055 PF00543 Nitrogen regulatory protein P-II AL468_13060 PF00909 Ammonium Transporter Family AL468_13065 PF13416 Bacterial extracellular solute-binding protein AL468_13075 PF00005 ABC transporter AL468_13075 PF08402 TOBE domain AL468_13080 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL468_13080 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL468_13080 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL468_13080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL468_13085 PF06165 Glycosyltransferase family 36 AL468_13085 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AL468_13090 PF00728 Glycosyl hydrolase family 20, catalytic domain AL468_13090 PF02838 Glycosyl hydrolase family 20, domain 2 AL468_13095 PF01869 BadF/BadG/BcrA/BcrD ATPase family AL468_13105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL468_13105 PF00005 ABC transporter AL468_13110 PF00005 ABC transporter AL468_13110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL468_13120 PF00528 Binding-protein-dependent transport system inner membrane component AL468_13125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL468_13130 PF00512 His Kinase A (phospho-acceptor) domain AL468_13130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_13130 PF00072 Response regulator receiver domain AL468_13130 PF09308 LuxQ, periplasmic AL468_13135 PF08468 Methyltransferase small domain N-terminal AL468_13135 PF05175 Methyltransferase small domain AL468_13140 PF01594 AI-2E family transporter AL468_13145 PF00202 Aminotransferase class-III AL468_13150 PF01521 Iron-sulphur cluster biosynthesis AL468_13160 PF00873 AcrB/AcrD/AcrF family AL468_13165 PF01551 Peptidase family M23 AL468_13165 PF08525 Opacity-associated protein A N-terminal motif AL468_13165 PF01476 LysM domain AL468_13170 PF00579 tRNA synthetases class I (W and Y) AL468_13180 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AL468_13185 PF13609 Gram-negative porin AL468_13190 PF01272 Transcription elongation factor, GreA/GreB, C-term AL468_13190 PF03449 Transcription elongation factor, N-terminal AL468_13195 PF01985 CRS1 / YhbY (CRM) domain AL468_13200 PF01728 FtsJ-like methyltransferase AL468_13205 PF17862 AAA+ lid domain AL468_13205 PF06480 FtsH Extracellular AL468_13205 PF01434 Peptidase family M41 AL468_13205 PF00004 ATPase family associated with various cellular activities (AAA) AL468_13210 PF00809 Pterin binding enzyme AL468_13215 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL468_13215 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL468_13215 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL468_13215 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL468_13225 PF03840 Preprotein translocase SecG subunit AL468_13240 PF02576 RimP N-terminal domain AL468_13240 PF17384 RimP C-terminal SH3 domain AL468_13245 PF00575 S1 RNA binding domain AL468_13245 PF13184 NusA-like KH domain AL468_13245 PF08529 NusA N-terminal domain AL468_13250 PF08364 Bacterial translation initiation factor IF-2 associated region AL468_13250 PF11987 Translation-initiation factor 2 AL468_13250 PF00009 Elongation factor Tu GTP binding domain AL468_13250 PF04760 Translation initiation factor IF-2, N-terminal region AL468_13255 PF02033 Ribosome-binding factor A AL468_13260 PF01509 TruB family pseudouridylate synthase (N terminal domain) AL468_13260 PF09157 Pseudouridine synthase II TruB, C-terminal AL468_13260 PF16198 tRNA pseudouridylate synthase B C-terminal domain AL468_13265 PF00312 Ribosomal protein S15 AL468_13270 PF00575 S1 RNA binding domain AL468_13270 PF03725 3' exoribonuclease family, domain 2 AL468_13270 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AL468_13270 PF01138 3' exoribonuclease family, domain 1 AL468_13270 PF00013 KH domain AL468_13275 PF13181 Tetratricopeptide repeat AL468_13275 PF07719 Tetratricopeptide repeat AL468_13285 PF01554 MatE AL468_13300 PF00990 Diguanylate cyclase, GGDEF domain AL468_13300 PF03707 Bacterial signalling protein N terminal repeat AL468_13300 PF00563 EAL domain AL468_13315 PF13508 Acetyltransferase (GNAT) domain AL468_13335 PF03144 Elongation factor Tu domain 2 AL468_13335 PF00009 Elongation factor Tu GTP binding domain AL468_13335 PF16658 Class II release factor RF3, C-terminal domain AL468_13345 PF01026 TatD related DNase AL468_13350 PF07670 Nucleoside recognition AL468_13350 PF07662 Na+ dependent nucleoside transporter C-terminus AL468_13350 PF01773 Na+ dependent nucleoside transporter N-terminus AL468_13360 PF01791 DeoC/LacD family aldolase AL468_13365 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AL468_13365 PF02885 Glycosyl transferase family, helical bundle domain AL468_13365 PF00591 Glycosyl transferase family, a/b domain AL468_13370 PF01676 Metalloenzyme superfamily AL468_13375 PF01048 Phosphorylase superfamily AL468_13385 PF18429 Domain of unknown function (DUF5609) AL468_13395 PF18073 Rubredoxin metal binding domain AL468_13400 PF03144 Elongation factor Tu domain 2 AL468_13400 PF00679 Elongation factor G C-terminus AL468_13400 PF00009 Elongation factor Tu GTP binding domain AL468_13400 PF14492 Elongation Factor G, domain II AL468_13400 PF03764 Elongation factor G, domain IV AL468_13405 PF03466 LysR substrate binding domain AL468_13405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_13415 PF00501 AMP-binding enzyme AL468_13420 PF12833 Helix-turn-helix domain AL468_13420 PF02805 Metal binding domain of Ada AL468_13445 PF00263 Bacterial type II and III secretion system protein AL468_13445 PF04972 BON domain AL468_13445 PF13629 Pilus formation protein N terminal region AL468_13475 PF00437 Type II/IV secretion system protein AL468_13505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_13505 PF03466 LysR substrate binding domain AL468_13510 PF13520 Amino acid permease AL468_13515 PF04074 YhcH/YjgK/YiaL AL468_13520 PF02837 Glycosyl hydrolases family 2, sugar binding domain AL468_13520 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AL468_13520 PF00703 Glycosyl hydrolases family 2 AL468_13520 PF02929 Beta galactosidase small chain AL468_13520 PF16353 Domain of unknown function(DUF4981) AL468_13525 PF00356 Bacterial regulatory proteins, lacI family AL468_13535 PF16363 GDP-mannose 4,6 dehydratase AL468_13540 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AL468_13540 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AL468_13545 PF10509 Galactokinase galactose-binding signature AL468_13545 PF08544 GHMP kinases C terminal AL468_13545 PF00288 GHMP kinases N terminal domain AL468_13550 PF01263 Aldose 1-epimerase AL468_13555 PF00474 Sodium:solute symporter family AL468_13565 PF07733 Bacterial DNA polymerase III alpha NTPase domain AL468_13565 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AL468_13565 PF14579 Helix-hairpin-helix motif AL468_13565 PF02811 PHP domain AL468_13565 PF00929 Exonuclease AL468_13570 PF00356 Bacterial regulatory proteins, lacI family AL468_13575 PF01588 Putative tRNA binding domain AL468_13595 PF01544 CorA-like Mg2+ transporter protein AL468_13600 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AL468_13600 PF01266 FAD dependent oxidoreductase AL468_13605 PF00455 DeoR C terminal sensor domain AL468_13605 PF08220 DeoR-like helix-turn-helix domain AL468_13610 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AL468_13610 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AL468_13615 PF00230 Major intrinsic protein AL468_13625 PF07690 Major Facilitator Superfamily AL468_13630 PF03009 Glycerophosphoryl diester phosphodiesterase family AL468_13635 PF14602 Hexapeptide repeat of succinyl-transferase AL468_13635 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle AL468_13640 PF07130 YebG protein AL468_13645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_13645 PF03466 LysR substrate binding domain AL468_13655 PF00884 Sulfatase AL468_13655 PF11893 Domain of unknown function (DUF3413) AL468_13660 PF17946 RecC C-terminal domain AL468_13670 PF00580 UvrD/REP helicase N-terminal domain AL468_13670 PF12705 PD-(D/E)XK nuclease superfamily AL468_13670 PF13361 UvrD-like helicase C-terminal domain AL468_13675 PF13538 UvrD-like helicase C-terminal domain AL468_13700 PF00583 Acetyltransferase (GNAT) family AL468_13700 PF00696 Amino acid kinase family AL468_13715 PF06725 3D domain AL468_13715 PF03562 MltA specific insert domain AL468_13720 PF00899 ThiF family AL468_13725 PF02657 Fe-S metabolism associated domain AL468_13730 PF17158 Membrane-associated sensor, integral membrane domain AL468_13730 PF00990 Diguanylate cyclase, GGDEF domain AL468_13735 PF00266 Aminotransferase class-V AL468_13740 PF01965 DJ-1/PfpI family AL468_13745 PF02558 Ketopantoate reductase PanE/ApbA AL468_13745 PF08546 Ketopantoate reductase PanE/ApbA C terminal AL468_13750 PF03502 Nucleoside-specific channel-forming protein, Tsx AL468_13770 PF04545 Sigma-70, region 4 AL468_13770 PF04542 Sigma-70 region 2 AL468_13780 PF07690 Major Facilitator Superfamily AL468_13785 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AL468_13790 PF03923 Uncharacterized lipoprotein AL468_13790 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AL468_13795 PF05175 Methyltransferase small domain AL468_13800 PF01722 BolA-like protein AL468_13810 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AL468_13810 PF11973 NQRA C-terminal domain AL468_13815 PF03116 NQR2, RnfD, RnfE family AL468_13820 PF04205 FMN-binding domain AL468_13825 PF02508 Rnf-Nqr subunit, membrane protein AL468_13830 PF02508 Rnf-Nqr subunit, membrane protein AL468_13835 PF00175 Oxidoreductase NAD-binding domain AL468_13835 PF00970 Oxidoreductase FAD-binding domain AL468_13835 PF00111 2Fe-2S iron-sulfur cluster binding domain AL468_13840 PF02424 ApbE family AL468_13855 PF11798 IMS family HHH motif AL468_13855 PF00817 impB/mucB/samB family AL468_13855 PF11799 impB/mucB/samB family C-terminal domain AL468_13860 PF09382 RQC domain AL468_13860 PF16124 RecQ zinc-binding AL468_13860 PF00570 HRDC domain AL468_13860 PF00271 Helicase conserved C-terminal domain AL468_13860 PF00270 DEAD/DEAH box helicase AL468_13865 PF03449 Transcription elongation factor, N-terminal AL468_13865 PF01272 Transcription elongation factor, GreA/GreB, C-term AL468_13875 PF06483 Chitinase C AL468_13875 PF00704 Glycosyl hydrolases family 18 AL468_13880 PF00209 Sodium:neurotransmitter symporter family AL468_13890 PF06786 Uncharacterised protein family (UPF0253) AL468_13900 PF04073 Aminoacyl-tRNA editing domain AL468_13900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AL468_13900 PF03129 Anticodon binding domain AL468_13905 PF01980 tRNA-methyltransferase O AL468_13905 PF18389 TrmO C-terminal domain AL468_13910 PF01197 Ribosomal protein L31 AL468_13915 PF00444 Ribosomal protein L36 AL468_13920 PF03806 AbgT putative transporter family AL468_13945 PF01370 NAD dependent epimerase/dehydratase family AL468_13950 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AL468_13950 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AL468_13955 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AL468_13980 PF04287 tRNA pseudouridine synthase C AL468_13980 PF00849 RNA pseudouridylate synthase AL468_13985 PF00849 RNA pseudouridylate synthase AL468_13990 PF11944 Protein of unknown function (DUF3461) AL468_13995 PF08335 GlnD PII-uridylyltransferase AL468_13995 PF01842 ACT domain AL468_13995 PF01966 HD domain AL468_13995 PF01909 Nucleotidyltransferase domain AL468_14000 PF00557 Metallopeptidase family M24 AL468_14005 PF00318 Ribosomal protein S2 AL468_14010 PF00889 Elongation factor TS AL468_14015 PF00696 Amino acid kinase family AL468_14020 PF01765 Ribosome recycling factor AL468_14025 PF01255 Putative undecaprenyl diphosphate synthase AL468_14035 PF13288 DXP reductoisomerase C-terminal domain AL468_14035 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AL468_14035 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AL468_14040 PF02163 Peptidase family M50 AL468_14040 PF17820 PDZ domain AL468_14045 PF07244 Surface antigen variable number repeat AL468_14045 PF01103 Surface antigen AL468_14050 PF03938 Outer membrane protein (OmpH-like) AL468_14055 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AL468_14055 PF00132 Bacterial transferase hexapeptide (six repeats) AL468_14060 PF07977 FabA-like domain AL468_14065 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AL468_14065 PF00132 Bacterial transferase hexapeptide (six repeats) AL468_14070 PF02684 Lipid-A-disaccharide synthetase AL468_14075 PF01351 Ribonuclease HII AL468_14080 PF14579 Helix-hairpin-helix motif AL468_14080 PF01336 OB-fold nucleic acid binding domain AL468_14080 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AL468_14080 PF02811 PHP domain AL468_14080 PF07733 Bacterial DNA polymerase III alpha NTPase domain AL468_14085 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AL468_14090 PF01171 PP-loop family AL468_14090 PF09179 TilS substrate binding domain AL468_14090 PF11734 TilS substrate C-terminal domain AL468_14095 PF00034 Cytochrome c AL468_14100 PF00543 Nitrogen regulatory protein P-II AL468_14105 PF03372 Endonuclease/Exonuclease/phosphatase family AL468_14115 PF01464 Transglycosylase SLT domain AL468_14115 PF01476 LysM domain AL468_14120 PF00753 Metallo-beta-lactamase superfamily AL468_14120 PF16123 Hydroxyacylglutathione hydrolase C-terminus AL468_14125 PF08241 Methyltransferase domain AL468_14130 PF00075 RNase H AL468_14135 PF00929 Exonuclease AL468_14160 PF00916 Sulfate permease family AL468_14160 PF01740 STAS domain AL468_14165 PF09317 Domain of unknown function (DUF1974) AL468_14165 PF02770 Acyl-CoA dehydrogenase, middle domain AL468_14165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL468_14165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL468_14170 PF13580 SIS domain AL468_14175 PF13230 Glutamine amidotransferases class-II AL468_14180 PF00551 Formyl transferase AL468_14185 PF00586 AIR synthase related protein, N-terminal domain AL468_14185 PF02769 AIR synthase related protein, C-terminal domain AL468_14195 PF00860 Permease family AL468_14215 PF01435 Peptidase family M48 AL468_14215 PF13181 Tetratricopeptide repeat AL468_14225 PF01594 AI-2E family transporter AL468_14230 PF00578 AhpC/TSA family AL468_14240 PF00701 Dihydrodipicolinate synthetase family AL468_14260 PF07687 Peptidase dimerisation domain AL468_14260 PF01546 Peptidase family M20/M25/M40 AL468_14265 PF03960 ArsC family AL468_14285 PF11143 Protein of unknown function (DUF2919) AL468_14290 PF04261 Dyp-type peroxidase family AL468_14295 PF00669 Bacterial flagellin N-terminal helical region AL468_14295 PF07196 Flagellin hook IN motif AL468_14295 PF00700 Bacterial flagellin C-terminal helical region AL468_14305 PF00669 Bacterial flagellin N-terminal helical region AL468_14305 PF07196 Flagellin hook IN motif AL468_14305 PF00700 Bacterial flagellin C-terminal helical region AL468_14310 PF00669 Bacterial flagellin N-terminal helical region AL468_14310 PF00700 Bacterial flagellin C-terminal helical region AL468_14310 PF07196 Flagellin hook IN motif AL468_14315 PF03646 FlaG protein AL468_14320 PF02465 Flagellar hook-associated protein 2 N-terminus AL468_14320 PF07195 Flagellar hook-associated protein 2 C-terminus AL468_14320 PF07196 Flagellin hook IN motif AL468_14330 PF02561 Flagellar protein FliS AL468_14335 PF00158 Sigma-54 interaction domain AL468_14335 PF02954 Bacterial regulatory protein, Fis family AL468_14335 PF01590 GAF domain AL468_14340 PF00512 His Kinase A (phospho-acceptor) domain AL468_14340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_14345 PF00158 Sigma-54 interaction domain AL468_14345 PF00072 Response regulator receiver domain AL468_14345 PF02954 Bacterial regulatory protein, Fis family AL468_14350 PF02049 Flagellar hook-basal body complex protein FliE AL468_14355 PF01514 Secretory protein of YscJ/FliF family AL468_14355 PF08345 Flagellar M-ring protein C-terminal AL468_14360 PF01706 FliG C-terminal domain AL468_14360 PF14841 FliG middle domain AL468_14360 PF14842 FliG N-terminal domain AL468_14370 PF18269 T3SS EscN ATPase C-terminal domain AL468_14370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL468_14390 PF02154 Flagellar motor switch protein FliM AL468_14390 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AL468_14395 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AL468_14400 PF04347 Flagellar biosynthesis protein, FliO AL468_14405 PF00813 FliP family AL468_14410 PF01313 Bacterial export proteins, family 3 AL468_14415 PF01311 Bacterial export proteins, family 1 AL468_14420 PF01312 FlhB HrpN YscU SpaS Family AL468_14425 PF00771 FHIPEP family AL468_14430 PF00448 SRP54-type protein, GTPase domain AL468_14435 PF10609 NUBPL iron-transfer P-loop NTPase AL468_14440 PF04545 Sigma-70, region 4 AL468_14440 PF04539 Sigma-70 region 3 AL468_14440 PF04542 Sigma-70 region 2 AL468_14445 PF00072 Response regulator receiver domain AL468_14450 PF04344 Chemotaxis phosphatase, CheZ AL468_14455 PF01584 CheW-like domain AL468_14455 PF02895 Signal transducing histidine kinase, homodimeric domain AL468_14455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_14455 PF07194 P2 response regulator binding domain AL468_14455 PF01627 Hpt domain AL468_14460 PF00072 Response regulator receiver domain AL468_14460 PF01339 CheB methylesterase AL468_14465 PF13614 AAA domain AL468_14475 PF01584 CheW-like domain AL468_14485 PF00005 ABC transporter AL468_14490 PF03379 CcmB protein AL468_14495 PF01578 Cytochrome C assembly protein AL468_14500 PF04995 Heme exporter protein D (CcmD) AL468_14505 PF03100 CcmE AL468_14510 PF01578 Cytochrome C assembly protein AL468_14510 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AL468_14515 PF08534 Redoxin AL468_14520 PF03918 Cytochrome C biogenesis protein AL468_14525 PF03918 Cytochrome C biogenesis protein AL468_14530 PF04333 MlaA lipoprotein AL468_14535 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL468_14540 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL468_14550 PF08281 Sigma-70, region 4 AL468_14550 PF04542 Sigma-70 region 2 AL468_14555 PF02803 Thiolase, C-terminal domain AL468_14555 PF00108 Thiolase, N-terminal domain AL468_14560 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL468_14560 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL468_14560 PF00378 Enoyl-CoA hydratase/isomerase AL468_14570 PF16187 Middle or third domain of peptidase_M16 AL468_14570 PF05193 Peptidase M16 inactive domain AL468_14570 PF00675 Insulinase (Peptidase family M16) AL468_14575 PF00300 Histidine phosphatase superfamily (branch 1) AL468_14580 PF01713 Smr domain AL468_14585 PF05175 Methyltransferase small domain AL468_14590 PF01264 Chorismate synthase AL468_14595 PF03458 UPF0126 domain AL468_14605 PF04315 Elongation factor P hydroxylase AL468_14610 PF08891 YfcL protein AL468_14620 PF03358 NADPH-dependent FMN reductase AL468_14625 PF01266 FAD dependent oxidoreductase AL468_14625 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AL468_14630 PF02801 Beta-ketoacyl synthase, C-terminal domain AL468_14630 PF00109 Beta-ketoacyl synthase, N-terminal domain AL468_14640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL468_14640 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL468_14640 PF11890 Domain of unknown function (DUF3410) AL468_14645 PF01118 Semialdehyde dehydrogenase, NAD binding domain AL468_14645 PF02774 Semialdehyde dehydrogenase, dimerisation domain AL468_14655 PF01416 tRNA pseudouridine synthase AL468_14665 PF17848 Acetyl-coA carboxylase zinc finger domain AL468_14665 PF01039 Carboxyl transferase domain AL468_14670 PF08245 Mur ligase middle domain AL468_14670 PF02875 Mur ligase family, glutamate ligase domain AL468_14675 PF05036 Sporulation related domain AL468_14680 PF02674 Colicin V production protein AL468_14685 PF00156 Phosphoribosyl transferase domain AL468_14690 PF03466 LysR substrate binding domain AL468_14690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_14695 PF00072 Response regulator receiver domain AL468_14705 PF04304 Protein of unknown function (DUF454) AL468_14710 PF00156 Phosphoribosyl transferase domain AL468_14715 PF12170 DNA polymerase III tau subunit V interacting with alpha AL468_14715 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AL468_14715 PF12169 DNA polymerase III subunits gamma and tau domain III AL468_14720 PF02575 YbaB/EbfC DNA-binding family AL468_14725 PF13662 Toprim domain AL468_14725 PF02132 RecR protein AL468_14730 PF00230 Major intrinsic protein AL468_14740 PF01042 Endoribonuclease L-PSP AL468_14745 PF03313 Serine dehydratase alpha chain AL468_14755 PF03692 Putative zinc- or iron-chelating domain AL468_14760 PF04226 Transglycosylase associated protein AL468_14765 PF03692 Putative zinc- or iron-chelating domain AL468_14770 PF05552 Conserved TM helix AL468_14770 PF00924 Mechanosensitive ion channel AL468_14775 PF03992 Antibiotic biosynthesis monooxygenase AL468_14780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL468_14790 PF00245 Alkaline phosphatase AL468_14810 PF13847 Methyltransferase domain AL468_14815 PF08447 PAS fold AL468_14815 PF13426 PAS domain AL468_14815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL468_14820 PF01263 Aldose 1-epimerase AL468_14825 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL468_14825 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AL468_14830 PF01641 SelR domain AL468_14840 PF07023 Protein of unknown function (DUF1315) AL468_14845 PF17763 Glutaminase/Asparaginase C-terminal domain AL468_14845 PF00710 Asparaginase, N-terminal AL468_14850 PF01343 Peptidase family S49 AL468_14855 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL468_14855 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL468_14865 PF00881 Nitroreductase family AL468_14870 PF01131 DNA topoisomerase AL468_14870 PF01751 Toprim domain AL468_14880 PF00106 short chain dehydrogenase AL468_14885 PF00850 Histone deacetylase domain AL468_14895 PF00884 Sulfatase AL468_14895 PF11893 Domain of unknown function (DUF3413) AL468_14900 PF07208 Protein of unknown function (DUF1414) AL468_14905 PF04245 37-kD nucleoid-associated bacterial protein AL468_14920 PF03553 Na+/H+ antiporter family AL468_14925 PF02774 Semialdehyde dehydrogenase, dimerisation domain AL468_14925 PF01118 Semialdehyde dehydrogenase, NAD binding domain AL468_14930 PF00027 Cyclic nucleotide-binding domain AL468_14930 PF00520 Ion transport protein AL468_14935 PF01914 MarC family integral membrane protein AL468_14940 PF00465 Iron-containing alcohol dehydrogenase AL468_14940 PF00171 Aldehyde dehydrogenase family AL468_14955 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AL468_14955 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AL468_14960 PF00462 Glutaredoxin AL468_14965 PF02899 Phage integrase, N-terminal SAM-like domain AL468_14965 PF00589 Phage integrase family AL468_14995 PF06892 Phage regulatory protein CII (CP76) AL468_15195 PF03553 Na+/H+ antiporter family AL468_15195 PF13726 Na+-H+ antiporter family AL468_15200 PF00929 Exonuclease AL468_15210 PF18393 MotY N-terminal domain AL468_15210 PF00691 OmpA family AL468_15215 PF10952 Protein of unknown function (DUF2753) AL468_15220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL468_15225 PF00633 Helix-hairpin-helix motif AL468_15225 PF00730 HhH-GPD superfamily base excision DNA repair protein AL468_15225 PF10576 Iron-sulfur binding domain of endonuclease III AL468_15230 PF02508 Rnf-Nqr subunit, membrane protein AL468_15235 PF04205 FMN-binding domain AL468_15240 PF03116 NQR2, RnfD, RnfE family AL468_15245 PF13375 RnfC Barrel sandwich hybrid domain AL468_15245 PF12838 4Fe-4S dicluster domain AL468_15245 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AL468_15245 PF10531 SLBB domain AL468_15250 PF04060 Putative Fe-S cluster AL468_15255 PF02508 Rnf-Nqr subunit, membrane protein AL468_15270 PF17757 UvrB interaction domain AL468_15270 PF12344 Ultra-violet resistance protein B AL468_15270 PF04851 Type III restriction enzyme, res subunit AL468_15270 PF02151 UvrB/uvrC motif AL468_15270 PF00271 Helicase conserved C-terminal domain AL468_15275 PF02954 Bacterial regulatory protein, Fis family AL468_15275 PF00072 Response regulator receiver domain AL468_15275 PF00158 Sigma-54 interaction domain AL468_15280 PF01627 Hpt domain AL468_15285 PF01933 Uncharacterised protein family UPF0052 AL468_15290 PF06463 Molybdenum Cofactor Synthesis C AL468_15290 PF04055 Radical SAM superfamily AL468_15295 PF00994 Probable molybdopterin binding domain AL468_15300 PF01967 MoaC family AL468_15305 PF02597 ThiS family AL468_15310 PF02391 MoaE protein AL468_15315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL468_15320 PF00528 Binding-protein-dependent transport system inner membrane component AL468_15325 PF00528 Binding-protein-dependent transport system inner membrane component AL468_15325 PF12911 N-terminal TM domain of oligopeptide transport permease C AL468_15330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL468_15330 PF00005 ABC transporter AL468_15335 PF00005 ABC transporter AL468_15335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL468_15340 PF13409 Glutathione S-transferase, N-terminal domain AL468_15350 PF13194 Domain of unknown function (DUF4010) AL468_15355 PF07085 DRTGG domain AL468_15355 PF01515 Phosphate acetyl/butaryl transferase AL468_15360 PF00871 Acetokinase family AL468_15365 PF04217 Protein of unknown function, DUF412 AL468_15375 PF02653 Branched-chain amino acid transport system / permease component AL468_15380 PF00005 ABC transporter AL468_15385 PF00128 Alpha amylase, catalytic domain AL468_15385 PF02903 Alpha amylase, N-terminal ig-like domain AL468_15390 PF00990 Diguanylate cyclase, GGDEF domain AL468_15390 PF17158 Membrane-associated sensor, integral membrane domain AL468_15395 PF01207 Dihydrouridine synthase (Dus) AL468_15400 PF01043 SecA preprotein cross-linking domain AL468_15400 PF02810 SEC-C motif AL468_15400 PF07517 SecA DEAD-like domain AL468_15400 PF07516 SecA Wing and Scaffold domain AL468_15405 PF02600 Disulfide bond formation protein DsbB AL468_15410 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AL468_15415 PF07840 FadR C-terminal domain AL468_15415 PF00392 Bacterial regulatory proteins, gntR family AL468_15425 PF09334 tRNA synthetases class I (M) AL468_15425 PF01588 Putative tRNA binding domain AL468_15430 PF10609 NUBPL iron-transfer P-loop NTPase AL468_15435 PF00485 Phosphoribulokinase / Uridine kinase family AL468_15445 PF12557 Cob(I)alamin adenosyltransferase N terminal AL468_15445 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AL468_15450 PF01451 Low molecular weight phosphotyrosine protein phosphatase AL468_15455 PF00916 Sulfate permease family AL468_15455 PF01740 STAS domain AL468_15465 PF00575 S1 RNA binding domain AL468_15465 PF10150 Ribonuclease E/G family AL468_15465 PF12111 Polyribonucleotide phosphorylase C terminal AL468_15470 PF00849 RNA pseudouridylate synthase AL468_15470 PF01479 S4 domain AL468_15475 PF02545 Maf-like protein AL468_15480 PF02620 Large ribosomal RNA subunit accumulation protein YceD AL468_15485 PF01783 Ribosomal L32p protein family AL468_15490 PF02504 Fatty acid synthesis protein AL468_15495 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AL468_15495 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AL468_15500 PF00698 Acyl transferase domain AL468_15510 PF00550 Phosphopantetheine attachment site AL468_15515 PF02801 Beta-ketoacyl synthase, C-terminal domain AL468_15515 PF00109 Beta-ketoacyl synthase, N-terminal domain AL468_15520 PF01063 Amino-transferase class IV AL468_15525 PF02618 YceG-like family AL468_15530 PF02223 Thymidylate kinase AL468_15535 PF09115 DNA polymerase III, delta subunit, C terminal AL468_15540 PF01026 TatD related DNase AL468_15545 PF00367 phosphotransferase system, EIIB AL468_15545 PF02378 Phosphotransferase system, EIIC AL468_15555 PF00209 Sodium:neurotransmitter symporter family AL468_15570 PF01734 Patatin-like phospholipase AL468_15575 PF02887 Pyruvate kinase, alpha/beta domain AL468_15575 PF00224 Pyruvate kinase, barrel domain AL468_15580 PF00480 ROK family AL468_15585 PF00072 Response regulator receiver domain AL468_15585 PF01584 CheW-like domain AL468_15590 PF14579 Helix-hairpin-helix motif AL468_15590 PF02811 PHP domain AL468_15590 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AL468_15590 PF07733 Bacterial DNA polymerase III alpha NTPase domain AL468_15590 PF01336 OB-fold nucleic acid binding domain AL468_15605 PF00106 short chain dehydrogenase AL468_15610 PF01343 Peptidase family S49 AL468_15610 PF08496 Peptidase family S49 N-terminal AL468_15615 PF02224 Cytidylate kinase AL468_15620 PF00575 S1 RNA binding domain AL468_15625 PF00216 Bacterial DNA-binding protein AL468_15630 PF06305 Lipopolysaccharide assembly protein A domain AL468_15635 PF18073 Rubredoxin metal binding domain AL468_15640 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AL468_15645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL468_15660 PF02470 MlaD protein AL468_15665 PF04403 Paraquat-inducible protein A AL468_15670 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AL468_15675 PF00034 Cytochrome c AL468_15680 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL468_15680 PF00384 Molybdopterin oxidoreductase AL468_15680 PF01568 Molydopterin dinucleotide binding domain AL468_15685 PF03916 Polysulphide reductase, NrfD AL468_15690 PF13247 4Fe-4S dicluster domain AL468_15695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_15695 PF00512 His Kinase A (phospho-acceptor) domain AL468_15700 PF00072 Response regulator receiver domain AL468_15700 PF00196 Bacterial regulatory proteins, luxR family AL468_15710 PF02683 Cytochrome C biogenesis protein transmembrane region AL468_15710 PF11412 Disulphide bond corrector protein DsbC AL468_15715 PF00085 Thioredoxin AL468_15730 PF05958 tRNA (Uracil-5-)-methyltransferase AL468_15730 PF01938 TRAM domain AL468_15745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL468_15755 PF12704 MacB-like periplasmic core domain AL468_15755 PF02687 FtsX-like permease family AL468_15755 PF00005 ABC transporter AL468_15760 PF00005 ABC transporter AL468_15760 PF02687 FtsX-like permease family AL468_15760 PF12704 MacB-like periplasmic core domain AL468_15765 PF12704 MacB-like periplasmic core domain AL468_15765 PF02687 FtsX-like permease family AL468_15765 PF00005 ABC transporter AL468_15785 PF08267 Cobalamin-independent synthase, N-terminal domain AL468_15785 PF01717 Cobalamin-independent synthase, Catalytic domain AL468_15795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL468_15795 PF00529 HlyD membrane-fusion protein of T1SS AL468_15800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_15800 PF03466 LysR substrate binding domain AL468_15820 PF00512 His Kinase A (phospho-acceptor) domain AL468_15820 PF00672 HAMP domain AL468_15820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_15825 PF00072 Response regulator receiver domain AL468_15825 PF00486 Transcriptional regulatory protein, C terminal AL468_15835 PF00672 HAMP domain AL468_15835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL468_15850 PF04055 Radical SAM superfamily AL468_15850 PF11842 Domain of unknown function (DUF3362) AL468_15850 PF08497 Radical SAM N-terminal AL468_15855 PF08448 PAS fold AL468_15855 PF08447 PAS fold AL468_15855 PF00563 EAL domain AL468_15855 PF00990 Diguanylate cyclase, GGDEF domain AL468_15870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_15870 PF03466 LysR substrate binding domain AL468_15875 PF08267 Cobalamin-independent synthase, N-terminal domain AL468_15875 PF01717 Cobalamin-independent synthase, Catalytic domain AL468_15885 PF03795 YCII-related domain AL468_15890 PF03061 Thioesterase superfamily AL468_15895 PF04279 Intracellular septation protein A AL468_15905 PF00072 Response regulator receiver domain AL468_15905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_15910 PF17327 Acyl homoserine lactone synthase AL468_15915 PF00375 Sodium:dicarboxylate symporter family AL468_15925 PF13193 AMP-binding enzyme C-terminal domain AL468_15925 PF00501 AMP-binding enzyme AL468_15930 PF00027 Cyclic nucleotide-binding domain AL468_15930 PF13545 Crp-like helix-turn-helix domain AL468_15935 PF00290 Tryptophan synthase alpha chain AL468_15940 PF00291 Pyridoxal-phosphate dependent enzyme AL468_15945 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AL468_15945 PF00218 Indole-3-glycerol phosphate synthase AL468_15950 PF00591 Glycosyl transferase family, a/b domain AL468_15950 PF02885 Glycosyl transferase family, helical bundle domain AL468_15955 PF00117 Glutamine amidotransferase class-I AL468_15960 PF00425 chorismate binding enzyme AL468_15960 PF04715 Anthranilate synthase component I, N terminal region AL468_15965 PF08056 Tryptophan operon leader peptide AL468_15970 PF02811 PHP domain AL468_15975 PF01300 Telomere recombination AL468_15985 PF00849 RNA pseudouridylate synthase AL468_15985 PF01479 S4 domain AL468_15990 PF04269 Protein of unknown function, DUF440 AL468_15995 PF01132 Elongation factor P (EF-P) OB domain AL468_15995 PF08207 Elongation factor P (EF-P) KOW-like domain AL468_15995 PF09285 Elongation factor P, C-terminal AL468_16005 PF00136 DNA polymerase family B AL468_16005 PF03104 DNA polymerase family B, exonuclease domain AL468_16010 PF00196 Bacterial regulatory proteins, luxR family AL468_16010 PF00072 Response regulator receiver domain AL468_16015 PF08459 UvrC Helix-hairpin-helix N-terminal AL468_16015 PF02151 UvrB/uvrC motif AL468_16015 PF01541 GIY-YIG catalytic domain AL468_16020 PF01066 CDP-alcohol phosphatidyltransferase AL468_16045 PF00202 Aminotransferase class-III AL468_16050 PF16653 Saccharopine dehydrogenase C-terminal domain AL468_16050 PF03435 Saccharopine dehydrogenase NADP binding domain AL468_16055 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AL468_16070 PF00994 Probable molybdopterin binding domain AL468_16080 PF00268 Ribonucleotide reductase, small chain AL468_16085 PF00317 Ribonucleotide reductase, all-alpha domain AL468_16085 PF02867 Ribonucleotide reductase, barrel domain AL468_16085 PF03477 ATP cone domain AL468_16095 PF03989 DNA gyrase C-terminal domain, beta-propeller AL468_16095 PF00521 DNA gyrase/topoisomerase IV, subunit A AL468_16110 PF02335 Cytochrome c552 AL468_16120 PF13247 4Fe-4S dicluster domain AL468_16125 PF03916 Polysulphide reductase, NrfD AL468_16130 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AL468_16130 PF01578 Cytochrome C assembly protein AL468_16135 PF08534 Redoxin AL468_16140 PF03918 Cytochrome C biogenesis protein AL468_16150 PF00925 GTP cyclohydrolase II AL468_16175 PF03734 L,D-transpeptidase catalytic domain AL468_16175 PF01471 Putative peptidoglycan binding domain AL468_16180 PF05951 Bacterial protein of unknown function (DUF882) AL468_16185 PF00753 Metallo-beta-lactamase superfamily AL468_16200 PF03480 Bacterial extracellular solute-binding protein, family 7 AL468_16210 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL468_16215 PF17200 Single Cache domain 2 AL468_16215 PF07730 Histidine kinase AL468_16220 PF00072 Response regulator receiver domain AL468_16220 PF00196 Bacterial regulatory proteins, luxR family AL468_16230 PF02028 BCCT, betaine/carnitine/choline family transporter AL468_16235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL468_16235 PF00672 HAMP domain AL468_16255 PF00128 Alpha amylase, catalytic domain AL468_16260 PF13411 MerR HTH family regulatory protein AL468_16265 PF02627 Carboxymuconolactone decarboxylase family AL468_16275 PF04151 Bacterial pre-peptidase C-terminal domain AL468_16275 PF08453 Peptidase family M9 N-terminal AL468_16275 PF01752 Collagenase AL468_16285 PF01039 Carboxyl transferase domain AL468_16285 PF17848 Acetyl-coA carboxylase zinc finger domain AL468_16290 PF03466 LysR substrate binding domain AL468_16290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_16295 PF02743 Cache domain AL468_16295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL468_16295 PF00672 HAMP domain AL468_16305 PF03824 High-affinity nickel-transport protein AL468_16310 PF02583 Metal-sensitive transcriptional repressor AL468_16315 PF02447 GntP family permease AL468_16320 PF01370 NAD dependent epimerase/dehydratase family AL468_16325 PF01261 Xylose isomerase-like TIM barrel AL468_16330 PF00596 Class II Aldolase and Adducin N-terminal domain AL468_16335 PF07005 Sugar-binding N-terminal domain AL468_16335 PF17042 Nucleotide-binding C-terminal domain AL468_16340 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AL468_16340 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL468_16345 PF00455 DeoR C terminal sensor domain AL468_16345 PF08220 DeoR-like helix-turn-helix domain AL468_16360 PF00072 Response regulator receiver domain AL468_16360 PF01584 CheW-like domain AL468_16370 PF01243 Pyridoxamine 5'-phosphate oxidase AL468_16375 PF06228 Haem utilisation ChuX/HutX AL468_16380 PF04055 Radical SAM superfamily AL468_16385 PF03544 Gram-negative bacterial TonB protein C-terminal AL468_16390 PF01618 MotA/TolQ/ExbB proton channel family AL468_16395 PF02472 Biopolymer transport protein ExbD/TolR AL468_16405 PF01032 FecCD transport family AL468_16410 PF00005 ABC transporter AL468_16450 PF01467 Cytidylyltransferase-like AL468_16455 PF02540 NAD synthase AL468_16460 PF00111 2Fe-2S iron-sulfur cluster binding domain AL468_16460 PF03476 MOSC N-terminal beta barrel domain AL468_16460 PF03473 MOSC domain AL468_16460 PF00111 2Fe-2S iron-sulfur cluster binding domain AL468_16460 PF03473 MOSC domain AL468_16460 PF03476 MOSC N-terminal beta barrel domain AL468_16465 PF01679 Proteolipid membrane potential modulator AL468_16475 PF01979 Amidohydrolase family AL468_16480 PF05661 Protein of unknown function (DUF808) AL468_16510 PF00528 Binding-protein-dependent transport system inner membrane component AL468_16515 PF00528 Binding-protein-dependent transport system inner membrane component AL468_16515 PF14785 Maltose transport system permease protein MalF P2 domain AL468_16520 PF01547 Bacterial extracellular solute-binding protein AL468_16525 PF08402 TOBE domain AL468_16525 PF00005 ABC transporter AL468_16530 PF02397 Bacterial sugar transferase AL468_16545 PF13807 G-rich domain on putative tyrosine kinase AL468_16545 PF02706 Chain length determinant protein AL468_16545 PF13614 AAA domain AL468_16555 PF00534 Glycosyl transferases group 1 AL468_16555 PF13439 Glycosyltransferase Family 4 AL468_16590 PF16925 Tetracyclin repressor-like, C-terminal domain AL468_16590 PF00440 Bacterial regulatory proteins, tetR family AL468_16595 PF00107 Zinc-binding dehydrogenase AL468_16595 PF16884 N-terminal domain of oxidoreductase AL468_16600 PF13417 Glutathione S-transferase, N-terminal domain AL468_16605 PF00199 Catalase AL468_16605 PF06628 Catalase-related immune-responsive AL468_16610 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AL468_16610 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL468_16620 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL468_16630 PF12833 Helix-turn-helix domain AL468_16635 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL468_16635 PF02378 Phosphotransferase system, EIIC AL468_16635 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL468_16640 PF01238 Phosphomannose isomerase type I AL468_16650 PF18113 Rubredoxin binding C-terminal domain AL468_16650 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL468_16655 PF00753 Metallo-beta-lactamase superfamily AL468_16655 PF00301 Rubredoxin AL468_16655 PF00258 Flavodoxin AL468_16660 PF01590 GAF domain AL468_16660 PF00158 Sigma-54 interaction domain AL468_16665 PF13419 Haloacid dehalogenase-like hydrolase AL468_16670 PF00127 Copper binding proteins, plastocyanin/azurin family AL468_16675 PF02378 Phosphotransferase system, EIIC AL468_16685 PF01266 FAD dependent oxidoreductase AL468_16690 PF18113 Rubredoxin binding C-terminal domain AL468_16690 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL468_16700 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AL468_16700 PF00355 Rieske [2Fe-2S] domain AL468_16705 PF02028 BCCT, betaine/carnitine/choline family transporter AL468_16710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_16710 PF03466 LysR substrate binding domain AL468_16715 PF02386 Cation transport protein AL468_16720 PF02254 TrkA-N domain AL468_16720 PF02080 TrkA-C domain AL468_16725 PF00486 Transcriptional regulatory protein, C terminal AL468_16725 PF00072 Response regulator receiver domain AL468_16730 PF16736 Single Cache-like AL468_16730 PF00512 His Kinase A (phospho-acceptor) domain AL468_16730 PF00989 PAS fold AL468_16730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_16735 PF00664 ABC transporter transmembrane region AL468_16735 PF00005 ABC transporter AL468_16740 PF00593 TonB dependent receptor AL468_16740 PF07715 TonB-dependent Receptor Plug Domain AL468_16745 PF00005 ABC transporter AL468_16750 PF01497 Periplasmic binding protein AL468_16755 PF01032 FecCD transport family AL468_16765 PF00529 HlyD membrane-fusion protein of T1SS AL468_16770 PF00005 ABC transporter AL468_16770 PF00664 ABC transporter transmembrane region AL468_16780 PF00196 Bacterial regulatory proteins, luxR family AL468_16785 PF00196 Bacterial regulatory proteins, luxR family AL468_16795 PF02743 Cache domain AL468_16795 PF00672 HAMP domain AL468_16795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL468_16805 PF07726 ATPase family associated with various cellular activities (AAA) AL468_16805 PF17863 AAA lid domain AL468_16810 PF01882 Protein of unknown function DUF58 AL468_16820 PF13519 von Willebrand factor type A domain AL468_16825 PF13519 von Willebrand factor type A domain AL468_16840 PF00005 ABC transporter AL468_16845 PF00528 Binding-protein-dependent transport system inner membrane component AL468_16850 PF00528 Binding-protein-dependent transport system inner membrane component AL468_16855 PF12849 PBP superfamily domain AL468_16860 PF00672 HAMP domain AL468_16860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL468_16880 PF00593 TonB dependent receptor AL468_16880 PF07715 TonB-dependent Receptor Plug Domain AL468_16885 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AL468_16885 PF00326 Prolyl oligopeptidase family AL468_16890 PF00270 DEAD/DEAH box helicase AL468_16890 PF00271 Helicase conserved C-terminal domain AL468_16900 PF03734 L,D-transpeptidase catalytic domain AL468_16900 PF01476 LysM domain AL468_16900 PF17969 L,D-transpeptidase C-terminal domain AL468_16905 PF00875 DNA photolyase AL468_16905 PF03441 FAD binding domain of DNA photolyase AL468_16910 PF13411 MerR HTH family regulatory protein AL468_16915 PF08349 Protein of unknown function (DUF1722) AL468_16920 PF01048 Phosphorylase superfamily AL468_16935 PF00990 Diguanylate cyclase, GGDEF domain AL468_16940 PF11742 Protein of unknown function (DUF3302) AL468_16945 PF00529 HlyD membrane-fusion protein of T1SS AL468_16945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL468_16950 PF07155 ECF-type riboflavin transporter, S component AL468_16955 PF00005 ABC transporter AL468_16955 PF12558 ATP-binding cassette cobalt transporter AL468_16975 PF12837 4Fe-4S binding domain AL468_16975 PF12801 4Fe-4S binding domain AL468_16980 PF12838 4Fe-4S dicluster domain AL468_16980 PF12800 4Fe-4S binding domain AL468_16985 PF00583 Acetyltransferase (GNAT) family AL468_17000 PF12945 Flagellar protein YcgR AL468_17000 PF07238 PilZ domain AL468_17005 PF13609 Gram-negative porin AL468_17010 PF17200 Single Cache domain 2 AL468_17010 PF00672 HAMP domain AL468_17010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL468_17015 PF05362 Lon protease (S16) C-terminal proteolytic domain AL468_17015 PF13654 AAA domain AL468_17025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL468_17025 PF00005 ABC transporter AL468_17030 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AL468_17030 PF00326 Prolyl oligopeptidase family AL468_17035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_17035 PF03466 LysR substrate binding domain AL468_17040 PF02652 L-lactate permease AL468_17045 PF01070 FMN-dependent dehydrogenase AL468_17055 PF00924 Mechanosensitive ion channel AL468_17060 PF00194 Eukaryotic-type carbonic anhydrase AL468_17065 PF08240 Alcohol dehydrogenase GroES-like domain AL468_17065 PF00107 Zinc-binding dehydrogenase AL468_17070 PF00155 Aminotransferase class I and II AL468_17075 PF13188 PAS domain AL468_17075 PF03707 Bacterial signalling protein N terminal repeat AL468_17075 PF00563 EAL domain AL468_17075 PF00990 Diguanylate cyclase, GGDEF domain AL468_17080 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL468_17090 PF00080 Copper/zinc superoxide dismutase (SODC) AL468_17095 PF00512 His Kinase A (phospho-acceptor) domain AL468_17095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_17100 PF00072 Response regulator receiver domain AL468_17100 PF00486 Transcriptional regulatory protein, C terminal AL468_17120 PF03466 LysR substrate binding domain AL468_17120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_17125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL468_17155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_17155 PF03466 LysR substrate binding domain AL468_17170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL468_17170 PF18269 T3SS EscN ATPase C-terminal domain AL468_17180 PF14842 FliG N-terminal domain AL468_17180 PF14841 FliG middle domain AL468_17180 PF01706 FliG C-terminal domain AL468_17185 PF01514 Secretory protein of YscJ/FliF family AL468_17185 PF08345 Flagellar M-ring protein C-terminal AL468_17190 PF02049 Flagellar hook-basal body complex protein FliE AL468_17195 PF00072 Response regulator receiver domain AL468_17195 PF00158 Sigma-54 interaction domain AL468_17195 PF02954 Bacterial regulatory protein, Fis family AL468_17210 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AL468_17215 PF00813 FliP family AL468_17220 PF01313 Bacterial export proteins, family 3 AL468_17225 PF01311 Bacterial export proteins, family 1 AL468_17230 PF01312 FlhB HrpN YscU SpaS Family AL468_17235 PF00771 FHIPEP family AL468_17245 PF00669 Bacterial flagellin N-terminal helical region AL468_17245 PF00700 Bacterial flagellin C-terminal helical region AL468_17255 PF07195 Flagellar hook-associated protein 2 C-terminus AL468_17255 PF07196 Flagellin hook IN motif AL468_17255 PF02465 Flagellar hook-associated protein 2 N-terminus AL468_17260 PF02561 Flagellar protein FliS AL468_17275 PF03748 Flagellar basal body-associated protein FliL AL468_17280 PF04542 Sigma-70 region 2 AL468_17280 PF04545 Sigma-70, region 4 AL468_17285 PF01618 MotA/TolQ/ExbB proton channel family AL468_17290 PF00691 OmpA family AL468_17290 PF13677 Membrane MotB of proton-channel complex MotA/MotB AL468_17305 PF08000 Bacterial PH domain AL468_17350 PF04055 Radical SAM superfamily AL468_17355 PF00923 Transaldolase/Fructose-6-phosphate aldolase AL468_17365 PF00583 Acetyltransferase (GNAT) family AL468_17375 PF07690 Major Facilitator Superfamily AL468_17380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_17380 PF03466 LysR substrate binding domain AL468_17385 PF00892 EamA-like transporter family AL468_17410 PF13533 Biotin-lipoyl like AL468_17420 PF01594 AI-2E family transporter AL468_17425 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AL468_17430 PF00970 Oxidoreductase FAD-binding domain AL468_17430 PF00175 Oxidoreductase NAD-binding domain AL468_17440 PF09905 DNA-binding protein VF530 AL468_17445 PF03466 LysR substrate binding domain AL468_17445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_17455 PF00881 Nitroreductase family AL468_17460 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AL468_17460 PF12833 Helix-turn-helix domain AL468_17465 PF00128 Alpha amylase, catalytic domain AL468_17465 PF00686 Starch binding domain AL468_17470 PF00768 D-alanyl-D-alanine carboxypeptidase AL468_17470 PF07943 Penicillin-binding protein 5, C-terminal domain AL468_17475 PF00561 alpha/beta hydrolase fold AL468_17495 PF00875 DNA photolyase AL468_17495 PF03441 FAD binding domain of DNA photolyase AL468_17500 PF02469 Fasciclin domain AL468_17505 PF18416 N-acetylglucosamine binding protein domain 2 AL468_17505 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AL468_17510 PF01734 Patatin-like phospholipase AL468_17515 PF01914 MarC family integral membrane protein AL468_17520 PF00881 Nitroreductase family AL468_17530 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AL468_17530 PF10531 SLBB domain AL468_17530 PF02563 Polysaccharide biosynthesis/export protein AL468_17535 PF01451 Low molecular weight phosphotyrosine protein phosphatase AL468_17540 PF13614 AAA domain AL468_17540 PF13807 G-rich domain on putative tyrosine kinase AL468_17540 PF02706 Chain length determinant protein AL468_17550 PF00375 Sodium:dicarboxylate symporter family AL468_17555 PF06803 Protein of unknown function (DUF1232) AL468_17560 PF01546 Peptidase family M20/M25/M40 AL468_17560 PF07687 Peptidase dimerisation domain AL468_17565 PF07670 Nucleoside recognition AL468_17570 PF07670 Nucleoside recognition AL468_17585 PF00128 Alpha amylase, catalytic domain AL468_17590 PF00912 Transglycosylase AL468_17595 PF00128 Alpha amylase, catalytic domain AL468_17595 PF02806 Alpha amylase, C-terminal all-beta domain AL468_17595 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AL468_17600 PF02446 4-alpha-glucanotransferase AL468_17605 PF00343 Carbohydrate phosphorylase AL468_17615 PF17874 MalT-like TPR region AL468_17615 PF00196 Bacterial regulatory proteins, luxR family AL468_17630 PF02630 SCO1/SenC AL468_17635 PF00367 phosphotransferase system, EIIB AL468_17635 PF02378 Phosphotransferase system, EIIC AL468_17640 PF03193 RsgA GTPase AL468_17645 PF00375 Sodium:dicarboxylate symporter family AL468_17650 PF08543 Phosphomethylpyrimidine kinase AL468_17660 PF13520 Amino acid permease AL468_17665 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AL468_17665 PF01276 Orn/Lys/Arg decarboxylase, major domain AL468_17665 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AL468_17680 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AL468_17680 PF11852 Domain of unknown function (DUF3372) AL468_17680 PF18494 Pullulanase Ins domain AL468_17680 PF17967 Pullulanase N2 domain AL468_17680 PF03714 Bacterial pullanase-associated domain AL468_17685 PF04231 Endonuclease I AL468_17690 PF00128 Alpha amylase, catalytic domain AL468_17690 PF02903 Alpha amylase, N-terminal ig-like domain AL468_17690 PF16657 Maltogenic Amylase, C-terminal domain AL468_17705 PF02264 LamB porin AL468_17710 PF00128 Alpha amylase, catalytic domain AL468_17710 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AL468_17720 PF07690 Major Facilitator Superfamily AL468_17750 PF04225 Opacity-associated protein A LysM-like domain AL468_17750 PF01551 Peptidase family M23 AL468_17760 PF05193 Peptidase M16 inactive domain AL468_17760 PF00675 Insulinase (Peptidase family M16) AL468_17765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL468_17765 PF00672 HAMP domain AL468_17765 PF17200 Single Cache domain 2 AL468_17770 PF00005 ABC transporter AL468_17775 PF01032 FecCD transport family AL468_17780 PF01032 FecCD transport family AL468_17785 PF01497 Periplasmic binding protein AL468_17790 PF00593 TonB dependent receptor AL468_17790 PF07660 Secretin and TonB N terminus short domain AL468_17790 PF07715 TonB-dependent Receptor Plug Domain AL468_17795 PF00593 TonB dependent receptor AL468_17795 PF07715 TonB-dependent Receptor Plug Domain AL468_17800 PF02655 ATP-grasp domain AL468_17800 PF00206 Lyase AL468_17805 PF04183 IucA / IucC family AL468_17805 PF06276 Ferric iron reductase FhuF-like transporter AL468_17815 PF06276 Ferric iron reductase FhuF-like transporter AL468_17815 PF04183 IucA / IucC family AL468_17820 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AL468_17820 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AL468_17825 PF01547 Bacterial extracellular solute-binding protein AL468_17830 PF08521 Two-component sensor kinase N-terminal AL468_17830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_17830 PF00512 His Kinase A (phospho-acceptor) domain AL468_17835 PF00486 Transcriptional regulatory protein, C terminal AL468_17835 PF00072 Response regulator receiver domain AL468_17845 PF02378 Phosphotransferase system, EIIC AL468_17845 PF00367 phosphotransferase system, EIIB AL468_17870 PF00535 Glycosyl transferase family 2 AL468_17890 PF00005 ABC transporter AL468_17910 PF02566 OsmC-like protein AL468_17915 PF01047 MarR family AL468_17920 PF10417 C-terminal domain of 1-Cys peroxiredoxin AL468_17920 PF00578 AhpC/TSA family AL468_17925 PF13192 Thioredoxin domain AL468_17925 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL468_17940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_17940 PF03466 LysR substrate binding domain AL468_17945 PF12833 Helix-turn-helix domain AL468_17945 PF01965 DJ-1/PfpI family AL468_17950 PF08281 Sigma-70, region 4 AL468_17950 PF04542 Sigma-70 region 2 AL468_17970 PF03475 3-alpha domain AL468_17970 PF03473 MOSC domain AL468_17995 PF12833 Helix-turn-helix domain AL468_17995 PF06719 AraC-type transcriptional regulator N-terminus AL468_18005 PF00005 ABC transporter AL468_18005 PF00664 ABC transporter transmembrane region AL468_18015 PF01037 Lrp/AsnC ligand binding domain AL468_18025 PF13302 Acetyltransferase (GNAT) domain AL468_18040 PF00474 Sodium:solute symporter family AL468_18050 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AL468_18050 PF01619 Proline dehydrogenase AL468_18050 PF00171 Aldehyde dehydrogenase family AL468_18050 PF14850 DNA-binding domain of Proline dehydrogenase AL468_18055 PF12833 Helix-turn-helix domain AL468_18065 PF01243 Pyridoxamine 5'-phosphate oxidase AL468_18065 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AL468_18070 PF00512 His Kinase A (phospho-acceptor) domain AL468_18070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_18070 PF02743 Cache domain AL468_18075 PF00158 Sigma-54 interaction domain AL468_18075 PF00072 Response regulator receiver domain AL468_18075 PF02954 Bacterial regulatory protein, Fis family AL468_18080 PF00529 HlyD membrane-fusion protein of T1SS AL468_18095 PF00664 ABC transporter transmembrane region AL468_18095 PF03412 Peptidase C39 family AL468_18095 PF00005 ABC transporter AL468_18115 PF03358 NADPH-dependent FMN reductase AL468_18120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL468_18125 PF00246 Zinc carboxypeptidase AL468_18130 PF01380 SIS domain AL468_18130 PF01418 Helix-turn-helix domain, rpiR family AL468_18140 PF01380 SIS domain AL468_18145 PF00367 phosphotransferase system, EIIB AL468_18145 PF02378 Phosphotransferase system, EIIC AL468_18150 PF00267 Gram-negative porin AL468_18155 PF03575 Peptidase family S51 AL468_18160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_18160 PF03466 LysR substrate binding domain AL468_18165 PF00132 Bacterial transferase hexapeptide (six repeats) AL468_18175 PF13718 GNAT acetyltransferase 2 AL468_18175 PF05127 Helicase AL468_18180 PF08775 ParB family AL468_18180 PF02195 ParB-like nuclease domain AL468_18185 PF18607 ParA helix turn helix domain AL468_18185 PF13614 AAA domain AL468_18200 PF00005 ABC transporter AL468_18200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL468_18205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL468_18205 PF00005 ABC transporter AL468_18215 PF08719 Domain of unknown function (DUF1768) AL468_18215 PF00925 GTP cyclohydrolase II AL468_18225 PF17149 Periplasmic sensor domain found in signal transduction proteins AL468_18225 PF00072 Response regulator receiver domain AL468_18225 PF00512 His Kinase A (phospho-acceptor) domain AL468_18225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_18225 PF00672 HAMP domain AL468_18225 PF01627 Hpt domain AL468_18235 PF01709 Transcriptional regulator AL468_18240 PF01098 Cell cycle protein AL468_18250 PF00005 ABC transporter AL468_18270 PF07694 5TMR of 5TMR-LYT AL468_18270 PF06580 Histidine kinase AL468_18270 PF13492 GAF domain AL468_18270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_18275 PF04397 LytTr DNA-binding domain AL468_18275 PF00072 Response regulator receiver domain AL468_18285 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AL468_18290 PF17200 Single Cache domain 2 AL468_18290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL468_18290 PF00672 HAMP domain AL468_18305 PF03616 Sodium/glutamate symporter AL468_18315 PF00005 ABC transporter AL468_18320 PF00155 Aminotransferase class I and II AL468_18320 PF00392 Bacterial regulatory proteins, gntR family AL468_18325 PF03616 Sodium/glutamate symporter AL468_18335 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AL468_18350 PF03466 LysR substrate binding domain AL468_18350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_18355 PF02678 Pirin AL468_18355 PF17954 Quercetinase C-terminal cupin domain AL468_18360 PF07681 DoxX AL468_18370 PF00730 HhH-GPD superfamily base excision DNA repair protein AL468_18370 PF06029 AlkA N-terminal domain AL468_18375 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AL468_18375 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AL468_18385 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AL468_18395 PF03600 Citrate transporter AL468_18410 PF12697 Alpha/beta hydrolase family AL468_18415 PF00704 Glycosyl hydrolases family 18 AL468_18415 PF08329 Chitinase A, N-terminal domain AL468_18425 PF06865 Pyrimidine/purine nucleoside phosphorylase AL468_18435 PF00563 EAL domain AL468_18435 PF03707 Bacterial signalling protein N terminal repeat AL468_18435 PF00990 Diguanylate cyclase, GGDEF domain AL468_18440 PF01554 MatE AL468_18445 PF00849 RNA pseudouridylate synthase AL468_18460 PF03466 LysR substrate binding domain AL468_18460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_18475 PF00990 Diguanylate cyclase, GGDEF domain AL468_18475 PF17152 Periplasmic sensor domain AL468_18485 PF00756 Putative esterase AL468_18490 PF00107 Zinc-binding dehydrogenase AL468_18490 PF08240 Alcohol dehydrogenase GroES-like domain AL468_18495 PF00797 N-acetyltransferase AL468_18500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_18500 PF03466 LysR substrate binding domain AL468_18505 PF04954 Siderophore-interacting protein AL468_18505 PF08021 Siderophore-interacting FAD-binding domain AL468_18510 PF00326 Prolyl oligopeptidase family AL468_18515 PF01810 LysE type translocator AL468_18520 PF01037 Lrp/AsnC ligand binding domain AL468_18525 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AL468_18525 PF18416 N-acetylglucosamine binding protein domain 2 AL468_18540 PF13599 Pentapeptide repeats (9 copies) AL468_18545 PF03922 OmpW family AL468_18550 PF13533 Biotin-lipoyl like AL468_18555 PF07690 Major Facilitator Superfamily AL468_18565 PF12706 Beta-lactamase superfamily domain AL468_18575 PF01204 Trehalase AL468_18580 PF01661 Macro domain AL468_18585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL468_18590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_18590 PF03466 LysR substrate binding domain AL468_18635 PF12792 CSS motif domain associated with EAL AL468_18635 PF00563 EAL domain AL468_18670 PF00313 'Cold-shock' DNA-binding domain AL468_18675 PF00330 Aconitase family (aconitate hydratase) AL468_18675 PF00694 Aconitase C-terminal domain AL468_18680 PF06965 Na+/H+ antiporter 1 AL468_18690 PF12221 Bacterial membrane protein N terminal AL468_18690 PF01145 SPFH domain / Band 7 family AL468_18700 PF00313 'Cold-shock' DNA-binding domain AL468_18705 PF02386 Cation transport protein AL468_18710 PF02254 TrkA-N domain AL468_18710 PF02080 TrkA-C domain AL468_18715 PF02386 Cation transport protein AL468_18720 PF00486 Transcriptional regulatory protein, C terminal AL468_18720 PF00072 Response regulator receiver domain AL468_18725 PF02702 Osmosensitive K+ channel His kinase sensor domain AL468_18725 PF13493 Domain of unknown function (DUF4118) AL468_18725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_18725 PF00512 His Kinase A (phospho-acceptor) domain AL468_18730 PF00924 Mechanosensitive ion channel AL468_18730 PF05552 Conserved TM helix AL468_18735 PF02424 ApbE family AL468_18740 PF01699 Sodium/calcium exchanger protein AL468_18745 PF02673 Bacitracin resistance protein BacA AL468_18825 PF12833 Helix-turn-helix domain AL468_18825 PF01965 DJ-1/PfpI family AL468_18955 PF07690 Major Facilitator Superfamily AL468_18975 PF00501 AMP-binding enzyme AL468_18975 PF13193 AMP-binding enzyme C-terminal domain AL468_18975 PF00550 Phosphopantetheine attachment site AL468_18975 PF00668 Condensation domain AL468_18985 PF00550 Phosphopantetheine attachment site AL468_18995 PF00501 AMP-binding enzyme AL468_18995 PF00668 Condensation domain AL468_18995 PF08659 KR domain AL468_18995 PF00550 Phosphopantetheine attachment site AL468_18995 PF14765 Polyketide synthase dehydratase AL468_18995 PF00109 Beta-ketoacyl synthase, N-terminal domain AL468_18995 PF13193 AMP-binding enzyme C-terminal domain AL468_18995 PF02801 Beta-ketoacyl synthase, C-terminal domain AL468_18995 PF16197 Ketoacyl-synthetase C-terminal extension AL468_19000 PF00975 Thioesterase domain AL468_19000 PF00501 AMP-binding enzyme AL468_19000 PF13193 AMP-binding enzyme C-terminal domain AL468_19000 PF00550 Phosphopantetheine attachment site AL468_19000 PF00668 Condensation domain AL468_19010 PF00561 alpha/beta hydrolase fold AL468_19015 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AL468_19015 PF01648 4'-phosphopantetheinyl transferase superfamily AL468_19040 PF13495 Phage integrase, N-terminal SAM-like domain AL468_19040 PF00589 Phage integrase family AL468_19045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_19045 PF03466 LysR substrate binding domain AL468_19060 PF13419 Haloacid dehalogenase-like hydrolase AL468_19085 PF13556 PucR C-terminal helix-turn-helix domain AL468_19085 PF05651 Putative sugar diacid recognition AL468_19085 PF17853 GGDEF-like domain AL468_19090 PF02447 GntP family permease AL468_19095 PF02595 Glycerate kinase family AL468_19100 PF00155 Aminotransferase class I and II AL468_19100 PF00392 Bacterial regulatory proteins, gntR family AL468_19120 PF00583 Acetyltransferase (GNAT) family AL468_19140 PF13302 Acetyltransferase (GNAT) domain AL468_19145 PF03264 NapC/NirT cytochrome c family, N-terminal region AL468_19150 PF01568 Molydopterin dinucleotide binding domain AL468_19150 PF18364 Molybdopterin oxidoreductase N-terminal domain AL468_19150 PF00384 Molybdopterin oxidoreductase AL468_19160 PF02581 Thiamine monophosphate synthase AL468_19165 PF02110 Hydroxyethylthiazole kinase family AL468_19170 PF03070 TENA/THI-4/PQQC family AL468_19175 PF09084 NMT1/THI5 like AL468_19180 PF00528 Binding-protein-dependent transport system inner membrane component AL468_19185 PF00005 ABC transporter AL468_19190 PF08543 Phosphomethylpyrimidine kinase AL468_19195 PF01523 Putative modulator of DNA gyrase AL468_19200 PF01523 Putative modulator of DNA gyrase AL468_19205 PF04013 Putative SAM-dependent RNA methyltransferase AL468_19260 PF10928 Protein of unknown function (DUF2810) AL468_19265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL468_19265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL468_19275 PF03009 Glycerophosphoryl diester phosphodiesterase family AL468_19285 PF00486 Transcriptional regulatory protein, C terminal AL468_19285 PF00072 Response regulator receiver domain AL468_19290 PF00672 HAMP domain AL468_19290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_19290 PF00512 His Kinase A (phospho-acceptor) domain AL468_19290 PF16750 Sensor domain of 2-component histidine kinase AL468_19295 PF07715 TonB-dependent Receptor Plug Domain AL468_19295 PF00593 TonB dependent receptor AL468_19305 PF01618 MotA/TolQ/ExbB proton channel family AL468_19310 PF01618 MotA/TolQ/ExbB proton channel family AL468_19315 PF02472 Biopolymer transport protein ExbD/TolR AL468_19360 PF01297 Zinc-uptake complex component A periplasmic AL468_19365 PF00005 ABC transporter AL468_19370 PF00950 ABC 3 transport family AL468_19385 PF00326 Prolyl oligopeptidase family AL468_19385 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AL468_19390 PF07690 Major Facilitator Superfamily AL468_19395 PF00491 Arginase family AL468_19400 PF17810 Arginine decarboxylase helical bundle domain AL468_19400 PF17944 Arginine decarboxylase C-terminal helical extension AL468_19400 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AL468_19405 PF00753 Metallo-beta-lactamase superfamily AL468_19410 PF08443 RimK-like ATP-grasp domain AL468_19410 PF18030 RimK PreATP-grasp domain AL468_19415 PF08443 RimK-like ATP-grasp domain AL468_19415 PF18030 RimK PreATP-grasp domain AL468_19420 PF03466 LysR substrate binding domain AL468_19420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_19445 PF00232 Glycosyl hydrolase family 1 AL468_19455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_19455 PF00512 His Kinase A (phospho-acceptor) domain AL468_19460 PF02954 Bacterial regulatory protein, Fis family AL468_19460 PF00072 Response regulator receiver domain AL468_19460 PF00158 Sigma-54 interaction domain AL468_19465 PF00990 Diguanylate cyclase, GGDEF domain AL468_19470 PF05525 Branched-chain amino acid transport protein AL468_19490 PF01266 FAD dependent oxidoreductase AL468_19495 PF04229 GrpB protein AL468_19515 PF02322 Cytochrome bd terminal oxidase subunit II AL468_19520 PF01654 Cytochrome bd terminal oxidase subunit I AL468_19525 PF03116 NQR2, RnfD, RnfE family AL468_19530 PF01212 Beta-eliminating lyase AL468_19550 PF01773 Na+ dependent nucleoside transporter N-terminus AL468_19550 PF07662 Na+ dependent nucleoside transporter C-terminus AL468_19550 PF07670 Nucleoside recognition AL468_19565 PF05230 MASE2 domain AL468_19565 PF00990 Diguanylate cyclase, GGDEF domain AL468_19580 PF00990 Diguanylate cyclase, GGDEF domain AL468_19585 PF03441 FAD binding domain of DNA photolyase AL468_19585 PF00875 DNA photolyase AL468_19590 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AL468_19605 PF01625 Peptide methionine sulfoxide reductase AL468_19605 PF01641 SelR domain AL468_19610 PF02566 OsmC-like protein AL468_19615 PF12464 Maltose acetyltransferase AL468_19615 PF14602 Hexapeptide repeat of succinyl-transferase AL468_19650 PF03466 LysR substrate binding domain AL468_19650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_19655 PF13419 Haloacid dehalogenase-like hydrolase AL468_19670 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AL468_19675 PF00194 Eukaryotic-type carbonic anhydrase AL468_19680 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL468_19690 PF00657 GDSL-like Lipase/Acylhydrolase AL468_19705 PF03611 PTS system sugar-specific permease component AL468_19715 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL468_19720 PF00356 Bacterial regulatory proteins, lacI family AL468_19725 PF13419 Haloacid dehalogenase-like hydrolase AL468_19735 PF00266 Aminotransferase class-V AL468_19745 PF00005 ABC transporter AL468_19750 PF00528 Binding-protein-dependent transport system inner membrane component AL468_19755 PF07702 UTRA domain AL468_19755 PF00392 Bacterial regulatory proteins, gntR family AL468_19770 PF04393 Protein of unknown function (DUF535) AL468_19780 PF01266 FAD dependent oxidoreductase AL468_19785 PF00246 Zinc carboxypeptidase AL468_19785 PF18027 Cytosolic carboxypeptidase N-terminal domain AL468_19790 PF00691 OmpA family AL468_19790 PF01389 OmpA-like transmembrane domain AL468_19795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_19795 PF03466 LysR substrate binding domain AL468_19805 PF03466 LysR substrate binding domain AL468_19805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_19815 PF00854 POT family AL468_19820 PF03313 Serine dehydratase alpha chain AL468_19820 PF03315 Serine dehydratase beta chain AL468_19840 PF08264 Anticodon-binding domain of tRNA AL468_19840 PF00133 tRNA synthetases class I (I, L, M and V) AL468_19845 PF01464 Transglycosylase SLT domain AL468_19865 PF00460 Flagella basal body rod protein AL468_19870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL468_19870 PF00460 Flagella basal body rod protein AL468_19875 PF13861 FlgD Tudor-like domain AL468_19875 PF03963 Flagellar hook capping protein - N-terminal region AL468_19875 PF13860 FlgD Ig-like domain AL468_19880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL468_19880 PF00460 Flagella basal body rod protein AL468_19880 PF07559 Flagellar basal body protein FlaE AL468_19885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL468_19885 PF00460 Flagella basal body rod protein AL468_19890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL468_19890 PF00460 Flagella basal body rod protein AL468_19895 PF02107 Flagellar L-ring protein AL468_19900 PF02119 Flagellar P-ring protein AL468_19905 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AL468_19905 PF10135 Rod binding protein AL468_19910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL468_19910 PF00460 Flagella basal body rod protein AL468_19915 PF00669 Bacterial flagellin N-terminal helical region AL468_19935 PF01070 FMN-dependent dehydrogenase AL468_19950 PF00581 Rhodanese-like domain AL468_19955 PF00166 Chaperonin 10 Kd subunit AL468_19960 PF00118 TCP-1/cpn60 chaperonin family AL468_19990 PF08359 YsiA-like protein, C-terminal region AL468_19990 PF00440 Bacterial regulatory proteins, tetR family AL468_19995 PF12833 Helix-turn-helix domain AL468_20000 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AL468_20005 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AL468_20010 PF13520 Amino acid permease AL468_20015 PF03060 Nitronate monooxygenase AL468_20020 PF17678 Glycosyl hydrolase family 92 N-terminal domain AL468_20020 PF07971 Glycosyl hydrolase family 92 AL468_20025 PF07971 Glycosyl hydrolase family 92 AL468_20025 PF17678 Glycosyl hydrolase family 92 N-terminal domain AL468_20035 PF17678 Glycosyl hydrolase family 92 N-terminal domain AL468_20035 PF07971 Glycosyl hydrolase family 92 AL468_20040 PF07971 Glycosyl hydrolase family 92 AL468_20040 PF17678 Glycosyl hydrolase family 92 N-terminal domain AL468_20055 PF01625 Peptide methionine sulfoxide reductase AL468_20055 PF01641 SelR domain AL468_20060 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL468_20065 PF08220 DeoR-like helix-turn-helix domain AL468_20065 PF00455 DeoR C terminal sensor domain AL468_20075 PF00857 Isochorismatase family AL468_20085 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AL468_20085 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AL468_20110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_20110 PF03466 LysR substrate binding domain AL468_20125 PF06629 MltA-interacting protein MipA AL468_20130 PF17185 NlpE C-terminal OB domain AL468_20130 PF04170 NlpE N-terminal domain AL468_20135 PF00005 ABC transporter AL468_20135 PF00571 CBS domain AL468_20140 PF00528 Binding-protein-dependent transport system inner membrane component AL468_20150 PF02001 Protein of unknown function DUF134 AL468_20175 PF00679 Elongation factor G C-terminus AL468_20175 PF14492 Elongation Factor G, domain II AL468_20175 PF03764 Elongation factor G, domain IV AL468_20175 PF03144 Elongation factor Tu domain 2 AL468_20175 PF00009 Elongation factor Tu GTP binding domain AL468_20185 PF13378 Enolase C-terminal domain-like AL468_20185 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AL468_20195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_20195 PF03466 LysR substrate binding domain AL468_20210 PF00376 MerR family regulatory protein AL468_20210 PF09278 MerR, DNA binding AL468_20235 PF13091 PLD-like domain AL468_20245 PF00873 AcrB/AcrD/AcrF family AL468_20265 PF00005 ABC transporter AL468_20265 PF08402 TOBE domain AL468_20290 PF00392 Bacterial regulatory proteins, gntR family AL468_20290 PF07702 UTRA domain AL468_20295 PF02028 BCCT, betaine/carnitine/choline family transporter AL468_20300 PF00703 Glycosyl hydrolases family 2 AL468_20300 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AL468_20300 PF02837 Glycosyl hydrolases family 2, sugar binding domain AL468_20300 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AL468_20315 PF00873 AcrB/AcrD/AcrF family AL468_20320 PF13533 Biotin-lipoyl like AL468_20325 PF03466 LysR substrate binding domain AL468_20325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_20335 PF00579 tRNA synthetases class I (W and Y) AL468_20340 PF00072 Response regulator receiver domain AL468_20340 PF00196 Bacterial regulatory proteins, luxR family AL468_20350 PF00391 PEP-utilising enzyme, mobile domain AL468_20350 PF02896 PEP-utilising enzyme, TIM barrel domain AL468_20350 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AL468_20355 PF03618 Kinase/pyrophosphorylase AL468_20360 PF17763 Glutaminase/Asparaginase C-terminal domain AL468_20360 PF00710 Asparaginase, N-terminal AL468_20370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_20370 PF03466 LysR substrate binding domain AL468_20380 PF01810 LysE type translocator AL468_20385 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AL468_20395 PF02423 Ornithine cyclodeaminase/mu-crystallin family AL468_20400 PF00291 Pyridoxal-phosphate dependent enzyme AL468_20405 PF00202 Aminotransferase class-III AL468_20410 PF00171 Aldehyde dehydrogenase family AL468_20415 PF01037 Lrp/AsnC ligand binding domain AL468_20420 PF03480 Bacterial extracellular solute-binding protein, family 7 AL468_20425 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AL468_20430 PF01321 Creatinase/Prolidase N-terminal domain AL468_20430 PF00557 Metallopeptidase family M24 AL468_20435 PF00392 Bacterial regulatory proteins, gntR family AL468_20435 PF00155 Aminotransferase class I and II AL468_20440 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AL468_20445 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL468_20450 PF12833 Helix-turn-helix domain AL468_20465 PF00107 Zinc-binding dehydrogenase AL468_20465 PF08240 Alcohol dehydrogenase GroES-like domain AL468_20470 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL468_20480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_20480 PF03466 LysR substrate binding domain AL468_20485 PF03466 LysR substrate binding domain AL468_20485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_20495 PF00271 Helicase conserved C-terminal domain AL468_20495 PF00270 DEAD/DEAH box helicase AL468_20505 PF00535 Glycosyl transferase family 2 AL468_20535 PF00155 Aminotransferase class I and II AL468_20540 PF01497 Periplasmic binding protein AL468_20540 PF12833 Helix-turn-helix domain AL468_20590 PF11471 Maltoporin periplasmic N-terminal extension AL468_20590 PF02264 LamB porin AL468_20595 PF00356 Bacterial regulatory proteins, lacI family AL468_20600 PF00367 phosphotransferase system, EIIB AL468_20600 PF02378 Phosphotransferase system, EIIC AL468_20605 PF00294 pfkB family carbohydrate kinase AL468_20610 PF00251 Glycosyl hydrolases family 32 N-terminal domain AL468_20610 PF08244 Glycosyl hydrolases family 32 C terminal AL468_20620 PF02798 Glutathione S-transferase, N-terminal domain AL468_20630 PF00768 D-alanyl-D-alanine carboxypeptidase AL468_20630 PF07943 Penicillin-binding protein 5, C-terminal domain AL468_20640 PF00462 Glutaredoxin AL468_20640 PF08534 Redoxin AL468_20645 PF00962 Adenosine/AMP deaminase AL468_20660 PF00313 'Cold-shock' DNA-binding domain AL468_20665 PF02678 Pirin AL468_20665 PF05726 Pirin C-terminal cupin domain AL468_20670 PF01734 Patatin-like phospholipase AL468_20685 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AL468_20690 PF00884 Sulfatase AL468_20690 PF08019 Phosphoethanolamine transferase EptA/EptB AL468_20695 PF01219 Prokaryotic diacylglycerol kinase AL468_20705 PF16527 Two-component sensor protein CpxA, periplasmic domain AL468_20705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_20705 PF00672 HAMP domain AL468_20705 PF00512 His Kinase A (phospho-acceptor) domain AL468_20710 PF00072 Response regulator receiver domain AL468_20710 PF00486 Transcriptional regulatory protein, C terminal AL468_20725 PF01323 DSBA-like thioredoxin domain AL468_20740 PF00255 Glutathione peroxidase AL468_20745 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AL468_20755 PF07690 Major Facilitator Superfamily AL468_20770 PF01966 HD domain AL468_20775 PF07969 Amidohydrolase family AL468_20780 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AL468_20785 PF00571 CBS domain AL468_20785 PF01769 Divalent cation transporter AL468_20785 PF03448 MgtE intracellular N domain AL468_20790 PF03109 ABC1 family AL468_20795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL468_20795 PF00529 HlyD membrane-fusion protein of T1SS AL468_20820 PF00072 Response regulator receiver domain AL468_20820 PF00486 Transcriptional regulatory protein, C terminal AL468_20825 PF16527 Two-component sensor protein CpxA, periplasmic domain AL468_20825 PF00672 HAMP domain AL468_20825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_20825 PF00512 His Kinase A (phospho-acceptor) domain AL468_20835 PF00155 Aminotransferase class I and II AL468_20835 PF00392 Bacterial regulatory proteins, gntR family AL468_20840 PF13520 Amino acid permease AL468_20855 PF03466 LysR substrate binding domain AL468_20855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_20875 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AL468_20875 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL468_20880 PF00512 His Kinase A (phospho-acceptor) domain AL468_20880 PF00072 Response regulator receiver domain AL468_20880 PF00672 HAMP domain AL468_20880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_20880 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL468_20880 PF01627 Hpt domain AL468_20885 PF01554 MatE AL468_20890 PF04363 Protein of unknown function (DUF496) AL468_20900 PF04337 Protein of unknown function, DUF480 AL468_20905 PF01541 GIY-YIG catalytic domain AL468_20915 PF13407 Periplasmic binding protein domain AL468_20920 PF00512 His Kinase A (phospho-acceptor) domain AL468_20920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_20920 PF00072 Response regulator receiver domain AL468_20920 PF09308 LuxQ, periplasmic AL468_20930 PF00529 HlyD membrane-fusion protein of T1SS AL468_20930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL468_20950 PF01037 Lrp/AsnC ligand binding domain AL468_20980 PF13721 SecD export protein N-terminal TM region AL468_20980 PF02355 Protein export membrane protein AL468_20980 PF07549 SecD/SecF GG Motif AL468_20985 PF02355 Protein export membrane protein AL468_20985 PF07549 SecD/SecF GG Motif AL468_20995 PF01810 LysE type translocator AL468_21000 PF00106 short chain dehydrogenase AL468_21005 PF00108 Thiolase, N-terminal domain AL468_21005 PF02803 Thiolase, C-terminal domain AL468_21015 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AL468_21025 PF03264 NapC/NirT cytochrome c family, N-terminal region AL468_21030 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AL468_21035 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL468_21035 PF01568 Molydopterin dinucleotide binding domain AL468_21035 PF00384 Molybdopterin oxidoreductase AL468_21045 PF12838 4Fe-4S dicluster domain AL468_21045 PF13187 4Fe-4S dicluster domain AL468_21050 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AL468_21050 PF07730 Histidine kinase AL468_21050 PF00672 HAMP domain AL468_21050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_21055 PF00072 Response regulator receiver domain AL468_21055 PF00196 Bacterial regulatory proteins, luxR family AL468_21070 PF07687 Peptidase dimerisation domain AL468_21070 PF01546 Peptidase family M20/M25/M40 AL468_21075 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AL468_21080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL468_21085 PF00873 AcrB/AcrD/AcrF family AL468_21090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL468_21090 PF00672 HAMP domain AL468_21090 PF12729 Four helix bundle sensory module for signal transduction AL468_21095 PF00472 RF-1 domain AL468_21100 PF13419 Haloacid dehalogenase-like hydrolase AL468_21105 PF00691 OmpA family AL468_21105 PF01389 OmpA-like transmembrane domain AL468_21115 PF00793 DAHP synthetase I family AL468_21120 PF07690 Major Facilitator Superfamily AL468_21125 PF08447 PAS fold AL468_21125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL468_21130 PF00456 Transketolase, thiamine diphosphate binding domain AL468_21130 PF02780 Transketolase, C-terminal domain AL468_21130 PF02779 Transketolase, pyrimidine binding domain AL468_21135 PF00923 Transaldolase/Fructose-6-phosphate aldolase AL468_21155 PF00704 Glycosyl hydrolases family 18 AL468_21155 PF08329 Chitinase A, N-terminal domain AL468_21160 PF00563 EAL domain AL468_21160 PF03707 Bacterial signalling protein N terminal repeat AL468_21160 PF00990 Diguanylate cyclase, GGDEF domain AL468_21165 PF00581 Rhodanese-like domain AL468_21185 PF00899 ThiF family AL468_21190 PF03453 MoeA N-terminal region (domain I and II) AL468_21190 PF03454 MoeA C-terminal region (domain IV) AL468_21190 PF00994 Probable molybdopterin binding domain AL468_21195 PF01227 GTP cyclohydrolase I AL468_21200 PF01566 Natural resistance-associated macrophage protein AL468_21210 PF00654 Voltage gated chloride channel AL468_21225 PF00248 Aldo/keto reductase family AL468_21230 PF00072 Response regulator receiver domain AL468_21240 PF01256 Carbohydrate kinase AL468_21240 PF03853 YjeF-related protein N-terminus AL468_21245 PF00478 IMP dehydrogenase / GMP reductase domain AL468_21250 PF00392 Bacterial regulatory proteins, gntR family AL468_21255 PF00144 Beta-lactamase AL468_21260 PF00132 Bacterial transferase hexapeptide (six repeats) AL468_21265 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL468_21270 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AL468_21270 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AL468_21270 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AL468_21275 PF03466 LysR substrate binding domain AL468_21275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_21280 PF01476 LysM domain AL468_21280 PF08525 Opacity-associated protein A N-terminal motif AL468_21280 PF01551 Peptidase family M23 AL468_21305 PF02954 Bacterial regulatory protein, Fis family AL468_21305 PF00158 Sigma-54 interaction domain AL468_21310 PF17871 AAA lid domain AL468_21310 PF00004 ATPase family associated with various cellular activities (AAA) AL468_21310 PF07724 AAA domain (Cdc48 subfamily) AL468_21310 PF10431 C-terminal, D2-small domain, of ClpB protein AL468_21315 PF05638 Type VI secretion system effector, Hcp AL468_21320 PF04717 Type VI secretion system, phage-baseplate injector AL468_21345 PF00069 Protein kinase domain AL468_21380 PF01037 Lrp/AsnC ligand binding domain AL468_21450 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AL468_21455 PF07690 Major Facilitator Superfamily AL468_21465 PF03466 LysR substrate binding domain AL468_21465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_21470 PF00106 short chain dehydrogenase AL468_21475 PF00582 Universal stress protein family AL468_21485 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AL468_21485 PF13244 Domain of unknown function (DUF4040) AL468_21485 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AL468_21485 PF00361 Proton-conducting membrane transporter AL468_21505 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AL468_21510 PF03334 Na+/H+ antiporter subunit AL468_21515 PF13193 AMP-binding enzyme C-terminal domain AL468_21515 PF00501 AMP-binding enzyme AL468_21520 PF01012 Electron transfer flavoprotein domain AL468_21520 PF00766 Electron transfer flavoprotein FAD-binding domain AL468_21525 PF01012 Electron transfer flavoprotein domain AL468_21540 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL468_21540 PF00005 ABC transporter AL468_21565 PF00005 ABC transporter AL468_21570 PF00501 AMP-binding enzyme AL468_21570 PF14535 AMP-binding enzyme C-terminal domain AL468_21600 PF02028 BCCT, betaine/carnitine/choline family transporter AL468_21605 PF00106 short chain dehydrogenase AL468_21610 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL468_21610 PF00205 Thiamine pyrophosphate enzyme, central domain AL468_21610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL468_21615 PF03306 Alpha-acetolactate decarboxylase AL468_21620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_21620 PF03466 LysR substrate binding domain AL468_21625 PF13419 Haloacid dehalogenase-like hydrolase AL468_21630 PF02567 Phenazine biosynthesis-like protein AL468_21640 PF02322 Cytochrome bd terminal oxidase subunit II AL468_21645 PF01654 Cytochrome bd terminal oxidase subunit I AL468_21650 PF00155 Aminotransferase class I and II AL468_21650 PF00392 Bacterial regulatory proteins, gntR family AL468_21670 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL468_21670 PF00672 HAMP domain AL468_21670 PF01627 Hpt domain AL468_21670 PF00512 His Kinase A (phospho-acceptor) domain AL468_21670 PF00072 Response regulator receiver domain AL468_21670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_21675 PF00682 HMGL-like AL468_21680 PF00289 Biotin carboxylase, N-terminal domain AL468_21680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AL468_21680 PF00364 Biotin-requiring enzyme AL468_21680 PF02785 Biotin carboxylase C-terminal domain AL468_21685 PF00378 Enoyl-CoA hydratase/isomerase AL468_21690 PF01039 Carboxyl transferase domain AL468_21695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL468_21695 PF02770 Acyl-CoA dehydrogenase, middle domain AL468_21695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL468_21700 PF00376 MerR family regulatory protein AL468_21700 PF09278 MerR, DNA binding AL468_21705 PF00108 Thiolase, N-terminal domain AL468_21705 PF02803 Thiolase, C-terminal domain AL468_21710 PF00171 Aldehyde dehydrogenase family AL468_21715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL468_21715 PF02770 Acyl-CoA dehydrogenase, middle domain AL468_21715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL468_21720 PF00378 Enoyl-CoA hydratase/isomerase AL468_21730 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL468_21730 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AL468_21740 PF00990 Diguanylate cyclase, GGDEF domain AL468_21740 PF00072 Response regulator receiver domain AL468_21745 PF00440 Bacterial regulatory proteins, tetR family AL468_21745 PF13977 BetI-type transcriptional repressor, C-terminal AL468_21750 PF00171 Aldehyde dehydrogenase family AL468_21755 PF00732 GMC oxidoreductase AL468_21755 PF05199 GMC oxidoreductase AL468_21760 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AL468_21765 PF00528 Binding-protein-dependent transport system inner membrane component AL468_21770 PF00005 ABC transporter AL468_21770 PF00571 CBS domain AL468_21775 PF00881 Nitroreductase family AL468_21785 PF16200 C-terminal region of band_7 AL468_21785 PF01145 SPFH domain / Band 7 family AL468_21795 PF00563 EAL domain AL468_21795 PF03707 Bacterial signalling protein N terminal repeat AL468_21795 PF13188 PAS domain AL468_21795 PF00990 Diguanylate cyclase, GGDEF domain AL468_21800 PF00034 Cytochrome c AL468_21800 PF03150 Di-haem cytochrome c peroxidase AL468_21805 PF09308 LuxQ, periplasmic AL468_21805 PF00072 Response regulator receiver domain AL468_21805 PF00512 His Kinase A (phospho-acceptor) domain AL468_21805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_21815 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AL468_21815 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AL468_21825 PF04116 Fatty acid hydroxylase superfamily AL468_21865 PF00563 EAL domain AL468_21865 PF00990 Diguanylate cyclase, GGDEF domain AL468_21870 PF05025 RbsD / FucU transport protein family AL468_21875 PF00005 ABC transporter AL468_21880 PF02653 Branched-chain amino acid transport system / permease component AL468_21885 PF13407 Periplasmic binding protein domain AL468_21890 PF00294 pfkB family carbohydrate kinase AL468_21895 PF00356 Bacterial regulatory proteins, lacI family AL468_21905 PF04973 Nicotinamide mononucleotide transporter AL468_21910 PF01048 Phosphorylase superfamily AL468_21920 PF01497 Periplasmic binding protein AL468_21925 PF01032 FecCD transport family AL468_21930 PF01032 FecCD transport family AL468_21935 PF00005 ABC transporter AL468_21940 PF13411 MerR HTH family regulatory protein AL468_21945 PF12833 Helix-turn-helix domain AL468_21950 PF00593 TonB dependent receptor AL468_21950 PF07715 TonB-dependent Receptor Plug Domain AL468_21980 PF12805 FUSC-like inner membrane protein yccS AL468_21985 PF00580 UvrD/REP helicase N-terminal domain AL468_21985 PF12462 DNA helicase IV / RNA helicase N terminal AL468_21985 PF13361 UvrD-like helicase C-terminal domain AL468_21990 PF02142 MGS-like domain AL468_21995 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AL468_22000 PF00672 HAMP domain AL468_22000 PF00512 His Kinase A (phospho-acceptor) domain AL468_22000 PF01627 Hpt domain AL468_22000 PF00072 Response regulator receiver domain AL468_22000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_22015 PF00486 Transcriptional regulatory protein, C terminal AL468_22015 PF00072 Response regulator receiver domain AL468_22020 PF00884 Sulfatase AL468_22025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_22025 PF03466 LysR substrate binding domain AL468_22030 PF00884 Sulfatase AL468_22030 PF16385 Domain of unknown function AL468_22035 PF04055 Radical SAM superfamily AL468_22035 PF13186 Iron-sulfur cluster-binding domain AL468_22040 PF17863 AAA lid domain AL468_22040 PF07726 ATPase family associated with various cellular activities (AAA) AL468_22055 PF00092 von Willebrand factor type A domain AL468_22070 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AL468_22075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_22075 PF03466 LysR substrate binding domain AL468_22080 PF00781 Diacylglycerol kinase catalytic domain AL468_22085 PF04076 Bacterial OB fold (BOF) protein AL468_22095 PF18081 Fanconi anemia-associated nuclease SAP domain AL468_22095 PF08774 VRR-NUC domain AL468_22110 PF01435 Peptidase family M48 AL468_22115 PF04011 LemA family AL468_22120 PF03606 C4-dicarboxylate anaerobic carrier AL468_22130 PF00814 Glycoprotease family AL468_22130 PF00583 Acetyltransferase (GNAT) family AL468_22140 PF00072 Response regulator receiver domain AL468_22140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_22145 PF00155 Aminotransferase class I and II AL468_22150 PF01926 50S ribosome-binding GTPase AL468_22155 PF03707 Bacterial signalling protein N terminal repeat AL468_22155 PF00563 EAL domain AL468_22155 PF13188 PAS domain AL468_22155 PF00990 Diguanylate cyclase, GGDEF domain AL468_22160 PF00990 Diguanylate cyclase, GGDEF domain AL468_22160 PF08448 PAS fold AL468_22170 PF00196 Bacterial regulatory proteins, luxR family AL468_22170 PF00072 Response regulator receiver domain AL468_22175 PF00072 Response regulator receiver domain AL468_22175 PF01584 CheW-like domain AL468_22180 PF08334 Type II secretion system (T2SS), protein G AL468_22180 PF07963 Prokaryotic N-terminal methylation motif AL468_22190 PF00892 EamA-like transporter family AL468_22215 PF01447 Thermolysin metallopeptidase, catalytic domain AL468_22215 PF03413 Peptidase propeptide and YPEB domain AL468_22215 PF07504 Fungalysin/Thermolysin Propeptide Motif AL468_22215 PF04151 Bacterial pre-peptidase C-terminal domain AL468_22215 PF02868 Thermolysin metallopeptidase, alpha-helical domain AL468_22220 PF00893 Small Multidrug Resistance protein AL468_22225 PF00892 EamA-like transporter family AL468_22240 PF00171 Aldehyde dehydrogenase family AL468_22250 PF01645 Conserved region in glutamate synthase AL468_22250 PF13187 4Fe-4S dicluster domain AL468_22255 PF00141 Peroxidase AL468_22270 PF01757 Acyltransferase family AL468_22280 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL468_22285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL468_22305 PF00571 CBS domain AL468_22305 PF01769 Divalent cation transporter AL468_22305 PF03448 MgtE intracellular N domain AL468_22335 PF01327 Polypeptide deformylase AL468_22340 PF00376 MerR family regulatory protein AL468_22340 PF09278 MerR, DNA binding AL468_22350 PF02253 Phospholipase A1 AL468_22370 PF00005 ABC transporter AL468_22370 PF00664 ABC transporter transmembrane region AL468_22375 PF07733 Bacterial DNA polymerase III alpha NTPase domain AL468_22375 PF11490 DNA polymerase III polC-type N-terminus II AL468_22375 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AL468_22375 PF14579 Helix-hairpin-helix motif AL468_22375 PF02811 PHP domain AL468_22375 PF00929 Exonuclease AL468_22410 PF02347 Glycine cleavage system P-protein AL468_22415 PF01597 Glycine cleavage H-protein AL468_22420 PF00464 Serine hydroxymethyltransferase AL468_22430 PF01571 Aminomethyltransferase folate-binding domain AL468_22430 PF08669 Glycine cleavage T-protein C-terminal barrel domain AL468_22440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL468_22450 PF00873 AcrB/AcrD/AcrF family AL468_22460 PF02378 Phosphotransferase system, EIIC AL468_22460 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL468_22465 PF00294 pfkB family carbohydrate kinase AL468_22470 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL468_22470 PF00381 PTS HPr component phosphorylation site AL468_22475 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AL468_22475 PF00356 Bacterial regulatory proteins, lacI family AL468_22490 PF00989 PAS fold AL468_22490 PF00563 EAL domain AL468_22490 PF00990 Diguanylate cyclase, GGDEF domain AL468_22490 PF01590 GAF domain AL468_22495 PF00528 Binding-protein-dependent transport system inner membrane component AL468_22500 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL468_22505 PF00528 Binding-protein-dependent transport system inner membrane component AL468_22510 PF00005 ABC transporter AL468_22520 PF00465 Iron-containing alcohol dehydrogenase AL468_22525 PF12833 Helix-turn-helix domain AL468_22525 PF06719 AraC-type transcriptional regulator N-terminus AL468_22535 PF00704 Glycosyl hydrolases family 18 AL468_22535 PF06483 Chitinase C AL468_22540 PF00483 Nucleotidyl transferase AL468_22545 PF01268 Formate--tetrahydrofolate ligase AL468_22550 PF00294 pfkB family carbohydrate kinase AL468_22565 PF13419 Haloacid dehalogenase-like hydrolase AL468_22585 PF04336 Acyl carrier protein phosphodiesterase AL468_22590 PF00271 Helicase conserved C-terminal domain AL468_22590 PF00270 DEAD/DEAH box helicase AL468_22595 PF00563 EAL domain AL468_22595 PF12792 CSS motif domain associated with EAL AL468_22610 PF01292 Prokaryotic cytochrome b561 AL468_22615 PF04264 YceI-like domain AL468_22620 PF01226 Formate/nitrite transporter AL468_22630 PF03466 LysR substrate binding domain AL468_22630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_22635 PF06496 Protein of unknown function (DUF1097) AL468_22640 PF11398 Protein of unknown function (DUF2813) AL468_22645 PF02872 5'-nucleotidase, C-terminal domain AL468_22645 PF00149 Calcineurin-like phosphoesterase AL468_22650 PF03741 Integral membrane protein TerC family AL468_22670 PF12262 Bacterial virulence factor lipase N-terminal AL468_22675 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL468_22690 PF03061 Thioesterase superfamily AL468_22700 PF12793 Sugar transport-related sRNA regulator N-term AL468_22700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL468_22725 PF01556 DnaJ C terminal domain AL468_22725 PF00226 DnaJ domain AL468_22725 PF00684 DnaJ central domain AL468_22735 PF00990 Diguanylate cyclase, GGDEF domain AL468_22735 PF00498 FHA domain AL468_22735 PF00563 EAL domain AL468_22740 PF07055 Enoyl reductase FAD binding domain AL468_22740 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AL468_22740 PF12241 Trans-2-enoyl-CoA reductase catalytic region AL468_22745 PF13472 GDSL-like Lipase/Acylhydrolase family AL468_22750 PF00005 ABC transporter AL468_22765 PF02626 Carboxyltransferase domain, subdomain A and B AL468_22770 PF02682 Carboxyltransferase domain, subdomain C and D AL468_22775 PF03746 LamB/YcsF family AL468_22780 PF08447 PAS fold AL468_22780 PF13426 PAS domain AL468_22780 PF05231 MASE1 AL468_22780 PF00990 Diguanylate cyclase, GGDEF domain AL468_22780 PF08448 PAS fold AL468_22780 PF00563 EAL domain AL468_22785 PF16363 GDP-mannose 4,6 dehydratase AL468_22795 PF07715 TonB-dependent Receptor Plug Domain AL468_22795 PF00593 TonB dependent receptor AL468_22795 PF04886 PT repeat AL468_22800 PF03466 LysR substrate binding domain AL468_22800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_22805 PF13607 Succinyl-CoA ligase like flavodoxin domain AL468_22805 PF13380 CoA binding domain AL468_22805 PF00583 Acetyltransferase (GNAT) family AL468_22810 PF05036 Sporulation related domain AL468_22815 PF07478 D-ala D-ala ligase C-terminus AL468_22815 PF01820 D-ala D-ala ligase N-terminus AL468_22825 PF01253 Translation initiation factor SUI1 AL468_22875 PF05707 Zonular occludens toxin (Zot) AL468_22905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_22905 PF03466 LysR substrate binding domain AL468_22915 PF00582 Universal stress protein family AL468_22920 PF03701 Uncharacterised protein family (UPF0181) AL468_22935 PF00072 Response regulator receiver domain AL468_22935 PF00486 Transcriptional regulatory protein, C terminal AL468_22945 PF02233 NAD(P) transhydrogenase beta subunit AL468_22950 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AL468_22950 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AL468_22950 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AL468_22965 PF00990 Diguanylate cyclase, GGDEF domain AL468_22965 PF00072 Response regulator receiver domain AL468_22975 PF00563 EAL domain AL468_22975 PF01590 GAF domain AL468_22975 PF00990 Diguanylate cyclase, GGDEF domain AL468_22975 PF00360 Phytochrome region AL468_22985 PF03459 TOBE domain AL468_22985 PF00005 ABC transporter AL468_22990 PF00528 Binding-protein-dependent transport system inner membrane component AL468_23000 PF07685 CobB/CobQ-like glutamine amidotransferase domain AL468_23000 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AL468_23005 PF04076 Bacterial OB fold (BOF) protein AL468_23015 PF08443 RimK-like ATP-grasp domain AL468_23015 PF18030 RimK PreATP-grasp domain AL468_23020 PF00155 Aminotransferase class I and II AL468_23025 PF12833 Helix-turn-helix domain AL468_23025 PF12852 Cupin AL468_23030 PF01554 MatE AL468_23040 PF03477 ATP cone domain AL468_23040 PF13597 Anaerobic ribonucleoside-triphosphate reductase AL468_23050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL468_23055 PF00873 AcrB/AcrD/AcrF family AL468_23065 PF04143 Sulphur transport AL468_23085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL468_23085 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL468_23160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL468_23160 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL468_23165 PF01177 Asp/Glu/Hydantoin racemase AL468_23170 PF02567 Phenazine biosynthesis-like protein AL468_23180 PF00384 Molybdopterin oxidoreductase AL468_23190 PF03466 LysR substrate binding domain AL468_23190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_23195 PF02634 FdhD/NarQ family AL468_23200 PF07690 Major Facilitator Superfamily AL468_23205 PF00072 Response regulator receiver domain AL468_23205 PF00196 Bacterial regulatory proteins, luxR family AL468_23210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL468_23210 PF07730 Histidine kinase AL468_23210 PF05231 MASE1 AL468_23215 PF07690 Major Facilitator Superfamily AL468_23220 PF01238 Phosphomannose isomerase type I AL468_23240 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AL468_23240 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AL468_23245 PF00085 Thioredoxin AL468_23250 PF07690 Major Facilitator Superfamily AL468_23255 PF11756 Nitrous oxide-stimulated promoter AL468_23270 PF00593 TonB dependent receptor AL468_23270 PF07715 TonB-dependent Receptor Plug Domain AL468_23285 PF03605 Anaerobic c4-dicarboxylate membrane transporter AL468_23300 PF10414 Sirohaem synthase dimerisation region AL468_23300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL468_23300 PF14824 Sirohaem biosynthesis protein central AL468_23305 PF01226 Formate/nitrite transporter AL468_23310 PF13806 Rieske-like [2Fe-2S] domain AL468_23315 PF18267 Rubredoxin NAD+ reductase C-terminal domain AL468_23315 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AL468_23315 PF04324 BFD-like [2Fe-2S] binding domain AL468_23315 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL468_23315 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AL468_23320 PF14760 Rnk N-terminus AL468_23320 PF01272 Transcription elongation factor, GreA/GreB, C-term AL468_23330 PF00990 Diguanylate cyclase, GGDEF domain AL468_23330 PF13426 PAS domain AL468_23330 PF00563 EAL domain AL468_23385 PF00128 Alpha amylase, catalytic domain AL468_23385 PF09154 Domain of unknown function (DUF1939) AL468_23405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL468_23405 PF00672 HAMP domain AL468_23410 PF00842 Alanine racemase, C-terminal domain AL468_23410 PF01168 Alanine racemase, N-terminal domain AL468_23425 PF03466 LysR substrate binding domain AL468_23425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_23430 PF14031 Putative serine dehydratase domain AL468_23430 PF01168 Alanine racemase, N-terminal domain AL468_23435 PF02423 Ornithine cyclodeaminase/mu-crystallin family AL468_23445 PF09330 D-lactate dehydrogenase, membrane binding AL468_23445 PF01565 FAD binding domain AL468_23450 PF03466 LysR substrate binding domain AL468_23450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_23465 PF05762 VWA domain containing CoxE-like protein AL468_23470 PF07728 AAA domain (dynein-related subfamily) AL468_23470 PF17868 AAA lid domain AL468_23470 PF12592 Protein of unknown function (DUF3763) AL468_23480 PF01212 Beta-eliminating lyase AL468_23485 PF00034 Cytochrome c AL468_23490 PF03606 C4-dicarboxylate anaerobic carrier AL468_23500 PF08212 Lipocalin-like domain AL468_23510 PF13476 AAA domain AL468_23515 PF00149 Calcineurin-like phosphoesterase AL468_23515 PF12320 Type 5 capsule protein repressor C-terminal domain AL468_23530 PF04717 Type VI secretion system, phage-baseplate injector AL468_23530 PF16671 Actin cross-linking domain AL468_23540 PF10431 C-terminal, D2-small domain, of ClpB protein AL468_23540 PF17871 AAA lid domain AL468_23540 PF00004 ATPase family associated with various cellular activities (AAA) AL468_23540 PF07724 AAA domain (Cdc48 subfamily) AL468_23600 PF13677 Membrane MotB of proton-channel complex MotA/MotB AL468_23600 PF00691 OmpA family AL468_23620 PF03793 PASTA domain AL468_23620 PF00069 Protein kinase domain AL468_23640 PF00072 Response regulator receiver domain AL468_23640 PF00211 Adenylate and Guanylate cyclase catalytic domain AL468_23655 PF08361 MAATS-type transcriptional repressor, C-terminal region AL468_23655 PF00440 Bacterial regulatory proteins, tetR family AL468_23670 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AL468_23670 PF04324 BFD-like [2Fe-2S] binding domain AL468_23670 PF13806 Rieske-like [2Fe-2S] domain AL468_23670 PF18267 Rubredoxin NAD+ reductase C-terminal domain AL468_23670 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL468_23670 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AL468_23675 PF00005 ABC transporter AL468_23680 PF00528 Binding-protein-dependent transport system inner membrane component AL468_23685 PF00005 ABC transporter AL468_23695 PF03861 ANTAR domain AL468_23695 PF00072 Response regulator receiver domain AL468_23700 PF01738 Dienelactone hydrolase family AL468_23705 PF00591 Glycosyl transferase family, a/b domain AL468_23705 PF02885 Glycosyl transferase family, helical bundle domain AL468_23710 PF10414 Sirohaem synthase dimerisation region AL468_23710 PF14824 Sirohaem biosynthesis protein central AL468_23710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL468_23715 PF00384 Molybdopterin oxidoreductase AL468_23715 PF01568 Molydopterin dinucleotide binding domain AL468_23715 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL468_23725 PF03222 Tryptophan/tyrosine permease family AL468_23735 PF07694 5TMR of 5TMR-LYT AL468_23735 PF00990 Diguanylate cyclase, GGDEF domain AL468_23745 PF01483 Proprotein convertase P-domain AL468_23745 PF00082 Subtilase family AL468_23765 PF00072 Response regulator receiver domain AL468_23765 PF00486 Transcriptional regulatory protein, C terminal AL468_23785 PF04314 Copper chaperone PCu(A)C AL468_23790 PF00012 Hsp70 protein AL468_23805 PF00676 Dehydrogenase E1 component AL468_23810 PF02780 Transketolase, C-terminal domain AL468_23810 PF02779 Transketolase, pyrimidine binding domain AL468_23815 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AL468_23815 PF00364 Biotin-requiring enzyme AL468_23815 PF02817 e3 binding domain AL468_23820 PF00766 Electron transfer flavoprotein FAD-binding domain AL468_23820 PF01012 Electron transfer flavoprotein domain AL468_23840 PF00691 OmpA family AL468_23840 PF01389 OmpA-like transmembrane domain AL468_23860 PF00528 Binding-protein-dependent transport system inner membrane component AL468_23865 PF00528 Binding-protein-dependent transport system inner membrane component AL468_23870 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL468_23875 PF00005 ABC transporter AL468_23905 PF02028 BCCT, betaine/carnitine/choline family transporter AL468_23915 PF00171 Aldehyde dehydrogenase family AL468_23930 PF08031 Berberine and berberine like AL468_23930 PF01565 FAD binding domain AL468_23935 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL468_23935 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL468_23945 PF01040 UbiA prenyltransferase family AL468_23955 PF00510 Cytochrome c oxidase subunit III AL468_23960 PF00115 Cytochrome C and Quinol oxidase polypeptide I AL468_23965 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AL468_23965 PF06481 COX Aromatic Rich Motif AL468_23975 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL468_23975 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AL468_23980 PF00378 Enoyl-CoA hydratase/isomerase AL468_23985 PF00378 Enoyl-CoA hydratase/isomerase AL468_23995 PF00171 Aldehyde dehydrogenase family AL468_24000 PF00108 Thiolase, N-terminal domain AL468_24000 PF02803 Thiolase, C-terminal domain AL468_24005 PF09278 MerR, DNA binding AL468_24005 PF00376 MerR family regulatory protein AL468_24010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL468_24010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL468_24010 PF02770 Acyl-CoA dehydrogenase, middle domain AL468_24015 PF01039 Carboxyl transferase domain AL468_24020 PF00378 Enoyl-CoA hydratase/isomerase AL468_24025 PF00682 HMGL-like AL468_24030 PF10063 Uncharacterized integral membrane protein (DUF2301) AL468_24040 PF02913 FAD linked oxidases, C-terminal domain AL468_24040 PF01565 FAD binding domain AL468_24040 PF13183 4Fe-4S dicluster domain AL468_24045 PF04909 Amidohydrolase AL468_24050 PF00561 alpha/beta hydrolase fold AL468_24055 PF12833 Helix-turn-helix domain AL468_24055 PF01965 DJ-1/PfpI family AL468_24070 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AL468_24075 PF00528 Binding-protein-dependent transport system inner membrane component AL468_24080 PF00571 CBS domain AL468_24080 PF00005 ABC transporter AL468_24085 PF00528 Binding-protein-dependent transport system inner membrane component AL468_24090 PF08447 PAS fold AL468_24090 PF13426 PAS domain AL468_24090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL468_24095 PF00871 Acetokinase family AL468_24105 PF00563 EAL domain AL468_24105 PF00990 Diguanylate cyclase, GGDEF domain AL468_24105 PF03707 Bacterial signalling protein N terminal repeat AL468_24110 PF00270 DEAD/DEAH box helicase AL468_24110 PF00271 Helicase conserved C-terminal domain AL468_24110 PF03880 DbpA RNA binding domain AL468_24115 PF00575 S1 RNA binding domain AL468_24115 PF00773 RNB domain AL468_24115 PF08206 Ribonuclease B OB domain AL468_24120 PF12833 Helix-turn-helix domain AL468_24130 PF12849 PBP superfamily domain AL468_24145 PF08447 PAS fold AL468_24145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL468_24150 PF00005 ABC transporter AL468_24155 PF12792 CSS motif domain associated with EAL AL468_24155 PF00563 EAL domain AL468_24175 PF00270 DEAD/DEAH box helicase AL468_24175 PF00271 Helicase conserved C-terminal domain AL468_24180 PF02492 CobW/HypB/UreG, nucleotide-binding domain AL468_24180 PF07683 Cobalamin synthesis protein cobW C-terminal domain AL468_24190 PF01470 Pyroglutamyl peptidase AL468_24200 PF00313 'Cold-shock' DNA-binding domain AL468_24205 PF08461 Ribonuclease R winged-helix domain AL468_24205 PF17876 Cold shock domain AL468_24205 PF00575 S1 RNA binding domain AL468_24205 PF08206 Ribonuclease B OB domain AL468_24205 PF00773 RNB domain AL468_24210 PF00291 Pyridoxal-phosphate dependent enzyme AL468_24220 PF09905 DNA-binding protein VF530 AL468_24225 PF00271 Helicase conserved C-terminal domain AL468_24225 PF00270 DEAD/DEAH box helicase AL468_24235 PF01925 Sulfite exporter TauE/SafE AL468_24260 PF04151 Bacterial pre-peptidase C-terminal domain AL468_24260 PF00082 Subtilase family AL468_24260 PF05922 Peptidase inhibitor I9 AL468_24280 PF12843 Putative quorum-sensing-regulated virulence factor AL468_24300 PF01329 Pterin 4 alpha carbinolamine dehydratase AL468_24305 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AL468_24310 PF00501 AMP-binding enzyme AL468_24310 PF13193 AMP-binding enzyme C-terminal domain AL468_24320 PF03466 LysR substrate binding domain AL468_24320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_24330 PF00892 EamA-like transporter family AL468_24345 PF00465 Iron-containing alcohol dehydrogenase AL468_24350 PF07995 Glucose / Sorbosone dehydrogenase AL468_24360 PF00210 Ferritin-like domain AL468_24365 PF00672 HAMP domain AL468_24365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL468_24365 PF17200 Single Cache domain 2 AL468_24375 PF00005 ABC transporter AL468_24375 PF02687 FtsX-like permease family AL468_24375 PF12704 MacB-like periplasmic core domain AL468_24380 PF12704 MacB-like periplasmic core domain AL468_24380 PF02687 FtsX-like permease family AL468_24380 PF00005 ABC transporter AL468_24395 PF00990 Diguanylate cyclase, GGDEF domain AL468_24400 PF03889 Alternative ribosome-rescue factor A AL468_24405 PF00313 'Cold-shock' DNA-binding domain AL468_24425 PF13488 Glycine zipper AL468_24425 PF00691 OmpA family AL468_24435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL468_24435 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AL468_24440 PF01040 UbiA prenyltransferase family AL468_24445 PF02628 Cytochrome oxidase assembly protein AL468_24465 PF00510 Cytochrome c oxidase subunit III AL468_24470 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AL468_24475 PF00115 Cytochrome C and Quinol oxidase polypeptide I AL468_24480 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AL468_24480 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AL468_24485 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL468_24485 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL468_24485 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL468_24485 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL468_24495 PF01810 LysE type translocator AL468_24500 PF12833 Helix-turn-helix domain AL468_24515 PF01557 Fumarylacetoacetate (FAA) hydrolase family AL468_24535 PF00892 EamA-like transporter family AL468_24540 PF00462 Glutaredoxin AL468_24555 PF07690 Major Facilitator Superfamily AL468_24560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL468_24560 PF03466 LysR substrate binding domain AL468_24565 PF00990 Diguanylate cyclase, GGDEF domain AL468_24565 PF08448 PAS fold AL468_24565 PF08447 PAS fold AL468_24565 PF00563 EAL domain AL468_24570 PF01551 Peptidase family M23 AL468_24570 PF08525 Opacity-associated protein A N-terminal motif AL468_24570 PF01476 LysM domain AL468_24600 PF02743 Cache domain AL468_24600 PF00672 HAMP domain AL468_24600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL468_24610 PF03222 Tryptophan/tyrosine permease family AL468_24640 PF00107 Zinc-binding dehydrogenase AL468_24640 PF08240 Alcohol dehydrogenase GroES-like domain AL468_24645 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL468_24645 PF02378 Phosphotransferase system, EIIC AL468_24650 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL468_24670 PF01758 Sodium Bile acid symporter family AL468_24680 PF01161 Phosphatidylethanolamine-binding protein AL468_24685 PF02567 Phenazine biosynthesis-like protein AL468_24690 PF10282 Lactonase, 7-bladed beta-propeller AL468_24700 PF00005 ABC transporter AL468_24745 PF00873 AcrB/AcrD/AcrF family AL468_24765 PF00990 Diguanylate cyclase, GGDEF domain AL468_24765 PF17151 Periplasmic sensor domain AL468_24775 PF13302 Acetyltransferase (GNAT) domain AL468_24785 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL468_24790 PF00873 AcrB/AcrD/AcrF family AL468_24795 PF13533 Biotin-lipoyl like AL468_24805 PF00326 Prolyl oligopeptidase family AL468_24805 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AL468_24810 PF00005 ABC transporter AL468_24810 PF16326 ABC transporter C-terminal domain AL468_24810 PF12848 ABC transporter AL468_24815 PF00582 Universal stress protein family AL468_24820 PF02525 Flavodoxin-like fold AL468_24825 PF02254 TrkA-N domain AL468_24825 PF00999 Sodium/hydrogen exchanger family