vfu_A00001 SM00838 Elongation factor G C-terminus vfu_A00001 SM00889 Elongation factor G, domain IV vfu_A00009 SM00320 WD40 repeats vfu_A00012 SM00244 prohibitin homologues vfu_A00013 SM00244 prohibitin homologues vfu_A00017 SM00853 MutL C terminal dimerisation domain vfu_A00017 SM01340 vfu_A00017 vfu_A00018 SM00257 Lysin motif vfu_A00018 SM00646 vfu_A00018 vfu_A00022 SM00479 vfu_A00022 vfu_A00028 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_A00028 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_A00037 SM00663 RNA polymerase I subunit A N-terminus vfu_A00042 SM00649 Ribosomal protein L11/L12 vfu_A00043 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. vfu_A00043 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. vfu_A00050 SM00155 Phospholipase D. Active site motifs. vfu_A00058 SM00357 Cold shock protein domain vfu_A00058 SM00382 ATPases associated with a variety of cellular activities vfu_A00058 SM00959 Rho termination factor, N-terminal domain vfu_A00060 SM00487 DEAD-like helicases superfamily vfu_A00060 SM00490 helicase superfamily c-terminal domain vfu_A00062 SM00387 Histidine kinase-like ATPases vfu_A00062 SM00388 His Kinase A (phosphoacceptor) domain vfu_A00062 SM00448 cheY-homologous receiver domain vfu_A00064 SM00100 Cyclic nucleotide-monophosphate binding domain vfu_A00065 SM00479 vfu_A00065 vfu_A00069 SM00878 Biotin carboxylase C-terminal domain vfu_A00073 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_A00073 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_A00073 SM01049 vfu_A00073 vfu_A00076 SM00342 helix_turn_helix, arabinose operon control protein vfu_A00080 SM00422 helix_turn_helix, mercury resistance vfu_A00082 SM00798 AICARFT/IMPCHase bienzyme vfu_A00082 SM00851 MGS-like domain vfu_A00083 SM01209 vfu_A00083 vfu_A00083 SM01210 vfu_A00083 vfu_A00085 SM00411 bacterial (prokaryotic) histone like domain vfu_A00090 SM00986 Uracil DNA glycosylase superfamily vfu_A00090 SM00987 UreE urease accessory protein, C-terminal domain vfu_A00097 SM00849 Metallo-beta-lactamase superfamily vfu_A00097 SM01027 Beta-Casp domain vfu_A00116 SM00984 UDP binding domain vfu_A00127 SM00226 Low molecular weight phosphatase family vfu_A00134 SM00984 UDP binding domain vfu_A00152 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain vfu_A00152 SM01232 vfu_A00152 vfu_A00157 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_A00157 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_A00157 SM01049 vfu_A00157 vfu_A00185 SM00387 Histidine kinase-like ATPases vfu_A00185 SM00388 His Kinase A (phosphoacceptor) domain vfu_A00186 SM00862 Transcriptional regulatory protein, C terminal vfu_A00190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_A00190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_A00190 SM01358 vfu_A00190 vfu_A00214 SM00382 ATPases associated with a variety of cellular activities vfu_A00216 SM00382 ATPases associated with a variety of cellular activities vfu_A00219 SM00341 Helicase and RNase D C-terminal vfu_A00219 SM00487 DEAD-like helicases superfamily vfu_A00219 SM00490 helicase superfamily c-terminal domain vfu_A00219 SM00956 vfu_A00219 vfu_A00221 SM00342 helix_turn_helix, arabinose operon control protein vfu_A00234 SM00347 helix_turn_helix multiple antibiotic resistance protein vfu_A00238 SM00220 Serine/Threonine protein kinases, catalytic domain vfu_A00247 SM00382 ATPases associated with a variety of cellular activities vfu_A00266 SM01001 AIR carboxylase vfu_A00271 SM00257 Lysin motif vfu_A00285 SM00563 Phosphate acyltransferases vfu_A00286 SM00382 ATPases associated with a variety of cellular activities vfu_A00293 SM00829 Enoylreductase vfu_A00297 SM00267 diguanylate cyclase vfu_A00298 SM00267 diguanylate cyclase vfu_A00304 SM00836 DALR anticodon binding domain vfu_A00310 SM00387 Histidine kinase-like ATPases vfu_A00310 SM00433 TopoisomeraseII vfu_A00312 SM00480 DNA polymerase III beta subunit vfu_A00313 SM00382 ATPases associated with a variety of cellular activities vfu_A00313 SM00760 Bacterial dnaA protein helix-turn-helix domain vfu_A00314 SM00062 Bacterial periplasmic substrate-binding proteins vfu_A00314 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. vfu_A00316 SM00382 ATPases associated with a variety of cellular activities vfu_A00325 SM00877 vfu_A00325 vfu_A00331 SM00877 vfu_A00331 vfu_A00332 SM00877 vfu_A00332 vfu_A00333 SM00877 vfu_A00333 vfu_A00336 SM00862 Transcriptional regulatory protein, C terminal vfu_A00339 SM01228 vfu_A00339 vfu_A00342 SM00470 ParB-like nuclease domain vfu_A00350 SM00382 ATPases associated with a variety of cellular activities vfu_A00354 SM00062 Bacterial periplasmic substrate-binding proteins vfu_A00373 SM00876 Biotin and Thiamin Synthesis associated domain vfu_A00375 SM00382 ATPases associated with a variety of cellular activities vfu_A00386 SM00344 helix_turn_helix ASNC type vfu_A00387 SM00052 Putative diguanylate phosphodiesterase vfu_A00387 SM00091 PAS domain vfu_A00387 SM00267 diguanylate cyclase vfu_A00397 SM00382 ATPases associated with a variety of cellular activities vfu_A00400 SM00382 ATPases associated with a variety of cellular activities vfu_A00403 SM01007 Class II Aldolase and Adducin N-terminal domain vfu_A00406 SM00342 helix_turn_helix, arabinose operon control protein vfu_A00421 SM01004 Delta-aminolevulinic acid dehydratase vfu_A00423 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs vfu_A00423 SM00474 3'-5' exonuclease vfu_A00423 SM00475 5'-3' exonuclease vfu_A00423 SM00482 DNA polymerase A domain vfu_A00429 SM00729 Elongator protein 3, MiaB family, Radical SAM vfu_A00430 SM00028 Tetratricopeptide repeats vfu_A00436 SM01219 vfu_A00436 vfu_A00443 SM00897 FIST N domain vfu_A00443 SM01204 vfu_A00443 vfu_A00444 SM01144 vfu_A00444 vfu_A00450 SM00052 Putative diguanylate phosphodiesterase vfu_A00451 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor vfu_A00452 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain vfu_A00467 SM00382 ATPases associated with a variety of cellular activities vfu_A00467 SM00962 SRP54-type protein, GTPase domain vfu_A00467 SM00963 SRP54-type protein, helical bundle domain vfu_A00468 SM00382 ATPases associated with a variety of cellular activities vfu_A00471 SM00450 Rhodanese Homology Domain vfu_A00476 SM00563 Phosphate acyltransferases vfu_A00493 SM00052 Putative diguanylate phosphodiesterase vfu_A00493 SM00267 diguanylate cyclase vfu_A00494 SM00382 ATPases associated with a variety of cellular activities vfu_A00494 SM00448 cheY-homologous receiver domain vfu_A00495 SM00091 PAS domain vfu_A00495 SM00387 Histidine kinase-like ATPases vfu_A00495 SM00388 His Kinase A (phosphoacceptor) domain vfu_A00498 SM01230 vfu_A00498 vfu_A00511 SM00382 ATPases associated with a variety of cellular activities vfu_A00528 SM00316 Ribosomal protein S1-like RNA-binding domain vfu_A00528 SM00732 Likely ribonuclease with RNase H fold. vfu_A00532 SM00354 helix_turn _helix lactose operon repressor vfu_A00538 SM00448 cheY-homologous receiver domain vfu_A00538 SM00862 Transcriptional regulatory protein, C terminal vfu_A00539 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_A00539 SM00387 Histidine kinase-like ATPases vfu_A00539 SM00388 His Kinase A (phosphoacceptor) domain vfu_A00542 SM00487 DEAD-like helicases superfamily vfu_A00542 SM00490 helicase superfamily c-terminal domain vfu_A00544 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. vfu_A00544 SM00954 Region found in RelA / SpoT proteins vfu_A00545 SM01409 vfu_A00545 vfu_A00546 SM00072 Guanylate kinase homologues. vfu_A00551 SM01091 Transporter associated domain vfu_A00552 SM00421 helix_turn_helix, Lux Regulon vfu_A00552 SM00448 cheY-homologous receiver domain vfu_A00568 SM00267 diguanylate cyclase vfu_A00572 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_A00572 SM00387 Histidine kinase-like ATPases vfu_A00572 SM00388 His Kinase A (phosphoacceptor) domain vfu_A00573 SM00448 cheY-homologous receiver domain vfu_A00573 SM00862 Transcriptional regulatory protein, C terminal vfu_A00584 SM00919 Malic enzyme, NAD binding domain vfu_A00584 SM01274 vfu_A00584 vfu_A00586 SM00487 DEAD-like helicases superfamily vfu_A00586 SM00490 helicase superfamily c-terminal domain vfu_A00587 SM00354 helix_turn _helix lactose operon repressor vfu_A00591 SM00382 ATPases associated with a variety of cellular activities vfu_A00591 SM01086 C-terminal, D2-small domain, of ClpB protein vfu_A00601 SM00883 Chaperonin 10 Kd subunit vfu_A00603 SM00382 ATPases associated with a variety of cellular activities vfu_A00607 SM00841 Elongation factor P, C-terminal vfu_A00607 SM01185 vfu_A00607 vfu_A00613 SM00450 Rhodanese Homology Domain vfu_A00616 SM00971 Serine acetyltransferase, N-terminal vfu_A00620 SM00859 Semialdehyde dehydrogenase, NAD binding domain vfu_A00633 SM00965 Secretin and TonB N terminus short domain vfu_A00647 SM01150 vfu_A00647 vfu_A00648 SM00100 Cyclic nucleotide-monophosphate binding domain vfu_A00648 SM00419 helix_turn_helix, cAMP Regulatory protein vfu_A00653 SM00382 ATPases associated with a variety of cellular activities vfu_A00660 SM00788 Adenylosuccinate synthetase vfu_A00661 SM00671 Sel1-like repeats. vfu_A00663 SM00357 Cold shock protein domain vfu_A00663 SM00955 vfu_A00663 vfu_A00664 SM00316 Ribosomal protein S1-like RNA-binding domain vfu_A00664 SM00955 vfu_A00664 vfu_A00665 SM00967 RNA 2'-O ribose methyltransferase substrate binding vfu_A00666 SM01403 vfu_A00666 vfu_A00670 SM01382 vfu_A00670 vfu_A00670 SM01383 vfu_A00670 vfu_A00673 SM00322 K homology RNA-binding domain vfu_A00677 SM01374 vfu_A00677 vfu_A00678 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. vfu_A00690 SM00363 S4 RNA-binding domain vfu_A00690 SM01390 vfu_A00690 vfu_A00691 SM00662 RNA polymerases D vfu_A00697 SM00487 DEAD-like helicases superfamily vfu_A00697 SM00490 helicase superfamily c-terminal domain vfu_A00710 SM00382 ATPases associated with a variety of cellular activities vfu_A00725 SM00382 ATPases associated with a variety of cellular activities vfu_A00728 SM00924 MgtE intracellular N domain vfu_A00734 SM00382 ATPases associated with a variety of cellular activities vfu_A00738 SM00116 Domain in cystathionine beta-synthase and other proteins. vfu_A00740 SM00382 ATPases associated with a variety of cellular activities vfu_A00747 SM00563 Phosphate acyltransferases vfu_A00752 SM00670 Large family of predicted nucleotide-binding domains vfu_A00753 SM00487 DEAD-like helicases superfamily vfu_A00753 SM00490 helicase superfamily c-terminal domain vfu_A00765 SM00267 diguanylate cyclase vfu_A00779 SM00528 Domain in histone-like proteins of HNS family vfu_A00790 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_A00791 SM00052 Putative diguanylate phosphodiesterase vfu_A00791 SM00267 diguanylate cyclase vfu_A00800 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. vfu_A00807 SM01329 vfu_A00807 vfu_A00808 SM00917 LeuA allosteric (dimerisation) domain vfu_A00810 SM00014 Acid phosphatase homologues vfu_A00834 SM00838 Elongation factor G C-terminus vfu_A00836 SM00358 Double-stranded RNA binding motif vfu_A00836 SM00535 Ribonuclease III family vfu_A00841 SM00073 Histidine Phosphotransfer domain vfu_A00841 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_A00841 SM00387 Histidine kinase-like ATPases vfu_A00841 SM00388 His Kinase A (phosphoacceptor) domain vfu_A00841 SM00448 cheY-homologous receiver domain vfu_A00843 SM00954 Region found in RelA / SpoT proteins vfu_A00846 SM01192 vfu_A00846 vfu_A00846 SM01193 vfu_A00846 vfu_A00848 SM00382 ATPases associated with a variety of cellular activities vfu_A00850 SM00287 Bacterial SH3 domain homologues vfu_A00853 SM00880 vfu_A00853 vfu_A00853 SM01118 vfu_A00853 vfu_A00855 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_A00855 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_A00864 SM00387 Histidine kinase-like ATPases vfu_A00864 SM00433 TopoisomeraseII vfu_A00865 SM00434 DNA Topoisomerase IV vfu_A00874 SM00644 vfu_A00874 vfu_A00879 SM00345 helix_turn_helix gluconate operon transcriptional repressor vfu_A00879 SM00895 vfu_A00879 vfu_A00886 SM00947 Carbonic anhydrase vfu_A00887 SM00382 ATPases associated with a variety of cellular activities vfu_A00896 SM00487 DEAD-like helicases superfamily vfu_A00896 SM00490 helicase superfamily c-terminal domain vfu_A00896 SM00847 Helicase associated domain (HA2) Add an annotation vfu_A00901 SM00938 Nitrogen regulatory protein P-II vfu_A00905 SM00382 ATPases associated with a variety of cellular activities vfu_A00907 SM01068 Putative carbohydrate binding domain vfu_A00911 SM00382 ATPases associated with a variety of cellular activities vfu_A00912 SM00382 ATPases associated with a variety of cellular activities vfu_A00916 SM00091 PAS domain vfu_A00916 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_A00916 SM00387 Histidine kinase-like ATPases vfu_A00916 SM00388 His Kinase A (phosphoacceptor) domain vfu_A00916 SM00448 cheY-homologous receiver domain vfu_A00931 SM01103 vfu_A00931 vfu_A00933 SM00382 ATPases associated with a variety of cellular activities vfu_A00939 SM00316 Ribosomal protein S1-like RNA-binding domain vfu_A00943 SM01387 vfu_A00943 vfu_A00944 SM00316 Ribosomal protein S1-like RNA-binding domain vfu_A00944 SM00322 K homology RNA-binding domain vfu_A00945 SM00028 Tetratricopeptide repeats vfu_A00946 SM00347 helix_turn_helix multiple antibiotic resistance protein vfu_A00950 SM00052 Putative diguanylate phosphodiesterase vfu_A00950 SM00267 diguanylate cyclase vfu_A00955 SM00052 Putative diguanylate phosphodiesterase vfu_A00955 SM00267 diguanylate cyclase vfu_A00957 SM00487 DEAD-like helicases superfamily vfu_A00957 SM00490 helicase superfamily c-terminal domain vfu_A00961 SM00937 vfu_A00961 vfu_A00963 SM00382 ATPases associated with a variety of cellular activities vfu_A00968 SM00927 DNA mismatch repair enzyme MutH vfu_A00970 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. vfu_A00977 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor vfu_A00980 SM00904 Riboflavin kinase vfu_A00991 SM00448 cheY-homologous receiver domain vfu_A00991 SM00850 LytTr DNA-binding domain vfu_A00994 SM00830 Chorismate mutase type II vfu_A00997 SM00382 ATPases associated with a variety of cellular activities vfu_A01001 SM00052 Putative diguanylate phosphodiesterase vfu_A01001 SM00267 diguanylate cyclase vfu_A01003 SM00830 Chorismate mutase type II vfu_A01005 SM00062 Bacterial periplasmic substrate-binding proteins vfu_A01007 SM00363 S4 RNA-binding domain vfu_A01009 SM00382 ATPases associated with a variety of cellular activities vfu_A01009 SM01086 C-terminal, D2-small domain, of ClpB protein vfu_A01013 SM00382 ATPases associated with a variety of cellular activities vfu_A01030 SM00900 vfu_A01030 vfu_A01039 SM00267 diguanylate cyclase vfu_A01046 SM00345 helix_turn_helix gluconate operon transcriptional repressor vfu_A01056 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase vfu_A01067 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. vfu_A01076 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. vfu_A01078 SM00935 Outer membrane protein (OmpH-like) vfu_A01084 SM00481 DNA polymerase alpha chain like domain vfu_A01086 SM00977 TilS substrate C-terminal domain vfu_A01088 SM00938 Nitrogen regulatory protein P-II vfu_A01090 SM00257 Lysin motif vfu_A01091 SM00849 Metallo-beta-lactamase superfamily vfu_A01094 SM00479 vfu_A01094 vfu_A01102 SM00363 S4 RNA-binding domain vfu_A01103 SM00463 Small MutS-related domain vfu_A01106 SM01081 Putative carbohydrate binding domain vfu_A01117 SM00858 vfu_A01117 vfu_A01118 SM00260 Two component signalling adaptor domain vfu_A01118 SM00448 cheY-homologous receiver domain vfu_A01119 SM00138 Methyltransferase, chemotaxis proteins vfu_A01129 SM00047 Lysozyme subfamily 2 vfu_A01138 SM01400 vfu_A01138 vfu_A01142 SM00937 vfu_A01142 vfu_A01158 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_A01158 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_A01161 SM01130 vfu_A01161 vfu_A01171 SM00354 helix_turn _helix lactose operon repressor vfu_A01172 SM00479 vfu_A01172 vfu_A01173 SM00116 Domain in cystathionine beta-synthase and other proteins. vfu_A01186 SM00382 ATPases associated with a variety of cellular activities vfu_A01187 SM00091 PAS domain vfu_A01187 SM00387 Histidine kinase-like ATPases vfu_A01187 SM00388 His Kinase A (phosphoacceptor) domain vfu_A01188 SM00382 ATPases associated with a variety of cellular activities vfu_A01188 SM00448 cheY-homologous receiver domain vfu_A01193 SM00382 ATPases associated with a variety of cellular activities vfu_A01204 SM00463 Small MutS-related domain vfu_A01213 SM00825 Beta-ketoacyl synthase vfu_A01216 SM00859 Semialdehyde dehydrogenase, NAD binding domain vfu_A01234 SM00861 Transketolase, pyrimidine binding domain vfu_A01237 SM00881 CoA binding domain vfu_A01239 SM00382 ATPases associated with a variety of cellular activities vfu_A01241 SM00342 helix_turn_helix, arabinose operon control protein vfu_A01242 SM00899 vfu_A01242 vfu_A01246 SM00836 DALR anticodon binding domain vfu_A01246 SM01016 Arginyl tRNA synthetase N terminal dom vfu_A01251 SM00382 ATPases associated with a variety of cellular activities vfu_A01251 SM00962 SRP54-type protein, GTPase domain vfu_A01254 SM00448 cheY-homologous receiver domain vfu_A01256 SM00073 Histidine Phosphotransfer domain vfu_A01256 SM00260 Two component signalling adaptor domain vfu_A01256 SM00387 Histidine kinase-like ATPases vfu_A01256 SM01231 vfu_A01256 vfu_A01257 SM00448 cheY-homologous receiver domain vfu_A01259 SM00260 Two component signalling adaptor domain vfu_A01260 SM00260 Two component signalling adaptor domain vfu_A01262 SM00382 ATPases associated with a variety of cellular activities vfu_A01276 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain vfu_A01276 SM00437 Bacterial DNA topoisomerase I DNA-binding domain vfu_A01276 SM00493 vfu_A01276 vfu_A01291 SM00073 Histidine Phosphotransfer domain vfu_A01293 SM00859 Semialdehyde dehydrogenase, NAD binding domain vfu_A01300 SM00316 Ribosomal protein S1-like RNA-binding domain vfu_A01301 SM00363 S4 RNA-binding domain vfu_A01307 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. vfu_A01308 SM00822 vfu_A01308 vfu_A01310 SM00825 Beta-ketoacyl synthase vfu_A01326 SM00260 Two component signalling adaptor domain vfu_A01326 SM00448 cheY-homologous receiver domain vfu_A01327 SM00481 DNA polymerase alpha chain like domain vfu_A01334 SM01144 vfu_A01334 vfu_A01335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. vfu_A01336 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. vfu_A01343 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain vfu_A01346 SM00563 Phosphate acyltransferases vfu_A01348 SM00978 vfu_A01348 vfu_A01350 SM00342 helix_turn_helix, arabinose operon control protein vfu_A01350 SM00871 Bacterial transcription activator, effector binding domain vfu_A01355 SM00858 vfu_A01355 vfu_A01376 SM00346 helix_turn_helix isocitrate lyase regulation vfu_A01403 SM00382 ATPases associated with a variety of cellular activities vfu_A01403 SM00448 cheY-homologous receiver domain vfu_A01408 SM00382 ATPases associated with a variety of cellular activities vfu_A01411 SM00344 helix_turn_helix ASNC type vfu_A01418 SM00062 Bacterial periplasmic substrate-binding proteins vfu_A01418 SM00267 diguanylate cyclase vfu_A01421 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_A01421 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_A01424 SM00342 helix_turn_helix, arabinose operon control protein vfu_A01429 SM00342 helix_turn_helix, arabinose operon control protein vfu_A01441 SM00487 DEAD-like helicases superfamily vfu_A01441 SM00490 helicase superfamily c-terminal domain vfu_A01445 SM00421 helix_turn_helix, Lux Regulon vfu_A01445 SM00448 cheY-homologous receiver domain vfu_A01446 SM00387 Histidine kinase-like ATPases vfu_A01446 SM00388 His Kinase A (phosphoacceptor) domain vfu_A01449 SM00926 Molybdopterin oxidoreductase Fe4S4 domain vfu_A01452 SM00267 diguanylate cyclase vfu_A01452 SM01079 vfu_A01452 vfu_A01453 SM00345 helix_turn_helix gluconate operon transcriptional repressor vfu_A01470 SM00822 vfu_A01470 vfu_A01482 SM00823 Phosphopantetheine attachment site vfu_A01483 SM00382 ATPases associated with a variety of cellular activities vfu_A01485 SM00354 helix_turn _helix lactose operon repressor vfu_A01492 SM00382 ATPases associated with a variety of cellular activities vfu_A01501 SM00342 helix_turn_helix, arabinose operon control protein vfu_A01501 SM00871 Bacterial transcription activator, effector binding domain vfu_A01503 SM00448 cheY-homologous receiver domain vfu_A01503 SM00862 Transcriptional regulatory protein, C terminal vfu_A01504 SM00388 His Kinase A (phosphoacceptor) domain vfu_A01506 SM00354 helix_turn _helix lactose operon repressor vfu_A01507 SM00640 Glycosyl hydrolases family 32 vfu_A01512 SM00825 Beta-ketoacyl synthase vfu_A01513 SM00822 vfu_A01513 vfu_A01515 SM00825 Beta-ketoacyl synthase vfu_A01527 SM00563 Phosphate acyltransferases vfu_A01536 SM00382 ATPases associated with a variety of cellular activities vfu_A01537 SM00382 ATPases associated with a variety of cellular activities vfu_A01546 SM00382 ATPases associated with a variety of cellular activities vfu_A01547 SM00267 diguanylate cyclase vfu_A01552 SM00382 ATPases associated with a variety of cellular activities vfu_A01556 SM00926 Molybdopterin oxidoreductase Fe4S4 domain vfu_A01559 SM01012 vfu_A01559 vfu_A01563 SM00382 ATPases associated with a variety of cellular activities vfu_A01567 SM00729 Elongator protein 3, MiaB family, Radical SAM vfu_A01567 SM00876 Biotin and Thiamin Synthesis associated domain vfu_A01587 SM00528 Domain in histone-like proteins of HNS family vfu_A01589 SM00382 ATPases associated with a variety of cellular activities vfu_A01604 SM00357 Cold shock protein domain vfu_A01606 SM00382 ATPases associated with a variety of cellular activities vfu_A01606 SM01086 C-terminal, D2-small domain, of ClpB protein vfu_A01607 SM00316 Ribosomal protein S1-like RNA-binding domain vfu_A01613 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain vfu_A01613 SM00437 Bacterial DNA topoisomerase I DNA-binding domain vfu_A01613 SM00493 vfu_A01613 vfu_A01614 SM00267 diguanylate cyclase vfu_A01622 SM00354 helix_turn _helix lactose operon repressor vfu_A01624 SM00448 cheY-homologous receiver domain vfu_A01624 SM00862 Transcriptional regulatory protein, C terminal vfu_A01649 SM00062 Bacterial periplasmic substrate-binding proteins vfu_A01652 SM01131 vfu_A01652 vfu_A01655 SM00382 ATPases associated with a variety of cellular activities vfu_A01660 SM00382 ATPases associated with a variety of cellular activities vfu_A01669 SM00155 Phospholipase D. Active site motifs. vfu_A01674 SM01130 vfu_A01674 vfu_A01676 SM00382 ATPases associated with a variety of cellular activities vfu_A01683 SM00382 ATPases associated with a variety of cellular activities vfu_A01690 SM00357 Cold shock protein domain vfu_A01701 SM00998 Adenylosuccinate lyase C-terminus vfu_A01702 SM00919 Malic enzyme, NAD binding domain vfu_A01702 SM01274 vfu_A01702 vfu_A01705 SM00422 helix_turn_helix, mercury resistance vfu_A01708 SM00387 Histidine kinase-like ATPases vfu_A01709 SM00448 cheY-homologous receiver domain vfu_A01709 SM00862 Transcriptional regulatory protein, C terminal vfu_A01711 SM00487 DEAD-like helicases superfamily vfu_A01711 SM00490 helicase superfamily c-terminal domain vfu_A01712 SM00363 S4 RNA-binding domain vfu_A01717 SM00382 ATPases associated with a variety of cellular activities vfu_A01723 SM00112 Cadherin repeats. vfu_A01727 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_A01727 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_A01727 SM01049 vfu_A01727 vfu_A01733 SM01350 vfu_A01733 vfu_A01735 SM00852 Probable molybdopterin binding domain vfu_A01742 SM00434 DNA Topoisomerase IV vfu_A01751 SM00849 Metallo-beta-lactamase superfamily vfu_A01758 SM00387 Histidine kinase-like ATPases vfu_A01758 SM01049 vfu_A01758 vfu_A01759 SM00421 helix_turn_helix, Lux Regulon vfu_A01759 SM00448 cheY-homologous receiver domain vfu_A01760 SM00347 helix_turn_helix multiple antibiotic resistance protein vfu_A01762 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_A01762 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_A01763 SM00479 vfu_A01763 vfu_A01764 SM00100 Cyclic nucleotide-monophosphate binding domain vfu_A01764 SM00116 Domain in cystathionine beta-synthase and other proteins. vfu_A01770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_A01770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_A01775 SM00382 ATPases associated with a variety of cellular activities vfu_A01781 SM00387 Histidine kinase-like ATPases vfu_A01781 SM00388 His Kinase A (phosphoacceptor) domain vfu_A01781 SM00448 cheY-homologous receiver domain vfu_A01787 SM00091 PAS domain vfu_A01787 SM00382 ATPases associated with a variety of cellular activities vfu_A01794 SM00387 Histidine kinase-like ATPases vfu_A01795 SM00448 cheY-homologous receiver domain vfu_A01802 SM01038 Beta galactosidase small chain vfu_A01804 SM00382 ATPases associated with a variety of cellular activities vfu_A01812 SM00342 helix_turn_helix, arabinose operon control protein vfu_A01813 SM00345 helix_turn_helix gluconate operon transcriptional repressor vfu_A01813 SM00895 vfu_A01813 vfu_A01819 SM00347 helix_turn_helix multiple antibiotic resistance protein vfu_A01824 SM00823 Phosphopantetheine attachment site vfu_A01826 SM00052 Putative diguanylate phosphodiesterase vfu_A01836 SM00420 helix_turn_helix, Deoxyribose operon repressor vfu_A01836 SM01134 vfu_A01836 vfu_A01846 SM00849 Metallo-beta-lactamase superfamily vfu_A01852 SM00028 Tetratricopeptide repeats vfu_A01863 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_A01865 SM01144 vfu_A01865 vfu_A01868 SM00852 Probable molybdopterin binding domain vfu_A01870 SM00382 ATPases associated with a variety of cellular activities vfu_A01874 SM00382 ATPases associated with a variety of cellular activities vfu_A01874 SM00448 cheY-homologous receiver domain vfu_A01875 SM00387 Histidine kinase-like ATPases vfu_A01875 SM00388 His Kinase A (phosphoacceptor) domain vfu_A01884 SM00926 Molybdopterin oxidoreductase Fe4S4 domain vfu_A01894 SM00382 ATPases associated with a variety of cellular activities vfu_A01900 SM00100 Cyclic nucleotide-monophosphate binding domain vfu_A01900 SM00419 helix_turn_helix, cAMP Regulatory protein vfu_A01910 SM00897 FIST N domain vfu_A01910 SM01204 vfu_A01910 vfu_A01911 SM00387 Histidine kinase-like ATPases vfu_A01911 SM00388 His Kinase A (phosphoacceptor) domain vfu_A01911 SM00448 cheY-homologous receiver domain vfu_A01915 SM00530 Helix-turn-helix XRE-family like proteins vfu_A01925 SM00382 ATPases associated with a variety of cellular activities vfu_A01927 SM00981 vfu_A01927 vfu_A01936 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. vfu_A01936 SM00245 tail specific protease vfu_A01937 SM00945 ProQ/FINO family vfu_A01939 SM00382 ATPases associated with a variety of cellular activities vfu_A01963 SM00346 helix_turn_helix isocitrate lyase regulation vfu_A01972 SM00859 Semialdehyde dehydrogenase, NAD binding domain vfu_A01979 SM00382 ATPases associated with a variety of cellular activities vfu_A01979 SM00487 DEAD-like helicases superfamily vfu_A01979 SM00490 helicase superfamily c-terminal domain vfu_A01979 SM00847 Helicase associated domain (HA2) Add an annotation vfu_A01986 SM00267 diguanylate cyclase vfu_A01986 SM01079 vfu_A01986 vfu_A01990 SM00267 diguanylate cyclase vfu_A01992 SM00267 diguanylate cyclase vfu_A01992 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_A02006 SM00062 Bacterial periplasmic substrate-binding proteins vfu_A02009 SM00382 ATPases associated with a variety of cellular activities vfu_A02014 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase vfu_A02023 SM00387 Histidine kinase-like ATPases vfu_A02023 SM00388 His Kinase A (phosphoacceptor) domain vfu_A02024 SM00448 cheY-homologous receiver domain vfu_A02024 SM00862 Transcriptional regulatory protein, C terminal vfu_A02034 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_A02035 SM00990 vfu_A02035 vfu_A02037 SM00267 diguanylate cyclase vfu_A02040 SM00450 Rhodanese Homology Domain vfu_A02051 SM00382 ATPases associated with a variety of cellular activities vfu_A02053 SM00926 Molybdopterin oxidoreductase Fe4S4 domain vfu_A02065 SM00260 Two component signalling adaptor domain vfu_A02065 SM00448 cheY-homologous receiver domain vfu_A02067 SM00448 cheY-homologous receiver domain vfu_A02068 SM00387 Histidine kinase-like ATPases vfu_A02076 SM00028 Tetratricopeptide repeats vfu_A02086 SM01266 vfu_A02086 vfu_A02087 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_A02087 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_A02094 SM00382 ATPases associated with a variety of cellular activities vfu_A02095 SM00354 helix_turn _helix lactose operon repressor vfu_A02105 SM00382 ATPases associated with a variety of cellular activities vfu_A02108 SM00855 Phosphoglycerate mutase family vfu_A02112 SM00903 Flavin reductase like domain vfu_A02120 SM00479 vfu_A02120 vfu_A02125 SM00052 Putative diguanylate phosphodiesterase vfu_A02125 SM00091 PAS domain vfu_A02125 SM00267 diguanylate cyclase vfu_A02131 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) vfu_A02131 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_A02134 SM00411 bacterial (prokaryotic) histone like domain vfu_A02136 SM00873 B3/4 domain vfu_A02136 SM00874 tRNA synthetase B5 domain vfu_A02136 SM00896 Ferredoxin-fold anticodon binding domain vfu_A02139 SM00267 diguanylate cyclase vfu_A02142 SM00278 Helix-hairpin-helix DNA-binding motif class 1 vfu_A02142 SM00465 GIY-YIG type nucleases (URI domain) vfu_A02143 SM00421 helix_turn_helix, Lux Regulon vfu_A02143 SM00448 cheY-homologous receiver domain vfu_A02145 SM00486 DNA polymerase type-B family vfu_A02147 SM00841 Elongation factor P, C-terminal vfu_A02147 SM01185 vfu_A02147 vfu_A02150 SM01022 vfu_A02150 vfu_A02151 SM00345 helix_turn_helix gluconate operon transcriptional repressor vfu_A02151 SM00866 vfu_A02151 vfu_A02164 SM00671 Sel1-like repeats. vfu_A02176 SM01230 vfu_A02176 vfu_A02183 SM00487 DEAD-like helicases superfamily vfu_A02183 SM00490 helicase superfamily c-terminal domain vfu_A02183 SM00847 Helicase associated domain (HA2) Add an annotation vfu_A02184 SM00919 Malic enzyme, NAD binding domain vfu_A02184 SM01274 vfu_A02184 vfu_A02189 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor vfu_A02191 SM00422 helix_turn_helix, mercury resistance vfu_A02201 SM00382 ATPases associated with a variety of cellular activities vfu_A02202 SM00382 ATPases associated with a variety of cellular activities vfu_A02206 SM00363 S4 RNA-binding domain vfu_A02214 SM01119 vfu_A02214 vfu_A02216 SM00481 DNA polymerase alpha chain like domain vfu_A02229 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_A02229 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_A02246 SM00858 vfu_A02246 vfu_A02282 SM00052 Putative diguanylate phosphodiesterase vfu_A02283 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_A02290 SM00382 ATPases associated with a variety of cellular activities vfu_A02291 SM00729 Elongator protein 3, MiaB family, Radical SAM vfu_A02294 SM01266 vfu_A02294 vfu_A02297 SM00387 Histidine kinase-like ATPases vfu_A02298 SM00448 cheY-homologous receiver domain vfu_A02333 SM00420 helix_turn_helix, Deoxyribose operon repressor vfu_A02333 SM01134 vfu_A02333 vfu_A02335 SM00420 helix_turn_helix, Deoxyribose operon repressor vfu_A02335 SM01134 vfu_A02335 vfu_A02337 SM00387 Histidine kinase-like ATPases vfu_A02337 SM00388 His Kinase A (phosphoacceptor) domain vfu_A02337 SM00448 cheY-homologous receiver domain vfu_A02340 SM00028 Tetratricopeptide repeats vfu_A02351 SM00382 ATPases associated with a variety of cellular activities vfu_A02352 SM00278 Helix-hairpin-helix DNA-binding motif class 1 vfu_A02354 SM00840 vfu_A02354 vfu_A02361 SM00491 vfu_A02361 vfu_A02364 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_A02364 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_A02368 SM00062 Bacterial periplasmic substrate-binding proteins vfu_A02368 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. vfu_A02369 SM00382 ATPases associated with a variety of cellular activities vfu_A02376 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_A02376 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_A02382 SM00763 PrkA AAA domain vfu_A02388 SM00382 ATPases associated with a variety of cellular activities vfu_A02389 SM00849 Metallo-beta-lactamase superfamily vfu_A02392 SM00382 ATPases associated with a variety of cellular activities vfu_A02395 SM00487 DEAD-like helicases superfamily vfu_A02395 SM00490 helicase superfamily c-terminal domain vfu_A02395 SM00982 vfu_A02395 vfu_A02395 SM01058 CarD-like/TRCF domain vfu_A02406 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_A02406 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_A02408 SM00345 helix_turn_helix gluconate operon transcriptional repressor vfu_A02411 SM00843 vfu_A02411 vfu_A02412 SM00344 helix_turn_helix ASNC type vfu_A02413 SM01002 Alanine dehydrogenase/PNT, C-terminal domain vfu_A02413 SM01003 Alanine dehydrogenase/PNT, N-terminal domain vfu_A02419 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family vfu_A02420 SM00028 Tetratricopeptide repeats vfu_A02422 SM00411 bacterial (prokaryotic) histone like domain vfu_A02423 SM00316 Ribosomal protein S1-like RNA-binding domain vfu_A02425 SM00278 Helix-hairpin-helix DNA-binding motif class 1 vfu_A02427 SM00411 bacterial (prokaryotic) histone like domain vfu_A02428 SM00382 ATPases associated with a variety of cellular activities vfu_A02428 SM00464 Found in ATP-dependent protease La (LON) vfu_A02429 SM00382 ATPases associated with a variety of cellular activities vfu_A02429 SM00994 ClpX C4-type zinc finger vfu_A02429 SM01086 C-terminal, D2-small domain, of ClpB protein vfu_A02432 SM00387 Histidine kinase-like ATPases vfu_A02432 SM00388 His Kinase A (phosphoacceptor) domain vfu_A02433 SM00382 ATPases associated with a variety of cellular activities vfu_A02433 SM00448 cheY-homologous receiver domain vfu_A02439 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_A02439 SM00387 Histidine kinase-like ATPases vfu_A02439 SM00388 His Kinase A (phosphoacceptor) domain vfu_A02440 SM00448 cheY-homologous receiver domain vfu_A02440 SM00862 Transcriptional regulatory protein, C terminal vfu_A02447 SM00052 Putative diguanylate phosphodiesterase vfu_A02447 SM00267 diguanylate cyclase vfu_A02450 SM00563 Phosphate acyltransferases vfu_A02454 SM00857 Resolvase, N terminal domain vfu_A02456 SM00421 helix_turn_helix, Lux Regulon vfu_A02456 SM00448 cheY-homologous receiver domain vfu_A02457 SM00387 Histidine kinase-like ATPases vfu_A02461 SM00382 ATPases associated with a variety of cellular activities vfu_A02473 SM00474 3'-5' exonuclease vfu_A02479 SM00487 DEAD-like helicases superfamily vfu_A02479 SM00491 vfu_A02479 vfu_A02484 SM00870 vfu_A02484 vfu_A02488 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain vfu_A02543 SM00493 vfu_A02543 vfu_A02545 SM00382 ATPases associated with a variety of cellular activities vfu_A02549 SM00448 cheY-homologous receiver domain vfu_A02558 SM00226 Low molecular weight phosphatase family vfu_A02561 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) vfu_A02561 SM00091 PAS domain vfu_A02561 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_A02572 SM00116 Domain in cystathionine beta-synthase and other proteins. vfu_A02573 SM00267 diguanylate cyclase vfu_A02577 SM00852 Probable molybdopterin binding domain vfu_A02578 SM00729 Elongator protein 3, MiaB family, Radical SAM vfu_A02581 SM00382 ATPases associated with a variety of cellular activities vfu_A02581 SM00448 cheY-homologous receiver domain vfu_A02582 SM00487 DEAD-like helicases superfamily vfu_A02582 SM00490 helicase superfamily c-terminal domain vfu_A02589 SM00900 vfu_A02589 vfu_A02591 SM00478 endonuclease III vfu_A02591 SM00525 vfu_A02591 vfu_A02595 SM00479 vfu_A02595 vfu_A02615 SM00387 Histidine kinase-like ATPases vfu_A02616 SM00862 Transcriptional regulatory protein, C terminal vfu_A02620 SM00116 Domain in cystathionine beta-synthase and other proteins. vfu_A02621 SM00938 Nitrogen regulatory protein P-II vfu_A02627 SM00244 prohibitin homologues vfu_A02629 SM00422 helix_turn_helix, mercury resistance vfu_A02632 SM00278 Helix-hairpin-helix DNA-binding motif class 1 vfu_A02632 SM00292 breast cancer carboxy-terminal domain vfu_A02632 SM00532 Ligase N family vfu_A02633 SM00771 ZipA, C-terminal domain (FtsZ-binding) vfu_A02640 SM00729 Elongator protein 3, MiaB family, Radical SAM vfu_A02643 SM00116 Domain in cystathionine beta-synthase and other proteins. vfu_A02643 SM01091 Transporter associated domain vfu_A02654 SM00936 Penicillin-binding protein 5, C-terminal domain vfu_A02658 SM00729 Elongator protein 3, MiaB family, Radical SAM vfu_A02666 SM00421 helix_turn_helix, Lux Regulon vfu_A02666 SM00448 cheY-homologous receiver domain vfu_A02667 SM00387 Histidine kinase-like ATPases vfu_A02669 SM00642 Alpha-amylase domain vfu_A02672 SM00354 helix_turn _helix lactose operon repressor vfu_A02675 SM00382 ATPases associated with a variety of cellular activities vfu_A02675 SM00930 vfu_A02675 vfu_A02681 SM00028 Tetratricopeptide repeats vfu_A02682 SM00267 diguanylate cyclase vfu_A02685 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs vfu_A02685 SM00475 5'-3' exonuclease vfu_A02691 SM00981 vfu_A02691 vfu_A02696 SM00861 Transketolase, pyrimidine binding domain vfu_A02712 SM01211 vfu_A02712 vfu_A02714 SM00062 Bacterial periplasmic substrate-binding proteins vfu_A02719 SM00829 Enoylreductase vfu_A02727 SM00271 DnaJ molecular chaperone homology domain vfu_A02739 SM00487 DEAD-like helicases superfamily vfu_A02753 SM00862 Transcriptional regulatory protein, C terminal vfu_A02755 SM00495 Chitin-binding domain type 3 vfu_A02767 SM00116 Domain in cystathionine beta-synthase and other proteins. vfu_A02767 SM01240 vfu_A02767 vfu_A02771 SM00382 ATPases associated with a variety of cellular activities vfu_A02772 SM00564 beta-propeller repeat vfu_A02777 SM00530 Helix-turn-helix XRE-family like proteins vfu_A02779 SM00562 vfu_A02779 vfu_A02784 SM00271 DnaJ molecular chaperone homology domain vfu_A02794 SM01323 vfu_A02794 vfu_A02797 SM00116 Domain in cystathionine beta-synthase and other proteins. vfu_A02798 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_A02798 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_A02798 SM01358 vfu_A02798 vfu_A02806 SM00382 ATPases associated with a variety of cellular activities vfu_A02812 SM00091 PAS domain vfu_A02812 SM00387 Histidine kinase-like ATPases vfu_A02812 SM00388 His Kinase A (phosphoacceptor) domain vfu_A02813 SM00448 cheY-homologous receiver domain vfu_A02821 SM00464 Found in ATP-dependent protease La (LON) vfu_A02828 SM00925 MltA specific insert domain vfu_A02852 SM00028 Tetratricopeptide repeats vfu_A02862 SM00858 vfu_A02862 vfu_A02863 SM00382 ATPases associated with a variety of cellular activities vfu_A02866 SM00342 helix_turn_helix, arabinose operon control protein vfu_A02872 SM00838 Elongation factor G C-terminus vfu_A02872 SM00889 Elongation factor G, domain IV vfu_A02873 SM00382 ATPases associated with a variety of cellular activities vfu_A02880 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain vfu_A02881 SM01133 vfu_A02881 vfu_A02891 SM00986 Uracil DNA glycosylase superfamily vfu_A02891 SM00987 UreE urease accessory protein, C-terminal domain vfu_A02893 SM00518 AP endonuclease family 2 vfu_A02901 SM00448 cheY-homologous receiver domain vfu_A02901 SM00862 Transcriptional regulatory protein, C terminal vfu_A02903 SM00073 Histidine Phosphotransfer domain vfu_A02903 SM00091 PAS domain vfu_A02903 SM00387 Histidine kinase-like ATPases vfu_A02903 SM00388 His Kinase A (phosphoacceptor) domain vfu_A02903 SM00448 cheY-homologous receiver domain vfu_A02904 SM00091 PAS domain vfu_A02904 SM00267 diguanylate cyclase vfu_A02905 SM00729 Elongator protein 3, MiaB family, Radical SAM vfu_A02921 SM00851 MGS-like domain vfu_A02921 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain vfu_A02922 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain vfu_A02925 SM00957 SecA DEAD-like domain vfu_A02925 SM00958 SecA preprotein cross-linking domain vfu_A02928 SM00864 Tubulin/FtsZ family, GTPase domain vfu_A02928 SM00865 Tubulin/FtsZ family, C-terminal domain vfu_A02929 SM00842 Cell division protein FtsA vfu_A02945 SM00749 bacterial OsmY and nodulation domain vfu_A02955 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. vfu_A02956 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. vfu_A02961 SM00382 ATPases associated with a variety of cellular activities vfu_A02961 SM00962 SRP54-type protein, GTPase domain vfu_A02961 SM00963 SRP54-type protein, helical bundle domain vfu_A02964 SM01091 Transporter associated domain vfu_A02970 SM00829 Enoylreductase vfu_A02977 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain vfu_A02979 SM00382 ATPases associated with a variety of cellular activities vfu_A02981 SM00533 DNA-binding domain of DNA mismatch repair MUTS family vfu_A02981 SM00534 ATPase domain of DNA mismatch repair MUTS family vfu_A02983 SM00257 Lysin motif vfu_A02992 SM00905 Dihydroneopterin aldolase vfu_A02993 SM01207 vfu_A02993 vfu_A02998 SM00400 zinc finger vfu_A02998 SM00493 vfu_A02998 vfu_A02998 SM00766 DNA primase DnaG DnaB-binding vfu_A03008 SM00482 DNA polymerase A domain vfu_A03017 SM00354 helix_turn _helix lactose operon repressor vfu_A03019 SM00116 Domain in cystathionine beta-synthase and other proteins. vfu_A03019 SM00924 MgtE intracellular N domain vfu_A03022 SM00563 Phosphate acyltransferases vfu_A03024 SM00420 helix_turn_helix, Deoxyribose operon repressor vfu_A03024 SM01134 vfu_A03024 vfu_A03028 SM00267 diguanylate cyclase vfu_A03037 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain vfu_A03040 SM00861 Transketolase, pyrimidine binding domain vfu_A03043 SM00731 SprT homologues. vfu_A03048 SM00732 Likely ribonuclease with RNase H fold. vfu_A03054 SM01152 vfu_A03054 vfu_A03057 SM00729 Elongator protein 3, MiaB family, Radical SAM vfu_A03060 SM00478 endonuclease III vfu_A03061 SM00382 ATPases associated with a variety of cellular activities vfu_A03068 SM00271 DnaJ molecular chaperone homology domain vfu_A03072 SM00650 Ribosomal RNA adenine dimethylases vfu_A03097 SM00316 Ribosomal protein S1-like RNA-binding domain vfu_A03112 SM00382 ATPases associated with a variety of cellular activities vfu_A03113 SM00028 Tetratricopeptide repeats vfu_A03115 SM00965 Secretin and TonB N terminus short domain vfu_A03119 SM00052 Putative diguanylate phosphodiesterase vfu_A03119 SM00267 diguanylate cyclase vfu_A03121 SM00421 helix_turn_helix, Lux Regulon vfu_A03127 SM01018 B12 binding domain vfu_A03146 SM01005 Alanine racemase, C-terminal domain vfu_B00015 SM00345 helix_turn_helix gluconate operon transcriptional repressor vfu_B00021 SM01266 vfu_B00021 vfu_B00023 SM00420 helix_turn_helix, Deoxyribose operon repressor vfu_B00023 SM01134 vfu_B00023 vfu_B00034 SM00788 Adenylosuccinate synthetase vfu_B00039 SM00316 Ribosomal protein S1-like RNA-binding domain vfu_B00039 SM00357 Cold shock protein domain vfu_B00039 SM00955 vfu_B00039 vfu_B00040 SM00487 DEAD-like helicases superfamily vfu_B00040 SM00490 helicase superfamily c-terminal domain vfu_B00041 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain vfu_B00055 SM00422 helix_turn_helix, mercury resistance vfu_B00068 SM01118 vfu_B00068 vfu_B00069 SM00822 vfu_B00069 vfu_B00076 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain vfu_B00095 SM00861 Transketolase, pyrimidine binding domain vfu_B00098 SM00450 Rhodanese Homology Domain vfu_B00100 SM00852 Probable molybdopterin binding domain vfu_B00105 SM00342 helix_turn_helix, arabinose operon control protein vfu_B00113 SM00357 Cold shock protein domain vfu_B00118 SM00382 ATPases associated with a variety of cellular activities vfu_B00120 SM00345 helix_turn_helix gluconate operon transcriptional repressor vfu_B00120 SM00866 vfu_B00120 vfu_B00122 SM00631 vfu_B00122 vfu_B00130 SM00382 ATPases associated with a variety of cellular activities vfu_B00134 SM00062 Bacterial periplasmic substrate-binding proteins vfu_B00134 SM00387 Histidine kinase-like ATPases vfu_B00134 SM00388 His Kinase A (phosphoacceptor) domain vfu_B00134 SM00448 cheY-homologous receiver domain vfu_B00135 SM00052 Putative diguanylate phosphodiesterase vfu_B00135 SM00448 cheY-homologous receiver domain vfu_B00136 SM00421 helix_turn_helix, Lux Regulon vfu_B00136 SM00448 cheY-homologous receiver domain vfu_B00138 SM00267 diguanylate cyclase vfu_B00140 SM00421 helix_turn_helix, Lux Regulon vfu_B00142 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B00142 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_B00146 SM00990 vfu_B00146 vfu_B00153 SM00862 Transcriptional regulatory protein, C terminal vfu_B00156 SM00466 SET and RING finger associated domain. Domain of unknown function in SET domain containing proteins and in Deinococcus radiodurans DRA1533. vfu_B00156 SM00507 HNH nucleases vfu_B00163 SM00342 helix_turn_helix, arabinose operon control protein vfu_B00163 SM00871 Bacterial transcription activator, effector binding domain vfu_B00169 SM00345 helix_turn_helix gluconate operon transcriptional repressor vfu_B00169 SM00895 vfu_B00169 vfu_B00171 SM00062 Bacterial periplasmic substrate-binding proteins vfu_B00174 SM00382 ATPases associated with a variety of cellular activities vfu_B00188 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain vfu_B00189 SM01092 CO dehydrogenase flavoprotein C-terminal domain vfu_B00193 SM00382 ATPases associated with a variety of cellular activities vfu_B00196 SM00267 diguanylate cyclase vfu_B00198 SM00267 diguanylate cyclase vfu_B00201 SM01003 Alanine dehydrogenase/PNT, N-terminal domain vfu_B00202 SM01002 Alanine dehydrogenase/PNT, C-terminal domain vfu_B00204 SM00387 Histidine kinase-like ATPases vfu_B00204 SM00388 His Kinase A (phosphoacceptor) domain vfu_B00205 SM00448 cheY-homologous receiver domain vfu_B00205 SM00862 Transcriptional regulatory protein, C terminal vfu_B00214 SM00530 Helix-turn-helix XRE-family like proteins vfu_B00220 SM00530 Helix-turn-helix XRE-family like proteins vfu_B00229 SM00881 CoA binding domain vfu_B00245 SM00116 Domain in cystathionine beta-synthase and other proteins. vfu_B00246 SM00867 YceI-like domain vfu_B00252 SM00052 Putative diguanylate phosphodiesterase vfu_B00253 SM00267 diguanylate cyclase vfu_B00258 SM00387 Histidine kinase-like ATPases vfu_B00258 SM00388 His Kinase A (phosphoacceptor) domain vfu_B00259 SM00448 cheY-homologous receiver domain vfu_B00259 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. vfu_B00261 SM00342 helix_turn_helix, arabinose operon control protein vfu_B00262 SM00829 Enoylreductase vfu_B00264 SM00347 helix_turn_helix multiple antibiotic resistance protein vfu_B00266 SM00833 Cobalamin synthesis protein cobW C-terminal domain vfu_B00270 SM00387 Histidine kinase-like ATPases vfu_B00270 SM00448 cheY-homologous receiver domain vfu_B00273 SM00354 helix_turn _helix lactose operon repressor vfu_B00287 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor vfu_B00289 SM00450 Rhodanese Homology Domain vfu_B00294 SM00267 diguanylate cyclase vfu_B00294 SM00448 cheY-homologous receiver domain vfu_B00297 SM00091 PAS domain vfu_B00297 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B00303 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B00303 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_B00308 SM00421 helix_turn_helix, Lux Regulon vfu_B00308 SM00448 cheY-homologous receiver domain vfu_B00309 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_B00309 SM00387 Histidine kinase-like ATPases vfu_B00312 SM00926 Molybdopterin oxidoreductase Fe4S4 domain vfu_B00321 SM00822 vfu_B00321 vfu_B00328 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) vfu_B00328 SM00267 diguanylate cyclase vfu_B00330 SM00495 Chitin-binding domain type 3 vfu_B00330 SM00636 vfu_B00330 vfu_B00331 SM00342 helix_turn_helix, arabinose operon control protein vfu_B00334 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_B00334 SM00387 Histidine kinase-like ATPases vfu_B00334 SM00388 His Kinase A (phosphoacceptor) domain vfu_B00334 SM00448 cheY-homologous receiver domain vfu_B00336 SM00851 MGS-like domain vfu_B00340 SM00327 von Willebrand factor (vWF) type A domain vfu_B00345 SM00052 Putative diguanylate phosphodiesterase vfu_B00345 SM00267 diguanylate cyclase vfu_B00346 SM00382 ATPases associated with a variety of cellular activities vfu_B00351 SM00382 ATPases associated with a variety of cellular activities vfu_B00358 SM00387 Histidine kinase-like ATPases vfu_B00358 SM00388 His Kinase A (phosphoacceptor) domain vfu_B00358 SM00448 cheY-homologous receiver domain vfu_B00391 SM01252 vfu_B00391 vfu_B00451 SM00062 Bacterial periplasmic substrate-binding proteins vfu_B00451 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. vfu_B00452 SM00382 ATPases associated with a variety of cellular activities vfu_B00455 SM00895 vfu_B00455 vfu_B00458 SM00382 ATPases associated with a variety of cellular activities vfu_B00459 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B00459 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_B00460 SM01005 Alanine racemase, C-terminal domain vfu_B00483 SM00244 prohibitin homologues vfu_B00487 SM00342 helix_turn_helix, arabinose operon control protein vfu_B00492 SM00342 helix_turn_helix, arabinose operon control protein vfu_B00493 SM00382 ATPases associated with a variety of cellular activities vfu_B00499 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins vfu_B00502 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B00502 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_B00503 SM00344 helix_turn_helix ASNC type vfu_B00509 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B00509 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_B00514 SM00448 cheY-homologous receiver domain vfu_B00514 SM00850 LytTr DNA-binding domain vfu_B00519 SM00642 Alpha-amylase domain vfu_B00524 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. vfu_B00526 SM01064 Cellulose or protein binding domain vfu_B00530 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B00535 SM00354 helix_turn _helix lactose operon repressor vfu_B00536 SM00382 ATPases associated with a variety of cellular activities vfu_B00541 SM00342 helix_turn_helix, arabinose operon control protein vfu_B00551 SM00382 ATPases associated with a variety of cellular activities vfu_B00552 SM00382 ATPases associated with a variety of cellular activities vfu_B00554 SM00052 Putative diguanylate phosphodiesterase vfu_B00561 SM00357 Cold shock protein domain vfu_B00562 SM00829 Enoylreductase vfu_B00565 SM00382 ATPases associated with a variety of cellular activities vfu_B00571 SM00481 DNA polymerase alpha chain like domain vfu_B00574 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. vfu_B00577 SM01350 vfu_B00577 vfu_B00580 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B00580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_B00582 SM00849 Metallo-beta-lactamase superfamily vfu_B00587 SM00729 Elongator protein 3, MiaB family, Radical SAM vfu_B00598 SM00862 Transcriptional regulatory protein, C terminal vfu_B00600 SM00862 Transcriptional regulatory protein, C terminal vfu_B00614 SM00936 Penicillin-binding protein 5, C-terminal domain vfu_B00615 SM00382 ATPases associated with a variety of cellular activities vfu_B00617 SM00062 Bacterial periplasmic substrate-binding proteins vfu_B00619 SM00344 helix_turn_helix ASNC type vfu_B00622 SM00028 Tetratricopeptide repeats vfu_B00623 SM00382 ATPases associated with a variety of cellular activities vfu_B00626 SM00347 helix_turn_helix multiple antibiotic resistance protein vfu_B00627 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B00627 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_B00629 SM00924 MgtE intracellular N domain vfu_B00630 SM00883 Chaperonin 10 Kd subunit vfu_B00633 SM01004 Delta-aminolevulinic acid dehydratase vfu_B00634 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) vfu_B00634 SM00267 diguanylate cyclase vfu_B00635 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. vfu_B00644 SM00342 helix_turn_helix, arabinose operon control protein vfu_B00644 SM00871 Bacterial transcription activator, effector binding domain vfu_B00646 SM00342 helix_turn_helix, arabinose operon control protein vfu_B00653 SM00387 Histidine kinase-like ATPases vfu_B00653 SM00388 His Kinase A (phosphoacceptor) domain vfu_B00654 SM00448 cheY-homologous receiver domain vfu_B00654 SM00862 Transcriptional regulatory protein, C terminal vfu_B00656 SM00822 vfu_B00656 vfu_B00657 SM01236 vfu_B00657 vfu_B00663 SM01240 vfu_B00663 vfu_B00668 SM00862 Transcriptional regulatory protein, C terminal vfu_B00669 SM00421 helix_turn_helix, Lux Regulon vfu_B00669 SM00448 cheY-homologous receiver domain vfu_B00670 SM00062 Bacterial periplasmic substrate-binding proteins vfu_B00670 SM00387 Histidine kinase-like ATPases vfu_B00670 SM00388 His Kinase A (phosphoacceptor) domain vfu_B00670 SM00448 cheY-homologous receiver domain vfu_B00671 SM00052 Putative diguanylate phosphodiesterase vfu_B00673 SM00448 cheY-homologous receiver domain vfu_B00679 SM00357 Cold shock protein domain vfu_B00680 SM01322 vfu_B00680 vfu_B00681 SM00267 diguanylate cyclase vfu_B00683 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. vfu_B00683 SM00382 ATPases associated with a variety of cellular activities vfu_B00689 SM00642 Alpha-amylase domain vfu_B00692 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B00692 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_B00696 SM00327 von Willebrand factor (vWF) type A domain vfu_B00697 SM00028 Tetratricopeptide repeats vfu_B00700 SM00267 diguanylate cyclase vfu_B00704 SM00091 PAS domain vfu_B00704 SM00387 Histidine kinase-like ATPases vfu_B00704 SM00388 His Kinase A (phosphoacceptor) domain vfu_B00704 SM00448 cheY-homologous receiver domain vfu_B00704 SM01079 vfu_B00704 vfu_B00705 SM00267 diguanylate cyclase vfu_B00705 SM00448 cheY-homologous receiver domain vfu_B00712 SM00342 helix_turn_helix, arabinose operon control protein vfu_B00713 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain vfu_B00717 SM00062 Bacterial periplasmic substrate-binding proteins vfu_B00729 SM00382 ATPases associated with a variety of cellular activities vfu_B00729 SM00448 cheY-homologous receiver domain vfu_B00730 SM00421 helix_turn_helix, Lux Regulon vfu_B00731 SM00344 helix_turn_helix ASNC type vfu_B00735 SM00917 LeuA allosteric (dimerisation) domain vfu_B00736 SM00342 helix_turn_helix, arabinose operon control protein vfu_B00738 SM00342 helix_turn_helix, arabinose operon control protein vfu_B00740 SM00382 ATPases associated with a variety of cellular activities vfu_B00746 SM00342 helix_turn_helix, arabinose operon control protein vfu_B00759 SM00260 Two component signalling adaptor domain vfu_B00759 SM00448 cheY-homologous receiver domain vfu_B00761 SM00347 helix_turn_helix multiple antibiotic resistance protein vfu_B00763 SM00267 diguanylate cyclase vfu_B00767 SM00267 diguanylate cyclase vfu_B00767 SM01079 vfu_B00767 vfu_B00772 SM00267 diguanylate cyclase vfu_B00775 SM00448 cheY-homologous receiver domain vfu_B00775 SM00862 Transcriptional regulatory protein, C terminal vfu_B00777 SM00387 Histidine kinase-like ATPases vfu_B00777 SM00388 His Kinase A (phosphoacceptor) domain vfu_B00784 SM00240 Forkhead associated domain vfu_B00786 SM00382 ATPases associated with a variety of cellular activities vfu_B00786 SM01086 C-terminal, D2-small domain, of ClpB protein vfu_B00809 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B00809 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_B00812 SM00382 ATPases associated with a variety of cellular activities vfu_B00819 SM00342 helix_turn_helix, arabinose operon control protein vfu_B00828 SM00507 HNH nucleases vfu_B00837 SM00382 ATPases associated with a variety of cellular activities vfu_B00851 SM00062 Bacterial periplasmic substrate-binding proteins vfu_B00852 SM00347 helix_turn_helix multiple antibiotic resistance protein vfu_B00857 SM00342 helix_turn_helix, arabinose operon control protein vfu_B00863 SM00342 helix_turn_helix, arabinose operon control protein vfu_B00863 SM01009 AlkA N-terminal domain vfu_B00870 SM01154 vfu_B00870 vfu_B00883 SM01120 vfu_B00883 vfu_B00895 SM00926 Molybdopterin oxidoreductase Fe4S4 domain vfu_B00901 SM00479 vfu_B00901 vfu_B00912 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor vfu_B00912 SM00450 Rhodanese Homology Domain vfu_B00919 SM00354 helix_turn _helix lactose operon repressor vfu_B00923 SM00822 vfu_B00923 vfu_B00928 SM00267 diguanylate cyclase vfu_B00929 SM00345 helix_turn_helix gluconate operon transcriptional repressor vfu_B00934 SM00450 Rhodanese Homology Domain vfu_B00936 SM00342 helix_turn_helix, arabinose operon control protein vfu_B00938 SM00342 helix_turn_helix, arabinose operon control protein vfu_B00943 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) vfu_B00943 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B00944 SM00420 helix_turn_helix, Deoxyribose operon repressor vfu_B00944 SM01134 vfu_B00944 vfu_B00947 SM01007 Class II Aldolase and Adducin N-terminal domain vfu_B00951 SM00344 helix_turn_helix ASNC type vfu_B00953 SM00360 RNA recognition motif vfu_B00954 SM00422 helix_turn_helix, mercury resistance vfu_B00955 SM00347 helix_turn_helix multiple antibiotic resistance protein vfu_B00959 SM00487 DEAD-like helicases superfamily vfu_B00959 SM00490 helicase superfamily c-terminal domain vfu_B00962 SM00344 helix_turn_helix ASNC type vfu_B00963 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B00963 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_B00968 SM00342 helix_turn_helix, arabinose operon control protein vfu_B00971 SM00421 helix_turn_helix, Lux Regulon vfu_B00974 SM00331 Sigma factor PP2C-like phosphatases vfu_B00974 SM00448 cheY-homologous receiver domain vfu_B00976 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B00977 SM00448 cheY-homologous receiver domain vfu_B00979 SM00138 Methyltransferase, chemotaxis proteins vfu_B00980 SM00091 PAS domain vfu_B00980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B00980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_B00981 SM00260 Two component signalling adaptor domain vfu_B00982 SM00260 Two component signalling adaptor domain vfu_B00983 SM00073 Histidine Phosphotransfer domain vfu_B00983 SM00260 Two component signalling adaptor domain vfu_B00983 SM00387 Histidine kinase-like ATPases vfu_B00983 SM01231 vfu_B00983 vfu_B00984 SM00448 cheY-homologous receiver domain vfu_B00988 SM00470 ParB-like nuclease domain vfu_B00998 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B00998 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_B00998 SM01049 vfu_B00998 vfu_B01006 SM00421 helix_turn_helix, Lux Regulon vfu_B01009 SM00642 Alpha-amylase domain vfu_B01022 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. vfu_B01027 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins vfu_B01027 SM00495 Chitin-binding domain type 3 vfu_B01027 SM00636 vfu_B01027 vfu_B01029 SM00345 helix_turn_helix gluconate operon transcriptional repressor vfu_B01030 SM00382 ATPases associated with a variety of cellular activities vfu_B01032 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B01032 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_B01035 SM00926 Molybdopterin oxidoreductase Fe4S4 domain vfu_B01037 SM00014 Acid phosphatase homologues vfu_B01039 SM00382 ATPases associated with a variety of cellular activities vfu_B01040 SM00642 Alpha-amylase domain vfu_B01043 SM00671 Sel1-like repeats. vfu_B01059 SM00267 diguanylate cyclase vfu_B01064 SM00422 helix_turn_helix, mercury resistance vfu_B01066 SM00257 Lysin motif vfu_B01068 SM00487 DEAD-like helicases superfamily vfu_B01068 SM00490 helicase superfamily c-terminal domain vfu_B01069 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B01069 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_B01073 SM00382 ATPases associated with a variety of cellular activities vfu_B01074 SM00267 diguanylate cyclase vfu_B01081 SM00052 Putative diguanylate phosphodiesterase vfu_B01081 SM00267 diguanylate cyclase vfu_B01090 SM00347 helix_turn_helix multiple antibiotic resistance protein vfu_B01095 SM00342 helix_turn_helix, arabinose operon control protein vfu_B01113 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. vfu_B01113 SM00267 diguanylate cyclase vfu_B01118 SM00342 helix_turn_helix, arabinose operon control protein vfu_B01121 SM00345 helix_turn_helix gluconate operon transcriptional repressor vfu_B01125 SM00458 Ricin-type beta-trefoil vfu_B01130 SM00420 helix_turn_helix, Deoxyribose operon repressor vfu_B01130 SM01134 vfu_B01130 vfu_B01133 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B01136 SM00421 helix_turn_helix, Lux Regulon vfu_B01138 SM00862 Transcriptional regulatory protein, C terminal vfu_B01144 SM00450 Rhodanese Homology Domain vfu_B01145 SM00342 helix_turn_helix, arabinose operon control protein vfu_B01152 SM00052 Putative diguanylate phosphodiesterase vfu_B01154 SM00382 ATPases associated with a variety of cellular activities vfu_B01159 SM00345 helix_turn_helix gluconate operon transcriptional repressor vfu_B01159 SM00866 vfu_B01159 vfu_B01164 SM00829 Enoylreductase vfu_B01169 SM00347 helix_turn_helix multiple antibiotic resistance protein vfu_B01171 SM00344 helix_turn_helix ASNC type vfu_B01185 SM00382 ATPases associated with a variety of cellular activities vfu_B01185 SM01086 C-terminal, D2-small domain, of ClpB protein vfu_B01186 SM00382 ATPases associated with a variety of cellular activities vfu_B01196 SM00382 ATPases associated with a variety of cellular activities vfu_B01200 SM00354 helix_turn _helix lactose operon repressor vfu_B01206 SM00091 PAS domain vfu_B01206 SM00267 diguanylate cyclase vfu_B01207 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B01209 SM00495 Chitin-binding domain type 3 vfu_B01210 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) vfu_B01210 SM00091 PAS domain vfu_B01210 SM00387 Histidine kinase-like ATPases vfu_B01211 SM00345 helix_turn_helix gluconate operon transcriptional repressor vfu_B01211 SM00866 vfu_B01211 vfu_B01213 SM00872 Alpha mannosidase, middle domain vfu_B01222 SM00382 ATPases associated with a variety of cellular activities vfu_B01228 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B01232 SM00342 helix_turn_helix, arabinose operon control protein vfu_B01233 SM01007 Class II Aldolase and Adducin N-terminal domain vfu_B01246 SM00346 helix_turn_helix isocitrate lyase regulation vfu_B01247 SM00116 Domain in cystathionine beta-synthase and other proteins. vfu_B01248 SM00479 vfu_B01248 vfu_B01249 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. vfu_B01253 SM00345 helix_turn_helix gluconate operon transcriptional repressor vfu_B01261 SM00382 ATPases associated with a variety of cellular activities vfu_B01268 SM00421 helix_turn_helix, Lux Regulon vfu_B01269 SM00420 helix_turn_helix, Deoxyribose operon repressor vfu_B01269 SM01134 vfu_B01269 vfu_B01271 SM00342 helix_turn_helix, arabinose operon control protein vfu_B01282 SM00382 ATPases associated with a variety of cellular activities vfu_B01288 SM00729 Elongator protein 3, MiaB family, Radical SAM vfu_B01291 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B01291 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_B01293 SM00344 helix_turn_helix ASNC type vfu_B01299 SM00052 Putative diguanylate phosphodiesterase vfu_B01301 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain vfu_B01304 SM00387 Histidine kinase-like ATPases vfu_B01304 SM00388 His Kinase A (phosphoacceptor) domain vfu_B01304 SM00448 cheY-homologous receiver domain vfu_B01305 SM00052 Putative diguanylate phosphodiesterase vfu_B01305 SM00267 diguanylate cyclase vfu_B01311 SM01266 vfu_B01311 vfu_B01326 SM00382 ATPases associated with a variety of cellular activities vfu_B01334 SM01057 Eukaryotic-type carbonic anhydrase vfu_B01340 SM00487 DEAD-like helicases superfamily vfu_B01340 SM00490 helicase superfamily c-terminal domain vfu_B01341 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor vfu_B01341 SM00448 cheY-homologous receiver domain vfu_B01342 SM00387 Histidine kinase-like ATPases vfu_B01342 SM00388 His Kinase A (phosphoacceptor) domain vfu_B01343 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B01354 SM00357 Cold shock protein domain vfu_B01365 SM00530 Helix-turn-helix XRE-family like proteins vfu_B01367 SM00267 diguanylate cyclase vfu_B01368 SM00052 Putative diguanylate phosphodiesterase vfu_B01368 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) vfu_B01368 SM00091 PAS domain vfu_B01368 SM00267 diguanylate cyclase vfu_B01378 SM00271 DnaJ molecular chaperone homology domain vfu_B01380 SM00052 Putative diguanylate phosphodiesterase vfu_B01380 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. vfu_B01380 SM00267 diguanylate cyclase vfu_B01383 SM00382 ATPases associated with a variety of cellular activities vfu_B01387 SM00797 Allophanate hydrolase subunit 2 vfu_B01388 SM00796 Allophanate hydrolase subunit 1 vfu_B01391 SM00091 PAS domain vfu_B01391 SM00267 diguanylate cyclase vfu_B01391 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_B01393 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B01397 SM00487 DEAD-like helicases superfamily vfu_B01397 SM00490 helicase superfamily c-terminal domain vfu_B01402 SM00382 ATPases associated with a variety of cellular activities vfu_B01403 SM00327 von Willebrand factor (vWF) type A domain vfu_B01406 SM00342 helix_turn_helix, arabinose operon control protein vfu_B01408 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B01409 SM00880 vfu_B01409 vfu_B01414 SM00855 Phosphoglycerate mutase family vfu_B01415 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. vfu_B01417 SM00342 helix_turn_helix, arabinose operon control protein vfu_B01427 SM00422 helix_turn_helix, mercury resistance vfu_B01434 SM00822 vfu_B01434 vfu_B01435 SM00882 Coenzyme A transferase vfu_B01436 SM00822 vfu_B01436 vfu_B01437 SM00342 helix_turn_helix, arabinose operon control protein vfu_B01443 SM00387 Histidine kinase-like ATPases vfu_B01443 SM01049 vfu_B01443 vfu_B01444 SM00421 helix_turn_helix, Lux Regulon vfu_B01444 SM00448 cheY-homologous receiver domain vfu_B01451 SM00342 helix_turn_helix, arabinose operon control protein vfu_B01456 SM00382 ATPases associated with a variety of cellular activities vfu_B01460 SM00893 Electron transfer flavoprotein domain vfu_B01461 SM00893 Electron transfer flavoprotein domain vfu_B01464 SM00861 Transketolase, pyrimidine binding domain vfu_B01466 SM00052 Putative diguanylate phosphodiesterase vfu_B01466 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) vfu_B01466 SM00091 PAS domain vfu_B01466 SM00267 diguanylate cyclase vfu_B01470 SM00345 helix_turn_helix gluconate operon transcriptional repressor vfu_B01470 SM00895 vfu_B01470 vfu_B01472 SM00858 vfu_B01472 vfu_B01491 SM00342 helix_turn_helix, arabinose operon control protein vfu_B01498 SM01005 Alanine racemase, C-terminal domain vfu_B01500 SM00342 helix_turn_helix, arabinose operon control protein vfu_B01503 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). vfu_B01503 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain vfu_B01504 SM00342 helix_turn_helix, arabinose operon control protein vfu_B01510 SM00382 ATPases associated with a variety of cellular activities