AL536_00020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_00020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_00025 SM00344 helix_turn_helix ASNC type AL536_00040 SM00487 DEAD-like helicases superfamily AL536_00040 SM00490 helicase superfamily c-terminal domain AL536_00060 SM00347 helix_turn_helix multiple antibiotic resistance protein AL536_00065 SM00422 helix_turn_helix, mercury resistance AL536_00070 SM00360 RNA recognition motif AL536_00080 SM00344 helix_turn_helix ASNC type AL536_00095 SM01007 Class II Aldolase and Adducin N-terminal domain AL536_00110 SM00420 helix_turn_helix, Deoxyribose operon repressor AL536_00110 SM01134 AL536_00110 AL536_00115 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL536_00115 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_00140 SM00342 helix_turn_helix, arabinose operon control protein AL536_00150 SM00342 helix_turn_helix, arabinose operon control protein AL536_00155 SM00450 Rhodanese Homology Domain AL536_00190 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL536_00215 SM00507 HNH nucleases AL536_00220 SM00829 Enoylreductase AL536_00225 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL536_00230 SM00342 helix_turn_helix, arabinose operon control protein AL536_00280 SM00062 Bacterial periplasmic substrate-binding proteins AL536_00290 SM00479 AL536_00290 AL536_00390 SM01154 AL536_00390 AL536_00415 SM00342 helix_turn_helix, arabinose operon control protein AL536_00415 SM01009 AlkA N-terminal domain AL536_00455 SM00342 helix_turn_helix, arabinose operon control protein AL536_00480 SM00347 helix_turn_helix multiple antibiotic resistance protein AL536_00495 SM00347 helix_turn_helix multiple antibiotic resistance protein AL536_00515 SM00342 helix_turn_helix, arabinose operon control protein AL536_00605 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL536_00605 SM00267 diguanylate cyclase AL536_00625 SM00342 helix_turn_helix, arabinose operon control protein AL536_00645 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL536_00705 SM00342 helix_turn_helix, arabinose operon control protein AL536_00735 SM00342 helix_turn_helix, arabinose operon control protein AL536_00770 SM00382 ATPases associated with a variety of cellular activities AL536_00785 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_00785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_00830 SM00267 diguanylate cyclase AL536_00855 SM00267 diguanylate cyclase AL536_00855 SM01079 AL536_00855 AL536_00865 SM00530 Helix-turn-helix XRE-family like proteins AL536_00875 SM00267 diguanylate cyclase AL536_00885 SM00347 helix_turn_helix multiple antibiotic resistance protein AL536_00895 SM00260 Two component signalling adaptor domain AL536_00895 SM00448 cheY-homologous receiver domain AL536_00930 SM00342 helix_turn_helix, arabinose operon control protein AL536_00935 SM00917 LeuA allosteric (dimerisation) domain AL536_00955 SM00344 helix_turn_helix ASNC type AL536_00960 SM00421 helix_turn_helix, Lux Regulon AL536_00995 SM00382 ATPases associated with a variety of cellular activities AL536_01060 SM00346 helix_turn_helix isocitrate lyase regulation AL536_01065 SM00116 Domain in cystathionine beta-synthase and other proteins. AL536_01070 SM00479 AL536_01070 AL536_01075 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AL536_01095 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL536_01135 SM00382 ATPases associated with a variety of cellular activities AL536_01170 SM00421 helix_turn_helix, Lux Regulon AL536_01175 SM00420 helix_turn_helix, Deoxyribose operon repressor AL536_01175 SM01134 AL536_01175 AL536_01185 SM00342 helix_turn_helix, arabinose operon control protein AL536_01245 SM00382 ATPases associated with a variety of cellular activities AL536_01285 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_01285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_01295 SM00344 helix_turn_helix ASNC type AL536_01330 SM00052 Putative diguanylate phosphodiesterase AL536_01340 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL536_01355 SM00387 Histidine kinase-like ATPases AL536_01355 SM00388 His Kinase A (phosphoacceptor) domain AL536_01355 SM00448 cheY-homologous receiver domain AL536_01360 SM00052 Putative diguanylate phosphodiesterase AL536_01360 SM00267 diguanylate cyclase AL536_01385 SM01266 AL536_01385 AL536_01425 SM01236 AL536_01425 AL536_01440 SM00448 cheY-homologous receiver domain AL536_01440 SM00862 Transcriptional regulatory protein, C terminal AL536_01445 SM00387 Histidine kinase-like ATPases AL536_01445 SM00388 His Kinase A (phosphoacceptor) domain AL536_01475 SM00342 helix_turn_helix, arabinose operon control protein AL536_01485 SM00342 helix_turn_helix, arabinose operon control protein AL536_01485 SM00871 Bacterial transcription activator, effector binding domain AL536_01530 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL536_01535 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL536_01535 SM00267 diguanylate cyclase AL536_01540 SM01004 Delta-aminolevulinic acid dehydratase AL536_01550 SM00883 Chaperonin 10 Kd subunit AL536_01555 SM00924 MgtE intracellular N domain AL536_01565 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_01565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_01570 SM00347 helix_turn_helix multiple antibiotic resistance protein AL536_01585 SM00116 Domain in cystathionine beta-synthase and other proteins. AL536_01585 SM00382 ATPases associated with a variety of cellular activities AL536_01590 SM00028 Tetratricopeptide repeats AL536_01605 SM00344 helix_turn_helix ASNC type AL536_01615 SM00062 Bacterial periplasmic substrate-binding proteins AL536_01615 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL536_01625 SM00382 ATPases associated with a variety of cellular activities AL536_01630 SM00936 Penicillin-binding protein 5, C-terminal domain AL536_01655 SM01057 Eukaryotic-type carbonic anhydrase AL536_01695 SM00382 ATPases associated with a variety of cellular activities AL536_01715 SM00487 DEAD-like helicases superfamily AL536_01715 SM00490 helicase superfamily c-terminal domain AL536_01720 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL536_01720 SM00448 cheY-homologous receiver domain AL536_01725 SM00387 Histidine kinase-like ATPases AL536_01725 SM00388 His Kinase A (phosphoacceptor) domain AL536_01730 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_01800 SM00357 Cold shock protein domain AL536_01855 SM00530 Helix-turn-helix XRE-family like proteins AL536_01865 SM00020 Trypsin-like serine protease AL536_01870 SM00267 diguanylate cyclase AL536_01875 SM00052 Putative diguanylate phosphodiesterase AL536_01875 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL536_01875 SM00091 PAS domain AL536_01875 SM00267 diguanylate cyclase AL536_01915 SM00271 DnaJ molecular chaperone homology domain AL536_01925 SM00052 Putative diguanylate phosphodiesterase AL536_01925 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL536_01925 SM00267 diguanylate cyclase AL536_01940 SM00382 ATPases associated with a variety of cellular activities AL536_01955 SM00797 Allophanate hydrolase subunit 2 AL536_01960 SM00796 Allophanate hydrolase subunit 1 AL536_01970 SM00091 PAS domain AL536_01970 SM00267 diguanylate cyclase AL536_01970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_01980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_01995 SM00487 DEAD-like helicases superfamily AL536_01995 SM00490 helicase superfamily c-terminal domain AL536_02025 SM00382 ATPases associated with a variety of cellular activities AL536_02030 SM00327 von Willebrand factor (vWF) type A domain AL536_02050 SM00342 helix_turn_helix, arabinose operon control protein AL536_02060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_02065 SM00880 AL536_02065 AL536_02100 SM00342 helix_turn_helix, arabinose operon control protein AL536_02125 SM00244 prohibitin homologues AL536_02215 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL536_02215 SM00895 AL536_02215 AL536_02260 SM01005 Alanine racemase, C-terminal domain AL536_02265 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_02265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_02315 SM00862 Transcriptional regulatory protein, C terminal AL536_02565 SM01252 AL536_02565 AL536_02745 SM00387 Histidine kinase-like ATPases AL536_02745 SM00388 His Kinase A (phosphoacceptor) domain AL536_02745 SM00448 cheY-homologous receiver domain AL536_02780 SM00382 ATPases associated with a variety of cellular activities AL536_02800 SM00382 ATPases associated with a variety of cellular activities AL536_02805 SM00052 Putative diguanylate phosphodiesterase AL536_02805 SM00267 diguanylate cyclase AL536_02805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_02830 SM00327 von Willebrand factor (vWF) type A domain AL536_02845 SM00851 MGS-like domain AL536_02855 SM00387 Histidine kinase-like ATPases AL536_02855 SM00388 His Kinase A (phosphoacceptor) domain AL536_02855 SM00448 cheY-homologous receiver domain AL536_02875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_02875 SM00387 Histidine kinase-like ATPases AL536_02875 SM00388 His Kinase A (phosphoacceptor) domain AL536_02880 SM00448 cheY-homologous receiver domain AL536_02895 SM00342 helix_turn_helix, arabinose operon control protein AL536_02900 SM00495 Chitin-binding domain type 3 AL536_02900 SM00636 AL536_02900 AL536_02915 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL536_02915 SM00267 diguanylate cyclase AL536_02945 SM00822 AL536_02945 AL536_02985 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL536_03000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_03000 SM00387 Histidine kinase-like ATPases AL536_03005 SM00421 helix_turn_helix, Lux Regulon AL536_03005 SM00448 cheY-homologous receiver domain AL536_03030 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_03055 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_03060 SM00861 Transketolase, pyrimidine binding domain AL536_03075 SM00450 Rhodanese Homology Domain AL536_03085 SM00852 Probable molybdopterin binding domain AL536_03110 SM00342 helix_turn_helix, arabinose operon control protein AL536_03145 SM00357 Cold shock protein domain AL536_03170 SM00382 ATPases associated with a variety of cellular activities AL536_03180 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL536_03180 SM00866 AL536_03180 AL536_03190 SM00631 AL536_03190 AL536_03230 SM00382 ATPases associated with a variety of cellular activities AL536_03250 SM00387 Histidine kinase-like ATPases AL536_03250 SM00388 His Kinase A (phosphoacceptor) domain AL536_03250 SM00448 cheY-homologous receiver domain AL536_03255 SM00052 Putative diguanylate phosphodiesterase AL536_03255 SM00448 cheY-homologous receiver domain AL536_03260 SM00421 helix_turn_helix, Lux Regulon AL536_03260 SM00448 cheY-homologous receiver domain AL536_03265 SM00267 diguanylate cyclase AL536_03275 SM00421 helix_turn_helix, Lux Regulon AL536_03275 SM00448 cheY-homologous receiver domain AL536_03300 SM00990 AL536_03300 AL536_03330 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AL536_03350 SM00342 helix_turn_helix, arabinose operon control protein AL536_03380 SM00382 ATPases associated with a variety of cellular activities AL536_03420 SM00862 Transcriptional regulatory protein, C terminal AL536_03455 SM00342 helix_turn_helix, arabinose operon control protein AL536_03455 SM00871 Bacterial transcription activator, effector binding domain AL536_03480 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL536_03480 SM00895 AL536_03480 AL536_03490 SM00062 Bacterial periplasmic substrate-binding proteins AL536_03505 SM00382 ATPases associated with a variety of cellular activities AL536_03570 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AL536_03575 SM01092 CO dehydrogenase flavoprotein C-terminal domain AL536_03595 SM00382 ATPases associated with a variety of cellular activities AL536_03610 SM00267 diguanylate cyclase AL536_03620 SM00267 diguanylate cyclase AL536_03635 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AL536_03635 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AL536_03645 SM00387 Histidine kinase-like ATPases AL536_03645 SM00388 His Kinase A (phosphoacceptor) domain AL536_03650 SM00448 cheY-homologous receiver domain AL536_03650 SM00862 Transcriptional regulatory protein, C terminal AL536_03690 SM00881 CoA binding domain AL536_03730 SM00782 PhnA Zinc-Ribbon AL536_03765 SM00116 Domain in cystathionine beta-synthase and other proteins. AL536_03770 SM00867 YceI-like domain AL536_03795 SM00052 Putative diguanylate phosphodiesterase AL536_03800 SM00267 diguanylate cyclase AL536_03825 SM00387 Histidine kinase-like ATPases AL536_03825 SM00388 His Kinase A (phosphoacceptor) domain AL536_03830 SM00448 cheY-homologous receiver domain AL536_03830 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL536_03840 SM00342 helix_turn_helix, arabinose operon control protein AL536_03850 SM00477 DNA/RNA non-specific endonuclease AL536_03850 SM00892 DNA/RNA non-specific endonuclease AL536_03855 SM00528 Domain in histone-like proteins of HNS family AL536_03860 SM00052 Putative diguanylate phosphodiesterase AL536_03860 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL536_03865 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_03865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_03865 SM01049 AL536_03865 AL536_03905 SM00421 helix_turn_helix, Lux Regulon AL536_03935 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL536_03945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_03945 SM00387 Histidine kinase-like ATPases AL536_03950 SM00421 helix_turn_helix, Lux Regulon AL536_03950 SM00448 cheY-homologous receiver domain AL536_03960 SM00116 Domain in cystathionine beta-synthase and other proteins. AL536_03965 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_03980 SM00849 Metallo-beta-lactamase superfamily AL536_03985 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL536_03985 SM00382 ATPases associated with a variety of cellular activities AL536_04030 SM00354 helix_turn _helix lactose operon repressor AL536_04050 SM00382 ATPases associated with a variety of cellular activities AL536_04075 SM00354 helix_turn _helix lactose operon repressor AL536_04080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_04095 SM00342 helix_turn_helix, arabinose operon control protein AL536_04200 SM00833 Cobalamin synthesis protein cobW C-terminal domain AL536_04220 SM00387 Histidine kinase-like ATPases AL536_04220 SM00448 cheY-homologous receiver domain AL536_04235 SM00354 helix_turn _helix lactose operon repressor AL536_04300 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL536_04310 SM00450 Rhodanese Homology Domain AL536_04340 SM00267 diguanylate cyclase AL536_04340 SM00448 cheY-homologous receiver domain AL536_04445 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AL536_04495 SM00822 AL536_04495 AL536_04500 SM01118 AL536_04500 AL536_04570 SM00422 helix_turn_helix, mercury resistance AL536_04605 SM01022 AL536_04605 AL536_04665 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AL536_04670 SM00487 DEAD-like helicases superfamily AL536_04670 SM00490 helicase superfamily c-terminal domain AL536_04675 SM00316 Ribosomal protein S1-like RNA-binding domain AL536_04675 SM00357 Cold shock protein domain AL536_04675 SM00955 AL536_04675 AL536_04700 SM00788 Adenylosuccinate synthetase AL536_04710 SM00862 Transcriptional regulatory protein, C terminal AL536_04730 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL536_04760 SM00342 helix_turn_helix, arabinose operon control protein AL536_04790 SM00849 Metallo-beta-lactamase superfamily AL536_04800 SM00420 helix_turn_helix, Deoxyribose operon repressor AL536_04800 SM01134 AL536_04800 AL536_04805 SM01266 AL536_04805 AL536_04810 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL536_04810 SM00267 diguanylate cyclase AL536_04815 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_04815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_04830 SM01005 Alanine racemase, C-terminal domain AL536_04855 SM00382 ATPases associated with a variety of cellular activities AL536_04865 SM00448 cheY-homologous receiver domain AL536_04865 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL536_04870 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL536_04870 SM00091 PAS domain AL536_04870 SM00387 Histidine kinase-like ATPases AL536_04870 SM00388 His Kinase A (phosphoacceptor) domain AL536_04870 SM00448 cheY-homologous receiver domain AL536_04895 SM00342 helix_turn_helix, arabinose operon control protein AL536_04980 SM00382 ATPases associated with a variety of cellular activities AL536_05020 SM00858 AL536_05020 AL536_05025 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL536_05025 SM00895 AL536_05025 AL536_05050 SM00861 Transketolase, pyrimidine binding domain AL536_05060 SM00893 Electron transfer flavoprotein domain AL536_05065 SM00893 Electron transfer flavoprotein domain AL536_05080 SM01217 AL536_05080 AL536_05085 SM00342 helix_turn_helix, arabinose operon control protein AL536_05090 SM00382 ATPases associated with a variety of cellular activities AL536_05115 SM00342 helix_turn_helix, arabinose operon control protein AL536_05140 SM00421 helix_turn_helix, Lux Regulon AL536_05140 SM00448 cheY-homologous receiver domain AL536_05145 SM00387 Histidine kinase-like ATPases AL536_05145 SM01049 AL536_05145 AL536_05175 SM00342 helix_turn_helix, arabinose operon control protein AL536_05180 SM00822 AL536_05180 AL536_05185 SM00882 Coenzyme A transferase AL536_05190 SM00822 AL536_05190 AL536_05225 SM00422 helix_turn_helix, mercury resistance AL536_05290 SM00342 helix_turn_helix, arabinose operon control protein AL536_05300 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL536_05315 SM00855 Phosphoglycerate mutase family AL536_05415 SM00342 helix_turn_helix, arabinose operon control protein AL536_05420 SM00382 ATPases associated with a variety of cellular activities AL536_05450 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AL536_05465 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_05465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_05470 SM00344 helix_turn_helix ASNC type AL536_05500 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_05500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_05525 SM00448 cheY-homologous receiver domain AL536_05525 SM00850 LytTr DNA-binding domain AL536_05550 SM00642 Alpha-amylase domain AL536_05605 SM00255 Toll - interleukin 1 - resistance AL536_05625 SM00382 ATPases associated with a variety of cellular activities AL536_05630 SM00382 ATPases associated with a variety of cellular activities AL536_05640 SM00052 Putative diguanylate phosphodiesterase AL536_05680 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL536_05705 SM00028 Tetratricopeptide repeats AL536_05750 SM00829 Enoylreductase AL536_05765 SM00382 ATPases associated with a variety of cellular activities AL536_05795 SM00481 DNA polymerase alpha chain like domain AL536_05805 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL536_05820 SM01350 AL536_05820 AL536_05830 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_05830 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_05840 SM00849 Metallo-beta-lactamase superfamily AL536_05915 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_05925 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_05925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_05975 SM00382 ATPases associated with a variety of cellular activities AL536_06025 SM00342 helix_turn_helix, arabinose operon control protein AL536_06045 SM00382 ATPases associated with a variety of cellular activities AL536_06060 SM00829 Enoylreductase AL536_06065 SM00342 helix_turn_helix, arabinose operon control protein AL536_06080 SM01064 Cellulose or protein binding domain AL536_06100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_06125 SM00354 helix_turn _helix lactose operon repressor AL536_06130 SM00382 ATPases associated with a variety of cellular activities AL536_06155 SM00342 helix_turn_helix, arabinose operon control protein AL536_06245 SM00382 ATPases associated with a variety of cellular activities AL536_06260 SM01240 AL536_06260 AL536_06285 SM00448 cheY-homologous receiver domain AL536_06310 SM00357 Cold shock protein domain AL536_06315 SM01322 AL536_06315 AL536_06320 SM00267 diguanylate cyclase AL536_06330 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL536_06330 SM00382 ATPases associated with a variety of cellular activities AL536_06355 SM00632 AL536_06355 AL536_06355 SM00642 Alpha-amylase domain AL536_06370 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_06370 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_06390 SM00327 von Willebrand factor (vWF) type A domain AL536_06395 SM00028 Tetratricopeptide repeats AL536_06410 SM00267 diguanylate cyclase AL536_06420 SM00091 PAS domain AL536_06420 SM00387 Histidine kinase-like ATPases AL536_06420 SM00388 His Kinase A (phosphoacceptor) domain AL536_06420 SM00448 cheY-homologous receiver domain AL536_06420 SM01079 AL536_06420 AL536_06425 SM00267 diguanylate cyclase AL536_06425 SM00448 cheY-homologous receiver domain AL536_06460 SM00342 helix_turn_helix, arabinose operon control protein AL536_06465 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AL536_06485 SM00062 Bacterial periplasmic substrate-binding proteins AL536_06555 SM00382 ATPases associated with a variety of cellular activities AL536_06555 SM00448 cheY-homologous receiver domain AL536_06570 SM00872 Alpha mannosidase, middle domain AL536_06580 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL536_06580 SM00866 AL536_06580 AL536_06585 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL536_06585 SM00091 PAS domain AL536_06585 SM00387 Histidine kinase-like ATPases AL536_06590 SM00495 Chitin-binding domain type 3 AL536_06600 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_06605 SM00091 PAS domain AL536_06605 SM00267 diguanylate cyclase AL536_06630 SM00354 helix_turn _helix lactose operon repressor AL536_06650 SM00382 ATPases associated with a variety of cellular activities AL536_06695 SM00382 ATPases associated with a variety of cellular activities AL536_06700 SM00382 ATPases associated with a variety of cellular activities AL536_06700 SM01086 C-terminal, D2-small domain, of ClpB protein AL536_06760 SM00344 helix_turn_helix ASNC type AL536_06770 SM00347 helix_turn_helix multiple antibiotic resistance protein AL536_06815 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL536_06815 SM00866 AL536_06815 AL536_06840 SM00382 ATPases associated with a variety of cellular activities AL536_06850 SM00052 Putative diguanylate phosphodiesterase AL536_06885 SM00342 helix_turn_helix, arabinose operon control protein AL536_06890 SM00450 Rhodanese Homology Domain AL536_06900 SM00421 helix_turn_helix, Lux Regulon AL536_06925 SM00420 helix_turn_helix, Deoxyribose operon repressor AL536_06925 SM01134 AL536_06925 AL536_06945 SM00458 Ricin-type beta-trefoil AL536_06970 SM00382 ATPases associated with a variety of cellular activities AL536_07000 SM00530 Helix-turn-helix XRE-family like proteins AL536_07005 SM00327 von Willebrand factor (vWF) type A domain AL536_07005 SM00609 Vault protein Inter-alpha-Trypsin domain AL536_07015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_07015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_07055 SM00062 Bacterial periplasmic substrate-binding proteins AL536_07085 SM00052 Putative diguanylate phosphodiesterase AL536_07085 SM00267 diguanylate cyclase AL536_07120 SM00267 diguanylate cyclase AL536_07125 SM00382 ATPases associated with a variety of cellular activities AL536_07145 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_07145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_07150 SM00487 DEAD-like helicases superfamily AL536_07150 SM00490 helicase superfamily c-terminal domain AL536_07160 SM00257 Lysin motif AL536_07170 SM00422 helix_turn_helix, mercury resistance AL536_07190 SM00028 Tetratricopeptide repeats AL536_07195 SM00267 diguanylate cyclase AL536_07275 SM00671 Sel1-like repeats. AL536_07290 SM00642 Alpha-amylase domain AL536_07305 SM00382 ATPases associated with a variety of cellular activities AL536_07315 SM00014 Acid phosphatase homologues AL536_07325 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL536_07340 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_07340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_07350 SM00382 ATPases associated with a variety of cellular activities AL536_07355 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL536_07360 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AL536_07360 SM00636 AL536_07360 AL536_07375 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL536_07420 SM00257 Lysin motif AL536_07440 SM00642 Alpha-amylase domain AL536_07455 SM00421 helix_turn_helix, Lux Regulon AL536_07495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_07495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_07495 SM01049 AL536_07495 AL536_07545 SM00470 ParB-like nuclease domain AL536_07565 SM00448 cheY-homologous receiver domain AL536_07570 SM00073 Histidine Phosphotransfer domain AL536_07570 SM00260 Two component signalling adaptor domain AL536_07570 SM00387 Histidine kinase-like ATPases AL536_07570 SM01231 AL536_07570 AL536_07575 SM00260 Two component signalling adaptor domain AL536_07580 SM00260 Two component signalling adaptor domain AL536_07585 SM00091 PAS domain AL536_07585 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_07585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_07590 SM00138 Methyltransferase, chemotaxis proteins AL536_07600 SM00448 cheY-homologous receiver domain AL536_07605 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_07615 SM00331 Sigma factor PP2C-like phosphatases AL536_07615 SM00448 cheY-homologous receiver domain AL536_07625 SM00382 ATPases associated with a variety of cellular activities AL536_07630 SM00052 Putative diguanylate phosphodiesterase AL536_07630 SM00267 diguanylate cyclase AL536_07630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_07650 SM00421 helix_turn_helix, Lux Regulon AL536_07665 SM00342 helix_turn_helix, arabinose operon control protein AL536_07670 SM00563 Phosphate acyltransferases AL536_07695 SM00670 Large family of predicted nucleotide-binding domains AL536_07700 SM00487 DEAD-like helicases superfamily AL536_07700 SM00490 helicase superfamily c-terminal domain AL536_07755 SM00267 diguanylate cyclase AL536_07780 SM00052 Putative diguanylate phosphodiesterase AL536_07780 SM00091 PAS domain AL536_07790 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL536_07845 SM01329 AL536_07845 AL536_07850 SM00917 LeuA allosteric (dimerisation) domain AL536_07860 SM00014 Acid phosphatase homologues AL536_07980 SM00838 Elongation factor G C-terminus AL536_07990 SM00358 Double-stranded RNA binding motif AL536_07990 SM00535 Ribonuclease III family AL536_08015 SM00073 Histidine Phosphotransfer domain AL536_08015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_08015 SM00387 Histidine kinase-like ATPases AL536_08015 SM00388 His Kinase A (phosphoacceptor) domain AL536_08015 SM00448 cheY-homologous receiver domain AL536_08025 SM00954 Region found in RelA / SpoT proteins AL536_08040 SM01192 AL536_08040 AL536_08040 SM01193 AL536_08040 AL536_08050 SM00382 ATPases associated with a variety of cellular activities AL536_08060 SM00287 Bacterial SH3 domain homologues AL536_08075 SM00880 AL536_08075 AL536_08075 SM01118 AL536_08075 AL536_08085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_08085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_08125 SM00387 Histidine kinase-like ATPases AL536_08125 SM00433 TopoisomeraseII AL536_08130 SM00434 DNA Topoisomerase IV AL536_08175 SM00644 AL536_08175 AL536_08200 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL536_08200 SM00895 AL536_08200 AL536_08230 SM00947 Carbonic anhydrase AL536_08235 SM00382 ATPases associated with a variety of cellular activities AL536_08280 SM00487 DEAD-like helicases superfamily AL536_08280 SM00490 helicase superfamily c-terminal domain AL536_08280 SM00847 Helicase associated domain (HA2) Add an annotation AL536_08305 SM00938 Nitrogen regulatory protein P-II AL536_08325 SM00382 ATPases associated with a variety of cellular activities AL536_08335 SM01068 Putative carbohydrate binding domain AL536_08355 SM00382 ATPases associated with a variety of cellular activities AL536_08360 SM00382 ATPases associated with a variety of cellular activities AL536_08380 SM00091 PAS domain AL536_08380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_08380 SM00387 Histidine kinase-like ATPases AL536_08380 SM00388 His Kinase A (phosphoacceptor) domain AL536_08380 SM00448 cheY-homologous receiver domain AL536_08450 SM01103 AL536_08450 AL536_08460 SM00382 ATPases associated with a variety of cellular activities AL536_08495 SM00316 Ribosomal protein S1-like RNA-binding domain AL536_08515 SM01387 AL536_08515 AL536_08520 SM00316 Ribosomal protein S1-like RNA-binding domain AL536_08520 SM00322 K homology RNA-binding domain AL536_08525 SM00028 Tetratricopeptide repeats AL536_08530 SM00347 helix_turn_helix multiple antibiotic resistance protein AL536_08550 SM00052 Putative diguanylate phosphodiesterase AL536_08550 SM00091 PAS domain AL536_08550 SM00267 diguanylate cyclase AL536_08575 SM00052 Putative diguanylate phosphodiesterase AL536_08575 SM00267 diguanylate cyclase AL536_08585 SM00487 DEAD-like helicases superfamily AL536_08585 SM00490 helicase superfamily c-terminal domain AL536_08610 SM00382 ATPases associated with a variety of cellular activities AL536_08630 SM00927 DNA mismatch repair enzyme MutH AL536_08640 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL536_08670 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL536_08685 SM00904 Riboflavin kinase AL536_08740 SM00448 cheY-homologous receiver domain AL536_08740 SM00850 LytTr DNA-binding domain AL536_08755 SM00830 Chorismate mutase type II AL536_08765 SM00382 ATPases associated with a variety of cellular activities AL536_08785 SM00052 Putative diguanylate phosphodiesterase AL536_08785 SM00267 diguanylate cyclase AL536_08795 SM00830 Chorismate mutase type II AL536_08805 SM00062 Bacterial periplasmic substrate-binding proteins AL536_08815 SM00363 S4 RNA-binding domain AL536_08825 SM00382 ATPases associated with a variety of cellular activities AL536_08825 SM01086 C-terminal, D2-small domain, of ClpB protein AL536_08845 SM00382 ATPases associated with a variety of cellular activities AL536_08940 SM00900 AL536_08940 AL536_08985 SM00267 diguanylate cyclase AL536_09015 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL536_09065 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AL536_09120 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL536_09165 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL536_09175 SM00935 Outer membrane protein (OmpH-like) AL536_09205 SM00481 DNA polymerase alpha chain like domain AL536_09215 SM00977 TilS substrate C-terminal domain AL536_09225 SM00938 Nitrogen regulatory protein P-II AL536_09240 SM00257 Lysin motif AL536_09245 SM00849 Metallo-beta-lactamase superfamily AL536_09260 SM00479 AL536_09260 AL536_09300 SM00363 S4 RNA-binding domain AL536_09305 SM00463 Small MutS-related domain AL536_09320 SM01081 Putative carbohydrate binding domain AL536_09350 SM00014 Acid phosphatase homologues AL536_09400 SM00858 AL536_09400 AL536_09405 SM00260 Two component signalling adaptor domain AL536_09405 SM00448 cheY-homologous receiver domain AL536_09410 SM00138 Methyltransferase, chemotaxis proteins AL536_09455 SM00047 Lysozyme subfamily 2 AL536_09575 SM01400 AL536_09575 AL536_09595 SM00937 AL536_09595 AL536_09670 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_09670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_09685 SM01130 AL536_09685 AL536_09735 SM00354 helix_turn _helix lactose operon repressor AL536_09790 SM00382 ATPases associated with a variety of cellular activities AL536_09795 SM00091 PAS domain AL536_09795 SM00387 Histidine kinase-like ATPases AL536_09795 SM00388 His Kinase A (phosphoacceptor) domain AL536_09800 SM00382 ATPases associated with a variety of cellular activities AL536_09800 SM00448 cheY-homologous receiver domain AL536_09825 SM00382 ATPases associated with a variety of cellular activities AL536_09880 SM00463 Small MutS-related domain AL536_09900 SM00822 AL536_09900 AL536_09930 SM00825 Beta-ketoacyl synthase AL536_09940 SM00859 Semialdehyde dehydrogenase, NAD binding domain AL536_10030 SM00861 Transketolase, pyrimidine binding domain AL536_10045 SM00881 CoA binding domain AL536_10055 SM00382 ATPases associated with a variety of cellular activities AL536_10065 SM00342 helix_turn_helix, arabinose operon control protein AL536_10070 SM00899 AL536_10070 AL536_10090 SM00836 DALR anticodon binding domain AL536_10090 SM01016 Arginyl tRNA synthetase N terminal dom AL536_10105 SM00855 Phosphoglycerate mutase family AL536_10115 SM00382 ATPases associated with a variety of cellular activities AL536_10115 SM00962 SRP54-type protein, GTPase domain AL536_10140 SM00073 Histidine Phosphotransfer domain AL536_10140 SM00260 Two component signalling adaptor domain AL536_10140 SM00387 Histidine kinase-like ATPases AL536_10140 SM01231 AL536_10140 AL536_10145 SM00448 cheY-homologous receiver domain AL536_10155 SM00260 Two component signalling adaptor domain AL536_10160 SM00260 Two component signalling adaptor domain AL536_10170 SM00382 ATPases associated with a variety of cellular activities AL536_10240 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AL536_10240 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AL536_10240 SM00493 AL536_10240 AL536_10405 SM00859 Semialdehyde dehydrogenase, NAD binding domain AL536_10440 SM00316 Ribosomal protein S1-like RNA-binding domain AL536_10445 SM00363 S4 RNA-binding domain AL536_10475 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AL536_10480 SM00822 AL536_10480 AL536_10490 SM00825 Beta-ketoacyl synthase AL536_10565 SM00260 Two component signalling adaptor domain AL536_10565 SM00448 cheY-homologous receiver domain AL536_10570 SM00481 DNA polymerase alpha chain like domain AL536_10615 SM00862 Transcriptional regulatory protein, C terminal AL536_10635 SM01144 AL536_10635 AL536_10640 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL536_10645 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL536_10675 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AL536_10695 SM00563 Phosphate acyltransferases AL536_10705 SM00978 AL536_10705 AL536_10715 SM00342 helix_turn_helix, arabinose operon control protein AL536_10715 SM00871 Bacterial transcription activator, effector binding domain AL536_10735 SM00858 AL536_10735 AL536_10935 SM00382 ATPases associated with a variety of cellular activities AL536_10935 SM00448 cheY-homologous receiver domain AL536_10960 SM00382 ATPases associated with a variety of cellular activities AL536_10975 SM00344 helix_turn_helix ASNC type AL536_11000 SM00062 Bacterial periplasmic substrate-binding proteins AL536_11000 SM00267 diguanylate cyclase AL536_11025 SM00530 Helix-turn-helix XRE-family like proteins AL536_11080 SM00116 Domain in cystathionine beta-synthase and other proteins. AL536_11085 SM00421 helix_turn_helix, Lux Regulon AL536_11110 SM00052 Putative diguanylate phosphodiesterase AL536_11170 SM00347 helix_turn_helix multiple antibiotic resistance protein AL536_11175 SM00357 Cold shock protein domain AL536_11195 SM00342 helix_turn_helix, arabinose operon control protein AL536_11200 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL536_11220 SM00342 helix_turn_helix, arabinose operon control protein AL536_11270 SM00387 Histidine kinase-like ATPases AL536_11270 SM00388 His Kinase A (phosphoacceptor) domain AL536_11275 SM00448 cheY-homologous receiver domain AL536_11275 SM00862 Transcriptional regulatory protein, C terminal AL536_11280 SM00014 Acid phosphatase homologues AL536_11290 SM00487 DEAD-like helicases superfamily AL536_11290 SM00490 helicase superfamily c-terminal domain AL536_11325 SM00421 helix_turn_helix, Lux Regulon AL536_11325 SM00448 cheY-homologous receiver domain AL536_11330 SM00387 Histidine kinase-like ATPases AL536_11330 SM00388 His Kinase A (phosphoacceptor) domain AL536_11345 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL536_11365 SM00267 diguanylate cyclase AL536_11365 SM01079 AL536_11365 AL536_11370 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL536_11490 SM00823 Phosphopantetheine attachment site AL536_11495 SM00382 ATPases associated with a variety of cellular activities AL536_11505 SM00354 helix_turn _helix lactose operon repressor AL536_11535 SM00382 ATPases associated with a variety of cellular activities AL536_11575 SM00342 helix_turn_helix, arabinose operon control protein AL536_11575 SM00871 Bacterial transcription activator, effector binding domain AL536_11585 SM00448 cheY-homologous receiver domain AL536_11585 SM00862 Transcriptional regulatory protein, C terminal AL536_11590 SM00388 His Kinase A (phosphoacceptor) domain AL536_11600 SM00354 helix_turn _helix lactose operon repressor AL536_11605 SM00640 Glycosyl hydrolases family 32 AL536_11610 SM00052 Putative diguanylate phosphodiesterase AL536_11630 SM00825 Beta-ketoacyl synthase AL536_11635 SM00822 AL536_11635 AL536_11645 SM00825 Beta-ketoacyl synthase AL536_11705 SM00563 Phosphate acyltransferases AL536_11745 SM00382 ATPases associated with a variety of cellular activities AL536_11750 SM00382 ATPases associated with a variety of cellular activities AL536_11795 SM00382 ATPases associated with a variety of cellular activities AL536_11800 SM00267 diguanylate cyclase AL536_11825 SM00382 ATPases associated with a variety of cellular activities AL536_11840 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL536_11855 SM01012 AL536_11855 AL536_11870 SM00382 ATPases associated with a variety of cellular activities AL536_11890 SM00729 Elongator protein 3, MiaB family, Radical SAM AL536_11890 SM00876 Biotin and Thiamin Synthesis associated domain AL536_11975 SM00528 Domain in histone-like proteins of HNS family AL536_11985 SM00382 ATPases associated with a variety of cellular activities AL536_12040 SM00357 Cold shock protein domain AL536_12050 SM00382 ATPases associated with a variety of cellular activities AL536_12050 SM01086 C-terminal, D2-small domain, of ClpB protein AL536_12055 SM00316 Ribosomal protein S1-like RNA-binding domain AL536_12085 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AL536_12085 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AL536_12085 SM00493 AL536_12085 AL536_12090 SM00267 diguanylate cyclase AL536_12125 SM00354 helix_turn _helix lactose operon repressor AL536_12135 SM00448 cheY-homologous receiver domain AL536_12135 SM00862 Transcriptional regulatory protein, C terminal AL536_12255 SM00062 Bacterial periplasmic substrate-binding proteins AL536_12270 SM01131 AL536_12270 AL536_12285 SM00382 ATPases associated with a variety of cellular activities AL536_12310 SM00382 ATPases associated with a variety of cellular activities AL536_12380 SM00155 Phospholipase D. Active site motifs. AL536_12415 SM01130 AL536_12415 AL536_12425 SM00382 ATPases associated with a variety of cellular activities AL536_12460 SM00382 ATPases associated with a variety of cellular activities AL536_12485 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL536_12485 SM00267 diguanylate cyclase AL536_12500 SM00357 Cold shock protein domain AL536_12545 SM00327 von Willebrand factor (vWF) type A domain AL536_12550 SM00327 von Willebrand factor (vWF) type A domain AL536_12570 SM00387 Histidine kinase-like ATPases AL536_12575 SM00448 cheY-homologous receiver domain AL536_12575 SM00862 Transcriptional regulatory protein, C terminal AL536_12585 SM00487 DEAD-like helicases superfamily AL536_12585 SM00490 helicase superfamily c-terminal domain AL536_12590 SM00363 S4 RNA-binding domain AL536_12615 SM00382 ATPases associated with a variety of cellular activities AL536_12645 SM00112 Cadherin repeats. AL536_12665 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_12665 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_12665 SM01049 AL536_12665 AL536_12695 SM01350 AL536_12695 AL536_12705 SM00852 Probable molybdopterin binding domain AL536_12735 SM00434 DNA Topoisomerase IV AL536_12780 SM00849 Metallo-beta-lactamase superfamily AL536_12810 SM00387 Histidine kinase-like ATPases AL536_12810 SM01049 AL536_12810 AL536_12815 SM00421 helix_turn_helix, Lux Regulon AL536_12815 SM00448 cheY-homologous receiver domain AL536_12820 SM00347 helix_turn_helix multiple antibiotic resistance protein AL536_12830 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_12830 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_12835 SM00479 AL536_12835 AL536_12840 SM00100 Cyclic nucleotide-monophosphate binding domain AL536_12840 SM00116 Domain in cystathionine beta-synthase and other proteins. AL536_12870 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_12870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_12885 SM00382 ATPases associated with a variety of cellular activities AL536_12945 SM00091 PAS domain AL536_12945 SM00382 ATPases associated with a variety of cellular activities AL536_12975 SM00387 Histidine kinase-like ATPases AL536_12980 SM00448 cheY-homologous receiver domain AL536_13010 SM01038 Beta galactosidase small chain AL536_13020 SM00382 ATPases associated with a variety of cellular activities AL536_13055 SM00342 helix_turn_helix, arabinose operon control protein AL536_13060 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL536_13060 SM00895 AL536_13060 AL536_13090 SM00347 helix_turn_helix multiple antibiotic resistance protein AL536_13120 SM00052 Putative diguanylate phosphodiesterase AL536_13170 SM00420 helix_turn_helix, Deoxyribose operon repressor AL536_13170 SM01134 AL536_13170 AL536_13175 SM00382 ATPases associated with a variety of cellular activities AL536_13200 SM00849 Metallo-beta-lactamase superfamily AL536_13290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_13300 SM01144 AL536_13300 AL536_13315 SM00852 Probable molybdopterin binding domain AL536_13325 SM00382 ATPases associated with a variety of cellular activities AL536_13340 SM00382 ATPases associated with a variety of cellular activities AL536_13340 SM00448 cheY-homologous receiver domain AL536_13345 SM00387 Histidine kinase-like ATPases AL536_13345 SM00388 His Kinase A (phosphoacceptor) domain AL536_13390 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL536_13440 SM00382 ATPases associated with a variety of cellular activities AL536_13470 SM00100 Cyclic nucleotide-monophosphate binding domain AL536_13470 SM00419 helix_turn_helix, cAMP Regulatory protein AL536_13520 SM00897 FIST N domain AL536_13520 SM01204 AL536_13520 AL536_13525 SM00387 Histidine kinase-like ATPases AL536_13525 SM00388 His Kinase A (phosphoacceptor) domain AL536_13525 SM00448 cheY-homologous receiver domain AL536_13540 SM00479 AL536_13540 AL536_13645 SM00382 ATPases associated with a variety of cellular activities AL536_13655 SM00981 AL536_13655 AL536_13690 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL536_13690 SM00245 tail specific protease AL536_13695 SM00945 ProQ/FINO family AL536_13705 SM00382 ATPases associated with a variety of cellular activities AL536_13725 SM00316 Ribosomal protein S1-like RNA-binding domain AL536_13810 SM00382 ATPases associated with a variety of cellular activities AL536_13810 SM00487 DEAD-like helicases superfamily AL536_13810 SM00490 helicase superfamily c-terminal domain AL536_13810 SM00847 Helicase associated domain (HA2) Add an annotation AL536_13845 SM00479 AL536_13845 AL536_13850 SM00267 diguanylate cyclase AL536_13850 SM01079 AL536_13850 AL536_13870 SM00267 diguanylate cyclase AL536_13880 SM00267 diguanylate cyclase AL536_13885 SM00062 Bacterial periplasmic substrate-binding proteins AL536_13915 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL536_13915 SM00091 PAS domain AL536_13915 SM00267 diguanylate cyclase AL536_13955 SM00062 Bacterial periplasmic substrate-binding proteins AL536_13970 SM00382 ATPases associated with a variety of cellular activities AL536_13990 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AL536_14040 SM00387 Histidine kinase-like ATPases AL536_14040 SM00388 His Kinase A (phosphoacceptor) domain AL536_14045 SM00448 cheY-homologous receiver domain AL536_14045 SM00862 Transcriptional regulatory protein, C terminal AL536_14070 SM00054 EF-hand, calcium binding motif AL536_14080 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL536_14080 SM00091 PAS domain AL536_14080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_14090 SM00357 Cold shock protein domain AL536_14130 SM00267 diguanylate cyclase AL536_14140 SM00642 Alpha-amylase domain AL536_14145 SM00260 Two component signalling adaptor domain AL536_14145 SM00448 cheY-homologous receiver domain AL536_14155 SM00448 cheY-homologous receiver domain AL536_14160 SM00387 Histidine kinase-like ATPases AL536_14200 SM00028 Tetratricopeptide repeats AL536_14200 SM00386 HAT (Half-A-TPR) repeats AL536_14255 SM00871 Bacterial transcription activator, effector binding domain AL536_14275 SM00382 ATPases associated with a variety of cellular activities AL536_14290 SM00855 Phosphoglycerate mutase family AL536_14310 SM00903 Flavin reductase like domain AL536_14350 SM00052 Putative diguanylate phosphodiesterase AL536_14350 SM00091 PAS domain AL536_14350 SM00267 diguanylate cyclase AL536_14375 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL536_14375 SM00091 PAS domain AL536_14375 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_14390 SM00411 bacterial (prokaryotic) histone like domain AL536_14395 SM00873 B3/4 domain AL536_14395 SM00874 tRNA synthetase B5 domain AL536_14395 SM00896 Ferredoxin-fold anticodon binding domain AL536_14415 SM00267 diguanylate cyclase AL536_14455 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL536_14455 SM00465 GIY-YIG type nucleases (URI domain) AL536_14460 SM00421 helix_turn_helix, Lux Regulon AL536_14460 SM00448 cheY-homologous receiver domain AL536_14465 SM00486 DNA polymerase type-B family AL536_14470 SM00052 Putative diguanylate phosphodiesterase AL536_14480 SM00841 Elongation factor P, C-terminal AL536_14480 SM01185 AL536_14480 AL536_14490 SM01022 AL536_14490 AL536_14495 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL536_14495 SM00866 AL536_14495 AL536_14555 SM00671 Sel1-like repeats. AL536_14605 SM00530 Helix-turn-helix XRE-family like proteins AL536_14615 SM01230 AL536_14615 AL536_14630 SM00487 DEAD-like helicases superfamily AL536_14630 SM00490 helicase superfamily c-terminal domain AL536_14635 SM00919 Malic enzyme, NAD binding domain AL536_14635 SM01274 AL536_14635 AL536_14670 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL536_14685 SM00422 helix_turn_helix, mercury resistance AL536_14750 SM00382 ATPases associated with a variety of cellular activities AL536_14755 SM00382 ATPases associated with a variety of cellular activities AL536_14785 SM00363 S4 RNA-binding domain AL536_14795 SM00481 DNA polymerase alpha chain like domain AL536_14910 SM00052 Putative diguanylate phosphodiesterase AL536_14915 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_14940 SM00388 His Kinase A (phosphoacceptor) domain AL536_14945 SM00448 cheY-homologous receiver domain AL536_14945 SM00862 Transcriptional regulatory protein, C terminal AL536_14965 SM00382 ATPases associated with a variety of cellular activities AL536_14970 SM00729 Elongator protein 3, MiaB family, Radical SAM AL536_14985 SM00387 Histidine kinase-like ATPases AL536_14990 SM00448 cheY-homologous receiver domain AL536_15085 SM00387 Histidine kinase-like ATPases AL536_15085 SM00388 His Kinase A (phosphoacceptor) domain AL536_15085 SM00448 cheY-homologous receiver domain AL536_15100 SM00028 Tetratricopeptide repeats AL536_15155 SM00382 ATPases associated with a variety of cellular activities AL536_15160 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL536_15170 SM00840 AL536_15170 AL536_15185 SM00052 Putative diguanylate phosphodiesterase AL536_15205 SM00491 AL536_15205 AL536_15220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_15220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_15240 SM00062 Bacterial periplasmic substrate-binding proteins AL536_15240 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL536_15245 SM00382 ATPases associated with a variety of cellular activities AL536_15265 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_15265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_15290 SM00763 PrkA AAA domain AL536_15320 SM00382 ATPases associated with a variety of cellular activities AL536_15325 SM00849 Metallo-beta-lactamase superfamily AL536_15340 SM00382 ATPases associated with a variety of cellular activities AL536_15355 SM00487 DEAD-like helicases superfamily AL536_15355 SM00490 helicase superfamily c-terminal domain AL536_15355 SM00982 AL536_15355 AL536_15355 SM01058 CarD-like/TRCF domain AL536_15405 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_15405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_15415 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL536_15430 SM00843 AL536_15430 AL536_15435 SM00344 helix_turn_helix ASNC type AL536_15440 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AL536_15440 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AL536_15465 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AL536_15470 SM00028 Tetratricopeptide repeats AL536_15480 SM00411 bacterial (prokaryotic) histone like domain AL536_15485 SM00316 Ribosomal protein S1-like RNA-binding domain AL536_15505 SM00411 bacterial (prokaryotic) histone like domain AL536_15510 SM00382 ATPases associated with a variety of cellular activities AL536_15510 SM00464 Found in ATP-dependent protease La (LON) AL536_15515 SM00382 ATPases associated with a variety of cellular activities AL536_15515 SM00994 ClpX C4-type zinc finger AL536_15515 SM01086 C-terminal, D2-small domain, of ClpB protein AL536_15530 SM00387 Histidine kinase-like ATPases AL536_15530 SM00388 His Kinase A (phosphoacceptor) domain AL536_15535 SM00382 ATPases associated with a variety of cellular activities AL536_15535 SM00448 cheY-homologous receiver domain AL536_15565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_15565 SM00387 Histidine kinase-like ATPases AL536_15565 SM00388 His Kinase A (phosphoacceptor) domain AL536_15570 SM00448 cheY-homologous receiver domain AL536_15570 SM00862 Transcriptional regulatory protein, C terminal AL536_15600 SM00052 Putative diguanylate phosphodiesterase AL536_15600 SM00267 diguanylate cyclase AL536_15615 SM00563 Phosphate acyltransferases AL536_15635 SM00857 Resolvase, N terminal domain AL536_15645 SM00421 helix_turn_helix, Lux Regulon AL536_15645 SM00448 cheY-homologous receiver domain AL536_15650 SM00387 Histidine kinase-like ATPases AL536_15670 SM00382 ATPases associated with a variety of cellular activities AL536_15725 SM00474 3'-5' exonuclease AL536_15755 SM00487 DEAD-like helicases superfamily AL536_15755 SM00491 AL536_15755 AL536_15780 SM00870 AL536_15780 AL536_15800 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL536_15840 SM00493 AL536_15840 AL536_15850 SM00382 ATPases associated with a variety of cellular activities AL536_15865 SM00448 cheY-homologous receiver domain AL536_15910 SM00226 Low molecular weight phosphatase family AL536_15920 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL536_15920 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_15965 SM00116 Domain in cystathionine beta-synthase and other proteins. AL536_15970 SM00267 diguanylate cyclase AL536_15990 SM00852 Probable molybdopterin binding domain AL536_15995 SM00729 Elongator protein 3, MiaB family, Radical SAM AL536_16010 SM00382 ATPases associated with a variety of cellular activities AL536_16010 SM00448 cheY-homologous receiver domain AL536_16015 SM00487 DEAD-like helicases superfamily AL536_16015 SM00490 helicase superfamily c-terminal domain AL536_16045 SM00052 Putative diguanylate phosphodiesterase AL536_16070 SM00421 helix_turn_helix, Lux Regulon AL536_16095 SM00632 AL536_16095 AL536_16095 SM00642 Alpha-amylase domain AL536_16130 SM00900 AL536_16130 AL536_16140 SM00478 endonuclease III AL536_16140 SM00525 AL536_16140 AL536_16160 SM00479 AL536_16160 AL536_16235 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AL536_16255 SM00387 Histidine kinase-like ATPases AL536_16260 SM00862 Transcriptional regulatory protein, C terminal AL536_16280 SM00116 Domain in cystathionine beta-synthase and other proteins. AL536_16285 SM00938 Nitrogen regulatory protein P-II AL536_16315 SM00244 prohibitin homologues AL536_16325 SM00422 helix_turn_helix, mercury resistance AL536_16340 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL536_16340 SM00292 breast cancer carboxy-terminal domain AL536_16340 SM00532 Ligase N family AL536_16345 SM00771 ZipA, C-terminal domain (FtsZ-binding) AL536_16380 SM00729 Elongator protein 3, MiaB family, Radical SAM AL536_16395 SM00116 Domain in cystathionine beta-synthase and other proteins. AL536_16395 SM01091 Transporter associated domain AL536_16450 SM00936 Penicillin-binding protein 5, C-terminal domain AL536_16465 SM00729 Elongator protein 3, MiaB family, Radical SAM AL536_16515 SM00642 Alpha-amylase domain AL536_16525 SM00354 helix_turn _helix lactose operon repressor AL536_16540 SM00382 ATPases associated with a variety of cellular activities AL536_16540 SM00930 AL536_16540 AL536_16570 SM00028 Tetratricopeptide repeats AL536_16575 SM00267 diguanylate cyclase AL536_16585 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AL536_16585 SM00475 5'-3' exonuclease AL536_16610 SM00981 AL536_16610 AL536_16635 SM00861 Transketolase, pyrimidine binding domain AL536_16710 SM01211 AL536_16710 AL536_16715 SM00062 Bacterial periplasmic substrate-binding proteins AL536_16730 SM00829 Enoylreductase AL536_16770 SM00271 DnaJ molecular chaperone homology domain AL536_16830 SM00487 DEAD-like helicases superfamily AL536_16830 SM00490 helicase superfamily c-terminal domain AL536_16840 SM00487 DEAD-like helicases superfamily AL536_16985 SM00382 ATPases associated with a variety of cellular activities AL536_17050 SM00495 Chitin-binding domain type 3 AL536_17060 SM00116 Domain in cystathionine beta-synthase and other proteins. AL536_17060 SM01240 AL536_17060 AL536_17080 SM00382 ATPases associated with a variety of cellular activities AL536_17085 SM00564 beta-propeller repeat AL536_17105 SM00530 Helix-turn-helix XRE-family like proteins AL536_17115 SM00562 AL536_17115 AL536_17140 SM00271 DnaJ molecular chaperone homology domain AL536_17190 SM01323 AL536_17190 AL536_17205 SM00116 Domain in cystathionine beta-synthase and other proteins. AL536_17245 SM00382 ATPases associated with a variety of cellular activities AL536_17275 SM00091 PAS domain AL536_17275 SM00387 Histidine kinase-like ATPases AL536_17275 SM00388 His Kinase A (phosphoacceptor) domain AL536_17280 SM00448 cheY-homologous receiver domain AL536_17280 SM00862 Transcriptional regulatory protein, C terminal AL536_17315 SM00464 Found in ATP-dependent protease La (LON) AL536_17355 SM00925 MltA specific insert domain AL536_17465 SM00028 Tetratricopeptide repeats AL536_17515 SM00858 AL536_17515 AL536_17535 SM00342 helix_turn_helix, arabinose operon control protein AL536_17560 SM00838 Elongation factor G C-terminus AL536_17560 SM00889 Elongation factor G, domain IV AL536_17565 SM00382 ATPases associated with a variety of cellular activities AL536_17595 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AL536_17600 SM01133 AL536_17600 AL536_17615 SM00382 ATPases associated with a variety of cellular activities AL536_17655 SM00986 Uracil DNA glycosylase superfamily AL536_17655 SM00987 UreE urease accessory protein, C-terminal domain AL536_17660 SM00518 AP endonuclease family 2 AL536_17700 SM00448 cheY-homologous receiver domain AL536_17700 SM00862 Transcriptional regulatory protein, C terminal AL536_17710 SM00073 Histidine Phosphotransfer domain AL536_17710 SM00091 PAS domain AL536_17710 SM00387 Histidine kinase-like ATPases AL536_17710 SM00388 His Kinase A (phosphoacceptor) domain AL536_17710 SM00448 cheY-homologous receiver domain AL536_17715 SM00091 PAS domain AL536_17715 SM00267 diguanylate cyclase AL536_17720 SM00729 Elongator protein 3, MiaB family, Radical SAM AL536_17795 SM00851 MGS-like domain AL536_17795 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AL536_17800 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AL536_17815 SM00957 SecA DEAD-like domain AL536_17815 SM00958 SecA preprotein cross-linking domain AL536_17830 SM00864 Tubulin/FtsZ family, GTPase domain AL536_17830 SM00865 Tubulin/FtsZ family, C-terminal domain AL536_17835 SM00842 Cell division protein FtsA AL536_17970 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL536_17975 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL536_18000 SM00382 ATPases associated with a variety of cellular activities AL536_18000 SM00962 SRP54-type protein, GTPase domain AL536_18000 SM00963 SRP54-type protein, helical bundle domain AL536_18010 SM01091 Transporter associated domain AL536_18040 SM00829 Enoylreductase AL536_18110 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AL536_18120 SM00382 ATPases associated with a variety of cellular activities AL536_18130 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AL536_18130 SM00534 ATPase domain of DNA mismatch repair MUTS family AL536_18140 SM00257 Lysin motif AL536_18185 SM00905 Dihydroneopterin aldolase AL536_18190 SM01207 AL536_18190 AL536_18215 SM00400 zinc finger AL536_18215 SM00493 AL536_18215 AL536_18215 SM00766 DNA primase DnaG DnaB-binding AL536_18235 SM00867 YceI-like domain AL536_18240 SM00116 Domain in cystathionine beta-synthase and other proteins. AL536_18240 SM00924 MgtE intracellular N domain AL536_18255 SM00563 Phosphate acyltransferases AL536_18280 SM00487 DEAD-like helicases superfamily AL536_18290 SM00490 helicase superfamily c-terminal domain AL536_18310 SM00382 ATPases associated with a variety of cellular activities AL536_18335 SM00420 helix_turn_helix, Deoxyribose operon repressor AL536_18335 SM01134 AL536_18335 AL536_18345 SM00267 diguanylate cyclase AL536_18385 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL536_18400 SM00861 Transketolase, pyrimidine binding domain AL536_18415 SM00731 SprT homologues. AL536_18440 SM00732 Likely ribonuclease with RNase H fold. AL536_18470 SM01152 AL536_18470 AL536_18485 SM00729 Elongator protein 3, MiaB family, Radical SAM AL536_18490 SM00478 endonuclease III AL536_18505 SM00478 endonuclease III AL536_18505 SM00525 AL536_18505 AL536_18540 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_18540 SM01049 AL536_18540 AL536_18570 SM00271 DnaJ molecular chaperone homology domain AL536_18590 SM00650 Ribosomal RNA adenine dimethylases AL536_18700 SM00316 Ribosomal protein S1-like RNA-binding domain AL536_18770 SM00382 ATPases associated with a variety of cellular activities AL536_18785 SM00965 Secretin and TonB N terminus short domain AL536_18805 SM00052 Putative diguanylate phosphodiesterase AL536_18805 SM00267 diguanylate cyclase AL536_18815 SM00421 helix_turn_helix, Lux Regulon AL536_18845 SM01018 B12 binding domain AL536_18975 SM01005 Alanine racemase, C-terminal domain AL536_19020 SM00838 Elongation factor G C-terminus AL536_19020 SM00889 Elongation factor G, domain IV AL536_19060 SM00320 WD40 repeats AL536_19075 SM00244 prohibitin homologues AL536_19080 SM00244 prohibitin homologues AL536_19100 SM00853 MutL C terminal dimerisation domain AL536_19100 SM01340 AL536_19100 AL536_19105 SM00257 Lysin motif AL536_19105 SM00646 AL536_19105 AL536_19165 SM00479 AL536_19165 AL536_19185 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_19185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_19230 SM00663 RNA polymerase I subunit A N-terminus AL536_19255 SM00649 Ribosomal protein L11/L12 AL536_19260 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AL536_19260 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AL536_19320 SM00155 Phospholipase D. Active site motifs. AL536_19395 SM00357 Cold shock protein domain AL536_19395 SM00382 ATPases associated with a variety of cellular activities AL536_19395 SM00959 Rho termination factor, N-terminal domain AL536_19405 SM00487 DEAD-like helicases superfamily AL536_19405 SM00490 helicase superfamily c-terminal domain AL536_19415 SM00387 Histidine kinase-like ATPases AL536_19415 SM00388 His Kinase A (phosphoacceptor) domain AL536_19415 SM00448 cheY-homologous receiver domain AL536_19425 SM00100 Cyclic nucleotide-monophosphate binding domain AL536_19430 SM00479 AL536_19430 AL536_19450 SM00878 Biotin carboxylase C-terminal domain AL536_19470 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_19470 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_19470 SM01049 AL536_19470 AL536_19475 SM00422 helix_turn_helix, mercury resistance AL536_19480 SM00798 AICARFT/IMPCHase bienzyme AL536_19480 SM00851 MGS-like domain AL536_19485 SM01209 AL536_19485 AL536_19485 SM01210 AL536_19485 AL536_19495 SM00411 bacterial (prokaryotic) histone like domain AL536_19520 SM00986 Uracil DNA glycosylase superfamily AL536_19520 SM00987 UreE urease accessory protein, C-terminal domain AL536_19525 SM00849 Metallo-beta-lactamase superfamily AL536_19525 SM01027 Beta-Casp domain AL536_19620 SM00226 Low molecular weight phosphatase family AL536_19655 SM00984 UDP binding domain AL536_19730 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AL536_19730 SM01232 AL536_19730 AL536_19755 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL536_19755 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_19755 SM01049 AL536_19755 AL536_19810 SM00382 ATPases associated with a variety of cellular activities AL536_19815 SM00382 ATPases associated with a variety of cellular activities AL536_19830 SM00341 Helicase and RNase D C-terminal AL536_19830 SM00487 DEAD-like helicases superfamily AL536_19830 SM00490 helicase superfamily c-terminal domain AL536_19830 SM00956 AL536_19830 AL536_19840 SM00342 helix_turn_helix, arabinose operon control protein AL536_19900 SM00347 helix_turn_helix multiple antibiotic resistance protein AL536_19940 SM00382 ATPases associated with a variety of cellular activities AL536_20070 SM01001 AIR carboxylase AL536_20095 SM00257 Lysin motif AL536_20160 SM00563 Phosphate acyltransferases AL536_20165 SM00382 ATPases associated with a variety of cellular activities AL536_20195 SM00829 Enoylreductase AL536_20230 SM00836 DALR anticodon binding domain AL536_20245 SM00387 Histidine kinase-like ATPases AL536_20245 SM00433 TopoisomeraseII AL536_20255 SM00480 DNA polymerase III beta subunit AL536_20260 SM00382 ATPases associated with a variety of cellular activities AL536_20260 SM00760 Bacterial dnaA protein helix-turn-helix domain AL536_20265 SM00062 Bacterial periplasmic substrate-binding proteins AL536_20275 SM00382 ATPases associated with a variety of cellular activities AL536_20305 SM01228 AL536_20305 AL536_20320 SM00470 ParB-like nuclease domain AL536_20360 SM00382 ATPases associated with a variety of cellular activities AL536_20380 SM00062 Bacterial periplasmic substrate-binding proteins AL536_20500 SM00876 Biotin and Thiamin Synthesis associated domain AL536_20505 SM00382 ATPases associated with a variety of cellular activities AL536_20555 SM00344 helix_turn_helix ASNC type AL536_20560 SM00052 Putative diguanylate phosphodiesterase AL536_20560 SM00091 PAS domain AL536_20560 SM00267 diguanylate cyclase AL536_20605 SM00382 ATPases associated with a variety of cellular activities AL536_20620 SM01007 Class II Aldolase and Adducin N-terminal domain AL536_20635 SM00342 helix_turn_helix, arabinose operon control protein AL536_20690 SM01004 Delta-aminolevulinic acid dehydratase AL536_20700 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AL536_20700 SM00474 3'-5' exonuclease AL536_20700 SM00475 5'-3' exonuclease AL536_20700 SM00482 DNA polymerase A domain AL536_20730 SM00729 Elongator protein 3, MiaB family, Radical SAM AL536_20760 SM01219 AL536_20760 AL536_20795 SM00052 Putative diguanylate phosphodiesterase AL536_20795 SM00267 diguanylate cyclase AL536_20795 SM00897 FIST N domain AL536_20795 SM01204 AL536_20795 AL536_20800 SM01144 AL536_20800 AL536_20830 SM00052 Putative diguanylate phosphodiesterase AL536_20835 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL536_20840 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL536_20900 SM00382 ATPases associated with a variety of cellular activities AL536_20900 SM00962 SRP54-type protein, GTPase domain AL536_20900 SM00963 SRP54-type protein, helical bundle domain AL536_20905 SM00382 ATPases associated with a variety of cellular activities AL536_20920 SM00450 Rhodanese Homology Domain AL536_20945 SM00563 Phosphate acyltransferases AL536_21045 SM00052 Putative diguanylate phosphodiesterase AL536_21105 SM00954 Region found in RelA / SpoT proteins AL536_21130 SM00360 RNA recognition motif AL536_21190 SM00052 Putative diguanylate phosphodiesterase AL536_21190 SM00267 diguanylate cyclase AL536_21190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_21195 SM00382 ATPases associated with a variety of cellular activities AL536_21195 SM00448 cheY-homologous receiver domain AL536_21200 SM00091 PAS domain AL536_21200 SM00387 Histidine kinase-like ATPases AL536_21200 SM00388 His Kinase A (phosphoacceptor) domain AL536_21210 SM01230 AL536_21210 AL536_21260 SM00363 S4 RNA-binding domain AL536_21275 SM00382 ATPases associated with a variety of cellular activities AL536_21355 SM00316 Ribosomal protein S1-like RNA-binding domain AL536_21355 SM00732 Likely ribonuclease with RNase H fold. AL536_21370 SM00354 helix_turn _helix lactose operon repressor AL536_21395 SM00448 cheY-homologous receiver domain AL536_21395 SM00862 Transcriptional regulatory protein, C terminal AL536_21400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_21400 SM00387 Histidine kinase-like ATPases AL536_21400 SM00388 His Kinase A (phosphoacceptor) domain AL536_21410 SM00487 DEAD-like helicases superfamily AL536_21410 SM00490 helicase superfamily c-terminal domain AL536_21420 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL536_21420 SM00954 Region found in RelA / SpoT proteins AL536_21425 SM01409 AL536_21425 AL536_21430 SM00072 Guanylate kinase homologues. AL536_21450 SM01091 Transporter associated domain AL536_21455 SM00421 helix_turn_helix, Lux Regulon AL536_21455 SM00448 cheY-homologous receiver domain AL536_21510 SM00267 diguanylate cyclase AL536_21530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL536_21530 SM00387 Histidine kinase-like ATPases AL536_21530 SM00388 His Kinase A (phosphoacceptor) domain AL536_21535 SM00448 cheY-homologous receiver domain AL536_21535 SM00862 Transcriptional regulatory protein, C terminal AL536_21585 SM00919 Malic enzyme, NAD binding domain AL536_21585 SM01274 AL536_21585 AL536_21595 SM00487 DEAD-like helicases superfamily AL536_21595 SM00490 helicase superfamily c-terminal domain AL536_21600 SM00354 helix_turn _helix lactose operon repressor AL536_21615 SM00382 ATPases associated with a variety of cellular activities AL536_21615 SM01086 C-terminal, D2-small domain, of ClpB protein AL536_21660 SM00883 Chaperonin 10 Kd subunit AL536_21670 SM00507 HNH nucleases AL536_21675 SM00507 HNH nucleases AL536_21685 SM00382 ATPases associated with a variety of cellular activities AL536_21705 SM00841 Elongation factor P, C-terminal AL536_21705 SM01185 AL536_21705 AL536_21735 SM00450 Rhodanese Homology Domain AL536_21750 SM00971 Serine acetyltransferase, N-terminal AL536_21770 SM00859 Semialdehyde dehydrogenase, NAD binding domain AL536_21830 SM00965 Secretin and TonB N terminus short domain AL536_21900 SM01150 AL536_21900 AL536_21905 SM00100 Cyclic nucleotide-monophosphate binding domain AL536_21905 SM00419 helix_turn_helix, cAMP Regulatory protein AL536_21930 SM00382 ATPases associated with a variety of cellular activities AL536_21960 SM00788 Adenylosuccinate synthetase AL536_21965 SM00671 Sel1-like repeats. AL536_21975 SM00316 Ribosomal protein S1-like RNA-binding domain AL536_21975 SM00357 Cold shock protein domain AL536_21975 SM00955 AL536_21975 AL536_21980 SM00967 RNA 2'-O ribose methyltransferase substrate binding AL536_21985 SM01403 AL536_21985 AL536_22005 SM01382 AL536_22005 AL536_22005 SM01383 AL536_22005 AL536_22020 SM00322 K homology RNA-binding domain AL536_22040 SM01374 AL536_22040 AL536_22045 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AL536_22110 SM00363 S4 RNA-binding domain AL536_22110 SM01390 AL536_22110 AL536_22115 SM00662 RNA polymerases D AL536_22150 SM00487 DEAD-like helicases superfamily AL536_22150 SM00490 helicase superfamily c-terminal domain AL536_22205 SM00382 ATPases associated with a variety of cellular activities AL536_22275 SM00382 ATPases associated with a variety of cellular activities AL536_22290 SM00924 MgtE intracellular N domain AL536_22320 SM00382 ATPases associated with a variety of cellular activities AL536_22340 SM00116 Domain in cystathionine beta-synthase and other proteins. AL536_22350 SM00382 ATPases associated with a variety of cellular activities AL536_22525 SM00671 Sel1-like repeats. AL536_22810 SM01234 AL536_22810