locus-tag	class	description
FIU11_00015	COG3609	addiction module antidote protein, CC2985 family
FIU11_00060	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FIU11_00070	COG1902	pentaerythritol trinitrate reductase activity
FIU11_00075	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
FIU11_00080	COG1028	Short-chain dehydrogenase reductase Sdr
FIU11_00130	COG2203	Gaf domain
FIU11_00130	COG3706	GGDEF domain
FIU11_00130	COG4251	negative regulation of phosphorylation
FIU11_00130	COG5001	Diguanylate cyclase
FIU11_00155	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FIU11_00190	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FIU11_00195	COG0668	transmembrane transport
FIU11_00270	COG1484	DNA-dependent DNA replication
FIU11_00305	COG0714	Associated with various cellular activities
FIU11_00385	COG1288	antiporter activity
FIU11_00390	COG2988	succinylglutamate desuccinylase activity
FIU11_00410	COG1192	Involved in chromosome partitioning
FIU11_00420	COG3086	response to oxidative stress
FIU11_00435	COG1595	DNA-templated transcription, initiation
FIU11_00440	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FIU11_00450	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
FIU11_00455	COG0354	folic acid binding
FIU11_00470	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FIU11_00475	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FIU11_00485	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
FIU11_00495	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FIU11_00500	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
FIU11_00505	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FIU11_00510	COG0440	acetolactate synthase activity
FIU11_00515	COG0028	Belongs to the TPP enzyme family
FIU11_00520	COG1022	Amp-dependent synthetase and ligase
FIU11_00525	COG0583	DNA-binding transcription factor activity
FIU11_00545	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FIU11_00550	COG0473	3-isopropylmalate dehydrogenase activity
FIU11_00555	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
FIU11_00560	COG0066	3-isopropylmalate dehydratase activity
FIU11_00605	COG3437	response regulator, receiver
FIU11_00630	COG3706	GGDEF domain
FIU11_00640	COG0795	lipopolysaccharide-transporting ATPase activity
FIU11_00645	COG0795	lipopolysaccharide-transporting ATPase activity
FIU11_00650	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FIU11_00660	COG0525	valine-tRNA ligase activity
FIU11_00665	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FIU11_00670	COG0564	pseudouridine synthase activity
FIU11_00680	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FIU11_00685	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
FIU11_00690	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FIU11_00695	COG0540	Belongs to the ATCase OTCase family
FIU11_00700	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
FIU11_00705	COG0251	oxidation-reduction process
FIU11_00710	COG0204	Acyl-transferase
FIU11_00720	COG5007	Belongs to the BolA IbaG family
FIU11_00725	COG3113	response to antibiotic
FIU11_00730	COG2854	intermembrane phospholipid transfer
FIU11_00735	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FIU11_00740	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FIU11_00745	COG1127	ABC transporter
FIU11_00755	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
FIU11_00755	COG0517	IMP dehydrogenase activity
FIU11_00760	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
FIU11_00770	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
FIU11_00775	COG1137	ATPase activity
FIU11_00785	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FIU11_00790	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FIU11_00800	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FIU11_00805	COG2239	Acts as a magnesium transporter
FIU11_00810	COG0312	modulator of DNA gyrase
FIU11_00815	COG3028	Belongs to the UPF0307 family
FIU11_00820	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
FIU11_00825	COG1178	ABC-type Fe3 transport system permease component
FIU11_00830	COG4143	(ABC) transporter
FIU11_00835	COG0163	prenyltransferase activity
FIU11_00840	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FIU11_00845	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
FIU11_00850	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
FIU11_00860	COG2105	PFAM AIG2 family protein
FIU11_00870	COG0729	surface antigen
FIU11_00875	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FIU11_00880	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
FIU11_00895	COG1136	(ABC) transporter
FIU11_00895	COG0577	efflux transmembrane transporter activity
FIU11_00915	COG0529	Catalyzes the synthesis of activated sulfate
FIU11_00920	COG0471	metal ion transport
FIU11_00920	COG3273	potassium ion transport
FIU11_00925	COG2895	sulfate adenylyltransferase (ATP) activity
FIU11_00930	COG0175	sulfate reduction
FIU11_00935	COG1648	precorrin-2 dehydrogenase activity
FIU11_00935	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FIU11_00940	COG0737	Belongs to the 5'-nucleotidase family
FIU11_00950	COG0513	Belongs to the DEAD box helicase family
FIU11_00955	COG2153	protein acetylation
FIU11_00965	COG3061	Opacity-associated protein A
FIU11_00970	COG0545	Peptidyl-prolyl cis-trans isomerase
FIU11_00980	COG0203	ribosomal protein L17
FIU11_00985	COG0202	RNA polymerase activity
FIU11_00990	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
FIU11_00995	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
FIU11_01000	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
FIU11_01010	COG0201	protein transport
FIU11_01020	COG1841	ribosomal large subunit assembly
FIU11_01030	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
FIU11_01035	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
FIU11_01040	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
FIU11_01045	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
FIU11_01050	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
FIU11_01055	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
FIU11_01060	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
FIU11_01065	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
FIU11_01070	COG0255	Belongs to the universal ribosomal protein uL29 family
FIU11_01085	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
FIU11_01090	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
FIU11_01100	COG0089	rRNA binding
FIU11_01105	COG0088	Forms part of the polypeptide exit tunnel
FIU11_01110	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
FIU11_01115	COG0051	transcription antitermination factor activity, RNA binding
FIU11_01120	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FIU11_01125	COG0557	exoribonuclease II activity
FIU11_01130	COG3083	sulfuric ester hydrolase activity
FIU11_01135	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
FIU11_01140	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
FIU11_01150	COG1047	Peptidyl-prolyl cis-trans
FIU11_01155	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
FIU11_01165	COG2249	NAD(P)H dehydrogenase (quinone) activity
FIU11_01170	COG0488	(ABC) transporter
FIU11_01180	COG0429	hydrolase of the alpha beta-hydrolase fold
FIU11_01190	COG3954	Phosphoribulokinase
FIU11_01195	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FIU11_01205	COG1012	belongs to the aldehyde dehydrogenase family
FIU11_01215	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FIU11_01220	COG0512	Glutamine amidotransferase of anthranilate synthase
FIU11_01230	COG0180	Tryptophanyl-tRNA synthetase
FIU11_01240	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FIU11_01245	COG0338	D12 class N6 adenine-specific DNA methyltransferase
FIU11_01255	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
FIU11_01290	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FIU11_01300	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FIU11_01300	COG0678	peroxiredoxin activity
FIU11_01310	COG0165	Argininosuccinate lyase
FIU11_01310	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
FIU11_01320	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FIU11_01325	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FIU11_01330	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FIU11_01335	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
FIU11_01345	COG1045	serine acetyltransferase
FIU11_01355	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
FIU11_01360	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FIU11_01375	COG1053	succinate dehydrogenase
FIU11_01380	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FIU11_01385	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
FIU11_01390	COG3080	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
FIU11_01395	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FIU11_01400	COG1509	lysine 2,3-aminomutase activity
FIU11_01405	COG1285	pathogenesis
FIU11_01415	COG1119	ATPase activity
FIU11_01420	COG0459	protein refolding
FIU11_01425	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FIU11_01450	COG0149	triose-phosphate isomerase activity
FIU11_01455	COG0534	Mate efflux family protein
FIU11_01460	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FIU11_01465	COG1575	Belongs to the MenA family. Type 1 subfamily
FIU11_01470	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
FIU11_01475	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
FIU11_01485	COG1609	Transcriptional regulator
FIU11_01490	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FIU11_01500	COG0281	malic enzyme
FIU11_01515	COG0626	cystathionine gamma-synthase activity
FIU11_01520	COG0527	aspartate kinase activity
FIU11_01520	COG0460	homoserine dehydrogenase
FIU11_01525	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FIU11_01535	COG1494	fructose-1,6-bisphosphatase
FIU11_01540	COG0205	6-phosphofructokinase activity
FIU11_01545	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
FIU11_01555	COG0745	RESPONSE REGULATOR receiver
FIU11_01560	COG2205	protein histidine kinase activity
FIU11_01565	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FIU11_01570	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FIU11_01580	COG3706	GGDEF domain
FIU11_01585	COG1027	Aspartate ammonia-lyase
FIU11_01590	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FIU11_01595	COG1288	antiporter activity
FIU11_01610	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FIU11_01615	COG0540	Belongs to the ATCase OTCase family
FIU11_01620	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
FIU11_01630	COG4232	protein-disulfide reductase activity
FIU11_01645	COG3263	regulation of cellular component size
FIU11_01655	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FIU11_01660	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FIU11_01665	COG0194	GDP metabolic process
FIU11_01675	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FIU11_01680	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FIU11_01685	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FIU11_01690	COG2233	PERMEase
FIU11_01695	COG2205	protein histidine kinase activity
FIU11_01700	COG0745	RESPONSE REGULATOR receiver
FIU11_01705	COG0800	Aldolase
FIU11_01710	COG2610	gluconate transmembrane transporter activity
FIU11_01715	COG3265	gluconokinase activity
FIU11_01720	COG0129	dihydroxy-acid dehydratase activity
FIU11_01725	COG1609	Transcriptional regulator
FIU11_01730	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FIU11_01740	COG2183	response to ionizing radiation
FIU11_01750	COG0596	Alpha beta hydrolase
FIU11_01755	COG1040	competence protein
FIU11_01760	COG0316	Belongs to the HesB IscA family
FIU11_01760	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
FIU11_01765	COG0494	nUDIX hydrolase
FIU11_01770	COG1218	3'(2'),5'-bisphosphate nucleotidase
FIU11_01780	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FIU11_01785	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FIU11_01790	COG3156	type II secretion system protein K
FIU11_01795	COG4795	General secretion pathway protein
FIU11_01800	COG2165	general secretion pathway protein
FIU11_01805	COG2165	general secretion pathway protein
FIU11_01810	COG2165	general secretion pathway protein
FIU11_01815	COG1459	type II secretion system
FIU11_01820	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FIU11_01830	COG3031	protein transport across the cell outer membrane
FIU11_01835	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
FIU11_01850	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
FIU11_01855	COG2982	Protein involved in outer membrane biogenesis
FIU11_01860	COG0456	acetyltransferase
FIU11_01865	COG1490	D-aminoacyl-tRNA deacylase activity
FIU11_01890	COG0174	glutamine synthetase
FIU11_01900	COG3852	Histidine kinase
FIU11_01905	COG2204	response regulator
FIU11_01910	COG5001	Diguanylate cyclase
FIU11_01910	COG3300	MHYT domain
FIU11_01915	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FIU11_01985	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FIU11_02000	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FIU11_02005	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
FIU11_02015	COG0514	ATP-dependent DNA helicase (RecQ)
FIU11_02020	COG0732	type I restriction modification DNA specificity domain
FIU11_02025	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
FIU11_02040	COG2003	Belongs to the UPF0758 family
FIU11_02090	COG0328	RNA-DNA hybrid ribonuclease activity
FIU11_02140	COG0534	Mate efflux family protein
FIU11_02150	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FIU11_02155	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FIU11_02160	COG2937	Belongs to the GPAT DAPAT family
FIU11_02165	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
FIU11_02170	COG3161	chorismate lyase activity
FIU11_02175	COG1580	Controls the rotational direction of flagella during chemotaxis
FIU11_02180	COG0705	Rhomboid family
FIU11_02185	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FIU11_02190	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FIU11_02195	COG2177	Part of the ABC transporter FtsEX involved in
FIU11_02200	COG2884	Cell division ATP-binding protein ftsE
FIU11_02205	COG0552	protein localization to endoplasmic reticulum
FIU11_02210	COG0742	ribosomal rna small subunit methyltransferase
FIU11_02220	COG2095	MarC family integral membrane protein
FIU11_02255	COG0783	Belongs to the Dps family
FIU11_02270	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FIU11_02275	COG0640	Transcriptional regulator
FIU11_02280	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
FIU11_02285	COG1280	lysine exporter protein (LysE YggA)
FIU11_02290	COG2267	carboxylic ester hydrolase activity
FIU11_02295	COG0561	phosphatase activity
FIU11_02315	COG2199	diguanylate cyclase activity
FIU11_02315	COG2200	EAL domain
FIU11_02315	COG3287	FIST C domain
FIU11_02320	COG1011	Hydrolase
FIU11_02325	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
FIU11_02340	COG0019	diaminopimelate decarboxylase activity
FIU11_02355	COG3072	Adenylate cyclase
FIU11_02370	COG2959	enzyme of heme biosynthesis
FIU11_02375	COG3071	HemY protein
FIU11_02380	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FIU11_02405	COG0218	Necessary for normal cell division and for the maintenance of normal septation
FIU11_02410	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FIU11_02410	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FIU11_02425	COG0084	hydrolase, TatD family'
FIU11_02430	COG0805	protein transport
FIU11_02435	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FIU11_02450	COG3165	ubiquinone biosynthetic process from chorismate
FIU11_02455	COG2226	methyltransferase
FIU11_02460	COG1322	Protein conserved in bacteria
FIU11_02485	COG2160	L-arabinose isomerase activity
FIU11_02495	COG1069	ribulokinase activity
FIU11_02500	COG1879	ABC-type sugar transport system periplasmic component
FIU11_02505	COG1129	ABC transporter
FIU11_02510	COG1172	Belongs to the binding-protein-dependent transport system permease family
FIU11_02515	COG1879	ABC-type sugar transport system periplasmic component
FIU11_02520	COG1129	ABC transporter
FIU11_02525	COG1172	Belongs to the binding-protein-dependent transport system permease family
FIU11_02530	COG1172	Belongs to the binding-protein-dependent transport system permease family
FIU11_02535	COG2081	HI0933 family
FIU11_02545	COG1528	Iron-storage protein
FIU11_02550	COG0589	response to stress
FIU11_02555	COG0697	spore germination
FIU11_02565	COG0742	ribosomal rna small subunit methyltransferase
FIU11_02570	COG5002	protein histidine kinase activity
FIU11_02570	COG5001	Diguanylate cyclase
FIU11_02575	COG1522	sequence-specific DNA binding
FIU11_02595	COG0006	proline dipeptidase activity
FIU11_02595	COG0006	proline dipeptidase activity
FIU11_02610	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
FIU11_02625	COG4175	Glycine betaine
FIU11_02630	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
FIU11_02635	COG2022	thiamine diphosphate biosynthetic process
FIU11_02645	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FIU11_02655	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
FIU11_02660	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FIU11_02665	COG2132	Multicopper oxidase
FIU11_02740	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FIU11_02745	COG1739	Uncharacterized protein family UPF0029
FIU11_02755	COG0183	Belongs to the thiolase family
FIU11_02760	COG0583	DNA-binding transcription factor activity
FIU11_02765	COG2814	Major facilitator Superfamily
FIU11_02775	COG0765	amino acid transport
FIU11_02785	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FIU11_02795	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
FIU11_02805	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FIU11_02810	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
FIU11_02820	COG0356	it plays a direct role in the translocation of protons across the membrane
FIU11_02825	COG3312	ion transport
FIU11_02830	COG1475	DNA binding
FIU11_02835	COG1192	Involved in chromosome partitioning
FIU11_02840	COG0357	Ribosomal RNA small subunit methyltransferase G
FIU11_02845	COG0445	tRNA wobble uridine modification
FIU11_02850	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
FIU11_02860	COG0706	membrane insertase activity
FIU11_02865	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
FIU11_02875	COG0230	Belongs to the bacterial ribosomal protein bL34 family
FIU11_02880	COG1126	abc transporter atp-binding protein
FIU11_02895	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
FIU11_02900	COG0592	DNA-directed DNA polymerase activity
FIU11_02910	COG0187	DNA topoisomerase II activity
FIU11_02920	COG0071	Belongs to the small heat shock protein (HSP20) family
FIU11_02925	COG3977	Valine--pyruvate aminotransferase
FIU11_02930	COG0751	glycine-tRNA ligase activity
FIU11_02935	COG0752	glycyl-tRNA synthetase alpha subunit
FIU11_02940	COG2119	membrane
FIU11_02960	COG2199	diguanylate cyclase activity
FIU11_02965	COG2199	diguanylate cyclase activity
FIU11_02975	COG0604	alcohol dehydrogenase
FIU11_02990	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FIU11_02995	COG3978	acetolactate synthase activity
FIU11_03005	COG0606	chelatase, subunit chli
FIU11_03010	COG0204	Acyl-transferase
FIU11_03015	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FIU11_03020	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FIU11_03030	COG3084	Protein conserved in bacteria
FIU11_03040	COG4326	sporulation control protein
FIU11_03045	COG1272	protein, Hemolysin III
FIU11_03055	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FIU11_03060	COG0569	domain protein
FIU11_03065	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FIU11_03065	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FIU11_03075	COG0242	peptide deformylase activity
FIU11_03085	COG0758	DNA mediated transformation
FIU11_03090	COG2922	Belongs to the Smg family
FIU11_03095	COG0551	DNA topoisomerase type I activity
FIU11_03100	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FIU11_03115	COG0408	coproporphyrinogen oxidase activity
FIU11_03120	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FIU11_03130	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FIU11_03175	COG0583	DNA-binding transcription factor activity
FIU11_03185	COG2960	long-chain fatty acid transporting porin activity
FIU11_03190	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FIU11_03195	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIU11_03200	COG1309	transcriptional regulator
FIU11_03240	COG4172	Belongs to the ABC transporter superfamily
FIU11_03245	COG0747	negative chemotaxis
FIU11_03255	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FIU11_03290	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FIU11_03295	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIU11_03310	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FIU11_03315	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FIU11_03350	COG0210	DNA helicase
FIU11_03355	COG0405	Gamma-glutamyltransferase
FIU11_03360	COG1280	lysine exporter protein (LysE YggA)
FIU11_03370	COG2962	Rard protein
FIU11_03375	COG0514	ATP-dependent DNA helicase (RecQ)
FIU11_03390	COG1132	(ABC) transporter
FIU11_03395	COG4774	siderophore transport
FIU11_03400	COG1120	ATPase activity
FIU11_03405	COG4607	ABC-type enterochelin transport system periplasmic component
FIU11_03440	COG1561	YicC-like family, N-terminal region
FIU11_03445	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
FIU11_03450	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
FIU11_03455	COG1560	Kdo2-lipid A biosynthetic process
FIU11_03460	COG1309	transcriptional regulator
FIU11_03485	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FIU11_03495	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FIU11_03510	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
FIU11_03515	COG0438	transferase activity, transferring glycosyl groups
FIU11_03520	COG0438	transferase activity, transferring glycosyl groups
FIU11_03525	COG0463	Glycosyl transferase, family 2
FIU11_03530	COG0859	PFAM glycosyl transferase family 9
FIU11_03540	COG0438	transferase activity, transferring glycosyl groups
FIU11_03545	COG1519	Transferase
FIU11_03550	COG0859	PFAM glycosyl transferase family 9
FIU11_03555	COG0859	PFAM glycosyl transferase family 9
FIU11_03565	COG1560	Kdo2-lipid A biosynthetic process
FIU11_03575	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FIU11_03580	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FIU11_03620	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FIU11_03625	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FIU11_03635	COG1216	Glycosyl transferase, family 2
FIU11_03645	COG1215	transferase activity, transferring glycosyl groups
FIU11_03655	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FIU11_03690	COG2843	Capsule synthesis protein
FIU11_03700	COG0438	transferase activity, transferring glycosyl groups
FIU11_03705	COG0438	transferase activity, transferring glycosyl groups
FIU11_03710	COG3562	capsule polysaccharide
FIU11_03715	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FIU11_03720	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
FIU11_03730	COG0741	lytic transglycosylase activity
FIU11_03750	COG1573	uracil-dna glycosylase
FIU11_03755	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FIU11_03760	COG3068	Protein conserved in bacteria
FIU11_03765	COG0668	transmembrane transport
FIU11_03770	COG1253	flavin adenine dinucleotide binding
FIU11_03775	COG0776	regulation of translation
FIU11_03785	COG0151	Belongs to the GarS family
FIU11_03790	COG0138	bifunctional purine biosynthesis protein purh
FIU11_03800	COG0789	Transcriptional regulator
FIU11_03805	COG0840	transmembrane signaling receptor activity
FIU11_03810	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
FIU11_03815	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FIU11_03820	COG2264	protein methyltransferase activity
FIU11_03825	COG0439	Biotin carboxylase
FIU11_03830	COG0511	ligase activity, forming carbon-carbon bonds
FIU11_03835	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FIU11_03840	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FIU11_03855	COG2814	Major facilitator Superfamily
FIU11_03860	COG0784	Response regulator, receiver
FIU11_03860	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FIU11_03860	COG2205	protein histidine kinase activity
FIU11_03860	COG2198	Histidine kinase
FIU11_03865	COG0248	Ppx GppA phosphatase
FIU11_03870	COG0513	Belongs to the DEAD box helicase family
FIU11_03875	COG3118	belongs to the thioredoxin family
FIU11_03880	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FIU11_03890	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FIU11_03935	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FIU11_03945	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FIU11_03955	COG1072	(Pantothenic acid kinase))
FIU11_03985	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FIU11_03990	COG0250	Participates in transcription elongation, termination and antitermination
FIU11_04000	COG0081	regulation of translation
FIU11_04005	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
FIU11_04010	COG0222	ribosome binding
FIU11_04015	COG0085	RNA polymerase activity
FIU11_04020	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
FIU11_04025	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
FIU11_04050	COG4942	peptidase
FIU11_04055	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
FIU11_04065	COG0840	transmembrane signaling receptor activity
FIU11_04070	COG0471	metal ion transport
FIU11_04070	COG0490	domain, Protein
FIU11_04075	COG0688	phosphatidylethanolamine metabolic process
FIU11_04080	COG1162	GTPase activity
FIU11_04135	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FIU11_04140	COG0802	atpase or kinase
FIU11_04150	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FIU11_04155	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
FIU11_04165	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FIU11_04170	COG0330	HflC and HflK could
FIU11_04175	COG0330	HflC and HflK could
FIU11_04180	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
FIU11_04185	COG2900	Belongs to the SlyX family
FIU11_04195	COG0545	Peptidyl-prolyl cis-trans isomerase
FIU11_04200	COG2964	Protein conserved in bacteria
FIU11_04210	COG2923	Belongs to the DsrF TusC family
FIU11_04215	COG2168	tRNA wobble position uridine thiolation
FIU11_04225	COG0049	tRNA binding
FIU11_04230	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FIU11_04240	COG2906	2 iron, 2 sulfur cluster binding
FIU11_04250	COG0360	Binds together with S18 to 16S ribosomal RNA
FIU11_04255	COG2965	DNA replication, synthesis of RNA primer
FIU11_04265	COG0359	binds to the 23S rRNA
FIU11_04275	COG0305	Participates in initiation and elongation during chromosome replication
FIU11_04280	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FIU11_04285	COG0432	Pfam Uncharacterised protein family UPF0047
FIU11_04290	COG0166	Belongs to the GPI family
FIU11_04300	COG0735	belongs to the Fur family
FIU11_04305	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FIU11_04325	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
FIU11_04335	COG0175	sulfate reduction
FIU11_04395	COG0646	methionine synthase
FIU11_04395	COG1410	methionine synthase
FIU11_04400	COG0527	aspartate kinase activity
FIU11_04405	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FIU11_04415	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FIU11_04430	COG0629	single-stranded DNA binding
FIU11_04435	COG2200	EAL domain
FIU11_04435	COG2199	diguanylate cyclase activity
FIU11_04460	COG3267	Type II secretory pathway component ExeA
FIU11_04460	COG3409	Peptidoglycan-binding domain 1 protein
FIU11_04470	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FIU11_04520	COG1077	Cell shape determining protein MreB Mrl
FIU11_04525	COG1792	Involved in formation and maintenance of cell shape
FIU11_04530	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
FIU11_04535	COG0424	maF-like protein
FIU11_04540	COG1530	ribonuclease E activity
FIU11_04545	COG3164	Protein of unknown function
FIU11_04550	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FIU11_04555	COG0312	modulator of DNA gyrase
FIU11_04575	COG0589	response to stress
FIU11_04595	COG0039	L-malate dehydrogenase activity
FIU11_04600	COG0531	amino acid
FIU11_04605	COG0142	geranyltranstransferase activity
FIU11_04610	COG0261	This protein binds to 23S rRNA in the presence of protein L20
FIU11_04615	COG0211	Belongs to the bacterial ribosomal protein bL27 family
FIU11_04620	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
FIU11_04625	COG2966	Psort location CytoplasmicMembrane, score
FIU11_04630	COG3610	response to peptide
FIU11_04640	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FIU11_04645	COG2967	ApaG domain
FIU11_04660	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FIU11_04665	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FIU11_04670	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FIU11_04720	COG0741	lytic transglycosylase activity
FIU11_04725	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
FIU11_04750	COG1194	a g-specific adenine glycosylase
FIU11_04755	COG0220	tRNA (guanine-N7-)-methyltransferase activity
FIU11_04765	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FIU11_04780	COG1872	DUF167
FIU11_04785	COG0762	integral membrane protein
FIU11_04790	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FIU11_04795	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FIU11_04810	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
FIU11_04815	COG1678	Uncharacterized ACR, COG1678
FIU11_04820	COG0189	ligase activity
FIU11_04825	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FIU11_04830	COG2356	endonuclease I
FIU11_04850	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FIU11_04855	COG0583	DNA-binding transcription factor activity
FIU11_04860	COG4771	TonB-dependent receptor
FIU11_04865	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FIU11_04870	COG0126	phosphoglycerate kinase activity
FIU11_04875	COG0191	fructose-bisphosphate aldolase activity
FIU11_04880	COG0668	transmembrane transport
FIU11_04890	COG1279	arginine transmembrane transporter activity
FIU11_04905	COG3706	GGDEF domain
FIU11_04910	COG0469	pyruvate kinase activity
FIU11_04915	COG1349	DNA-binding transcription factor activity
FIU11_04920	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FIU11_04925	COG0583	DNA-binding transcription factor activity
FIU11_04950	COG2239	Acts as a magnesium transporter
FIU11_05015	COG2003	Belongs to the UPF0758 family
FIU11_05030	COG3339	Conserved Protein
FIU11_05070	COG0582	viral genome integration into host DNA
FIU11_05080	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FIU11_05085	COG0358	DNA primase activity
FIU11_05090	COG1610	YqeY-like protein
FIU11_05095	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FIU11_05105	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
FIU11_05115	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
FIU11_05120	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FIU11_05125	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FIU11_05130	COG1968	undecaprenyl-diphosphatase activity
FIU11_05135	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
FIU11_05140	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
FIU11_05150	COG0585	pseudouridine synthase activity
FIU11_05155	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
FIU11_05160	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FIU11_05165	COG4942	peptidase
FIU11_05165	COG1388	LysM domain
FIU11_05170	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FIU11_05175	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
FIU11_05180	COG1546	Belongs to the CinA family
FIU11_05185	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
FIU11_05190	COG2137	regulation of response to DNA damage stimulus
FIU11_05195	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FIU11_05200	COG0527	aspartate kinase activity
FIU11_05250	COG3630	sodium ion export across plasma membrane
FIU11_05255	COG5016	pyruvate
FIU11_05255	COG0511	ligase activity, forming carbon-carbon bonds
FIU11_05260	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
FIU11_05265	COG1063	alcohol dehydrogenase
FIU11_05270	COG1238	metal cluster binding
FIU11_05275	COG0612	Peptidase, M16
FIU11_05280	COG2918	glutathione biosynthetic process
FIU11_05290	COG1854	S-ribosylhomocysteine lyase activity
FIU11_05295	COG4536	flavin adenine dinucleotide binding
FIU11_05300	COG4137	Cytochrome C assembly protein
FIU11_05305	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FIU11_05315	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
FIU11_05325	COG0335	large ribosomal subunit rRNA binding
FIU11_05330	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FIU11_05335	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FIU11_05340	COG3105	Protein conserved in bacteria
FIU11_05345	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FIU11_05355	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
FIU11_05360	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
FIU11_05370	COG0723	plastoquinol--plastocyanin reductase activity
FIU11_05375	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FIU11_05380	COG2857	Cytochrome c1
FIU11_05385	COG0625	glutathione transferase activity
FIU11_05390	COG2969	positive regulation of protein catabolic process
FIU11_05395	COG2823	Periplasmic or secreted lipoprotein
FIU11_05400	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FIU11_05405	COG0792	nuclease activity
FIU11_05410	COG3107	peptidoglycan biosynthetic process
FIU11_05415	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
FIU11_05425	COG0275	rRNA processing
FIU11_05430	COG3116	cell division
FIU11_05435	COG0768	penicillin binding
FIU11_05440	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FIU11_05445	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FIU11_05450	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FIU11_05455	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
FIU11_05460	COG0772	Belongs to the SEDS family
FIU11_05465	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
FIU11_05470	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FIU11_05475	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FIU11_05480	COG0849	cell division
FIU11_05485	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FIU11_05490	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
FIU11_05500	COG0653	protein targeting
FIU11_05505	COG0494	nUDIX hydrolase
FIU11_05515	COG0505	Belongs to the CarA family
FIU11_05520	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FIU11_05530	COG3479	Phenolic acid decarboxylase
FIU11_05535	COG0730	response to heat
FIU11_05540	COG0583	DNA-binding transcription factor activity
FIU11_05560	COG2860	membrane
FIU11_05565	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FIU11_05575	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FIU11_05585	COG0493	'glutamate synthase
FIU11_05590	COG0070	glutamate synthase
FIU11_05590	COG0067	glutamate synthase
FIU11_05590	COG0069	glutamate synthase activity
FIU11_05600	COG0070	glutamate synthase
FIU11_05600	COG0067	glutamate synthase
FIU11_05600	COG0069	glutamate synthase activity
FIU11_05605	COG1242	4 iron, 4 sulfur cluster binding
FIU11_05610	COG3706	GGDEF domain
FIU11_05610	COG5001	Diguanylate cyclase
FIU11_05610	COG4251	negative regulation of phosphorylation
FIU11_05610	COG2203	Gaf domain
FIU11_05615	COG5002	protein histidine kinase activity
FIU11_05615	COG2198	Histidine kinase
FIU11_05615	COG0784	Response regulator, receiver
FIU11_05625	COG0745	RESPONSE REGULATOR receiver
FIU11_05635	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FIU11_05650	COG0083	homoserine kinase activity
FIU11_05655	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
FIU11_05670	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
FIU11_05685	COG1115	amino acid carrier protein
FIU11_05695	COG0084	hydrolase, TatD family'
FIU11_05700	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FIU11_05710	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
FIU11_05715	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
FIU11_05720	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
FIU11_05725	COG0813	purine-nucleoside phosphorylase activity
FIU11_05735	COG0560	Phosphoserine phosphatase
FIU11_05745	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
FIU11_05750	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FIU11_05755	COG0583	DNA-binding transcription factor activity
FIU11_05765	COG0583	DNA-binding transcription factor activity
FIU11_05800	COG4964	Belongs to the GSP D family
FIU11_05855	COG2059	Chromate
FIU11_05860	COG2017	converts alpha-aldose to the beta-anomer
FIU11_05865	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FIU11_05895	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FIU11_05900	COG2171	N-acyltransferase activity
FIU11_05905	COG3141	response to X-ray
FIU11_05910	COG0583	DNA-binding transcription factor activity
FIU11_05920	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
FIU11_05925	COG1074	ATP-dependent DNA helicase activity
FIU11_05930	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FIU11_05940	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FIU11_05940	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
FIU11_05950	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
FIU11_05955	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FIU11_05960	COG2166	iron-sulfur cluster assembly
FIU11_05965	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FIU11_05970	COG0693	protein deglycase activity
FIU11_05975	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FIU11_05980	COG3248	Nucleoside-binding outer membrane protein
FIU11_05990	COG1595	DNA-templated transcription, initiation
FIU11_06000	COG0477	Major facilitator Superfamily
FIU11_06005	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FIU11_06015	COG2974	May be involved in recombination
FIU11_06020	COG0745	RESPONSE REGULATOR receiver
FIU11_06025	COG5002	protein histidine kinase activity
FIU11_06035	COG0248	Ppx GppA phosphatase
FIU11_06040	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
FIU11_06045	COG0573	inorganic phosphate transmembrane transporter activity
FIU11_06050	COG0581	inorganic phosphate transmembrane transporter activity
FIU11_06055	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FIU11_06060	COG0704	Plays a role in the regulation of phosphate uptake
FIU11_06070	COG3142	Participates in the control of copper homeostasis
FIU11_06075	COG0450	alkyl hydroperoxide reductase
FIU11_06080	COG0583	DNA-binding transcription factor activity
FIU11_06085	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FIU11_06100	COG0517	IMP dehydrogenase activity
FIU11_06105	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
FIU11_06110	COG0343	queuine tRNA-ribosyltransferase activity
FIU11_06115	COG1862	Preprotein translocase
FIU11_06120	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FIU11_06125	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FIU11_06130	COG1335	isochorismatase
FIU11_06135	COG0483	inositol monophosphate 1-phosphatase activity
FIU11_06140	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
FIU11_06145	COG1959	2 iron, 2 sulfur cluster binding
FIU11_06150	COG1104	cysteine desulfurase activity
FIU11_06155	COG0822	iron-sulfur transferase activity
FIU11_06170	COG0443	Heat shock 70 kDa protein
FIU11_06175	COG0633	Ferredoxin
FIU11_06180	COG2975	iron-sulfur cluster assembly
FIU11_06185	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FIU11_06205	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
FIU11_06210	COG0124	histidyl-tRNA synthetase
FIU11_06215	COG2976	Protein conserved in bacteria
FIU11_06220	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FIU11_06225	COG1160	GTP binding
FIU11_06245	COG0516	GMP reductase activity
FIU11_06245	COG0517	IMP dehydrogenase activity
FIU11_06250	COG0519	Catalyzes the synthesis of GMP from XMP
FIU11_06250	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FIU11_06255	COG0582	viral genome integration into host DNA
FIU11_06290	COG2203	Gaf domain
FIU11_06290	COG3706	GGDEF domain
FIU11_06290	COG5001	Diguanylate cyclase
FIU11_06290	COG4251	negative regulation of phosphorylation
FIU11_06325	COG0589	response to stress
FIU11_06330	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FIU11_06330	COG4651	solute:proton antiporter activity
FIU11_06400	COG3842	ATPase activity
FIU11_06410	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FIU11_06420	COG2182	Extracellular solute-binding protein
FIU11_06425	COG1175	transmembrane transport
FIU11_06430	COG3833	ABC-type maltose transport systems, permease component
FIU11_06450	COG1584	GPR1 FUN34 yaaH family protein
FIU11_06455	COG3710	Transcriptional regulator
FIU11_06465	COG3188	usher protein
FIU11_06470	COG3121	Chaperone
FIU11_06490	COG1115	amino acid carrier protein
FIU11_06500	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FIU11_06505	COG0583	DNA-binding transcription factor activity
FIU11_06515	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
FIU11_06515	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FIU11_06525	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
FIU11_06530	COG2867	negative regulation of translational initiation
FIU11_06535	COG2914	Belongs to the UPF0125 (RnfH) family
FIU11_06540	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FIU11_06545	COG0497	DNA recombination
FIU11_06550	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FIU11_06555	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FIU11_06565	COG0443	Heat shock 70 kDa protein
FIU11_06570	COG0484	heat shock protein binding
FIU11_06600	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
FIU11_06605	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
FIU11_06615	COG0583	DNA-binding transcription factor activity
FIU11_06620	COG0590	tRNA wobble adenosine to inosine editing
FIU11_06625	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
FIU11_06630	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FIU11_06630	COG0047	phosphoribosylformylglycinamidine synthase activity
FIU11_06655	COG0442	prolyl-tRNA aminoacylation
FIU11_06660	COG1720	tRNA m6t6A37 methyltransferase activity
FIU11_06665	COG0254	rRNA binding
FIU11_06670	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FIU11_06675	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
FIU11_06680	COG1671	Belongs to the UPF0178 family
FIU11_06705	COG3098	single-species biofilm formation
FIU11_06710	COG0564	pseudouridine synthase activity
FIU11_06715	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
FIU11_06720	COG0142	geranyltranstransferase activity
FIU11_06730	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FIU11_06740	COG0301	tRNA thio-modification
FIU11_06740	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FIU11_06745	COG0583	DNA-binding transcription factor activity
FIU11_06755	COG2363	Small membrane protein
FIU11_06765	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FIU11_06770	COG1611	Belongs to the LOG family
FIU11_06775	COG0745	RESPONSE REGULATOR receiver
FIU11_06775	COG3706	GGDEF domain
FIU11_06785	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FIU11_06785	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FIU11_06795	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
FIU11_06800	COG1464	Belongs to the NlpA lipoprotein family
FIU11_06805	COG2011	ABC-type metal ion transport system permease component
FIU11_06810	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FIU11_06815	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FIU11_06830	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FIU11_06830	COG1263	PTS System
FIU11_06835	COG0366	Alpha amylase catalytic
FIU11_06860	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIU11_06865	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FIU11_06885	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
FIU11_06890	COG0321	lipoyl(octanoyl) transferase activity
FIU11_06895	COG2921	Belongs to the UPF0250 family
FIU11_06900	COG1686	Belongs to the peptidase S11 family
FIU11_06905	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FIU11_06910	COG0772	Belongs to the SEDS family
FIU11_06915	COG0768	penicillin binding
FIU11_06920	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
FIU11_06925	COG0799	negative regulation of ribosome biogenesis
FIU11_06930	COG1466	dna polymerase III delta subunit
FIU11_06935	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
FIU11_06940	COG0495	leucyl-tRNA aminoacylation
FIU11_06945	COG2888	peptidyl-tyrosine sulfation
FIU11_06950	COG0815	Transfers the fatty acyl group on membrane lipoproteins
FIU11_06955	COG4535	Mg2 and Co2 transporter CorC
FIU11_06960	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
FIU11_06965	COG1702	phosphate starvation-inducible protein PhoH
FIU11_06970	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FIU11_06975	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FIU11_06980	COG2190	(PTS) system
FIU11_06990	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FIU11_06995	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FIU11_07000	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
FIU11_07005	COG3115	cell septum assembly
FIU11_07010	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
FIU11_07025	COG0789	Transcriptional regulator
FIU11_07035	COG0330	HflC and HflK could
FIU11_07040	COG3118	belongs to the thioredoxin family
FIU11_07045	COG0300	oxidoreductase activity
FIU11_07050	COG1090	epimerase
FIU11_07075	COG0622	Phosphoesterase
FIU11_07090	COG3710	Transcriptional regulator
FIU11_07095	COG0326	Molecular chaperone. Has ATPase activity
FIU11_07105	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
FIU11_07120	COG0367	asparagine synthase
FIU11_07125	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FIU11_07125	COG4651	solute:proton antiporter activity
FIU11_07130	COG1846	Transcriptional regulator
FIU11_07130	COG1940	carbohydrate kinase activity
FIU11_07135	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FIU11_07140	COG1263	PTS System
FIU11_07140	COG2190	(PTS) system
FIU11_07140	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FIU11_07145	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FIU11_07155	COG0101	tRNA pseudouridine synthase activity
FIU11_07165	COG0285	dihydrofolate synthase activity
FIU11_07170	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
FIU11_07175	COG1286	toxin biosynthetic process
FIU11_07180	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
FIU11_07185	COG2056	Na+-H+ antiporter family
FIU11_07190	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FIU11_07205	COG0346	lactoylglutathione lyase activity
FIU11_07210	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FIU11_07215	COG4660	Part of a membrane complex involved in electron transport
FIU11_07220	COG4659	FMN binding
FIU11_07225	COG4658	electron transport chain
FIU11_07230	COG4656	Part of a membrane complex involved in electron transport
FIU11_07235	COG2878	Part of a membrane complex involved in electron transport
FIU11_07240	COG4657	Part of a membrane complex involved in electron transport
FIU11_07245	COG1882	Formate acetyltransferase
FIU11_07260	COG0556	nucleotide-excision repair
FIU11_07265	COG2204	response regulator
FIU11_07270	COG2198	Histidine kinase
FIU11_07275	COG0391	Required for morphogenesis under gluconeogenic growth conditions
FIU11_07280	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FIU11_07285	COG0521	Mo-molybdopterin cofactor biosynthetic process
FIU11_07290	COG0315	cyclic pyranopterin monophosphate synthase activity
FIU11_07295	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
FIU11_07300	COG0314	molybdopterin synthase activity
FIU11_07305	COG3706	GGDEF domain
FIU11_07310	COG0517	IMP dehydrogenase activity
FIU11_07310	COG0516	GMP reductase activity
FIU11_07320	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
FIU11_07330	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FIU11_07330	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FIU11_07340	COG0572	uridine kinase
FIU11_07345	COG2982	Protein involved in outer membrane biogenesis
FIU11_07350	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
FIU11_07365	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FIU11_07370	COG2067	long-chain fatty acid transport protein
FIU11_07375	COG2067	long-chain fatty acid transport protein
FIU11_07390	COG0183	Belongs to the thiolase family
FIU11_07395	COG1250	3-hydroxyacyl-CoA dehydrogenase
FIU11_07395	COG1024	Enoyl-CoA hydratase
FIU11_07400	COG0778	Nitroreductase
FIU11_07405	COG0583	DNA-binding transcription factor activity
FIU11_07410	COG0745	RESPONSE REGULATOR receiver
FIU11_07420	COG2832	Protein of unknown function (DUF454)
FIU11_07425	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FIU11_07435	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
FIU11_07440	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
FIU11_07445	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FIU11_07470	COG2226	methyltransferase
FIU11_07475	COG0676	glucose-6-phosphate 1-epimerase activity
FIU11_07480	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FIU11_07485	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FIU11_07495	COG3139	Protein of unknown function (DUF1315)
FIU11_07500	COG0252	asparaginase activity
FIU11_07505	COG0616	signal peptide processing
FIU11_07510	COG1902	pentaerythritol trinitrate reductase activity
FIU11_07510	COG0446	pyridine nucleotide-disulphide oxidoreductase
FIU11_07515	COG0788	formyltetrahydrofolate deformylase activity
FIU11_07525	COG1199	ATP-dependent helicase activity
FIU11_07530	COG1214	PFAM Peptidase M22, glycoprotease
FIU11_07545	COG2267	carboxylic ester hydrolase activity
FIU11_07550	COG0318	PFAM AMP-dependent synthetase and ligase
FIU11_07555	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
FIU11_07565	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
FIU11_07570	COG2894	cell division
FIU11_07575	COG0850	regulation of cytokinetic process
FIU11_07580	COG3100	YcgL domain-containing protein
FIU11_07585	COG2951	lytic endotransglycosylase activity
FIU11_07595	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FIU11_07600	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
FIU11_07615	COG0732	type I restriction modification DNA specificity domain
FIU11_07620	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
FIU11_07660	COG4589	Belongs to the CDS family
FIU11_07670	COG3300	MHYT domain
FIU11_07670	COG5001	Diguanylate cyclase
FIU11_07680	COG3153	acetyltransferase
FIU11_07680	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FIU11_07690	COG1760	l-serine dehydratase
FIU11_07695	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
FIU11_07700	COG0745	RESPONSE REGULATOR receiver
FIU11_07705	COG2205	protein histidine kinase activity
FIU11_07720	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FIU11_07725	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FIU11_07730	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FIU11_07735	COG2204	response regulator
FIU11_07740	COG4191	Histidine kinase
FIU11_07750	COG0544	peptidyl-prolyl cis-trans isomerase activity
FIU11_07760	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
FIU11_07765	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FIU11_07770	COG0776	regulation of translation
FIU11_07775	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FIU11_07780	COG1555	photosystem II stabilization
FIU11_07785	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
FIU11_07790	COG0539	negative regulation of cytoplasmic translation
FIU11_07800	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
FIU11_07805	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
FIU11_07825	COG0583	DNA-binding transcription factor activity
FIU11_07835	COG0686	Belongs to the AlaDH PNT family
FIU11_07840	COG1522	sequence-specific DNA binding
FIU11_07845	COG1674	ftsk spoiiie
FIU11_07850	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
FIU11_07855	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
FIU11_07860	COG2186	Transcriptional regulator
FIU11_07875	COG0537	adenosine 5'-monophosphoramidase activity
FIU11_07905	COG1252	NADH dehydrogenase
FIU11_07920	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FIU11_07930	COG4591	ABC-type transport system involved in lipoprotein release permease component
FIU11_07935	COG1136	(ABC) transporter
FIU11_07940	COG4591	ABC-type transport system involved in lipoprotein release permease component
FIU11_07950	COG2333	competence protein COMEC
FIU11_07950	COG0658	competence protein
FIU11_07955	COG1132	(ABC) transporter
FIU11_07960	COG1663	tetraacyldisaccharide 4'-kinase activity
FIU11_07970	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
FIU11_07975	COG2719	SpoVR family
FIU11_07980	COG2718	Belongs to the UPF0229 family
FIU11_07985	COG2766	serine protein kinase
FIU11_07990	COG3713	MltA-interacting MipA family protein
FIU11_08005	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FIU11_08020	COG1882	Formate acetyltransferase
FIU11_08040	COG4215	(ABC) transporter
FIU11_08045	COG4160	amino acid transport
FIU11_08050	COG0708	Exodeoxyribonuclease III
FIU11_08065	COG3923	Primosomal replication protein n
FIU11_08070	COG1199	ATP-dependent helicase activity
FIU11_08075	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FIU11_08085	COG3012	SEC-C Motif Domain Protein
FIU11_08090	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
FIU11_08095	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FIU11_08100	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FIU11_08105	COG0215	cysteine-tRNA ligase activity
FIU11_08110	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
FIU11_08120	COG2255	four-way junction helicase activity
FIU11_08125	COG1271	oxidase subunit
FIU11_08130	COG1294	oxidase, subunit
FIU11_08135	COG4890	Cyd operon protein YbgT
FIU11_08145	COG0824	Thioesterase
FIU11_08150	COG0811	peptide transport
FIU11_08170	COG2885	chlorophyll binding
FIU11_08175	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
FIU11_08180	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
FIU11_08190	COG0784	Response regulator, receiver
FIU11_08190	COG5002	protein histidine kinase activity
FIU11_08205	COG0582	viral genome integration into host DNA
FIU11_08320	COG1349	DNA-binding transcription factor activity
FIU11_08325	COG1349	DNA-binding transcription factor activity
FIU11_08335	COG2222	sugar isomerase
FIU11_08340	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FIU11_08345	COG3715	PTS system
FIU11_08350	COG3716	PTS system mannose fructose sorbose family IID component
FIU11_08355	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FIU11_08365	COG0191	fructose-bisphosphate aldolase activity
FIU11_08375	COG3366	ferrous iron transmembrane transporter activity
FIU11_08380	COG0700	Nucleoside recognition
FIU11_08410	COG1960	acyl-CoA dehydrogenase activity
FIU11_08415	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FIU11_08425	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FIU11_08435	COG1737	Transcriptional regulator
FIU11_08440	COG0076	glutamate decarboxylase activity
FIU11_08450	COG2431	L-lysine efflux transmembrane transporter activity
FIU11_08460	COG3070	regulator of competence-specific genes
FIU11_08475	COG4191	Histidine kinase
FIU11_08475	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FIU11_08485	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
FIU11_08505	COG3940	Belongs to the glycosyl hydrolase 43 family
FIU11_08510	COG2211	Major facilitator Superfamily
FIU11_08515	COG1032	radical SAM domain protein
FIU11_08520	COG0488	(ABC) transporter
FIU11_08530	COG0346	lactoylglutathione lyase activity
FIU11_08545	COG0840	transmembrane signaling receptor activity
FIU11_08550	COG2771	luxR family
FIU11_08550	COG2200	EAL domain
FIU11_08565	COG0612	Peptidase, M16
FIU11_08580	COG0583	DNA-binding transcription factor activity
FIU11_08605	COG1987	bacterial-type flagellum assembly
FIU11_08615	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FIU11_08625	COG1815	bacterial-type flagellum-dependent cell motility
FIU11_08630	COG1558	bacterial-type flagellum-dependent cell motility
FIU11_08635	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
FIU11_08640	COG1749	Flagellar hook protein flgE
FIU11_08650	COG4786	Flagellar basal body rod
FIU11_08655	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
FIU11_08660	COG1706	bacterial-type flagellum-dependent cell motility
FIU11_08685	COG1677	Flagellar hook-basal body complex protein FliE
FIU11_08695	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FIU11_08725	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FIU11_08730	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FIU11_08735	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FIU11_08740	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
FIU11_08770	COG1191	sigma factor activity
FIU11_08775	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FIU11_08780	COG1360	Flagellar Motor Protein
FIU11_08790	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FIU11_08805	COG2350	Protein conserved in bacteria
FIU11_08810	COG1607	acyl-coa hydrolase
FIU11_08820	COG1301	dicarboxylic acid transport
FIU11_08830	COG0133	tryptophan synthase activity
FIU11_08835	COG0134	indole-3-glycerol-phosphate synthase activity
FIU11_08835	COG0135	phosphoribosylanthranilate isomerase activity
FIU11_08840	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FIU11_08845	COG0512	Glutamine amidotransferase of anthranilate synthase
FIU11_08850	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FIU11_08860	COG0613	PHP domain protein
FIU11_08875	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
FIU11_08885	COG4145	pantothenate transmembrane transporter activity
FIU11_08890	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FIU11_08895	COG0800	Aldolase
FIU11_08905	COG0009	L-threonylcarbamoyladenylate synthase
FIU11_08910	COG1187	pseudouridine synthase activity
FIU11_08925	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FIU11_08930	COG4988	ABC transporter
FIU11_08935	COG0492	ferredoxin-NADP+ reductase activity
FIU11_08965	COG2949	membrane
FIU11_08990	COG0640	Transcriptional regulator
FIU11_09005	COG0583	DNA-binding transcription factor activity
FIU11_09015	COG0281	malic enzyme
FIU11_09020	COG1643	Atp-dependent helicase
FIU11_09035	COG0583	DNA-binding transcription factor activity
FIU11_09050	COG1757	Na H antiporter
FIU11_09055	COG0174	glutamine synthetase
FIU11_09060	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
FIU11_09065	COG1396	sequence-specific DNA binding
FIU11_09065	COG1917	Cupin 2, conserved barrel domain protein
FIU11_09070	COG1012	belongs to the aldehyde dehydrogenase family
FIU11_09075	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FIU11_09085	COG2957	Belongs to the agmatine deiminase family
FIU11_09095	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FIU11_09120	COG2885	chlorophyll binding
FIU11_09135	COG0277	FAD linked oxidase domain protein
FIU11_09135	COG0247	lactate metabolic process
FIU11_09155	COG2986	histidine ammonia-lyase
FIU11_09165	COG0010	Belongs to the arginase family
FIU11_09170	COG1228	amidohydrolase
FIU11_09190	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FIU11_09200	COG0417	DNA replication proofreading
FIU11_09205	COG2197	response regulator
FIU11_09210	COG0322	excinuclease ABC activity
FIU11_09240	COG2133	pyrroloquinoline quinone binding
FIU11_09245	COG0745	RESPONSE REGULATOR receiver
FIU11_09245	COG3706	GGDEF domain
FIU11_09260	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
FIU11_09265	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FIU11_09265	COG0072	phenylalanine-tRNA ligase activity
FIU11_09270	COG0776	regulation of translation
FIU11_09280	COG0500	methyltransferase
FIU11_09290	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
FIU11_09310	COG5001	Diguanylate cyclase
FIU11_09315	COG0295	cytidine deaminase activity
FIU11_09320	COG1346	cytolysis
FIU11_09330	COG2925	Exonuclease
FIU11_09345	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FIU11_09350	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
FIU11_09355	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
FIU11_09370	COG2988	succinylglutamate desuccinylase activity
FIU11_09375	COG4139	cobalamin transport
FIU11_09380	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
FIU11_09450	COG4964	Belongs to the GSP D family
FIU11_09495	COG1609	Transcriptional regulator
FIU11_09505	COG2182	Extracellular solute-binding protein
FIU11_09510	COG1175	transmembrane transport
FIU11_09515	COG3833	ABC-type maltose transport systems, permease component
FIU11_09525	COG1874	Beta-galactosidase
FIU11_09540	COG0110	maltose O-acetyltransferase activity
FIU11_09565	COG0583	DNA-binding transcription factor activity
FIU11_09575	COG1451	nucleotide metabolic process
FIU11_09590	COG3063	Type IV pilus biogenesis stability protein PilW
FIU11_09595	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
FIU11_09615	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIU11_09630	COG3290	protein histidine kinase activity
FIU11_09635	COG4565	transcriptional regulatory protein
FIU11_09645	COG0835	chemotaxis
FIU11_09645	COG0784	Response regulator, receiver
FIU11_09650	COG1921	L-seryl-tRNASec selenium transferase activity
FIU11_09660	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FIU11_09665	COG0651	ATP synthesis coupled electron transport
FIU11_09670	COG0650	Formate hydrogenlyase subunit 4
FIU11_09675	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
FIU11_09675	COG3261	NADH dehydrogenase
FIU11_09680	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FIU11_09685	COG3260	NADH ubiquinone oxidoreductase 20
FIU11_09695	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
FIU11_09700	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FIU11_09710	COG3604	Transcriptional regulator
FIU11_09715	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FIU11_09725	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
FIU11_09730	COG0298	carbon dioxide binding
FIU11_09740	COG0309	Hydrogenase expression formation protein (HypE)
FIU11_09745	COG0375	protein maturation
FIU11_09750	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
FIU11_09755	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
FIU11_09760	COG2897	thiosulfate sulfurtransferase activity
FIU11_09775	COG0745	RESPONSE REGULATOR receiver
FIU11_09775	COG3706	GGDEF domain
FIU11_09820	COG0668	transmembrane transport
FIU11_09840	COG0745	RESPONSE REGULATOR receiver
FIU11_09845	COG5002	protein histidine kinase activity
FIU11_09850	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
FIU11_09875	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FIU11_09885	COG3391	amine dehydrogenase activity
FIU11_09890	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FIU11_09895	COG1254	Belongs to the acylphosphatase family
FIU11_09900	COG2920	part of a sulfur-relay system
FIU11_09905	COG0670	Belongs to the BI1 family
FIU11_09910	COG1126	abc transporter atp-binding protein
FIU11_09915	COG0765	amino acid transport
FIU11_09920	COG4597	amino acid ABC transporter
FIU11_09925	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FIU11_09935	COG0561	phosphatase activity
FIU11_09940	COG0602	queuosine metabolic process
FIU11_09945	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
FIU11_09950	COG3005	denitrification pathway
FIU11_09955	COG0243	molybdopterin cofactor binding
FIU11_09960	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
FIU11_09970	COG2999	glutathione oxidoreductase activity
FIU11_09995	COG3706	GGDEF domain
FIU11_10000	COG0443	Heat shock 70 kDa protein
FIU11_10015	COG3706	GGDEF domain
FIU11_10045	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FIU11_10050	COG1643	Atp-dependent helicase
FIU11_10065	COG3384	dioxygenase
FIU11_10085	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FIU11_10095	COG0446	pyridine nucleotide-disulphide oxidoreductase
FIU11_10110	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
FIU11_10115	COG4638	Rieske (2fe-2S)
FIU11_10120	COG0583	DNA-binding transcription factor activity
FIU11_10125	COG1414	Transcriptional regulator
FIU11_10145	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FIU11_10150	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FIU11_10155	COG1120	ATPase activity
FIU11_10160	COG0583	DNA-binding transcription factor activity
FIU11_10165	COG4774	siderophore transport
FIU11_10170	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
FIU11_10180	COG3501	Rhs element vgr protein
FIU11_10205	COG1115	amino acid carrier protein
FIU11_10215	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FIU11_10225	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FIU11_10245	COG2996	Protein conserved in bacteria
FIU11_10250	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FIU11_10250	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
FIU11_10255	COG3008	intermembrane lipid transfer
FIU11_10260	COG2995	paraquat-inducible protein a
FIU11_10265	COG1132	(ABC) transporter
FIU11_10270	COG1956	GAF domain-containing protein
FIU11_10275	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
FIU11_10295	COG0308	aminopeptidase N
FIU11_10305	COG2902	Dehydrogenase
FIU11_10310	COG0167	dihydroorotate dehydrogenase activity
FIU11_10320	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FIU11_10320	COG0116	Belongs to the methyltransferase superfamily
FIU11_10330	COG0488	(ABC) transporter
FIU11_10345	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FIU11_10350	COG1067	ATP-dependent peptidase activity
FIU11_10355	COG3120	sequence-specific DNA binding
FIU11_10390	COG3278	Belongs to the heme-copper respiratory oxidase family
FIU11_10405	COG2010	Cytochrome c
FIU11_10415	COG2217	Heavy metal translocating P-type atpase
FIU11_10430	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FIU11_10435	COG0589	response to stress
FIU11_10460	COG3842	ATPase activity
FIU11_10465	COG1176	ABC-type spermidine putrescine transport system, permease component I
FIU11_10470	COG1177	transmembrane transport
FIU11_10475	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FIU11_10480	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FIU11_10485	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FIU11_10490	COG0004	ammonium transporteR
FIU11_10505	COG0437	4 iron, 4 sulfur cluster binding
FIU11_10510	COG0243	molybdopterin cofactor binding
FIU11_10510	COG3383	formate dehydrogenase (NAD+) activity
FIU11_10520	COG3381	protein complex oligomerization
FIU11_10540	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FIU11_10555	COG3852	Histidine kinase
FIU11_10560	COG2204	response regulator
FIU11_10570	COG4662	Binding-protein-dependent transport system inner membrane component
FIU11_10575	COG3842	ATPase activity
FIU11_10580	COG0746	molybdenum cofactor guanylyltransferase activity
FIU11_10585	COG0303	'Molybdopterin
FIU11_10595	COG1940	carbohydrate kinase activity
FIU11_10615	COG0791	NLP P60 protein
FIU11_10635	COG0307	riboflavin synthase, alpha
FIU11_10650	COG1793	dna ligase
FIU11_10655	COG4667	esterase of the alpha-beta hydrolase superfamily
FIU11_10675	COG0848	biopolymer transport protein
FIU11_10680	COG0811	peptide transport
FIU11_10685	COG0811	peptide transport
FIU11_10695	COG3040	lipid binding
FIU11_10700	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FIU11_10715	COG1175	transmembrane transport
FIU11_10720	COG0395	ABC-type sugar transport system, permease component
FIU11_10725	COG3842	ATPase activity
FIU11_10730	COG1349	DNA-binding transcription factor activity
FIU11_10745	COG2731	YhcH YjgK YiaL family protein
FIU11_10765	COG0625	glutathione transferase activity
FIU11_10775	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
FIU11_10785	COG2200	EAL domain
FIU11_10790	COG2195	Cleaves the N-terminal amino acid of tripeptides
FIU11_10810	COG2814	Major facilitator Superfamily
FIU11_10815	COG1566	PFAM secretion protein HlyD family protein
FIU11_10835	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FIU11_10840	COG0372	Belongs to the citrate synthase family
FIU11_10845	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
FIU11_10855	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FIU11_10855	COG2169	Transcriptional regulator
FIU11_10890	COG1129	ABC transporter
FIU11_10900	COG3250	beta-galactosidase activity
FIU11_10910	COG2991	Protein conserved in bacteria
FIU11_10915	COG0778	Nitroreductase
FIU11_10920	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
FIU11_10935	COG4191	Histidine kinase
FIU11_10935	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FIU11_10940	COG0471	metal ion transport
FIU11_10960	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FIU11_10965	COG3283	Transcriptional regulator of aromatic amino acids metabolism
FIU11_10975	COG3106	COG3106 Predicted ATPase
FIU11_10990	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FIU11_11005	COG0494	nUDIX hydrolase
FIU11_11010	COG0814	amino acid
FIU11_11015	COG1760	l-serine dehydratase
FIU11_11020	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIU11_11025	COG1136	(ABC) transporter
FIU11_11025	COG0577	efflux transmembrane transporter activity
FIU11_11045	COG0720	synthase
FIU11_11055	COG0017	Asparaginyl-tRNA synthetase
FIU11_11070	COG1448	Aminotransferase
FIU11_11085	COG2176	DNA-directed DNA polymerase activity
FIU11_11090	COG0840	transmembrane signaling receptor activity
FIU11_11095	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FIU11_11100	COG1846	Transcriptional regulator
FIU11_11120	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FIU11_11135	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FIU11_11140	COG3108	Peptidase M15
FIU11_11145	COG2989	Protein conserved in bacteria
FIU11_11170	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FIU11_11185	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FIU11_11195	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FIU11_11225	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
FIU11_11230	COG3265	gluconokinase activity
FIU11_11245	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FIU11_11305	COG4181	ATPase activity
FIU11_11310	COG0534	Mate efflux family protein
FIU11_11315	COG0702	epimerase
FIU11_11325	COG2814	Major facilitator Superfamily
FIU11_11335	COG1061	Type III restriction enzyme res subunit
FIU11_11345	COG0745	RESPONSE REGULATOR receiver
FIU11_11350	COG0642	Histidine kinase
FIU11_11355	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
FIU11_11390	COG1278	Cold shock
FIU11_11395	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FIU11_11405	COG0814	amino acid
FIU11_11415	COG1131	(ABC) transporter
FIU11_11420	COG0842	Transport permease protein
FIU11_11430	COG3313	Fe-S protein
FIU11_11440	COG4134	Bacterial extracellular solute-binding protein
FIU11_11445	COG4135	transport system, permease component
FIU11_11450	COG4136	ATPase activity
FIU11_11455	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FIU11_11460	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FIU11_11470	COG0564	pseudouridine synthase activity
FIU11_11480	COG0733	neurotransmitter:sodium symporter activity
FIU11_11490	COG0626	cystathionine gamma-synthase activity
FIU11_11495	COG2818	Glycosylase
FIU11_11510	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIU11_11525	COG1842	Phage shock protein A
FIU11_11530	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
FIU11_11540	COG4168	peptide transport system, permease
FIU11_11545	COG4171	peptide transport system, permease
FIU11_11555	COG4172	Belongs to the ABC transporter superfamily
FIU11_11570	COG1227	inorganic diphosphatase activity
FIU11_11590	COG0243	molybdopterin cofactor binding
FIU11_11595	COG3005	denitrification pathway
FIU11_11600	COG4459	periplasmic nitrate reductase
FIU11_11605	COG0390	transport system, permease component
FIU11_11610	COG2116	formate transmembrane transporter activity
FIU11_11625	COG0583	DNA-binding transcription factor activity
FIU11_11630	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FIU11_11635	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FIU11_11640	COG1435	thymidine kinase activity
FIU11_11650	COG1801	Protein of unknown function DUF72
FIU11_11655	COG4106	trans-aconitate 2-methyltransferase activity
FIU11_11660	COG0500	methyltransferase
FIU11_11665	COG4067	protein conserved in archaea
FIU11_11665	COG0189	ligase activity
FIU11_11685	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
FIU11_11690	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
FIU11_11695	COG3006	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity
FIU11_11700	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FIU11_11705	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FIU11_11710	COG0745	RESPONSE REGULATOR receiver
FIU11_11715	COG3381	protein complex oligomerization
FIU11_11720	COG1609	Transcriptional regulator
FIU11_11725	COG3070	regulator of competence-specific genes
FIU11_11745	COG0297	glycogen (starch) synthase activity
FIU11_11750	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FIU11_11755	COG0745	RESPONSE REGULATOR receiver
FIU11_11755	COG3706	GGDEF domain
FIU11_11760	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FIU11_11770	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
FIU11_11780	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
FIU11_11785	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
FIU11_11790	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FIU11_11795	COG0542	response to heat
FIU11_11800	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FIU11_11805	COG1278	Cold shock
FIU11_11815	COG2223	nitrite transmembrane transporter activity
FIU11_11820	COG1695	Transcriptional regulator
FIU11_11830	COG1187	pseudouridine synthase activity
FIU11_11835	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
FIU11_11835	COG0140	phosphoribosyl-ATP diphosphatase activity
FIU11_11845	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
FIU11_11850	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FIU11_11855	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FIU11_11855	COG0131	Imidazoleglycerol-phosphate dehydratase
FIU11_11860	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FIU11_11865	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FIU11_11870	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
FIU11_11880	COG1757	Na H antiporter
FIU11_11885	COG2916	Histone family protein nucleoid-structuring protein H-NS
FIU11_11890	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FIU11_11895	COG0482	sulfurtransferase activity
FIU11_11900	COG2915	High frequency lysogenization protein hflD homolog
FIU11_11905	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FIU11_11925	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FIU11_11940	COG1028	Short-chain dehydrogenase reductase Sdr
FIU11_11950	COG0501	Belongs to the peptidase M48B family
FIU11_11955	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FIU11_11960	COG2226	methyltransferase
FIU11_11965	COG0156	8-amino-7-oxononanoate synthase activity
FIU11_11970	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
FIU11_11975	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FIU11_11985	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FIU11_11985	COG2146	nitrite reductase [NAD(P)H] activity
FIU11_11990	COG1116	anion transmembrane transporter activity
FIU11_11995	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FIU11_12000	COG1116	anion transmembrane transporter activity
FIU11_12000	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FIU11_12015	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FIU11_12015	COG1648	precorrin-2 dehydrogenase activity
FIU11_12020	COG0243	molybdopterin cofactor binding
FIU11_12030	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FIU11_12035	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FIU11_12040	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
FIU11_12045	COG0653	protein targeting
FIU11_12050	COG2165	general secretion pathway protein
FIU11_12060	COG3706	GGDEF domain
FIU11_12070	COG4120	Belongs to the binding-protein-dependent transport system permease family
FIU11_12080	COG3092	negative regulation of chromosome organization
FIU11_12085	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FIU11_12090	COG0280	phosphate acetyltransferase
FIU11_12090	COG0857	belongs to the CobB CobQ family
FIU11_12095	COG3174	membrane
FIU11_12100	COG0435	Glutathione S-transferase
FIU11_12115	COG0444	Belongs to the ABC transporter superfamily
FIU11_12120	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FIU11_12125	COG0601	transmembrane transport
FIU11_12155	COG0318	PFAM AMP-dependent synthetase and ligase
FIU11_12155	COG0204	Acyl-transferase
FIU11_12160	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FIU11_12165	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FIU11_12185	COG1216	Glycosyl transferase, family 2
FIU11_12190	COG2986	histidine ammonia-lyase
FIU11_12215	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FIU11_12225	COG1028	Short-chain dehydrogenase reductase Sdr
FIU11_12240	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FIU11_12250	COG2203	Gaf domain
FIU11_12250	COG5001	Diguanylate cyclase
FIU11_12250	COG4251	negative regulation of phosphorylation
FIU11_12250	COG3706	GGDEF domain
FIU11_12265	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FIU11_12265	COG1263	PTS System
FIU11_12275	COG0745	RESPONSE REGULATOR receiver
FIU11_12285	COG2207	Transcriptional regulator
FIU11_12285	COG3708	Transcriptional regulator
FIU11_12290	COG2814	Major facilitator Superfamily
FIU11_12295	COG1566	PFAM secretion protein HlyD family protein
FIU11_12300	COG1538	Outer membrane efflux protein
FIU11_12310	COG0747	negative chemotaxis
FIU11_12315	COG0601	transmembrane transport
FIU11_12320	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FIU11_12325	COG4172	Belongs to the ABC transporter superfamily
FIU11_12335	COG1741	Belongs to the pirin family
FIU11_12340	COG2723	6-phospho-beta-galactosidase activity
FIU11_12345	COG1609	Transcriptional regulator
FIU11_12355	COG1120	ATPase activity
FIU11_12360	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FIU11_12370	COG1629	transport
FIU11_12370	COG4774	siderophore transport
FIU11_12375	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FIU11_12380	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FIU11_12385	COG4592	Periplasmic binding protein
FIU11_12400	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FIU11_12400	COG3433	isochorismatase activity
FIU11_12400	COG2226	methyltransferase
FIU11_12405	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FIU11_12410	COG1028	Short-chain dehydrogenase reductase Sdr
FIU11_12415	COG1169	isochorismate synthase
FIU11_12420	COG1021	2,3-dihydroxybenzoate-AMP ligase
FIU11_12435	COG2249	NAD(P)H dehydrogenase (quinone) activity
FIU11_12450	COG3275	phosphorelay sensor kinase activity
FIU11_12455	COG3279	Response regulator of the LytR AlgR family
FIU11_12460	COG2223	nitrite transmembrane transporter activity
FIU11_12485	COG1294	oxidase, subunit
FIU11_12490	COG1271	oxidase subunit
FIU11_12495	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FIU11_12535	COG2194	sulfuric ester hydrolase activity
FIU11_12540	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FIU11_12545	COG1368	sulfuric ester hydrolase activity
FIU11_12550	COG0513	Belongs to the DEAD box helicase family
FIU11_12570	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIU11_12575	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FIU11_12610	COG2207	Transcriptional regulator
FIU11_12615	COG1881	PFAM PEBP family protein
FIU11_12640	COG2723	6-phospho-beta-galactosidase activity
FIU11_12645	COG2190	(PTS) system
FIU11_12645	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FIU11_12645	COG1263	PTS System
FIU11_12650	COG3711	transcriptional antiterminator
FIU11_12655	COG0679	Auxin Efflux Carrier
FIU11_12675	COG5002	protein histidine kinase activity
FIU11_12675	COG5001	Diguanylate cyclase
FIU11_12690	COG3126	Type III secretion system lipoprotein chaperone (YscW)
FIU11_12695	COG1946	Acyl-CoA thioesterase
FIU11_12700	COG1522	sequence-specific DNA binding
FIU11_12740	COG2204	response regulator
FIU11_12745	COG3047	cAMP biosynthetic process
FIU11_12745	COG2885	chlorophyll binding
FIU11_12765	COG1987	bacterial-type flagellum assembly
FIU11_12775	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FIU11_12790	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FIU11_12795	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
FIU11_12815	COG1580	Controls the rotational direction of flagella during chemotaxis
FIU11_12820	COG1191	sigma factor activity
FIU11_12825	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FIU11_12830	COG1360	Flagellar Motor Protein
FIU11_12840	COG3015	lipoprotein NlpE involved in copper resistance
FIU11_12860	COG1403	HNH endonuclease
FIU11_12885	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
FIU11_12915	COG4786	Flagellar basal body rod
FIU11_12915	COG1256	bacterial-type flagellum assembly
FIU11_12925	COG1706	bacterial-type flagellum-dependent cell motility
FIU11_12930	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
FIU11_12935	COG4786	Flagellar basal body rod
FIU11_12945	COG1749	Flagellar hook protein flgE
FIU11_12950	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
FIU11_12955	COG1558	bacterial-type flagellum-dependent cell motility
FIU11_12960	COG1815	bacterial-type flagellum-dependent cell motility
FIU11_12980	COG0741	lytic transglycosylase activity
FIU11_12980	COG1388	LysM domain
FIU11_12985	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
FIU11_13005	COG0477	Major facilitator Superfamily
FIU11_13010	COG2855	membrane
FIU11_13025	COG1441	menaquinone biosynthetic process
FIU11_13030	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FIU11_13040	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
FIU11_13050	COG0436	Aminotransferase
FIU11_13055	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
FIU11_13060	COG0232	Belongs to the dGTPase family. Type 2 subfamily
FIU11_13080	COG0616	signal peptide processing
FIU11_13085	COG1028	Short-chain dehydrogenase reductase Sdr
FIU11_13100	COG0587	DNA-directed DNA polymerase activity
FIU11_13105	COG0784	Response regulator, receiver
FIU11_13105	COG0835	chemotaxis
FIU11_13110	COG1940	carbohydrate kinase activity
FIU11_13115	COG0469	pyruvate kinase activity
FIU11_13120	COG4667	esterase of the alpha-beta hydrolase superfamily
FIU11_13135	COG0733	neurotransmitter:sodium symporter activity
FIU11_13150	COG1263	PTS System
FIU11_13150	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FIU11_13160	COG1263	PTS System
FIU11_13160	COG2190	(PTS) system
FIU11_13160	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FIU11_13165	COG0084	hydrolase, TatD family'
FIU11_13170	COG0470	DNA polymerase III
FIU11_13175	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FIU11_13180	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FIU11_13185	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FIU11_13190	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FIU11_13210	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FIU11_13215	COG0416	fatty acid biosynthetic process
FIU11_13225	COG1399	metal-binding, possibly nucleic acid-binding protein
FIU11_13230	COG0424	maF-like protein
FIU11_13235	COG0564	pseudouridine synthase activity
FIU11_13240	COG1530	ribonuclease E activity
FIU11_13250	COG0659	secondary active sulfate transmembrane transporter activity
FIU11_13260	COG1012	belongs to the aldehyde dehydrogenase family
FIU11_13260	COG1454	alcohol dehydrogenase
FIU11_13265	COG2095	MarC family integral membrane protein
FIU11_13270	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FIU11_13275	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FIU11_13280	COG1757	Na H antiporter
FIU11_13290	COG3081	Nucleoid-associated protein
FIU11_13300	COG3083	sulfuric ester hydrolase activity
FIU11_13315	COG2814	Major facilitator Superfamily
FIU11_13335	COG1448	Aminotransferase
FIU11_13345	COG0123	including yeast histone deacetylase and acetoin utilization protein
FIU11_13360	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FIU11_13400	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FIU11_13405	COG2159	amidohydrolase
FIU11_13410	COG0583	DNA-binding transcription factor activity
FIU11_13425	COG0667	Aldo Keto reductase
FIU11_13450	COG3384	dioxygenase
FIU11_13455	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FIU11_13460	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FIU11_13470	COG1609	Transcriptional regulator
FIU11_13500	COG2853	Lipoprotein
FIU11_13515	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FIU11_13520	COG1138	Cytochrome C-type biogenesis protein
FIU11_13525	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
FIU11_13530	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FIU11_13535	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FIU11_13540	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FIU11_13545	COG4133	protoheme IX ABC transporter activity
FIU11_13555	COG0835	chemotaxis
FIU11_13565	COG1192	Involved in chromosome partitioning
FIU11_13575	COG0643	Histidine kinase
FIU11_13575	COG2198	Histidine kinase
FIU11_13580	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
FIU11_13595	COG0455	bacterial-type flagellum organization
FIU11_13610	COG2062	phosphohistidine phosphatase, SixA
FIU11_13620	COG3102	Protein conserved in bacteria
FIU11_13625	COG0018	arginyl-trna synthetase
FIU11_13645	COG1918	ferrous iron import across plasma membrane
FIU11_13655	COG2207	Transcriptional regulator
FIU11_13660	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
FIU11_13665	COG1121	(ABC) transporter
FIU11_13670	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FIU11_13685	COG0508	dehydrogenase complex catalyzes the overall conversion of
FIU11_13690	COG0567	Dehydrogenase, E1 component
FIU11_13700	COG1053	succinate dehydrogenase
FIU11_13705	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
FIU11_13710	COG2009	succinate dehydrogenase
FIU11_13720	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FIU11_13730	COG0033	Phosphoglucomutase
FIU11_13735	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
FIU11_13740	COG0596	Alpha beta hydrolase
FIU11_13755	COG1346	cytolysis
FIU11_13760	COG1380	Effector of murein hydrolase LrgA
FIU11_13765	COG0583	DNA-binding transcription factor activity
FIU11_13775	COG0735	belongs to the Fur family
FIU11_13780	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FIU11_13785	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FIU11_13790	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FIU11_13795	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
FIU11_13795	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FIU11_13810	COG3101	peptidyl-lysine hydroxylation
FIU11_13815	COG2860	membrane
FIU11_13820	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
FIU11_13825	COG2890	protein-(glutamine-N5) methyltransferase activity
FIU11_13845	COG1987	bacterial-type flagellum assembly
FIU11_13895	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FIU11_13905	COG1677	Flagellar hook-basal body complex protein FliE
FIU11_13910	COG2204	response regulator
FIU11_13915	COG4191	Histidine kinase
FIU11_13920	COG2204	response regulator
FIU11_13925	COG1516	flagellar protein fliS
FIU11_13935	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
FIU11_13940	COG1334	flagellar protein FlaG
FIU11_13945	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FIU11_13960	COG2837	iron assimilation
FIU11_13980	COG0517	IMP dehydrogenase activity
FIU11_13995	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
FIU11_14000	COG1085	galactose-1-phosphate uridylyltransferase
FIU11_14005	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FIU11_14015	COG1393	Belongs to the ArsC family
FIU11_14020	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FIU11_14025	COG1876	peptidase activity
FIU11_14035	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
FIU11_14040	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FIU11_14045	COG2716	regulation of RNA biosynthetic process
FIU11_14050	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FIU11_14070	COG4783	chaperone-mediated protein folding
FIU11_14075	COG1393	Belongs to the ArsC family
FIU11_14095	COG2233	PERMEase
FIU11_14100	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FIU11_14105	COG0737	Belongs to the 5'-nucleotidase family
FIU11_14115	COG2912	Transglutaminase-like superfamily
FIU11_14120	COG3094	Invasion gene expression up-regulator, SirB
FIU11_14125	COG2890	protein-(glutamine-N5) methyltransferase activity
FIU11_14135	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
FIU11_14140	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
FIU11_14150	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FIU11_14155	COG0193	aminoacyl-tRNA hydrolase activity
FIU11_14265	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FIU11_14270	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FIU11_14280	COG1705	Flagellar rod assembly protein muramidase FlgJ
FIU11_14280	COG3951	Flagellar rod assembly protein muramidase FlgJ
FIU11_14285	COG1706	bacterial-type flagellum-dependent cell motility
FIU11_14290	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
FIU11_14295	COG4786	Flagellar basal body rod
FIU11_14300	COG4787	bacterial-type flagellum-dependent cell motility
FIU11_14305	COG1749	Flagellar hook protein flgE
FIU11_14310	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
FIU11_14315	COG1558	bacterial-type flagellum-dependent cell motility
FIU11_14320	COG1815	bacterial-type flagellum-dependent cell motility
FIU11_14325	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FIU11_14330	COG0835	chemotaxis
FIU11_14330	COG0784	Response regulator, receiver
FIU11_14340	COG2747	anti-sigma28 factor FlgM
FIU11_14380	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FIU11_14385	COG2217	Heavy metal translocating P-type atpase
FIU11_14385	COG2608	mercury ion transmembrane transporter activity
FIU11_14415	COG2840	Smr protein MutS2
FIU11_14420	COG1187	pseudouridine synthase activity
FIU11_14425	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
FIU11_14430	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
FIU11_14435	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FIU11_14440	COG0121	glutamine amidotransferase
FIU11_14445	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FIU11_14450	COG1960	acyl-CoA dehydrogenase activity
FIU11_14460	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FIU11_14465	COG0328	RNA-DNA hybrid ribonuclease activity
FIU11_14470	COG2226	methyltransferase
FIU11_14475	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FIU11_14480	COG0741	lytic transglycosylase activity
FIU11_14480	COG1388	LysM domain
FIU11_14495	COG0347	Belongs to the P(II) protein family
FIU11_14505	COG0037	tRNA processing
FIU11_14510	COG0825	malonyl-CoA metabolic process
FIU11_14515	COG0587	DNA-directed DNA polymerase activity
FIU11_14520	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
FIU11_14535	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FIU11_14540	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FIU11_14545	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
FIU11_14555	COG0750	zinc metalloprotease
FIU11_14560	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FIU11_14565	COG0575	Belongs to the CDS family
FIU11_14570	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FIU11_14575	COG0233	cytoplasmic translational termination
FIU11_14595	COG0024	Methionine aminopeptidase
FIU11_14600	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
FIU11_14610	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FIU11_14615	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
FIU11_14620	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FIU11_14640	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FIU11_14640	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FIU11_14645	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
FIU11_14650	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
FIU11_14670	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
FIU11_14675	COG2252	PERMEase
FIU11_14680	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FIU11_14690	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FIU11_14700	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FIU11_14705	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FIU11_14710	COG2195	Cleaves the N-terminal amino acid of tripeptides
FIU11_14715	COG4067	protein conserved in archaea
FIU11_14715	COG0189	ligase activity
FIU11_14720	COG0189	ligase activity
FIU11_14730	COG0733	neurotransmitter:sodium symporter activity
FIU11_14735	COG4251	negative regulation of phosphorylation
FIU11_14735	COG3706	GGDEF domain
FIU11_14735	COG5001	Diguanylate cyclase
FIU11_14735	COG2203	Gaf domain
FIU11_14745	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FIU11_14760	COG1477	protein flavinylation
FIU11_14765	COG2871	sodium ion transport
FIU11_14770	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FIU11_14775	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FIU11_14785	COG1805	sodium ion transport
FIU11_14790	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FIU11_14795	COG0271	Belongs to the BolA IbaG family
FIU11_14810	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FIU11_14870	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FIU11_14875	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FIU11_14880	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FIU11_14885	COG0590	tRNA wobble adenosine to inosine editing
FIU11_14895	COG0542	response to heat
FIU11_14905	COG0564	pseudouridine synthase activity
FIU11_14910	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FIU11_14915	COG0741	lytic transglycosylase activity
FIU11_14920	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FIU11_14925	COG1605	Chorismate mutase
FIU11_14925	COG0077	Prephenate dehydratase
FIU11_14930	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FIU11_14935	COG5001	Diguanylate cyclase
FIU11_14940	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
FIU11_14955	COG0488	(ABC) transporter
FIU11_14965	COG0287	Prephenate dehydrogenase
FIU11_14965	COG1605	Chorismate mutase
FIU11_14970	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FIU11_14975	COG3275	phosphorelay sensor kinase activity
FIU11_14980	COG3279	Response regulator of the LytR AlgR family
FIU11_14990	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
FIU11_14995	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
FIU11_15010	COG1966	Carbon starvation protein
FIU11_15015	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
FIU11_15020	COG1047	Peptidyl-prolyl cis-trans
FIU11_15025	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
FIU11_15030	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
FIU11_15035	COG0196	riboflavin kinase activity
FIU11_15040	COG0728	peptidoglycan biosynthetic process
FIU11_15050	COG0640	Transcriptional regulator
FIU11_15055	COG0583	DNA-binding transcription factor activity
FIU11_15060	COG1283	sodium-dependent phosphate transmembrane transporter activity
FIU11_15065	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
FIU11_15075	COG0730	response to heat
FIU11_15090	COG3066	DNA modification
FIU11_15100	COG0667	Aldo Keto reductase
FIU11_15110	COG2204	response regulator
FIU11_15115	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FIU11_15130	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
FIU11_15135	COG0513	Belongs to the DEAD box helicase family
FIU11_15140	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
FIU11_15160	COG3153	acetyltransferase
FIU11_15185	COG0534	Mate efflux family protein
FIU11_15205	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
FIU11_15210	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FIU11_15215	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
FIU11_15220	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
FIU11_15225	COG0195	Participates in both transcription termination and antitermination
FIU11_15230	COG0779	Required for maturation of 30S ribosomal subunits
FIU11_15245	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FIU11_15250	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FIU11_15255	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FIU11_15260	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FIU11_15270	COG1534	Rna-binding protein
FIU11_15275	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FIU11_15280	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FIU11_15285	COG2027	D-alanyl-D-alanine carboxypeptidase
FIU11_15290	COG2239	Acts as a magnesium transporter
FIU11_15300	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FIU11_15305	COG0739	heme binding
FIU11_15320	COG0316	Belongs to the HesB IscA family
FIU11_15325	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
FIU11_15330	COG0628	permease
FIU11_15335	COG2813	Specifically methylates the guanine in position
FIU11_15340	COG2205	protein histidine kinase activity
FIU11_15340	COG0784	Response regulator, receiver
FIU11_15345	COG0747	negative chemotaxis
FIU11_15355	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FIU11_15360	COG0444	Belongs to the ABC transporter superfamily
FIU11_15365	COG4608	Belongs to the ABC transporter superfamily
FIU11_15375	COG2971	BadF BadG BcrA BcrD
FIU11_15390	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FIU11_15395	COG3842	ATPase activity
FIU11_15405	COG1840	ABC-type Fe3 transport system, periplasmic component
FIU11_15410	COG0004	ammonium transporteR
FIU11_15415	COG0347	Belongs to the P(II) protein family
FIU11_15420	COG3112	Uncharacterised protein family (UPF0231)
FIU11_15425	COG1049	propionate catabolic process, 2-methylcitrate cycle
FIU11_15430	COG1752	Esterase of the alpha-beta hydrolase superfamily
FIU11_15435	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FIU11_15440	COG1643	Atp-dependent helicase
FIU11_15445	COG1489	DNA binding
FIU11_15450	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FIU11_15455	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FIU11_15465	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FIU11_15470	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
FIU11_15475	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
FIU11_15480	COG0842	Transport permease protein
FIU11_15485	COG1131	(ABC) transporter
FIU11_15490	COG0288	reversible hydration of carbon dioxide
FIU11_15505	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FIU11_15510	COG0508	dehydrogenase complex catalyzes the overall conversion of
FIU11_15515	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
FIU11_15520	COG2186	Transcriptional regulator
FIU11_15525	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FIU11_15530	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FIU11_15535	COG4974	Belongs to the 'phage' integrase family
FIU11_15540	COG0716	FMN binding
FIU11_15560	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FIU11_15565	COG1459	type II secretion system
FIU11_15575	COG0237	dephospho-CoA kinase activity
FIU11_15580	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
FIU11_15585	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
FIU11_15595	COG0187	DNA topoisomerase II activity
FIU11_15600	COG3150	esterase
FIU11_15610	COG3151	Protein conserved in bacteria
FIU11_15615	COG0494	nUDIX hydrolase
FIU11_15620	COG1538	Outer membrane efflux protein
FIU11_15625	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
FIU11_15625	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
FIU11_15630	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
FIU11_15640	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FIU11_15645	COG3025	triphosphatase activity
FIU11_15650	COG1392	Phosphate transport regulator
FIU11_15655	COG0306	phosphate transporter
FIU11_15660	COG4991	sh3 domain protein
FIU11_15670	COG3409	Peptidoglycan-binding domain 1 protein
FIU11_15670	COG3267	Type II secretory pathway component ExeA
FIU11_15675	COG0617	tRNA 3'-terminal CCA addition
FIU11_15680	COG0148	phosphopyruvate hydratase activity
FIU11_15685	COG0504	CTP synthase activity
FIU11_15690	COG3956	TIGRFAM MazG family protein
FIU11_15695	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FIU11_15700	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FIU11_15715	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FIU11_15720	COG1381	Involved in DNA repair and RecF pathway recombination
FIU11_15725	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FIU11_15735	COG0681	Belongs to the peptidase S26 family
FIU11_15750	COG3842	ATPase activity
FIU11_15770	COG2866	Carboxypeptidase
FIU11_15795	COG4166	transmembrane transport
FIU11_15800	COG4174	ABC transporter (Permease)
FIU11_15805	COG4239	(ABC) transporter, permease
FIU11_15810	COG4172	Belongs to the ABC transporter superfamily
FIU11_15815	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FIU11_15830	COG2205	protein histidine kinase activity
FIU11_15830	COG0784	Response regulator, receiver
FIU11_15835	COG2203	Gaf domain
FIU11_15835	COG3706	GGDEF domain
FIU11_15835	COG5001	Diguanylate cyclase
FIU11_15835	COG4251	negative regulation of phosphorylation
FIU11_15845	COG2199	diguanylate cyclase activity
FIU11_15860	COG2501	S4 domain
FIU11_15905	COG3710	Transcriptional regulator
FIU11_15940	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FIU11_15945	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FIU11_15945	COG2207	Transcriptional regulator
FIU11_15955	COG2233	PERMEase
FIU11_15985	COG0765	amino acid transport
FIU11_15990	COG0765	amino acid transport
FIU11_16020	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FIU11_16040	COG0402	S-adenosylhomocysteine deaminase activity
FIU11_16045	COG2351	hydroxyisourate hydrolase activity
FIU11_16085	COG1129	ABC transporter
FIU11_16090	COG1309	transcriptional regulator
FIU11_16100	COG3706	GGDEF domain
FIU11_16110	COG2199	diguanylate cyclase activity
FIU11_16125	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
FIU11_16130	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
FIU11_16170	COG0023	Translation Initiation Factor
FIU11_16185	COG1181	Belongs to the D-alanine--D-alanine ligase family
FIU11_16195	COG0045	succinate-CoA ligase (ADP-forming) activity
FIU11_16195	COG1042	CoA-binding domain protein
FIU11_16195	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FIU11_16200	COG0583	DNA-binding transcription factor activity
FIU11_16205	COG4771	TonB-dependent receptor
FIU11_16205	COG1629	transport
FIU11_16215	COG4533	DNA binding
FIU11_16225	COG2050	protein possibly involved in aromatic compounds catabolism
FIU11_16230	COG4783	chaperone-mediated protein folding
FIU11_16235	COG2824	Alkylphosphonate utilization operon protein PhnA
FIU11_16250	COG0737	Belongs to the 5'-nucleotidase family
FIU11_16255	COG3593	DNA synthesis involved in DNA repair
FIU11_16265	COG0583	DNA-binding transcription factor activity
FIU11_16270	COG2116	formate transmembrane transporter activity
FIU11_16280	COG3038	cytochrome b561
FIU11_16305	COG5001	Diguanylate cyclase
FIU11_16315	COG0243	molybdopterin cofactor binding
FIU11_16320	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FIU11_16325	COG5002	protein histidine kinase activity
FIU11_16325	COG0784	Response regulator, receiver
FIU11_16325	COG2205	protein histidine kinase activity
FIU11_16330	COG3437	response regulator, receiver
FIU11_16340	COG2207	Transcriptional regulator
FIU11_16345	COG1064	alcohol dehydrogenase
FIU11_16350	COG1028	Short-chain dehydrogenase reductase Sdr
FIU11_16355	COG1846	Transcriptional regulator
FIU11_16360	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
FIU11_16365	COG0523	cobalamin synthesis protein
FIU11_16370	COG0038	chloride channel
FIU11_16380	COG0156	8-amino-7-oxononanoate synthase activity
FIU11_16385	COG0784	Response regulator, receiver
FIU11_16385	COG2205	protein histidine kinase activity
FIU11_16390	COG0419	ATPase involved in DNA repair
FIU11_16395	COG0420	3'-5' exonuclease activity
FIU11_16400	COG1609	Transcriptional regulator
FIU11_16405	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FIU11_16405	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FIU11_16410	COG1105	Belongs to the carbohydrate kinase PfkB family
FIU11_16415	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
FIU11_16415	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FIU11_16415	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FIU11_16420	COG0189	ligase activity
FIU11_16420	COG4067	protein conserved in archaea
FIU11_16430	COG0602	queuosine metabolic process
FIU11_16435	COG1328	CTP reductase activity
FIU11_16480	COG0454	-acetyltransferase
FIU11_16490	COG2207	Transcriptional regulator
FIU11_16500	COG1073	alpha beta
FIU11_16505	COG1073	alpha beta
FIU11_16510	COG1902	pentaerythritol trinitrate reductase activity
FIU11_16550	COG1566	PFAM secretion protein HlyD family protein
FIU11_16555	COG0583	DNA-binding transcription factor activity
FIU11_16560	COG1280	lysine exporter protein (LysE YggA)
FIU11_16565	COG0745	RESPONSE REGULATOR receiver
FIU11_16575	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FIU11_16580	COG0840	transmembrane signaling receptor activity
FIU11_16595	COG0545	Peptidyl-prolyl cis-trans isomerase
FIU11_16600	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FIU11_16605	COG0840	transmembrane signaling receptor activity
FIU11_16610	COG2814	Major facilitator Superfamily
FIU11_16625	COG3069	C4-dicarboxylate transmembrane transporter activity
FIU11_16630	COG2197	response regulator
FIU11_16635	COG3850	Histidine kinase
FIU11_16650	COG0243	molybdopterin cofactor binding
FIU11_16660	COG3005	denitrification pathway
FIU11_16670	COG4166	transmembrane transport
FIU11_16690	COG0183	Belongs to the thiolase family
FIU11_16700	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FIU11_16705	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FIU11_16725	COG3706	GGDEF domain
FIU11_16730	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FIU11_16740	COG2207	Transcriptional regulator
FIU11_16745	COG1979	alcohol dehydrogenase
FIU11_16755	COG2205	protein histidine kinase activity
FIU11_16755	COG2198	Histidine kinase
FIU11_16755	COG0784	Response regulator, receiver
FIU11_16760	COG1879	ABC-type sugar transport system periplasmic component
FIU11_16765	COG1803	Methylglyoxal synthase
FIU11_16770	COG1335	isochorismatase
FIU11_16775	COG0210	DNA helicase
FIU11_16815	COG1289	transmembrane transporter activity
FIU11_16830	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
FIU11_16835	COG4149	molybdate abc transporter
FIU11_16840	COG0725	ABC transporter, periplasmic molybdate-binding protein
FIU11_16845	COG1492	cobalamin metabolic process
FIU11_16865	COG0784	Response regulator, receiver
FIU11_16865	COG5002	protein histidine kinase activity
FIU11_16870	COG1879	ABC-type sugar transport system periplasmic component
FIU11_16875	COG2827	Endonuclease containing a URI domain
FIU11_16895	COG4974	Belongs to the 'phage' integrase family
FIU11_17075	COG4695	Portal protein
FIU11_17115	COG4386	tail sheath protein
FIU11_17195	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FIU11_17200	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FIU11_17205	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FIU11_17210	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
FIU11_17215	COG0247	lactate metabolic process
FIU11_17230	COG0438	transferase activity, transferring glycosyl groups
FIU11_17230	COG0297	glycogen (starch) synthase activity
FIU11_17235	COG0438	transferase activity, transferring glycosyl groups
FIU11_17270	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FIU11_17285	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FIU11_17290	COG3118	belongs to the thioredoxin family
FIU11_17295	COG2814	Major facilitator Superfamily
FIU11_17320	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FIU11_17320	COG1648	precorrin-2 dehydrogenase activity
FIU11_17330	COG2146	nitrite reductase [NAD(P)H] activity
FIU11_17335	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FIU11_17355	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FIU11_17360	COG4160	amino acid transport
FIU11_17365	COG4215	(ABC) transporter
FIU11_17370	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FIU11_17375	COG1126	abc transporter atp-binding protein
FIU11_17415	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FIU11_17420	COG1120	ATPase activity
FIU11_17430	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FIU11_17440	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FIU11_17455	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FIU11_17465	COG1070	Carbohydrate kinase
FIU11_17475	COG2390	Transcriptional regulator
FIU11_17490	COG1294	oxidase, subunit
FIU11_17495	COG1271	oxidase subunit
FIU11_17505	COG3781	membrane
FIU11_17510	COG0583	DNA-binding transcription factor activity
FIU11_17515	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FIU11_17530	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FIU11_17540	COG0330	HflC and HflK could
FIU11_17560	COG2207	Transcriptional regulator
FIU11_17560	COG1917	Cupin 2, conserved barrel domain protein
FIU11_17570	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FIU11_17585	COG2207	Transcriptional regulator
FIU11_17585	COG1609	Transcriptional regulator
FIU11_17590	COG4604	ABC transporter, ATP-binding protein
FIU11_17595	COG4605	iron ion homeostasis
FIU11_17600	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FIU11_17610	COG0121	glutamine amidotransferase
FIU11_17620	COG4412	M6 family metalloprotease domain protein
FIU11_17620	COG3291	Pkd domain containing protein
FIU11_17625	COG5380	lipid catabolic process
FIU11_17630	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
FIU11_17635	COG0840	transmembrane signaling receptor activity
FIU11_17640	COG1522	sequence-specific DNA binding
FIU11_17660	COG2814	Major facilitator Superfamily
FIU11_17670	COG0840	transmembrane signaling receptor activity
FIU11_17690	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FIU11_17695	COG3279	Response regulator of the LytR AlgR family
FIU11_17700	COG3275	phosphorelay sensor kinase activity
FIU11_17705	COG4989	oxidoreductase activity
FIU11_17720	COG0366	Alpha amylase catalytic
FIU11_17725	COG3227	Zinc metalloprotease (Elastase)
FIU11_17730	COG3047	cAMP biosynthetic process
FIU11_17740	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FIU11_17750	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
FIU11_17765	COG1482	cell wall glycoprotein biosynthetic process
FIU11_17770	COG0840	transmembrane signaling receptor activity
FIU11_17775	COG4580	involved in the transport of maltose and maltodextrins
FIU11_17780	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
FIU11_17785	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
FIU11_17795	COG1609	Transcriptional regulator
FIU11_17810	COG5578	integral membrane protein
FIU11_17815	COG0395	ABC-type sugar transport system, permease component
FIU11_17820	COG1175	transmembrane transport
FIU11_17835	COG0351	phosphomethylpyrimidine kinase
FIU11_17840	COG1116	anion transmembrane transporter activity
FIU11_17845	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FIU11_17850	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FIU11_17855	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
FIU11_17865	COG1132	(ABC) transporter
FIU11_17870	COG1132	(ABC) transporter
FIU11_17880	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FIU11_17885	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FIU11_17905	COG1278	Cold shock
FIU11_17910	COG1063	alcohol dehydrogenase
FIU11_17915	COG0156	8-amino-7-oxononanoate synthase activity
FIU11_17920	COG1012	belongs to the aldehyde dehydrogenase family
FIU11_17925	COG3284	Transcriptional regulator
FIU11_17935	COG0346	lactoylglutathione lyase activity
FIU11_17955	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
FIU11_17965	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FIU11_17970	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FIU11_17975	COG0363	glucosamine-6-phosphate deaminase activity
FIU11_17980	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
FIU11_18010	COG0646	methionine synthase
FIU11_18010	COG1410	methionine synthase
FIU11_18015	COG0531	amino acid
FIU11_18025	COG1929	Belongs to the glycerate kinase type-1 family
FIU11_18030	COG2610	gluconate transmembrane transporter activity
FIU11_18035	COG3835	regulator
FIU11_18040	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FIU11_18045	COG4533	DNA binding
FIU11_18100	COG3188	usher protein
FIU11_18105	COG3121	Chaperone
FIU11_18115	COG3047	cAMP biosynthetic process
FIU11_18115	COG2885	chlorophyll binding
FIU11_18125	COG1566	PFAM secretion protein HlyD family protein
FIU11_18140	COG1686	Belongs to the peptidase S11 family
FIU11_18150	COG0765	amino acid transport
FIU11_18165	COG1522	sequence-specific DNA binding
FIU11_18170	COG0010	Belongs to the arginase family
FIU11_18175	COG1166	arginine decarboxylase activity
FIU11_18185	COG4175	Glycine betaine
FIU11_18190	COG4176	ABC-type proline glycine betaine transport system permease component
FIU11_18195	COG2113	Glycine betaine
FIU11_18215	COG2239	Acts as a magnesium transporter
FIU11_18220	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FIU11_18235	COG0113	porphobilinogen synthase activity
FIU11_18245	COG0784	Response regulator, receiver
FIU11_18245	COG3437	response regulator, receiver
FIU11_18270	COG0527	aspartate kinase activity
FIU11_18275	COG0662	Cupin 2, conserved barrel domain protein
FIU11_18280	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FIU11_18285	COG0456	acetyltransferase
FIU11_18295	COG0861	Integral membrane protein TerC family
FIU11_18305	COG0534	Mate efflux family protein
FIU11_18310	COG2154	pterin-4-alpha-carbinolamine dehydratase
FIU11_18315	COG3186	Phenylalanine-4-hydroxylase
FIU11_18320	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FIU11_18330	COG0642	Histidine kinase
FIU11_18335	COG0745	RESPONSE REGULATOR receiver
FIU11_18385	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FIU11_18390	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
FIU11_18390	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FIU11_18400	COG2197	response regulator
FIU11_18405	COG2205	protein histidine kinase activity
FIU11_18405	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FIU11_18410	COG3300	MHYT domain
FIU11_18410	COG5001	Diguanylate cyclase
FIU11_18440	COG3036	rescue of stalled ribosome
FIU11_18445	COG1278	Cold shock
FIU11_18450	COG4681	YaeQ
FIU11_18455	COG3706	GGDEF domain
FIU11_18460	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FIU11_18460	COG1017	nitric oxide dioxygenase activity
FIU11_18465	COG3604	Transcriptional regulator
FIU11_18475	COG2195	Cleaves the N-terminal amino acid of tripeptides
FIU11_18480	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FIU11_18490	COG0366	Alpha amylase catalytic
FIU11_18505	COG0840	transmembrane signaling receptor activity
FIU11_18510	COG0714	Associated with various cellular activities
FIU11_18530	COG2304	oxidoreductase activity
FIU11_18545	COG5001	Diguanylate cyclase
FIU11_18555	COG0784	Response regulator, receiver
FIU11_18555	COG2205	protein histidine kinase activity
FIU11_18555	COG5002	protein histidine kinase activity
FIU11_18560	COG3706	GGDEF domain
FIU11_18560	COG0745	RESPONSE REGULATOR receiver
FIU11_18570	COG3724	N-succinylarginine dihydrolase activity
FIU11_18575	COG1012	belongs to the aldehyde dehydrogenase family
FIU11_18600	COG4948	Mandelate Racemase Muconate Lactonizing
FIU11_18625	COG0583	DNA-binding transcription factor activity
FIU11_18650	COG3171	Protein conserved in bacteria
FIU11_18655	COG0589	response to stress
FIU11_18665	COG3530	Putative quorum-sensing-regulated virulence factor
FIU11_18675	COG0579	oxidoreductase
FIU11_18690	COG2204	response regulator
FIU11_18720	COG5001	Diguanylate cyclase
FIU11_18720	COG3300	MHYT domain
FIU11_18725	COG2271	Major facilitator Superfamily
FIU11_18730	COG0584	glycerophosphoryl diester phosphodiesterase
FIU11_18735	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
FIU11_18740	COG0583	DNA-binding transcription factor activity
FIU11_18745	COG1609	Transcriptional regulator
FIU11_18750	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FIU11_18755	COG1879	ABC-type sugar transport system periplasmic component
FIU11_18760	COG1172	Belongs to the binding-protein-dependent transport system permease family
FIU11_18765	COG1129	ABC transporter
FIU11_18770	COG1869	D-ribose catabolic process
FIU11_18785	COG3501	Rhs element vgr protein
FIU11_18885	COG1846	Transcriptional regulator
FIU11_18900	COG0564	pseudouridine synthase activity
FIU11_18905	COG1309	transcriptional regulator
FIU11_18910	COG2130	NADP-dependent
FIU11_18925	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FIU11_18955	COG3842	ATPase activity
FIU11_18965	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FIU11_18970	COG0656	L-ascorbic acid biosynthetic process
FIU11_18975	COG1902	pentaerythritol trinitrate reductase activity
FIU11_18980	COG0583	DNA-binding transcription factor activity
FIU11_18985	COG2814	Major facilitator Superfamily
FIU11_19005	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FIU11_19010	COG1360	Flagellar Motor Protein
FIU11_19020	COG3188	usher protein
FIU11_19025	COG3121	Chaperone
FIU11_19070	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FIU11_19080	COG4702	Belongs to the UPF0303 family
FIU11_19085	COG0673	inositol 2-dehydrogenase activity
FIU11_19090	COG1349	DNA-binding transcription factor activity
FIU11_19100	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
FIU11_19120	COG3240	lipase activity
FIU11_19125	COG3477	response to acidic pH
FIU11_19130	COG0697	spore germination
FIU11_19135	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FIU11_19150	COG1917	Cupin 2, conserved barrel domain protein
FIU11_19150	COG2207	Transcriptional regulator
FIU11_19170	COG5001	Diguanylate cyclase
FIU11_19170	COG5002	protein histidine kinase activity
FIU11_19170	COG3447	MASE1 domain protein
FIU11_19180	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FIU11_19195	COG0109	protoheme IX farnesyltransferase activity
FIU11_19200	COG1612	heme a metabolic process
FIU11_19230	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FIU11_19240	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FIU11_19245	COG1902	pentaerythritol trinitrate reductase activity
FIU11_19255	COG1280	lysine exporter protein (LysE YggA)
FIU11_19275	COG0179	Fumarylacetoacetate (FAA) hydrolase
FIU11_19280	COG1846	Transcriptional regulator
FIU11_19285	COG1764	response to oxidative stress
FIU11_19305	COG2814	Major facilitator Superfamily
FIU11_19310	COG0583	DNA-binding transcription factor activity
FIU11_19315	COG5001	Diguanylate cyclase
FIU11_19320	COG0739	heme binding
FIU11_19335	COG0659	secondary active sulfate transmembrane transporter activity
FIU11_19350	COG2199	diguanylate cyclase activity
FIU11_19360	COG0581	inorganic phosphate transmembrane transporter activity
FIU11_19365	COG0573	inorganic phosphate transmembrane transporter activity
FIU11_19370	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FIU11_19380	COG0513	Belongs to the DEAD box helicase family
FIU11_19440	COG1376	ErfK ybiS ycfS ynhG family protein
FIU11_19440	COG1388	LysM domain
FIU11_19445	COG0415	Belongs to the DNA photolyase family
FIU11_19450	COG0789	Transcriptional regulator
FIU11_19455	COG3272	Protein of unknown function (DUF1722)
FIU11_19460	COG0813	purine-nucleoside phosphorylase activity
FIU11_19475	COG3706	GGDEF domain
FIU11_19485	COG1566	PFAM secretion protein HlyD family protein
FIU11_19520	COG0786	glutamate:sodium symporter activity
FIU11_19545	COG1162	GTPase activity
FIU11_19550	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
FIU11_19565	COG4580	involved in the transport of maltose and maltodextrins
FIU11_19575	COG1132	(ABC) transporter
FIU11_19595	COG3383	formate dehydrogenase (NAD+) activity
FIU11_19610	COG0840	transmembrane signaling receptor activity
FIU11_19620	COG1131	(ABC) transporter
FIU11_19625	COG2188	Transcriptional regulator
FIU11_19635	COG3033	Beta-eliminating lyase
FIU11_19640	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
FIU11_19645	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FIU11_19650	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FIU11_19655	COG0471	metal ion transport
FIU11_19680	COG3788	relative of glutathione S-transferase, MAPEG superfamily
FIU11_19700	COG3501	Rhs element vgr protein
FIU11_19710	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
FIU11_19715	COG1640	4-alpha-glucanotransferase
FIU11_19720	COG0058	SHG alpha-glucan phosphorylase activity
FIU11_19725	COG2909	trisaccharide binding
FIU11_19740	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FIU11_19745	COG1845	cytochrome c oxidase, subunit III
FIU11_19750	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FIU11_19755	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FIU11_19770	COG2084	Dehydrogenase
FIU11_19785	COG0217	transcriptional regulatory protein
FIU11_19815	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FIU11_19820	COG1444	tRNA N-acetyltransferase activity
FIU11_19830	COG0745	RESPONSE REGULATOR receiver
FIU11_19835	COG2198	Histidine kinase
FIU11_19835	COG0643	Histidine kinase
FIU11_19840	COG0835	chemotaxis
FIU11_19845	COG0835	chemotaxis
FIU11_19850	COG0840	transmembrane signaling receptor activity
FIU11_19855	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FIU11_19860	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
FIU11_19865	COG2201	protein-glutamate methylesterase activity
FIU11_19880	COG0745	RESPONSE REGULATOR receiver
FIU11_19890	COG0259	pyridoxamine-phosphate oxidase activity
FIU11_19900	COG1262	PFAM Formylglycine-generating sulfatase enzyme
FIU11_19935	COG0840	transmembrane signaling receptor activity
FIU11_19950	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FIU11_19960	COG0513	Belongs to the DEAD box helicase family
FIU11_19970	COG0583	DNA-binding transcription factor activity
FIU11_19975	COG2226	methyltransferase
FIU11_19990	COG0724	RNA recognition motif
FIU11_19995	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FIU11_20000	COG1522	sequence-specific DNA binding
FIU11_20005	COG2610	gluconate transmembrane transporter activity
FIU11_20010	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FIU11_20015	COG3622	Belongs to the hyi family
FIU11_20020	COG0235	Class ii aldolase
FIU11_20025	COG3395	kinase activity
FIU11_20030	COG2084	Dehydrogenase
FIU11_20035	COG1349	DNA-binding transcription factor activity
FIU11_20050	COG0583	DNA-binding transcription factor activity
FIU11_20055	COG2910	NAD(P)H-binding
FIU11_20070	COG1335	isochorismatase
FIU11_20075	COG2207	Transcriptional regulator
FIU11_20075	COG1609	Transcriptional regulator
FIU11_20090	COG2329	Antibiotic biosynthesis monooxygenase
FIU11_20095	COG3304	Inner membrane component domain
FIU11_20105	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FIU11_20110	COG2199	diguanylate cyclase activity
FIU11_20125	COG0583	DNA-binding transcription factor activity
FIU11_20130	COG4221	oxidoreductase activity
FIU11_20150	COG0583	DNA-binding transcription factor activity
FIU11_20155	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
FIU11_20160	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FIU11_20165	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FIU11_20170	COG2814	Major facilitator Superfamily
FIU11_20180	COG3118	belongs to the thioredoxin family
FIU11_20185	COG3118	belongs to the thioredoxin family
FIU11_20190	COG0492	ferredoxin-NADP+ reductase activity
FIU11_20195	COG1309	transcriptional regulator
FIU11_20210	COG2176	DNA-directed DNA polymerase activity
FIU11_20225	COG0443	Heat shock 70 kDa protein
FIU11_20230	COG0095	Lipoate-protein ligase
FIU11_20235	COG0243	molybdopterin cofactor binding
FIU11_20240	COG0437	4 iron, 4 sulfur cluster binding
FIU11_20245	COG3302	dmso reductase anchor subunit
FIU11_20255	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FIU11_20255	COG2221	Nitrite and sulphite reductase 4Fe-4S
FIU11_20265	COG0583	DNA-binding transcription factor activity
FIU11_20270	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
FIU11_20275	COG1473	amidohydrolase
FIU11_20290	COG2376	Dihydroxyacetone kinase
FIU11_20295	COG1461	Dihydroxyacetone kinase
FIU11_20300	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FIU11_20305	COG3284	Transcriptional regulator
FIU11_20315	COG3722	fumarate hydratase activity
FIU11_20320	COG0246	Mannitol dehydrogenase
FIU11_20325	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FIU11_20325	COG2213	PTS system mannitol-specific
FIU11_20330	COG0739	heme binding
FIU11_20345	COG0363	glucosamine-6-phosphate deaminase activity
FIU11_20370	COG0402	S-adenosylhomocysteine deaminase activity
FIU11_20375	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
FIU11_20380	COG2259	Doxx family
FIU11_20385	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
FIU11_20390	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FIU11_20400	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FIU11_20405	COG1301	dicarboxylic acid transport
FIU11_20415	COG1917	Cupin 2, conserved barrel domain protein
FIU11_20415	COG2169	Transcriptional regulator
FIU11_20445	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FIU11_20455	COG0583	DNA-binding transcription factor activity
FIU11_20460	COG1342	Belongs to the UPF0251 family
FIU11_20470	COG0583	DNA-binding transcription factor activity
FIU11_20475	COG3384	dioxygenase
FIU11_20490	COG4774	siderophore transport
FIU11_20495	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
FIU11_20500	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FIU11_20505	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FIU11_20510	COG1120	ATPase activity
FIU11_20520	COG0583	DNA-binding transcription factor activity
FIU11_20525	COG1028	Short-chain dehydrogenase reductase Sdr
FIU11_20535	COG0024	Methionine aminopeptidase
FIU11_20540	COG0519	Catalyzes the synthesis of GMP from XMP
FIU11_20550	COG1403	HNH endonuclease
FIU11_20555	COG2084	Dehydrogenase
FIU11_20580	COG3152	Membrane
FIU11_20600	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FIU11_20625	COG1304	FMN binding
FIU11_20630	COG1620	l-lactate permease
FIU11_20635	COG0583	DNA-binding transcription factor activity
FIU11_20640	COG4172	Belongs to the ABC transporter superfamily
FIU11_20650	COG1067	ATP-dependent peptidase activity
FIU11_20655	COG0840	transmembrane signaling receptor activity
FIU11_20660	COG2211	Major facilitator Superfamily
FIU11_20665	COG0668	transmembrane transport
FIU11_20670	COG0569	domain protein
FIU11_20675	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FIU11_20685	COG3123	guanosine phosphorylase activity
FIU11_20695	COG2814	Major facilitator Superfamily
FIU11_20705	COG3501	Rhs element vgr protein
FIU11_20805	COG2205	protein histidine kinase activity
FIU11_20810	COG0745	RESPONSE REGULATOR receiver
FIU11_20815	COG1741	Belongs to the pirin family
FIU11_20870	COG3706	GGDEF domain
FIU11_20880	COG1846	Transcriptional regulator
FIU11_20885	COG2315	Protein conserved in bacteria
FIU11_20890	COG0784	Response regulator, receiver
FIU11_20890	COG0835	chemotaxis
FIU11_20895	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FIU11_20920	COG1215	transferase activity, transferring glycosyl groups
FIU11_20925	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FIU11_20930	COG0367	asparagine synthase
FIU11_20940	COG0251	oxidation-reduction process
FIU11_20950	COG0583	DNA-binding transcription factor activity
FIU11_20970	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FIU11_20990	COG1522	sequence-specific DNA binding
FIU11_20995	COG2197	response regulator
FIU11_21000	COG0393	Putative heavy-metal-binding
FIU11_21005	COG0823	Involved in the tonB-independent uptake of proteins
FIU11_21010	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FIU11_21015	COG0534	Mate efflux family protein
FIU11_21025	COG1653	transport
FIU11_21030	COG3842	ATPase activity
FIU11_21035	COG0395	ABC-type sugar transport system, permease component
FIU11_21040	COG1175	transmembrane transport
FIU11_21055	COG0840	transmembrane signaling receptor activity
FIU11_21065	COG0800	Aldolase
FIU11_21070	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FIU11_21080	COG0235	Class ii aldolase
FIU11_21085	COG3254	rhamnose metabolic process
FIU11_21090	COG4806	L-rhamnose isomerase
FIU11_21095	COG1070	Carbohydrate kinase
FIU11_21100	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
FIU11_21130	COG1917	Cupin 2, conserved barrel domain protein
FIU11_21140	COG1028	Short-chain dehydrogenase reductase Sdr
FIU11_21150	COG0517	IMP dehydrogenase activity
FIU11_21170	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FIU11_21180	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FIU11_21220	COG3842	ATPase activity
FIU11_21260	COG1349	DNA-binding transcription factor activity
FIU11_21280	COG2354	Protein conserved in bacteria
FIU11_21285	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FIU11_21290	COG0418	dihydroorotase activity
FIU11_21295	COG0633	Ferredoxin
FIU11_21295	COG3217	Mosc domain protein beta barrel domain protein
FIU11_21325	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
FIU11_21330	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FIU11_21340	COG0848	biopolymer transport protein
FIU11_21345	COG0811	peptide transport
FIU11_21350	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
FIU11_21360	COG3721	Heme iron utilization protein
FIU11_21365	COG0748	coenzyme F420 binding
FIU11_21375	COG0531	amino acid
FIU11_21380	COG1522	sequence-specific DNA binding
FIU11_21405	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FIU11_21410	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FIU11_21435	COG5002	protein histidine kinase activity
FIU11_21435	COG2205	protein histidine kinase activity
FIU11_21435	COG0784	Response regulator, receiver
FIU11_21460	COG1765	OsmC-like protein
FIU11_21495	COG1765	OsmC-like protein
FIU11_21505	COG0110	maltose O-acetyltransferase activity
FIU11_21535	COG3121	Chaperone
FIU11_21540	COG0579	oxidoreductase
FIU11_21555	COG0583	DNA-binding transcription factor activity
FIU11_21560	COG0798	PFAM Bile acid sodium symporter
FIU11_21565	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FIU11_21575	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
FIU11_21630	COG0513	Belongs to the DEAD box helicase family
FIU11_21645	COG0840	transmembrane signaling receptor activity
FIU11_21665	COG2985	domain, Protein
FIU11_21675	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FIU11_21720	COG3122	Protein conserved in bacteria
FIU11_21725	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
FIU11_21735	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FIU11_21740	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FIU11_21740	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FIU11_21745	COG0509	glycine decarboxylation via glycine cleavage system
FIU11_21750	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FIU11_21760	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FIU11_21770	COG3706	GGDEF domain
FIU11_21770	COG0745	RESPONSE REGULATOR receiver
FIU11_21775	COG3300	MHYT domain
FIU11_21775	COG5001	Diguanylate cyclase
FIU11_21780	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FIU11_21820	COG0484	heat shock protein binding
FIU11_21830	COG1716	ATPase activity
FIU11_21830	COG5001	Diguanylate cyclase
FIU11_21835	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FIU11_21845	COG4181	ATPase activity
FIU11_21850	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
FIU11_21860	COG1984	allophanate hydrolase subunit 2
FIU11_21870	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
FIU11_21875	COG5001	Diguanylate cyclase
FIU11_21875	COG3447	MASE1 domain protein
FIU11_21875	COG5002	protein histidine kinase activity
FIU11_21885	COG0840	transmembrane signaling receptor activity
FIU11_21890	COG0814	amino acid
FIU11_21895	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
FIU11_21900	COG0513	Belongs to the DEAD box helicase family
FIU11_21905	COG1309	transcriptional regulator
FIU11_21915	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
FIU11_21930	COG2425	protein containing a von Willebrand factor type A (vWA) domain
FIU11_21960	COG0840	transmembrane signaling receptor activity
FIU11_21975	COG0583	DNA-binding transcription factor activity
FIU11_21980	COG0697	spore germination
FIU11_22005	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
FIU11_22020	COG0406	alpha-ribazole phosphatase activity
FIU11_22025	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FIU11_22030	COG1454	alcohol dehydrogenase
FIU11_22035	COG1609	Transcriptional regulator
FIU11_22035	COG2207	Transcriptional regulator
FIU11_22050	COG3634	alkyl hydroperoxide reductase activity
FIU11_22055	COG0450	alkyl hydroperoxide reductase
FIU11_22070	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FIU11_22075	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FIU11_22080	COG1960	acyl-CoA dehydrogenase activity
FIU11_22090	COG0183	Belongs to the thiolase family
FIU11_22100	COG1960	acyl-CoA dehydrogenase activity
FIU11_22105	COG1024	Enoyl-CoA hydratase
FIU11_22110	COG1024	Enoyl-CoA hydratase
FIU11_22120	COG1028	Short-chain dehydrogenase reductase Sdr
FIU11_22130	COG1028	Short-chain dehydrogenase reductase Sdr
FIU11_22135	COG2211	Major facilitator Superfamily
FIU11_22140	COG1397	ADP-ribosylglycohydrolase
FIU11_22145	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FIU11_22155	COG2188	Transcriptional regulator
FIU11_22165	COG0653	protein targeting
FIU11_22180	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FIU11_22200	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FIU11_22200	COG0512	Glutamine amidotransferase of anthranilate synthase
FIU11_22205	COG1454	alcohol dehydrogenase
FIU11_22210	COG1464	Belongs to the NlpA lipoprotein family
FIU11_22245	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FIU11_22250	COG0625	glutathione transferase activity
FIU11_22305	COG2721	sulfolactate sulfo-lyase activity
FIU11_22320	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FIU11_22330	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FIU11_22335	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FIU11_22340	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FIU11_22360	COG1473	amidohydrolase
FIU11_22375	COG1280	lysine exporter protein (LysE YggA)
FIU11_22380	COG0400	carboxylic ester hydrolase activity
FIU11_22385	COG0435	Glutathione S-transferase
FIU11_22390	COG0583	DNA-binding transcription factor activity
FIU11_22395	COG4145	pantothenate transmembrane transporter activity
FIU11_22405	COG2423	ornithine cyclodeaminase activity
FIU11_22420	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FIU11_22445	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
FIU11_22455	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FIU11_22475	COG2207	Transcriptional regulator
FIU11_22495	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FIU11_22505	COG0488	(ABC) transporter
FIU11_22585	COG0454	-acetyltransferase
FIU11_22595	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FIU11_22750	COG0515	serine threonine protein kinase
FIU11_22885	COG1028	Short-chain dehydrogenase reductase Sdr
FIU11_22905	COG0010	Belongs to the arginase family
FIU11_22920	COG1252	NADH dehydrogenase
FIU11_22930	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FIU11_22935	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FIU11_22940	COG4232	protein-disulfide reductase activity
FIU11_22950	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
FIU11_22955	COG0110	maltose O-acetyltransferase activity
FIU11_22970	COG3008	intermembrane lipid transfer
FIU11_22970	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FIU11_22975	COG2995	paraquat-inducible protein a
FIU11_22980	COG0318	PFAM AMP-dependent synthetase and ligase
FIU11_22990	COG1012	belongs to the aldehyde dehydrogenase family
FIU11_22995	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FIU11_23005	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FIU11_23015	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FIU11_23030	COG0583	DNA-binding transcription factor activity
FIU11_23040	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FIU11_23050	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
FIU11_23055	COG0513	Belongs to the DEAD box helicase family
FIU11_23060	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FIU11_23085	COG4633	Protein conserved in bacteria
FIU11_23090	COG4628	conserved protein (DUF2132)
FIU11_23130	COG0789	Transcriptional regulator
FIU11_23135	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FIU11_23190	COG0454	-acetyltransferase
FIU11_23200	COG1028	Short-chain dehydrogenase reductase Sdr
FIU11_23235	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FIU11_23245	COG0494	nUDIX hydrolase
FIU11_23250	COG1280	lysine exporter protein (LysE YggA)
FIU11_23260	COG0456	acetyltransferase
FIU11_23270	COG1335	isochorismatase
FIU11_23300	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FIU11_23305	COG1309	transcriptional regulator
FIU11_23315	COG0583	DNA-binding transcription factor activity
FIU11_23325	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FIU11_23340	COG2897	thiosulfate sulfurtransferase activity
FIU11_23345	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FIU11_23355	COG0302	gtp cyclohydrolase
FIU11_23360	COG0531	amino acid
FIU11_23370	COG4303	Ethanolamine ammonia lyase large subunit
FIU11_23380	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FIU11_23380	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FIU11_23385	COG2759	Belongs to the formate--tetrahydrofolate ligase family
FIU11_23390	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
FIU11_23405	COG1011	Hydrolase
FIU11_23410	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FIU11_23420	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3