locus-tag class description HOO69_00065 PF00999 Sodium/hydrogen exchanger family HOO69_00070 PF02310 B12 binding domain HOO69_00070 PF00809 Pterin binding enzyme HOO69_00070 PF02574 Homocysteine S-methyltransferase HOO69_00070 PF02607 B12 binding domain HOO69_00070 PF02965 Vitamin B12 dependent methionine synthase, activation domain HOO69_00075 PF00571 CBS domain HOO69_00075 PF01769 Divalent cation transporter HOO69_00075 PF03448 MgtE intracellular N domain HOO69_00080 PF00381 PTS HPr component phosphorylation site HOO69_00085 PF03668 P-loop ATPase protein family HOO69_00090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HOO69_00095 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HOO69_00100 PF04963 Sigma-54 factor, core binding domain HOO69_00100 PF00309 Sigma-54 factor, Activator interacting domain (AID) HOO69_00100 PF04552 Sigma-54, DNA binding domain HOO69_00105 PF00005 ABC transporter HOO69_00105 PF12399 Branched-chain amino acid ATP-binding cassette transporter HOO69_00110 PF03968 OstA-like protein HOO69_00125 PF01380 SIS domain HOO69_00125 PF00571 CBS domain HOO69_00130 PF01699 Sodium/calcium exchanger protein HOO69_00135 PF00005 ABC transporter HOO69_00140 PF02405 Permease MlaE HOO69_00145 PF02470 MlaD protein HOO69_00150 PF05494 MlaC protein HOO69_00155 PF13466 STAS domain HOO69_00160 PF01722 BolA-like protein HOO69_00165 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HOO69_00170 PF01553 Acyltransferase HOO69_00210 PF00672 HAMP domain HOO69_00210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_00210 PF17200 Single Cache domain 2 HOO69_00235 PF01464 Transglycosylase SLT domain HOO69_00235 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HOO69_00240 PF04362 Bacterial Fe(2+) trafficking HOO69_00245 PF14815 NUDIX domain HOO69_00245 PF00730 HhH-GPD superfamily base excision DNA repair protein HOO69_00245 PF00633 Helix-hairpin-helix motif HOO69_00245 PF10576 Iron-sulfur binding domain of endonuclease III HOO69_00250 PF02390 Putative methyltransferase HOO69_00255 PF04960 Glutaminase HOO69_00260 PF06969 HemN C-terminal domain HOO69_00260 PF04055 Radical SAM superfamily HOO69_00265 PF01725 Ham1 family HOO69_00275 PF02594 Uncharacterised ACR, YggU family COG1872 HOO69_00280 PF02325 YGGT family HOO69_00285 PF14748 Pyrroline-5-carboxylate reductase dimerisation HOO69_00285 PF03807 NADP oxidoreductase coenzyme F420-dependent HOO69_00290 PF01168 Alanine racemase, N-terminal domain HOO69_00295 PF00437 Type II/IV secretion system protein HOO69_00300 PF00437 Type II/IV secretion system protein HOO69_00310 PF04023 FeoA domain HOO69_00310 PF07664 Ferrous iron transport protein B C terminus HOO69_00310 PF17910 FeoB cytosolic helical domain HOO69_00310 PF02421 Ferrous iron transport protein B HOO69_00310 PF07670 Nucleoside recognition HOO69_00335 PF00005 ABC transporter HOO69_00345 PF03652 Holliday junction resolvase HOO69_00350 PF02622 Uncharacterized ACR, COG1678 HOO69_00355 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HOO69_00355 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HOO69_00360 PF04452 RNA methyltransferase HOO69_00365 PF04231 Endonuclease I HOO69_00370 PF17283 SprT-like zinc ribbon domain HOO69_00370 PF10263 SprT-like family HOO69_00380 PF02772 S-adenosylmethionine synthetase, central domain HOO69_00380 PF00438 S-adenosylmethionine synthetase, N-terminal domain HOO69_00380 PF02773 S-adenosylmethionine synthetase, C-terminal domain HOO69_00385 PF00456 Transketolase, thiamine diphosphate binding domain HOO69_00385 PF02780 Transketolase, C-terminal domain HOO69_00385 PF02779 Transketolase, pyrimidine binding domain HOO69_00395 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HOO69_00395 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HOO69_00400 PF00162 Phosphoglycerate kinase HOO69_00405 PF01116 Fructose-bisphosphate aldolase class-II HOO69_00410 PF00924 Mechanosensitive ion channel HOO69_00410 PF05552 Conserved TM helix HOO69_00420 PF01810 LysE type translocator HOO69_00425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_00425 PF03466 LysR substrate binding domain HOO69_00430 PF04402 Protein of unknown function (DUF541) HOO69_00435 PF07694 5TMR of 5TMR-LYT HOO69_00435 PF00990 Diguanylate cyclase, GGDEF domain HOO69_00450 PF00455 DeoR C terminal sensor domain HOO69_00450 PF08220 DeoR-like helix-turn-helix domain HOO69_00455 PF01380 SIS domain HOO69_00460 PF13419 Haloacid dehalogenase-like hydrolase HOO69_00465 PF05068 Mannitol repressor HOO69_00470 PF08125 Mannitol dehydrogenase C-terminal domain HOO69_00470 PF01232 Mannitol dehydrogenase Rossmann domain HOO69_00475 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HOO69_00475 PF02378 Phosphotransferase system, EIIC HOO69_00475 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HOO69_00480 PF03480 Bacterial extracellular solute-binding protein, family 7 HOO69_00490 PF00348 Polyprenyl synthetase HOO69_00495 PF00829 Ribosomal prokaryotic L21 protein HOO69_00500 PF01016 Ribosomal L27 protein HOO69_00505 PF01926 50S ribosome-binding GTPase HOO69_00505 PF01018 GTP1/OBG HOO69_00510 PF06738 Putative threonine/serine exporter HOO69_00510 PF12821 Threonine/Serine exporter, ThrE HOO69_00515 PF12821 Threonine/Serine exporter, ThrE HOO69_00520 PF00186 Dihydrofolate reductase HOO69_00525 PF00149 Calcineurin-like phosphoesterase HOO69_00530 PF04379 ApaG domain HOO69_00535 PF00398 Ribosomal RNA adenine dimethylase HOO69_00540 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HOO69_00545 PF00639 PPIC-type PPIASE domain HOO69_00545 PF09312 SurA N-terminal domain HOO69_00550 PF03968 OstA-like protein HOO69_00550 PF04453 LPS transport system D HOO69_00555 PF05099 Tellurite resistance protein TerB HOO69_00555 PF00226 DnaJ domain HOO69_00560 PF00589 Phage integrase family HOO69_00590 PF05840 Bacteriophage replication gene A protein (GPA) HOO69_00640 PF04539 Sigma-70 region 3 HOO69_00640 PF04542 Sigma-70 region 2 HOO69_00640 PF00140 Sigma-70 factor, region 1.2 HOO69_00640 PF03979 Sigma-70 factor, region 1.1 HOO69_00640 PF04546 Sigma-70, non-essential region HOO69_00640 PF04545 Sigma-70, region 4 HOO69_00645 PF08275 DNA primase catalytic core, N-terminal domain HOO69_00645 PF01807 CHC2 zinc finger HOO69_00645 PF10410 DnaB-helicase binding domain of primase HOO69_00645 PF08278 DNA primase DnaG DnaB-binding HOO69_00650 PF09424 Yqey-like protein HOO69_00655 PF01165 Ribosomal protein S21 HOO69_00660 PF00814 Glycoprotease family HOO69_00665 PF00561 alpha/beta hydrolase fold HOO69_00675 PF02152 Dihydroneopterin aldolase HOO69_00680 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HOO69_00690 PF04977 Septum formation initiator HOO69_00695 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HOO69_00700 PF02542 YgbB family HOO69_00705 PF01142 tRNA pseudouridine synthase D (TruD) HOO69_00710 PF01975 Survival protein SurE HOO69_00720 PF01551 Peptidase family M23 HOO69_00720 PF01476 LysM domain HOO69_00725 PF04542 Sigma-70 region 2 HOO69_00725 PF00140 Sigma-70 factor, region 1.2 HOO69_00725 PF04539 Sigma-70 region 3 HOO69_00725 PF04545 Sigma-70, region 4 HOO69_00730 PF03471 Transporter associated domain HOO69_00730 PF00571 CBS domain HOO69_00730 PF01595 Cyclin M transmembrane N-terminal domain HOO69_00735 PF01578 Cytochrome C assembly protein HOO69_00740 PF02978 Signal peptide binding domain HOO69_00740 PF02881 SRP54-type protein, helical bundle domain HOO69_00740 PF00448 SRP54-type protein, GTPase domain HOO69_00745 PF00886 Ribosomal protein S16 HOO69_00750 PF05239 PRC-barrel domain HOO69_00750 PF01782 RimM N-terminal domain HOO69_00760 PF01245 Ribosomal protein L19 HOO69_00765 PF03884 DNA gyrase inhibitor YacG HOO69_00770 PF07072 Cell division protein HOO69_00775 PF01121 Dephospho-CoA kinase HOO69_00780 PF01478 Type IV leader peptidase family HOO69_00780 PF06750 Bacterial Peptidase A24 N-terminal domain HOO69_00785 PF00482 Type II secretion system (T2SS), protein F HOO69_00790 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HOO69_00790 PF00437 Type II/IV secretion system protein HOO69_00795 PF00114 Pilin (bacterial filament) HOO69_00795 PF07963 Prokaryotic N-terminal methylation motif HOO69_00800 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HOO69_00800 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HOO69_00805 PF01510 N-acetylmuramoyl-L-alanine amidase HOO69_00810 PF00258 Flavodoxin HOO69_00815 PF02899 Phage integrase, N-terminal SAM-like domain HOO69_00815 PF00589 Phage integrase family HOO69_00820 PF10411 Disulfide bond isomerase protein N-terminus HOO69_00820 PF13098 Thioredoxin-like domain HOO69_00825 PF01368 DHH family HOO69_00825 PF17768 RecJ OB domain HOO69_00825 PF02272 DHHA1 domain HOO69_00830 PF00392 Bacterial regulatory proteins, gntR family HOO69_00830 PF07729 FCD domain HOO69_00835 PF00456 Transketolase, thiamine diphosphate binding domain HOO69_00835 PF17831 Pyruvate dehydrogenase E1 component middle domain HOO69_00840 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HOO69_00840 PF00364 Biotin-requiring enzyme HOO69_00840 PF02817 e3 binding domain HOO69_00845 PF07992 Pyridine nucleotide-disulphide oxidoreductase HOO69_00845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HOO69_00850 PF00440 Bacterial regulatory proteins, tetR family HOO69_00855 PF00156 Phosphoribosyl transferase domain HOO69_00860 PF00484 Carbonic anhydrase HOO69_00865 PF01740 STAS domain HOO69_00865 PF00916 Sulfate permease family HOO69_00870 PF00005 ABC transporter HOO69_00875 PF01061 ABC-2 type transporter HOO69_00880 PF02569 Pantoate-beta-alanine ligase HOO69_00885 PF02548 Ketopantoate hydroxymethyltransferase HOO69_00890 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HOO69_00895 PF12627 Probable RNA and SrmB- binding site of polymerase A HOO69_00895 PF12626 Polymerase A arginine-rich C-terminus HOO69_00895 PF01743 Poly A polymerase head domain HOO69_00900 PF00749 tRNA synthetases class I (E and Q), catalytic domain HOO69_00905 PF01258 Prokaryotic dksA/traR C4-type zinc finger HOO69_00910 PF03749 Sugar fermentation stimulation protein RE domain HOO69_00910 PF17746 SfsA N-terminal OB domain HOO69_00915 PF00271 Helicase conserved C-terminal domain HOO69_00915 PF04408 Helicase associated domain (HA2) HOO69_00915 PF00270 DEAD/DEAH box helicase HOO69_00915 PF08482 ATP-dependent helicase C-terminal HOO69_00920 PF00912 Transglycosylase HOO69_00920 PF14814 Bifunctional transglycosylase second domain HOO69_00920 PF00905 Penicillin binding protein transpeptidase domain HOO69_00925 PF01734 Patatin-like phospholipase HOO69_00930 PF00330 Aconitase family (aconitate hydratase) HOO69_00930 PF06434 Aconitate hydratase 2 N-terminus HOO69_00930 PF11791 Aconitate B N-terminal domain HOO69_00935 PF06062 Uncharacterised protein family (UPF0231) HOO69_00940 PF00543 Nitrogen regulatory protein P-II HOO69_00945 PF00909 Ammonium Transporter Family HOO69_00950 PF13416 Bacterial extracellular solute-binding protein HOO69_00960 PF08402 TOBE domain HOO69_00960 PF00005 ABC transporter HOO69_00965 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HOO69_00965 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HOO69_00965 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HOO69_00965 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HOO69_00970 PF06165 Glycosyltransferase family 36 HOO69_00970 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain HOO69_00975 PF00728 Glycosyl hydrolase family 20, catalytic domain HOO69_00975 PF02838 Glycosyl hydrolase family 20, domain 2 HOO69_00980 PF01869 BadF/BadG/BcrA/BcrD ATPase family HOO69_00990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HOO69_00990 PF00005 ABC transporter HOO69_00995 PF00005 ABC transporter HOO69_00995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HOO69_01000 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_01000 PF12911 N-terminal TM domain of oligopeptide transport permease C HOO69_01005 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_01010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HOO69_01015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_01015 PF00072 Response regulator receiver domain HOO69_01015 PF00512 His Kinase A (phospho-acceptor) domain HOO69_01015 PF00497 Bacterial extracellular solute-binding proteins, family 3 HOO69_01020 PF05175 Methyltransferase small domain HOO69_01020 PF08468 Methyltransferase small domain N-terminal HOO69_01025 PF01594 AI-2E family transporter HOO69_01030 PF00202 Aminotransferase class-III HOO69_01035 PF01521 Iron-sulphur cluster biosynthesis HOO69_01045 PF00873 AcrB/AcrD/AcrF family HOO69_01050 PF01476 LysM domain HOO69_01050 PF01551 Peptidase family M23 HOO69_01050 PF08525 Opacity-associated protein A N-terminal motif HOO69_01055 PF00579 tRNA synthetases class I (W and Y) HOO69_01065 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HOO69_01070 PF13609 Gram-negative porin HOO69_01075 PF03449 Transcription elongation factor, N-terminal HOO69_01075 PF01272 Transcription elongation factor, GreA/GreB, C-term HOO69_01080 PF01985 CRS1 / YhbY (CRM) domain HOO69_01085 PF01728 FtsJ-like methyltransferase HOO69_01090 PF01434 Peptidase family M41 HOO69_01090 PF17862 AAA+ lid domain HOO69_01090 PF00004 ATPase family associated with various cellular activities (AAA) HOO69_01090 PF06480 FtsH Extracellular HOO69_01095 PF00809 Pterin binding enzyme HOO69_01100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HOO69_01100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HOO69_01100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HOO69_01100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HOO69_01110 PF00583 Acetyltransferase (GNAT) family HOO69_01115 PF00990 Diguanylate cyclase, GGDEF domain HOO69_01115 PF00563 EAL domain HOO69_01115 PF03707 Bacterial signalling protein N terminal repeat HOO69_01120 PF03144 Elongation factor Tu domain 2 HOO69_01120 PF16658 Class II release factor RF3, C-terminal domain HOO69_01120 PF00009 Elongation factor Tu GTP binding domain HOO69_01125 PF00271 Helicase conserved C-terminal domain HOO69_01125 PF00270 DEAD/DEAH box helicase HOO69_01130 PF05175 Methyltransferase small domain HOO69_01135 PF05525 Branched-chain amino acid transport protein HOO69_01145 PF01336 OB-fold nucleic acid binding domain HOO69_01145 PF00152 tRNA synthetases class II (D, K and N) HOO69_01150 PF02954 Bacterial regulatory protein, Fis family HOO69_01150 PF00158 Sigma-54 interaction domain HOO69_01150 PF00072 Response regulator receiver domain HOO69_01160 PF00248 Aldo/keto reductase family HOO69_01170 PF02976 DNA mismatch repair enzyme MutH HOO69_01180 PF00391 PEP-utilising enzyme, mobile domain HOO69_01180 PF01590 GAF domain HOO69_01180 PF02896 PEP-utilising enzyme, TIM barrel domain HOO69_01180 PF05524 PEP-utilising enzyme, N-terminal HOO69_01185 PF01925 Sulfite exporter TauE/SafE HOO69_01195 PF00303 Thymidylate synthase HOO69_01200 PF02690 Na+/Pi-cotransporter HOO69_01205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_01205 PF03466 LysR substrate binding domain HOO69_01210 PF01022 Bacterial regulatory protein, arsR family HOO69_01215 PF01649 Ribosomal protein S20 HOO69_01220 PF03023 Lipid II flippase MurJ HOO69_01225 PF06574 FAD synthetase HOO69_01225 PF01687 Riboflavin kinase HOO69_01230 PF08264 Anticodon-binding domain of tRNA HOO69_01230 PF06827 Zinc finger found in FPG and IleRS HOO69_01230 PF00133 tRNA synthetases class I (I, L, M and V) HOO69_01240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HOO69_01245 PF02401 LytB protein HOO69_01250 PF00675 Insulinase (Peptidase family M16) HOO69_01250 PF05193 Peptidase M16 inactive domain HOO69_01255 PF02554 Carbon starvation protein CstA HOO69_01265 PF13580 SIS domain HOO69_01275 PF00933 Glycosyl hydrolase family 3 N terminal domain HOO69_01280 PF00072 Response regulator receiver domain HOO69_01280 PF04397 LytTr DNA-binding domain HOO69_01285 PF06580 Histidine kinase HOO69_01285 PF07694 5TMR of 5TMR-LYT HOO69_01290 PF00793 DAHP synthetase I family HOO69_01295 PF02153 Prephenate dehydrogenase HOO69_01295 PF01817 Chorismate mutase type II HOO69_01300 PF01551 Peptidase family M23 HOO69_01300 PF04225 Opacity-associated protein A LysM-like domain HOO69_01305 PF07238 PilZ domain HOO69_01310 PF00005 ABC transporter HOO69_01310 PF12848 ABC transporter HOO69_01315 PF01464 Transglycosylase SLT domain HOO69_01315 PF14718 Soluble lytic murein transglycosylase L domain HOO69_01320 PF01371 Trp repressor protein HOO69_01325 PF01931 Protein of unknown function DUF84 HOO69_01335 PF13416 Bacterial extracellular solute-binding protein HOO69_01340 PF01817 Chorismate mutase type II HOO69_01340 PF00800 Prephenate dehydratase HOO69_01345 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HOO69_01350 PF01464 Transglycosylase SLT domain HOO69_01350 PF00497 Bacterial extracellular solute-binding proteins, family 3 HOO69_01355 PF13525 Outer membrane lipoprotein HOO69_01360 PF01479 S4 domain HOO69_01360 PF00849 RNA pseudouridylate synthase HOO69_01370 PF07724 AAA domain (Cdc48 subfamily) HOO69_01370 PF17871 AAA lid domain HOO69_01370 PF02861 Clp amino terminal domain, pathogenicity island component HOO69_01370 PF10431 C-terminal, D2-small domain, of ClpB protein HOO69_01370 PF00004 ATPase family associated with various cellular activities (AAA) HOO69_01410 PF13091 PLD-like domain HOO69_01415 PF00459 Inositol monophosphatase family HOO69_01420 PF00588 SpoU rRNA Methylase family HOO69_01425 PF02082 Transcriptional regulator HOO69_01430 PF00266 Aminotransferase class-V HOO69_01435 PF01592 NifU-like N terminal domain HOO69_01440 PF01521 Iron-sulphur cluster biosynthesis HOO69_01445 PF07743 HSCB C-terminal oligomerisation domain HOO69_01445 PF00226 DnaJ domain HOO69_01450 PF00012 Hsp70 protein HOO69_01455 PF00111 2Fe-2S iron-sulfur cluster binding domain HOO69_01460 PF04384 Iron-sulphur cluster assembly HOO69_01465 PF12404 Peptidase HOO69_01465 PF00883 Cytosol aminopeptidase family, catalytic domain HOO69_01470 PF00334 Nucleoside diphosphate kinase HOO69_01475 PF00009 Elongation factor Tu GTP binding domain HOO69_01475 PF03144 Elongation factor Tu domain 2 HOO69_01475 PF14492 Elongation Factor G, domain II HOO69_01475 PF03764 Elongation factor G, domain IV HOO69_01475 PF00679 Elongation factor G C-terminus HOO69_01480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_01480 PF03466 LysR substrate binding domain HOO69_01490 PF03466 LysR substrate binding domain HOO69_01490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_01495 PF00501 AMP-binding enzyme HOO69_01500 PF02805 Metal binding domain of Ada HOO69_01500 PF12833 Helix-turn-helix domain HOO69_01530 PF00263 Bacterial type II and III secretion system protein HOO69_01530 PF04972 BON domain HOO69_01530 PF13629 Pilus formation protein N terminal region HOO69_01545 PF00437 Type II/IV secretion system protein HOO69_01570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_01570 PF03466 LysR substrate binding domain HOO69_01575 PF17912 MalK OB fold domain HOO69_01575 PF00005 ABC transporter HOO69_01580 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_01585 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_01590 PF01547 Bacterial extracellular solute-binding protein HOO69_01595 PF02837 Glycosyl hydrolases family 2, sugar binding domain HOO69_01595 PF16353 Domain of unknown function(DUF4981) HOO69_01595 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HOO69_01595 PF02929 Beta galactosidase small chain HOO69_01595 PF00703 Glycosyl hydrolases family 2 HOO69_01600 PF16875 Glycosyl hydrolase family 36 N-terminal domain HOO69_01600 PF16874 Glycosyl hydrolase family 36 C-terminal domain HOO69_01605 PF01204 Trehalase HOO69_01610 PF07883 Cupin domain HOO69_01610 PF12833 Helix-turn-helix domain HOO69_01625 PF12706 Beta-lactamase superfamily domain HOO69_01635 PF13520 Amino acid permease HOO69_01640 PF04074 YhcH/YjgK/YiaL HOO69_01645 PF02929 Beta galactosidase small chain HOO69_01645 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HOO69_01645 PF16353 Domain of unknown function(DUF4981) HOO69_01645 PF02837 Glycosyl hydrolases family 2, sugar binding domain HOO69_01645 PF00703 Glycosyl hydrolases family 2 HOO69_01650 PF00356 Bacterial regulatory proteins, lacI family HOO69_01655 PF16363 GDP-mannose 4,6 dehydratase HOO69_01660 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HOO69_01660 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HOO69_01665 PF00288 GHMP kinases N terminal domain HOO69_01665 PF08544 GHMP kinases C terminal HOO69_01665 PF10509 Galactokinase galactose-binding signature HOO69_01670 PF01263 Aldose 1-epimerase HOO69_01680 PF00578 AhpC/TSA family HOO69_01680 PF10417 C-terminal domain of 1-Cys peroxiredoxin HOO69_01685 PF13192 Thioredoxin domain HOO69_01685 PF07992 Pyridine nucleotide-disulphide oxidoreductase HOO69_01690 PF03466 LysR substrate binding domain HOO69_01690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_01695 PF00248 Aldo/keto reductase family HOO69_01700 PF00356 Bacterial regulatory proteins, lacI family HOO69_01705 PF01588 Putative tRNA binding domain HOO69_01720 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HOO69_01720 PF01266 FAD dependent oxidoreductase HOO69_01725 PF00455 DeoR C terminal sensor domain HOO69_01725 PF08220 DeoR-like helix-turn-helix domain HOO69_01730 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HOO69_01730 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HOO69_01735 PF07690 Major Facilitator Superfamily HOO69_01740 PF14602 Hexapeptide repeat of succinyl-transferase HOO69_01740 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle HOO69_01745 PF10417 C-terminal domain of 1-Cys peroxiredoxin HOO69_01745 PF00578 AhpC/TSA family HOO69_01750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_01750 PF03466 LysR substrate binding domain HOO69_01755 PF01274 Malate synthase HOO69_01760 PF00463 Isocitrate lyase family HOO69_01765 PF00571 CBS domain HOO69_01770 PF02547 Queuosine biosynthesis protein HOO69_01775 PF01702 Queuine tRNA-ribosyltransferase HOO69_01780 PF02699 Preprotein translocase subunit HOO69_01785 PF13721 SecD export protein N-terminal TM region HOO69_01785 PF02355 Protein export membrane protein HOO69_01785 PF07549 SecD/SecF GG Motif HOO69_01790 PF07549 SecD/SecF GG Motif HOO69_01790 PF02355 Protein export membrane protein HOO69_01800 PF13407 Periplasmic binding protein domain HOO69_01810 PF03411 Penicillin-insensitive murein endopeptidase HOO69_01815 PF12838 4Fe-4S dicluster domain HOO69_01825 PF04381 Putative exonuclease, RdgC HOO69_01830 PF00072 Response regulator receiver domain HOO69_01830 PF00486 Transcriptional regulatory protein, C terminal HOO69_01835 PF00989 PAS fold HOO69_01835 PF11808 Phosphate regulon sensor protein PhoR HOO69_01835 PF00512 His Kinase A (phospho-acceptor) domain HOO69_01835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_01840 PF12849 PBP superfamily domain HOO69_01845 PF02541 Ppx/GppA phosphatase family HOO69_01850 PF13090 Polyphosphate kinase C-terminal domain 2 HOO69_01850 PF17941 Polyphosphate kinase C-terminal domain 1 HOO69_01850 PF02503 Polyphosphate kinase middle domain HOO69_01850 PF13089 Polyphosphate kinase N-terminal domain HOO69_01855 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_01860 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_01865 PF00005 ABC transporter HOO69_01870 PF01895 PhoU domain HOO69_01890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_01890 PF03466 LysR substrate binding domain HOO69_01895 PF03932 CutC family HOO69_01900 PF07130 YebG protein HOO69_01905 PF00440 Bacterial regulatory proteins, tetR family HOO69_01910 PF00529 HlyD membrane-fusion protein of T1SS HOO69_01910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HOO69_01915 PF00873 AcrB/AcrD/AcrF family HOO69_01920 PF03466 LysR substrate binding domain HOO69_01920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_01930 PF01590 GAF domain HOO69_01930 PF00158 Sigma-54 interaction domain HOO69_01930 PF02954 Bacterial regulatory protein, Fis family HOO69_01935 PF17912 MalK OB fold domain HOO69_01935 PF00005 ABC transporter HOO69_01940 PF17912 MalK OB fold domain HOO69_01940 PF00005 ABC transporter HOO69_01945 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_01950 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_01965 PF17946 RecC C-terminal domain HOO69_01970 PF12705 PD-(D/E)XK nuclease superfamily HOO69_01970 PF00580 UvrD/REP helicase N-terminal domain HOO69_01970 PF13361 UvrD-like helicase C-terminal domain HOO69_01975 PF13538 UvrD-like helicase C-terminal domain HOO69_01995 PF06725 3D domain HOO69_01995 PF03562 MltA specific insert domain HOO69_02000 PF00899 ThiF family HOO69_02005 PF02657 Fe-S metabolism associated domain HOO69_02010 PF04055 Radical SAM superfamily HOO69_02015 PF13464 Domain of unknown function (DUF4115) HOO69_02020 PF04551 GcpE protein HOO69_02025 PF03129 Anticodon binding domain HOO69_02025 PF13393 Histidyl-tRNA synthetase HOO69_02030 PF09976 Tetratricopeptide repeat-like domain HOO69_02035 PF13360 PQQ-like domain HOO69_02040 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HOO69_02040 PF01926 50S ribosome-binding GTPase HOO69_02050 PF00990 Diguanylate cyclase, GGDEF domain HOO69_02050 PF17151 Periplasmic sensor domain HOO69_02060 PF02601 Exonuclease VII, large subunit HOO69_02060 PF13742 OB-fold nucleic acid binding domain HOO69_02065 PF00478 IMP dehydrogenase / GMP reductase domain HOO69_02065 PF00571 CBS domain HOO69_02070 PF02540 NAD synthase HOO69_02070 PF00958 GMP synthase C terminal domain HOO69_02070 PF00117 Glutamine amidotransferase class-I HOO69_02075 PF00704 Glycosyl hydrolases family 18 HOO69_02075 PF06483 Chitinase C HOO69_02080 PF01184 GPR1/FUN34/yaaH family HOO69_02085 PF01235 Sodium:alanine symporter family HOO69_02090 PF01266 FAD dependent oxidoreductase HOO69_02095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_02095 PF03466 LysR substrate binding domain HOO69_02100 PF07885 Ion channel HOO69_02115 PF01053 Cys/Met metabolism PLP-dependent enzyme HOO69_02120 PF01595 Cyclin M transmembrane N-terminal domain HOO69_02120 PF03471 Transporter associated domain HOO69_02120 PF00571 CBS domain HOO69_02125 PF03466 LysR substrate binding domain HOO69_02125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_02135 PF00753 Metallo-beta-lactamase superfamily HOO69_02135 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HOO69_02135 PF10996 Beta-Casp domain HOO69_02140 PF01553 Acyltransferase HOO69_02160 PF00924 Mechanosensitive ion channel HOO69_02165 PF00082 Subtilase family HOO69_02165 PF05922 Peptidase inhibitor I9 HOO69_02180 PF01300 Telomere recombination HOO69_02180 PF03481 Putative GTP-binding controlling metal-binding HOO69_02185 PF01266 FAD dependent oxidoreductase HOO69_02190 PF07687 Peptidase dimerisation domain HOO69_02190 PF01546 Peptidase family M20/M25/M40 HOO69_02195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HOO69_02200 PF02028 BCCT, betaine/carnitine/choline family transporter HOO69_02220 PF01238 Phosphomannose isomerase type I HOO69_02225 PF07690 Major Facilitator Superfamily HOO69_02230 PF07730 Histidine kinase HOO69_02230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_02230 PF05231 MASE1 HOO69_02235 PF00196 Bacterial regulatory proteins, luxR family HOO69_02235 PF00072 Response regulator receiver domain HOO69_02240 PF07690 Major Facilitator Superfamily HOO69_02255 PF01668 SmpB protein HOO69_02260 PF03364 Polyketide cyclase / dehydrase and lipid transport HOO69_02265 PF03658 RnfH family Ubiquitin HOO69_02270 PF04355 SmpA / OmlA family HOO69_02275 PF02463 RecF/RecN/SMC N terminal domain HOO69_02285 PF01025 GrpE HOO69_02290 PF00375 Sodium:dicarboxylate symporter family HOO69_02305 PF00012 Hsp70 protein HOO69_02310 PF00226 DnaJ domain HOO69_02310 PF00684 DnaJ central domain HOO69_02310 PF01556 DnaJ C terminal domain HOO69_02340 PF03806 AbgT putative transporter family HOO69_02350 PF14437 MafB19-like deaminase HOO69_02355 PF00497 Bacterial extracellular solute-binding proteins, family 3 HOO69_02355 PF01464 Transglycosylase SLT domain HOO69_02360 PF02769 AIR synthase related protein, C-terminal domain HOO69_02360 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HOO69_02360 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HOO69_02375 PF06786 Uncharacterised protein family (UPF0253) HOO69_02385 PF00551 Formyl transferase HOO69_02390 PF00586 AIR synthase related protein, N-terminal domain HOO69_02390 PF02769 AIR synthase related protein, C-terminal domain HOO69_02400 PF01479 S4 domain HOO69_02400 PF00849 RNA pseudouridylate synthase HOO69_02405 PF01713 Smr domain HOO69_02430 PF03173 Putative carbohydrate binding domain HOO69_02430 PF02838 Glycosyl hydrolase family 20, domain 2 HOO69_02430 PF00728 Glycosyl hydrolase family 20, catalytic domain HOO69_02430 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain HOO69_02435 PF00854 POT family HOO69_02440 PF13537 Glutamine amidotransferase domain HOO69_02440 PF00733 Asparagine synthase HOO69_02445 PF02254 TrkA-N domain HOO69_02445 PF00999 Sodium/hydrogen exchanger family HOO69_02450 PF01047 MarR family HOO69_02450 PF00480 ROK family HOO69_02455 PF01979 Amidohydrolase family HOO69_02460 PF02378 Phosphotransferase system, EIIC HOO69_02460 PF00367 phosphotransferase system, EIIB HOO69_02460 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HOO69_02470 PF00749 tRNA synthetases class I (E and Q), catalytic domain HOO69_02470 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HOO69_02475 PF01475 Ferric uptake regulator family HOO69_02485 PF00258 Flavodoxin HOO69_02495 PF12697 Alpha/beta hydrolase family HOO69_02500 PF17206 SeqA protein N-terminal domain HOO69_02500 PF03925 SeqA protein C-terminal domain HOO69_02505 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HOO69_02505 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HOO69_02505 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HOO69_02505 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HOO69_02515 PF01784 NIF3 (NGG1p interacting factor 3) HOO69_02520 PF00285 Citrate synthase, C-terminal domain HOO69_02525 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HOO69_02530 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HOO69_02535 PF02910 Fumarate reductase flavoprotein C-term HOO69_02535 PF00890 FAD binding domain HOO69_02540 PF13085 2Fe-2S iron-sulfur cluster binding domain HOO69_02545 PF16078 2-oxoglutarate dehydrogenase N-terminus HOO69_02545 PF02779 Transketolase, pyrimidine binding domain HOO69_02545 PF16870 2-oxoglutarate dehydrogenase C-terminal HOO69_02545 PF00676 Dehydrogenase E1 component HOO69_02550 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HOO69_02550 PF00364 Biotin-requiring enzyme HOO69_02550 PF02817 e3 binding domain HOO69_02560 PF00549 CoA-ligase HOO69_02560 PF02629 CoA binding domain HOO69_02585 PF04287 tRNA pseudouridine synthase C HOO69_02590 PF00849 RNA pseudouridylate synthase HOO69_02595 PF06291 Bor protein HOO69_02600 PF02780 Transketolase, C-terminal domain HOO69_02600 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HOO69_02600 PF02779 Transketolase, pyrimidine binding domain HOO69_02605 PF00348 Polyprenyl synthetase HOO69_02610 PF02609 Exonuclease VII small subunit HOO69_02615 PF01618 MotA/TolQ/ExbB proton channel family HOO69_02620 PF13677 Membrane MotB of proton-channel complex MotA/MotB HOO69_02620 PF00691 OmpA family HOO69_02625 PF02568 Thiamine biosynthesis protein (ThiI) HOO69_02625 PF02926 THUMP domain HOO69_02630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_02630 PF03466 LysR substrate binding domain HOO69_02640 PF04241 Protein of unknown function (DUF423) HOO69_02645 PF18125 RlmM ferredoxin-like domain HOO69_02645 PF01728 FtsJ-like methyltransferase HOO69_02650 PF01223 DNA/RNA non-specific endonuclease HOO69_02655 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HOO69_02655 PF01367 5'-3' exonuclease, C-terminal SAM fold HOO69_02660 PF11892 Domain of unknown function (DUF3412) HOO69_02660 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases HOO69_02660 PF03641 Possible lysine decarboxylase HOO69_02665 PF00072 Response regulator receiver domain HOO69_02665 PF00990 Diguanylate cyclase, GGDEF domain HOO69_02675 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HOO69_02675 PF14489 QueF-like protein HOO69_02680 PF07348 Syd protein (SUKH-2) HOO69_02695 PF02557 D-alanyl-D-alanine carboxypeptidase HOO69_02700 PF01546 Peptidase family M20/M25/M40 HOO69_02700 PF07687 Peptidase dimerisation domain HOO69_02705 PF03960 ArsC family HOO69_02715 PF13698 Domain of unknown function (DUF4156) HOO69_02730 PF00106 short chain dehydrogenase HOO69_02735 PF02335 Cytochrome c552 HOO69_02745 PF13247 4Fe-4S dicluster domain HOO69_02750 PF03916 Polysulphide reductase, NrfD HOO69_02755 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HOO69_02755 PF01578 Cytochrome C assembly protein HOO69_02760 PF08534 Redoxin HOO69_02765 PF03918 Cytochrome C biogenesis protein HOO69_02775 PF11143 Protein of unknown function (DUF2919) HOO69_02780 PF04261 Dyp-type peroxidase family HOO69_02785 PF00669 Bacterial flagellin N-terminal helical region HOO69_02785 PF00700 Bacterial flagellin C-terminal helical region HOO69_02785 PF07196 Flagellin hook IN motif HOO69_02790 PF07196 Flagellin hook IN motif HOO69_02790 PF00669 Bacterial flagellin N-terminal helical region HOO69_02790 PF00700 Bacterial flagellin C-terminal helical region HOO69_02795 PF00669 Bacterial flagellin N-terminal helical region HOO69_02795 PF07196 Flagellin hook IN motif HOO69_02795 PF00700 Bacterial flagellin C-terminal helical region HOO69_02800 PF03646 FlaG protein HOO69_02805 PF07195 Flagellar hook-associated protein 2 C-terminus HOO69_02805 PF07196 Flagellin hook IN motif HOO69_02805 PF02465 Flagellar hook-associated protein 2 N-terminus HOO69_02815 PF02561 Flagellar protein FliS HOO69_02820 PF00158 Sigma-54 interaction domain HOO69_02820 PF06490 Flagellar regulatory protein FleQ HOO69_02820 PF02954 Bacterial regulatory protein, Fis family HOO69_02825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_02825 PF00512 His Kinase A (phospho-acceptor) domain HOO69_02830 PF02954 Bacterial regulatory protein, Fis family HOO69_02830 PF00072 Response regulator receiver domain HOO69_02830 PF00158 Sigma-54 interaction domain HOO69_02835 PF02049 Flagellar hook-basal body complex protein FliE HOO69_02840 PF01514 Secretory protein of YscJ/FliF family HOO69_02840 PF08345 Flagellar M-ring protein C-terminal HOO69_02845 PF01706 FliG C-terminal domain HOO69_02845 PF14841 FliG middle domain HOO69_02845 PF14842 FliG N-terminal domain HOO69_02855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HOO69_02855 PF18269 T3SS EscN ATPase C-terminal domain HOO69_02870 PF03748 Flagellar basal body-associated protein FliL HOO69_02875 PF02154 Flagellar motor switch protein FliM HOO69_02875 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HOO69_02880 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HOO69_02885 PF04347 Flagellar biosynthesis protein, FliO HOO69_02890 PF00813 FliP family HOO69_02895 PF01313 Bacterial export proteins, family 3 HOO69_02900 PF01311 Bacterial export proteins, family 1 HOO69_02905 PF01312 FlhB HrpN YscU SpaS Family HOO69_02910 PF01713 Smr domain HOO69_02915 PF05175 Methyltransferase small domain HOO69_02920 PF01264 Chorismate synthase HOO69_02925 PF00149 Calcineurin-like phosphoesterase HOO69_02925 PF02872 5'-nucleotidase, C-terminal domain HOO69_02935 PF03458 UPF0126 domain HOO69_02940 PF04315 Elongation factor P hydroxylase HOO69_02955 PF08891 YfcL protein HOO69_02960 PF03358 NADPH-dependent FMN reductase HOO69_02965 PF01266 FAD dependent oxidoreductase HOO69_02965 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HOO69_02970 PF00109 Beta-ketoacyl synthase, N-terminal domain HOO69_02970 PF02801 Beta-ketoacyl synthase, C-terminal domain HOO69_02975 PF11890 Domain of unknown function (DUF3410) HOO69_02975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HOO69_02975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HOO69_02980 PF02774 Semialdehyde dehydrogenase, dimerisation domain HOO69_02980 PF01118 Semialdehyde dehydrogenase, NAD binding domain HOO69_02990 PF01416 tRNA pseudouridine synthase HOO69_02995 PF01039 Carboxyl transferase domain HOO69_02995 PF17848 Acetyl-coA carboxylase zinc finger domain HOO69_03000 PF08245 Mur ligase middle domain HOO69_03000 PF02875 Mur ligase family, glutamate ligase domain HOO69_03005 PF05036 Sporulation related domain HOO69_03010 PF02674 Colicin V production protein HOO69_03015 PF00156 Phosphoribosyl transferase domain HOO69_03020 PF00950 ABC 3 transport family HOO69_03025 PF00005 ABC transporter HOO69_03030 PF01297 Zinc-uptake complex component A periplasmic HOO69_03035 PF12833 Helix-turn-helix domain HOO69_03035 PF02311 AraC-like ligand binding domain HOO69_03045 PF04023 FeoA domain HOO69_03050 PF07664 Ferrous iron transport protein B C terminus HOO69_03050 PF07670 Nucleoside recognition HOO69_03050 PF02421 Ferrous iron transport protein B HOO69_03065 PF03485 Arginyl tRNA synthetase N terminal domain HOO69_03065 PF00750 tRNA synthetases class I (R) HOO69_03065 PF05746 DALR anticodon binding domain HOO69_03075 PF06185 YecM protein HOO69_03080 PF05193 Peptidase M16 inactive domain HOO69_03080 PF16187 Middle or third domain of peptidase_M16 HOO69_03080 PF00675 Insulinase (Peptidase family M16) HOO69_03085 PF00300 Histidine phosphatase superfamily (branch 1) HOO69_03090 PF00771 FHIPEP family HOO69_03095 PF00448 SRP54-type protein, GTPase domain HOO69_03100 PF10609 NUBPL iron-transfer P-loop NTPase HOO69_03105 PF04539 Sigma-70 region 3 HOO69_03105 PF04545 Sigma-70, region 4 HOO69_03105 PF04542 Sigma-70 region 2 HOO69_03110 PF00072 Response regulator receiver domain HOO69_03115 PF04344 Chemotaxis phosphatase, CheZ HOO69_03120 PF00072 Response regulator receiver domain HOO69_03120 PF01627 Hpt domain HOO69_03120 PF01584 CheW-like domain HOO69_03120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_03120 PF02895 Signal transducing histidine kinase, homodimeric domain HOO69_03125 PF01339 CheB methylesterase HOO69_03125 PF00072 Response regulator receiver domain HOO69_03130 PF13614 AAA domain HOO69_03140 PF01584 CheW-like domain HOO69_03150 PF00005 ABC transporter HOO69_03160 PF01578 Cytochrome C assembly protein HOO69_03165 PF04995 Heme exporter protein D (CcmD) HOO69_03170 PF03100 CcmE HOO69_03175 PF01578 Cytochrome C assembly protein HOO69_03175 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HOO69_03180 PF08534 Redoxin HOO69_03185 PF03918 Cytochrome C biogenesis protein HOO69_03190 PF03918 Cytochrome C biogenesis protein HOO69_03195 PF04333 MlaA lipoprotein HOO69_03200 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HOO69_03205 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HOO69_03215 PF04542 Sigma-70 region 2 HOO69_03215 PF08281 Sigma-70, region 4 HOO69_03220 PF00108 Thiolase, N-terminal domain HOO69_03220 PF02803 Thiolase, C-terminal domain HOO69_03225 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HOO69_03225 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HOO69_03225 PF00378 Enoyl-CoA hydratase/isomerase HOO69_03230 PF00881 Nitroreductase family HOO69_03235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_03235 PF03466 LysR substrate binding domain HOO69_03240 PF00072 Response regulator receiver domain HOO69_03245 PF04304 Protein of unknown function (DUF454) HOO69_03250 PF00156 Phosphoribosyl transferase domain HOO69_03255 PF12170 DNA polymerase III tau subunit V interacting with alpha HOO69_03255 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HOO69_03255 PF12169 DNA polymerase III subunits gamma and tau domain III HOO69_03260 PF02575 YbaB/EbfC DNA-binding family HOO69_03265 PF02132 RecR protein HOO69_03265 PF13662 Toprim domain HOO69_03270 PF03692 Putative zinc- or iron-chelating domain HOO69_03330 PF17871 AAA lid domain HOO69_03330 PF10431 C-terminal, D2-small domain, of ClpB protein HOO69_03330 PF00004 ATPase family associated with various cellular activities (AAA) HOO69_03330 PF07724 AAA domain (Cdc48 subfamily) HOO69_03335 PF00158 Sigma-54 interaction domain HOO69_03335 PF00072 Response regulator receiver domain HOO69_03335 PF02954 Bacterial regulatory protein, Fis family HOO69_03360 PF03692 Putative zinc- or iron-chelating domain HOO69_03385 PF01757 Acyltransferase family HOO69_03390 PF00924 Mechanosensitive ion channel HOO69_03390 PF05552 Conserved TM helix HOO69_03400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HOO69_03410 PF02028 BCCT, betaine/carnitine/choline family transporter HOO69_03425 PF13847 Methyltransferase domain HOO69_03430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_03430 PF08447 PAS fold HOO69_03430 PF13426 PAS domain HOO69_03435 PF01263 Aldose 1-epimerase HOO69_03440 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HOO69_03440 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HOO69_03445 PF01641 SelR domain HOO69_03455 PF07023 Protein of unknown function (DUF1315) HOO69_03460 PF02810 SEC-C motif HOO69_03465 PF08668 HDOD domain HOO69_03465 PF00563 EAL domain HOO69_03475 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HOO69_03480 PF01406 tRNA synthetases class I (C) catalytic domain HOO69_03480 PF09190 DALR domain HOO69_03485 PF00265 Thymidine kinase HOO69_03490 PF01176 Translation initiation factor 1A / IF-1 HOO69_03495 PF04376 Arginine-tRNA-protein transferase, N terminus HOO69_03495 PF04377 Arginine-tRNA-protein transferase, C terminus HOO69_03500 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HOO69_03515 PF10692 Protein of unknown function (DUF2498) HOO69_03520 PF01396 Topoisomerase DNA binding C4 zinc finger HOO69_03520 PF01751 Toprim domain HOO69_03520 PF01131 DNA topoisomerase HOO69_03520 PF08272 Topoisomerase I zinc-ribbon-like HOO69_03530 PF00483 Nucleotidyl transferase HOO69_03555 PF04994 TfoX C-terminal domain HOO69_03555 PF04993 TfoX N-terminal domain HOO69_03560 PF00356 Bacterial regulatory proteins, lacI family HOO69_03565 PF02613 Nitrate reductase delta subunit HOO69_03570 PF00072 Response regulator receiver domain HOO69_03570 PF00486 Transcriptional regulatory protein, C terminal HOO69_03575 PF02698 DUF218 domain HOO69_03580 PF13847 Methyltransferase domain HOO69_03585 PF17192 MukF middle domain HOO69_03585 PF17193 MukF C-terminal domain HOO69_03585 PF03882 MukF winged-helix domain HOO69_03590 PF04288 MukE-like family HOO69_03595 PF04310 MukB N-terminal HOO69_03595 PF16330 MukB hinge domain HOO69_03600 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HOO69_03600 PF12833 Helix-turn-helix domain HOO69_03605 PF00171 Aldehyde dehydrogenase family HOO69_03610 PF00501 AMP-binding enzyme HOO69_03610 PF13193 AMP-binding enzyme C-terminal domain HOO69_03615 PF00732 GMC oxidoreductase HOO69_03615 PF05199 GMC oxidoreductase HOO69_03630 PF08443 RimK-like ATP-grasp domain HOO69_03630 PF18030 RimK PreATP-grasp domain HOO69_03635 PF08003 Protein of unknown function (DUF1698) HOO69_03640 PF13649 Methyltransferase domain HOO69_03645 PF01904 Protein of unknown function DUF72 HOO69_03650 PF01336 OB-fold nucleic acid binding domain HOO69_03650 PF02938 GAD domain HOO69_03650 PF00152 tRNA synthetases class II (D, K and N) HOO69_03655 PF00849 RNA pseudouridylate synthase HOO69_03660 PF03971 Monomeric isocitrate dehydrogenase HOO69_03665 PF00313 'Cold-shock' DNA-binding domain HOO69_03670 PF02617 ATP-dependent Clp protease adaptor protein ClpS HOO69_03675 PF10431 C-terminal, D2-small domain, of ClpB protein HOO69_03675 PF02861 Clp amino terminal domain, pathogenicity island component HOO69_03675 PF17871 AAA lid domain HOO69_03675 PF07724 AAA domain (Cdc48 subfamily) HOO69_03675 PF00004 ATPase family associated with various cellular activities (AAA) HOO69_03690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_03690 PF03466 LysR substrate binding domain HOO69_03710 PF01226 Formate/nitrite transporter HOO69_03720 PF03649 Uncharacterised protein family (UPF0014) HOO69_03725 PF06796 Periplasmic nitrate reductase protein NapE HOO69_03730 PF03264 NapC/NirT cytochrome c family, N-terminal region HOO69_03735 PF01568 Molydopterin dinucleotide binding domain HOO69_03735 PF00384 Molybdopterin oxidoreductase HOO69_03735 PF18364 Molybdopterin oxidoreductase N-terminal domain HOO69_03765 PF16874 Glycosyl hydrolase family 36 C-terminal domain HOO69_03765 PF16875 Glycosyl hydrolase family 36 N-terminal domain HOO69_03770 PF02075 Crossover junction endodeoxyribonuclease RuvC HOO69_03775 PF00672 HAMP domain HOO69_03775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_03775 PF02203 Tar ligand binding domain homologue HOO69_03780 PF07499 RuvA, C-terminal domain HOO69_03780 PF01330 RuvA N terminal domain HOO69_03785 PF17864 RuvB AAA lid domain HOO69_03785 PF05491 RuvB C-terminal winged helix domain HOO69_03785 PF05496 Holliday junction DNA helicase RuvB P-loop domain HOO69_03790 PF01654 Cytochrome bd terminal oxidase subunit I HOO69_03795 PF02322 Cytochrome bd terminal oxidase subunit II HOO69_03800 PF08173 Membrane bound YbgT-like protein HOO69_03810 PF03061 Thioesterase superfamily HOO69_03815 PF01618 MotA/TolQ/ExbB proton channel family HOO69_03820 PF02472 Biopolymer transport protein ExbD/TolR HOO69_03835 PF00691 OmpA family HOO69_03840 PF13174 Tetratricopeptide repeat HOO69_03840 PF16331 TolA binding protein trimerisation HOO69_03845 PF02445 Quinolinate synthetase A protein HOO69_03850 PF00764 Arginosuccinate synthase HOO69_03860 PF00512 His Kinase A (phospho-acceptor) domain HOO69_03860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_03860 PF09308 LuxQ, periplasmic HOO69_03860 PF00072 Response regulator receiver domain HOO69_03865 PF06610 L-alanine exporter HOO69_03890 PF00145 C-5 cytosine-specific DNA methylase HOO69_03920 PF01238 Phosphomannose isomerase type I HOO69_03925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HOO69_03925 PF02378 Phosphotransferase system, EIIC HOO69_03925 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HOO69_03930 PF12833 Helix-turn-helix domain HOO69_03940 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HOO69_03950 PF00132 Bacterial transferase hexapeptide (six repeats) HOO69_03950 PF03479 Plants and Prokaryotes Conserved (PCC) domain HOO69_03950 PF12804 MobA-like NTP transferase domain HOO69_03965 PF00512 His Kinase A (phospho-acceptor) domain HOO69_03965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_03965 PF00672 HAMP domain HOO69_03970 PF00072 Response regulator receiver domain HOO69_03970 PF00486 Transcriptional regulatory protein, C terminal HOO69_03975 PF00535 Glycosyl transferase family 2 HOO69_03980 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase HOO69_03995 PF09317 Domain of unknown function (DUF1974) HOO69_03995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HOO69_03995 PF02770 Acyl-CoA dehydrogenase, middle domain HOO69_03995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HOO69_04000 PF12241 Trans-2-enoyl-CoA reductase catalytic region HOO69_04000 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HOO69_04000 PF07055 Enoyl reductase FAD binding domain HOO69_04005 PF03372 Endonuclease/Exonuclease/phosphatase family HOO69_04010 PF00672 HAMP domain HOO69_04010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_04015 PF08007 Cupin superfamily protein HOO69_04020 PF10689 Protein of unknown function (DUF2496) HOO69_04025 PF07445 Primosomal replication protein priC HOO69_04030 PF01925 Sulfite exporter TauE/SafE HOO69_04035 PF06733 DEAD_2 HOO69_04035 PF13307 Helicase C-terminal domain HOO69_04040 PF13609 Gram-negative porin HOO69_04045 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HOO69_04050 PF00202 Aminotransferase class-III HOO69_04055 PF04055 Radical SAM superfamily HOO69_04055 PF06968 Biotin and Thiamin Synthesis associated domain HOO69_04090 PF00106 short chain dehydrogenase HOO69_04115 PF16036 Chalcone isomerase-like HOO69_04125 PF00206 Lyase HOO69_04125 PF08328 Adenylosuccinate lyase C-terminal HOO69_04130 PF04356 Protein of unknown function (DUF489) HOO69_04145 PF00294 pfkB family carbohydrate kinase HOO69_04150 PF00816 H-NS histone family HOO69_04155 PF03553 Na+/H+ antiporter family HOO69_04160 PF08029 HisG, C-terminal domain HOO69_04160 PF01634 ATP phosphoribosyltransferase HOO69_04165 PF00815 Histidinol dehydrogenase HOO69_04170 PF00155 Aminotransferase class I and II HOO69_04175 PF08645 Polynucleotide kinase 3 phosphatase HOO69_04175 PF00475 Imidazoleglycerol-phosphate dehydratase HOO69_04180 PF00117 Glutamine amidotransferase class-I HOO69_04185 PF00977 Histidine biosynthesis protein HOO69_04190 PF00977 Histidine biosynthesis protein HOO69_04205 PF02833 DHHA2 domain HOO69_04205 PF01368 DHH family HOO69_04220 PF00005 ABC transporter HOO69_04225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HOO69_04225 PF00005 ABC transporter HOO69_04230 PF12911 N-terminal TM domain of oligopeptide transport permease C HOO69_04230 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_04235 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_04240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HOO69_04245 PF02954 Bacterial regulatory protein, Fis family HOO69_04245 PF00158 Sigma-54 interaction domain HOO69_04250 PF04012 PspA/IM30 family HOO69_04255 PF06667 Phage shock protein B HOO69_04270 PF13533 Biotin-lipoyl like HOO69_04275 PF00873 AcrB/AcrD/AcrF family HOO69_04280 PF13673 Acetyltransferase (GNAT) domain HOO69_04280 PF13302 Acetyltransferase (GNAT) domain HOO69_04280 PF03352 Methyladenine glycosylase HOO69_04280 PF00117 Glutamine amidotransferase class-I HOO69_04280 PF00958 GMP synthase C terminal domain HOO69_04285 PF03280 Proteobacterial lipase chaperone protein HOO69_04290 PF00561 alpha/beta hydrolase fold HOO69_04295 PF01053 Cys/Met metabolism PLP-dependent enzyme HOO69_04300 PF13396 Phospholipase_D-nuclease N-terminal HOO69_04300 PF13091 PLD-like domain HOO69_04305 PF00209 Sodium:neurotransmitter symporter family HOO69_04310 PF00672 HAMP domain HOO69_04310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_04310 PF12729 Four helix bundle sensory module for signal transduction HOO69_04315 PF00849 RNA pseudouridylate synthase HOO69_04320 PF17785 PUA-like domain HOO69_04320 PF10672 S-adenosylmethionine-dependent methyltransferase HOO69_04340 PF13629 Pilus formation protein N terminal region HOO69_04340 PF00263 Bacterial type II and III secretion system protein HOO69_04340 PF04972 BON domain HOO69_04355 PF00437 Type II/IV secretion system protein HOO69_04395 PF01066 CDP-alcohol phosphatidyltransferase HOO69_04400 PF00005 ABC transporter HOO69_04405 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_04410 PF13416 Bacterial extracellular solute-binding protein HOO69_04420 PF06945 Protein of unknown function (DUF1289) HOO69_04440 PF12792 CSS motif domain associated with EAL HOO69_04440 PF00563 EAL domain HOO69_04450 PF03795 YCII-related domain HOO69_04455 PF03061 Thioesterase superfamily HOO69_04470 PF00072 Response regulator receiver domain HOO69_04470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_04475 PF00072 Response regulator receiver domain HOO69_04475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_04480 PF17327 Acyl homoserine lactone synthase HOO69_04490 PF04269 Protein of unknown function, DUF440 HOO69_04495 PF01132 Elongation factor P (EF-P) OB domain HOO69_04495 PF08207 Elongation factor P (EF-P) KOW-like domain HOO69_04495 PF09285 Elongation factor P, C-terminal HOO69_04505 PF03104 DNA polymerase family B, exonuclease domain HOO69_04505 PF00136 DNA polymerase family B HOO69_04510 PF00072 Response regulator receiver domain HOO69_04510 PF00196 Bacterial regulatory proteins, luxR family HOO69_04515 PF08459 UvrC Helix-hairpin-helix N-terminal HOO69_04515 PF02151 UvrB/uvrC motif HOO69_04515 PF01541 GIY-YIG catalytic domain HOO69_04520 PF01066 CDP-alcohol phosphatidyltransferase HOO69_04545 PF17158 Membrane-associated sensor, integral membrane domain HOO69_04545 PF00990 Diguanylate cyclase, GGDEF domain HOO69_04550 PF07995 Glucose / Sorbosone dehydrogenase HOO69_04580 PF00072 Response regulator receiver domain HOO69_04580 PF00990 Diguanylate cyclase, GGDEF domain HOO69_04585 PF03466 LysR substrate binding domain HOO69_04585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_04590 PF00583 Acetyltransferase (GNAT) family HOO69_04595 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HOO69_04595 PF01409 tRNA synthetases class II core domain (F) HOO69_04600 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HOO69_04600 PF03483 B3/4 domain HOO69_04600 PF01588 Putative tRNA binding domain HOO69_04600 PF03484 tRNA synthetase B5 domain HOO69_04600 PF03147 Ferredoxin-fold anticodon binding domain HOO69_04610 PF00474 Sodium:solute symporter family HOO69_04620 PF06178 Oligogalacturonate-specific porin protein (KdgM) HOO69_04625 PF11490 DNA polymerase III polC-type N-terminus II HOO69_04625 PF07733 Bacterial DNA polymerase III alpha NTPase domain HOO69_04625 PF14579 Helix-hairpin-helix motif HOO69_04625 PF02811 PHP domain HOO69_04625 PF00929 Exonuclease HOO69_04625 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HOO69_04630 PF00571 CBS domain HOO69_04635 PF07729 FCD domain HOO69_04635 PF00392 Bacterial regulatory proteins, gntR family HOO69_04640 PF07729 FCD domain HOO69_04640 PF00392 Bacterial regulatory proteins, gntR family HOO69_04660 PF05426 Alginate lyase HOO69_04660 PF07940 Heparinase II/III-like protein HOO69_04665 PF07883 Cupin domain HOO69_04670 PF00294 pfkB family carbohydrate kinase HOO69_04675 PF01081 KDPG and KHG aldolase HOO69_04680 PF00474 Sodium:solute symporter family HOO69_04685 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HOO69_04685 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HOO69_04695 PF03147 Ferredoxin-fold anticodon binding domain HOO69_04695 PF03484 tRNA synthetase B5 domain HOO69_04695 PF03483 B3/4 domain HOO69_04695 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HOO69_04695 PF01588 Putative tRNA binding domain HOO69_04700 PF02653 Branched-chain amino acid transport system / permease component HOO69_04705 PF02653 Branched-chain amino acid transport system / permease component HOO69_04710 PF00005 ABC transporter HOO69_04720 PF04198 Putative sugar-binding domain HOO69_04725 PF00248 Aldo/keto reductase family HOO69_04730 PF01266 FAD dependent oxidoreductase HOO69_04730 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HOO69_04735 PF01791 DeoC/LacD family aldolase HOO69_04740 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HOO69_04740 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HOO69_04745 PF00465 Iron-containing alcohol dehydrogenase HOO69_04750 PF00171 Aldehyde dehydrogenase family HOO69_04755 PF02412 Thrombospondin type 3 repeat HOO69_04755 PF03422 Carbohydrate binding module (family 6) HOO69_04760 PF09339 IclR helix-turn-helix domain HOO69_04760 PF01614 Bacterial transcriptional regulator HOO69_04765 PF01614 Bacterial transcriptional regulator HOO69_04765 PF09339 IclR helix-turn-helix domain HOO69_04770 PF08450 SMP-30/Gluconolactonase/LRE-like region HOO69_04780 PF03466 LysR substrate binding domain HOO69_04780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_04785 PF17954 Quercetinase C-terminal cupin domain HOO69_04785 PF02678 Pirin HOO69_04795 PF02378 Phosphotransferase system, EIIC HOO69_04795 PF00367 phosphotransferase system, EIIB HOO69_04800 PF00356 Bacterial regulatory proteins, lacI family HOO69_04805 PF08244 Glycosyl hydrolases family 32 C terminal HOO69_04805 PF00251 Glycosyl hydrolases family 32 N-terminal domain HOO69_04810 PF00294 pfkB family carbohydrate kinase HOO69_04815 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HOO69_04815 PF00356 Bacterial regulatory proteins, lacI family HOO69_04825 PF01554 MatE HOO69_04830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_04830 PF03466 LysR substrate binding domain HOO69_04835 PF03577 Peptidase family C69 HOO69_04840 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HOO69_04840 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HOO69_04850 PF00857 Isochorismatase family HOO69_04865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HOO69_04870 PF01588 Putative tRNA binding domain HOO69_04870 PF08264 Anticodon-binding domain of tRNA HOO69_04870 PF09334 tRNA synthetases class I (M) HOO69_04910 PF01817 Chorismate mutase type II HOO69_04915 PF03831 PhnA domain HOO69_04915 PF08274 PhnA Zinc-Ribbon HOO69_04920 PF13411 MerR HTH family regulatory protein HOO69_04925 PF02627 Carboxymuconolactone decarboxylase family HOO69_04940 PF01810 LysE type translocator HOO69_05010 PF02074 Carboxypeptidase Taq (M32) metallopeptidase HOO69_05015 PF01810 LysE type translocator HOO69_05030 PF01235 Sodium:alanine symporter family HOO69_05055 PF03707 Bacterial signalling protein N terminal repeat HOO69_05055 PF00990 Diguanylate cyclase, GGDEF domain HOO69_05055 PF00563 EAL domain HOO69_05060 PF07687 Peptidase dimerisation domain HOO69_05060 PF01546 Peptidase family M20/M25/M40 HOO69_05065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HOO69_05070 PF04209 homogentisate 1,2-dioxygenase HOO69_05080 PF14497 Glutathione S-transferase, C-terminal domain HOO69_05080 PF02798 Glutathione S-transferase, N-terminal domain HOO69_05100 PF13488 Glycine zipper HOO69_05100 PF00691 OmpA family HOO69_05115 PF01565 FAD binding domain HOO69_05115 PF02913 FAD linked oxidases, C-terminal domain HOO69_05115 PF13183 4Fe-4S dicluster domain HOO69_05120 PF04191 Phospholipid methyltransferase HOO69_05130 PF01175 Urocanase Rossmann-like domain HOO69_05130 PF17392 Urocanase C-terminal domain HOO69_05130 PF17391 Urocanase N-terminal domain HOO69_05135 PF00221 Aromatic amino acid lyase HOO69_05140 PF00491 Arginase family HOO69_05145 PF01979 Amidohydrolase family HOO69_05150 PF07702 UTRA domain HOO69_05150 PF00392 Bacterial regulatory proteins, gntR family HOO69_05155 PF07070 SpoOM protein HOO69_05175 PF02222 ATP-grasp domain HOO69_05180 PF01966 HD domain HOO69_05180 PF11871 Domain of unknown function (DUF3391) HOO69_05185 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HOO69_05185 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region HOO69_05190 PF04172 LrgB-like family HOO69_05195 PF03788 LrgA family HOO69_05200 PF00929 Exonuclease HOO69_05200 PF08411 Exonuclease C-terminal HOO69_05240 PF13460 NAD(P)H-binding HOO69_05245 PF01613 Flavin reductase like domain HOO69_05255 PF02654 Cobalamin-5-phosphate synthase HOO69_05260 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HOO69_05275 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HOO69_05280 PF01032 FecCD transport family HOO69_05295 PF00990 Diguanylate cyclase, GGDEF domain HOO69_05310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_05310 PF03466 LysR substrate binding domain HOO69_05315 PF00005 ABC transporter HOO69_05330 PF01863 Protein of unknown function DUF45 HOO69_05335 PF05971 RNA methyltransferase HOO69_05350 PF00561 alpha/beta hydrolase fold HOO69_05375 PF13426 PAS domain HOO69_05375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_05375 PF08447 PAS fold HOO69_05385 PF01914 MarC family integral membrane protein HOO69_05400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HOO69_05415 PF01970 Tripartite tricarboxylate transporter TctA family HOO69_05480 PF10431 C-terminal, D2-small domain, of ClpB protein HOO69_05480 PF00004 ATPase family associated with various cellular activities (AAA) HOO69_05480 PF07724 AAA domain (Cdc48 subfamily) HOO69_05480 PF17871 AAA lid domain HOO69_05535 PF04717 Type VI secretion system, phage-baseplate injector HOO69_05535 PF16671 Actin cross-linking domain HOO69_05540 PF04389 Peptidase family M28 HOO69_05540 PF02225 PA domain HOO69_05560 PF00285 Citrate synthase, C-terminal domain HOO69_05565 PF00694 Aconitase C-terminal domain HOO69_05565 PF00330 Aconitase family (aconitate hydratase) HOO69_05570 PF04303 PrpF protein HOO69_05575 PF13193 AMP-binding enzyme C-terminal domain HOO69_05575 PF00501 AMP-binding enzyme HOO69_05575 PF16177 Acetyl-coenzyme A synthetase N-terminus HOO69_05590 PF00672 HAMP domain HOO69_05590 PF02743 Cache domain HOO69_05590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_05600 PF04055 Radical SAM superfamily HOO69_05605 PF06508 Queuosine biosynthesis protein QueC HOO69_05610 PF17158 Membrane-associated sensor, integral membrane domain HOO69_05610 PF00990 Diguanylate cyclase, GGDEF domain HOO69_05620 PF05736 OprF membrane domain HOO69_05620 PF00691 OmpA family HOO69_05640 PF17785 PUA-like domain HOO69_05640 PF10672 S-adenosylmethionine-dependent methyltransferase HOO69_05645 PF00672 HAMP domain HOO69_05645 PF02743 Cache domain HOO69_05645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_05650 PF00708 Acylphosphatase HOO69_05655 PF04358 DsrC like protein HOO69_05660 PF01027 Inhibitor of apoptosis-promoting Bax1 HOO69_05665 PF00005 ABC transporter HOO69_05670 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_05675 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_05680 PF00497 Bacterial extracellular solute-binding proteins, family 3 HOO69_05685 PF14824 Sirohaem biosynthesis protein central HOO69_05685 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HOO69_05685 PF10414 Sirohaem synthase dimerisation region HOO69_05690 PF04461 Protein of unknown function (DUF520) HOO69_05695 PF00793 DAHP synthetase I family HOO69_05720 PF02470 MlaD protein HOO69_05725 PF04403 Paraquat-inducible protein A HOO69_05730 PF00005 ABC transporter HOO69_05730 PF00664 ABC transporter transmembrane region HOO69_05735 PF13185 GAF domain HOO69_05740 PF04352 ProQ/FINO family HOO69_05740 PF17516 ProQ C-terminal domain HOO69_05745 PF11818 C-terminal domain of tail specific protease (DUF3340) HOO69_05745 PF17804 Tail specific protease N-terminal domain HOO69_05745 PF00595 PDZ domain HOO69_05745 PF03572 Peptidase family S41 HOO69_05755 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HOO69_05755 PF01433 Peptidase family M1 domain HOO69_05755 PF11940 Domain of unknown function (DUF3458) Ig-like fold HOO69_05765 PF05088 Bacterial NAD-glutamate dehydrogenase HOO69_05770 PF01180 Dihydroorotate dehydrogenase HOO69_05775 PF07126 Cell-division protein ZapC HOO69_05780 PF01170 Putative RNA methylase family UPF0020 HOO69_05780 PF02926 THUMP domain HOO69_05780 PF10672 S-adenosylmethionine-dependent methyltransferase HOO69_05790 PF00005 ABC transporter HOO69_05790 PF12848 ABC transporter HOO69_05790 PF16326 ABC transporter C-terminal domain HOO69_05800 PF04957 Ribosome modulation factor HOO69_05805 PF07977 FabA-like domain HOO69_05810 PF05362 Lon protease (S16) C-terminal proteolytic domain HOO69_05810 PF13654 AAA domain HOO69_05815 PF17414 MatP C-terminal ribbon-helix-helix domain HOO69_05815 PF06303 MatP N-terminal domain HOO69_05840 PF01411 tRNA synthetases class II (A) HOO69_05840 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HOO69_05840 PF02272 DHHA1 domain HOO69_05845 PF08241 Methyltransferase domain HOO69_05950 PF00027 Cyclic nucleotide-binding domain HOO69_05950 PF00520 Ion transport protein HOO69_05970 PF05638 Type VI secretion system effector, Hcp HOO69_06000 PF00115 Cytochrome C and Quinol oxidase polypeptide I HOO69_06015 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HOO69_06015 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HOO69_06025 PF00403 Heavy-metal-associated domain HOO69_06040 PF13545 Crp-like helix-turn-helix domain HOO69_06040 PF00027 Cyclic nucleotide-binding domain HOO69_06045 PF00582 Universal stress protein family HOO69_06050 PF01171 PP-loop family HOO69_06055 PF01554 MatE HOO69_06075 PF08402 TOBE domain HOO69_06075 PF00005 ABC transporter HOO69_06080 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_06085 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_06090 PF13416 Bacterial extracellular solute-binding protein HOO69_06095 PF13416 Bacterial extracellular solute-binding protein HOO69_06100 PF17152 Periplasmic sensor domain HOO69_06100 PF00990 Diguanylate cyclase, GGDEF domain HOO69_06105 PF02146 Sir2 family HOO69_06110 PF00909 Ammonium Transporter Family HOO69_06125 PF13247 4Fe-4S dicluster domain HOO69_06130 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HOO69_06130 PF01568 Molydopterin dinucleotide binding domain HOO69_06130 PF00384 Molybdopterin oxidoreductase HOO69_06160 PF02634 FdhD/NarQ family HOO69_06165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_06165 PF02743 Cache domain HOO69_06165 PF00672 HAMP domain HOO69_06170 PF08212 Lipocalin-like domain HOO69_06205 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HOO69_06235 PF00665 Integrase core domain HOO69_06235 PF13276 HTH-like domain HOO69_06235 PF13333 Integrase core domain HOO69_06250 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HOO69_06250 PF01872 RibD C-terminal domain HOO69_06295 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HOO69_06295 PF01872 RibD C-terminal domain HOO69_06375 PF08264 Anticodon-binding domain of tRNA HOO69_06375 PF09334 tRNA synthetases class I (M) HOO69_06375 PF01588 Putative tRNA binding domain HOO69_06430 PF12848 ABC transporter HOO69_06430 PF00005 ABC transporter HOO69_06440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_06440 PF00512 His Kinase A (phospho-acceptor) domain HOO69_06445 PF00072 Response regulator receiver domain HOO69_06445 PF00158 Sigma-54 interaction domain HOO69_06445 PF02954 Bacterial regulatory protein, Fis family HOO69_06450 PF12849 PBP superfamily domain HOO69_06455 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_06460 PF08402 TOBE domain HOO69_06460 PF00005 ABC transporter HOO69_06465 PF12804 MobA-like NTP transferase domain HOO69_06470 PF00994 Probable molybdopterin binding domain HOO69_06470 PF03454 MoeA C-terminal region (domain IV) HOO69_06470 PF03453 MoeA N-terminal region (domain I and II) HOO69_06480 PF00480 ROK family HOO69_06495 PF12729 Four helix bundle sensory module for signal transduction HOO69_06495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_06495 PF00672 HAMP domain HOO69_06500 PF00877 NlpC/P60 family HOO69_06510 PF03881 Fructosamine kinase HOO69_06520 PF00677 Lumazine binding domain HOO69_06525 PF01554 MatE HOO69_06535 PF01740 STAS domain HOO69_06540 PF01389 OmpA-like transmembrane domain HOO69_06540 PF00691 OmpA family HOO69_06560 PF00672 HAMP domain HOO69_06560 PF00512 His Kinase A (phospho-acceptor) domain HOO69_06560 PF01627 Hpt domain HOO69_06560 PF17149 Periplasmic sensor domain found in signal transduction proteins HOO69_06560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_06560 PF00072 Response regulator receiver domain HOO69_06565 PF00072 Response regulator receiver domain HOO69_06565 PF02954 Bacterial regulatory protein, Fis family HOO69_06565 PF00158 Sigma-54 interaction domain HOO69_06575 PF13439 Glycosyltransferase Family 4 HOO69_06575 PF00534 Glycosyl transferases group 1 HOO69_06595 PF12464 Maltose acetyltransferase HOO69_06595 PF00132 Bacterial transferase hexapeptide (six repeats) HOO69_06610 PF13579 Glycosyl transferase 4-like domain HOO69_06610 PF00534 Glycosyl transferases group 1 HOO69_06620 PF02397 Bacterial sugar transferase HOO69_06635 PF00512 His Kinase A (phospho-acceptor) domain HOO69_06635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_06640 PF00072 Response regulator receiver domain HOO69_06640 PF00486 Transcriptional regulatory protein, C terminal HOO69_06665 PF01212 Beta-eliminating lyase HOO69_06680 PF00486 Transcriptional regulatory protein, C terminal HOO69_06680 PF00072 Response regulator receiver domain HOO69_06685 PF03222 Tryptophan/tyrosine permease family HOO69_06690 PF02195 ParB-like nuclease domain HOO69_06695 PF11922 Domain of unknown function (DUF3440) HOO69_06695 PF01507 Phosphoadenosine phosphosulfate reductase family HOO69_06735 PF14824 Sirohaem biosynthesis protein central HOO69_06735 PF10414 Sirohaem synthase dimerisation region HOO69_06735 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HOO69_06740 PF01226 Formate/nitrite transporter HOO69_06745 PF13806 Rieske-like [2Fe-2S] domain HOO69_06750 PF18267 Rubredoxin NAD+ reductase C-terminal domain HOO69_06750 PF04324 BFD-like [2Fe-2S] binding domain HOO69_06750 PF07992 Pyridine nucleotide-disulphide oxidoreductase HOO69_06750 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HOO69_06750 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HOO69_06755 PF00672 HAMP domain HOO69_06755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_06770 PF17151 Periplasmic sensor domain HOO69_06770 PF00990 Diguanylate cyclase, GGDEF domain HOO69_06790 PF00072 Response regulator receiver domain HOO69_06790 PF12431 Transcriptional regulator HOO69_06795 PF00989 PAS fold HOO69_06795 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HOO69_06795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_06795 PF17203 Single cache domain 3 HOO69_06810 PF03544 Gram-negative bacterial TonB protein C-terminal HOO69_06815 PF02472 Biopolymer transport protein ExbD/TolR HOO69_06820 PF01618 MotA/TolQ/ExbB proton channel family HOO69_06825 PF01618 MotA/TolQ/ExbB proton channel family HOO69_06835 PF07715 TonB-dependent Receptor Plug Domain HOO69_06835 PF00593 TonB dependent receptor HOO69_06840 PF00512 His Kinase A (phospho-acceptor) domain HOO69_06840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_06840 PF16750 Sensor domain of 2-component histidine kinase HOO69_06840 PF00672 HAMP domain HOO69_06845 PF00072 Response regulator receiver domain HOO69_06845 PF00486 Transcriptional regulatory protein, C terminal HOO69_06855 PF00056 lactate/malate dehydrogenase, NAD binding domain HOO69_06855 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HOO69_06865 PF03009 Glycerophosphoryl diester phosphodiesterase family HOO69_06875 PF01259 SAICAR synthetase HOO69_06895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_06895 PF03466 LysR substrate binding domain HOO69_06900 PF04055 Radical SAM superfamily HOO69_06905 PF11230 Protein of unknown function (DUF3029) HOO69_06910 PF17200 Single Cache domain 2 HOO69_06910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_06910 PF00672 HAMP domain HOO69_06920 PF03989 DNA gyrase C-terminal domain, beta-propeller HOO69_06920 PF00521 DNA gyrase/topoisomerase IV, subunit A HOO69_06935 PF02867 Ribonucleotide reductase, barrel domain HOO69_06935 PF00317 Ribonucleotide reductase, all-alpha domain HOO69_06935 PF03477 ATP cone domain HOO69_06940 PF00268 Ribonucleotide reductase, small chain HOO69_06970 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HOO69_06975 PF16653 Saccharopine dehydrogenase C-terminal domain HOO69_06975 PF03435 Saccharopine dehydrogenase NADP binding domain HOO69_06980 PF00202 Aminotransferase class-III HOO69_06995 PF03422 Carbohydrate binding module (family 6) HOO69_06995 PF02412 Thrombospondin type 3 repeat HOO69_07000 PF06965 Na+/H+ antiporter 1 HOO69_07015 PF00005 ABC transporter HOO69_07020 PF01554 MatE HOO69_07025 PF13460 NAD(P)H-binding HOO69_07025 PF11066 Protein of unknown function (DUF2867) HOO69_07035 PF07690 Major Facilitator Superfamily HOO69_07040 PF00849 RNA pseudouridylate synthase HOO69_07040 PF01479 S4 domain HOO69_07045 PF04851 Type III restriction enzyme, res subunit HOO69_07045 PF00271 Helicase conserved C-terminal domain HOO69_07055 PF00486 Transcriptional regulatory protein, C terminal HOO69_07055 PF00072 Response regulator receiver domain HOO69_07060 PF08521 Two-component sensor kinase N-terminal HOO69_07060 PF00512 His Kinase A (phospho-acceptor) domain HOO69_07060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_07075 PF00486 Transcriptional regulatory protein, C terminal HOO69_07075 PF18500 CadC C-terminal domain 1 HOO69_07080 PF00873 AcrB/AcrD/AcrF family HOO69_07085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HOO69_07130 PF04717 Type VI secretion system, phage-baseplate injector HOO69_07130 PF16671 Actin cross-linking domain HOO69_07140 PF00535 Glycosyl transferase family 2 HOO69_07145 PF01386 Ribosomal L25p family HOO69_07150 PF01040 UbiA prenyltransferase family HOO69_07160 PF00510 Cytochrome c oxidase subunit III HOO69_07165 PF00115 Cytochrome C and Quinol oxidase polypeptide I HOO69_07170 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HOO69_07170 PF06481 COX Aromatic Rich Motif HOO69_07185 PF03466 LysR substrate binding domain HOO69_07185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_07190 PF01039 Carboxyl transferase domain HOO69_07190 PF17848 Acetyl-coA carboxylase zinc finger domain HOO69_07195 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HOO69_07205 PF07683 Cobalamin synthesis protein cobW C-terminal domain HOO69_07205 PF02492 CobW/HypB/UreG, nucleotide-binding domain HOO69_07215 PF00268 Ribonucleotide reductase, small chain HOO69_07220 PF08343 Ribonucleotide reductase N-terminal HOO69_07220 PF00317 Ribonucleotide reductase, all-alpha domain HOO69_07220 PF02867 Ribonucleotide reductase, barrel domain HOO69_07225 PF07972 NrdI Flavodoxin like HOO69_07230 PF00462 Glutaredoxin HOO69_07235 PF01521 Iron-sulphur cluster biosynthesis HOO69_07240 PF01458 Uncharacterized protein family (UPF0051) HOO69_07245 PF00005 ABC transporter HOO69_07250 PF01458 Uncharacterized protein family (UPF0051) HOO69_07255 PF00266 Aminotransferase class-V HOO69_07260 PF02657 Fe-S metabolism associated domain HOO69_07265 PF00127 Copper binding proteins, plastocyanin/azurin family HOO69_07270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_07270 PF00672 HAMP domain HOO69_07270 PF02743 Cache domain HOO69_07275 PF00282 Pyridoxal-dependent decarboxylase conserved domain HOO69_07285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HOO69_07295 PF14602 Hexapeptide repeat of succinyl-transferase HOO69_07295 PF12464 Maltose acetyltransferase HOO69_07300 PF03150 Di-haem cytochrome c peroxidase HOO69_07300 PF14376 Haem-binding domain HOO69_07300 PF00034 Cytochrome c HOO69_07330 PF16671 Actin cross-linking domain HOO69_07330 PF04717 Type VI secretion system, phage-baseplate injector HOO69_07340 PF00892 EamA-like transporter family HOO69_07345 PF13520 Amino acid permease HOO69_07355 PF01734 Patatin-like phospholipase HOO69_07375 PF00196 Bacterial regulatory proteins, luxR family HOO69_07375 PF00072 Response regulator receiver domain HOO69_07380 PF07730 Histidine kinase HOO69_07380 PF17200 Single Cache domain 2 HOO69_07390 PF03480 Bacterial extracellular solute-binding protein, family 7 HOO69_07405 PF00753 Metallo-beta-lactamase superfamily HOO69_07410 PF05951 Bacterial protein of unknown function (DUF882) HOO69_07415 PF01471 Putative peptidoglycan binding domain HOO69_07415 PF03734 L,D-transpeptidase catalytic domain HOO69_07440 PF00925 GTP cyclohydrolase II HOO69_07450 PF00990 Diguanylate cyclase, GGDEF domain HOO69_07465 PF13302 Acetyltransferase (GNAT) domain HOO69_07470 PF18024 Helix-turn-helix domain HOO69_07470 PF00158 Sigma-54 interaction domain HOO69_07475 PF05128 Domain of unknown function (DUF697) HOO69_07480 PF04317 YcjX-like family, DUF463 HOO69_07495 PF04715 Anthranilate synthase component I, N terminal region HOO69_07495 PF00425 chorismate binding enzyme HOO69_07500 PF00072 Response regulator receiver domain HOO69_07500 PF09308 LuxQ, periplasmic HOO69_07500 PF00512 His Kinase A (phospho-acceptor) domain HOO69_07500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_07510 PF00293 NUDIX domain HOO69_07515 PF03222 Tryptophan/tyrosine permease family HOO69_07520 PF03315 Serine dehydratase beta chain HOO69_07520 PF03313 Serine dehydratase alpha chain HOO69_07530 PF04231 Endonuclease I HOO69_07535 PF03222 Tryptophan/tyrosine permease family HOO69_07545 PF01740 STAS domain HOO69_07545 PF00916 Sulfate permease family HOO69_07555 PF00672 HAMP domain HOO69_07555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_07555 PF12729 Four helix bundle sensory module for signal transduction HOO69_07560 PF00152 tRNA synthetases class II (D, K and N) HOO69_07560 PF01336 OB-fold nucleic acid binding domain HOO69_07575 PF00392 Bacterial regulatory proteins, gntR family HOO69_07575 PF00155 Aminotransferase class I and II HOO69_07585 PF00672 HAMP domain HOO69_07585 PF01966 HD domain HOO69_07590 PF00155 Aminotransferase class I and II HOO69_07610 PF04408 Helicase associated domain (HA2) HOO69_07610 PF00271 Helicase conserved C-terminal domain HOO69_07610 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HOO69_07610 PF11898 Domain of unknown function (DUF3418) HOO69_07610 PF00270 DEAD/DEAH box helicase HOO69_07615 PF00390 Malic enzyme, N-terminal domain HOO69_07615 PF03949 Malic enzyme, NAD binding domain HOO69_07625 PF02698 DUF218 domain HOO69_07630 PF00990 Diguanylate cyclase, GGDEF domain HOO69_07630 PF07694 5TMR of 5TMR-LYT HOO69_07640 PF00266 Aminotransferase class-V HOO69_07650 PF07992 Pyridine nucleotide-disulphide oxidoreductase HOO69_07655 PF00664 ABC transporter transmembrane region HOO69_07655 PF00005 ABC transporter HOO69_07660 PF00664 ABC transporter transmembrane region HOO69_07660 PF00005 ABC transporter HOO69_07665 PF00360 Phytochrome region HOO69_07665 PF00990 Diguanylate cyclase, GGDEF domain HOO69_07665 PF01590 GAF domain HOO69_07665 PF00563 EAL domain HOO69_07670 PF00563 EAL domain HOO69_07670 PF13185 GAF domain HOO69_07670 PF00990 Diguanylate cyclase, GGDEF domain HOO69_07680 PF01479 S4 domain HOO69_07680 PF00849 RNA pseudouridylate synthase HOO69_07685 PF01300 Telomere recombination HOO69_07690 PF02811 PHP domain HOO69_07695 PF08056 Tryptophan operon leader peptide HOO69_07700 PF00425 chorismate binding enzyme HOO69_07700 PF04715 Anthranilate synthase component I, N terminal region HOO69_07705 PF00117 Glutamine amidotransferase class-I HOO69_07710 PF02885 Glycosyl transferase family, helical bundle domain HOO69_07710 PF00591 Glycosyl transferase family, a/b domain HOO69_07715 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HOO69_07715 PF00218 Indole-3-glycerol phosphate synthase HOO69_07720 PF00291 Pyridoxal-phosphate dependent enzyme HOO69_07725 PF00290 Tryptophan synthase alpha chain HOO69_07730 PF00375 Sodium:dicarboxylate symporter family HOO69_07740 PF00005 ABC transporter HOO69_07740 PF00664 ABC transporter transmembrane region HOO69_07750 PF00271 Helicase conserved C-terminal domain HOO69_07750 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HOO69_07750 PF11898 Domain of unknown function (DUF3418) HOO69_07750 PF00270 DEAD/DEAH box helicase HOO69_07750 PF04408 Helicase associated domain (HA2) HOO69_07780 PF00990 Diguanylate cyclase, GGDEF domain HOO69_07780 PF08448 PAS fold HOO69_07790 PF00012 Hsp70 protein HOO69_07795 PF00012 Hsp70 protein HOO69_07820 PF07720 Tetratricopeptide repeat HOO69_07825 PF04792 V antigen (LcrV) protein HOO69_07840 PF00771 FHIPEP family HOO69_07860 PF09059 TyeA HOO69_07865 PF07201 HrpJ-like domain HOO69_07870 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HOO69_07870 PF18269 T3SS EscN ATPase C-terminal domain HOO69_07870 PF02874 ATP synthase alpha/beta family, beta-barrel domain HOO69_07885 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HOO69_07890 PF00813 FliP family HOO69_07895 PF01313 Bacterial export proteins, family 3 HOO69_07900 PF01311 Bacterial export proteins, family 1 HOO69_07905 PF01312 FlhB HrpN YscU SpaS Family HOO69_07930 PF02108 Flagellar assembly protein FliH HOO69_07940 PF01514 Secretory protein of YscJ/FliF family HOO69_07945 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI HOO69_07955 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) HOO69_07960 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF HOO69_07975 PF03958 Bacterial type II/III secretion system short domain HOO69_07975 PF00263 Bacterial type II and III secretion system protein HOO69_07990 PF12833 Helix-turn-helix domain HOO69_08025 PF01810 LysE type translocator HOO69_08040 PF01323 DSBA-like thioredoxin domain HOO69_08050 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HOO69_08050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HOO69_08060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_08060 PF03466 LysR substrate binding domain HOO69_08070 PF13302 Acetyltransferase (GNAT) domain HOO69_08080 PF02566 OsmC-like protein HOO69_08085 PF01717 Cobalamin-independent synthase, Catalytic domain HOO69_08085 PF08267 Cobalamin-independent synthase, N-terminal domain HOO69_08090 PF03466 LysR substrate binding domain HOO69_08090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_08105 PF00563 EAL domain HOO69_08105 PF03707 Bacterial signalling protein N terminal repeat HOO69_08105 PF00990 Diguanylate cyclase, GGDEF domain HOO69_08110 PF00563 EAL domain HOO69_08110 PF03707 Bacterial signalling protein N terminal repeat HOO69_08110 PF00990 Diguanylate cyclase, GGDEF domain HOO69_08115 PF08497 Radical SAM N-terminal HOO69_08115 PF04055 Radical SAM superfamily HOO69_08115 PF11842 Domain of unknown function (DUF3362) HOO69_08120 PF00990 Diguanylate cyclase, GGDEF domain HOO69_08120 PF03707 Bacterial signalling protein N terminal repeat HOO69_08120 PF13188 PAS domain HOO69_08120 PF00563 EAL domain HOO69_08125 PF01339 CheB methylesterase HOO69_08125 PF00072 Response regulator receiver domain HOO69_08130 PF03705 CheR methyltransferase, all-alpha domain HOO69_08130 PF01739 CheR methyltransferase, SAM binding domain HOO69_08135 PF01584 CheW-like domain HOO69_08140 PF01584 CheW-like domain HOO69_08145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_08145 PF00672 HAMP domain HOO69_08150 PF09078 CheY binding HOO69_08150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_08150 PF02895 Signal transducing histidine kinase, homodimeric domain HOO69_08150 PF01627 Hpt domain HOO69_08150 PF01584 CheW-like domain HOO69_08160 PF00072 Response regulator receiver domain HOO69_08170 PF00266 Aminotransferase class-V HOO69_08180 PF00497 Bacterial extracellular solute-binding proteins, family 3 HOO69_08180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_08180 PF00512 His Kinase A (phospho-acceptor) domain HOO69_08195 PF04993 TfoX N-terminal domain HOO69_08195 PF04994 TfoX C-terminal domain HOO69_08205 PF03956 Lysine exporter LysO HOO69_08215 PF00282 Pyridoxal-dependent decarboxylase conserved domain HOO69_08220 PF01380 SIS domain HOO69_08220 PF01418 Helix-turn-helix domain, rpiR family HOO69_08225 PF00171 Aldehyde dehydrogenase family HOO69_08225 PF00465 Iron-containing alcohol dehydrogenase HOO69_08230 PF00462 Glutaredoxin HOO69_08235 PF02080 TrkA-C domain HOO69_08235 PF06826 Predicted Permease Membrane Region HOO69_08240 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_08245 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_08250 PF00497 Bacterial extracellular solute-binding proteins, family 3 HOO69_08255 PF00005 ABC transporter HOO69_08265 PF02901 Pyruvate formate lyase-like HOO69_08265 PF01228 Glycine radical HOO69_08275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_08275 PF00672 HAMP domain HOO69_08280 PF04055 Radical SAM superfamily HOO69_08305 PF06798 PrkA serine protein kinase C-terminal domain HOO69_08305 PF08298 PrkA AAA domain HOO69_08310 PF04285 Protein of unknown function (DUF444) HOO69_08315 PF04293 SpoVR like protein HOO69_08320 PF02348 Cytidylyltransferase HOO69_08330 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HOO69_08335 PF00005 ABC transporter HOO69_08335 PF00664 ABC transporter transmembrane region HOO69_08340 PF03772 Competence protein HOO69_08340 PF00753 Metallo-beta-lactamase superfamily HOO69_08340 PF13567 Domain of unknown function (DUF4131) HOO69_08365 PF02687 FtsX-like permease family HOO69_08365 PF12704 MacB-like periplasmic core domain HOO69_08370 PF00005 ABC transporter HOO69_08375 PF02687 FtsX-like permease family HOO69_08375 PF12704 MacB-like periplasmic core domain HOO69_08385 PF03461 TRCF domain HOO69_08385 PF17757 UvrB interaction domain HOO69_08385 PF02559 CarD-like/TRCF domain HOO69_08385 PF00270 DEAD/DEAH box helicase HOO69_08385 PF00271 Helicase conserved C-terminal domain HOO69_08395 PF13302 Acetyltransferase (GNAT) domain HOO69_08400 PF07992 Pyridine nucleotide-disulphide oxidoreductase HOO69_08405 PF05728 Uncharacterised protein family (UPF0227) HOO69_08415 PF08139 Prokaryotic membrane lipoprotein lipid attachment site HOO69_08415 PF13036 Peptidoglycan-synthase activator LpoB HOO69_08430 PF01230 HIT domain HOO69_08435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_08435 PF00672 HAMP domain HOO69_08445 PF07840 FadR C-terminal domain HOO69_08445 PF00392 Bacterial regulatory proteins, gntR family HOO69_08450 PF06450 Bacterial Na+/H+ antiporter B (NhaB) HOO69_08455 PF02600 Disulfide bond formation protein DsbB HOO69_08460 PF01580 FtsK/SpoIIIE family HOO69_08460 PF09397 Ftsk gamma domain HOO69_08460 PF17854 FtsK alpha domain HOO69_08460 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HOO69_08465 PF01037 Lrp/AsnC ligand binding domain HOO69_08470 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HOO69_08470 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HOO69_08475 PF04217 Protein of unknown function, DUF412 HOO69_08480 PF00871 Acetokinase family HOO69_08485 PF07085 DRTGG domain HOO69_08485 PF01515 Phosphate acetyl/butaryl transferase HOO69_08490 PF17158 Membrane-associated sensor, integral membrane domain HOO69_08490 PF00990 Diguanylate cyclase, GGDEF domain HOO69_08495 PF13409 Glutathione S-transferase, N-terminal domain HOO69_08500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HOO69_08500 PF00005 ABC transporter HOO69_08505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HOO69_08505 PF00005 ABC transporter HOO69_08510 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_08510 PF12911 N-terminal TM domain of oligopeptide transport permease C HOO69_08515 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_08520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HOO69_08530 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HOO69_08545 PF02687 FtsX-like permease family HOO69_08545 PF00005 ABC transporter HOO69_08545 PF12704 MacB-like periplasmic core domain HOO69_08550 PF00005 ABC transporter HOO69_08550 PF02687 FtsX-like permease family HOO69_08550 PF12704 MacB-like periplasmic core domain HOO69_08555 PF02687 FtsX-like permease family HOO69_08555 PF12704 MacB-like periplasmic core domain HOO69_08565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HOO69_08575 PF00873 AcrB/AcrD/AcrF family HOO69_08595 PF01757 Acyltransferase family HOO69_08615 PF13609 Gram-negative porin HOO69_08625 PF07969 Amidohydrolase family HOO69_08650 PF00990 Diguanylate cyclase, GGDEF domain HOO69_08660 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HOO69_08665 PF09619 Type III secretion system lipoprotein chaperone (YscW) HOO69_08680 PF13404 AsnC-type helix-turn-helix domain HOO69_08680 PF01037 Lrp/AsnC ligand binding domain HOO69_08685 PF00291 Pyridoxal-phosphate dependent enzyme HOO69_08705 PF07690 Major Facilitator Superfamily HOO69_08710 PF03601 Conserved hypothetical protein 698 HOO69_08720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_08720 PF03466 LysR substrate binding domain HOO69_08725 PF00367 phosphotransferase system, EIIB HOO69_08725 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HOO69_08725 PF02378 Phosphotransferase system, EIIC HOO69_08730 PF00501 AMP-binding enzyme HOO69_08730 PF13193 AMP-binding enzyme C-terminal domain HOO69_08735 PF13378 Enolase C-terminal domain-like HOO69_08740 PF00378 Enoyl-CoA hydratase/isomerase HOO69_08745 PF12697 Alpha/beta hydrolase family HOO69_08750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HOO69_08750 PF16582 Middle domain of thiamine pyrophosphate HOO69_08750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HOO69_08755 PF00425 chorismate binding enzyme HOO69_08760 PF00155 Aminotransferase class I and II HOO69_08770 PF03466 LysR substrate binding domain HOO69_08770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_08775 PF13533 Biotin-lipoyl like HOO69_08780 PF07690 Major Facilitator Superfamily HOO69_08785 PF13286 Phosphohydrolase-associated domain HOO69_08785 PF01966 HD domain HOO69_08790 PF00962 Adenosine/AMP deaminase HOO69_08805 PF00270 DEAD/DEAH box helicase HOO69_08805 PF00271 Helicase conserved C-terminal domain HOO69_08830 PF03824 High-affinity nickel-transport protein HOO69_08835 PF02583 Metal-sensitive transcriptional repressor HOO69_08840 PF08496 Peptidase family S49 N-terminal HOO69_08840 PF01343 Peptidase family S49 HOO69_08845 PF00106 short chain dehydrogenase HOO69_08860 PF01336 OB-fold nucleic acid binding domain HOO69_08860 PF02811 PHP domain HOO69_08860 PF14579 Helix-hairpin-helix motif HOO69_08860 PF07733 Bacterial DNA polymerase III alpha NTPase domain HOO69_08860 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HOO69_08865 PF00072 Response regulator receiver domain HOO69_08865 PF01584 CheW-like domain HOO69_08870 PF00480 ROK family HOO69_08875 PF00224 Pyruvate kinase, barrel domain HOO69_08875 PF02887 Pyruvate kinase, alpha/beta domain HOO69_08880 PF01734 Patatin-like phospholipase HOO69_08900 PF02378 Phosphotransferase system, EIIC HOO69_08900 PF00367 phosphotransferase system, EIIB HOO69_08905 PF01026 TatD related DNase HOO69_08910 PF09115 DNA polymerase III, delta subunit, C terminal HOO69_08915 PF02223 Thymidylate kinase HOO69_08920 PF02618 YceG-like family HOO69_08925 PF01063 Amino-transferase class IV HOO69_08930 PF02801 Beta-ketoacyl synthase, C-terminal domain HOO69_08930 PF00109 Beta-ketoacyl synthase, N-terminal domain HOO69_08935 PF00550 Phosphopantetheine attachment site HOO69_08945 PF00698 Acyl transferase domain HOO69_08950 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HOO69_08950 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HOO69_08955 PF02504 Fatty acid synthesis protein HOO69_08965 PF02620 Large ribosomal RNA subunit accumulation protein YceD HOO69_08970 PF02545 Maf-like protein HOO69_08975 PF00849 RNA pseudouridylate synthase HOO69_08975 PF01479 S4 domain HOO69_08980 PF00575 S1 RNA binding domain HOO69_08980 PF12111 Polyribonucleotide phosphorylase C terminal HOO69_08980 PF10150 Ribonuclease E/G family HOO69_08985 PF01740 STAS domain HOO69_08985 PF00916 Sulfate permease family HOO69_08990 PF00570 HRDC domain HOO69_08990 PF01612 3'-5' exonuclease HOO69_08995 PF00501 AMP-binding enzyme HOO69_08995 PF13193 AMP-binding enzyme C-terminal domain HOO69_09000 PF00561 alpha/beta hydrolase fold HOO69_09005 PF03843 Outer membrane lipoprotein Slp family HOO69_09015 PF00814 Glycoprotease family HOO69_09020 PF13307 Helicase C-terminal domain HOO69_09020 PF04851 Type III restriction enzyme, res subunit HOO69_09030 PF00551 Formyl transferase HOO69_09030 PF01842 ACT domain HOO69_09035 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HOO69_09035 PF07992 Pyridine nucleotide-disulphide oxidoreductase HOO69_09040 PF01343 Peptidase family S49 HOO69_09055 PF00083 Sugar (and other) transporter HOO69_09060 PF17763 Glutaminase/Asparaginase C-terminal domain HOO69_09060 PF00710 Asparaginase, N-terminal HOO69_09065 PF04389 Peptidase family M28 HOO69_09065 PF04151 Bacterial pre-peptidase C-terminal domain HOO69_09070 PF02403 Seryl-tRNA synthetase N-terminal domain HOO69_09070 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HOO69_09075 PF12002 MgsA AAA+ ATPase C terminal HOO69_09075 PF16193 AAA C-terminal domain HOO69_09075 PF00004 ATPase family associated with various cellular activities (AAA) HOO69_09080 PF03548 Outer membrane lipoprotein carrier protein LolA HOO69_09085 PF01043 SecA preprotein cross-linking domain HOO69_09085 PF07517 SecA DEAD-like domain HOO69_09085 PF07516 SecA Wing and Scaffold domain HOO69_09085 PF02810 SEC-C motif HOO69_09090 PF00114 Pilin (bacterial filament) HOO69_09090 PF07963 Prokaryotic N-terminal methylation motif HOO69_09095 PF01207 Dihydrouridine synthase (Dus) HOO69_09100 PF00990 Diguanylate cyclase, GGDEF domain HOO69_09105 PF00005 ABC transporter HOO69_09110 PF02653 Branched-chain amino acid transport system / permease component HOO69_09125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_09125 PF03466 LysR substrate binding domain HOO69_09135 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) HOO69_09145 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HOO69_09150 PF18073 Rubredoxin metal binding domain HOO69_09155 PF06305 Lipopolysaccharide assembly protein A domain HOO69_09160 PF00216 Bacterial DNA-binding protein HOO69_09165 PF00575 S1 RNA binding domain HOO69_09170 PF02224 Cytidylate kinase HOO69_09180 PF13145 PPIC-type PPIASE domain HOO69_09185 PF00216 Bacterial DNA-binding protein HOO69_09190 PF02190 ATP-dependent protease La (LON) substrate-binding domain HOO69_09190 PF05362 Lon protease (S16) C-terminal proteolytic domain HOO69_09190 PF00004 ATPase family associated with various cellular activities (AAA) HOO69_09195 PF10431 C-terminal, D2-small domain, of ClpB protein HOO69_09195 PF07724 AAA domain (Cdc48 subfamily) HOO69_09195 PF06689 ClpX C4-type zinc finger HOO69_09200 PF00574 Clp protease HOO69_09205 PF05698 Bacterial trigger factor protein (TF) C-terminus HOO69_09205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HOO69_09205 PF05697 Bacterial trigger factor protein (TF) HOO69_09210 PF02743 Cache domain HOO69_09210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_09210 PF00512 His Kinase A (phospho-acceptor) domain HOO69_09215 PF00158 Sigma-54 interaction domain HOO69_09215 PF00072 Response regulator receiver domain HOO69_09215 PF02954 Bacterial regulatory protein, Fis family HOO69_09220 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HOO69_09225 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HOO69_09230 PF03480 Bacterial extracellular solute-binding protein, family 7 HOO69_09235 PF03459 TOBE domain HOO69_09235 PF17912 MalK OB fold domain HOO69_09235 PF00005 ABC transporter HOO69_09240 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_09245 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_09250 PF01547 Bacterial extracellular solute-binding protein HOO69_09255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_09255 PF00672 HAMP domain HOO69_09255 PF00512 His Kinase A (phospho-acceptor) domain HOO69_09260 PF00486 Transcriptional regulatory protein, C terminal HOO69_09260 PF00072 Response regulator receiver domain HOO69_09270 PF00672 HAMP domain HOO69_09270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_09270 PF00512 His Kinase A (phospho-acceptor) domain HOO69_09270 PF00072 Response regulator receiver domain HOO69_09270 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HOO69_09270 PF01627 Hpt domain HOO69_09275 PF12729 Four helix bundle sensory module for signal transduction HOO69_09275 PF00672 HAMP domain HOO69_09275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_09295 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HOO69_09295 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HOO69_09300 PF01773 Na+ dependent nucleoside transporter N-terminus HOO69_09300 PF07670 Nucleoside recognition HOO69_09300 PF07662 Na+ dependent nucleoside transporter C-terminus HOO69_09305 PF03466 LysR substrate binding domain HOO69_09305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_09310 PF13406 Transglycosylase SLT domain HOO69_09315 PF05166 YcgL domain HOO69_09320 PF05209 Septum formation inhibitor MinC, N-terminal domain HOO69_09320 PF03775 Septum formation inhibitor MinC, C-terminal domain HOO69_09325 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HOO69_09330 PF03776 Septum formation topological specificity factor MinE HOO69_09335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_09335 PF00672 HAMP domain HOO69_09340 PF00171 Aldehyde dehydrogenase family HOO69_09340 PF00465 Iron-containing alcohol dehydrogenase HOO69_09345 PF01914 MarC family integral membrane protein HOO69_09350 PF00027 Cyclic nucleotide-binding domain HOO69_09350 PF00520 Ion transport protein HOO69_09360 PF01118 Semialdehyde dehydrogenase, NAD binding domain HOO69_09360 PF02774 Semialdehyde dehydrogenase, dimerisation domain HOO69_09365 PF03553 Na+/H+ antiporter family HOO69_09380 PF04245 37-kD nucleoid-associated bacterial protein HOO69_09385 PF07208 Protein of unknown function (DUF1414) HOO69_09390 PF11893 Domain of unknown function (DUF3413) HOO69_09390 PF00884 Sulfatase HOO69_09405 PF00293 NUDIX domain HOO69_09410 PF00850 Histone deacetylase domain HOO69_09415 PF02264 LamB porin HOO69_09420 PF00356 Bacterial regulatory proteins, lacI family HOO69_09430 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_09435 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_09440 PF00232 Glycosyl hydrolase family 1 HOO69_09445 PF08402 TOBE domain HOO69_09445 PF00005 ABC transporter HOO69_09450 PF00356 Bacterial regulatory proteins, lacI family HOO69_09455 PF00106 short chain dehydrogenase HOO69_09475 PF01131 DNA topoisomerase HOO69_09475 PF01751 Toprim domain HOO69_09480 PF00462 Glutaredoxin HOO69_09485 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HOO69_09485 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HOO69_09500 PF01451 Low molecular weight phosphotyrosine protein phosphatase HOO69_09510 PF00672 HAMP domain HOO69_09510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_09510 PF12729 Four helix bundle sensory module for signal transduction HOO69_09515 PF12557 Cob(I)alamin adenosyltransferase N terminal HOO69_09515 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HOO69_09530 PF00485 Phosphoribulokinase / Uridine kinase family HOO69_09535 PF10609 NUBPL iron-transfer P-loop NTPase HOO69_09540 PF01588 Putative tRNA binding domain HOO69_09540 PF09334 tRNA synthetases class I (M) HOO69_09555 PF01048 Phosphorylase superfamily HOO69_09560 PF00403 Heavy-metal-associated domain HOO69_09565 PF01554 MatE HOO69_09570 PF01743 Poly A polymerase head domain HOO69_09570 PF00571 CBS domain HOO69_09580 PF00990 Diguanylate cyclase, GGDEF domain HOO69_09585 PF02391 MoaE protein HOO69_09590 PF02597 ThiS family HOO69_09595 PF01967 MoaC family HOO69_09600 PF00994 Probable molybdopterin binding domain HOO69_09610 PF01933 Uncharacterised protein family UPF0052 HOO69_09615 PF01627 Hpt domain HOO69_09620 PF00158 Sigma-54 interaction domain HOO69_09620 PF00072 Response regulator receiver domain HOO69_09620 PF02954 Bacterial regulatory protein, Fis family HOO69_09625 PF12344 Ultra-violet resistance protein B HOO69_09625 PF17757 UvrB interaction domain HOO69_09625 PF02151 UvrB/uvrC motif HOO69_09625 PF04851 Type III restriction enzyme, res subunit HOO69_09625 PF00271 Helicase conserved C-terminal domain HOO69_09635 PF07702 UTRA domain HOO69_09635 PF00392 Bacterial regulatory proteins, gntR family HOO69_09640 PF01547 Bacterial extracellular solute-binding protein HOO69_09660 PF00005 ABC transporter HOO69_09660 PF08402 TOBE domain HOO69_09670 PF02508 Rnf-Nqr subunit, membrane protein HOO69_09675 PF04060 Putative Fe-S cluster HOO69_09680 PF13375 RnfC Barrel sandwich hybrid domain HOO69_09680 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HOO69_09680 PF12838 4Fe-4S dicluster domain HOO69_09680 PF10531 SLBB domain HOO69_09690 PF04205 FMN-binding domain HOO69_09695 PF02508 Rnf-Nqr subunit, membrane protein HOO69_09700 PF00730 HhH-GPD superfamily base excision DNA repair protein HOO69_09700 PF00633 Helix-hairpin-helix motif HOO69_09700 PF10576 Iron-sulfur binding domain of endonuclease III HOO69_09705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HOO69_09710 PF10952 Protein of unknown function (DUF2753) HOO69_09715 PF18393 MotY N-terminal domain HOO69_09715 PF00691 OmpA family HOO69_09720 PF00929 Exonuclease HOO69_09725 PF03553 Na+/H+ antiporter family HOO69_09725 PF13726 Na+-H+ antiporter family HOO69_09735 PF00701 Dihydrodipicolinate synthetase family HOO69_09740 PF01842 ACT domain HOO69_09745 PF00578 AhpC/TSA family HOO69_09750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_09750 PF00672 HAMP domain HOO69_09750 PF02743 Cache domain HOO69_09755 PF01594 AI-2E family transporter HOO69_09765 PF01435 Peptidase family M48 HOO69_09765 PF13181 Tetratricopeptide repeat HOO69_09770 PF03960 ArsC family HOO69_09775 PF03358 NADPH-dependent FMN reductase HOO69_09790 PF00860 Permease family HOO69_09795 PF04073 Aminoacyl-tRNA editing domain HOO69_09800 PF00149 Calcineurin-like phosphoesterase HOO69_09800 PF02872 5'-nucleotidase, C-terminal domain HOO69_09805 PF00793 DAHP synthetase I family HOO69_09810 PF13369 Transglutaminase-like superfamily HOO69_09820 PF13847 Methyltransferase domain HOO69_09820 PF17827 PrmC N-terminal domain HOO69_09825 PF00472 RF-1 domain HOO69_09825 PF03462 PCRF domain HOO69_09835 PF03550 Outer membrane lipoprotein LolB HOO69_09845 PF14572 Phosphoribosyl synthetase-associated domain HOO69_09845 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HOO69_09850 PF01195 Peptidyl-tRNA hydrolase HOO69_09855 PF01926 50S ribosome-binding GTPase HOO69_09855 PF06071 Protein of unknown function (DUF933) HOO69_09960 PF00669 Bacterial flagellin N-terminal helical region HOO69_09960 PF00700 Bacterial flagellin C-terminal helical region HOO69_09960 PF07196 Flagellin hook IN motif HOO69_09965 PF00669 Bacterial flagellin N-terminal helical region HOO69_09965 PF07196 Flagellin hook IN motif HOO69_09965 PF00700 Bacterial flagellin C-terminal helical region HOO69_09970 PF00700 Bacterial flagellin C-terminal helical region HOO69_09970 PF00669 Bacterial flagellin N-terminal helical region HOO69_09975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HOO69_09975 PF07196 Flagellin hook IN motif HOO69_09980 PF10135 Rod binding protein HOO69_09980 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HOO69_09990 PF02107 Flagellar L-ring protein HOO69_09995 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HOO69_09995 PF00460 Flagella basal body rod protein HOO69_10000 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HOO69_10000 PF00460 Flagella basal body rod protein HOO69_10005 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HOO69_10005 PF07559 Flagellar basal body protein FlaE HOO69_10005 PF00460 Flagella basal body rod protein HOO69_10010 PF03963 Flagellar hook capping protein - N-terminal region HOO69_10010 PF13861 FlgD Tudor-like domain HOO69_10010 PF13860 FlgD Ig-like domain HOO69_10015 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HOO69_10015 PF00460 Flagella basal body rod protein HOO69_10020 PF00460 Flagella basal body rod protein HOO69_10025 PF01739 CheR methyltransferase, SAM binding domain HOO69_10025 PF03705 CheR methyltransferase, all-alpha domain HOO69_10030 PF00072 Response regulator receiver domain HOO69_10030 PF01584 CheW-like domain HOO69_10040 PF04316 Anti-sigma-28 factor, FlgM HOO69_10075 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HOO69_10110 PF00589 Phage integrase family HOO69_10120 PF00691 OmpA family HOO69_10120 PF01389 OmpA-like transmembrane domain HOO69_10125 PF13488 Glycine zipper HOO69_10125 PF00691 OmpA family HOO69_10130 PF00749 tRNA synthetases class I (E and Q), catalytic domain HOO69_10140 PF13609 Gram-negative porin HOO69_10145 PF00403 Heavy-metal-associated domain HOO69_10170 PF00762 Ferrochelatase HOO69_10175 PF05191 Adenylate kinase, active site lid HOO69_10185 PF00486 Transcriptional regulatory protein, C terminal HOO69_10190 PF17323 Trans-membrane regulatory protein ToxS HOO69_10205 PF12850 Calcineurin-like phosphoesterase superfamily domain HOO69_10220 PF07556 Protein of unknown function (DUF1538) HOO69_10225 PF07556 Protein of unknown function (DUF1538) HOO69_10230 PF01370 NAD dependent epimerase/dehydratase family HOO69_10230 PF08338 Domain of unknown function (DUF1731) HOO69_10235 PF00106 short chain dehydrogenase HOO69_10240 PF00085 Thioredoxin HOO69_10245 PF01145 SPFH domain / Band 7 family HOO69_10245 PF16200 C-terminal region of band_7 HOO69_10265 PF13609 Gram-negative porin HOO69_10275 PF04354 ZipA, C-terminal FtsZ-binding domain HOO69_10285 PF00291 Pyridoxal-phosphate dependent enzyme HOO69_10290 PF00381 PTS HPr component phosphorylation site HOO69_10295 PF05524 PEP-utilising enzyme, N-terminal HOO69_10295 PF00391 PEP-utilising enzyme, mobile domain HOO69_10295 PF02896 PEP-utilising enzyme, TIM barrel domain HOO69_10300 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HOO69_10305 PF01494 FAD binding domain HOO69_10310 PF04055 Radical SAM superfamily HOO69_10310 PF00919 Uncharacterized protein family UPF0004 HOO69_10310 PF01938 TRAM domain HOO69_10315 PF02562 PhoH-like protein HOO69_10320 PF02130 Uncharacterized protein family UPF0054 HOO69_10325 PF00571 CBS domain HOO69_10325 PF03471 Transporter associated domain HOO69_10330 PF00795 Carbon-nitrogen hydrolase HOO69_10335 PF07295 Zinc-ribbon containing domain HOO69_10340 PF00133 tRNA synthetases class I (I, L, M and V) HOO69_10340 PF13603 Leucyl-tRNA synthetase, Domain 2 HOO69_10340 PF08264 Anticodon-binding domain of tRNA HOO69_10345 PF04390 Lipopolysaccharide-assembly HOO69_10350 PF14840 Processivity clamp loader gamma complex DNA pol III C-term HOO69_10350 PF06144 DNA polymerase III, delta subunit HOO69_10360 PF02590 Predicted SPOUT methyltransferase HOO69_10370 PF01098 Cell cycle protein HOO69_10375 PF03330 Lytic transglycolase HOO69_10375 PF05036 Sporulation related domain HOO69_10380 PF07943 Penicillin-binding protein 5, C-terminal domain HOO69_10380 PF00768 D-alanyl-D-alanine carboxypeptidase HOO69_10385 PF04359 Protein of unknown function (DUF493) HOO69_10390 PF03099 Biotin/lipoate A/B protein ligase family HOO69_10395 PF04055 Radical SAM superfamily HOO69_10395 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HOO69_10405 PF00464 Serine hydroxymethyltransferase HOO69_10415 PF00873 AcrB/AcrD/AcrF family HOO69_10445 PF16657 Maltogenic Amylase, C-terminal domain HOO69_10445 PF00128 Alpha amylase, catalytic domain HOO69_10450 PF02378 Phosphotransferase system, EIIC HOO69_10450 PF00367 phosphotransferase system, EIIB HOO69_10455 PF00356 Bacterial regulatory proteins, lacI family HOO69_10470 PF09383 NIL domain HOO69_10470 PF00005 ABC transporter HOO69_10475 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_10480 PF03180 NLPA lipoprotein HOO69_10490 PF03806 AbgT putative transporter family HOO69_10495 PF00444 Ribosomal protein L36 HOO69_10505 PF18389 TrmO C-terminal domain HOO69_10505 PF01980 tRNA-methyltransferase O HOO69_10510 PF03129 Anticodon binding domain HOO69_10510 PF04073 Aminoacyl-tRNA editing domain HOO69_10510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HOO69_10515 PF13230 Glutamine amidotransferases class-II HOO69_10520 PF13580 SIS domain HOO69_10525 PF09317 Domain of unknown function (DUF1974) HOO69_10525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HOO69_10525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HOO69_10535 PF00929 Exonuclease HOO69_10540 PF00075 RNase H HOO69_10545 PF08241 Methyltransferase domain HOO69_10550 PF16123 Hydroxyacylglutathione hydrolase C-terminus HOO69_10550 PF00753 Metallo-beta-lactamase superfamily HOO69_10555 PF01464 Transglycosylase SLT domain HOO69_10555 PF01476 LysM domain HOO69_10565 PF03372 Endonuclease/Exonuclease/phosphatase family HOO69_10570 PF00543 Nitrogen regulatory protein P-II HOO69_10575 PF00034 Cytochrome c HOO69_10580 PF11734 TilS substrate C-terminal domain HOO69_10580 PF01171 PP-loop family HOO69_10580 PF09179 TilS substrate binding domain HOO69_10585 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HOO69_10590 PF01336 OB-fold nucleic acid binding domain HOO69_10590 PF02811 PHP domain HOO69_10590 PF14579 Helix-hairpin-helix motif HOO69_10590 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HOO69_10590 PF07733 Bacterial DNA polymerase III alpha NTPase domain HOO69_10595 PF01351 Ribonuclease HII HOO69_10600 PF02684 Lipid-A-disaccharide synthetase HOO69_10610 PF07977 FabA-like domain HOO69_10615 PF00132 Bacterial transferase hexapeptide (six repeats) HOO69_10615 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HOO69_10620 PF03938 Outer membrane protein (OmpH-like) HOO69_10625 PF01103 Surface antigen HOO69_10625 PF07244 Surface antigen variable number repeat HOO69_10630 PF02163 Peptidase family M50 HOO69_10630 PF17820 PDZ domain HOO69_10635 PF13288 DXP reductoisomerase C-terminal domain HOO69_10635 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HOO69_10635 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HOO69_10645 PF01255 Putative undecaprenyl diphosphate synthase HOO69_10650 PF01765 Ribosome recycling factor HOO69_10655 PF00696 Amino acid kinase family HOO69_10660 PF00889 Elongation factor TS HOO69_10665 PF00318 Ribosomal protein S2 HOO69_10670 PF00557 Metallopeptidase family M24 HOO69_10675 PF01966 HD domain HOO69_10675 PF08335 GlnD PII-uridylyltransferase HOO69_10675 PF01842 ACT domain HOO69_10675 PF01909 Nucleotidyltransferase domain HOO69_10680 PF11944 Protein of unknown function (DUF3461) HOO69_10685 PF04608 Phosphatidylglycerophosphatase A HOO69_10690 PF00586 AIR synthase related protein, N-terminal domain HOO69_10690 PF02769 AIR synthase related protein, C-terminal domain HOO69_10700 PF00885 6,7-dimethyl-8-ribityllumazine synthase HOO69_10705 PF00925 GTP cyclohydrolase II HOO69_10705 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HOO69_10710 PF00677 Lumazine binding domain HOO69_10715 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HOO69_10715 PF01872 RibD C-terminal domain HOO69_10720 PF03477 ATP cone domain HOO69_10725 PF00171 Aldehyde dehydrogenase family HOO69_10730 PF01472 PUA domain HOO69_10730 PF00696 Amino acid kinase family HOO69_10735 PF07417 Sigma factor-binding transcriptional regulator Crl HOO69_10745 PF00156 Phosphoribosyl transferase domain HOO69_10750 PF00860 Permease family HOO69_10755 PF01546 Peptidase family M20/M25/M40 HOO69_10755 PF07687 Peptidase dimerisation domain HOO69_10760 PF08443 RimK-like ATP-grasp domain HOO69_10760 PF18030 RimK PreATP-grasp domain HOO69_10765 PF08443 RimK-like ATP-grasp domain HOO69_10765 PF18030 RimK PreATP-grasp domain HOO69_10775 PF00209 Sodium:neurotransmitter symporter family HOO69_10795 PF09382 RQC domain HOO69_10795 PF16124 RecQ zinc-binding HOO69_10795 PF00570 HRDC domain HOO69_10795 PF00270 DEAD/DEAH box helicase HOO69_10795 PF00271 Helicase conserved C-terminal domain HOO69_10800 PF00817 impB/mucB/samB family HOO69_10800 PF11798 IMS family HHH motif HOO69_10800 PF11799 impB/mucB/samB family C-terminal domain HOO69_10805 PF00072 Response regulator receiver domain HOO69_10805 PF00990 Diguanylate cyclase, GGDEF domain HOO69_10810 PF04400 (Na+)-NQR maturation NqrM HOO69_10815 PF02424 ApbE family HOO69_10820 PF00970 Oxidoreductase FAD-binding domain HOO69_10820 PF00111 2Fe-2S iron-sulfur cluster binding domain HOO69_10820 PF00175 Oxidoreductase NAD-binding domain HOO69_10825 PF02508 Rnf-Nqr subunit, membrane protein HOO69_10830 PF02508 Rnf-Nqr subunit, membrane protein HOO69_10835 PF04205 FMN-binding domain HOO69_10840 PF03116 NQR2, RnfD, RnfE family HOO69_10845 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) HOO69_10845 PF11973 NQRA C-terminal domain HOO69_10850 PF01722 BolA-like protein HOO69_10855 PF05175 Methyltransferase small domain HOO69_10865 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HOO69_10870 PF07690 Major Facilitator Superfamily HOO69_10880 PF04545 Sigma-70, region 4 HOO69_10880 PF04542 Sigma-70 region 2 HOO69_10895 PF02558 Ketopantoate reductase PanE/ApbA HOO69_10895 PF08546 Ketopantoate reductase PanE/ApbA C terminal HOO69_10900 PF01965 DJ-1/PfpI family HOO69_10910 PF18073 Rubredoxin metal binding domain HOO69_10920 PF18429 Domain of unknown function (DUF5609) HOO69_10930 PF01048 Phosphorylase superfamily HOO69_10935 PF01676 Metalloenzyme superfamily HOO69_10940 PF00591 Glycosyl transferase family, a/b domain HOO69_10940 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HOO69_10940 PF02885 Glycosyl transferase family, helical bundle domain HOO69_10945 PF01791 DeoC/LacD family aldolase HOO69_10955 PF07670 Nucleoside recognition HOO69_10955 PF07662 Na+ dependent nucleoside transporter C-terminus HOO69_10955 PF01773 Na+ dependent nucleoside transporter N-terminus HOO69_10960 PF01026 TatD related DNase HOO69_10970 PF03883 Peroxide stress protein YaaA HOO69_10975 PF01235 Sodium:alanine symporter family HOO69_10990 PF03167 Uracil DNA glycosylase superfamily HOO69_10995 PF01261 Xylose isomerase-like TIM barrel HOO69_11000 PF01228 Glycine radical HOO69_11010 PF01925 Sulfite exporter TauE/SafE HOO69_11015 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HOO69_11015 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HOO69_11015 PF02142 MGS-like domain HOO69_11020 PF00117 Glutamine amidotransferase class-I HOO69_11020 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HOO69_11025 PF01113 Dihydrodipicolinate reductase, N-terminus HOO69_11025 PF05173 Dihydrodipicolinate reductase, C-terminus HOO69_11030 PF00293 NUDIX domain HOO69_11035 PF02810 SEC-C motif HOO69_11035 PF07516 SecA Wing and Scaffold domain HOO69_11035 PF07517 SecA DEAD-like domain HOO69_11035 PF01043 SecA preprotein cross-linking domain HOO69_11050 PF00091 Tubulin/FtsZ family, GTPase domain HOO69_11050 PF12327 FtsZ family, C-terminal domain HOO69_11055 PF02491 SHS2 domain inserted in FTSA HOO69_11060 PF08478 POTRA domain, FtsQ-type HOO69_11060 PF03799 Cell division protein FtsQ HOO69_11065 PF01225 Mur ligase family, catalytic domain HOO69_11065 PF02875 Mur ligase family, glutamate ligase domain HOO69_11065 PF08245 Mur ligase middle domain HOO69_11070 PF03033 Glycosyltransferase family 28 N-terminal domain HOO69_11070 PF04101 Glycosyltransferase family 28 C-terminal domain HOO69_11075 PF01098 Cell cycle protein HOO69_11080 PF08245 Mur ligase middle domain HOO69_11080 PF02875 Mur ligase family, glutamate ligase domain HOO69_11085 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HOO69_11085 PF00953 Glycosyl transferase family 4 HOO69_11090 PF08245 Mur ligase middle domain HOO69_11090 PF01225 Mur ligase family, catalytic domain HOO69_11090 PF02875 Mur ligase family, glutamate ligase domain HOO69_11095 PF02875 Mur ligase family, glutamate ligase domain HOO69_11095 PF01225 Mur ligase family, catalytic domain HOO69_11095 PF08245 Mur ligase middle domain HOO69_11100 PF03717 Penicillin-binding Protein dimerisation domain HOO69_11100 PF00905 Penicillin binding protein transpeptidase domain HOO69_11105 PF04999 Cell division protein FtsL HOO69_11110 PF01795 MraW methylase family HOO69_11120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HOO69_11125 PF04348 LppC putative lipoprotein HOO69_11130 PF02021 Uncharacterised protein family UPF0102 HOO69_11135 PF13580 SIS domain HOO69_11140 PF04972 BON domain HOO69_11145 PF04386 Stringent starvation protein B HOO69_11150 PF00043 Glutathione S-transferase, C-terminal domain HOO69_11150 PF02798 Glutathione S-transferase, N-terminal domain HOO69_11155 PF02167 Cytochrome C1 family HOO69_11160 PF00032 Cytochrome b(C-terminal)/b6/petD HOO69_11160 PF00033 Cytochrome b/b6/petB HOO69_11165 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal HOO69_11165 PF00355 Rieske [2Fe-2S] domain HOO69_11170 PF00380 Ribosomal protein S9/S16 HOO69_11175 PF00572 Ribosomal protein L13 HOO69_11180 PF03969 AFG1-like ATPase HOO69_11185 PF06295 Protein of unknown function (DUF1043) HOO69_11190 PF00595 PDZ domain HOO69_11190 PF13180 PDZ domain HOO69_11195 PF13180 PDZ domain HOO69_11200 PF00521 DNA gyrase/topoisomerase IV, subunit A HOO69_11200 PF03989 DNA gyrase C-terminal domain, beta-propeller HOO69_11205 PF00986 DNA gyrase B subunit, carboxyl terminus HOO69_11205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_11205 PF01751 Toprim domain HOO69_11205 PF00204 DNA gyrase B HOO69_11210 PF05728 Uncharacterised protein family (UPF0227) HOO69_11215 PF00149 Calcineurin-like phosphoesterase HOO69_11220 PF06853 Protein of unknown function (DUF1249) HOO69_11225 PF00293 NUDIX domain HOO69_11230 PF02321 Outer membrane efflux protein HOO69_11240 PF00072 Response regulator receiver domain HOO69_11240 PF00989 PAS fold HOO69_11240 PF01627 Hpt domain HOO69_11240 PF18415 Histidine kinase receptor ArcB trans-membrane domain HOO69_11240 PF00512 His Kinase A (phospho-acceptor) domain HOO69_11240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_11245 PF00563 EAL domain HOO69_11245 PF01590 GAF domain HOO69_11245 PF00360 Phytochrome region HOO69_11245 PF00990 Diguanylate cyclase, GGDEF domain HOO69_11250 PF04055 Radical SAM superfamily HOO69_11250 PF16199 Radical_SAM C-terminal domain HOO69_11255 PF00310 Glutamine amidotransferases class-II HOO69_11255 PF01493 GXGXG motif HOO69_11255 PF01645 Conserved region in glutamate synthase HOO69_11255 PF04898 Glutamate synthase central domain HOO69_11260 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HOO69_11260 PF07992 Pyridine nucleotide-disulphide oxidoreductase HOO69_11265 PF00310 Glutamine amidotransferases class-II HOO69_11265 PF01493 GXGXG motif HOO69_11265 PF04898 Glutamate synthase central domain HOO69_11265 PF01645 Conserved region in glutamate synthase HOO69_11270 PF07992 Pyridine nucleotide-disulphide oxidoreductase HOO69_11270 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HOO69_11280 PF09157 Pseudouridine synthase II TruB, C-terminal HOO69_11280 PF16198 tRNA pseudouridylate synthase B C-terminal domain HOO69_11280 PF01509 TruB family pseudouridylate synthase (N terminal domain) HOO69_11285 PF02033 Ribosome-binding factor A HOO69_11290 PF11987 Translation-initiation factor 2 HOO69_11290 PF04760 Translation initiation factor IF-2, N-terminal region HOO69_11290 PF00009 Elongation factor Tu GTP binding domain HOO69_11290 PF08364 Bacterial translation initiation factor IF-2 associated region HOO69_11295 PF00575 S1 RNA binding domain HOO69_11295 PF08529 NusA N-terminal domain HOO69_11295 PF13184 NusA-like KH domain HOO69_11300 PF17384 RimP C-terminal SH3 domain HOO69_11300 PF02576 RimP N-terminal domain HOO69_11315 PF03840 Preprotein translocase SecG subunit HOO69_11320 PF13508 Acetyltransferase (GNAT) domain HOO69_11325 PF02036 SCP-2 sterol transfer family HOO69_11330 PF03707 Bacterial signalling protein N terminal repeat HOO69_11330 PF00990 Diguanylate cyclase, GGDEF domain HOO69_11330 PF00563 EAL domain HOO69_11335 PF01136 Peptidase family U32 HOO69_11340 PF01136 Peptidase family U32 HOO69_11355 PF13181 Tetratricopeptide repeat HOO69_11355 PF07719 Tetratricopeptide repeat HOO69_11360 PF03725 3' exoribonuclease family, domain 2 HOO69_11360 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HOO69_11360 PF00575 S1 RNA binding domain HOO69_11360 PF01138 3' exoribonuclease family, domain 1 HOO69_11360 PF00013 KH domain HOO69_11370 PF01048 Phosphorylase superfamily HOO69_11380 PF01497 Periplasmic binding protein HOO69_11385 PF03458 UPF0126 domain HOO69_11390 PF14821 Threonine synthase N terminus HOO69_11390 PF00291 Pyridoxal-phosphate dependent enzyme HOO69_11400 PF00696 Amino acid kinase family HOO69_11400 PF01842 ACT domain HOO69_11400 PF03447 Homoserine dehydrogenase, NAD binding domain HOO69_11400 PF13840 ACT domain HOO69_11400 PF00742 Homoserine dehydrogenase HOO69_11410 PF03737 Aldolase/RraA HOO69_11420 PF00486 Transcriptional regulatory protein, C terminal HOO69_11420 PF00072 Response regulator receiver domain HOO69_11430 PF03710 Glutamate-ammonia ligase adenylyltransferase HOO69_11430 PF08335 GlnD PII-uridylyltransferase HOO69_11435 PF00672 HAMP domain HOO69_11435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_11440 PF00520 Ion transport protein HOO69_11440 PF00027 Cyclic nucleotide-binding domain HOO69_11445 PF01928 CYTH domain HOO69_11450 PF01865 Protein of unknown function DUF47 HOO69_11460 PF08239 Bacterial SH3 domain HOO69_11475 PF12627 Probable RNA and SrmB- binding site of polymerase A HOO69_11475 PF01743 Poly A polymerase head domain HOO69_11475 PF01966 HD domain HOO69_11480 PF00113 Enolase, C-terminal TIM barrel domain HOO69_11480 PF03952 Enolase, N-terminal domain HOO69_11485 PF06418 CTP synthase N-terminus HOO69_11485 PF00117 Glutamine amidotransferase class-I HOO69_11490 PF03819 MazG nucleotide pyrophosphohydrolase domain HOO69_11495 PF02824 TGS domain HOO69_11495 PF13291 ACT domain HOO69_11495 PF04607 Region found in RelA / SpoT proteins HOO69_11505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_11505 PF01627 Hpt domain HOO69_11505 PF00512 His Kinase A (phospho-acceptor) domain HOO69_11505 PF00072 Response regulator receiver domain HOO69_11505 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HOO69_11505 PF00672 HAMP domain HOO69_11510 PF00563 EAL domain HOO69_11510 PF03707 Bacterial signalling protein N terminal repeat HOO69_11510 PF00990 Diguanylate cyclase, GGDEF domain HOO69_11525 PF01648 4'-phosphopantetheinyl transferase superfamily HOO69_11530 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HOO69_11535 PF11967 Recombination protein O N terminal HOO69_11535 PF02565 Recombination protein O C terminal HOO69_11540 PF01926 50S ribosome-binding GTPase HOO69_11540 PF07650 KH domain HOO69_11545 PF14622 Ribonuclease-III-like HOO69_11545 PF00035 Double-stranded RNA binding motif HOO69_11550 PF10502 Signal peptidase, peptidase S26 HOO69_11555 PF06421 GTP-binding protein LepA C-terminus HOO69_11555 PF03144 Elongation factor Tu domain 2 HOO69_11555 PF00679 Elongation factor G C-terminus HOO69_11555 PF00009 Elongation factor Tu GTP binding domain HOO69_11565 PF03888 MucB/RseB N-terminal domain HOO69_11565 PF17188 MucB/RseB C-terminal domain HOO69_11570 PF03872 Anti sigma-E protein RseA, N-terminal domain HOO69_11570 PF03873 Anti sigma-E protein RseA, C-terminal domain HOO69_11575 PF08281 Sigma-70, region 4 HOO69_11575 PF04542 Sigma-70 region 2 HOO69_11580 PF00890 FAD binding domain HOO69_11580 PF02910 Fumarate reductase flavoprotein C-term HOO69_11590 PF03937 Flavinator of succinate dehydrogenase HOO69_11610 PF01494 FAD binding domain HOO69_11615 PF01494 FAD binding domain HOO69_11625 PF05164 Cell division protein ZapA HOO69_11635 PF01812 5-formyltetrahydrofolate cyclo-ligase family HOO69_11640 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HOO69_11645 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HOO69_11645 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HOO69_11645 PF01842 ACT domain HOO69_11650 PF10369 Small subunit of acetolactate synthase HOO69_11655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HOO69_11655 PF00205 Thiamine pyrophosphate enzyme, central domain HOO69_11655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HOO69_11660 PF00501 AMP-binding enzyme HOO69_11665 PF03466 LysR substrate binding domain HOO69_11665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_11675 PF01569 PAP2 superfamily HOO69_11680 PF08502 LeuA allosteric (dimerisation) domain HOO69_11680 PF00682 HMGL-like HOO69_11685 PF00180 Isocitrate/isopropylmalate dehydrogenase HOO69_11690 PF00330 Aconitase family (aconitate hydratase) HOO69_11695 PF00694 Aconitase C-terminal domain HOO69_11750 PF00072 Response regulator receiver domain HOO69_11770 PF02664 S-Ribosylhomocysteinase (LuxS) HOO69_11780 PF04262 Glutamate-cysteine ligase HOO69_11785 PF00675 Insulinase (Peptidase family M16) HOO69_11785 PF05193 Peptidase M16 inactive domain HOO69_11790 PF09335 SNARE associated Golgi protein HOO69_11800 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit HOO69_11805 PF00682 HMGL-like HOO69_11805 PF00364 Biotin-requiring enzyme HOO69_11805 PF02436 Conserved carboxylase domain HOO69_11810 PF04277 Oxaloacetate decarboxylase, gamma chain HOO69_11855 PF02599 Global regulator protein family HOO69_11860 PF13840 ACT domain HOO69_11860 PF00696 Amino acid kinase family HOO69_11860 PF01842 ACT domain HOO69_11865 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HOO69_11865 PF01411 tRNA synthetases class II (A) HOO69_11865 PF02272 DHHA1 domain HOO69_11870 PF02631 RecX family HOO69_11875 PF00154 recA bacterial DNA recombination protein HOO69_11880 PF02464 Competence-damaged protein HOO69_11885 PF05192 MutS domain III HOO69_11885 PF05188 MutS domain II HOO69_11885 PF01624 MutS domain I HOO69_11885 PF05190 MutS family domain IV HOO69_11885 PF00488 MutS domain V HOO69_11890 PF03739 Lipopolysaccharide export system permease LptF/LptG HOO69_11895 PF03739 Lipopolysaccharide export system permease LptF/LptG HOO69_11900 PF00883 Cytosol aminopeptidase family, catalytic domain HOO69_11900 PF02789 Cytosol aminopeptidase family, N-terminal domain HOO69_11905 PF04364 DNA polymerase III chi subunit, HolC HOO69_11910 PF08264 Anticodon-binding domain of tRNA HOO69_11910 PF00133 tRNA synthetases class I (I, L, M and V) HOO69_11910 PF10458 Valyl tRNA synthetase tRNA binding arm HOO69_11920 PF05987 Bacterial protein of unknown function (DUF898) HOO69_11930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HOO69_11930 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HOO69_11935 PF00849 RNA pseudouridylate synthase HOO69_11940 PF00271 Helicase conserved C-terminal domain HOO69_11940 PF12137 RNA polymerase recycling family C-terminal HOO69_11940 PF00176 SNF2 family N-terminal domain HOO69_11940 PF18339 RapA N-terminal Tudor like domain 1 HOO69_11940 PF18337 RapA N-terminal Tudor like domain HOO69_11945 PF02562 PhoH-like protein HOO69_11945 PF13638 PIN domain HOO69_11950 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HOO69_11950 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HOO69_11955 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HOO69_11955 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HOO69_11960 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain HOO69_11960 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain HOO69_11965 PF01042 Endoribonuclease L-PSP HOO69_11975 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HOO69_11975 PF00056 lactate/malate dehydrogenase, NAD binding domain HOO69_11980 PF01316 Arginine repressor, DNA binding domain HOO69_11980 PF02863 Arginine repressor, C-terminal domain HOO69_11985 PF16868 NMT1-like family HOO69_11995 PF00582 Universal stress protein family HOO69_12010 PF06877 Regulator of ribonuclease activity B HOO69_12020 PF01523 Putative modulator of DNA gyrase HOO69_12025 PF00795 Carbon-nitrogen hydrolase HOO69_12030 PF13116 Protein of unknown function HOO69_12030 PF13502 AsmA-like C-terminal region HOO69_12035 PF00575 S1 RNA binding domain HOO69_12035 PF10150 Ribonuclease E/G family HOO69_12040 PF02545 Maf-like protein HOO69_12045 PF04093 rod shape-determining protein MreD HOO69_12050 PF04085 rod shape-determining protein MreC HOO69_12085 PF07963 Prokaryotic N-terminal methylation motif HOO69_12085 PF00114 Pilin (bacterial filament) HOO69_12090 PF07963 Prokaryotic N-terminal methylation motif HOO69_12090 PF00114 Pilin (bacterial filament) HOO69_12100 PF00482 Type II secretion system (T2SS), protein F HOO69_12105 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HOO69_12105 PF00437 Type II/IV secretion system protein HOO69_12120 PF00263 Bacterial type II and III secretion system protein HOO69_12120 PF03958 Bacterial type II/III secretion system short domain HOO69_12140 PF00563 EAL domain HOO69_12140 PF00990 Diguanylate cyclase, GGDEF domain HOO69_12140 PF17157 Gammaproteobacterial periplasmic sensor domain HOO69_12145 PF00436 Single-strand binding protein family HOO69_12150 PF00196 Bacterial regulatory proteins, luxR family HOO69_12150 PF00072 Response regulator receiver domain HOO69_12155 PF00483 Nucleotidyl transferase HOO69_12160 PF17760 UvrA interaction domain HOO69_12160 PF00005 ABC transporter HOO69_12160 PF17755 UvrA DNA-binding domain HOO69_12170 PF00266 Aminotransferase class-V HOO69_12175 PF00696 Amino acid kinase family HOO69_12175 PF01842 ACT domain HOO69_12185 PF04751 Protein of unknown function (DUF615) HOO69_12190 PF00005 ABC transporter HOO69_12195 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_12205 PF02441 Flavoprotein HOO69_12210 PF08245 Mur ligase middle domain HOO69_12210 PF02875 Mur ligase family, glutamate ligase domain HOO69_12210 PF01225 Mur ligase family, catalytic domain HOO69_12215 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HOO69_12225 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like HOO69_12230 PF04357 TamB, inner membrane protein subunit of TAM complex HOO69_12235 PF01103 Surface antigen HOO69_12235 PF07244 Surface antigen variable number repeat HOO69_12235 PF17243 POTRA domain TamA domain 1 HOO69_12240 PF01625 Peptide methionine sulfoxide reductase HOO69_12245 PF00072 Response regulator receiver domain HOO69_12250 PF00909 Ammonium Transporter Family HOO69_12260 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) HOO69_12275 PF00005 ABC transporter HOO69_12295 PF00342 Phosphoglucose isomerase HOO69_12300 PF01894 Uncharacterised protein family UPF0047 HOO69_12315 PF01042 Endoribonuclease L-PSP HOO69_12320 PF03313 Serine dehydratase alpha chain HOO69_12325 PF13309 HTH domain HOO69_12325 PF08348 YheO-like PAS domain HOO69_12335 PF00842 Alanine racemase, C-terminal domain HOO69_12335 PF01168 Alanine racemase, N-terminal domain HOO69_12340 PF03796 DnaB-like helicase C terminal domain HOO69_12340 PF00772 DnaB-like helicase N terminal domain HOO69_12350 PF03948 Ribosomal protein L9, C-terminal domain HOO69_12350 PF01281 Ribosomal protein L9, N-terminal domain HOO69_12355 PF01084 Ribosomal protein S18 HOO69_12360 PF00436 Single-strand binding protein family HOO69_12365 PF01250 Ribosomal protein S6 HOO69_12370 PF00884 Sulfatase HOO69_12370 PF08019 Phosphoethanolamine transferase EptA/EptB HOO69_12375 PF01219 Prokaryotic diacylglycerol kinase HOO69_12380 PF00210 Ferritin-like domain HOO69_12385 PF04324 BFD-like [2Fe-2S] binding domain HOO69_12395 PF00679 Elongation factor G C-terminus HOO69_12395 PF03764 Elongation factor G, domain IV HOO69_12395 PF00009 Elongation factor Tu GTP binding domain HOO69_12395 PF03144 Elongation factor Tu domain 2 HOO69_12395 PF14492 Elongation Factor G, domain II HOO69_12400 PF00177 Ribosomal protein S7p/S5e HOO69_12405 PF00164 Ribosomal protein S12/S23 HOO69_12410 PF04077 DsrH like protein HOO69_12415 PF02635 DsrE/DsrF-like family HOO69_12420 PF02635 DsrE/DsrF-like family HOO69_12425 PF08348 YheO-like PAS domain HOO69_12425 PF13309 HTH domain HOO69_12430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HOO69_12430 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HOO69_12440 PF04102 SlyX HOO69_12450 PF01145 SPFH domain / Band 7 family HOO69_12455 PF01145 SPFH domain / Band 7 family HOO69_12455 PF12221 Bacterial membrane protein N terminal HOO69_12460 PF13167 GTP-binding GTPase N-terminal HOO69_12460 PF16360 GTP-binding GTPase Middle Region HOO69_12460 PF01926 50S ribosome-binding GTPase HOO69_12465 PF17209 Hfq protein HOO69_12475 PF01119 DNA mismatch repair protein, C-terminal domain HOO69_12475 PF08676 MutL C terminal dimerisation domain HOO69_12480 PF01520 N-acetylmuramoyl-L-alanine amidase HOO69_12485 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HOO69_12490 PF08331 Domain of unknown function (DUF1730) HOO69_12550 PF00929 Exonuclease HOO69_12555 PF03193 RsgA GTPase HOO69_12560 PF02666 Phosphatidylserine decarboxylase HOO69_12565 PF03600 Citrate transporter HOO69_12565 PF02080 TrkA-C domain HOO69_12570 PF02743 Cache domain HOO69_12570 PF00672 HAMP domain HOO69_12570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_12580 PF01676 Metalloenzyme superfamily HOO69_12580 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HOO69_12585 PF01551 Peptidase family M23 HOO69_12595 PF00440 Bacterial regulatory proteins, tetR family HOO69_12595 PF08361 MAATS-type transcriptional repressor, C-terminal region HOO69_12600 PF01208 Uroporphyrinogen decarboxylase (URO-D) HOO69_12605 PF00293 NUDIX domain HOO69_12605 PF09297 NADH pyrophosphatase zinc ribbon domain HOO69_12610 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ HOO69_12615 PF00623 RNA polymerase Rpb1, domain 2 HOO69_12615 PF04983 RNA polymerase Rpb1, domain 3 HOO69_12615 PF04998 RNA polymerase Rpb1, domain 5 HOO69_12615 PF05000 RNA polymerase Rpb1, domain 4 HOO69_12615 PF04997 RNA polymerase Rpb1, domain 1 HOO69_12620 PF10385 RNA polymerase beta subunit external 1 domain HOO69_12620 PF04561 RNA polymerase Rpb2, domain 2 HOO69_12620 PF04560 RNA polymerase Rpb2, domain 7 HOO69_12620 PF04565 RNA polymerase Rpb2, domain 3 HOO69_12620 PF04563 RNA polymerase beta subunit HOO69_12620 PF00562 RNA polymerase Rpb2, domain 6 HOO69_12625 PF16320 Ribosomal protein L7/L12 dimerisation domain HOO69_12625 PF00542 Ribosomal protein L7/L12 C-terminal domain HOO69_12630 PF00466 Ribosomal protein L10 HOO69_12635 PF00687 Ribosomal protein L1p/L10e family HOO69_12640 PF03946 Ribosomal protein L11, N-terminal domain HOO69_12640 PF00298 Ribosomal protein L11, RNA binding domain HOO69_12645 PF02357 Transcription termination factor nusG HOO69_12645 PF00467 KOW motif HOO69_12650 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HOO69_12655 PF03144 Elongation factor Tu domain 2 HOO69_12655 PF03143 Elongation factor Tu C-terminal domain HOO69_12655 PF00009 Elongation factor Tu GTP binding domain HOO69_12680 PF00485 Phosphoribulokinase / Uridine kinase family HOO69_12695 PF00121 Triosephosphate isomerase HOO69_12700 PF01554 MatE HOO69_12705 PF03737 Aldolase/RraA HOO69_12710 PF01040 UbiA prenyltransferase family HOO69_12715 PF08207 Elongation factor P (EF-P) KOW-like domain HOO69_12715 PF01132 Elongation factor P (EF-P) OB domain HOO69_12715 PF09285 Elongation factor P, C-terminal HOO69_12720 PF04055 Radical SAM superfamily HOO69_12725 PF00114 Pilin (bacterial filament) HOO69_12725 PF07963 Prokaryotic N-terminal methylation motif HOO69_12730 PF02308 MgtC family HOO69_12735 PF03605 Anaerobic c4-dicarboxylate membrane transporter HOO69_12740 PF00365 Phosphofructokinase HOO69_12745 PF01545 Cation efflux family HOO69_12745 PF16916 Dimerisation domain of Zinc Transporter HOO69_12750 PF07813 LTXXQ motif family protein HOO69_12755 PF00486 Transcriptional regulatory protein, C terminal HOO69_12755 PF00072 Response regulator receiver domain HOO69_12760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_12760 PF16527 Two-component sensor protein CpxA, periplasmic domain HOO69_12760 PF00672 HAMP domain HOO69_12760 PF00512 His Kinase A (phospho-acceptor) domain HOO69_12765 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HOO69_12765 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HOO69_12770 PF00588 SpoU rRNA Methylase family HOO69_12775 PF00579 tRNA synthetases class I (W and Y) HOO69_12780 PF13419 Haloacid dehalogenase-like hydrolase HOO69_12785 PF00834 Ribulose-phosphate 3 epimerase family HOO69_12790 PF02086 D12 class N6 adenine-specific DNA methyltransferase HOO69_12805 PF01202 Shikimate kinase HOO69_12810 PF07660 Secretin and TonB N terminus short domain HOO69_12810 PF11741 AMIN domain HOO69_12810 PF00263 Bacterial type II and III secretion system protein HOO69_12810 PF03958 Bacterial type II/III secretion system short domain HOO69_12835 PF00905 Penicillin binding protein transpeptidase domain HOO69_12835 PF17092 Penicillin-binding protein OB-like domain HOO69_12835 PF00912 Transglycosylase HOO69_12840 PF03466 LysR substrate binding domain HOO69_12840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_12845 PF08534 Redoxin HOO69_12845 PF00462 Glutaredoxin HOO69_12850 PF01042 Endoribonuclease L-PSP HOO69_12860 PF14698 Argininosuccinate lyase C-terminal HOO69_12860 PF00583 Acetyltransferase (GNAT) family HOO69_12860 PF00206 Lyase HOO69_12865 PF00764 Arginosuccinate synthase HOO69_12870 PF00696 Amino acid kinase family HOO69_12875 PF01118 Semialdehyde dehydrogenase, NAD binding domain HOO69_12875 PF02774 Semialdehyde dehydrogenase, dimerisation domain HOO69_12885 PF00311 Phosphoenolpyruvate carboxylase HOO69_12890 PF10400 Virulence activator alpha C-term HOO69_12890 PF03551 Transcriptional regulator PadR-like family HOO69_12895 PF06426 Serine acetyltransferase, N-terminal HOO69_12895 PF00132 Bacterial transferase hexapeptide (six repeats) HOO69_12900 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HOO69_12900 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HOO69_12905 PF02556 Preprotein translocase subunit SecB HOO69_12910 PF00581 Rhodanese-like domain HOO69_12915 PF00152 tRNA synthetases class II (D, K and N) HOO69_12920 PF00890 FAD binding domain HOO69_12920 PF02910 Fumarate reductase flavoprotein C-term HOO69_12925 PF13183 4Fe-4S dicluster domain HOO69_12925 PF13085 2Fe-2S iron-sulfur cluster binding domain HOO69_12930 PF02300 Fumarate reductase subunit C HOO69_12935 PF02313 Fumarate reductase subunit D HOO69_12940 PF02028 BCCT, betaine/carnitine/choline family transporter HOO69_12950 PF07724 AAA domain (Cdc48 subfamily) HOO69_12950 PF00004 ATPase family associated with various cellular activities (AAA) HOO69_12960 PF05036 Sporulation related domain HOO69_12965 PF00356 Bacterial regulatory proteins, lacI family HOO69_12970 PF17764 3′ DNA-binding domain (3′BD) HOO69_12970 PF00271 Helicase conserved C-terminal domain HOO69_12970 PF18074 Primosomal protein N C-terminal domain HOO69_12970 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HOO69_12970 PF00270 DEAD/DEAH box helicase HOO69_12980 PF00390 Malic enzyme, N-terminal domain HOO69_12980 PF03949 Malic enzyme, NAD binding domain HOO69_12990 PF01053 Cys/Met metabolism PLP-dependent enzyme HOO69_12995 PF03447 Homoserine dehydrogenase, NAD binding domain HOO69_12995 PF00696 Amino acid kinase family HOO69_12995 PF00742 Homoserine dehydrogenase HOO69_13010 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HOO69_13070 PF01177 Asp/Glu/Hydantoin racemase HOO69_13080 PF00593 TonB dependent receptor HOO69_13080 PF07715 TonB-dependent Receptor Plug Domain HOO69_13085 PF05958 tRNA (Uracil-5-)-methyltransferase HOO69_13090 PF07226 Protein of unknown function (DUF1422) HOO69_13095 PF00440 Bacterial regulatory proteins, tetR family HOO69_13100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HOO69_13100 PF07992 Pyridine nucleotide-disulphide oxidoreductase HOO69_13105 PF00756 Putative esterase HOO69_13110 PF08240 Alcohol dehydrogenase GroES-like domain HOO69_13110 PF00107 Zinc-binding dehydrogenase HOO69_13115 PF01554 MatE HOO69_13125 PF00717 Peptidase S24-like HOO69_13125 PF01726 LexA DNA binding domain HOO69_13130 PF01219 Prokaryotic diacylglycerol kinase HOO69_13135 PF01553 Acyltransferase HOO69_13140 PF01040 UbiA prenyltransferase family HOO69_13145 PF04345 Chorismate lyase HOO69_13150 PF03748 Flagellar basal body-associated protein FliL HOO69_13155 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease HOO69_13155 PF01694 Rhomboid family HOO69_13160 PF00581 Rhodanese-like domain HOO69_13165 PF00140 Sigma-70 factor, region 1.2 HOO69_13165 PF04542 Sigma-70 region 2 HOO69_13165 PF04545 Sigma-70, region 4 HOO69_13170 PF18075 FtsX extracellular domain HOO69_13175 PF00005 ABC transporter HOO69_13180 PF02881 SRP54-type protein, helical bundle domain HOO69_13180 PF00448 SRP54-type protein, GTPase domain HOO69_13195 PF01914 MarC family integral membrane protein HOO69_13235 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HOO69_13235 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HOO69_13240 PF01022 Bacterial regulatory protein, arsR family HOO69_13245 PF08668 HDOD domain HOO69_13245 PF00563 EAL domain HOO69_13250 PF01810 LysE type translocator HOO69_13255 PF12146 Serine aminopeptidase, S33 HOO69_13280 PF00990 Diguanylate cyclase, GGDEF domain HOO69_13280 PF10442 FIST C domain HOO69_13280 PF08495 FIST N domain HOO69_13280 PF00563 EAL domain HOO69_13285 PF13419 Haloacid dehalogenase-like hydrolase HOO69_13290 PF00589 Phage integrase family HOO69_13290 PF02899 Phage integrase, N-terminal SAM-like domain HOO69_13300 PF01678 Diaminopimelate epimerase HOO69_13305 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HOO69_13305 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HOO69_13315 PF01491 Frataxin-like domain HOO69_13320 PF01295 Adenylate cyclase, class-I HOO69_13320 PF12633 Adenylate cyclase NT domain HOO69_13325 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HOO69_13325 PF03900 Porphobilinogen deaminase, C-terminal domain HOO69_13330 PF02602 Uroporphyrinogen-III synthase HemD HOO69_13335 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase HOO69_13340 PF07219 HemY protein N-terminus HOO69_13380 PF00175 Oxidoreductase NAD-binding domain HOO69_13385 PF00970 Oxidoreductase FAD-binding domain HOO69_13385 PF00111 2Fe-2S iron-sulfur cluster binding domain HOO69_13385 PF00175 Oxidoreductase NAD-binding domain HOO69_13390 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HOO69_13400 PF07498 Rho termination factor, N-terminal domain HOO69_13400 PF07497 Rho termination factor, RNA-binding domain HOO69_13400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HOO69_13405 PF00085 Thioredoxin HOO69_13410 PF00270 DEAD/DEAH box helicase HOO69_13410 PF00271 Helicase conserved C-terminal domain HOO69_13415 PF02541 Ppx/GppA phosphatase family HOO69_13420 PF02592 Putative vitamin uptake transporter HOO69_13430 PF00570 HRDC domain HOO69_13430 PF09382 RQC domain HOO69_13430 PF00270 DEAD/DEAH box helicase HOO69_13430 PF00271 Helicase conserved C-terminal domain HOO69_13430 PF16124 RecQ zinc-binding HOO69_13435 PF00892 EamA-like transporter family HOO69_13445 PF01810 LysE type translocator HOO69_13455 PF08534 Redoxin HOO69_13460 PF13361 UvrD-like helicase C-terminal domain HOO69_13460 PF00580 UvrD/REP helicase N-terminal domain HOO69_13470 PF05114 Protein of unknown function (DUF692) HOO69_13490 PF01432 Peptidase family M3 HOO69_13495 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HOO69_13505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HOO69_13505 PF07992 Pyridine nucleotide-disulphide oxidoreductase HOO69_13510 PF00072 Response regulator receiver domain HOO69_13525 PF12911 N-terminal TM domain of oligopeptide transport permease C HOO69_13525 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_13535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HOO69_13540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HOO69_13540 PF00005 ABC transporter HOO69_13570 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HOO69_13575 PF00580 UvrD/REP helicase N-terminal domain HOO69_13575 PF13361 UvrD-like helicase C-terminal domain HOO69_13580 PF00440 Bacterial regulatory proteins, tetR family HOO69_13585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HOO69_13590 PF00873 AcrB/AcrD/AcrF family HOO69_13595 PF04380 Membrane fusogenic activity HOO69_13600 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HOO69_13600 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HOO69_13605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_13605 PF03466 LysR substrate binding domain HOO69_13610 PF04055 Radical SAM superfamily HOO69_13610 PF06969 HemN C-terminal domain HOO69_13620 PF04220 Der GTPase activator (YihI) HOO69_13630 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HOO69_13635 PF01926 50S ribosome-binding GTPase HOO69_13640 PF00476 DNA polymerase family A HOO69_13640 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HOO69_13640 PF01612 3'-5' exonuclease HOO69_13640 PF01367 5'-3' exonuclease, C-terminal SAM fold HOO69_13650 PF00490 Delta-aminolevulinic acid dehydratase HOO69_13655 PF01026 TatD related DNase HOO69_13660 PF00902 Sec-independent protein translocase protein (TatC) HOO69_13665 PF02416 mttA/Hcf106 family HOO69_13675 PF03109 ABC1 family HOO69_13680 PF02036 SCP-2 sterol transfer family HOO69_13685 PF01209 ubiE/COQ5 methyltransferase family HOO69_13690 PF02646 RmuC family HOO69_13700 PF08668 HDOD domain HOO69_13705 PF12852 Cupin HOO69_13705 PF12833 Helix-turn-helix domain HOO69_13720 PF10625 Universal stress protein B (UspB) HOO69_13725 PF00210 Ferritin-like domain HOO69_13730 PF00582 Universal stress protein family HOO69_13735 PF00892 EamA-like transporter family HOO69_13745 PF04445 Putative SAM-dependent methyltransferase HOO69_13750 PF00563 EAL domain HOO69_13750 PF08448 PAS fold HOO69_13750 PF00990 Diguanylate cyclase, GGDEF domain HOO69_13755 PF01037 Lrp/AsnC ligand binding domain HOO69_13755 PF13404 AsnC-type helix-turn-helix domain HOO69_13765 PF07690 Major Facilitator Superfamily HOO69_13770 PF03466 LysR substrate binding domain HOO69_13770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_13775 PF00557 Metallopeptidase family M24 HOO69_13775 PF01321 Creatinase/Prolidase N-terminal domain HOO69_13775 PF01321 Creatinase/Prolidase N-terminal domain HOO69_13775 PF00557 Metallopeptidase family M24 HOO69_13780 PF06968 Biotin and Thiamin Synthesis associated domain HOO69_13780 PF04055 Radical SAM superfamily HOO69_13785 PF05690 Thiazole biosynthesis protein ThiG HOO69_13790 PF02597 ThiS family HOO69_13795 PF00899 ThiF family HOO69_13800 PF02581 Thiamine monophosphate synthase HOO69_13805 PF13667 ThiC-associated domain HOO69_13805 PF01964 Radical SAM ThiC family HOO69_13810 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HOO69_13815 PF07732 Multicopper oxidase HOO69_13815 PF07731 Multicopper oxidase HOO69_13815 PF00394 Multicopper oxidase HOO69_13865 PF12724 Flavodoxin domain HOO69_13870 PF02386 Cation transport protein HOO69_13875 PF01205 Uncharacterized protein family UPF0029 HOO69_13875 PF09186 Domain of unknown function (DUF1949) HOO69_13880 PF00378 Enoyl-CoA hydratase/isomerase HOO69_13880 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HOO69_13880 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HOO69_13885 PF02803 Thiolase, C-terminal domain HOO69_13885 PF00108 Thiolase, N-terminal domain HOO69_13890 PF03466 LysR substrate binding domain HOO69_13890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_13895 PF07690 Major Facilitator Superfamily HOO69_13900 PF00497 Bacterial extracellular solute-binding proteins, family 3 HOO69_13905 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_13910 PF12804 MobA-like NTP transferase domain HOO69_13910 PF00132 Bacterial transferase hexapeptide (six repeats) HOO69_13915 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HOO69_13915 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HOO69_13920 PF02874 ATP synthase alpha/beta family, beta-barrel domain HOO69_13920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HOO69_13925 PF00231 ATP synthase HOO69_13930 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HOO69_13930 PF02874 ATP synthase alpha/beta family, beta-barrel domain HOO69_13930 PF00306 ATP synthase alpha/beta chain, C terminal domain HOO69_13935 PF00213 ATP synthase delta (OSCP) subunit HOO69_13940 PF00430 ATP synthase B/B' CF(0) HOO69_13945 PF00137 ATP synthase subunit C HOO69_13950 PF00119 ATP synthase A chain HOO69_13955 PF03899 ATP synthase I chain HOO69_13960 PF17762 HTH domain found in ParB protein HOO69_13960 PF02195 ParB-like nuclease domain HOO69_13965 PF13614 AAA domain HOO69_13975 PF01134 Glucose inhibited division protein A HOO69_13975 PF13932 GidA associated domain HOO69_13980 PF00258 Flavodoxin HOO69_13985 PF12631 MnmE helical domain HOO69_13985 PF01926 50S ribosome-binding GTPase HOO69_13985 PF10396 GTP-binding protein TrmE N-terminus HOO69_13990 PF14849 YidC periplasmic domain HOO69_13990 PF02096 60Kd inner membrane protein HOO69_13995 PF01809 Putative membrane protein insertion efficiency factor HOO69_14000 PF00825 Ribonuclease P HOO69_14010 PF00005 ABC transporter HOO69_14015 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_14020 PF00497 Bacterial extracellular solute-binding proteins, family 3 HOO69_14025 PF00308 Bacterial dnaA protein HOO69_14025 PF08299 Bacterial dnaA protein helix-turn-helix HOO69_14025 PF11638 DnaA N-terminal domain HOO69_14030 PF00712 DNA polymerase III beta subunit, N-terminal domain HOO69_14030 PF02767 DNA polymerase III beta subunit, central domain HOO69_14030 PF02768 DNA polymerase III beta subunit, C-terminal domain HOO69_14035 PF02463 RecF/RecN/SMC N terminal domain HOO69_14040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_14040 PF00204 DNA gyrase B HOO69_14040 PF00986 DNA gyrase B subunit, carboxyl terminus HOO69_14040 PF18053 DNA gyrase B subunit insert domain HOO69_14040 PF01751 Toprim domain HOO69_14045 PF00011 Hsp20/alpha crystallin family HOO69_14055 PF00155 Aminotransferase class I and II HOO69_14060 PF02092 Glycyl-tRNA synthetase beta subunit HOO69_14060 PF05746 DALR anticodon binding domain HOO69_14070 PF01169 Uncharacterized protein family UPF0016 HOO69_14080 PF01206 Sulfurtransferase TusA HOO69_14090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_14090 PF03466 LysR substrate binding domain HOO69_14095 PF08240 Alcohol dehydrogenase GroES-like domain HOO69_14095 PF00107 Zinc-binding dehydrogenase HOO69_14100 PF00291 Pyridoxal-phosphate dependent enzyme HOO69_14100 PF00585 C-terminal regulatory domain of Threonine dehydratase HOO69_14105 PF00920 Dehydratase family HOO69_14110 PF01063 Amino-transferase class IV HOO69_14120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HOO69_14120 PF00205 Thiamine pyrophosphate enzyme, central domain HOO69_14120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HOO69_14135 PF02481 DNA recombination-mediator protein A HOO69_14135 PF17782 DprA winged helix domain HOO69_14180 PF01553 Acyltransferase HOO69_14185 PF01323 DSBA-like thioredoxin domain HOO69_14190 PF01636 Phosphotransferase enzyme family HOO69_14195 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HOO69_14195 PF12801 4Fe-4S binding domain HOO69_14195 PF13746 4Fe-4S dicluster domain HOO69_14200 PF06288 Protein of unknown function (DUF1040) HOO69_14210 PF07070 SpoOM protein HOO69_14215 PF03006 Haemolysin-III related HOO69_14220 PF02386 Cation transport protein HOO69_14225 PF02080 TrkA-C domain HOO69_14225 PF02254 TrkA-N domain HOO69_14230 PF01029 NusB family HOO69_14230 PF01189 16S rRNA methyltransferase RsmB/F HOO69_14235 PF02911 Formyl transferase, C-terminal domain HOO69_14235 PF00551 Formyl transferase HOO69_14240 PF01327 Polypeptide deformylase HOO69_14245 PF01476 LysM domain HOO69_14250 PF17782 DprA winged helix domain HOO69_14250 PF02481 DNA recombination-mediator protein A HOO69_14255 PF04361 Protein of unknown function (DUF494) HOO69_14260 PF01396 Topoisomerase DNA binding C4 zinc finger HOO69_14265 PF02222 ATP-grasp domain HOO69_14265 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HOO69_14270 PF00731 AIR carboxylase HOO69_14275 PF01300 Telomere recombination HOO69_14280 PF01218 Coproporphyrinogen III oxidase HOO69_14285 PF01488 Shikimate / quinate 5-dehydrogenase HOO69_14285 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HOO69_14285 PF08501 Shikimate dehydrogenase substrate binding domain HOO69_14290 PF07369 Protein of unknown function (DUF1488) HOO69_14295 PF00132 Bacterial transferase hexapeptide (six repeats) HOO69_14340 PF00990 Diguanylate cyclase, GGDEF domain HOO69_14340 PF03707 Bacterial signalling protein N terminal repeat HOO69_14340 PF00563 EAL domain HOO69_14340 PF13188 PAS domain HOO69_14345 PF00158 Sigma-54 interaction domain HOO69_14345 PF00072 Response regulator receiver domain HOO69_14345 PF02954 Bacterial regulatory protein, Fis family HOO69_14350 PF00989 PAS fold HOO69_14350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_14350 PF00512 His Kinase A (phospho-acceptor) domain HOO69_14360 PF00120 Glutamine synthetase, catalytic domain HOO69_14360 PF03951 Glutamine synthetase, beta-Grasp domain HOO69_14390 PF02580 D-Tyr-tRNA(Tyr) deacylase HOO69_14395 PF00583 Acetyltransferase (GNAT) family HOO69_14395 PF09500 Putative thioesterase (yiiD_Cterm) HOO69_14405 PF01293 Phosphoenolpyruvate carboxykinase HOO69_14410 PF01430 Hsp33 protein HOO69_14415 PF01479 S4 domain HOO69_14420 PF11356 Type II secretion system protein C HOO69_14425 PF00263 Bacterial type II and III secretion system protein HOO69_14425 PF03958 Bacterial type II/III secretion system short domain HOO69_14430 PF00437 Type II/IV secretion system protein HOO69_14435 PF00482 Type II secretion system (T2SS), protein F HOO69_14440 PF07963 Prokaryotic N-terminal methylation motif HOO69_14440 PF08334 Type II secretion system (T2SS), protein G HOO69_14445 PF12019 Type II transport protein GspH HOO69_14450 PF07963 Prokaryotic N-terminal methylation motif HOO69_14450 PF02501 Type II secretion system (T2SS), protein I HOO69_14455 PF07963 Prokaryotic N-terminal methylation motif HOO69_14455 PF11612 Type II secretion system (T2SS), protein J HOO69_14460 PF03934 Type II secretion system (T2SS), protein K HOO69_14465 PF05134 Type II secretion system (T2SS), protein L HOO69_14465 PF12693 GspL periplasmic domain HOO69_14470 PF04612 Type II secretion system (T2SS), protein M HOO69_14475 PF01203 Type II secretion system (T2SS), protein N HOO69_14480 PF00672 HAMP domain HOO69_14480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_14480 PF00512 His Kinase A (phospho-acceptor) domain HOO69_14485 PF00072 Response regulator receiver domain HOO69_14485 PF00486 Transcriptional regulatory protein, C terminal HOO69_14490 PF03449 Transcription elongation factor, N-terminal HOO69_14490 PF01272 Transcription elongation factor, GreA/GreB, C-term HOO69_14500 PF17674 HHH domain HOO69_14500 PF16921 Tex protein YqgF-like domain HOO69_14500 PF09371 Tex-like protein N-terminal domain HOO69_14500 PF00575 S1 RNA binding domain HOO69_14510 PF00561 alpha/beta hydrolase fold HOO69_14515 PF00156 Phosphoribosyl transferase domain HOO69_14520 PF01521 Iron-sulphur cluster biosynthesis HOO69_14520 PF01106 NifU-like domain HOO69_14525 PF00293 NUDIX domain HOO69_14530 PF00459 Inositol monophosphatase family HOO69_14535 PF17191 RecG wedge domain HOO69_14535 PF00271 Helicase conserved C-terminal domain HOO69_14535 PF00270 DEAD/DEAH box helicase HOO69_14540 PF12105 SpoU, rRNA methylase, C-terminal HOO69_14540 PF00588 SpoU rRNA Methylase family HOO69_14545 PF13291 ACT domain HOO69_14545 PF04607 Region found in RelA / SpoT proteins HOO69_14545 PF02824 TGS domain HOO69_14550 PF01192 RNA polymerase Rpb6 HOO69_14555 PF00625 Guanylate kinase HOO69_14560 PF00860 Permease family HOO69_14575 PF03755 YicC-like family, N-terminal region HOO69_14575 PF08340 Domain of unknown function (DUF1732) HOO69_14580 PF01138 3' exoribonuclease family, domain 1 HOO69_14580 PF03725 3' exoribonuclease family, domain 2 HOO69_14590 PF03279 Bacterial lipid A biosynthesis acyltransferase HOO69_14595 PF03279 Bacterial lipid A biosynthesis acyltransferase HOO69_14600 PF00440 Bacterial regulatory proteins, tetR family HOO69_14605 PF04127 DNA / pantothenate metabolism flavoprotein HOO69_14605 PF02441 Flavoprotein HOO69_14610 PF04002 RadC-like JAB domain HOO69_14620 PF00471 Ribosomal protein L33 HOO69_14630 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HOO69_14630 PF06827 Zinc finger found in FPG and IleRS HOO69_14630 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HOO69_14635 PF01467 Cytidylyltransferase-like HOO69_14640 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HOO69_14645 PF00535 Glycosyl transferase family 2 HOO69_14650 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HOO69_14670 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HOO69_14675 PF04321 RmlD substrate binding domain HOO69_14680 PF00483 Nucleotidyl transferase HOO69_14685 PF16363 GDP-mannose 4,6 dehydratase HOO69_14690 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HOO69_14695 PF04488 Glycosyltransferase sugar-binding region containing DXD motif HOO69_14700 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HOO69_14715 PF01370 NAD dependent epimerase/dehydratase family HOO69_14720 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HOO69_14720 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HOO69_14725 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HOO69_14725 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HOO69_14725 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HOO69_14730 PF00132 Bacterial transferase hexapeptide (six repeats) HOO69_14735 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HOO69_14745 PF02719 Polysaccharide biosynthesis protein HOO69_14750 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HOO69_14755 PF02348 Cytidylyltransferase HOO69_14765 PF08666 SAF domain HOO69_14765 PF03102 NeuB family HOO69_14770 PF06508 Queuosine biosynthesis protein QueC HOO69_14775 PF00117 Glutamine amidotransferase class-I HOO69_14780 PF00977 Histidine biosynthesis protein HOO69_14815 PF00117 Glutamine amidotransferase class-I HOO69_14820 PF00977 Histidine biosynthesis protein HOO69_14830 PF01757 Acyltransferase family HOO69_14835 PF00534 Glycosyl transferases group 1 HOO69_14840 PF01370 NAD dependent epimerase/dehydratase family HOO69_14845 PF02397 Bacterial sugar transferase HOO69_14850 PF02719 Polysaccharide biosynthesis protein HOO69_14855 PF13091 PLD-like domain HOO69_14860 PF02237 Biotin protein ligase C terminal domain HOO69_14860 PF03099 Biotin/lipoate A/B protein ligase family HOO69_14860 PF08279 HTH domain HOO69_14865 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HOO69_14865 PF01565 FAD binding domain HOO69_14885 PF02706 Chain length determinant protein HOO69_14890 PF00166 Chaperonin 10 Kd subunit HOO69_14895 PF00118 TCP-1/cpn60 chaperonin family HOO69_14900 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HOO69_14900 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HOO69_14900 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HOO69_14905 PF03167 Uracil DNA glycosylase superfamily HOO69_14910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HOO69_14915 PF04222 Protein of unknown function (DUF416) HOO69_14920 PF01595 Cyclin M transmembrane N-terminal domain HOO69_14920 PF00571 CBS domain HOO69_14925 PF00216 Bacterial DNA-binding protein HOO69_14935 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HOO69_14935 PF02843 Phosphoribosylglycinamide synthetase, C domain HOO69_14935 PF02844 Phosphoribosylglycinamide synthetase, N domain HOO69_14945 PF13411 MerR HTH family regulatory protein HOO69_14950 PF05230 MASE2 domain HOO69_14950 PF00990 Diguanylate cyclase, GGDEF domain HOO69_14955 PF02954 Bacterial regulatory protein, Fis family HOO69_14960 PF01207 Dihydrouridine synthase (Dus) HOO69_14970 PF00289 Biotin carboxylase, N-terminal domain HOO69_14970 PF02785 Biotin carboxylase C-terminal domain HOO69_14970 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HOO69_14975 PF00364 Biotin-requiring enzyme HOO69_14980 PF01220 Dehydroquinase class II HOO69_14985 PF00501 AMP-binding enzyme HOO69_14985 PF13193 AMP-binding enzyme C-terminal domain HOO69_14985 PF16177 Acetyl-coenzyme A synthetase N-terminus HOO69_15000 PF12832 MFS_1 like family HOO69_15005 PF09308 LuxQ, periplasmic HOO69_15005 PF00512 His Kinase A (phospho-acceptor) domain HOO69_15005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_15005 PF00072 Response regulator receiver domain HOO69_15015 PF00474 Sodium:solute symporter family HOO69_15025 PF01914 MarC family integral membrane protein HOO69_15030 PF00072 Response regulator receiver domain HOO69_15030 PF00196 Bacterial regulatory proteins, luxR family HOO69_15035 PF11412 Disulphide bond corrector protein DsbC HOO69_15035 PF02683 Cytochrome C biogenesis protein transmembrane region HOO69_15040 PF02863 Arginine repressor, C-terminal domain HOO69_15040 PF01316 Arginine repressor, DNA binding domain HOO69_15045 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain HOO69_15045 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain HOO69_15050 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HOO69_15050 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HOO69_15055 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HOO69_15055 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HOO69_15060 PF00696 Amino acid kinase family HOO69_15070 PF03606 C4-dicarboxylate anaerobic carrier HOO69_15075 PF03605 Anaerobic c4-dicarboxylate membrane transporter HOO69_15080 PF00206 Lyase HOO69_15080 PF10415 Fumarase C C-terminus HOO69_15095 PF00117 Glutamine amidotransferase class-I HOO69_15100 PF00202 Aminotransferase class-III HOO69_15105 PF04958 Arginine N-succinyltransferase beta subunit HOO69_15110 PF00171 Aldehyde dehydrogenase family HOO69_15120 PF13545 Crp-like helix-turn-helix domain HOO69_15120 PF00027 Cyclic nucleotide-binding domain HOO69_15125 PF00485 Phosphoribulokinase / Uridine kinase family HOO69_15130 PF06794 Uncharacterised protein family (UPF0270) HOO69_15135 PF00561 alpha/beta hydrolase fold HOO69_15145 PF12848 ABC transporter HOO69_15145 PF00005 ABC transporter HOO69_15150 PF02525 Flavodoxin-like fold HOO69_15155 PF02254 TrkA-N domain HOO69_15155 PF00999 Sodium/hydrogen exchanger family HOO69_15160 PF09526 Probable metal-binding protein (DUF2387) HOO69_15165 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HOO69_15170 PF01112 Asparaginase HOO69_15175 PF00709 Adenylosuccinate synthetase HOO69_15180 PF08238 Sel1 repeat HOO69_15185 PF01979 Amidohydrolase family HOO69_15190 PF00575 S1 RNA binding domain HOO69_15190 PF00773 RNB domain HOO69_15190 PF08206 Ribonuclease B OB domain HOO69_15190 PF08461 Ribonuclease R winged-helix domain HOO69_15190 PF17876 Cold shock domain HOO69_15195 PF08032 RNA 2'-O ribose methyltransferase substrate binding HOO69_15195 PF00588 SpoU rRNA Methylase family HOO69_15200 PF00338 Ribosomal protein S10p/S20e HOO69_15205 PF00297 Ribosomal protein L3 HOO69_15210 PF00573 Ribosomal protein L4/L1 family HOO69_15215 PF00276 Ribosomal protein L23 HOO69_15220 PF03947 Ribosomal Proteins L2, C-terminal domain HOO69_15220 PF00181 Ribosomal Proteins L2, RNA binding domain HOO69_15225 PF00203 Ribosomal protein S19 HOO69_15230 PF00237 Ribosomal protein L22p/L17e HOO69_15235 PF07650 KH domain HOO69_15235 PF00189 Ribosomal protein S3, C-terminal domain HOO69_15240 PF00252 Ribosomal protein L16p/L10e HOO69_15245 PF00831 Ribosomal L29 protein HOO69_15250 PF00366 Ribosomal protein S17 HOO69_15255 PF00238 Ribosomal protein L14p/L23e HOO69_15260 PF00467 KOW motif HOO69_15260 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HOO69_15265 PF00673 ribosomal L5P family C-terminus HOO69_15265 PF00281 Ribosomal protein L5 HOO69_15270 PF00253 Ribosomal protein S14p/S29e HOO69_15275 PF00410 Ribosomal protein S8 HOO69_15280 PF00347 Ribosomal protein L6 HOO69_15285 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HOO69_15290 PF00333 Ribosomal protein S5, N-terminal domain HOO69_15290 PF03719 Ribosomal protein S5, C-terminal domain HOO69_15295 PF00327 Ribosomal protein L30p/L7e HOO69_15305 PF00344 SecY translocase HOO69_15310 PF00444 Ribosomal protein L36 HOO69_15315 PF00416 Ribosomal protein S13/S18 HOO69_15320 PF00411 Ribosomal protein S11 HOO69_15325 PF00163 Ribosomal protein S4/S9 N-terminal domain HOO69_15325 PF01479 S4 domain HOO69_15335 PF01196 Ribosomal protein L17 HOO69_15345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HOO69_15345 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HOO69_15360 PF13673 Acetyltransferase (GNAT) domain HOO69_15365 PF00027 Cyclic nucleotide-binding domain HOO69_15365 PF13545 Crp-like helix-turn-helix domain HOO69_15370 PF02872 5'-nucleotidase, C-terminal domain HOO69_15370 PF00149 Calcineurin-like phosphoesterase HOO69_15375 PF10414 Sirohaem synthase dimerisation region HOO69_15375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HOO69_15375 PF14824 Sirohaem biosynthesis protein central HOO69_15380 PF01507 Phosphoadenosine phosphosulfate reductase family HOO69_15385 PF00009 Elongation factor Tu GTP binding domain HOO69_15390 PF02080 TrkA-C domain HOO69_15390 PF03600 Citrate transporter HOO69_15405 PF01475 Ferric uptake regulator family HOO69_15410 PF00072 Response regulator receiver domain HOO69_15410 PF01627 Hpt domain HOO69_15410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_15410 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HOO69_15410 PF00512 His Kinase A (phospho-acceptor) domain HOO69_15410 PF00672 HAMP domain HOO69_15415 PF00072 Response regulator receiver domain HOO69_15420 PF01207 Dihydrouridine synthase (Dus) HOO69_15440 PF00175 Oxidoreductase NAD-binding domain HOO69_15440 PF00258 Flavodoxin HOO69_15440 PF00667 FAD binding domain HOO69_15445 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HOO69_15445 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HOO69_15505 PF14684 Tricorn protease C1 domain HOO69_15505 PF14685 Tricorn protease PDZ domain HOO69_15505 PF07676 WD40-like Beta Propeller Repeat HOO69_15505 PF03572 Peptidase family S41 HOO69_15530 PF18340 DNA relaxase TraI 2B/2B-like domain HOO69_15530 PF18272 single-stranded DNA binding TraI N-terminal subdomain HOO69_15530 PF07057 DNA helicase TraI HOO69_15530 PF08751 TrwC relaxase HOO69_15540 PF03707 Bacterial signalling protein N terminal repeat HOO69_15540 PF00990 Diguanylate cyclase, GGDEF domain HOO69_15540 PF00563 EAL domain HOO69_15545 PF00132 Bacterial transferase hexapeptide (six repeats) HOO69_15580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HOO69_15580 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HOO69_15595 PF01042 Endoribonuclease L-PSP HOO69_15605 PF01048 Phosphorylase superfamily HOO69_15610 PF04973 Nicotinamide mononucleotide transporter HOO69_15615 PF12833 Helix-turn-helix domain HOO69_15615 PF02311 AraC-like ligand binding domain HOO69_15630 PF00113 Enolase, C-terminal TIM barrel domain HOO69_15630 PF03952 Enolase, N-terminal domain HOO69_15660 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HOO69_15660 PF06594 Haemolysin-type calcium binding protein related domain HOO69_15675 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HOO69_15675 PF06594 Haemolysin-type calcium binding protein related domain HOO69_15680 PF00664 ABC transporter transmembrane region HOO69_15680 PF00005 ABC transporter HOO69_15680 PF03412 Peptidase C39 family HOO69_15690 PF00005 ABC transporter HOO69_15690 PF00664 ABC transporter transmembrane region HOO69_15690 PF03412 Peptidase C39 family HOO69_15700 PF03466 LysR substrate binding domain HOO69_15700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_15710 PF00440 Bacterial regulatory proteins, tetR family HOO69_15730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_15730 PF02743 Cache domain HOO69_15730 PF00672 HAMP domain HOO69_15740 PF00529 HlyD membrane-fusion protein of T1SS HOO69_15745 PF00664 ABC transporter transmembrane region HOO69_15745 PF00005 ABC transporter HOO69_15750 PF00664 ABC transporter transmembrane region HOO69_15750 PF00005 ABC transporter HOO69_15785 PF00486 Transcriptional regulatory protein, C terminal HOO69_15785 PF00072 Response regulator receiver domain HOO69_15790 PF00512 His Kinase A (phospho-acceptor) domain HOO69_15790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_15790 PF00672 HAMP domain HOO69_15795 PF06123 Inner membrane protein CreD HOO69_15810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_15810 PF03466 LysR substrate binding domain HOO69_15825 PF18500 CadC C-terminal domain 1 HOO69_15825 PF00486 Transcriptional regulatory protein, C terminal HOO69_15865 PF00664 ABC transporter transmembrane region HOO69_15865 PF00005 ABC transporter HOO69_15865 PF03412 Peptidase C39 family HOO69_15870 PF02311 AraC-like ligand binding domain HOO69_15870 PF12833 Helix-turn-helix domain HOO69_15885 PF04002 RadC-like JAB domain HOO69_15930 PF01575 MaoC like domain HOO69_16040 PF13195 Protein of unknown function (DUF4011) HOO69_16040 PF13195 Protein of unknown function (DUF4011) HOO69_16040 PF13086 AAA domain HOO69_16040 PF13087 AAA domain HOO69_16040 PF13087 AAA domain HOO69_16040 PF13086 AAA domain HOO69_16045 PF06271 RDD family HOO69_16055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HOO69_16055 PF00205 Thiamine pyrophosphate enzyme, central domain HOO69_16055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HOO69_16060 PF00171 Aldehyde dehydrogenase family HOO69_16080 PF16295 Tetracyclin repressor-like, C-terminal domain HOO69_16080 PF00440 Bacterial regulatory proteins, tetR family HOO69_16085 PF00080 Copper/zinc superoxide dismutase (SODC) HOO69_16095 PF00199 Catalase HOO69_16095 PF06628 Catalase-related immune-responsive HOO69_16110 PF00464 Serine hydroxymethyltransferase HOO69_16120 PF00155 Aminotransferase class I and II HOO69_16145 PF02423 Ornithine cyclodeaminase/mu-crystallin family HOO69_16150 PF01168 Alanine racemase, N-terminal domain HOO69_16150 PF14031 Putative serine dehydratase domain HOO69_16190 PF13614 AAA domain HOO69_16195 PF08775 ParB family HOO69_16195 PF02195 ParB-like nuclease domain HOO69_16200 PF07690 Major Facilitator Superfamily HOO69_16205 PF01212 Beta-eliminating lyase HOO69_16220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_16220 PF03466 LysR substrate binding domain HOO69_16235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HOO69_16240 PF01161 Phosphatidylethanolamine-binding protein HOO69_16260 PF03222 Tryptophan/tyrosine permease family HOO69_16320 PF17871 AAA lid domain HOO69_16320 PF07724 AAA domain (Cdc48 subfamily) HOO69_16320 PF00004 ATPase family associated with various cellular activities (AAA) HOO69_16320 PF10431 C-terminal, D2-small domain, of ClpB protein HOO69_16345 PF16697 Inner membrane component of T3SS, cytoplasmic domain HOO69_16380 PF16671 Actin cross-linking domain HOO69_16380 PF04717 Type VI secretion system, phage-baseplate injector HOO69_16415 PF00486 Transcriptional regulatory protein, C terminal HOO69_16435 PF08534 Redoxin HOO69_16440 PF00171 Aldehyde dehydrogenase family HOO69_16455 PF01966 HD domain HOO69_16510 PF03466 LysR substrate binding domain HOO69_16510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_16530 PF08534 Redoxin HOO69_16535 PF08534 Redoxin HOO69_16545 PF01546 Peptidase family M20/M25/M40 HOO69_16545 PF07687 Peptidase dimerisation domain HOO69_16550 PF00107 Zinc-binding dehydrogenase HOO69_16550 PF08240 Alcohol dehydrogenase GroES-like domain HOO69_16565 PF03707 Bacterial signalling protein N terminal repeat HOO69_16565 PF00563 EAL domain HOO69_16565 PF00990 Diguanylate cyclase, GGDEF domain HOO69_16575 PF02080 TrkA-C domain HOO69_16575 PF03600 Citrate transporter HOO69_16580 PF00009 Elongation factor Tu GTP binding domain HOO69_16585 PF01507 Phosphoadenosine phosphosulfate reductase family HOO69_16590 PF00664 ABC transporter transmembrane region HOO69_16590 PF00005 ABC transporter HOO69_16595 PF01804 Penicillin amidase HOO69_16600 PF13193 AMP-binding enzyme C-terminal domain HOO69_16600 PF13193 AMP-binding enzyme C-terminal domain HOO69_16600 PF00668 Condensation domain HOO69_16600 PF00550 Phosphopantetheine attachment site HOO69_16600 PF00501 AMP-binding enzyme HOO69_16600 PF07993 Male sterility protein HOO69_16600 PF00501 AMP-binding enzyme HOO69_16600 PF00668 Condensation domain HOO69_16600 PF00550 Phosphopantetheine attachment site HOO69_16600 PF07993 Male sterility protein HOO69_16610 PF13193 AMP-binding enzyme C-terminal domain HOO69_16610 PF00668 Condensation domain HOO69_16610 PF00501 AMP-binding enzyme HOO69_16610 PF00550 Phosphopantetheine attachment site HOO69_16610 PF00668 Condensation domain HOO69_16610 PF00501 AMP-binding enzyme HOO69_16610 PF00550 Phosphopantetheine attachment site HOO69_16610 PF13193 AMP-binding enzyme C-terminal domain HOO69_16615 PF00975 Thioesterase domain HOO69_16615 PF00550 Phosphopantetheine attachment site HOO69_16615 PF00668 Condensation domain HOO69_16615 PF00501 AMP-binding enzyme HOO69_16615 PF13193 AMP-binding enzyme C-terminal domain HOO69_16625 PF05721 Phytanoyl-CoA dioxygenase (PhyH) HOO69_16635 PF00155 Aminotransferase class I and II HOO69_16640 PF02615 Malate/L-lactate dehydrogenase HOO69_16655 PF00975 Thioesterase domain HOO69_16665 PF00905 Penicillin binding protein transpeptidase domain HOO69_16665 PF03717 Penicillin-binding Protein dimerisation domain HOO69_16685 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HOO69_16810 PF17158 Membrane-associated sensor, integral membrane domain HOO69_16810 PF00990 Diguanylate cyclase, GGDEF domain HOO69_16850 PF03459 TOBE domain HOO69_16850 PF00005 ABC transporter HOO69_16850 PF17912 MalK OB fold domain HOO69_16855 PF13419 Haloacid dehalogenase-like hydrolase HOO69_16870 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_16875 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_16880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_16880 PF03466 LysR substrate binding domain HOO69_16885 PF00893 Small Multidrug Resistance protein HOO69_16895 PF07690 Major Facilitator Superfamily HOO69_16900 PF06224 Winged helix DNA-binding domain HOO69_16905 PF00109 Beta-ketoacyl synthase, N-terminal domain HOO69_16905 PF16197 Ketoacyl-synthetase C-terminal extension HOO69_16905 PF08240 Alcohol dehydrogenase GroES-like domain HOO69_16905 PF02801 Beta-ketoacyl synthase, C-terminal domain HOO69_16905 PF08659 KR domain HOO69_16905 PF00550 Phosphopantetheine attachment site HOO69_16905 PF14765 Polyketide synthase dehydratase HOO69_16905 PF00698 Acyl transferase domain HOO69_16915 PF02965 Vitamin B12 dependent methionine synthase, activation domain HOO69_16915 PF02574 Homocysteine S-methyltransferase HOO69_16915 PF02310 B12 binding domain HOO69_16915 PF00809 Pterin binding enzyme HOO69_16915 PF02607 B12 binding domain HOO69_16920 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HOO69_16920 PF11490 DNA polymerase III polC-type N-terminus II HOO69_16920 PF07733 Bacterial DNA polymerase III alpha NTPase domain HOO69_16920 PF00929 Exonuclease HOO69_16920 PF02811 PHP domain HOO69_16920 PF14579 Helix-hairpin-helix motif HOO69_16935 PF00990 Diguanylate cyclase, GGDEF domain HOO69_16935 PF00072 Response regulator receiver domain HOO69_16945 PF02743 Cache domain HOO69_16945 PF00672 HAMP domain HOO69_16945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_16950 PF01339 CheB methylesterase HOO69_16950 PF00072 Response regulator receiver domain HOO69_16955 PF03975 CheD chemotactic sensory transduction HOO69_16960 PF01739 CheR methyltransferase, SAM binding domain HOO69_16960 PF03705 CheR methyltransferase, all-alpha domain HOO69_16965 PF00672 HAMP domain HOO69_16965 PF02203 Tar ligand binding domain homologue HOO69_16965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_16970 PF01584 CheW-like domain HOO69_16975 PF01584 CheW-like domain HOO69_16980 PF01627 Hpt domain HOO69_16980 PF02895 Signal transducing histidine kinase, homodimeric domain HOO69_16980 PF09078 CheY binding HOO69_16980 PF01584 CheW-like domain HOO69_16980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_16985 PF00072 Response regulator receiver domain HOO69_16995 PF05127 Helicase HOO69_16995 PF13718 GNAT acetyltransferase 2 HOO69_17000 PF02195 ParB-like nuclease domain HOO69_17000 PF08775 ParB family HOO69_17005 PF13614 AAA domain HOO69_17005 PF18607 ParA helix turn helix domain HOO69_17025 PF00005 ABC transporter HOO69_17025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HOO69_17030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HOO69_17030 PF00005 ABC transporter HOO69_17045 PF01709 Transcriptional regulator HOO69_17075 PF01638 HxlR-like helix-turn-helix HOO69_17090 PF08803 Putative mono-oxygenase ydhR HOO69_17095 PF03466 LysR substrate binding domain HOO69_17095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_17100 PF12464 Maltose acetyltransferase HOO69_17100 PF14602 Hexapeptide repeat of succinyl-transferase HOO69_17105 PF00313 'Cold-shock' DNA-binding domain HOO69_17115 PF02001 Protein of unknown function DUF134 HOO69_17130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_17130 PF03466 LysR substrate binding domain HOO69_17150 PF00892 EamA-like transporter family HOO69_17180 PF00027 Cyclic nucleotide-binding domain HOO69_17180 PF13545 Crp-like helix-turn-helix domain HOO69_17185 PF02586 SOS response associated peptidase (SRAP) HOO69_17195 PF01047 MarR family HOO69_17205 PF01274 Malate synthase HOO69_17210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HOO69_17210 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HOO69_17210 PF00205 Thiamine pyrophosphate enzyme, central domain HOO69_17220 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HOO69_17220 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HOO69_17225 PF13556 PucR C-terminal helix-turn-helix domain HOO69_17225 PF17853 GGDEF-like domain HOO69_17225 PF05651 Putative sugar diacid recognition HOO69_17230 PF02447 GntP family permease HOO69_17235 PF02595 Glycerate kinase family HOO69_17240 PF04013 Putative SAM-dependent RNA methyltransferase HOO69_17280 PF07969 Amidohydrolase family HOO69_17285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_17285 PF03466 LysR substrate binding domain HOO69_17295 PF00881 Nitroreductase family HOO69_17300 PF00582 Universal stress protein family HOO69_17305 PF00232 Glycosyl hydrolase family 1 HOO69_17335 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HOO69_17335 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HOO69_17340 PF03480 Bacterial extracellular solute-binding protein, family 7 HOO69_17355 PF03717 Penicillin-binding Protein dimerisation domain HOO69_17355 PF00905 Penicillin binding protein transpeptidase domain HOO69_17375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_17375 PF03466 LysR substrate binding domain HOO69_17385 PF08543 Phosphomethylpyrimidine kinase HOO69_17390 PF00005 ABC transporter HOO69_17395 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_17400 PF09084 NMT1/THI5 like HOO69_17405 PF03070 TENA/THI-4/PQQC family HOO69_17410 PF13185 GAF domain HOO69_17410 PF00990 Diguanylate cyclase, GGDEF domain HOO69_17415 PF01569 PAP2 superfamily HOO69_17440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_17440 PF03466 LysR substrate binding domain HOO69_17475 PF08525 Opacity-associated protein A N-terminal motif HOO69_17475 PF01551 Peptidase family M23 HOO69_17475 PF01476 LysM domain HOO69_17480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_17480 PF03466 LysR substrate binding domain HOO69_17485 PF08240 Alcohol dehydrogenase GroES-like domain HOO69_17485 PF00107 Zinc-binding dehydrogenase HOO69_17490 PF00117 Glutamine amidotransferase class-I HOO69_17490 PF02540 NAD synthase HOO69_17490 PF00958 GMP synthase C terminal domain HOO69_17505 PF04542 Sigma-70 region 2 HOO69_17505 PF08281 Sigma-70, region 4 HOO69_17545 PF04972 BON domain HOO69_17545 PF13629 Pilus formation protein N terminal region HOO69_17545 PF00263 Bacterial type II and III secretion system protein HOO69_17555 PF10609 NUBPL iron-transfer P-loop NTPase HOO69_17560 PF00437 Type II/IV secretion system protein HOO69_17580 PF00691 OmpA family HOO69_17585 PF01124 MAPEG family HOO69_17605 PF12697 Alpha/beta hydrolase family HOO69_17615 PF00106 short chain dehydrogenase HOO69_17620 PF00939 Sodium:sulfate symporter transmembrane region HOO69_17625 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HOO69_17630 PF07683 Cobalamin synthesis protein cobW C-terminal domain HOO69_17630 PF02492 CobW/HypB/UreG, nucleotide-binding domain HOO69_17635 PF01979 Amidohydrolase family HOO69_17645 PF02627 Carboxymuconolactone decarboxylase family HOO69_17655 PF03466 LysR substrate binding domain HOO69_17655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_17665 PF07690 Major Facilitator Superfamily HOO69_17670 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HOO69_17675 PF00171 Aldehyde dehydrogenase family HOO69_17680 PF00672 HAMP domain HOO69_17680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_17680 PF17200 Single Cache domain 2 HOO69_17695 PF00132 Bacterial transferase hexapeptide (six repeats) HOO69_17700 PF10928 Protein of unknown function (DUF2810) HOO69_17705 PF00455 DeoR C terminal sensor domain HOO69_17705 PF08220 DeoR-like helix-turn-helix domain HOO69_17720 PF00465 Iron-containing alcohol dehydrogenase HOO69_17725 PF13419 Haloacid dehalogenase-like hydrolase HOO69_17730 PF00923 Transaldolase/Fructose-6-phosphate aldolase HOO69_17735 PF00456 Transketolase, thiamine diphosphate binding domain HOO69_17735 PF02779 Transketolase, pyrimidine binding domain HOO69_17735 PF02780 Transketolase, C-terminal domain HOO69_17740 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HOO69_17745 PF01546 Peptidase family M20/M25/M40 HOO69_17750 PF02378 Phosphotransferase system, EIIC HOO69_17750 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HOO69_17750 PF00367 phosphotransferase system, EIIB HOO69_17760 PF03222 Tryptophan/tyrosine permease family HOO69_17765 PF17874 MalT-like TPR region HOO69_17765 PF00196 Bacterial regulatory proteins, luxR family HOO69_17770 PF00343 Carbohydrate phosphorylase HOO69_17775 PF02446 4-alpha-glucanotransferase HOO69_17780 PF02806 Alpha amylase, C-terminal all-beta domain HOO69_17780 PF00128 Alpha amylase, catalytic domain HOO69_17780 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HOO69_17795 PF00472 RF-1 domain HOO69_17810 PF00486 Transcriptional regulatory protein, C terminal HOO69_17845 PF00561 alpha/beta hydrolase fold HOO69_17850 PF00132 Bacterial transferase hexapeptide (six repeats) HOO69_17860 PF02678 Pirin HOO69_17860 PF05726 Pirin C-terminal cupin domain HOO69_17880 PF00664 ABC transporter transmembrane region HOO69_17880 PF00005 ABC transporter HOO69_17895 PF00962 Adenosine/AMP deaminase HOO69_17910 PF01032 FecCD transport family HOO69_17915 PF01497 Periplasmic binding protein HOO69_17920 PF00005 ABC transporter HOO69_17925 PF07690 Major Facilitator Superfamily HOO69_17940 PF03616 Sodium/glutamate symporter HOO69_17945 PF12945 Flagellar protein YcgR HOO69_17945 PF07238 PilZ domain HOO69_17960 PF00583 Acetyltransferase (GNAT) family HOO69_17970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HOO69_17975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_17975 PF03466 LysR substrate binding domain HOO69_17980 PF00764 Arginosuccinate synthase HOO69_18010 PF01047 MarR family HOO69_18020 PF00083 Sugar (and other) transporter HOO69_18030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_18030 PF00512 His Kinase A (phospho-acceptor) domain HOO69_18030 PF08521 Two-component sensor kinase N-terminal HOO69_18035 PF00486 Transcriptional regulatory protein, C terminal HOO69_18035 PF00072 Response regulator receiver domain HOO69_18040 PF04116 Fatty acid hydroxylase superfamily HOO69_18060 PF00873 AcrB/AcrD/AcrF family HOO69_18075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_18075 PF03466 LysR substrate binding domain HOO69_18105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HOO69_18105 PF12793 Sugar transport-related sRNA regulator N-term HOO69_18110 PF00392 Bacterial regulatory proteins, gntR family HOO69_18110 PF00155 Aminotransferase class I and II HOO69_18120 PF00111 2Fe-2S iron-sulfur cluster binding domain HOO69_18120 PF00175 Oxidoreductase NAD-binding domain HOO69_18120 PF00970 Oxidoreductase FAD-binding domain HOO69_18125 PF03063 Prismane/CO dehydrogenase family HOO69_18135 PF01569 PAP2 superfamily HOO69_18145 PF13936 Helix-turn-helix domain HOO69_18145 PF04198 Putative sugar-binding domain HOO69_18150 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HOO69_18155 PF02502 Ribose/Galactose Isomerase HOO69_18160 PF03480 Bacterial extracellular solute-binding protein, family 7 HOO69_18170 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HOO69_18175 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HOO69_18180 PF02733 Dak1 domain HOO69_18185 PF02734 DAK2 domain HOO69_18190 PF00121 Triosephosphate isomerase HOO69_18195 PF03547 Membrane transport protein HOO69_18205 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HOO69_18205 PF00925 GTP cyclohydrolase II HOO69_18210 PF00158 Sigma-54 interaction domain HOO69_18210 PF01590 GAF domain HOO69_18215 PF02311 AraC-like ligand binding domain HOO69_18215 PF12833 Helix-turn-helix domain HOO69_18230 PF07690 Major Facilitator Superfamily HOO69_18240 PF03992 Antibiotic biosynthesis monooxygenase HOO69_18255 PF00497 Bacterial extracellular solute-binding proteins, family 3 HOO69_18260 PF00155 Aminotransferase class I and II HOO69_18265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_18265 PF03466 LysR substrate binding domain HOO69_18280 PF07690 Major Facilitator Superfamily HOO69_18285 PF01979 Amidohydrolase family HOO69_18290 PF00480 ROK family HOO69_18295 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase HOO69_18300 PF03480 Bacterial extracellular solute-binding protein, family 7 HOO69_18305 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HOO69_18310 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HOO69_18315 PF00701 Dihydrodipicolinate synthetase family HOO69_18320 PF01380 SIS domain HOO69_18320 PF01418 Helix-turn-helix domain, rpiR family HOO69_18325 PF01344 Kelch motif HOO69_18330 PF07646 Kelch motif HOO69_18335 PF13088 BNR repeat-like domain HOO69_18335 PF09264 Vibrio cholerae sialidase, lectin insertion HOO69_18340 PF17158 Membrane-associated sensor, integral membrane domain HOO69_18340 PF00990 Diguanylate cyclase, GGDEF domain HOO69_18345 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HOO69_18345 PF00128 Alpha amylase, catalytic domain HOO69_18350 PF02264 LamB porin HOO69_18355 PF07148 Maltose operon periplasmic protein precursor (MalM) HOO69_18365 PF03466 LysR substrate binding domain HOO69_18365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_18370 PF02525 Flavodoxin-like fold HOO69_18380 PF00730 HhH-GPD superfamily base excision DNA repair protein HOO69_18380 PF06029 AlkA N-terminal domain HOO69_18385 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HOO69_18385 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HOO69_18395 PF03600 Citrate transporter HOO69_18400 PF07670 Nucleoside recognition HOO69_18405 PF07670 Nucleoside recognition HOO69_18410 PF07687 Peptidase dimerisation domain HOO69_18410 PF01546 Peptidase family M20/M25/M40 HOO69_18415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_18415 PF03466 LysR substrate binding domain HOO69_18430 PF07715 TonB-dependent Receptor Plug Domain HOO69_18430 PF00593 TonB dependent receptor HOO69_18440 PF01557 Fumarylacetoacetate (FAA) hydrolase family HOO69_18460 PF01810 LysE type translocator HOO69_18465 PF00583 Acetyltransferase (GNAT) family HOO69_18475 PF02683 Cytochrome C biogenesis protein transmembrane region HOO69_18475 PF11412 Disulphide bond corrector protein DsbC HOO69_18480 PF00578 AhpC/TSA family HOO69_18490 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HOO69_18490 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HOO69_18490 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HOO69_18490 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HOO69_18500 PF00115 Cytochrome C and Quinol oxidase polypeptide I HOO69_18505 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 HOO69_18510 PF00510 Cytochrome c oxidase subunit III HOO69_18530 PF02628 Cytochrome oxidase assembly protein HOO69_18535 PF01040 UbiA prenyltransferase family HOO69_18545 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_18550 PF00497 Bacterial extracellular solute-binding proteins, family 3 HOO69_18555 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_18560 PF00005 ABC transporter HOO69_18565 PF00793 DAHP synthetase I family HOO69_18575 PF00571 CBS domain HOO69_18575 PF00005 ABC transporter HOO69_18580 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_18590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HOO69_18590 PF12793 Sugar transport-related sRNA regulator N-term HOO69_18615 PF04972 BON domain HOO69_18615 PF00263 Bacterial type II and III secretion system protein HOO69_18615 PF13629 Pilus formation protein N terminal region HOO69_18625 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HOO69_18630 PF00437 Type II/IV secretion system protein HOO69_18680 PF02424 ApbE family HOO69_18685 PF02683 Cytochrome C biogenesis protein transmembrane region HOO69_18685 PF11412 Disulphide bond corrector protein DsbC HOO69_18690 PF00171 Aldehyde dehydrogenase family HOO69_18695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_18695 PF03466 LysR substrate binding domain HOO69_18700 PF00106 short chain dehydrogenase HOO69_18725 PF00375 Sodium:dicarboxylate symporter family HOO69_18730 PF03193 RsgA GTPase HOO69_18740 PF02630 SCO1/SenC HOO69_18750 PF13302 Acetyltransferase (GNAT) domain HOO69_18755 PF01966 HD domain HOO69_18760 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HOO69_18765 PF01212 Beta-eliminating lyase HOO69_18770 PF08329 Chitinase A, N-terminal domain HOO69_18770 PF00704 Glycosyl hydrolases family 18 HOO69_18775 PF00005 ABC transporter HOO69_18775 PF03412 Peptidase C39 family HOO69_18775 PF00664 ABC transporter transmembrane region HOO69_18790 PF00529 HlyD membrane-fusion protein of T1SS HOO69_18805 PF03781 Sulfatase-modifying factor enzyme 1 HOO69_18815 PF12833 Helix-turn-helix domain HOO69_18820 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HOO69_18820 PF14850 DNA-binding domain of Proline dehydrogenase HOO69_18820 PF00171 Aldehyde dehydrogenase family HOO69_18820 PF01619 Proline dehydrogenase HOO69_18830 PF00474 Sodium:solute symporter family HOO69_18840 PF01037 Lrp/AsnC ligand binding domain HOO69_18860 PF12729 Four helix bundle sensory module for signal transduction HOO69_18860 PF00672 HAMP domain HOO69_18860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_18865 PF00583 Acetyltransferase (GNAT) family HOO69_18880 PF06942 GlpM protein HOO69_18890 PF00005 ABC transporter HOO69_18890 PF12558 ATP-binding cassette cobalt transporter HOO69_18900 PF00529 HlyD membrane-fusion protein of T1SS HOO69_18900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HOO69_18905 PF11742 Protein of unknown function (DUF3302) HOO69_18910 PF00990 Diguanylate cyclase, GGDEF domain HOO69_18925 PF01048 Phosphorylase superfamily HOO69_18930 PF08349 Protein of unknown function (DUF1722) HOO69_18935 PF13411 MerR HTH family regulatory protein HOO69_18940 PF03441 FAD binding domain of DNA photolyase HOO69_18940 PF00875 DNA photolyase HOO69_18945 PF03734 L,D-transpeptidase catalytic domain HOO69_18945 PF01476 LysM domain HOO69_18945 PF17969 L,D-transpeptidase C-terminal domain HOO69_18955 PF00270 DEAD/DEAH box helicase HOO69_18955 PF00271 Helicase conserved C-terminal domain HOO69_18965 PF00271 Helicase conserved C-terminal domain HOO69_18965 PF03880 DbpA RNA binding domain HOO69_18965 PF00270 DEAD/DEAH box helicase HOO69_18970 PF00575 S1 RNA binding domain HOO69_18970 PF08206 Ribonuclease B OB domain HOO69_18970 PF00773 RNB domain HOO69_18985 PF12849 PBP superfamily domain HOO69_18995 PF16200 C-terminal region of band_7 HOO69_18995 PF01145 SPFH domain / Band 7 family HOO69_19010 PF11975 Family 4 glycosyl hydrolase C-terminal domain HOO69_19010 PF02056 Family 4 glycosyl hydrolase HOO69_19015 PF12833 Helix-turn-helix domain HOO69_19020 PF00005 ABC transporter HOO69_19020 PF08402 TOBE domain HOO69_19025 PF01547 Bacterial extracellular solute-binding protein HOO69_19030 PF14785 Maltose transport system permease protein MalF P2 domain HOO69_19030 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_19035 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_19060 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HOO69_19060 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HOO69_19075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_19075 PF01627 Hpt domain HOO69_19075 PF00672 HAMP domain HOO69_19075 PF00072 Response regulator receiver domain HOO69_19075 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HOO69_19075 PF00512 His Kinase A (phospho-acceptor) domain HOO69_19080 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HOO69_19085 PF07969 Amidohydrolase family HOO69_19090 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HOO69_19095 PF00571 CBS domain HOO69_19095 PF01769 Divalent cation transporter HOO69_19095 PF03448 MgtE intracellular N domain HOO69_19100 PF13533 Biotin-lipoyl like HOO69_19120 PF00155 Aminotransferase class I and II HOO69_19120 PF00392 Bacterial regulatory proteins, gntR family HOO69_19125 PF13230 Glutamine amidotransferases class-II HOO69_19135 PF13520 Amino acid permease HOO69_19140 PF01037 Lrp/AsnC ligand binding domain HOO69_19140 PF13404 AsnC-type helix-turn-helix domain HOO69_19145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_19145 PF03466 LysR substrate binding domain HOO69_19155 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HOO69_19160 PF02566 OsmC-like protein HOO69_19165 PF00892 EamA-like transporter family HOO69_19190 PF13519 von Willebrand factor type A domain HOO69_19195 PF07584 Aerotolerance regulator N-terminal HOO69_19195 PF00092 von Willebrand factor type A domain HOO69_19205 PF01882 Protein of unknown function DUF58 HOO69_19210 PF07726 ATPase family associated with various cellular activities (AAA) HOO69_19210 PF17863 AAA lid domain HOO69_19215 PF00672 HAMP domain HOO69_19215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_19215 PF02743 Cache domain HOO69_19230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_19230 PF03466 LysR substrate binding domain HOO69_19250 PF08267 Cobalamin-independent synthase, N-terminal domain HOO69_19250 PF01717 Cobalamin-independent synthase, Catalytic domain HOO69_19255 PF00990 Diguanylate cyclase, GGDEF domain HOO69_19265 PF01679 Proteolipid membrane potential modulator HOO69_19270 PF03476 MOSC N-terminal beta barrel domain HOO69_19270 PF03473 MOSC domain HOO69_19270 PF03473 MOSC domain HOO69_19270 PF03476 MOSC N-terminal beta barrel domain HOO69_19270 PF00111 2Fe-2S iron-sulfur cluster binding domain HOO69_19270 PF00111 2Fe-2S iron-sulfur cluster binding domain HOO69_19275 PF17151 Periplasmic sensor domain HOO69_19275 PF00990 Diguanylate cyclase, GGDEF domain HOO69_19290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HOO69_19295 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_19305 PF00005 ABC transporter HOO69_19305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HOO69_19320 PF00128 Alpha amylase, catalytic domain HOO69_19325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_19325 PF02743 Cache domain HOO69_19325 PF00672 HAMP domain HOO69_19340 PF02540 NAD synthase HOO69_19345 PF01467 Cytidylyltransferase-like HOO69_19355 PF00563 EAL domain HOO69_19355 PF00990 Diguanylate cyclase, GGDEF domain HOO69_19355 PF03707 Bacterial signalling protein N terminal repeat HOO69_19355 PF13188 PAS domain HOO69_19360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_19360 PF03466 LysR substrate binding domain HOO69_19365 PF07690 Major Facilitator Superfamily HOO69_19380 PF00462 Glutaredoxin HOO69_19385 PF00892 EamA-like transporter family HOO69_19395 PF01554 MatE HOO69_19400 PF02254 TrkA-N domain HOO69_19400 PF00999 Sodium/hydrogen exchanger family HOO69_19405 PF02525 Flavodoxin-like fold HOO69_19420 PF00158 Sigma-54 interaction domain HOO69_19420 PF01590 GAF domain HOO69_19425 PF00175 Oxidoreductase NAD-binding domain HOO69_19425 PF00042 Globin HOO69_19425 PF00970 Oxidoreductase FAD-binding domain HOO69_19440 PF00313 'Cold-shock' DNA-binding domain HOO69_19445 PF03889 Alternative ribosome-rescue factor A HOO69_19460 PF00768 D-alanyl-D-alanine carboxypeptidase HOO69_19460 PF07943 Penicillin-binding protein 5, C-terminal domain HOO69_19465 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading HOO69_19465 PF18416 N-acetylglucosamine binding protein domain 2 HOO69_19480 PF12843 Putative quorum-sensing-regulated virulence factor HOO69_19495 PF08281 Sigma-70, region 4 HOO69_19495 PF04542 Sigma-70 region 2 HOO69_19500 PF03795 YCII-related domain HOO69_19505 PF00465 Iron-containing alcohol dehydrogenase HOO69_19515 PF03466 LysR substrate binding domain HOO69_19515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_19520 PF13419 Haloacid dehalogenase-like hydrolase HOO69_19545 PF13419 Haloacid dehalogenase-like hydrolase HOO69_19555 PF00266 Aminotransferase class-V HOO69_19570 PF00005 ABC transporter HOO69_19575 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_19580 PF07702 UTRA domain HOO69_19580 PF00392 Bacterial regulatory proteins, gntR family HOO69_19600 PF18027 Cytosolic carboxypeptidase N-terminal domain HOO69_19600 PF00246 Zinc carboxypeptidase HOO69_19605 PF01266 FAD dependent oxidoreductase HOO69_19610 PF03466 LysR substrate binding domain HOO69_19610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_19615 PF03313 Serine dehydratase alpha chain HOO69_19615 PF03315 Serine dehydratase beta chain HOO69_19635 PF00990 Diguanylate cyclase, GGDEF domain HOO69_19640 PF00072 Response regulator receiver domain HOO69_19640 PF01584 CheW-like domain HOO69_19650 PF02872 5'-nucleotidase, C-terminal domain HOO69_19650 PF00149 Calcineurin-like phosphoesterase HOO69_19655 PF00034 Cytochrome c HOO69_19660 PF01212 Beta-eliminating lyase HOO69_19665 PF00293 NUDIX domain HOO69_19670 PF07728 AAA domain (dynein-related subfamily) HOO69_19670 PF17868 AAA lid domain HOO69_19670 PF12592 Protein of unknown function (DUF3763) HOO69_19675 PF05762 VWA domain containing CoxE-like protein HOO69_19680 PF07690 Major Facilitator Superfamily HOO69_19695 PF01037 Lrp/AsnC ligand binding domain HOO69_19700 PF17156 Gammaproteobacterial periplasmic sensor domain HOO69_19700 PF00990 Diguanylate cyclase, GGDEF domain HOO69_19705 PF01047 MarR family HOO69_19710 PF02028 BCCT, betaine/carnitine/choline family transporter HOO69_19715 PF00929 Exonuclease HOO69_19725 PF01268 Formate--tetrahydrofolate ligase HOO69_19745 PF00672 HAMP domain HOO69_19745 PF00909 Ammonium Transporter Family HOO69_19750 PF01497 Periplasmic binding protein HOO69_19755 PF07715 TonB-dependent Receptor Plug Domain HOO69_19755 PF00593 TonB dependent receptor HOO69_19760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_19760 PF16750 Sensor domain of 2-component histidine kinase HOO69_19760 PF00672 HAMP domain HOO69_19760 PF00512 His Kinase A (phospho-acceptor) domain HOO69_19765 PF00072 Response regulator receiver domain HOO69_19765 PF00486 Transcriptional regulatory protein, C terminal HOO69_19770 PF08774 VRR-NUC domain HOO69_19770 PF18081 Fanconi anemia-associated nuclease SAP domain HOO69_19785 PF00672 HAMP domain HOO69_19785 PF17200 Single Cache domain 2 HOO69_19785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_19795 PF01012 Electron transfer flavoprotein domain HOO69_19800 PF01012 Electron transfer flavoprotein domain HOO69_19800 PF00766 Electron transfer flavoprotein FAD-binding domain HOO69_19805 PF12729 Four helix bundle sensory module for signal transduction HOO69_19805 PF00672 HAMP domain HOO69_19805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_19810 PF02817 e3 binding domain HOO69_19810 PF00364 Biotin-requiring enzyme HOO69_19810 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HOO69_19815 PF02779 Transketolase, pyrimidine binding domain HOO69_19815 PF02780 Transketolase, C-terminal domain HOO69_19820 PF00676 Dehydrogenase E1 component HOO69_19825 PF01235 Sodium:alanine symporter family HOO69_19840 PF17200 Single Cache domain 2 HOO69_19840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_19840 PF00672 HAMP domain HOO69_19845 PF00990 Diguanylate cyclase, GGDEF domain HOO69_19865 PF00990 Diguanylate cyclase, GGDEF domain HOO69_19865 PF05230 MASE2 domain HOO69_19870 PF00072 Response regulator receiver domain HOO69_19875 PF00682 HMGL-like HOO69_19880 PF00378 Enoyl-CoA hydratase/isomerase HOO69_19885 PF01039 Carboxyl transferase domain HOO69_19890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HOO69_19890 PF02770 Acyl-CoA dehydrogenase, middle domain HOO69_19890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HOO69_19895 PF00376 MerR family regulatory protein HOO69_19895 PF09278 MerR, DNA binding HOO69_19900 PF00108 Thiolase, N-terminal domain HOO69_19900 PF02803 Thiolase, C-terminal domain HOO69_19905 PF00171 Aldehyde dehydrogenase family HOO69_19910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HOO69_19910 PF02770 Acyl-CoA dehydrogenase, middle domain HOO69_19910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HOO69_19915 PF00378 Enoyl-CoA hydratase/isomerase HOO69_19920 PF00378 Enoyl-CoA hydratase/isomerase HOO69_19925 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HOO69_19925 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HOO69_19935 PF12729 Four helix bundle sensory module for signal transduction HOO69_19935 PF00672 HAMP domain HOO69_19935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_19945 PF04237 YjbR HOO69_19955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_19955 PF03466 LysR substrate binding domain HOO69_19960 PF01565 FAD binding domain HOO69_19960 PF09330 D-lactate dehydrogenase, membrane binding HOO69_19975 PF00563 EAL domain HOO69_19975 PF00990 Diguanylate cyclase, GGDEF domain HOO69_19975 PF08448 PAS fold HOO69_19990 PF01568 Molydopterin dinucleotide binding domain HOO69_19990 PF00384 Molybdopterin oxidoreductase HOO69_19990 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HOO69_19995 PF10414 Sirohaem synthase dimerisation region HOO69_19995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HOO69_20000 PF02885 Glycosyl transferase family, helical bundle domain HOO69_20000 PF00591 Glycosyl transferase family, a/b domain HOO69_20005 PF00072 Response regulator receiver domain HOO69_20005 PF03861 ANTAR domain HOO69_20010 PF00005 ABC transporter HOO69_20015 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_20020 PF00005 ABC transporter HOO69_20025 PF13806 Rieske-like [2Fe-2S] domain HOO69_20025 PF18267 Rubredoxin NAD+ reductase C-terminal domain HOO69_20025 PF07992 Pyridine nucleotide-disulphide oxidoreductase HOO69_20025 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HOO69_20025 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HOO69_20025 PF04324 BFD-like [2Fe-2S] binding domain HOO69_20030 PF13806 Rieske-like [2Fe-2S] domain HOO69_20035 PF00196 Bacterial regulatory proteins, luxR family HOO69_20035 PF00072 Response regulator receiver domain HOO69_20045 PF00563 EAL domain HOO69_20045 PF00990 Diguanylate cyclase, GGDEF domain HOO69_20045 PF03707 Bacterial signalling protein N terminal repeat HOO69_20075 PF11756 Nitrous oxide-stimulated promoter HOO69_20080 PF07690 Major Facilitator Superfamily HOO69_20085 PF00085 Thioredoxin HOO69_20090 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HOO69_20090 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HOO69_20095 PF00149 Calcineurin-like phosphoesterase HOO69_20095 PF12320 Type 5 capsule protein repressor C-terminal domain HOO69_20100 PF13476 AAA domain HOO69_20105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_20105 PF00072 Response regulator receiver domain HOO69_20110 PF00155 Aminotransferase class I and II HOO69_20120 PF00654 Voltage gated chloride channel HOO69_20125 PF07683 Cobalamin synthesis protein cobW C-terminal domain HOO69_20125 PF02492 CobW/HypB/UreG, nucleotide-binding domain HOO69_20130 PF01926 50S ribosome-binding GTPase HOO69_20140 PF06082 Exopolysaccharide biosynthesis protein YbjH HOO69_20150 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF HOO69_20160 PF02563 Polysaccharide biosynthesis/export protein HOO69_20160 PF10531 SLBB domain HOO69_20170 PF00571 CBS domain HOO69_20170 PF01380 SIS domain HOO69_20175 PF01061 ABC-2 type transporter HOO69_20180 PF00005 ABC transporter HOO69_20195 PF05159 Capsule polysaccharide biosynthesis protein HOO69_20205 PF02348 Cytidylyltransferase HOO69_20210 PF00793 DAHP synthetase I family HOO69_20215 PF00953 Glycosyl transferase family 4 HOO69_20230 PF00202 Aminotransferase class-III HOO69_20235 PF00171 Aldehyde dehydrogenase family HOO69_20235 PF00465 Iron-containing alcohol dehydrogenase HOO69_20270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_20270 PF08447 PAS fold HOO69_20275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HOO69_20280 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_20285 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_20285 PF12911 N-terminal TM domain of oligopeptide transport permease C HOO69_20290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HOO69_20290 PF00005 ABC transporter HOO69_20300 PF00990 Diguanylate cyclase, GGDEF domain HOO69_20300 PF00563 EAL domain HOO69_20310 PF00072 Response regulator receiver domain HOO69_20310 PF00196 Bacterial regulatory proteins, luxR family HOO69_20330 PF01032 FecCD transport family HOO69_20335 PF01032 FecCD transport family HOO69_20340 PF00005 ABC transporter HOO69_20345 PF13411 MerR HTH family regulatory protein HOO69_20350 PF13609 Gram-negative porin HOO69_20360 PF07715 TonB-dependent Receptor Plug Domain HOO69_20360 PF00593 TonB dependent receptor HOO69_20365 PF00990 Diguanylate cyclase, GGDEF domain HOO69_20365 PF03707 Bacterial signalling protein N terminal repeat HOO69_20365 PF00563 EAL domain HOO69_20370 PF00871 Acetokinase family HOO69_20375 PF13495 Phage integrase, N-terminal SAM-like domain HOO69_20375 PF00589 Phage integrase family HOO69_20490 PF02694 Uncharacterised BCR, YnfA/UPF0060 family HOO69_20540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HOO69_20540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HOO69_20555 PF05656 Protein of unknown function (DUF805) HOO69_20575 PF13302 Acetyltransferase (GNAT) domain HOO69_20585 PF00293 NUDIX domain HOO69_20585 PF13344 Haloacid dehalogenase-like hydrolase HOO69_20610 PF00043 Glutathione S-transferase, C-terminal domain HOO69_20610 PF02798 Glutathione S-transferase, N-terminal domain HOO69_20635 PF09905 DNA-binding protein VF530 HOO69_20660 PF00440 Bacterial regulatory proteins, tetR family HOO69_20660 PF08361 MAATS-type transcriptional repressor, C-terminal region HOO69_20665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HOO69_20675 PF00873 AcrB/AcrD/AcrF family HOO69_20680 PF00106 short chain dehydrogenase HOO69_20685 PF00108 Thiolase, N-terminal domain HOO69_20685 PF02803 Thiolase, C-terminal domain HOO69_20695 PF00561 alpha/beta hydrolase fold HOO69_20695 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus HOO69_20700 PF01177 Asp/Glu/Hydantoin racemase HOO69_20705 PF07690 Major Facilitator Superfamily HOO69_20710 PF00657 GDSL-like Lipase/Acylhydrolase HOO69_20715 PF01117 Aerolysin toxin HOO69_20715 PF03440 Aerolysin/Pertussis toxin (APT) domain HOO69_20720 PF00801 PKD domain HOO69_20720 PF05547 Immune inhibitor A peptidase M6 HOO69_20760 PF07992 Pyridine nucleotide-disulphide oxidoreductase HOO69_20760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HOO69_20775 PF00873 AcrB/AcrD/AcrF family HOO69_20780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HOO69_20790 PF13597 Anaerobic ribonucleoside-triphosphate reductase HOO69_20790 PF03477 ATP cone domain HOO69_20800 PF00155 Aminotransferase class I and II HOO69_20805 PF08443 RimK-like ATP-grasp domain HOO69_20805 PF18030 RimK PreATP-grasp domain HOO69_20810 PF00293 NUDIX domain HOO69_20815 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HOO69_20815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HOO69_20825 PF00691 OmpA family HOO69_20825 PF05736 OprF membrane domain HOO69_20830 PF00072 Response regulator receiver domain HOO69_20840 PF04363 Protein of unknown function (DUF496) HOO69_20855 PF01541 GIY-YIG catalytic domain HOO69_20865 PF13407 Periplasmic binding protein domain HOO69_20870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_20870 PF09308 LuxQ, periplasmic HOO69_20870 PF00512 His Kinase A (phospho-acceptor) domain HOO69_20870 PF00072 Response regulator receiver domain HOO69_20890 PF12805 FUSC-like inner membrane protein yccS HOO69_20895 PF13361 UvrD-like helicase C-terminal domain HOO69_20895 PF12462 DNA helicase IV / RNA helicase N terminal HOO69_20895 PF00580 UvrD/REP helicase N-terminal domain HOO69_20915 PF00684 DnaJ central domain HOO69_20915 PF01556 DnaJ C terminal domain HOO69_20915 PF00226 DnaJ domain HOO69_20925 PF00005 ABC transporter HOO69_20930 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_20935 PF13302 Acetyltransferase (GNAT) domain HOO69_20945 PF00990 Diguanylate cyclase, GGDEF domain HOO69_20945 PF00498 FHA domain HOO69_20945 PF00563 EAL domain HOO69_20950 PF12241 Trans-2-enoyl-CoA reductase catalytic region HOO69_20950 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HOO69_20950 PF07055 Enoyl reductase FAD binding domain HOO69_20955 PF13472 GDSL-like Lipase/Acylhydrolase family HOO69_20960 PF00005 ABC transporter HOO69_20975 PF02626 Carboxyltransferase domain, subdomain A and B HOO69_20985 PF03746 LamB/YcsF family HOO69_20990 PF00563 EAL domain HOO69_20990 PF00990 Diguanylate cyclase, GGDEF domain HOO69_20990 PF03707 Bacterial signalling protein N terminal repeat HOO69_20995 PF16363 GDP-mannose 4,6 dehydratase HOO69_21005 PF03264 NapC/NirT cytochrome c family, N-terminal region HOO69_21010 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) HOO69_21015 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HOO69_21015 PF01568 Molydopterin dinucleotide binding domain HOO69_21015 PF00384 Molybdopterin oxidoreductase HOO69_21025 PF00037 4Fe-4S binding domain HOO69_21025 PF12800 4Fe-4S binding domain HOO69_21025 PF13187 4Fe-4S dicluster domain HOO69_21030 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HOO69_21030 PF07730 Histidine kinase HOO69_21030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_21030 PF00672 HAMP domain HOO69_21035 PF00196 Bacterial regulatory proteins, luxR family HOO69_21035 PF00072 Response regulator receiver domain HOO69_21040 PF03606 C4-dicarboxylate anaerobic carrier HOO69_21065 PF01292 Prokaryotic cytochrome b561 HOO69_21070 PF04264 YceI-like domain HOO69_21075 PF01226 Formate/nitrite transporter HOO69_21080 PF03466 LysR substrate binding domain HOO69_21080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_21085 PF06496 Protein of unknown function (DUF1097) HOO69_21090 PF11398 Protein of unknown function (DUF2813) HOO69_21095 PF02872 5'-nucleotidase, C-terminal domain HOO69_21095 PF00149 Calcineurin-like phosphoesterase HOO69_21100 PF03741 Integral membrane protein TerC family HOO69_21115 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HOO69_21115 PF18494 Pullulanase Ins domain HOO69_21115 PF11852 Domain of unknown function (DUF3372) HOO69_21115 PF03714 Bacterial pullanase-associated domain HOO69_21115 PF17967 Pullulanase N2 domain HOO69_21125 PF02163 Peptidase family M50 HOO69_21125 PF17820 PDZ domain HOO69_21130 PF01435 Peptidase family M48 HOO69_21135 PF03061 Thioesterase superfamily HOO69_21145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HOO69_21145 PF12793 Sugar transport-related sRNA regulator N-term HOO69_21155 PF07715 TonB-dependent Receptor Plug Domain HOO69_21155 PF00593 TonB dependent receptor HOO69_21155 PF04886 PT repeat HOO69_21160 PF03466 LysR substrate binding domain HOO69_21160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_21170 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HOO69_21170 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HOO69_21175 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HOO69_21180 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HOO69_21180 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HOO69_21190 PF01966 HD domain HOO69_21215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_21215 PF03466 LysR substrate binding domain HOO69_21220 PF00155 Aminotransferase class I and II HOO69_21225 PF08240 Alcohol dehydrogenase GroES-like domain HOO69_21225 PF00107 Zinc-binding dehydrogenase HOO69_21245 PF00194 Eukaryotic-type carbonic anhydrase HOO69_21260 PF07670 Nucleoside recognition HOO69_21260 PF01773 Na+ dependent nucleoside transporter N-terminus HOO69_21260 PF07662 Na+ dependent nucleoside transporter C-terminus HOO69_21285 PF00563 EAL domain HOO69_21285 PF00990 Diguanylate cyclase, GGDEF domain HOO69_21285 PF00498 FHA domain HOO69_21290 PF01758 Sodium Bile acid symporter family HOO69_21300 PF00583 Acetyltransferase (GNAT) family HOO69_21300 PF13380 CoA binding domain HOO69_21300 PF13607 Succinyl-CoA ligase like flavodoxin domain HOO69_21310 PF07478 D-ala D-ala ligase C-terminus HOO69_21310 PF01820 D-ala D-ala ligase N-terminus HOO69_21325 PF01253 Translation initiation factor SUI1 HOO69_21485 PF03701 Uncharacterised protein family (UPF0181) HOO69_21500 PF00072 Response regulator receiver domain HOO69_21500 PF00486 Transcriptional regulatory protein, C terminal HOO69_21510 PF02233 NAD(P) transhydrogenase beta subunit HOO69_21515 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HOO69_21515 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HOO69_21515 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HOO69_21530 PF00990 Diguanylate cyclase, GGDEF domain HOO69_21530 PF07694 5TMR of 5TMR-LYT HOO69_21535 PF01590 GAF domain HOO69_21535 PF00563 EAL domain HOO69_21535 PF00990 Diguanylate cyclase, GGDEF domain HOO69_21535 PF00360 Phytochrome region HOO69_21545 PF03459 TOBE domain HOO69_21545 PF00005 ABC transporter HOO69_21550 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_21560 PF07685 CobB/CobQ-like glutamine amidotransferase domain HOO69_21560 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HOO69_21565 PF04076 Bacterial OB fold (BOF) protein HOO69_21575 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HOO69_21575 PF00356 Bacterial regulatory proteins, lacI family HOO69_21580 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HOO69_21580 PF00381 PTS HPr component phosphorylation site HOO69_21585 PF00294 pfkB family carbohydrate kinase HOO69_21590 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HOO69_21590 PF02378 Phosphotransferase system, EIIC HOO69_21595 PF05230 MASE2 domain HOO69_21595 PF00990 Diguanylate cyclase, GGDEF domain HOO69_21600 PF00483 Nucleotidyl transferase HOO69_21605 PF06483 Chitinase C HOO69_21605 PF00704 Glycosyl hydrolases family 18 HOO69_21610 PF12833 Helix-turn-helix domain HOO69_21610 PF06719 AraC-type transcriptional regulator N-terminus HOO69_21615 PF00465 Iron-containing alcohol dehydrogenase HOO69_21630 PF01627 Hpt domain HOO69_21630 PF00512 His Kinase A (phospho-acceptor) domain HOO69_21630 PF00072 Response regulator receiver domain HOO69_21630 PF00672 HAMP domain HOO69_21630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_21635 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HOO69_21640 PF02142 MGS-like domain HOO69_21650 PF13419 Haloacid dehalogenase-like hydrolase HOO69_21665 PF00294 pfkB family carbohydrate kinase HOO69_21670 PF13419 Haloacid dehalogenase-like hydrolase HOO69_21675 PF12729 Four helix bundle sensory module for signal transduction HOO69_21675 PF00672 HAMP domain HOO69_21675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_21685 PF00873 AcrB/AcrD/AcrF family HOO69_21690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HOO69_21695 PF00583 Acetyltransferase (GNAT) family HOO69_21695 PF00814 Glycoprotease family HOO69_21715 PF00270 DEAD/DEAH box helicase HOO69_21715 PF00271 Helicase conserved C-terminal domain HOO69_21720 PF04336 Acyl carrier protein phosphodiesterase HOO69_21725 PF03222 Tryptophan/tyrosine permease family HOO69_21730 PF01641 SelR domain HOO69_21730 PF01625 Peptide methionine sulfoxide reductase HOO69_21745 PF00270 DEAD/DEAH box helicase HOO69_21745 PF00271 Helicase conserved C-terminal domain HOO69_21745 PF03880 DbpA RNA binding domain HOO69_21750 PF01227 GTP cyclohydrolase I HOO69_21755 PF03454 MoeA C-terminal region (domain IV) HOO69_21755 PF00994 Probable molybdopterin binding domain HOO69_21755 PF03453 MoeA N-terminal region (domain I and II) HOO69_21760 PF00899 ThiF family HOO69_21770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_21770 PF00672 HAMP domain HOO69_21775 PF00581 Rhodanese-like domain HOO69_21815 PF00437 Type II/IV secretion system protein HOO69_21830 PF04972 BON domain HOO69_21830 PF00263 Bacterial type II and III secretion system protein HOO69_21830 PF13629 Pilus formation protein N terminal region HOO69_21850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_21850 PF03466 LysR substrate binding domain HOO69_21865 PF03466 LysR substrate binding domain HOO69_21865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_21875 PF00923 Transaldolase/Fructose-6-phosphate aldolase HOO69_21880 PF02779 Transketolase, pyrimidine binding domain HOO69_21880 PF02780 Transketolase, C-terminal domain HOO69_21880 PF00456 Transketolase, thiamine diphosphate binding domain HOO69_21885 PF01037 Lrp/AsnC ligand binding domain HOO69_21890 PF07670 Nucleoside recognition HOO69_21900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_21900 PF17200 Single Cache domain 2 HOO69_21900 PF00672 HAMP domain HOO69_21910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HOO69_21910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HOO69_21915 PF13654 AAA domain HOO69_21915 PF05362 Lon protease (S16) C-terminal proteolytic domain HOO69_21925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HOO69_21925 PF00005 ABC transporter HOO69_21935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_21935 PF03466 LysR substrate binding domain HOO69_21940 PF02652 L-lactate permease HOO69_21945 PF01070 FMN-dependent dehydrogenase HOO69_21950 PF02567 Phenazine biosynthesis-like protein HOO69_21965 PF01451 Low molecular weight phosphotyrosine protein phosphatase HOO69_21990 PF03808 Glycosyl transferase WecB/TagA/CpsF family HOO69_22005 PF00535 Glycosyl transferase family 2 HOO69_22015 PF13807 G-rich domain on putative tyrosine kinase HOO69_22015 PF02706 Chain length determinant protein HOO69_22015 PF13614 AAA domain HOO69_22030 PF02397 Bacterial sugar transferase HOO69_22050 PF00158 Sigma-54 interaction domain HOO69_22050 PF02954 Bacterial regulatory protein, Fis family HOO69_22050 PF01590 GAF domain HOO69_22055 PF00171 Aldehyde dehydrogenase family HOO69_22090 PF00486 Transcriptional regulatory protein, C terminal HOO69_22090 PF00072 Response regulator receiver domain HOO69_22095 PF13493 Domain of unknown function (DUF4118) HOO69_22095 PF02702 Osmosensitive K+ channel His kinase sensor domain HOO69_22095 PF00512 His Kinase A (phospho-acceptor) domain HOO69_22095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_22100 PF00367 phosphotransferase system, EIIB HOO69_22100 PF02378 Phosphotransferase system, EIIC HOO69_22105 PF00005 ABC transporter HOO69_22105 PF00571 CBS domain HOO69_22110 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_22115 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HOO69_22120 PF05199 GMC oxidoreductase HOO69_22120 PF00732 GMC oxidoreductase HOO69_22125 PF00171 Aldehyde dehydrogenase family HOO69_22130 PF13977 BetI-type transcriptional repressor, C-terminal HOO69_22130 PF00440 Bacterial regulatory proteins, tetR family HOO69_22135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_22135 PF00512 His Kinase A (phospho-acceptor) domain HOO69_22135 PF01627 Hpt domain HOO69_22135 PF00072 Response regulator receiver domain HOO69_22135 PF00672 HAMP domain HOO69_22135 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HOO69_22140 PF00072 Response regulator receiver domain HOO69_22150 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) HOO69_22160 PF00593 TonB dependent receptor HOO69_22160 PF07715 TonB-dependent Receptor Plug Domain HOO69_22165 PF00501 AMP-binding enzyme HOO69_22165 PF13193 AMP-binding enzyme C-terminal domain HOO69_22165 PF00668 Condensation domain HOO69_22165 PF00550 Phosphopantetheine attachment site HOO69_22170 PF00668 Condensation domain HOO69_22170 PF13193 AMP-binding enzyme C-terminal domain HOO69_22170 PF00501 AMP-binding enzyme HOO69_22170 PF00550 Phosphopantetheine attachment site HOO69_22175 PF03621 MbtH-like protein HOO69_22180 PF00005 ABC transporter HOO69_22185 PF01032 FecCD transport family HOO69_22190 PF01497 Periplasmic binding protein HOO69_22195 PF00005 ABC transporter HOO69_22235 PF00005 ABC transporter HOO69_22240 PF00950 ABC 3 transport family HOO69_22250 PF00593 TonB dependent receptor HOO69_22250 PF07715 TonB-dependent Receptor Plug Domain HOO69_22280 PF00478 IMP dehydrogenase / GMP reductase domain HOO69_22295 PF00478 IMP dehydrogenase / GMP reductase domain HOO69_22300 PF00672 HAMP domain HOO69_22300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_22305 PF13609 Gram-negative porin HOO69_22310 PF01037 Lrp/AsnC ligand binding domain HOO69_22315 PF01810 LysE type translocator HOO69_22320 PF08021 Siderophore-interacting FAD-binding domain HOO69_22320 PF04954 Siderophore-interacting protein HOO69_22325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_22325 PF03466 LysR substrate binding domain HOO69_22335 PF00849 RNA pseudouridylate synthase HOO69_22360 PF00270 DEAD/DEAH box helicase HOO69_22360 PF00271 Helicase conserved C-terminal domain HOO69_22370 PF00990 Diguanylate cyclase, GGDEF domain HOO69_22370 PF17158 Membrane-associated sensor, integral membrane domain HOO69_22375 PF16925 Tetracyclin repressor-like, C-terminal domain HOO69_22375 PF00440 Bacterial regulatory proteins, tetR family HOO69_22380 PF00107 Zinc-binding dehydrogenase HOO69_22380 PF16884 N-terminal domain of oxidoreductase HOO69_22390 PF00141 Peroxidase HOO69_22395 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HOO69_22395 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HOO69_22410 PF00128 Alpha amylase, catalytic domain HOO69_22415 PF13419 Haloacid dehalogenase-like hydrolase HOO69_22420 PF02798 Glutathione S-transferase, N-terminal domain HOO69_22430 PF00206 Lyase HOO69_22430 PF10415 Fumarase C C-terminus HOO69_22450 PF00563 EAL domain HOO69_22450 PF00990 Diguanylate cyclase, GGDEF domain HOO69_22450 PF03707 Bacterial signalling protein N terminal repeat HOO69_22460 PF00072 Response regulator receiver domain HOO69_22460 PF00486 Transcriptional regulatory protein, C terminal HOO69_22480 PF13977 BetI-type transcriptional repressor, C-terminal HOO69_22480 PF00440 Bacterial regulatory proteins, tetR family HOO69_22490 PF00873 AcrB/AcrD/AcrF family HOO69_22495 PF00873 AcrB/AcrD/AcrF family HOO69_22515 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HOO69_22520 PF00563 EAL domain HOO69_22520 PF00990 Diguanylate cyclase, GGDEF domain HOO69_22520 PF13188 PAS domain HOO69_22520 PF03707 Bacterial signalling protein N terminal repeat HOO69_22540 PF03116 NQR2, RnfD, RnfE family HOO69_22545 PF01654 Cytochrome bd terminal oxidase subunit I HOO69_22550 PF02322 Cytochrome bd terminal oxidase subunit II HOO69_22595 PF07963 Prokaryotic N-terminal methylation motif HOO69_22595 PF00114 Pilin (bacterial filament) HOO69_22600 PF01297 Zinc-uptake complex component A periplasmic HOO69_22615 PF13599 Pentapeptide repeats (9 copies) HOO69_22620 PF01625 Peptide methionine sulfoxide reductase HOO69_22620 PF01641 SelR domain HOO69_22630 PF02469 Fasciclin domain HOO69_22640 PF09278 MerR, DNA binding HOO69_22640 PF00376 MerR family regulatory protein HOO69_22665 PF00672 HAMP domain HOO69_22665 PF02743 Cache domain HOO69_22665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_22670 PF00012 Hsp70 protein HOO69_22675 PF03466 LysR substrate binding domain HOO69_22675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_22685 PF13378 Enolase C-terminal domain-like HOO69_22685 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HOO69_22700 PF16657 Maltogenic Amylase, C-terminal domain HOO69_22700 PF00128 Alpha amylase, catalytic domain HOO69_22700 PF02903 Alpha amylase, N-terminal ig-like domain HOO69_22705 PF02903 Alpha amylase, N-terminal ig-like domain HOO69_22705 PF00128 Alpha amylase, catalytic domain HOO69_22710 PF01547 Bacterial extracellular solute-binding protein HOO69_22715 PF03466 LysR substrate binding domain HOO69_22715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_22720 PF16657 Maltogenic Amylase, C-terminal domain HOO69_22720 PF00128 Alpha amylase, catalytic domain HOO69_22730 PF04397 LytTr DNA-binding domain HOO69_22730 PF00072 Response regulator receiver domain HOO69_22735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_22735 PF06580 Histidine kinase HOO69_22735 PF13492 GAF domain HOO69_22735 PF07694 5TMR of 5TMR-LYT HOO69_22750 PF02687 FtsX-like permease family HOO69_22750 PF12704 MacB-like periplasmic core domain HOO69_22755 PF00005 ABC transporter HOO69_22770 PF01042 Endoribonuclease L-PSP HOO69_22775 PF07549 SecD/SecF GG Motif HOO69_22775 PF02355 Protein export membrane protein HOO69_22780 PF07549 SecD/SecF GG Motif HOO69_22780 PF02355 Protein export membrane protein HOO69_22780 PF13721 SecD export protein N-terminal TM region HOO69_22810 PF03707 Bacterial signalling protein N terminal repeat HOO69_22810 PF00563 EAL domain HOO69_22810 PF00990 Diguanylate cyclase, GGDEF domain HOO69_22820 PF01329 Pterin 4 alpha carbinolamine dehydratase HOO69_22825 PF00351 Biopterin-dependent aromatic amino acid hydroxylase HOO69_22830 PF13193 AMP-binding enzyme C-terminal domain HOO69_22830 PF00501 AMP-binding enzyme HOO69_22835 PF08241 Methyltransferase domain HOO69_22840 PF03466 LysR substrate binding domain HOO69_22840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_22850 PF02567 Phenazine biosynthesis-like protein HOO69_22865 PF00293 NUDIX domain HOO69_22865 PF09297 NADH pyrophosphatase zinc ribbon domain HOO69_22870 PF13649 Methyltransferase domain HOO69_22895 PF01632 Ribosomal protein L35 HOO69_22900 PF00707 Translation initiation factor IF-3, C-terminal domain HOO69_22900 PF05198 Translation initiation factor IF-3, N-terminal domain HOO69_22905 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HOO69_22905 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HOO69_22905 PF02824 TGS domain HOO69_22905 PF03129 Anticodon binding domain HOO69_22910 PF03853 YjeF-related protein N-terminus HOO69_22910 PF01256 Carbohydrate kinase HOO69_22920 PF00072 Response regulator receiver domain HOO69_22920 PF00486 Transcriptional regulatory protein, C terminal HOO69_22925 PF00072 Response regulator receiver domain HOO69_22930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_22930 PF00672 HAMP domain HOO69_22930 PF01627 Hpt domain HOO69_22930 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HOO69_22930 PF00512 His Kinase A (phospho-acceptor) domain HOO69_22930 PF00072 Response regulator receiver domain HOO69_22940 PF13581 Histidine kinase-like ATPase domain HOO69_22950 PF01740 STAS domain HOO69_22950 PF08678 Rsbr N terminal HOO69_22955 PF08447 PAS fold HOO69_22955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_22995 PF00155 Aminotransferase class I and II HOO69_22995 PF00392 Bacterial regulatory proteins, gntR family HOO69_23005 PF01923 Cobalamin adenosyltransferase HOO69_23010 PF01243 Pyridoxamine 5'-phosphate oxidase HOO69_23015 PF06228 Haem utilisation ChuX/HutX HOO69_23025 PF03544 Gram-negative bacterial TonB protein C-terminal HOO69_23030 PF01618 MotA/TolQ/ExbB proton channel family HOO69_23035 PF02472 Biopolymer transport protein ExbD/TolR HOO69_23045 PF01032 FecCD transport family HOO69_23050 PF00005 ABC transporter HOO69_23065 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HOO69_23065 PF02896 PEP-utilising enzyme, TIM barrel domain HOO69_23065 PF00391 PEP-utilising enzyme, mobile domain HOO69_23070 PF03922 OmpW family HOO69_23075 PF01551 Peptidase family M23 HOO69_23075 PF01476 LysM domain HOO69_23075 PF08525 Opacity-associated protein A N-terminal motif HOO69_23110 PF13185 GAF domain HOO69_23110 PF00990 Diguanylate cyclase, GGDEF domain HOO69_23115 PF03783 Curli production assembly/transport component CsgG HOO69_23145 PF00005 ABC transporter HOO69_23150 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_23155 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_23160 PF12849 PBP superfamily domain HOO69_23165 PF00672 HAMP domain HOO69_23165 PF02743 Cache domain HOO69_23165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_23170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HOO69_23170 PF18029 Glyoxalase-like domain HOO69_23180 PF00072 Response regulator receiver domain HOO69_23180 PF01584 CheW-like domain HOO69_23190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_23190 PF00497 Bacterial extracellular solute-binding proteins, family 3 HOO69_23190 PF00512 His Kinase A (phospho-acceptor) domain HOO69_23195 PF11849 Domain of unknown function (DUF3369) HOO69_23200 PF00356 Bacterial regulatory proteins, lacI family HOO69_23205 PF00294 pfkB family carbohydrate kinase HOO69_23210 PF13407 Periplasmic binding protein domain HOO69_23215 PF02653 Branched-chain amino acid transport system / permease component HOO69_23220 PF00005 ABC transporter HOO69_23225 PF05025 RbsD / FucU transport protein family HOO69_23235 PF00909 Ammonium Transporter Family HOO69_23240 PF00196 Bacterial regulatory proteins, luxR family HOO69_23255 PF01571 Aminomethyltransferase folate-binding domain HOO69_23255 PF08669 Glycine cleavage T-protein C-terminal barrel domain HOO69_23265 PF00464 Serine hydroxymethyltransferase HOO69_23270 PF01597 Glycine cleavage H-protein HOO69_23275 PF02347 Glycine cleavage system P-protein HOO69_23285 PF01809 Putative membrane protein insertion efficiency factor HOO69_23305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_23305 PF00497 Bacterial extracellular solute-binding proteins, family 3 HOO69_23305 PF00512 His Kinase A (phospho-acceptor) domain HOO69_23325 PF01810 LysE type translocator HOO69_23330 PF01381 Helix-turn-helix HOO69_23330 PF07883 Cupin domain HOO69_23340 PF01810 LysE type translocator HOO69_23345 PF00892 EamA-like transporter family HOO69_23350 PF05638 Type VI secretion system effector, Hcp HOO69_23355 PF16671 Actin cross-linking domain HOO69_23355 PF04717 Type VI secretion system, phage-baseplate injector HOO69_23400 PF01575 MaoC like domain HOO69_23415 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HOO69_23415 PF00356 Bacterial regulatory proteins, lacI family HOO69_23420 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HOO69_23420 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HOO69_23425 PF01202 Shikimate kinase HOO69_23430 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HOO69_23435 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HOO69_23440 PF03480 Bacterial extracellular solute-binding protein, family 7 HOO69_23450 PF00990 Diguanylate cyclase, GGDEF domain HOO69_23450 PF03707 Bacterial signalling protein N terminal repeat HOO69_23450 PF00563 EAL domain HOO69_23465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_23465 PF03466 LysR substrate binding domain HOO69_23470 PF00990 Diguanylate cyclase, GGDEF domain HOO69_23470 PF03707 Bacterial signalling protein N terminal repeat HOO69_23470 PF00563 EAL domain HOO69_23480 PF04055 Radical SAM superfamily HOO69_23480 PF02310 B12 binding domain HOO69_23500 PF00924 Mechanosensitive ion channel HOO69_23505 PF07690 Major Facilitator Superfamily HOO69_23520 PF00128 Alpha amylase, catalytic domain HOO69_23575 PF02954 Bacterial regulatory protein, Fis family HOO69_23575 PF00072 Response regulator receiver domain HOO69_23575 PF00158 Sigma-54 interaction domain HOO69_23580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_23580 PF00072 Response regulator receiver domain HOO69_23580 PF13426 PAS domain HOO69_23585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_23585 PF13188 PAS domain HOO69_23585 PF00072 Response regulator receiver domain HOO69_23585 PF00512 His Kinase A (phospho-acceptor) domain HOO69_23585 PF08448 PAS fold HOO69_23595 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HOO69_23610 PF00583 Acetyltransferase (GNAT) family HOO69_23610 PF13673 Acetyltransferase (GNAT) domain HOO69_23615 PF13411 MerR HTH family regulatory protein HOO69_23630 PF00990 Diguanylate cyclase, GGDEF domain HOO69_23630 PF00072 Response regulator receiver domain HOO69_23650 PF00892 EamA-like transporter family HOO69_23655 PF03466 LysR substrate binding domain HOO69_23655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_23685 PF00990 Diguanylate cyclase, GGDEF domain HOO69_23685 PF17158 Membrane-associated sensor, integral membrane domain HOO69_23690 PF16326 ABC transporter C-terminal domain HOO69_23690 PF00005 ABC transporter HOO69_23690 PF12848 ABC transporter HOO69_23695 PF12837 4Fe-4S binding domain HOO69_23695 PF12801 4Fe-4S binding domain HOO69_23700 PF12838 4Fe-4S dicluster domain HOO69_23700 PF12800 4Fe-4S binding domain HOO69_23705 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HOO69_23705 PF00384 Molybdopterin oxidoreductase HOO69_23705 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HOO69_23705 PF01568 Molydopterin dinucleotide binding domain HOO69_23705 PF12838 4Fe-4S dicluster domain HOO69_23750 PF04463 Protein of unknown function (DUF523) HOO69_23760 PF01928 CYTH domain HOO69_23775 PF02803 Thiolase, C-terminal domain HOO69_23775 PF00108 Thiolase, N-terminal domain HOO69_23785 PF01144 Coenzyme A transferase HOO69_23790 PF03466 LysR substrate binding domain HOO69_23790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_23795 PF00196 Bacterial regulatory proteins, luxR family HOO69_23795 PF00072 Response regulator receiver domain HOO69_23800 PF17200 Single Cache domain 2 HOO69_23800 PF07730 Histidine kinase HOO69_23805 PF03480 Bacterial extracellular solute-binding protein, family 7 HOO69_23815 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HOO69_23830 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HOO69_23840 PF03466 LysR substrate binding domain HOO69_23840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_23845 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HOO69_23855 PF13188 PAS domain HOO69_23855 PF00990 Diguanylate cyclase, GGDEF domain HOO69_23855 PF00563 EAL domain HOO69_23855 PF03707 Bacterial signalling protein N terminal repeat HOO69_23860 PF00990 Diguanylate cyclase, GGDEF domain HOO69_23860 PF03707 Bacterial signalling protein N terminal repeat HOO69_23860 PF00563 EAL domain HOO69_23865 PF00512 His Kinase A (phospho-acceptor) domain HOO69_23865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_23870 PF07690 Major Facilitator Superfamily HOO69_23880 PF00701 Dihydrodipicolinate synthetase family HOO69_23885 PF02423 Ornithine cyclodeaminase/mu-crystallin family HOO69_23890 PF05690 Thiazole biosynthesis protein ThiG HOO69_23890 PF01266 FAD dependent oxidoreductase HOO69_23895 PF05544 Proline racemase HOO69_23900 PF00171 Aldehyde dehydrogenase family HOO69_23905 PF00144 Beta-lactamase HOO69_23910 PF02378 Phosphotransferase system, EIIC HOO69_23910 PF00367 phosphotransferase system, EIIB HOO69_23915 PF00072 Response regulator receiver domain HOO69_23915 PF00486 Transcriptional regulatory protein, C terminal HOO69_23920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_23920 PF00512 His Kinase A (phospho-acceptor) domain HOO69_23920 PF08521 Two-component sensor kinase N-terminal HOO69_23925 PF01547 Bacterial extracellular solute-binding protein HOO69_23930 PF01156 Inosine-uridine preferring nucleoside hydrolase HOO69_23935 PF08448 PAS fold HOO69_23935 PF00563 EAL domain HOO69_23935 PF00990 Diguanylate cyclase, GGDEF domain HOO69_23950 PF00392 Bacterial regulatory proteins, gntR family HOO69_23960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HOO69_23965 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_23970 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_23970 PF12911 N-terminal TM domain of oligopeptide transport permease C HOO69_23975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HOO69_23975 PF00005 ABC transporter HOO69_23980 PF00005 ABC transporter HOO69_23980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HOO69_23990 PF09905 DNA-binding protein VF530 HOO69_23995 PF00557 Metallopeptidase family M24 HOO69_24005 PF00579 tRNA synthetases class I (W and Y) HOO69_24020 PF03786 D-mannonate dehydratase (UxuA) HOO69_24025 PF07729 FCD domain HOO69_24025 PF00392 Bacterial regulatory proteins, gntR family HOO69_24030 PF03480 Bacterial extracellular solute-binding protein, family 7 HOO69_24035 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HOO69_24040 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HOO69_24045 PF01232 Mannitol dehydrogenase Rossmann domain HOO69_24045 PF08125 Mannitol dehydrogenase C-terminal domain HOO69_24050 PF02614 Glucuronate isomerase HOO69_24055 PF00294 pfkB family carbohydrate kinase HOO69_24060 PF01081 KDPG and KHG aldolase HOO69_24065 PF10688 Bacterial inner membrane protein HOO69_24070 PF00933 Glycosyl hydrolase family 3 N terminal domain HOO69_24105 PF01752 Collagenase HOO69_24105 PF04151 Bacterial pre-peptidase C-terminal domain HOO69_24105 PF08453 Peptidase family M9 N-terminal HOO69_24115 PF03372 Endonuclease/Exonuclease/phosphatase family HOO69_24120 PF01752 Collagenase HOO69_24120 PF08453 Peptidase family M9 N-terminal HOO69_24130 PF00106 short chain dehydrogenase HOO69_24150 PF00892 EamA-like transporter family HOO69_24155 PF03466 LysR substrate binding domain HOO69_24155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_24160 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HOO69_24165 PF01810 LysE type translocator HOO69_24170 PF13091 PLD-like domain HOO69_24175 PF00375 Sodium:dicarboxylate symporter family HOO69_24180 PF00563 EAL domain HOO69_24180 PF05231 MASE1 HOO69_24190 PF04820 Tryptophan halogenase HOO69_24215 PF00550 Phosphopantetheine attachment site HOO69_24220 PF00550 Phosphopantetheine attachment site HOO69_24230 PF00501 AMP-binding enzyme HOO69_24230 PF13193 AMP-binding enzyme C-terminal domain HOO69_24245 PF00221 Aromatic amino acid lyase HOO69_24270 PF02801 Beta-ketoacyl synthase, C-terminal domain HOO69_24270 PF00109 Beta-ketoacyl synthase, N-terminal domain HOO69_24275 PF07977 FabA-like domain HOO69_24285 PF00109 Beta-ketoacyl synthase, N-terminal domain HOO69_24285 PF02801 Beta-ketoacyl synthase, C-terminal domain HOO69_24290 PF00150 Cellulase (glycosyl hydrolase family 5) HOO69_24290 PF14600 Cellulose-binding domain HOO69_24300 PF00313 'Cold-shock' DNA-binding domain HOO69_24305 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) HOO69_24310 PF17944 Arginine decarboxylase C-terminal helical extension HOO69_24310 PF17810 Arginine decarboxylase helical bundle domain HOO69_24310 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HOO69_24315 PF00491 Arginase family HOO69_24320 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HOO69_24320 PF12833 Helix-turn-helix domain HOO69_24330 PF04116 Fatty acid hydroxylase superfamily HOO69_24340 PF04151 Bacterial pre-peptidase C-terminal domain HOO69_24340 PF02868 Thermolysin metallopeptidase, alpha-helical domain HOO69_24340 PF01447 Thermolysin metallopeptidase, catalytic domain HOO69_24340 PF03413 Peptidase propeptide and YPEB domain HOO69_24340 PF07504 Fungalysin/Thermolysin Propeptide Motif HOO69_24345 PF00672 HAMP domain HOO69_24345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_24350 PF00392 Bacterial regulatory proteins, gntR family HOO69_24350 PF07729 FCD domain HOO69_24355 PF03450 CO dehydrogenase flavoprotein C-terminal domain HOO69_24355 PF00941 FAD binding domain in molybdopterin dehydrogenase HOO69_24370 PF01979 Amidohydrolase family HOO69_24375 PF00497 Bacterial extracellular solute-binding proteins, family 3 HOO69_24380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_24380 PF00672 HAMP domain HOO69_24380 PF02743 Cache domain HOO69_24385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_24385 PF00512 His Kinase A (phospho-acceptor) domain HOO69_24385 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HOO69_24385 PF00072 Response regulator receiver domain HOO69_24385 PF01627 Hpt domain HOO69_24385 PF00672 HAMP domain HOO69_24400 PF02492 CobW/HypB/UreG, nucleotide-binding domain HOO69_24405 PF01730 UreF HOO69_24415 PF02814 UreE urease accessory protein, N-terminal domain HOO69_24415 PF05194 UreE urease accessory protein, C-terminal domain HOO69_24420 PF00449 Urease alpha-subunit, N-terminal domain HOO69_24420 PF01979 Amidohydrolase family HOO69_24425 PF00699 Urease beta subunit HOO69_24430 PF00547 Urease, gamma subunit HOO69_24435 PF01774 UreD urease accessory protein HOO69_24440 PF00005 ABC transporter HOO69_24445 PF12399 Branched-chain amino acid ATP-binding cassette transporter HOO69_24445 PF00005 ABC transporter HOO69_24455 PF02653 Branched-chain amino acid transport system / permease component HOO69_24465 PF04151 Bacterial pre-peptidase C-terminal domain HOO69_24465 PF00082 Subtilase family HOO69_24465 PF05922 Peptidase inhibitor I9 HOO69_24475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_24475 PF02743 Cache domain HOO69_24475 PF00672 HAMP domain HOO69_24485 PF04115 Ureidoglycolate lyase HOO69_24490 PF03561 Allantoicase repeat HOO69_24495 PF01014 Uricase HOO69_24495 PF09349 OHCU decarboxylase HOO69_24505 PF00576 HIUase/Transthyretin family HOO69_24510 PF00860 Permease family HOO69_24515 PF00860 Permease family HOO69_24520 PF01979 Amidohydrolase family HOO69_24530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_24530 PF03466 LysR substrate binding domain HOO69_24540 PF00561 alpha/beta hydrolase fold HOO69_24565 PF03611 PTS system sugar-specific permease component HOO69_24575 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HOO69_24580 PF00356 Bacterial regulatory proteins, lacI family HOO69_24585 PF03466 LysR substrate binding domain HOO69_24585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_24590 PF01810 LysE type translocator HOO69_24605 PF02028 BCCT, betaine/carnitine/choline family transporter HOO69_24615 PF00171 Aldehyde dehydrogenase family HOO69_24630 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HOO69_24635 PF01238 Phosphomannose isomerase type I HOO69_24640 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HOO69_24640 PF02378 Phosphotransferase system, EIIC HOO69_24640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HOO69_24645 PF00128 Alpha amylase, catalytic domain HOO69_24650 PF07748 Glycosyl hydrolases family 38 C-terminal domain HOO69_24650 PF09261 Alpha mannosidase middle domain HOO69_24650 PF01074 Glycosyl hydrolases family 38 N-terminal domain HOO69_24655 PF02378 Phosphotransferase system, EIIC HOO69_24655 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HOO69_24655 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HOO69_24660 PF01380 SIS domain HOO69_24660 PF01418 Helix-turn-helix domain, rpiR family HOO69_24665 PF00892 EamA-like transporter family HOO69_24675 PF00581 Rhodanese-like domain HOO69_24680 PF04794 YdjC-like protein HOO69_24700 PF04273 Putative phosphatase (DUF442) HOO69_24700 PF00753 Metallo-beta-lactamase superfamily HOO69_24715 PF11953 Domain of unknown function (DUF3470) HOO69_24715 PF00037 4Fe-4S binding domain HOO69_24725 PF01638 HxlR-like helix-turn-helix HOO69_24735 PF13673 Acetyltransferase (GNAT) domain HOO69_24740 PF08032 RNA 2'-O ribose methyltransferase substrate binding HOO69_24740 PF00588 SpoU rRNA Methylase family HOO69_24755 PF01966 HD domain HOO69_24765 PF03466 LysR substrate binding domain HOO69_24765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_24770 PF07690 Major Facilitator Superfamily HOO69_24790 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_24795 PF00528 Binding-protein-dependent transport system inner membrane component HOO69_24800 PF00005 ABC transporter HOO69_24830 PF00072 Response regulator receiver domain HOO69_24830 PF00158 Sigma-54 interaction domain HOO69_24830 PF02954 Bacterial regulatory protein, Fis family HOO69_24835 PF00512 His Kinase A (phospho-acceptor) domain HOO69_24835 PF02743 Cache domain HOO69_24835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_24850 PF01327 Polypeptide deformylase HOO69_24860 PF00561 alpha/beta hydrolase fold HOO69_24865 PF03466 LysR substrate binding domain HOO69_24865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO69_24870 PF02386 Cation transport protein HOO69_24875 PF02080 TrkA-C domain HOO69_24875 PF02254 TrkA-N domain HOO69_24880 PF00072 Response regulator receiver domain HOO69_24880 PF00486 Transcriptional regulatory protein, C terminal HOO69_24885 PF07689 KaiB domain HOO69_24885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO69_24885 PF00512 His Kinase A (phospho-acceptor) domain HOO69_24890 PF00672 HAMP domain HOO69_24890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO69_24905 PF10282 Lactonase, 7-bladed beta-propeller HOO69_24910 PF00728 Glycosyl hydrolase family 20, catalytic domain HOO69_24910 PF02838 Glycosyl hydrolase family 20, domain 2 HOO69_24915 PF01081 KDPG and KHG aldolase HOO69_24920 PF00294 pfkB family carbohydrate kinase HOO69_24925 PF00474 Sodium:solute symporter family HOO69_24935 PF07969 Amidohydrolase family HOO69_24945 PF01380 SIS domain HOO69_24945 PF01418 Helix-turn-helix domain, rpiR family HOO69_24945 PF02685 Glucokinase HOO69_24955 PF00005 ABC transporter HOO69_24960 PF00392 Bacterial regulatory proteins, gntR family HOO69_24960 PF07702 UTRA domain HOO69_24970 PF01116 Fructose-bisphosphate aldolase class-II HOO69_24975 PF01979 Amidohydrolase family HOO69_24980 PF03610 PTS system fructose IIA component HOO69_24985 PF03613 PTS system mannose/fructose/sorbose family IID component HOO69_24990 PF03609 PTS system sorbose-specific iic component HOO69_24995 PF03830 PTS system sorbose subfamily IIB component HOO69_25000 PF01380 SIS domain HOO69_25005 PF08013 Tagatose 6 phosphate kinase HOO69_25010 PF00455 DeoR C terminal sensor domain HOO69_25010 PF08220 DeoR-like helix-turn-helix domain HOO69_25015 PF00455 DeoR C terminal sensor domain HOO69_25015 PF08220 DeoR-like helix-turn-helix domain HOO69_25030 PF00005 ABC transporter HOO69_25060 PF02311 AraC-like ligand binding domain HOO69_25060 PF12833 Helix-turn-helix domain HOO69_25065 PF07992 Pyridine nucleotide-disulphide oxidoreductase HOO69_25065 PF18113 Rubredoxin binding C-terminal domain HOO69_25070 PF00753 Metallo-beta-lactamase superfamily HOO69_25070 PF00301 Rubredoxin HOO69_25070 PF00258 Flavodoxin HOO69_25090 PF01965 DJ-1/PfpI family HOO69_25100 PF13840 ACT domain HOO69_25100 PF00696 Amino acid kinase family HOO69_25105 PF06339 Ectoine synthase HOO69_25110 PF00202 Aminotransferase class-III HOO69_25115 PF00583 Acetyltransferase (GNAT) family HOO69_25125 PF02311 AraC-like ligand binding domain HOO69_25125 PF12833 Helix-turn-helix domain HOO69_25130 PF01810 LysE type translocator HOO69_25135 PF01037 Lrp/AsnC ligand binding domain HOO69_25135 PF13404 AsnC-type helix-turn-helix domain HOO69_25145 PF03473 MOSC domain HOO69_25145 PF03475 3-alpha domain HOO69_25150 PF00356 Bacterial regulatory proteins, lacI family HOO69_25155 PF03553 Na+/H+ antiporter family HOO69_25160 PF00155 Aminotransferase class I and II HOO69_25165 PF00082 Subtilase family